BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 012245
         (467 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255586057|ref|XP_002533695.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526406|gb|EEF28690.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 478

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/487 (69%), Positives = 377/487 (77%), Gaps = 34/487 (6%)

Query: 1   MEMNGSKREENEKMEEC-KETVVYMWGYLPGTSPEKSPILSPIPARLCGG---DSWKDVC 56
           M +NG+  EE+ KMEEC K T VYM GYLPG SPEKSPILSPI   +  G   DSWKDVC
Sbjct: 1   MAINGNGEEEDVKMEECCKVTAVYMCGYLPGISPEKSPILSPIQVPISDGGGFDSWKDVC 60

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            GGCGFA+A S SG LITWGS D+EGQSYLTSGKHGE PEPFPLP EASVVKAAAGWAHC
Sbjct: 61  SGGCGFAMAISGSGNLITWGSTDEEGQSYLTSGKHGEIPEPFPLPCEASVVKAAAGWAHC 120

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS-------- 168
           VSVTE GEV+TWGW+ECVPS K+          Q+D+TGKQ+AL   +   S        
Sbjct: 121 VSVTETGEVFTWGWKECVPSVKI---------IQRDNTGKQNALLQTEKVSSRSEGSSLT 171

Query: 169 --------DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                    KR G+E+VKRR+ S  +E+ E+  SGDEFFT+ P +VTL PGV+IT VAAG
Sbjct: 172 RGTVLNSDSKRTGDEIVKRRRVSPTKEDFESSPSGDEFFTVLPLMVTLAPGVRITNVAAG 231

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
           GRHTL LSDMGQVWGWGYGGEGQLGLGSRIKMV +PHLIPC++ +ASGKDR L+V QG++
Sbjct: 232 GRHTLALSDMGQVWGWGYGGEGQLGLGSRIKMVSSPHLIPCIDASASGKDRSLIVHQGNL 291

Query: 281 NSSGKAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
             S +A     SYVKEIACGGRHSA+VTD GALLTFGWGLYGQCG G+TNDQLRP+   +
Sbjct: 292 TPSAQASTFPGSYVKEIACGGRHSAIVTDTGALLTFGWGLYGQCGQGTTNDQLRPACVPA 351

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           L  I+V  IAAGLWHTVCIS +G VY FGGNQFGQLGT  DQ E  PK L  P L SK A
Sbjct: 352 LSGIKVISIAAGLWHTVCISADGHVYTFGGNQFGQLGTDTDQTE--PKQLYAPSLGSKHA 409

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWH 457
           K+VSCGARHSAVLTEDGQV SWGWNKYGQLGLGDSIDRNIPS VPI G+ P+NIACGWWH
Sbjct: 410 KIVSCGARHSAVLTEDGQVYSWGWNKYGQLGLGDSIDRNIPSQVPIEGYRPKNIACGWWH 469

Query: 458 TLLLAET 464
           TLLLAET
Sbjct: 470 TLLLAET 476


>gi|449448608|ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 485

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/480 (66%), Positives = 359/480 (74%), Gaps = 17/480 (3%)

Query: 1   MEMNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVC 56
           M+   +      KM    + +VYMWGYLPG  P+KS +L P P RL     GGDSWK+VC
Sbjct: 1   MKEENAADHNGAKMANKIDALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVC 60

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
           GGGCGFA+A S+SGKLITWG+AD+EGQ +LTSGKHGE PE FP PTE  VVKA AGWAHC
Sbjct: 61  GGGCGFAMAISDSGKLITWGAADEEGQIFLTSGKHGEIPEAFPFPTEDLVVKAVAGWAHC 120

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD------- 169
           VSVTEAGEVYTWGW EC+PS K  RD    G   KDSTGKQS    EQA P D       
Sbjct: 121 VSVTEAGEVYTWGWSECIPSMKTLRDLAIGGGLLKDSTGKQSLTTAEQAGPQDSNGVDRM 180

Query: 170 ------KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
                 KR GEE  KRRK +S +E++E  + GD+ FT  PCLV   PGVKI  VAAGGRH
Sbjct: 181 DSQLDNKRVGEETAKRRKINSVKEDTEISSPGDDLFTTLPCLVNFGPGVKIAAVAAGGRH 240

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           TL LSDMGQVWGWG+GGEGQLGLG+R+KMV +PH+IPC+E  AS KDR  ++ Q S  ++
Sbjct: 241 TLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPCIELPASAKDRSSVIYQASKAAA 300

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
           GK   +YVK IACGGRHS VVTD GALLTFGWGLYGQCG G+TND LRP+  SSL   QV
Sbjct: 301 GKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTNDLLRPTCVSSLSSTQV 360

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           E I+AGLWHTVCI+ EG VY FGGNQFGQLGTG DQ E +P+LL+ PILE K AK VSCG
Sbjct: 361 ESISAGLWHTVCITAEGLVYAFGGNQFGQLGTGTDQGETIPRLLDAPILEGKCAKRVSCG 420

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           ARH+ VLT+DGQ+ SWGWNKYGQLGLGDSIDRNIPS V I G LPRNI CGWWHTL+LAE
Sbjct: 421 ARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRNIPSKVSIDGCLPRNIVCGWWHTLMLAE 480


>gi|449519078|ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 472

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/467 (67%), Positives = 355/467 (76%), Gaps = 17/467 (3%)

Query: 14  MEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSES 69
           M    + +VYMWGYLPG  P+KS +L P P RL     GGDSWK+VCGGGCGFA+A S+S
Sbjct: 1   MANKIDALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVCGGGCGFAMAISDS 60

Query: 70  GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           GKLITWG+AD+EGQ +LTSGKHGE PE FP PTE  VVKA AGWAHCVSVTEAGEVYTWG
Sbjct: 61  GKLITWGAADEEGQIFLTSGKHGEIPEAFPFPTEDLVVKAVAGWAHCVSVTEAGEVYTWG 120

Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD-------------KRAGEEV 176
           W EC+PS K  RD    G   KDSTGKQS    EQA P D             KR GEE 
Sbjct: 121 WSECIPSMKTLRDLAIGGGLLKDSTGKQSLTTAEQAGPQDSNGVDRMDSQLDNKRVGEET 180

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
            KRRK +S +E++E  + GD+ FT  PCLV   PGVKI  VAAGGRHTL LSDMGQVWGW
Sbjct: 181 AKRRKINSVKEDTEISSPGDDLFTTLPCLVNFGPGVKIAAVAAGGRHTLALSDMGQVWGW 240

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G+GGEGQLGLG+R+KMV +PH+IPC+E  AS KDR  ++ Q S  ++GK   +YVK IAC
Sbjct: 241 GHGGEGQLGLGTRVKMVSSPHIIPCIELPASAKDRSSVIYQASKAAAGKVLGNYVKGIAC 300

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           GGRHS VVTD GALLTFGWGLYGQCG G+TND LRP+  SSL   QVE I+AGLWHTVCI
Sbjct: 301 GGRHSVVVTDTGALLTFGWGLYGQCGQGNTNDLLRPTCVSSLSSTQVESISAGLWHTVCI 360

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + EG VY FGGNQFGQLGTG DQ E +P+LL+ PILE K AK VSCGARH+ VLT+DGQ+
Sbjct: 361 TAEGLVYAFGGNQFGQLGTGTDQGETIPRLLDAPILEGKCAKRVSCGARHNVVLTDDGQL 420

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
            SWGWNKYGQLGLGDSIDRNIPS V I G LPRNI CGWWHTL+LAE
Sbjct: 421 FSWGWNKYGQLGLGDSIDRNIPSKVSIDGCLPRNIVCGWWHTLMLAE 467


>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
 gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
          Length = 467

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 316/465 (67%), Positives = 362/465 (77%), Gaps = 17/465 (3%)

Query: 7   KREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL-CGGDSWKDVCGGGCGFALA 65
           K +E+ KMEE K+  VYMWGYLPG SPEKSPIL+PI        DSWKDVCGGGCGFA+A
Sbjct: 9   KEQEDGKMEEGKKATVYMWGYLPGVSPEKSPILNPISVNYPDADDSWKDVCGGGCGFAMA 68

Query: 66  TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
            SE GKL+TWGSADDE QSY+T GKHGETPE F LP+EAS++KAAA         + GE+
Sbjct: 69  ISEGGKLVTWGSADDENQSYVTCGKHGETPEAFLLPSEASILKAAA---------DTGEL 119

Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ---APPSDKRAGEEVVKRRKT 182
           YTWGW+ECVP  K  RD  S G+ QKD+  KQ+ L TEQ   A   DKR GEE+VKRR+ 
Sbjct: 120 YTWGWKECVPLGKFPRDGASWGALQKDNAAKQNVLSTEQVSSASSDDKRNGEEIVKRRRV 179

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
           S  +EE+EN   GDE+FT++P +V+L PGV+IT VAAGGRHTL LSD GQVWGWGYGGEG
Sbjct: 180 S-LKEENENSEYGDEYFTVTPAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEG 238

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGR 299
           QLGLGSR+KMV +PHLIP  E   +GK R  +V  GS N   +      SYVKEIACGGR
Sbjct: 239 QLGLGSRVKMVSSPHLIPFTEQPTTGKHRSSVVHNGSTNLPAQVSNFPGSYVKEIACGGR 298

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HSAVVTDAG LLTFGWGLYGQCGHGSTNDQLRP+   SL  IQ+E+IAAGLWHT+CI+++
Sbjct: 299 HSAVVTDAGTLLTFGWGLYGQCGHGSTNDQLRPTSLPSLSGIQIERIAAGLWHTMCITID 358

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           GRVYVFGGNQFGQLGTG  Q E +P+LLE P LESK  K+VSCGARHSA+L EDGQV SW
Sbjct: 359 GRVYVFGGNQFGQLGTGASQGETLPRLLEDPCLESKLVKMVSCGARHSAILLEDGQVFSW 418

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           GWNKYGQLG+GDSIDRN P+ VPI G  P+ +ACGWWHTLLLAET
Sbjct: 419 GWNKYGQLGVGDSIDRNTPTQVPIEGCRPKMVACGWWHTLLLAET 463


>gi|359482088|ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like isoform
           1 [Vitis vinifera]
          Length = 514

 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 323/488 (66%), Positives = 376/488 (77%), Gaps = 28/488 (5%)

Query: 2   EMNGSKRE-ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVC 56
           + +GS+ E E  KMEE   +VVYMWGYLPG S + SP+LSP+P  L       DSWKDVC
Sbjct: 17  DCDGSEGEGEAMKMEE---SVVYMWGYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVC 73

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
           GGGCGFA+A SESGKLITWGS DD GQSYLTSG+HGETPEPFPLPTEA +VKAAAGWAHC
Sbjct: 74  GGGCGFAVAISESGKLITWGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHC 133

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP--------- 167
           VS+T+ GE YTWGW+ECVPS KV  D  +   F+KDS GKQS L TEQ  P         
Sbjct: 134 VSLTDKGEAYTWGWKECVPSGKVLLD-STGVRFEKDSFGKQSLLQTEQEGPKPQSSNSTG 192

Query: 168 ------SDKRAGEEVVKRRKTSSAREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAG 220
                  +++A E  +K+R+TSSA++E E+ + S DE F  SPCLVTL PGV+I+ +AAG
Sbjct: 193 GMLSRVDNRKAREGSIKKRRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAG 252

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
           GRHTL LSDMGQVWGWGYGGEGQLGLGSR K+V +PHLIPC   +A GKDRP LV QGS+
Sbjct: 253 GRHTLALSDMGQVWGWGYGGEGQLGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSL 312

Query: 281 NSS---GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
           +S+    K   S VK IACGGRHSAV+TDAG LLTFGWGL+GQCG G+T+DQLRP+  S+
Sbjct: 313 SSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSA 372

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           L  ++V  IAAGLWHT+C S EG+VY FGGNQFGQLGTG DQAE +PKLL+   LE+KRA
Sbjct: 373 LSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGADQAETLPKLLDASNLENKRA 432

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWH 457
           K+VSCGARHS VLTE G++ SWGWNKYGQLGLGD IDRNIPS V I G   +N+ACGWWH
Sbjct: 433 KIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSPVSIGGCQLKNVACGWWH 492

Query: 458 TLLLAETT 465
           TLLLA T+
Sbjct: 493 TLLLATTS 500



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 27/178 (15%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +  IA GGRH+  ++D G +  +G+G  GQ G GS                         
Sbjct: 246 ISTIAAGGRHTLALSDMGQVWGWGYGGEGQLGLGS------------------------- 280

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
             T  +S    +  F  + +G+    +    ++    +   +   R K ++CG RHSAV+
Sbjct: 281 -RTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRHSAVI 339

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           T+ GQ+L++GW  +GQ GLG++ D+  P+ V  + G     IA G WHTL  +   Q+
Sbjct: 340 TDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSALSGVKVAGIAAGLWHTLCFSAEGQV 397


>gi|225449388|ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
           vinifera]
          Length = 484

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 309/483 (63%), Positives = 373/483 (77%), Gaps = 22/483 (4%)

Query: 3   MNGSKREENEK--MEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGG-DSWKDVCGGG 59
           MNG  +  +E   ME  +E +V+M GYLPG  P++SP+LSPI  R      +W+DVCGGG
Sbjct: 1   MNGEGKGPDEAVVMEGVREKLVFMMGYLPGALPQRSPLLSPIAVRSPASIHAWRDVCGGG 60

Query: 60  CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
           CGFA+A SESGKLITWGS DD GQSY+TSGKHGETPEPFPLPTEAS+VKAAAGWAHC SV
Sbjct: 61  CGFAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASV 120

Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP------------ 167
           TE GEVYTWGW+ECVPS KV  D    GS +KD   +QS+  TEQ  P            
Sbjct: 121 TENGEVYTWGWKECVPSGKVFGDPSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGV 180

Query: 168 ---SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
                K  GEE  KRR+  S+++ +E+ +SGDE  +  PCLVTLNPGV+I  VAAGGRHT
Sbjct: 181 SGTDSKGGGEESTKRRRMLSSKQAAES-SSGDETLSALPCLVTLNPGVRIANVAAGGRHT 239

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
           L LSD+GQVWGWGYGGEGQLGLGSRI+MV +PH +PC+E ++ GK+R   + +G+V++ G
Sbjct: 240 LALSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVESSSYGKERSSALARGNVSTEG 299

Query: 285 KAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
           ++ R   SYVK IACGGRHSAV+TDAGALL FGWGLYGQCG GST+D+L P+  SSL+ I
Sbjct: 300 QSLRVPGSYVKWIACGGRHSAVITDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGI 359

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           Q+E++AAGLWHTVCIS +G VY FGGNQFGQLGTGVDQ E +P+LL+ P LE+  AK+VS
Sbjct: 360 QIERVAAGLWHTVCISADGDVYTFGGNQFGQLGTGVDQPETLPRLLDAPSLENAHAKIVS 419

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
           CGARHSA++T DG++ SWGWNKYGQLGLGD +DRNIPS V + G  P+N+ACGWWHTLLL
Sbjct: 420 CGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQVTLDGCTPKNVACGWWHTLLL 479

Query: 462 AET 464
           AE+
Sbjct: 480 AES 482


>gi|255566472|ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
 gi|223536498|gb|EEF38145.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
          Length = 476

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 308/476 (64%), Positives = 364/476 (76%), Gaps = 16/476 (3%)

Query: 3   MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
           MNG  +E  +  E  KE +V+MWGYLPG  P++SPILSP+  R   G SWKDVCGGGCGF
Sbjct: 1   MNGEGKEVMKMEEMVKEKLVFMWGYLPGALPQRSPILSPVVVR-ADGYSWKDVCGGGCGF 59

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           A+A SESGKLITWGS DD GQSY+TSGKHGE PEPFPLPTEAS++KAAAGWAHC++ T+ 
Sbjct: 60  AMAISESGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIMKAAAGWAHCIAATDT 119

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA---------- 172
           GEVYTWGW+EC+PS KV  D   AG  +KD   + S   TEQ  P  + +          
Sbjct: 120 GEVYTWGWKECIPSGKVFGDPSVAGGTEKDVFERHSPFLTEQVSPRSQSSRSTGGIDGRG 179

Query: 173 -GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
            G+E  KRR+ SSA++ +E+ +SGDE  +  PCLVTLNPGV+IT VAAGGRHTL LSD+G
Sbjct: 180 SGDESTKRRRISSAKQSAESSSSGDETLSALPCLVTLNPGVRITTVAAGGRHTLALSDIG 239

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR--- 288
           QVWGWGYGGEGQLGLGSRI+MV +PH +PC++  + GKDRP    +G + S G   R   
Sbjct: 240 QVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVD-PSYGKDRPAPFSRGGMTSEGHGFRVPG 298

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           SYVK IACGGRHSAV+TDAGALLTFGWGLYGQCG GST+D+L P   S L+ I++  +AA
Sbjct: 299 SYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPICVSPLLGIRIAGVAA 358

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           GLWHT+C+S +G VY FGGNQFGQLGTG DQAE  P+LL+ P LE   AKVVSCGARHSA
Sbjct: 359 GLWHTICVSADGDVYAFGGNQFGQLGTGSDQAETTPRLLDAPSLEDIHAKVVSCGARHSA 418

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           ++ EDG+V  WGWNKYGQLGLGD IDRNIPS V I G +PRN+ACGWWHTLLLAE+
Sbjct: 419 IVAEDGKVFCWGWNKYGQLGLGDVIDRNIPSPVTIEGCIPRNVACGWWHTLLLAES 474


>gi|356566559|ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 525

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 308/468 (65%), Positives = 356/468 (76%), Gaps = 25/468 (5%)

Query: 19  ETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGKLIT 74
           E +VYMWGYLPG SPEKSPILSP P  L       DSWKDVCGGGCGFA+  SE GKLIT
Sbjct: 61  EKMVYMWGYLPGASPEKSPILSPAPVTLSDPSLAVDSWKDVCGGGCGFAMVISEKGKLIT 120

Query: 75  WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
           WGSADDEGQSYL SGKHGE P  + LPTEASVVKAAAGWAHC SVTE GEVY WGW+ECV
Sbjct: 121 WGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVTEEGEVYAWGWKECV 180

Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------------SDKRAGEEVVKRRK 181
           PS KV  DF + GS QKD  GKQS+   EQ  P              +K+ G+EVVKRRK
Sbjct: 181 PSGKVITDFITVGSLQKDIAGKQSSSIAEQGSPQSSNTSSGSDSHHDNKKVGDEVVKRRK 240

Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
            + +R++S++ ASGDEFFT+SP LVTL  GVKIT V+ GGRHTL LSD+GQVWGWGYGGE
Sbjct: 241 ITFSRQDSDSQASGDEFFTVSPSLVTLGNGVKITSVSLGGRHTLALSDVGQVWGWGYGGE 300

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR----SYVKEIACG 297
           GQLGLGSR+KMV +PHLIPC+E A  GKD+     QGS   +G  G     SYV +I+CG
Sbjct: 301 GQLGLGSRVKMVSSPHLIPCIESA--GKDKSSAFHQGS--GAGAQGSNVTGSYVMDISCG 356

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           GRHS V+TDAGALLTFGWGLYGQCG G+  DQLRP+   SL+  +VE+IAAGLWHT+C++
Sbjct: 357 GRHSVVITDAGALLTFGWGLYGQCGQGNNVDQLRPTLVPSLLGTRVEKIAAGLWHTLCVT 416

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           V G++Y FGGNQFGQLGTG DQ E  P+ L+    E+K + +VSCGARHSA+LT+DG + 
Sbjct: 417 VNGQIYAFGGNQFGQLGTGTDQPETSPRQLDASRFENKHSSIVSCGARHSALLTDDGHLF 476

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETT 465
           +WGWNKYGQLGLGDS+DRNIP  V I G  PRN+ACGWWHTLLL + T
Sbjct: 477 TWGWNKYGQLGLGDSVDRNIPGQVSIAGCRPRNVACGWWHTLLLGDKT 524



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 121/302 (40%), Gaps = 58/302 (19%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L  L     + K AAG  H   +++ G+V+ WG+      G     K++     +  L
Sbjct: 141 PGLYQLPTEASVVKAAAGWAHCASVTEEGEVYAWGWKECVPSG-----KVITDFITVGSL 195

Query: 263 EHAASGKDRPLLVRQGSV------------NSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
           +   +GK    +  QGS             + + K G   VK                  
Sbjct: 196 QKDIAGKQSSSIAEQGSPQSSNTSSGSDSHHDNKKVGDEVVKRRK--------------- 240

Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
           +TF          G     + PS  +    +++  ++ G  HT+ +S  G+V+ +G    
Sbjct: 241 ITFSRQDSDSQASGDEFFTVSPSLVTLGNGVKITSVSLGGRHTLALSDVGQVWGWGYGGE 300

Query: 371 GQLGTGVDQAENVPKLLETPILES------------------------KRAKVVSCGARH 406
           GQLG G  + + V      P +ES                             +SCG RH
Sbjct: 301 GQLGLG-SRVKMVSSPHLIPCIESAGKDKSSAFHQGSGAGAQGSNVTGSYVMDISCGGRH 359

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
           S V+T+ G +L++GW  YGQ G G+++D+  P+LVP + G     IA G WHTL +    
Sbjct: 360 SVVITDAGALLTFGWGLYGQCGQGNNVDQLRPTLVPSLLGTRVEKIAAGLWHTLCVTVNG 419

Query: 466 QI 467
           QI
Sbjct: 420 QI 421


>gi|356523185|ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Glycine max]
          Length = 528

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 309/473 (65%), Positives = 357/473 (75%), Gaps = 28/473 (5%)

Query: 17  CKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGKL 72
           C E +VYMWGYLPG SPEKSPILSP P  L      GDSWKDVCGGGCGFA+A SE GKL
Sbjct: 59  CAEKMVYMWGYLPGASPEKSPILSPAPVNLSDRSLAGDSWKDVCGGGCGFAMAISEKGKL 118

Query: 73  ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
           ITWGSADDEGQSYL SGKHGE P  + LPTEASVVKAAAGWAHC SV E GEVY WGW+E
Sbjct: 119 ITWGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVNEEGEVYAWGWKE 178

Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSA---LPTEQAPP-------------SDKRAGEEV 176
           CVPS KV  DF + GSFQKD  GKQ +          P              +K+ G+EV
Sbjct: 179 CVPSGKVITDFITVGSFQKDVAGKQRSXWNFRHXTGSPQSSNTSSGSDSHHDNKKVGDEV 238

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           +KRRK + +R++S++ ASGDEFFT+SP LVTL  GVKIT VA GGRHTL LSD+GQVWGW
Sbjct: 239 LKRRKITFSRQDSDSQASGDEFFTVSPSLVTLASGVKITSVAVGGRHTLALSDVGQVWGW 298

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR----SYVK 292
           GYGGEGQLGLGSR+KMV +PHLIPC+E  +SGKD+     QGS   +G  G     SYV 
Sbjct: 299 GYGGEGQLGLGSRVKMVSSPHLIPCIE--SSGKDKSSAFHQGS--GAGAQGSNVTGSYVM 354

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           +IACGGRHS V+TDAGALLTFGWGLYGQCG G+  DQLRP+   SL+  +VE+IAAGLWH
Sbjct: 355 DIACGGRHSVVITDAGALLTFGWGLYGQCGQGNNADQLRPTLVPSLLGTRVEKIAAGLWH 414

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           T+C+SV G++Y FGGNQFGQLGTG DQ E  P+ L+    E+K + +VSCGARHSA+LT+
Sbjct: 415 TLCVSVNGQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFENKHSSIVSCGARHSALLTD 474

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETT 465
           DG + +WGWNKYGQLGLGDS+DRNIP  V I G  PRN+ACGWWHTLL+ + T
Sbjct: 475 DGHLFTWGWNKYGQLGLGDSVDRNIPGQVSIAGCRPRNVACGWWHTLLMGDKT 527



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 28/164 (17%)

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE 388
           + PS  +    +++  +A G  HT+ +S  G+V+ +G    GQLG G   +  + P L+ 
Sbjct: 263 VSPSLVTLASGVKITSVAVGGRHTLALSDVGQVWGWGYGGEGQLGLGSRVKMVSSPHLI- 321

Query: 389 TPILESK------------------------RAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            P +ES                             ++CG RHS V+T+ G +L++GW  Y
Sbjct: 322 -PCIESSGKDKSSAFHQGSGAGAQGSNVTGSYVMDIACGGRHSVVITDAGALLTFGWGLY 380

Query: 425 GQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           GQ G G++ D+  P+LVP + G     IA G WHTL ++   QI
Sbjct: 381 GQCGQGNNADQLRPTLVPSLLGTRVEKIAAGLWHTLCVSVNGQI 424


>gi|356539897|ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 303/477 (63%), Positives = 369/477 (77%), Gaps = 16/477 (3%)

Query: 3   MNGSKREENE-KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC-GGDSWKDVCGGGC 60
           MNG   E  + +ME  KE +VYMWGYLPG  P+++P+L+P+  R+   G SWKDVCGGGC
Sbjct: 1   MNGEGSEAMQVEMEIEKERLVYMWGYLPGALPQRTPLLTPVLVRVPPSGYSWKDVCGGGC 60

Query: 61  GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
           GFA+A SE GKLITWGS DD GQSY+TSGKHGE PEPFPLPTE ++VKAAAGWAHCVSVT
Sbjct: 61  GFAMAISEPGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSVT 120

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------- 170
           + GEVYTWGWRECVPS KV  +  +  S +KD  G+QS+  TEQ  P  +          
Sbjct: 121 DCGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPGRQSSFLTEQVSPRSQGSKSTGGTAS 180

Query: 171 -RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
             +GEE  KRR+ SSA++ +E  +S D+  T  PCLVTLNPGV+I  VAAGGRHTL LSD
Sbjct: 181 GTSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSD 240

Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR- 288
           +GQVWGWGYGGEGQLGLGSRI+MV +PHL+PC+  ++ GKD    + +GS++S G+  R 
Sbjct: 241 IGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDISASLARGSMSSDGQNFRV 300

Query: 289 --SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
             SY+K IACGGRHSAV+TDAGA+LTFGWGLYGQCG GST+D+L P+  SSL+ I++E +
Sbjct: 301 PGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIRIEGV 360

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           AAGLWHTVC S +G VY FGGNQFGQLGTG DQAE +P+LL+ P LE+   K +SCGARH
Sbjct: 361 AAGLWHTVCTSADGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGARH 420

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           +A++T++G+V  WGWNKYGQLGLGD IDRNIPS V I G + +N+ACGWWHTLLLAE
Sbjct: 421 TALITDNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAE 477


>gi|297740323|emb|CBI30505.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score =  617 bits (1590), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 312/465 (67%), Positives = 361/465 (77%), Gaps = 24/465 (5%)

Query: 24  MWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGKLITWGSAD 79
           MWGYLPG S + SP+LSP+P  L       DSWKDVCGGGCGFA+A SESGKLITWGS D
Sbjct: 1   MWGYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVCGGGCGFAVAISESGKLITWGSED 60

Query: 80  DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
           D GQSYLTSG+HGETPEPFPLPTEA +VKAAAGWAHCVS+T+ GE YTWGW+ECVPS KV
Sbjct: 61  DLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGKV 120

Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEVVKRRKTSS 184
             D  +   F+KDS GKQS L TEQ  P                +++A E  +K+R+TSS
Sbjct: 121 LLD-STGVRFEKDSFGKQSLLQTEQEGPKPQSSNSTGGMLSRVDNRKAREGSIKKRRTSS 179

Query: 185 AREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
           A++E E+ + S DE F  SPCLVTL PGV+I+ +AAGGRHTL LSDMGQVWGWGYGGEGQ
Sbjct: 180 AKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAGGRHTLALSDMGQVWGWGYGGEGQ 239

Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS---GKAGRSYVKEIACGGRH 300
           LGLGSR K+V +PHLIPC   +A GKDRP LV QGS++S+    K   S VK IACGGRH
Sbjct: 240 LGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRH 299

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           SAV+TDAG LLTFGWGL+GQCG G+T+DQLRP+  S+L  ++V  IAAGLWHT+C S EG
Sbjct: 300 SAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSALSGVKVAGIAAGLWHTLCFSAEG 359

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           +VY FGGNQFGQLGTG DQAE +PKLL+   LE+KRAK+VSCGARHS VLTE G++ SWG
Sbjct: 360 QVYAFGGNQFGQLGTGADQAETLPKLLDASNLENKRAKIVSCGARHSVVLTEGGEIFSWG 419

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETT 465
           WNKYGQLGLGD IDRNIPS V I G   +N+ACGWWHTLLLA T+
Sbjct: 420 WNKYGQLGLGDCIDRNIPSPVSIGGCQLKNVACGWWHTLLLATTS 464



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 27/154 (17%)

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ-----------------AENV 383
           +++  IAAG  HT+ +S  G+V+ +G    GQLG G                     ++ 
Sbjct: 208 VRISTIAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRTKLVSSPHLIPCFNPSAYGKDR 267

Query: 384 PKLLETPILES---------KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
           P L+    L S          R K ++CG RHSAV+T+ GQ+L++GW  +GQ GLG++ D
Sbjct: 268 PSLVHQGSLSSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHD 327

Query: 435 RNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           +  P+ V  + G     IA G WHTL  +   Q+
Sbjct: 328 QLRPACVSALSGVKVAGIAAGLWHTLCFSAEGQV 361


>gi|296086178|emb|CBI31619.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 301/460 (65%), Positives = 360/460 (78%), Gaps = 20/460 (4%)

Query: 24  MWGYLPGTSPEKSPILSPIPARLCGG-DSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
           M GYLPG  P++SP+LSPI  R      +W+DVCGGGCGFA+A SESGKLITWGS DD G
Sbjct: 1   MMGYLPGALPQRSPLLSPIAVRSPASIHAWRDVCGGGCGFAMAISESGKLITWGSTDDLG 60

Query: 83  QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
           QSY+TSGKHGETPEPFPLPTEAS+VKAAAGWAHC SVTE GEVYTWGW+ECVPS KV  D
Sbjct: 61  QSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGWKECVPSGKVFGD 120

Query: 143 FGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEVVKRRKTSSARE 187
               GS +KD   +QS+  TEQ  P                 K  GEE  KRR+  S+++
Sbjct: 121 PSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGVSGTDSKGGGEESTKRRRMLSSKQ 180

Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
            +E+ +SGDE  +  PCLVTLNPGV+I  VAAGGRHTL LSD+GQVWGWGYGGEGQLGLG
Sbjct: 181 AAES-SSGDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLG 239

Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGRHSAVV 304
           SRI+MV +PH +PC+E ++ GK+R   + +G+V++ G++ R   SYVK IACGGRHSAV+
Sbjct: 240 SRIRMVSSPHPVPCVESSSYGKERSSALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVI 299

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
           TDAGALL FGWGLYGQCG GST+D+L P+  SSL+ IQ+E++AAGLWHTVCIS +G VY 
Sbjct: 300 TDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCISADGDVYT 359

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           FGGNQFGQLGTGVDQ E +P+LL+ P LE+  AK+VSCGARHSA++T DG++ SWGWNKY
Sbjct: 360 FGGNQFGQLGTGVDQPETLPRLLDAPSLENAHAKIVSCGARHSAIITADGKMFSWGWNKY 419

Query: 425 GQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           GQLGLGD +DRNIPS V + G  P+N+ACGWWHTLLLAE+
Sbjct: 420 GQLGLGDVVDRNIPSQVTLDGCTPKNVACGWWHTLLLAES 459


>gi|356569137|ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Glycine max]
          Length = 472

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 303/477 (63%), Positives = 368/477 (77%), Gaps = 22/477 (4%)

Query: 3   MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC-GGDSWKDVCGGGCG 61
           MNG   E +E M+  KE++VYMWGYLPG  P+++P+L+P+  R+   G  WKDVCGGGCG
Sbjct: 1   MNG---EGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCG 57

Query: 62  FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
           FA+A SE GKLITWGS DD GQSY+TSGKHGETPEPFPLPTE ++VKAAAGWAHCVSVT+
Sbjct: 58  FAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTD 117

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK----------- 170
            GEVYTWGWRECVPS KV  +  +  S +KD   +QS+  TEQ  P  +           
Sbjct: 118 CGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSFLTEQVSPRSQGSKSTGGTASG 177

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
            +GEE  KRR+ SSA++ +E  +S D+  T  PCLVTLNPGV+I  VAAGGRHTL LSD+
Sbjct: 178 TSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDI 237

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR-- 288
           GQVWGWGYGGEGQLGLGSRI+MV +PHL+PC+  ++ GKD   +    S++S G+  R  
Sbjct: 238 GQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDMARV----SISSDGQNFRVP 293

Query: 289 -SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
            SY+K IACGGRHSAV+TDAGA+LTFGWGLYGQCG GST+D+L PS  SSL+ IQ+E +A
Sbjct: 294 GSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPSCVSSLLGIQIEGVA 353

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
           AGLWHTVC SV+G VY FGGNQFGQLGTG DQAE +P+LL+ P LE+   K +SCGARH+
Sbjct: 354 AGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGARHT 413

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           A++ ++G+V  WGWNKYGQLGLGD IDRNIPS V I G + +N+ACGWWHTLLLAE+
Sbjct: 414 ALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAES 470



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 29/204 (14%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-------------------NDQLR 331
           +  +A GGRH+  ++D G +  +G+G  GQ G GS                     D  R
Sbjct: 221 IASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDMAR 280

Query: 332 PSYASSLMDIQV-----EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
            S +S   + +V     + IA G  H+  I+  G V  FG   +GQ G G    E  P  
Sbjct: 281 VSISSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPSC 340

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV---PI 443
           + +  L   + + V+ G  H+   + DG V ++G N++GQLG G      IP L+    +
Sbjct: 341 VSS--LLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSL 398

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
                + I+CG  HT L+A+  ++
Sbjct: 399 ENVNVKRISCGARHTALIADNGKV 422


>gi|334185962|ref|NP_190951.2| Regulator of chromosome condensation (RCC1) family protein
           [Arabidopsis thaliana]
 gi|332645627|gb|AEE79148.1| Regulator of chromosome condensation (RCC1) family protein
           [Arabidopsis thaliana]
          Length = 472

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 296/459 (64%), Positives = 352/459 (76%), Gaps = 11/459 (2%)

Query: 16  ECKETVVYMWGYLPGTSPEKSPILSPIPARLC----GGDSWKDVCGGGCGFALATSESGK 71
           ECK TVVYM GYLPG + EKSPILSP+P RL     GGDSWKDVCGGGCGFA+A SE GK
Sbjct: 13  ECKATVVYMSGYLPGAASEKSPILSPVPVRLSAAVHGGDSWKDVCGGGCGFAMAISEKGK 72

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           LITWGS DDEGQSY+ SGKHGETPEPFPLPTEA VV+A++GWAHC  VTE GE +TWGW+
Sbjct: 73  LITWGSTDDEGQSYVASGKHGETPEPFPLPTEAPVVQASSGWAHCAVVTETGEAFTWGWK 132

Query: 132 ECVPSAKVTRDFGSAGSFQKD--STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
           EC+PS        S  S Q D  S G  +A  T      +++ GEE VKRR+ S+A++E+
Sbjct: 133 ECIPSKDPVGKQQSGSSEQGDIASQGSNAASGT-TLQNENQKVGEESVKRRRVSTAKDET 191

Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
           E   SG +FF  +P LV++  GV+IT VA GGRHTL LSD+GQ+WGWGYGGEGQLGLGSR
Sbjct: 192 EGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSR 251

Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQG-SVNSSGKAGR---SYVKEIACGGRHSAVVT 305
           IKMV +PHLIPCLE   SGK+R  ++ QG +  +S +A R    Y+K I+CGGRHSA +T
Sbjct: 252 IKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAIT 311

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
           DAG L+TFGWGLYGQCGHG+TNDQLRP   S +  +++E +AAGLWHT+CIS +G+VY F
Sbjct: 312 DAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAF 371

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           GGNQFGQLGTG D AE +P+LL+   LE K AK VSCGARHSAVL EDGQ+L WGWNKYG
Sbjct: 372 GGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYG 431

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           QLGLGD+ DRNIP+ V + G   R +ACGWWHTLLL ++
Sbjct: 432 QLGLGDTNDRNIPTQVQLDGCRLRKVACGWWHTLLLGDS 470


>gi|356551654|ref|XP_003544189.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 477

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 293/465 (63%), Positives = 362/465 (77%), Gaps = 15/465 (3%)

Query: 15  EECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGD-SWKDVCGGGCGFALATSESGKLI 73
           E   +TV+YMWGYLPG  P+++P+L+P+  R+   D SW DVCGGGCGFA+A SESGKLI
Sbjct: 11  EGALQTVLYMWGYLPGALPQRTPLLTPVAVRVPPCDYSWNDVCGGGCGFAIAISESGKLI 70

Query: 74  TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
           TWGS DD GQSY+TSGKHGETPEPFPLPTEAS+VKAAAGWAHCV+VTE G VYTWGW+EC
Sbjct: 71  TWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVAVTEHGAVYTWGWKEC 130

Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-----------SDKRAGEEVVKRRKT 182
           +PS +V  +  +  S +KD  G+ S + TEQ  P           +   +GEE  KRR+ 
Sbjct: 131 IPSGRVFGEPSTGVSLEKDVPGRHSQVSTEQVSPRSQGSRSTGGTASSNSGEESTKRRRV 190

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
           SSA++ +E+ +S D+  T  PCLVTLNPG++I  VAAGGRHTL LSD G VW WGYGGEG
Sbjct: 191 SSAKQTAESSSSSDDSLTAFPCLVTLNPGIRIASVAAGGRHTLALSDTGLVWAWGYGGEG 250

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGR 299
           QLGLGSRI+MV TPHL+PC++ +   KDR   + +G+++S G+  R   SY+K IACGGR
Sbjct: 251 QLGLGSRIRMVSTPHLVPCIDSSYYSKDRSATLARGNMDSEGQTFRVPGSYIKRIACGGR 310

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HSAV+TDAGALLTFGWGLYGQCG G T+D+L P+  SS++ I +E++AAGLWHTVC S +
Sbjct: 311 HSAVITDAGALLTFGWGLYGQCGQGITDDELSPTCVSSILGIHIERVAAGLWHTVCTSAD 370

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G VY FG NQFGQLGTG DQAE +P+LL++P L++ RAK +SCGARH+A++TE G+V  W
Sbjct: 371 GDVYAFGENQFGQLGTGADQAETLPRLLDSPSLDNLRAKNISCGARHTALVTEGGKVFCW 430

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           GWNKYGQLGLGD IDRNIPS V I G +P+N+ACGWWHTLLLAE+
Sbjct: 431 GWNKYGQLGLGDVIDRNIPSEVIIEGCVPKNVACGWWHTLLLAES 475


>gi|356569139|ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Glycine max]
          Length = 459

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 300/466 (64%), Positives = 365/466 (78%), Gaps = 13/466 (2%)

Query: 3   MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC-GGDSWKDVCGGGCG 61
           MNG   E +E M+  KE++VYMWGYLPG  P+++P+L+P+  R+   G  WKDVCGGGCG
Sbjct: 1   MNG---EGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCG 57

Query: 62  FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
           FA+A SE GKLITWGS DD GQSY+TSGKHGETPEPFPLPTE ++VKAAAGWAHCVSVT+
Sbjct: 58  FAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTD 117

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
            GEVYTWGWRECVPS KV  +  +  S +KD   +QS+  T     +   +GEE  KRR+
Sbjct: 118 CGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSKST--GGTASGTSGEESSKRRR 175

Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
            SSA++ +E  +S D+  T  PCLVTLNPGV+I  VAAGGRHTL LSD+GQVWGWGYGGE
Sbjct: 176 VSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGGE 235

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGG 298
           GQLGLGSRI+MV +PHL+PC+  ++ GKD   +    S++S G+  R   SY+K IACGG
Sbjct: 236 GQLGLGSRIRMVSSPHLVPCINSSSYGKDMARV----SISSDGQNFRVPGSYIKGIACGG 291

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
           RHSAV+TDAGA+LTFGWGLYGQCG GST+D+L PS  SSL+ IQ+E +AAGLWHTVC SV
Sbjct: 292 RHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPSCVSSLLGIQIEGVAAGLWHTVCTSV 351

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           +G VY FGGNQFGQLGTG DQAE +P+LL+ P LE+   K +SCGARH+A++ ++G+V  
Sbjct: 352 DGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGARHTALIADNGKVFC 411

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           WGWNKYGQLGLGD IDRNIPS V I G + +N+ACGWWHTLLLAE+
Sbjct: 412 WGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAES 457



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 129/313 (41%), Gaps = 60/313 (19%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYG---------GEGQLGLGSRIKMVPTPHLIPCL 262
           V I K AAG  H + ++D G+V+ WG+          GE   G+ S  K VP        
Sbjct: 100 VTIVKAAAGWAHCVSVTDCGEVYTWGWRECVPSGKVFGESLTGV-SPEKDVPRRQSSKST 158

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRS---------------------YVKEIACGGRHS 301
              ASG       ++  V+S+ +   +                      +  +A GGRH+
Sbjct: 159 GGTASGTSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHT 218

Query: 302 AVVTDAGALLTFGWGLYGQCGHGST-------------------NDQLRPSYASSLMDIQ 342
             ++D G +  +G+G  GQ G GS                     D  R S +S   + +
Sbjct: 219 LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDMARVSISSDGQNFR 278

Query: 343 V-----EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           V     + IA G  H+  I+  G V  FG   +GQ G G    E  P  + +  L   + 
Sbjct: 279 VPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPSCVSS--LLGIQI 336

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV---PIHGFLPRNIACG 454
           + V+ G  H+   + DG V ++G N++GQLG G      IP L+    +     + I+CG
Sbjct: 337 EGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCG 396

Query: 455 WWHTLLLAETTQI 467
             HT L+A+  ++
Sbjct: 397 ARHTALIADNGKV 409


>gi|356501083|ref|XP_003519358.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 477

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 296/479 (61%), Positives = 363/479 (75%), Gaps = 19/479 (3%)

Query: 1   MEMNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGD-SWKDVCGGG 59
           M MN     +   ++     V+YMWGYLPG  P+++P+L+P+  R+   D SW DVCGGG
Sbjct: 1   MAMNNGDGTDGGALQR----VLYMWGYLPGALPQRTPLLTPVAVRVPPCDYSWNDVCGGG 56

Query: 60  CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
           CGFA+A SESGKLITWGS DD GQSY+TSGKHGETPEPFPLPTE S+VKAAAGWAHCV+V
Sbjct: 57  CGFAIAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTETSIVKAAAGWAHCVAV 116

Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-----------S 168
           TE GEVYTWGW+EC+PS KV  +  +  S +KD  G+ + L TEQ  P           +
Sbjct: 117 TEHGEVYTWGWKECIPSGKVFGESSTGVSLEKDVPGRHTPLFTEQVSPRSQGSRSTGGTA 176

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
              +GEE  KRR+ SSA++ +E+ +S D+  T  PCLVTLNPG++I  VAAGGRHTL LS
Sbjct: 177 SSNSGEESTKRRRVSSAKQTAESSSSSDDSLTAFPCLVTLNPGIRIASVAAGGRHTLALS 236

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
           D G VW WGYGGEGQLGLGSRI+MV TPHL+PC++ +   KDR   + +G++ S G+  R
Sbjct: 237 DTGLVWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYVKDRSATLARGNMGSEGQTFR 296

Query: 289 ---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
              SY+K IACGGRHSAV+TDAGALLTFGWGLYGQCG G T+D+L P+  SSL+ I +E 
Sbjct: 297 IPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGITDDELSPTCVSSLLGIHIEG 356

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           IAAGLWHTVC S +G VY FGGNQFGQLGTG DQAE +P+L+++P L++  AK +SCGAR
Sbjct: 357 IAAGLWHTVCTSADGDVYAFGGNQFGQLGTGADQAETLPRLVDSPSLKNLHAKNISCGAR 416

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           H+A++TE G+V  WGWNKYGQLGLGD IDRNIPS V I G +P+N+ACGWWHTLLLAE+
Sbjct: 417 HTALVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVPKNVACGWWHTLLLAES 475


>gi|357460949|ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489804|gb|AES71007.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 464

 Score =  603 bits (1554), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 291/464 (62%), Positives = 358/464 (77%), Gaps = 23/464 (4%)

Query: 16  ECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKL 72
           E KE +VYMWGYLPG  P+++P+L+P+  R+    GG +WKDV GGGCGFA+A SESGKL
Sbjct: 7   EVKEKMVYMWGYLPGALPQRTPLLTPVLVRVPATSGGYNWKDVSGGGCGFAMAISESGKL 66

Query: 73  ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
           ITWGS DD GQSY+TSGKHGETPEPF LP E S+VKAA+ WAHCV+ T+ GEVYTWGW+E
Sbjct: 67  ITWGSTDDLGQSYVTSGKHGETPEPFSLPNEVSIVKAASAWAHCVAATDCGEVYTWGWKE 126

Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------RAGEEVVKRRKTS 183
           C+PS KV  +     S +KD+ GK S+  TEQ     +          +GEE  KRRK S
Sbjct: 127 CIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQVSSRSQVSKSTGGTVSSGEESSKRRKVS 186

Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
           SA++ ++  +SGD+  T  PCLVTLNPGVKIT VAAGGRHTL+LSD+GQVWGWGYGGEGQ
Sbjct: 187 SAKQAAQTSSSGDDILTAMPCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQ 246

Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGRH 300
           LGLGSR++MV +PH+IPC++ ++        + QGS++S G   R   S +K IACGGRH
Sbjct: 247 LGLGSRVRMVSSPHIIPCIDSSS--------LVQGSMSSEGHNFRIPGSCIKAIACGGRH 298

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           SAV+TDAGA+L FGWGLYGQCG GST+D+L P+  SSL+ IQ+E +AAGLWHTVC S +G
Sbjct: 299 SAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLWHTVCTSADG 358

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            VY FGGNQFGQLGTG DQAE +P+LL+ P LE+   K +SCGARH+A++T++G+V SWG
Sbjct: 359 DVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLENVNVKTISCGARHTALVTDNGKVFSWG 418

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           WNKYGQLGLGD IDRNIPS V I G + +N+ACGWWHTLLLAE+
Sbjct: 419 WNKYGQLGLGDVIDRNIPSEVAIEGCIAKNVACGWWHTLLLAES 462


>gi|449465846|ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
 gi|449516435|ref|XP_004165252.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 491

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 302/489 (61%), Positives = 372/489 (76%), Gaps = 27/489 (5%)

Query: 3   MNGS-KREENEKM---EECKET-VVYMWGYLPGTSPEKSPILSPIPARLCGGDS-----W 52
           MNG   R E+E +   E+ K+  +V+MWGYLPG  P++SP+LSP+  RL G D+     W
Sbjct: 1   MNGEGSRGEDEIVGMEEDVKDNKIVFMWGYLPGALPQRSPLLSPVVVRLPGKDATDAHGW 60

Query: 53  KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
           +DVCGGGCGFA+A S +GKLITWG+ DD GQSY+TSGKHGETPEPFPLPTEAS+VKAAAG
Sbjct: 61  RDVCGGGCGFAVAISANGKLITWGATDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAG 120

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS---- 168
           WAH V++T+ GEVYTWGW+ECVPS K+  D  +  ++++D   +QS+   +Q  P     
Sbjct: 121 WAHTVAITDRGEVYTWGWKECVPSGKMFTDLSAGAAYERDVLERQSSSVIDQVSPRLQAS 180

Query: 169 ---------DKRAG-EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
                    + RAG  E  KRR+ SSA+  +E+ +S DE  +  PCLVTLNPGV+IT V+
Sbjct: 181 RSSGVVSSIEARAGGAESTKRRRVSSAKLAAESSSSSDETLSAVPCLVTLNPGVRITSVS 240

Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
           AGGRHTL LSDMGQVWGWGYGGEGQLGLGSRI+MV +PH IPC+E ++ GKDR   + +G
Sbjct: 241 AGGRHTLALSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSSFGKDRSAALARG 300

Query: 279 SVNSSGKAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
           S +  G+  R   SYVK IACGGRHSA VTDAGALLTFGWGLYGQCG G T+D+L P+  
Sbjct: 301 SASLEGQGSRIPGSYVKGIACGGRHSAAVTDAGALLTFGWGLYGQCGQGCTDDELSPTCV 360

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           SSL+ I++E +AAGLWHTVCIS +G +Y FGGNQFGQLGTG DQAE +P+LL+ P +E+ 
Sbjct: 361 SSLLGIRIESVAAGLWHTVCISSDGDIYSFGGNQFGQLGTGADQAETLPRLLDAPSVENV 420

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
            AKVVSCGARHSA+++EDG+V  WGWNKYGQLGLGD IDRNIP  VP+     +N+ACGW
Sbjct: 421 NAKVVSCGARHSAIVSEDGKVFCWGWNKYGQLGLGDVIDRNIPVEVPMENCNSKNVACGW 480

Query: 456 WHTLLLAET 464
           WHTLLLAE+
Sbjct: 481 WHTLLLAES 489


>gi|7630003|emb|CAB88345.1| putative protein [Arabidopsis thaliana]
          Length = 487

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 296/474 (62%), Positives = 352/474 (74%), Gaps = 26/474 (5%)

Query: 16  ECKETVVYMWGYLPGTSPEKSPILSPIPARLC----GGDSWKDVCGGGCGFALATSESGK 71
           ECK TVVYM GYLPG + EKSPILSP+P RL     GGDSWKDVCGGGCGFA+A SE GK
Sbjct: 13  ECKATVVYMSGYLPGAASEKSPILSPVPVRLSAAVHGGDSWKDVCGGGCGFAMAISEKGK 72

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           LITWGS DDEGQSY+ SGKHGETPEPFPLPTEA VV+A++GWAHC  VTE GE +TWGW+
Sbjct: 73  LITWGSTDDEGQSYVASGKHGETPEPFPLPTEAPVVQASSGWAHCAVVTETGEAFTWGWK 132

Query: 132 ECVPSAKVTRDFGSAGSFQKD--STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
           EC+PS        S  S Q D  S G  +A  T      +++ GEE VKRR+ S+A++E+
Sbjct: 133 ECIPSKDPVGKQQSGSSEQGDIASQGSNAASGT-TLQNENQKVGEESVKRRRVSTAKDET 191

Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS---------------DMGQVW 234
           E   SG +FF  +P LV++  GV+IT VA GGRHTL LS               D+GQ+W
Sbjct: 192 EGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSVEDSFEDDHVFTEVSDLGQIW 251

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-SVNSSGKAGR---SY 290
           GWGYGGEGQLGLGSRIKMV +PHLIPCLE   SGK+R  ++ QG +  +S +A R    Y
Sbjct: 252 GWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQY 311

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +K I+CGGRHSA +TDAG L+TFGWGLYGQCGHG+TNDQLRP   S +  +++E +AAGL
Sbjct: 312 IKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGL 371

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           WHT+CIS +G+VY FGGNQFGQLGTG D AE +P+LL+   LE K AK VSCGARHSAVL
Sbjct: 372 WHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCGARHSAVL 431

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
            EDGQ+L WGWNKYGQLGLGD+ DRNIP+ V + G   R +ACGWWHTLLL ++
Sbjct: 432 AEDGQLLCWGWNKYGQLGLGDTNDRNIPTQVQLDGCRLRKVACGWWHTLLLGDS 485


>gi|147790448|emb|CAN69973.1| hypothetical protein VITISV_001453 [Vitis vinifera]
          Length = 498

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 315/496 (63%), Positives = 362/496 (72%), Gaps = 56/496 (11%)

Query: 13  KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGG----DSWKDVCGGGCGFALATSE 68
           KMEE   +VVYMWGYLPG S + SP+LSP+P  L       DSWKDVCGGGCGFA+A SE
Sbjct: 2   KMEE---SVVYMWGYLPGASLQGSPLLSPVPVALPASTLSEDSWKDVCGGGCGFAVAISE 58

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
           SGKLITWGS DD GQSYLTSG+HGETPEPFPLPTEA +VKAAAGWAHCVS+T+ GE YTW
Sbjct: 59  SGKLITWGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTW 118

Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP---TEQAPP-------------SDKRA 172
           GW+ECVPS KV            DSTG   A P   TE   P              +++A
Sbjct: 119 GWKECVPSGKVLL----------DSTGTNVAKPELDTEGPKPQXSNSTGGMLSRVDNRKA 168

Query: 173 GEEVVKRRKTSSAREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
            E  +K+R+TSSA++E E+ + S DE F  SPCLVTL PGV+I+ VAAGGRHTL LSDMG
Sbjct: 169 REGSIKKRRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTVAAGGRHTLALSDMG 228

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS---GKAGR 288
           QVWGWGYGGEGQLGLGSR K+V +PHLIPC   +A GKDRP LV QGS++S+    K   
Sbjct: 229 QVWGWGYGGEGQLGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPG 288

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           S VK IACGGRHSAV+TDAG LLTFGWGL+GQCG G+T+DQLRP+  S+L  ++V  IAA
Sbjct: 289 SRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSALSGVKVXGIAA 348

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA-------------------ENVPKLLET 389
           GLWHT+C S EG+VY FGGNQFGQLGTG DQA                   E +PKLL+ 
Sbjct: 349 GLWHTLCFSAEGQVYAFGGNQFGQLGTGADQAEFDSRIXIPSLGEFRKRLTETLPKLLDA 408

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
             LE+KRAK+VSCGARHS VLTE G++ SWGWNKYGQLGLGD IDRNIPS V I G   +
Sbjct: 409 SNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSPVSIGGCQLK 468

Query: 450 NIACGWWHTLLLAETT 465
           N+ACGWWHTLLLA T+
Sbjct: 469 NVACGWWHTLLLATTS 484



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 120/293 (40%), Gaps = 65/293 (22%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGG---EGQLGLGSRIKMVPTPHL-----IPCLEHA 265
           I K AAG  H + L+D G+ + WG+      G++ L S    V  P L      P   ++
Sbjct: 96  IVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGKVLLDSTGTNVAKPELDTEGPKPQXSNS 155

Query: 266 ASG----------------KDRPLLVRQGSVNSSGKAGRSY--------------VKEIA 295
             G                K R    +Q   +SS     ++              +  +A
Sbjct: 156 TGGMLSRVDNRKAREGSIKKRRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTVA 215

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
            GGRH+  ++D G +  +G+G  GQ G GS                           T  
Sbjct: 216 AGGRHTLALSDMGQVWGWGYGGEGQLGLGS--------------------------RTKL 249

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           +S    +  F  + +G+    +    ++    +   +   R K ++CG RHSAV+T+ GQ
Sbjct: 250 VSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRHSAVITDAGQ 309

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           +L++GW  +GQ GLG++ D+  P+ V  + G     IA G WHTL  +   Q+
Sbjct: 310 LLTFGWGLHGQCGLGNTHDQLRPACVSALSGVKVXGIAAGLWHTLCFSAEGQV 362


>gi|326533000|dbj|BAJ89345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 500

 Score =  590 bits (1520), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 278/473 (58%), Positives = 356/473 (75%), Gaps = 24/473 (5%)

Query: 13  KMEECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSES 69
           + E  K  VV MWGYLPG SP++SP+L P+P RL     GD+W+DVCGGGCGFA+A SES
Sbjct: 29  REEAGKGQVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAGDAWRDVCGGGCGFAMAISES 88

Query: 70  GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           GKL+TWGS DD GQSY+T+GKH ETPE FPLP++ ++ +A AGWAHCV++T+ G VYTWG
Sbjct: 89  GKLLTWGSTDDMGQSYVTAGKHEETPEAFPLPSDVAIARADAGWAHCVAITDEGVVYTWG 148

Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGE 174
           W+ECVP+ +V  D  S G+ +KD   +QSA   +Q  P               S+ R  E
Sbjct: 149 WKECVPTGRVIADQASVGTLEKDE--RQSASANDQVSPRSQVSRTSSGAASGPSESRGTE 206

Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
           +  KRR+ SSA++ +++  SGDE  +  PC+VT N GVKIT VAAGGRHTL LSD GQVW
Sbjct: 207 DSTKRRRLSSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRHTLALSDFGQVW 266

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYV 291
           GWGYGGEGQLGLGSRI+ V +PH IPC+E A+  KDRP  ++ G+ N+ G+  +   S V
Sbjct: 267 GWGYGGEGQLGLGSRIRTVSSPHTIPCIESASYSKDRPSAMK-GNKNAEGQINKVMGSRV 325

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
             IACGGRHS VVTD+GALL FGWGLYGQCG G+T+D L P+  S+++ ++++ +AAGLW
Sbjct: 326 TAIACGGRHSVVVTDSGALLAFGWGLYGQCGQGNTDDVLSPTCVSAILGVKMQDVAAGLW 385

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           HTV IS +G VY FGGNQFGQLG G DQAE +PKL++ P LE+K A+ VSCGARHSA++T
Sbjct: 386 HTVSISADGDVYSFGGNQFGQLGIGSDQAETIPKLVDAPSLENKNARSVSCGARHSAIIT 445

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           ++G+V  WGWNKYGQLGLGDS+DRN+P +VP+ G+ P N++CGWWHTL+LAE+
Sbjct: 446 DEGEVFCWGWNKYGQLGLGDSMDRNVPCIVPVDGYHPLNVSCGWWHTLVLAES 498


>gi|297816690|ref|XP_002876228.1| hypothetical protein ARALYDRAFT_485777 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322066|gb|EFH52487.1| hypothetical protein ARALYDRAFT_485777 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 487

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 297/487 (60%), Positives = 352/487 (72%), Gaps = 54/487 (11%)

Query: 16  ECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGK 71
           ECK TVVYM GYLPG +PEKSPILSP+P RL     GGDSWKDVCGGGCGFA+A SE GK
Sbjct: 13  ECKATVVYMSGYLPGAAPEKSPILSPVPVRLPAAVHGGDSWKDVCGGGCGFAMAISEKGK 72

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           LITWGS DDEGQSY+ SGKHGETPE FPLPTEA VV+A++GWAHC  VTEAGE +TWGW+
Sbjct: 73  LITWGSTDDEGQSYVASGKHGETPELFPLPTEAPVVQASSGWAHCAVVTEAGEAFTWGWK 132

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD---------------KRAGEEV 176
           EC+PS              KD  GKQ +  +EQ   +                ++ GE+ 
Sbjct: 133 ECIPS--------------KDPVGKQQSGSSEQGEIASQGSNAASGMTLQNETRKVGEDS 178

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-------- 228
           VKRR+ S+A++E+E   SG +FF  +P LV++  GV+IT VA GGRHTL LS        
Sbjct: 179 VKRRRVSTAKDETEGHTSGGDFFATAPSLVSVGLGVRITSVATGGRHTLALSVEDSFEDD 238

Query: 229 -------DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG--- 278
                  D+GQ+WGWGYGGEGQLGLGSRIKMV +PHLIPCLE   SGK+R  ++ QG   
Sbjct: 239 HVFAEVSDIGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTT 298

Query: 279 --SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
             S   S + GR Y+K I+CGGRHSA +TDAG L+TFGWGLYGQCGHG+TNDQLRP   S
Sbjct: 299 TTSTQVSREPGR-YIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVS 357

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
           S+  +++E +AAGLWHT+CIS +G+VY FGGNQFGQLGTG D AE +P+LL    LE K 
Sbjct: 358 SMKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLGGQNLEGKY 417

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWW 456
           AK VSCGARHSAVL EDGQ+L WGWNKYGQLGLGD+ DR+IP+ V + G   R +ACGWW
Sbjct: 418 AKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRSIPTQVQLDGCRLRKVACGWW 477

Query: 457 HTLLLAE 463
           HTLLLA+
Sbjct: 478 HTLLLAD 484



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 49/224 (21%)

Query: 291 VKEIACGGRHS---------------AVVTDAGALLTFGWGLYGQCGHGS-----TNDQL 330
           +  +A GGRH+               A V+D G +  +G+G  GQ G GS     ++  L
Sbjct: 216 ITSVATGGRHTLALSVEDSFEDDHVFAEVSDIGQIWGWGYGGEGQLGLGSRIKMVSSPHL 275

Query: 331 RPSYAS-------SLMDIQ-----------------VEQIAAGLWHTVCISVEGRVYVFG 366
            P   S       S +  Q                 ++ I+ G  H+  I+  G +  FG
Sbjct: 276 IPCLESIGSGKERSFILHQGGTTTTSTQVSREPGRYIKAISCGGRHSAAITDAGGLITFG 335

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
              +GQ G G    +  P  + +  ++S R + V+ G  H+  ++ DG+V ++G N++GQ
Sbjct: 336 WGLYGQCGHGNTNDQLRPMAVSS--MKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQ 393

Query: 427 LGLGDSIDRNIPSLV---PIHGFLPRNIACGWWHTLLLAETTQI 467
           LG G      +P L+    + G   + ++CG  H+ +LAE  Q+
Sbjct: 394 LGTGTDHAEILPRLLGGQNLEGKYAKAVSCGARHSAVLAEDGQL 437


>gi|326511212|dbj|BAJ87620.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 511

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 277/484 (57%), Positives = 356/484 (73%), Gaps = 35/484 (7%)

Query: 13  KMEECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSES 69
           + E  K  VV MWGYLPG SP++SP+L P+P RL     GD+W+DVCGGGCGFA+A SES
Sbjct: 29  REEAGKGQVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAGDAWRDVCGGGCGFAMAISES 88

Query: 70  GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           GKL+TWGS DD GQSY+T+GKH ETPE FPLP++ ++ +A AGWAHCV++T+ G VYTWG
Sbjct: 89  GKLLTWGSTDDMGQSYVTAGKHEETPEAFPLPSDVAIARADAGWAHCVAITDEGVVYTWG 148

Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ------------------------- 164
           W+ECVP+ +V  D  S G+ +KD   +QSA   +Q                         
Sbjct: 149 WKECVPTGRVIADQASVGTLEKDE--RQSASANDQGISHNKGNSIAVSPRSQVSRTSSGA 206

Query: 165 -APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
            + PS+ R  E+  KRR+ SSA++ +++  SGDE  +  PC+VT N GVKIT VAAGGRH
Sbjct: 207 ASGPSESRGTEDSTKRRRLSSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRH 266

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           TL LSD GQVWGWGYGGEGQLGLGSRI+ V +PH IPC+E A+  KDRP  ++ G+ N+ 
Sbjct: 267 TLALSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHTIPCIESASYSKDRPSAMK-GNKNAE 325

Query: 284 GKAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
           G+  +   S V  IACGGRHS VVTD+GALL FGWGLYGQCG G+T+D L P+  S+++ 
Sbjct: 326 GQINKVMGSRVTAIACGGRHSVVVTDSGALLAFGWGLYGQCGQGNTDDVLSPTCVSAILG 385

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           ++++ +AAGLWHTV IS +G VY FGGNQFGQLG G DQAE +PKL++ P LE+K A+ V
Sbjct: 386 VKMQDVAAGLWHTVSISADGDVYSFGGNQFGQLGIGSDQAETIPKLVDAPSLENKNARSV 445

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           SCGARHSA++T++G+V  WGWNKYGQLGLGDS+DRN+P +VP+ G+ P N++ GWWHTL+
Sbjct: 446 SCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCIVPVDGYHPLNVSGGWWHTLV 505

Query: 461 LAET 464
           LAE+
Sbjct: 506 LAES 509


>gi|357125846|ref|XP_003564600.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
           1 [Brachypodium distachyon]
          Length = 499

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 278/469 (59%), Positives = 349/469 (74%), Gaps = 25/469 (5%)

Query: 18  KETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKLIT 74
           KE VV MWGYLPG SP++SP+L+P+P RL     GD+W+DVCGGGCGFA+A SESGKL+T
Sbjct: 32  KEQVVLMWGYLPGVSPQRSPLLAPVPVRLPLAATGDAWRDVCGGGCGFAMAISESGKLLT 91

Query: 75  WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
           WGS DD GQSY+T+GKH ETPE FPLP++  + +A  GWAHCV++TE G VYTWGW+ECV
Sbjct: 92  WGSTDDMGQSYVTAGKHEETPEAFPLPSDVVIARADTGWAHCVAITEEGVVYTWGWKECV 151

Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP----------------SDKRAGEEVVK 178
           P+  V  D  S G+ ++D +  QSA  + Q  P                S+ R  EE  K
Sbjct: 152 PTGTVIADQSSVGTLERDES--QSASASNQVSPRSHVSSRTSSGAASGPSESRGAEESTK 209

Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
           RR+ SSA++  ++  S DE  +  PC+VT N GVKIT VAAGGRHTL LSD GQVWGWGY
Sbjct: 210 RRRLSSAKQGPDSSTSSDENLSAPPCIVTFNTGVKITAVAAGGRHTLALSDFGQVWGWGY 269

Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIA 295
           GGEGQLGLGSRI+ V +PH IPC+E A  GKDRP  ++ G+ N+  +  +   + VK IA
Sbjct: 270 GGEGQLGLGSRIRTVSSPHPIPCIESALYGKDRPAAMK-GNKNAETQISKVMGNCVKAIA 328

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGGRHS VVTD+G LLTFGWGLYGQCG G+T+D L P+  SS++ +++E  AAGLWHTVC
Sbjct: 329 CGGRHSVVVTDSGTLLTFGWGLYGQCGQGNTDDVLSPTCVSSILGVKMEGAAAGLWHTVC 388

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ISV+G VY FGGNQFGQLGTG D+AE VPKL++   LE+K A+ VSCGARHSA++T++ +
Sbjct: 389 ISVDGDVYSFGGNQFGQLGTGSDEAETVPKLVDASCLENKNARTVSCGARHSAIITDESE 448

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           V  WGWNKYGQLGLGDS+DRN+P +VP+  +   N++CGWWHTL+LAE+
Sbjct: 449 VFCWGWNKYGQLGLGDSMDRNVPCIVPMDAYRALNVSCGWWHTLVLAES 497


>gi|357125848|ref|XP_003564601.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
           2 [Brachypodium distachyon]
          Length = 518

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 278/488 (56%), Positives = 349/488 (71%), Gaps = 44/488 (9%)

Query: 18  KETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKLIT 74
           KE VV MWGYLPG SP++SP+L+P+P RL     GD+W+DVCGGGCGFA+A SESGKL+T
Sbjct: 32  KEQVVLMWGYLPGVSPQRSPLLAPVPVRLPLAATGDAWRDVCGGGCGFAMAISESGKLLT 91

Query: 75  WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
           WGS DD GQSY+T+GKH ETPE FPLP++  + +A  GWAHCV++TE G VYTWGW+ECV
Sbjct: 92  WGSTDDMGQSYVTAGKHEETPEAFPLPSDVVIARADTGWAHCVAITEEGVVYTWGWKECV 151

Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP---------------------------- 166
           P+  V  D  S G+ ++D +  QSA  + Q                              
Sbjct: 152 PTGTVIADQSSVGTLERDES--QSASASNQGESFSALILYRYNKGNSIAVSPRSHVSSRT 209

Query: 167 -------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
                  PS+ R  EE  KRR+ SSA++  ++  S DE  +  PC+VT N GVKIT VAA
Sbjct: 210 SSGAASGPSESRGAEESTKRRRLSSAKQGPDSSTSSDENLSAPPCIVTFNTGVKITAVAA 269

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           GGRHTL LSD GQVWGWGYGGEGQLGLGSRI+ V +PH IPC+E A  GKDRP  ++ G+
Sbjct: 270 GGRHTLALSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYGKDRPAAMK-GN 328

Query: 280 VNSSGKAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
            N+  +  +   + VK IACGGRHS VVTD+G LLTFGWGLYGQCG G+T+D L P+  S
Sbjct: 329 KNAETQISKVMGNCVKAIACGGRHSVVVTDSGTLLTFGWGLYGQCGQGNTDDVLSPTCVS 388

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
           S++ +++E  AAGLWHTVCISV+G VY FGGNQFGQLGTG D+AE VPKL++   LE+K 
Sbjct: 389 SILGVKMEGAAAGLWHTVCISVDGDVYSFGGNQFGQLGTGSDEAETVPKLVDASCLENKN 448

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWW 456
           A+ VSCGARHSA++T++ +V  WGWNKYGQLGLGDS+DRN+P +VP+  +   N++CGWW
Sbjct: 449 ARTVSCGARHSAIITDESEVFCWGWNKYGQLGLGDSMDRNVPCIVPMDAYRALNVSCGWW 508

Query: 457 HTLLLAET 464
           HTL+LAE+
Sbjct: 509 HTLVLAES 516


>gi|242054967|ref|XP_002456629.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
 gi|241928604|gb|EES01749.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
          Length = 503

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 279/473 (58%), Positives = 352/473 (74%), Gaps = 29/473 (6%)

Query: 18  KETVVYMWGYLPGTSPEKSPILSPIPARL------CGGDSWKDVCGGGCGFALATSESGK 71
           KE VV MWGYLPG SP++SP+L P+P RL        GD W+DVCGGGCGFA+A SESGK
Sbjct: 32  KERVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAAAAGDGWRDVCGGGCGFAMAISESGK 91

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           L+TWGSADD GQSY+T+GKH ETPE FPLP+  ++V+A AGWAHCV++T+ G+VYTWGW+
Sbjct: 92  LLTWGSADDMGQSYVTAGKHEETPEAFPLPSGVAIVRADAGWAHCVAITDEGDVYTWGWK 151

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS---------------DKRAGEEV 176
           ECVP+ +V  D  S G+ +KD   +Q A+ T+Q  P                + R  ++ 
Sbjct: 152 ECVPTGRVIGDQSSVGTMEKDE--RQMAMATDQVSPRSQVSRTSSGAASGPPESRGTDDS 209

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS--DMGQVW 234
            KRR+ SSA+   E+  S DE  +  PC+VT N GVKI  VAAGGRHTL LS  D+GQVW
Sbjct: 210 TKRRRLSSAKHGPESSTSSDESLSAPPCVVTFNTGVKIVSVAAGGRHTLALSASDLGQVW 269

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYV 291
           GWGYGGEGQLGLGSRI+ V +PH +PC+E A   KDRP  ++ G+  + G   +   + V
Sbjct: 270 GWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYSKDRPSAMK-GNKAAEGHVSKVLGNCV 328

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           + IACGGRHSAVVTD+GALLTFGWGLYGQCG G+T+D L P+  SS++ I+++ +AAGLW
Sbjct: 329 RAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAGLW 388

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           HTVC SV+G VY FGGNQFGQLGTG DQAE VPKL++   LE+K A+ VSCGARHSA++T
Sbjct: 389 HTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDATSLENKNARSVSCGARHSAIIT 448

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           ++G+V  WGWNKYGQLGLGDS+DRN+P  VP+  + P N++CGWWHTL+LAE+
Sbjct: 449 DEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNVSCGWWHTLVLAES 501


>gi|110740523|dbj|BAE98367.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 488

 Score =  566 bits (1459), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 277/464 (59%), Positives = 339/464 (73%), Gaps = 23/464 (4%)

Query: 19  ETVVYMWGYLPGTSPEKSPILSPIPARLCGG--DSWKDVCGGGCGFALATSESGKLITWG 76
           + VVYMWGYLPG SP++SP++SP+  ++      SWKDV GGGCGFA+AT+ESGKLITWG
Sbjct: 30  QRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLITWG 89

Query: 77  SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
           S DD GQSY+TSGKHGETPEPFPLP E  V KA AGWAHCV+VTE  +VYTWGWREC+P+
Sbjct: 90  STDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPT 149

Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQ--------------APPSDKRAGEEVVKRRKT 182
            +V R          DS  +  +  TEQ              +   + R G E  K+R+ 
Sbjct: 150 GRVFRQV------DGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEPTKKRRI 203

Query: 183 SSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
           S +++ +EN +  D    +  PCLV+L PGV+I  VAAGGRHTL LSD+GQVWGWGYGGE
Sbjct: 204 SPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGE 263

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           GQLGLGSR+++V +PH IPC+E ++ GK     V   SV   G+   SYVK+IACGGRHS
Sbjct: 264 GQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHS 323

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           AV+TD GALLTFGWGLYGQCG GST+D+L P+  SSL+ I++E++AAGLWHT C S +G 
Sbjct: 324 AVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGD 383

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           VY FGGNQFGQLGTG DQAE +PKLLE P LE+   K +SCGARH+AV+T++G+V  WGW
Sbjct: 384 VYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGW 443

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETT 465
           NKYGQLG+GD IDRN P+ V I    P+NIACGWWHTLLL + T
Sbjct: 444 NKYGQLGIGDVIDRNAPAEVRIKDCFPKNIACGWWHTLLLGQPT 487


>gi|15233306|ref|NP_191117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7076801|emb|CAB75916.1| Regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|332645883|gb|AEE79404.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 277/464 (59%), Positives = 339/464 (73%), Gaps = 23/464 (4%)

Query: 19  ETVVYMWGYLPGTSPEKSPILSPIPARLCGG--DSWKDVCGGGCGFALATSESGKLITWG 76
           + VVYMWGYLPG SP++SP++SP+  ++      SWKDV GGGCGFA+AT+ESGKLITWG
Sbjct: 30  QRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLITWG 89

Query: 77  SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
           S DD GQSY+TSGKHGETPEPFPLP E  V KA AGWAHCV+VTE  +VYTWGWREC+P+
Sbjct: 90  STDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPT 149

Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQ--------------APPSDKRAGEEVVKRRKT 182
            +V       G    DS  +  +  TEQ              +   + R G E  K+R+ 
Sbjct: 150 GRVF------GQVDGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEPTKKRRI 203

Query: 183 SSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
           S +++ +EN +  D    +  PCLV+L PGV+I  VAAGGRHTL LSD+GQVWGWGYGGE
Sbjct: 204 SPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGE 263

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           GQLGLGSR+++V +PH IPC+E ++ GK     V   SV   G+   SYVK+IACGGRHS
Sbjct: 264 GQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHS 323

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           AV+TD GALLTFGWGLYGQCG GST+D+L P+  SSL+ I++E++AAGLWHT C S +G 
Sbjct: 324 AVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGD 383

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           VY FGGNQFGQLGTG DQAE +PKLLE P LE+   K +SCGARH+AV+T++G+V  WGW
Sbjct: 384 VYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGW 443

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETT 465
           NKYGQLG+GD IDRN P+ V I    P+NIACGWWHTLLL + T
Sbjct: 444 NKYGQLGIGDVIDRNAPAEVRIKDCFPKNIACGWWHTLLLGQPT 487


>gi|297816858|ref|XP_002876312.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297322150|gb|EFH52571.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 482

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 278/470 (59%), Positives = 344/470 (73%), Gaps = 21/470 (4%)

Query: 11  NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGG--DSWKDVCGGGCGFALATSE 68
            E+ E   + +VYMWGYLPG S ++SP++SP+  ++      SWKDV GGGCGFA+AT+E
Sbjct: 18  QEEEEVVGQRLVYMWGYLPGASQQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAE 77

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
           SGKLITWGS DD GQSY+TSGKHGETPEPFPLP E  V KA AGWAHCV+VTE  EVYTW
Sbjct: 78  SGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQEVYTW 137

Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK------------RAGEEV 176
           GWREC+P+ +V   FG A     DS  +  +  TEQ  P+ +             A  E 
Sbjct: 138 GWRECIPTGRV---FGQA---DGDSCERNISFSTEQVSPTCQGRKSSGGTSYQVEARGEP 191

Query: 177 VKRRKTSSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
            K+R+ S +++ +EN +  D    +  PCLV+L PGV+I  VAAGGRHTL LSD+GQVWG
Sbjct: 192 TKKRRISPSKQAAENASQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWG 251

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WGYGGEGQLGLGSR+++V +PH IPC+E ++ GK     V   S     +   SYVK+IA
Sbjct: 252 WGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSEVQCARVLGSYVKKIA 311

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGGRHSAV+TD GALLTFGWGLYGQCG GST+D+L P+  SSL+ I++E++AAGLWHT+C
Sbjct: 312 CGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTIC 371

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
            S +G VY FGGNQFGQLGTG DQAE +PKLLE P LE+   K++SCGARH+AV+ ++G+
Sbjct: 372 ASADGDVYSFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKIISCGARHTAVIADEGK 431

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETT 465
           V  WGWNKYGQLGLGD IDRN PS V I   +P+NIACGWWHTLLL +++
Sbjct: 432 VFCWGWNKYGQLGLGDVIDRNAPSEVRIKDCVPKNIACGWWHTLLLGQSS 481


>gi|413951961|gb|AFW84610.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 588

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 276/471 (58%), Positives = 349/471 (74%), Gaps = 27/471 (5%)

Query: 18  KETVVYMWGYLPGTSPEKSPILSPIPARL------CGGDSWKDVCGGGCGFALATSESGK 71
           KE VV MWGYLPG SP++SP+L P+P RL        GD W+DVCGGGCGFA+A SESGK
Sbjct: 119 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPPTAATAAGDGWRDVCGGGCGFAMAISESGK 178

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           L+TWGSADD GQSY+T+GKH ETPE FPLP+   +V+A AGWAHCV++T+  +VYTWGW+
Sbjct: 179 LLTWGSADDMGQSYVTAGKHEETPEAFPLPSSVVIVRADAGWAHCVAITDEYDVYTWGWK 238

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEV 176
           ECVP+ +V  D  S G+ +KD   +Q A+ T+Q  P               S+ R  ++ 
Sbjct: 239 ECVPTGRVIGDQSSVGTMEKDE--RQMAMATDQVSPRSQVSRTSSGAAAGSSESRGTDDS 296

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
            KRRK S A+   E+  S DE  +  PC+VT + GVKI  VAAGGRHTL LSD+GQVWGW
Sbjct: 297 TKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALSDLGQVWGW 356

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKE 293
           GYGGEGQLGLGSRI+ V +PH +PC+E A   KDRP  ++ G+  + G   +   + V+ 
Sbjct: 357 GYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAMK-GNKAAEGHVSKVLGNCVRA 415

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           IACGGRHSAVVTD+GALLTFGWGLYGQCG G+T+D L P+  SS++ I+++ +AAGLWHT
Sbjct: 416 IACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAGLWHT 475

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           VC SV+G VY FGGNQFGQLGTG DQAE +PKL++   LE+K A+ VSCGARHSA++T++
Sbjct: 476 VCTSVDGDVYSFGGNQFGQLGTGSDQAETLPKLVDATSLENKNARSVSCGARHSAIITDE 535

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           G+V  WGWNKYGQLGLGDS+DRN+P  V +  + P N++CGWWHTL+LAE+
Sbjct: 536 GEVFCWGWNKYGQLGLGDSMDRNVPCSVRVDAYHPLNVSCGWWHTLVLAES 586


>gi|222631832|gb|EEE63964.1| hypothetical protein OsJ_18789 [Oryza sativa Japonica Group]
          Length = 479

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 274/468 (58%), Positives = 342/468 (73%), Gaps = 25/468 (5%)

Query: 18  KETVVYMWGYLPGTSPEKSPILSPIPARL-----CGGDSWKDVCGGGCGFALATSESGKL 72
           KE VV MWGYLPG S ++SP+L P+P R+       GD+W+DV GGGCGFA+A SE GKL
Sbjct: 12  KERVVLMWGYLPGVSQQRSPLLGPVPVRMPDAAAAAGDAWRDVAGGGCGFAMAVSEQGKL 71

Query: 73  ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
            TWGS DD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T  G+VYTWGW+E
Sbjct: 72  FTWGSTDDMGQSYVTAGKHEETPEAFPLPSDIAIVRADAGWAHCVAITGKGDVYTWGWKE 131

Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------------RAGEEVV 177
           CVP+ +V  D  + G+   D   +QS + T+Q  P  K               R+ E+  
Sbjct: 132 CVPTGRVIADHSATGAMDCDK--RQSGVATDQVSPRSKVSRTSTKAASGPAESRSSEDST 189

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
           KRR+ SS++  +E+ +S DE  +  PC+VT N GVKI +VAAGGRHTL+LSD GQVWGWG
Sbjct: 190 KRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLSDFGQVWGWG 249

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY--VKEIA 295
           YGGEGQLGLGSRI+ V +PH IPC++ A   KDR  +V  GS    G   R+   VK IA
Sbjct: 250 YGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTGIV-MGSRTLEGTNDRAATCVKAIA 308

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGGRHSAVVTD+G LLTFGWGLYGQCG G+T+D L P+  S++M ++++++AAGLWHTVC
Sbjct: 309 CGGRHSAVVTDSGTLLTFGWGLYGQCGQGNTDDILSPTCVSAIMGVKIQRVAAGLWHTVC 368

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
            S +G VY FGGNQFGQLGTG DQAE VPKL+E   LE+  A+ VSCGARHSAV+T+ G 
Sbjct: 369 TSADGDVYSFGGNQFGQLGTGSDQAEIVPKLVEASKLENNHARGVSCGARHSAVITDKGD 428

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           V  WGWNKYGQLGLGDS DRN+P  VP+  + P N++CGWWHTL+LAE
Sbjct: 429 VFCWGWNKYGQLGLGDSTDRNVPCQVPVEAYNPLNVSCGWWHTLVLAE 476


>gi|218196915|gb|EEC79342.1| hypothetical protein OsI_20201 [Oryza sativa Indica Group]
          Length = 484

 Score =  560 bits (1442), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 274/473 (57%), Positives = 345/473 (72%), Gaps = 30/473 (6%)

Query: 18  KETVVYMWGYLPGTSPEKSPILSPIPARL-----CGGDSWKDVCGGGCGFALATSESGKL 72
           KE VV MWGYLPG S ++SP+L P+P R+       GD+W+DV GGGCGFA+A SE GKL
Sbjct: 12  KERVVLMWGYLPGVSQQRSPLLGPVPVRMPDAAAAAGDAWRDVAGGGCGFAMAVSEQGKL 71

Query: 73  ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
            TWGS DD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T  G+VYTWGW+E
Sbjct: 72  FTWGSTDDMGQSYVTAGKHEETPEAFPLPSDIAIVRADAGWAHCVAITGKGDVYTWGWKE 131

Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ--------------------APPSDKRA 172
           CVP+ +V  D  + G+   D   +QS + T+Q                    + P++ R+
Sbjct: 132 CVPTGRVIADHSATGAMDCDK--RQSGVATDQGNSITVSPRSKVSRTSTKAASGPAESRS 189

Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
            E+  KRR+ SS++  +E+ +S DE  +  PC+VT N GVKI +VAAGGRHTL+LSD GQ
Sbjct: 190 SEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLSDFGQ 249

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-- 290
           VWGWGYGGEGQLGLGSRI+ V +PH IPC++ A   KDR  +V  GS    G   R+   
Sbjct: 250 VWGWGYGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTGIV-MGSRTLEGTNDRAATC 308

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           VK IACGGRHSAVVTD+G LLTFGWGLYGQCG G+T+D L P+  S++M ++++++AAGL
Sbjct: 309 VKAIACGGRHSAVVTDSGTLLTFGWGLYGQCGQGNTDDILSPTCVSAIMGVKIQRVAAGL 368

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           WHTVC S +G VY FGGNQFGQLGTG DQAE VPKL+E   LE+K A+ VSCGARHSAV+
Sbjct: 369 WHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIVPKLVEASKLENKHARGVSCGARHSAVI 428

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           T+ G V  WGWNKYGQLGLGDS DRN+P  VP+  + P N++CGWWHTL+LAE
Sbjct: 429 TDKGDVFCWGWNKYGQLGLGDSTDRNVPCQVPVEAYNPLNVSCGWWHTLVLAE 481


>gi|222619534|gb|EEE55666.1| hypothetical protein OsJ_04066 [Oryza sativa Japonica Group]
          Length = 418

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/418 (58%), Positives = 312/418 (74%), Gaps = 19/418 (4%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
           +A SESGKL+TWGSADD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T+ G
Sbjct: 1   MAISESGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSDVAIVRADAGWAHCVAITDEG 60

Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---------------S 168
           +VYTWGW+ECVP+ +V  D  S G+ +KD   +QSA+  +Q  P               S
Sbjct: 61  DVYTWGWKECVPTGRVISDQSSGGTLEKDE--RQSAIAADQVSPRSQVSRTSSGAASGPS 118

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           + R  ++  KRR+ SS +   E+  S DE  +  PC+VT N GVKI  VAAGGRHTL LS
Sbjct: 119 ESRGTDDSTKRRRLSSTKHAPESSTSSDENLSAPPCVVTFNTGVKIMAVAAGGRHTLALS 178

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR--QGSVNSSGKA 286
           D+GQVWGWGYGGEGQLGLGSRI+ V +PH IPC+E A   KDRP  ++  + +     K 
Sbjct: 179 DLGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYSKDRPAAMKGNKSAEVQISKV 238

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
             + VK IACGGRHSAVVTD+GALLTFGWGLYGQCG G+T+D L P+  SS++ ++++ I
Sbjct: 239 MGNCVKAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGVKMQDI 298

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
            AGLWHTVC SV+G VY FGGNQFGQLGTG DQAE VPKL++   LE+K A+ VSCGARH
Sbjct: 299 GAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASSLENKNARAVSCGARH 358

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           SA++T++G+V  WGWNKYGQLGLGDS+DRN+P  VP+  + P N++CGWWHTL+LAE+
Sbjct: 359 SAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNVSCGWWHTLVLAES 416


>gi|218189368|gb|EEC71795.1| hypothetical protein OsI_04422 [Oryza sativa Indica Group]
          Length = 427

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 248/424 (58%), Positives = 314/424 (74%), Gaps = 25/424 (5%)

Query: 61  GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
           G+  A ++SGKL+TWGSADD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T
Sbjct: 7   GWLAAAAQSGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSDVAIVRADAGWAHCVAIT 66

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP------------- 167
           + G+VYTWGW+ECVP+ +V  D  S G+ +KD   +QSA+  +Q  P             
Sbjct: 67  DEGDVYTWGWKECVPTGRVISDQSSGGTLEKDE--RQSAIAADQVSPRSQVSRTSSGAAS 124

Query: 168 --SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
             S+ R  ++  KRR+ SS +   E+  S DE  +  PC+VT N GVKI  VAAGGRHTL
Sbjct: 125 GPSESRGTDDSTKRRRLSSTKHAPESSTSSDENLSAPPCVVTFNTGVKIMAVAAGGRHTL 184

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            LSD+GQVWGWGYGGEGQLGLGSRI+ V +PH IPC+E A   KDRP  ++    N S +
Sbjct: 185 ALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYSKDRPAAMKG---NKSAE 241

Query: 286 AGRSYV-----KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
           A  S V     K IACGGRHSAVVTD+GALLTFGWGLYGQCG G+T+D L P+  SS++ 
Sbjct: 242 AQISKVMGNCVKAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILG 301

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           ++++ I AGLWHTVC SV+G VY FGGNQFGQLGTG DQAE VPKL++   LE+K A+ V
Sbjct: 302 VKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASSLENKNARAV 361

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           SCGARHSA++T++G+V  WGWNKYGQLGLGDS+DRN+P  VP+  + P N++CGWWHTL+
Sbjct: 362 SCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNVSCGWWHTLV 421

Query: 461 LAET 464
           LAE+
Sbjct: 422 LAES 425


>gi|413951960|gb|AFW84609.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 552

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 254/435 (58%), Positives = 320/435 (73%), Gaps = 27/435 (6%)

Query: 18  KETVVYMWGYLPGTSPEKSPILSPIPARL------CGGDSWKDVCGGGCGFALATSESGK 71
           KE VV MWGYLPG SP++SP+L P+P RL        GD W+DVCGGGCGFA+A SESGK
Sbjct: 119 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPPTAATAAGDGWRDVCGGGCGFAMAISESGK 178

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           L+TWGSADD GQSY+T+GKH ETPE FPLP+   +V+A AGWAHCV++T+  +VYTWGW+
Sbjct: 179 LLTWGSADDMGQSYVTAGKHEETPEAFPLPSSVVIVRADAGWAHCVAITDEYDVYTWGWK 238

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEV 176
           ECVP+ +V  D  S G+ +KD   +Q A+ T+Q  P               S+ R  ++ 
Sbjct: 239 ECVPTGRVIGDQSSVGTMEKDE--RQMAMATDQVSPRSQVSRTSSGAAAGSSESRGTDDS 296

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
            KRRK S A+   E+  S DE  +  PC+VT + GVKI  VAAGGRHTL LSD+GQVWGW
Sbjct: 297 TKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALSDLGQVWGW 356

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKE 293
           GYGGEGQLGLGSRI+ V +PH +PC+E A   KDRP  ++ G+  + G   +   + V+ 
Sbjct: 357 GYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAMK-GNKAAEGHVSKVLGNCVRA 415

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           IACGGRHSAVVTD+GALLTFGWGLYGQCG G+T+D L P+  SS++ I+++ +AAGLWHT
Sbjct: 416 IACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAGLWHT 475

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           VC SV+G VY FGGNQFGQLGTG DQAE +PKL++   LE+K A+ VSCGARHSA++T++
Sbjct: 476 VCTSVDGDVYSFGGNQFGQLGTGSDQAETLPKLVDATSLENKNARSVSCGARHSAIITDE 535

Query: 414 GQVLSWGWNKYGQLG 428
           G+V  WGWNKYGQ+G
Sbjct: 536 GEVFCWGWNKYGQVG 550



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 28/170 (16%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +  +A GGRH+  ++D G +  +G+G  GQ G GS     R    SS   +   + A   
Sbjct: 334 IVAVAAGGRHTLALSDLGQVWGWGYGGEGQLGLGS-----RIRTVSSPHPVPCIESA--- 385

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
                +  + R     GN+  +         +V K+L   +      + ++CG RHSAV+
Sbjct: 386 -----LYTKDRPSAMKGNKAAE--------GHVSKVLGNCV------RAIACGGRHSAVV 426

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
           T+ G +L++GW  YGQ G G++ D   P+ V  I G   +++A G WHT+
Sbjct: 427 TDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAGLWHTV 476


>gi|168016500|ref|XP_001760787.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688147|gb|EDQ74526.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 445

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/450 (53%), Positives = 300/450 (66%), Gaps = 25/450 (5%)

Query: 24  MWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
           MWGYLP  SP+++P+L P P  +    D  K VC GGCGF +A SESGKL TWGS  + G
Sbjct: 1   MWGYLPAASPQRAPLLQPTPVPVTPLNDPLKTVCNGGCGFGIAISESGKLNTWGSTTELG 60

Query: 83  QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
           Q YL SGK  E PEP+PLPTE+ +V+AA GWAHC +VT  GEV+TWGW ECVPS + T D
Sbjct: 61  QCYLISGKQQELPEPYPLPTESPIVQAAGGWAHCAAVTGGGEVFTWGWSECVPSIQPTPD 120

Query: 143 FGSAGSFQKDSTGKQSALPTEQ---APPSDKRAGEEVVKRRKTSSAR--EESENPASGDE 197
                     S  KQS   T +      +D +  EE++K+RK  S    E  E+P + +E
Sbjct: 121 ESEQVQGDDASACKQSGRQTHRNLTCKTTDSKGAEEILKKRKIVSFEHGESPESPTAAEE 180

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSD------MGQVWGWGYGGEGQLGLGSRIK 251
                PCLV L+PG++I+ VAAGGRHTL LS       +G VWGWGYGGEGQLGLG+R++
Sbjct: 181 NVFAPPCLVNLDPGIRISIVAAGGRHTLALSGEFSFKYVGHVWGWGYGGEGQLGLGTRMR 240

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK-AGRSYVKEIACGGRHSAVVTDAGAL 310
           +V +P LIPC     +G           ++SSG     S +K IACGGRHSA+VTDAGAL
Sbjct: 241 IVSSPQLIPCFNSPENG-----------ISSSGAPIPGSSIKAIACGGRHSAIVTDAGAL 289

Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
           LTFGWGLYGQ G GS  D+L P   S++  +QV  IAAGLWHT+CI+  G VY FGGNQF
Sbjct: 290 LTFGWGLYGQVGQGSNEDELSPCLVSAMGGLQVTGIAAGLWHTLCITDIGDVYAFGGNQF 349

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           GQLG G + AE  P+L++ P+LE +    V+CGARHS VLT  G++ +WGWNKYGQLGLG
Sbjct: 350 GQLGVGGNSAEMSPRLIDAPLLEDESCVAVACGARHSVVLTGSGKIFAWGWNKYGQLGLG 409

Query: 431 DSIDRNIPSLVPIH-GFLPRNIACGWWHTL 459
           D+ +R++P  V ++ G    NIACGWWHTL
Sbjct: 410 DNNNRDLPVQVTMNDGGRAANIACGWWHTL 439



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 20/147 (13%)

Query: 341 IQVEQIAAGLWHTVCISVE------GRVYVFGGNQFGQLGTGVD-QAENVPKLL------ 387
           I++  +AAG  HT+ +S E      G V+ +G    GQLG G   +  + P+L+      
Sbjct: 195 IRISIVAAGGRHTLALSGEFSFKYVGHVWGWGYGGEGQLGLGTRMRIVSSPQLIPCFNSP 254

Query: 388 ETPILES------KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           E  I  S         K ++CG RHSA++T+ G +L++GW  YGQ+G G + D   P LV
Sbjct: 255 ENGISSSGAPIPGSSIKAIACGGRHSAIVTDAGALLTFGWGLYGQVGQGSNEDELSPCLV 314

Query: 442 PIHGFLP-RNIACGWWHTLLLAETTQI 467
              G L    IA G WHTL + +   +
Sbjct: 315 SAMGGLQVTGIAAGLWHTLCITDIGDV 341


>gi|414879725|tpg|DAA56856.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 431

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/431 (53%), Positives = 297/431 (68%), Gaps = 51/431 (11%)

Query: 82  GQSYLTSGKH-----------------------------GETPEPFPLPTEASVVKAAAG 112
           GQSY+T+GKH                              ETPE FPLP   ++V+A AG
Sbjct: 2   GQSYVTAGKHEVITLMLSCFPAPCEKVQDLLLKIEYYTSQETPEAFPLPRGVAIVRADAG 61

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-------- 164
           WAHCV++T+ G+VYTWGW+ECVP+ +V  D  S G+ +KD   +Q A+ T+Q        
Sbjct: 62  WAHCVAITDEGDVYTWGWKECVPTGRVIGDQSSVGTKEKDE--RQMAMATDQGVSPRSQV 119

Query: 165 --------APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
                   + PS+ R  ++  KRR+ SSA+   E+  S DE  +  PC+VT N GVKI  
Sbjct: 120 SRTSSGAASGPSESRGTDDSTKRRRLSSAKHGPESSTSSDESLSAPPCVVTFNTGVKIVS 179

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           VAAGGRHTL LSD+GQVWGWGYGGEGQLGLGSRI+ V +PH +PC+E A   KDRP  ++
Sbjct: 180 VAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYSKDRPSAMK 239

Query: 277 QGSVNSSGKAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
            G+  + G   +   + V+ IACGGRHSA VTD+GALLTFGWGLYGQCG G+T+D L P+
Sbjct: 240 -GNKAAEGHVSKVLGNCVRAIACGGRHSAAVTDSGALLTFGWGLYGQCGQGNTDDVLSPT 298

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
             SS++  +++ +AAGLWHTVC SV+G VY FGGNQFGQLGTG DQAE VPKL++   LE
Sbjct: 299 CVSSILGSKMQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDATSLE 358

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC 453
           +K A+ VSCGARHSA++T++G+V  WGWNKYGQLGLGDS+DRN+P  VP+  + P N++C
Sbjct: 359 NKNARSVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNVSC 418

Query: 454 GWWHTLLLAET 464
           GWWHTL+LA++
Sbjct: 419 GWWHTLVLADS 429


>gi|168046566|ref|XP_001775744.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672896|gb|EDQ59427.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 441

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/465 (50%), Positives = 292/465 (62%), Gaps = 41/465 (8%)

Query: 10  ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL-CGGDSWKDVCGGGCGFALATSE 68
           EN    EC    V MWGYLP  SP+++P+L P P  +    D  K VC GGCGF +A SE
Sbjct: 7   ENAAAGECS---VRMWGYLPAASPQRTPLLQPTPVPVSVLNDPLKTVCNGGCGFGIAISE 63

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
           SG L TWGS  D G  YL SGK  E PE +PLPT++ +V AA GWAHC +VT  GEVYTW
Sbjct: 64  SGNLNTWGSTTDHGHCYLISGKQQEVPELYPLPTDSPIVHAAGGWAHCAAVTGDGEVYTW 123

Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
           GW EC                    TGKQ+ L       +     EEV+KRRK  +   E
Sbjct: 124 GWSECT-----------------KPTGKQT-LRNLACKTTGSDGAEEVIKRRKVITNSAE 165

Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD--------MGQVWGWGYGG 240
            ++P + +E     PCLV L+PG++I+ VAAGGRHTL LSD        +GQVWGWGYGG
Sbjct: 166 GQSPEASEENAFAPPCLVKLDPGIRISSVAAGGRHTLALSDNTNHMETDVGQVWGWGYGG 225

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           EGQLGLGS I++V  P  IPC     +G  R  +   GS          Y+K IACGGRH
Sbjct: 226 EGQLGLGSCIRIVSFPQHIPCFNMTDTGNARSGVPIPGS----------YIKAIACGGRH 275

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           SAV+TD GA+LTFGWGLYGQ G GST D+L PS+ S+L  + +  IAAGLWHT+CI+  G
Sbjct: 276 SAVITDTGAVLTFGWGLYGQIGQGSTEDELSPSHVSTLQGLSIVGIAAGLWHTLCITNTG 335

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            VY FGGNQFGQLG G + AE  P+L++ P+L  + +  V+CGARHS VLT  G++ +WG
Sbjct: 336 DVYSFGGNQFGQLGVGGNNAELSPRLIDAPLLGDELSVAVACGARHSVVLTGSGKIFAWG 395

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAET 464
           WNKYGQLGLGD  +R++P  V ++ G    +IACGWWHTL    T
Sbjct: 396 WNKYGQLGLGDCNNRDLPMQVTMNDGGRAASIACGWWHTLASVRT 440



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 22/149 (14%)

Query: 341 IQVEQIAAGLWHTVCISVE--------GRVYVFGGNQFGQLGTG-----VDQAENVPKLL 387
           I++  +AAG  HT+ +S          G+V+ +G    GQLG G     V   +++P   
Sbjct: 189 IRISSVAAGGRHTLALSDNTNHMETDVGQVWGWGYGGEGQLGLGSCIRIVSFPQHIPCFN 248

Query: 388 ETPILESKRA--------KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
            T    ++          K ++CG RHSAV+T+ G VL++GW  YGQ+G G + D   PS
Sbjct: 249 MTDTGNARSGVPIPGSYIKAIACGGRHSAVITDTGAVLTFGWGLYGQIGQGSTEDELSPS 308

Query: 440 LVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            V  + G     IA G WHTL +  T  +
Sbjct: 309 HVSTLQGLSIVGIAAGLWHTLCITNTGDV 337


>gi|302765727|ref|XP_002966284.1| hypothetical protein SELMODRAFT_85679 [Selaginella moellendorffii]
 gi|300165704|gb|EFJ32311.1| hypothetical protein SELMODRAFT_85679 [Selaginella moellendorffii]
          Length = 453

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/464 (52%), Positives = 301/464 (64%), Gaps = 27/464 (5%)

Query: 13  KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGK 71
           +++  ++  V MWGYLP +SP++SPI+ P         D W+ VC GGCGFALA SESGK
Sbjct: 2   EIQGTRKLGVRMWGYLPASSPQRSPIVVPTKVSPASPDDGWRAVCSGGCGFALALSESGK 61

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           L TWGS DD GQ Y  SGKH E PEPFPL T  ++  AAAGWAHC  VTE GEVYTWGW+
Sbjct: 62  LHTWGSTDDLGQCYHISGKHQEHPEPFPLQTPPAIF-AAAGWAHCAVVTETGEVYTWGWK 120

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALP-----TEQAPPSDKRAGEEVVKRRKTSSAR 186
           ECVPS K   + G +G    D  G+   L       + +P     A  +  K+RK S+  
Sbjct: 121 ECVPSDKNCVEQGVSGD-PYDYQGRTEELKHVEPDLDSSPGHSPEALLDSSKKRKVST-- 177

Query: 187 EESENPASG----DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS---DMGQVWGWGYG 239
           +E+ +P S     DE      C V +    K+  VA GGRHT +L    D GQVW WGYG
Sbjct: 178 DEAGSPDSSGAGVDEAVVAPLCCVPMP--AKVILVATGGRHTFVLFRILDTGQVWSWGYG 235

Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
           GEGQLGLG+R++ V +P  IP LE +         +R+G+   + K   SY+  IACGGR
Sbjct: 236 GEGQLGLGTRMRTVSSPQPIP-LEPST------YWLRKGNRAGAVKPPGSYIVGIACGGR 288

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HSA++TD GA+LTFGWGLYGQCG GST D+L P+Y SSL  + V  IA+GLWHT+CI+  
Sbjct: 289 HSAILTDGGAVLTFGWGLYGQCGQGSTEDELSPNYVSSLGGLHVTAIASGLWHTLCITDT 348

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G VY FGGNQFGQLG G D +E +PKL+E  +LE + AK VSCGARHSA+ TE G+V  W
Sbjct: 349 GEVYAFGGNQFGQLGVGGDHSETLPKLVEAAVLEDECAKSVSCGARHSAITTEKGKVFCW 408

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           GWNKYGQLGLGD+ DR+ P  VP+      N+ACGWWHTL L +
Sbjct: 409 GWNKYGQLGLGDTGDRDTPHEVPLE-HRAVNVACGWWHTLALTD 451



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 47/275 (17%)

Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG-----KDRP 272
           AAG  H  ++++ G+V+ WG+            + VP+     C+E   SG     + R 
Sbjct: 99  AAGWAHCAVVTETGEVYTWGWK-----------ECVPSDK--NCVEQGVSGDPYDYQGRT 145

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
             ++    +     G S    +    +      +AG+  + G G+         ++ +  
Sbjct: 146 EELKHVEPDLDSSPGHSPEALLDSSKKRKVSTDEAGSPDSSGAGV---------DEAVVA 196

Query: 333 SYASSLMDIQVEQIAAGLWHTVC---ISVEGRVYVFGGNQFGQLGTG-----VDQAENVP 384
                 M  +V  +A G  HT     I   G+V+ +G    GQLG G     V   + +P
Sbjct: 197 PLCCVPMPAKVILVATGGRHTFVLFRILDTGQVWSWGYGGEGQLGLGTRMRTVSSPQPIP 256

Query: 385 KLLETPIL-ESKRAKVV----------SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
               T  L +  RA  V          +CG RHSA+LT+ G VL++GW  YGQ G G + 
Sbjct: 257 LEPSTYWLRKGNRAGAVKPPGSYIVGIACGGRHSAILTDGGAVLTFGWGLYGQCGQGSTE 316

Query: 434 DRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           D   P+ V  + G     IA G WHTL + +T ++
Sbjct: 317 DELSPNYVSSLGGLHVTAIASGLWHTLCITDTGEV 351


>gi|302793045|ref|XP_002978288.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
 gi|300154309|gb|EFJ20945.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
          Length = 454

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/462 (52%), Positives = 301/462 (65%), Gaps = 22/462 (4%)

Query: 13  KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGK 71
           +++  ++  V MWGYLP +SP++SPI+ P         D W+ VC GGCGFALA SESGK
Sbjct: 2   EIQGTRKLGVRMWGYLPASSPQRSPIVVPTKVSPASPDDGWRAVCSGGCGFALALSESGK 61

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           L TWGS DD GQ Y  SGKH E PEPFPL T  ++  AAAGWAHC  VTE GEVYTWGW+
Sbjct: 62  LHTWGSTDDLGQCYHISGKHQEHPEPFPLQTPPAIF-AAAGWAHCAVVTETGEVYTWGWK 120

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALP-----TEQAPPSDKRAGEEVVKRRKTSSAR 186
           ECVPS K   + G +G    D  G+   L       + +P     A  +  K+RK S+  
Sbjct: 121 ECVPSDKNCVEQGVSGD-PYDYQGRTEELKHVEPDLDSSPGHSPEARLDSSKKRKVSTDE 179

Query: 187 EES-ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS----DMGQVWGWGYGGE 241
             S ++P +G +   ++P      P  K+  VA GGRHTL L+      GQVW WGYGGE
Sbjct: 180 AGSPDSPGAGVDEAVVAPLCCVPMP-AKVILVATGGRHTLALTGKFFHTGQVWSWGYGGE 238

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           GQLGLG+R++ V +P  IP LE +         +R+G+   + K   SY+  IACGGRHS
Sbjct: 239 GQLGLGTRMRTVSSPQPIP-LEPST------YWLRKGNRAGAVKPPGSYIVGIACGGRHS 291

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           A++TD GA+LTFGWGLYGQCG GST D+L P+Y SSL  + V  IA+GLWHT+CI+  G 
Sbjct: 292 AILTDGGAVLTFGWGLYGQCGQGSTEDELSPNYVSSLGGLHVTAIASGLWHTLCITDTGE 351

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           VY FGGNQFGQLG G D +E +PKL+E  +LE + AK VSCGARHSA+ TE G+V  WGW
Sbjct: 352 VYAFGGNQFGQLGVGGDHSETLPKLVEAAVLEDECAKSVSCGARHSAITTEKGKVFCWGW 411

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           NKYGQLGLGD+ DR+ P  VP+      N+ACGWWHTL L +
Sbjct: 412 NKYGQLGLGDTGDRDTPHEVPLE-HRAVNVACGWWHTLALTD 452



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 48/276 (17%)

Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG-----KDRP 272
           AAG  H  ++++ G+V+ WG+            + VP+     C+E   SG     + R 
Sbjct: 99  AAGWAHCAVVTETGEVYTWGWK-----------ECVPSDK--NCVEQGVSGDPYDYQGRT 145

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
             ++    +     G S    +    +      +AG+  + G G+         ++ +  
Sbjct: 146 EELKHVEPDLDSSPGHSPEARLDSSKKRKVSTDEAGSPDSPGAGV---------DEAVVA 196

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVE----GRVYVFGGNQFGQLGTG-----VDQAENV 383
                 M  +V  +A G  HT+ ++ +    G+V+ +G    GQLG G     V   + +
Sbjct: 197 PLCCVPMPAKVILVATGGRHTLALTGKFFHTGQVWSWGYGGEGQLGLGTRMRTVSSPQPI 256

Query: 384 PKLLETPIL-ESKRAKVV----------SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           P    T  L +  RA  V          +CG RHSA+LT+ G VL++GW  YGQ G G +
Sbjct: 257 PLEPSTYWLRKGNRAGAVKPPGSYIVGIACGGRHSAILTDGGAVLTFGWGLYGQCGQGST 316

Query: 433 IDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            D   P+ V  + G     IA G WHTL + +T ++
Sbjct: 317 EDELSPNYVSSLGGLHVTAIASGLWHTLCITDTGEV 352


>gi|168002036|ref|XP_001753720.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695127|gb|EDQ81472.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 478

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/468 (51%), Positives = 297/468 (63%), Gaps = 42/468 (8%)

Query: 22  VYMWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGKLITWGSADD 80
           V MWGYLP  SP+++P+L P P       D  K VC GGCGF +A SESGKL TWGS  +
Sbjct: 17  VRMWGYLPAASPQRAPLLQPTPVPSTPLNDPLKMVCNGGCGFGIAISESGKLNTWGSTTE 76

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
            GQ YL SGK  E PEP+ LPTE+ +++AA GWAHC +VT  GEVYTWGW ECVP+ K  
Sbjct: 77  LGQCYLISGKQQEVPEPYSLPTESPIIQAAGGWAHCAAVTGDGEVYTWGWSECVPNIKSN 136

Query: 141 RDFGSAGSFQKDST---GKQSALPTEQ------APPSDKRAGEEVVKRRKTSS--AREES 189
            D       Q D T   G  ++L   Q         S+ +  EEV+K+RK  S   R   
Sbjct: 137 PD--ETEQAQGDDTSPSGPNTSLHGRQNHRNLTCKTSESKGAEEVLKKRKVVSFEDRGSP 194

Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM----------------GQV 233
           E+P + +E     PCLV L+PG++I+ VAAGGRHTL LS M                  V
Sbjct: 195 ESPTAAEENVFAPPCLVILDPGIRISTVAAGGRHTLALSGMYSFSYDLIFPHFGNIYSHV 254

Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
           +GWGYGGEGQLGLGSR ++V TP  +PC     +G      V  G  +  G    S V  
Sbjct: 255 YGWGYGGEGQLGLGSRTRIVSTPQRVPCFSSLENG------VTIGEASIPG----SCVTR 304

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ-CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           IACGGRHSAV+TDAGALLTFGWGLYGQ  G GST D+L P   S++  ++V  IAAGLWH
Sbjct: 305 IACGGRHSAVITDAGALLTFGWGLYGQQVGQGSTEDELSPCLVSAMRGLRVVGIAAGLWH 364

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           T+CI+  G VY FGGNQFGQLG G + AE  P+L++ P+LE + +  V+CGARHS VLT 
Sbjct: 365 TLCITDIGDVYAFGGNQFGQLGVGGNTAETSPRLVDAPLLEDETSVAVACGARHSVVLTG 424

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTL 459
            G++ +WGWNKYGQLGLGDS +R++P  V ++ G    +IACGWWHTL
Sbjct: 425 SGKIFAWGWNKYGQLGLGDSNNRDLPVQVTMNDGGRAASIACGWWHTL 472



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 31/158 (19%)

Query: 341 IQVEQIAAGLWHTVCIS----------------VEGRVYVFGGNQFGQLGTG-----VDQ 379
           I++  +AAG  HT+ +S                +   VY +G    GQLG G     V  
Sbjct: 217 IRISTVAAGGRHTLALSGMYSFSYDLIFPHFGNIYSHVYGWGYGGEGQLGLGSRTRIVST 276

Query: 380 AENVPKL--LETPI------LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ-LGLG 430
            + VP    LE  +      +       ++CG RHSAV+T+ G +L++GW  YGQ +G G
Sbjct: 277 PQRVPCFSSLENGVTIGEASIPGSCVTRIACGGRHSAVITDAGALLTFGWGLYGQQVGQG 336

Query: 431 DSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            + D   P LV  + G     IA G WHTL + +   +
Sbjct: 337 STEDELSPCLVSAMRGLRVVGIAAGLWHTLCITDIGDV 374


>gi|168037867|ref|XP_001771424.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677342|gb|EDQ63814.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 465

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/461 (50%), Positives = 293/461 (63%), Gaps = 30/461 (6%)

Query: 24  MWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
           MWGYLP  SP+++P+L P    +    D  K VC GGCGF +  SESGKL TWGS  + G
Sbjct: 1   MWGYLPAASPQRTPLLHPTLVPITALDDPLKIVCNGGCGFGIGISESGKLNTWGSTTELG 60

Query: 83  QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
           Q YL SGK  E PEP+ LPT++ +++AA GWAHC +VT  GEVYTWGW ECVPS  +   
Sbjct: 61  QCYLISGKQQEVPEPYLLPTDSPIIQAAGGWAHCAAVTGNGEVYTWGWSECVPSVTLNAV 120

Query: 143 FGS-------------AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE-- 187
             S               S Q  S    +A  +E  P S     EEV+K+RK  S  +  
Sbjct: 121 EESEQVQEDDIPPDVPGTSLQLLSRNNVNAARSEPLPSS---VVEEVLKKRKVVSFEDGG 177

Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
             E+P + DE     P LV L+ G++I  VAAGGRHTL LSD+G VW WGYGG+GQLGLG
Sbjct: 178 SPESPTAADENVFSPPFLVNLDAGIRIASVAAGGRHTLALSDVGHVWAWGYGGDGQLGLG 237

Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
           SR+++V +P  IPCL            V +  V   GK     +K IACGGRHSAVVTDA
Sbjct: 238 SRMRIVSSPQQIPCLNLTEKA------VARSGVPIPGKC----IKAIACGGRHSAVVTDA 287

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           GALLTFGWGL+GQ G GST D+L P   S++  +++  IAAGLWHT+CI+  G VY FGG
Sbjct: 288 GALLTFGWGLHGQVGQGSTEDELSPCCVSTIGGLRIVGIAAGLWHTLCITDVGDVYAFGG 347

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           NQFGQLG G + AE  P++++ P+LE +    V+CGARHSAVLT  G++ +WGWNKYGQL
Sbjct: 348 NQFGQLGVGGNAAELSPRMIDAPLLEDESCVEVACGARHSAVLTGSGKIFAWGWNKYGQL 407

Query: 428 GLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAETTQI 467
           GLGD  +R++P  V ++ G    +IACGWWHTL     T +
Sbjct: 408 GLGDCNNRDLPVQVTMNDGGRAASIACGWWHTLASVHMTPL 448


>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 260

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/265 (67%), Positives = 218/265 (82%), Gaps = 11/265 (4%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           PCLVTLNPGVKIT VAAGGRHTL+LSD+GQVWGWGYGGEGQLGLGSR++MV +PH+IPC+
Sbjct: 2   PCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCI 61

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
           + ++        + QGS++S G   R   S +K IACGGRHSAV+TDAGA+L FGWGLYG
Sbjct: 62  DSSS--------LVQGSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYG 113

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           QCG GST+D+L P+  SSL+ IQ+E +AAGLWHTVC S +G VY FGGNQFGQLGTG DQ
Sbjct: 114 QCGQGSTDDELSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQ 173

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           AE +P+LL+ P LE+   K +SCGARH+A++T++G+V SWGWNKYGQLGLGD IDRNIPS
Sbjct: 174 AETLPRLLDCPSLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPS 233

Query: 440 LVPIHGFLPRNIACGWWHTLLLAET 464
            V I G + +N+ACGWWHTLLLAE+
Sbjct: 234 EVAIEGCIAKNVACGWWHTLLLAES 258



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 26/158 (16%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLI 259
           LSP  V+   G++I  VAAG  HT+  S  G V+ +G    GQLG GS + + +P     
Sbjct: 124 LSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDC 183

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
           P LE+               VN         VK I+CG RH+A+VTD G + ++GW  YG
Sbjct: 184 PSLEN---------------VN---------VKTISCGARHTALVTDNGKVFSWGWNKYG 219

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           Q G G   D+  PS   ++     + +A G WHT+ ++
Sbjct: 220 QLGLGDVIDRNIPSEV-AIEGCIAKNVACGWWHTLLLA 256


>gi|357460953|ref|XP_003600758.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489806|gb|AES71009.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 334

 Score =  357 bits (916), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 185/327 (56%), Positives = 228/327 (69%), Gaps = 43/327 (13%)

Query: 16  ECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKL 72
           E KE +VYMWGYLPG  P+++P+L+P+  R+    GG +WKDV GGGCGFA+A SESGKL
Sbjct: 7   EVKEKMVYMWGYLPGALPQRTPLLTPVLVRVPATSGGYNWKDVSGGGCGFAMAISESGKL 66

Query: 73  ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
           ITWGS DD GQSY+TSGKHGETPEPF LP E S+VKAA+ WAHCV+ T+ GEVYTWGW+E
Sbjct: 67  ITWGSTDDLGQSYVTSGKHGETPEPFSLPNEVSIVKAASAWAHCVAATDCGEVYTWGWKE 126

Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP------------PSD----------- 169
           C+PS KV  +     S +KD+ GK S+  TEQ              PSD           
Sbjct: 127 CIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQGMSNLFSMDICLQIPSDFATVSSRSQVS 186

Query: 170 ------KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
                   +GEE  KRRK SSA++ ++  +SGD+  T  PCLVTLNPGVKIT VAAGGRH
Sbjct: 187 KSTGGTVSSGEESSKRRKVSSAKQAAQTSSSGDDILTAMPCLVTLNPGVKITSVAAGGRH 246

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           TL+LSD+GQVWGWGYGGEGQLGLGSR++MV +PH+IPC++ ++        + QGS++S 
Sbjct: 247 TLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSS--------LVQGSMSSE 298

Query: 284 GKAGR---SYVKEIACGGRHSAVVTDA 307
           G   R   S +K IACGGRHSAV+T A
Sbjct: 299 GHNFRIPGSCIKAIACGGRHSAVITGA 325



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 21/83 (25%)

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVP---------------- 442
           V+ G RH+ VL++ GQV  WG+   GQLGLG  +   + P ++P                
Sbjct: 240 VAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQGSMSSEG 299

Query: 443 ----IHGFLPRNIACGWWHTLLL 461
               I G   + IACG  H+ ++
Sbjct: 300 HNFRIPGSCIKAIACGGRHSAVI 322


>gi|224098477|ref|XP_002311187.1| predicted protein [Populus trichocarpa]
 gi|222851007|gb|EEE88554.1| predicted protein [Populus trichocarpa]
          Length = 253

 Score =  271 bits (692), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 142/244 (58%), Positives = 171/244 (70%), Gaps = 19/244 (7%)

Query: 3   MNGSKREENE-KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG 61
           MNG ++EE    M+   E +VYMWGYLPG  P++SPILSP+  R     +WKDVCGGGCG
Sbjct: 1   MNGERKEEGVVNMDVHNEKLVYMWGYLPGALPQRSPILSPLAVRSTV-YAWKDVCGGGCG 59

Query: 62  FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
           FA+A SESGKLITWGS DD GQSY+TSGKHGETPE FPLPTEAS+VKAAAGWAHCV+ T 
Sbjct: 60  FAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEAFPLPTEASIVKAAAGWAHCVAATG 119

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------------- 167
            GEVYTWGW+EC+PS KV  D   AG  +KD   +Q+   TEQ  P              
Sbjct: 120 NGEVYTWGWKECIPSGKVFSDPSGAGGMEKDVFERQNLFFTEQGSPRSQGPRSSGGSGTL 179

Query: 168 --SDKR-AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
              D R + +E  KRR+ SSA++ +E+ ++GDE  +  PCLVTLNPGV+I  V+AGGRHT
Sbjct: 180 SGLDGRGSKDESTKRRRISSAKQAAESSSTGDETPSAFPCLVTLNPGVRIVTVSAGGRHT 239

Query: 225 LILS 228
           L LS
Sbjct: 240 LTLS 243


>gi|297597956|ref|NP_001044792.2| Os01g0846800 [Oryza sativa Japonica Group]
 gi|56784032|dbj|BAD82660.1| UVB-resistance protein UVR8-like [Oryza sativa Japonica Group]
 gi|56784705|dbj|BAD81831.1| UVB-resistance protein UVR8-like [Oryza sativa Japonica Group]
 gi|255673871|dbj|BAF06706.2| Os01g0846800 [Oryza sativa Japonica Group]
          Length = 180

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 119/174 (68%), Positives = 147/174 (84%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           VK IACGGRHSAVVTD+GALLTFGWGLYGQCG G+T+D L P+  SS++ ++++ I AGL
Sbjct: 5   VKAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGVKMQDIGAGL 64

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           WHTVC SV+G VY FGGNQFGQLGTG DQAE VPKL++   LE+K A+ VSCGARHSA++
Sbjct: 65  WHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASSLENKNARAVSCGARHSAII 124

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           T++G+V  WGWNKYGQLGLGDS+DRN+P  VP+  + P N++CGWWHTL+LAE+
Sbjct: 125 TDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNVSCGWWHTLVLAES 178



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 24/163 (14%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+    LSP  V+   GVK+  + AG  HT+  S  G V+ +G    GQLG GS      
Sbjct: 38  GNTDDVLSPTCVSSILGVKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSD----- 92

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
               +P L  A+S +++                    + ++CG RHSA++TD G +  +G
Sbjct: 93  QAETVPKLVDASSLENKN------------------ARAVSCGARHSAIITDEGEVFCWG 134

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           W  YGQ G G + D+  P  +  +       ++ G WHT+ ++
Sbjct: 135 WNKYGQLGLGDSMDRNVPC-SVPVDAYHPLNVSCGWWHTLVLA 176


>gi|326499730|dbj|BAJ86176.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 165

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 101/162 (62%), Positives = 135/162 (83%)

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           +  D+GALL FGWGLYGQCG G+T+D L P+  S+++ ++++ +AAGLWHTV IS +G V
Sbjct: 2   LFADSGALLAFGWGLYGQCGQGNTDDVLSPTCVSAILGVKMQDVAAGLWHTVSISADGDV 61

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           Y FGGNQFGQLG G DQAE +PKL++ P L++K A+ VSCGARHSA++T++G+V  WGWN
Sbjct: 62  YSFGGNQFGQLGIGSDQAETIPKLVDAPSLKNKNARSVSCGARHSAIITDEGEVFCWGWN 121

Query: 423 KYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           KYGQLGLGDS+DRN+P +VP+ G+ P N++CGWWHTL+LAE+
Sbjct: 122 KYGQLGLGDSMDRNVPCIVPVDGYHPLNVSCGWWHTLVLAES 163



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 24/158 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            LSP  V+   GVK+  VAAG  HT+ +S  G V+ +G    GQLG+GS          I
Sbjct: 28  VLSPTCVSAILGVKMQDVAAGLWHTVSISADGDVYSFGGNQFGQLGIGSD-----QAETI 82

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
           P L  A S K++                    + ++CG RHSA++TD G +  +GW  YG
Sbjct: 83  PKLVDAPSLKNKN------------------ARSVSCGARHSAIITDEGEVFCWGWNKYG 124

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           Q G G + D+  P     +       ++ G WHT+ ++
Sbjct: 125 QLGLGDSMDRNVPCIV-PVDGYHPLNVSCGWWHTLVLA 161


>gi|224112701|ref|XP_002316265.1| predicted protein [Populus trichocarpa]
 gi|222865305|gb|EEF02436.1| predicted protein [Populus trichocarpa]
          Length = 202

 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 117/203 (57%), Positives = 143/203 (70%), Gaps = 18/203 (8%)

Query: 24  MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ 83
           MWGYLPG  P++SPI SP+  R     +WKDVCGGGCGFA+A SESGKLITWGS DD GQ
Sbjct: 1   MWGYLPGALPQRSPISSPLAVRSTV-YAWKDVCGGGCGFAMAISESGKLITWGSTDDLGQ 59

Query: 84  SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
           SY+TSGKHGETPE FPLPTEAS+V+AAAGWAHCV+ T+ GEVYTWGW+EC+PS KV  D 
Sbjct: 60  SYVTSGKHGETPEAFPLPTEASIVEAAAGWAHCVAATDTGEVYTWGWKECIPSGKVFGDP 119

Query: 144 GSAGSFQKDSTGKQSALPTEQAPPS----------------DKR-AGEEVVKRRKTSSAR 186
             AG   KD+  +Q+   TEQ  P                 D R +G+E  KRR+ +SA+
Sbjct: 120 SGAGGSAKDAFERQNLFFTEQVSPRSQGSRSSSGSGTFSGVDGRGSGDESTKRRRIASAK 179

Query: 187 EESENPASGDEFFTLSPCLVTLN 209
           + +E+ ++GDE  +  PCLVTLN
Sbjct: 180 QAAESSSAGDETLSALPCLVTLN 202


>gi|224112699|ref|XP_002316264.1| predicted protein [Populus trichocarpa]
 gi|222865304|gb|EEF02435.1| predicted protein [Populus trichocarpa]
          Length = 164

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 109/158 (68%), Positives = 134/158 (84%), Gaps = 4/158 (2%)

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           +SD+GQVWGWGYGGEGQLGLGSRI+MV +PH IPC++ +A GKDR +++ +G + S G++
Sbjct: 8   VSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCID-SAYGKDRAVVLSRGGMTSEGQS 66

Query: 287 GR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
            R   S+VK IACGGRHSAV+TDAGALLTFGWGLYGQCG GST+D+L P+  SSL+ I++
Sbjct: 67  FRVPGSHVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRI 126

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           E +AAGLWHTVC+S +G VY FGGNQFGQLGTG DQAE
Sbjct: 127 EAVAAGLWHTVCVSADGDVYSFGGNQFGQLGTGGDQAE 164



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIAC 453
              K ++CG RHSAV+T+ G +L++GW  YGQ G G + D   P+ V  + G     +A 
Sbjct: 72  SHVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEAVAA 131

Query: 454 GWWHTLLLAETTQI 467
           G WHT+ ++    +
Sbjct: 132 GLWHTVCVSADGDV 145


>gi|224098479|ref|XP_002311188.1| predicted protein [Populus trichocarpa]
 gi|222851008|gb|EEE88555.1| predicted protein [Populus trichocarpa]
          Length = 148

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 98/145 (67%), Positives = 121/145 (83%)

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           +CG GST+D+L P+  SSL+ I++E +AAGLWHTVC+S +G VY FGGNQFGQLGTG DQ
Sbjct: 2   KCGQGSTDDELSPTCVSSLLGIRIEGVAAGLWHTVCVSADGDVYTFGGNQFGQLGTGGDQ 61

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           AE +P+LLE P LE+  AK +SCGARHS +++EDG+V  WGWNKYGQLGLGD IDRN+PS
Sbjct: 62  AETLPRLLEAPSLENIHAKTISCGARHSTIISEDGKVFCWGWNKYGQLGLGDVIDRNVPS 121

Query: 440 LVPIHGFLPRNIACGWWHTLLLAET 464
            V I G +P+N+ACGWWHTLLLAE+
Sbjct: 122 QVTIDGCVPKNVACGWWHTLLLAES 146



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 28/159 (17%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLI 259
           LSP  V+   G++I  VAAG  HT+ +S  G V+ +G    GQLG G  + + +P     
Sbjct: 12  LSPTCVSSLLGIRIEGVAAGLWHTVCVSADGDVYTFGGNQFGQLGTGGDQAETLPRLLEA 71

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
           P LE+                         + K I+CG RHS ++++ G +  +GW  YG
Sbjct: 72  PSLENI------------------------HAKTISCGARHSTIISEDGKVFCWGWNKYG 107

Query: 320 QCGHGSTNDQLRPSYASSLMDIQV-EQIAAGLWHTVCIS 357
           Q G G   D+  PS  +  +D  V + +A G WHT+ ++
Sbjct: 108 QLGLGDVIDRNVPSQVT--IDGCVPKNVACGWWHTLLLA 144


>gi|226505376|ref|NP_001142009.1| uncharacterized protein LOC100274159 [Zea mays]
 gi|194706770|gb|ACF87469.1| unknown [Zea mays]
          Length = 124

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 102/122 (83%)

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
           ++ +AAGLWHTVC SV+G VY FGGNQFGQLGTG DQAE VPKL++   LE+K A+ VSC
Sbjct: 1   MQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDATSLENKNARSVSC 60

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           GARHSA++T++G+V  WGWNKYGQLGLGDS+DRN+P  VP+  + P N++CGW HTL+LA
Sbjct: 61  GARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNVSCGWRHTLVLA 120

Query: 463 ET 464
           ++
Sbjct: 121 DS 122



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 5/124 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY--ASSLMDIQVEQIAA 348
           ++++A G  H+   +  G + +FG   +GQ G GS   +  P    A+SL +     ++ 
Sbjct: 1   MQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDATSLENKNARSVSC 60

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G  H+  I+ EG V+ +G N++GQLG G     NVP     P+ ++     VSCG RH+ 
Sbjct: 61  GARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP--CSVPV-DAYHPLNVSCGWRHTL 117

Query: 409 VLTE 412
           VL +
Sbjct: 118 VLAD 121



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 23/119 (19%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           +  VAAG  HT+  S  G V+ +G    GQLG GS          +P L  A S +++  
Sbjct: 1   MQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSD-----QAETVPKLVDATSLENKN- 54

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                             + ++CG RHSA++TD G +  +GW  YGQ G G + D+  P
Sbjct: 55  -----------------ARSVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP 96


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 191/402 (47%), Gaps = 61/402 (15%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
           +   G   ++A      + +WG  +D GQ       HG+  E  P PT+ S      +V 
Sbjct: 8   IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 60

Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
              G  H V+ +++G EVY+WGW           DFG  G    +S+   + LP +    
Sbjct: 61  VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 108

Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
               Q    D       ++    S  R ++     GD   +L P  +    G++I  VAA
Sbjct: 109 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 168

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G  HT  +++ G ++GWG+G  G LGLG R     T  L+P                   
Sbjct: 169 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP-----------------ER 206

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
           V S+G    S V   ACG RH+  V+ +GAL T+GW  YGQ GHG   D L P    +L 
Sbjct: 207 VTSTGGEKMSMV---ACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 263

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           +  + QI+ G  HT+ ++ +G++Y +G N+FGQ+G G +  +  P  +  P  + ++   
Sbjct: 264 NSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP--DDQKVVQ 321

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           VSCG RH+  +TE   V +WG    GQLG+G+S+DRN P ++
Sbjct: 322 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 363



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 131/252 (51%), Gaps = 29/252 (11%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  K+  ++AG  H++ L     V  WG G +GQLG G                     +
Sbjct: 2   PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-------------------AE 42

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
           DRP   +  +++         +  + CG  H+   + +G  + ++GWG +G+ GHG+++D
Sbjct: 43  DRPSPTQLSALDGH------QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD 96

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +L  I+++QIA G  H + +++EG V  +G NQ GQLG G  +   VP+ ++
Sbjct: 97  LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 156

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
               E  R K+V+ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V   G   
Sbjct: 157 A--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 214

Query: 449 RN-IACGWWHTL 459
            + +ACGW HT+
Sbjct: 215 MSMVACGWRHTI 226


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 191/402 (47%), Gaps = 61/402 (15%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
           +   G   ++A      + +WG  +D GQ       HG+  E  P PT+ S      +V 
Sbjct: 20  IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 72

Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
              G  H V+ +++G EVY+WGW           DFG  G    +S+   + LP +    
Sbjct: 73  VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 120

Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
               Q    D       ++    S  R ++     GD   +L P  +    G++I  VAA
Sbjct: 121 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 180

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G  HT  +++ G ++GWG+G  G LGLG R     T  L+P                   
Sbjct: 181 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP-----------------ER 218

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
           V S+G    S V   ACG RH+  V+ +GAL T+GW  YGQ GHG   D L P    +L 
Sbjct: 219 VTSTGGEKMSMV---ACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 275

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           +  + QI+ G  HT+ ++ +G++Y +G N+FGQ+G G +  +  P  +  P  + ++   
Sbjct: 276 NSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP--DDQKVVQ 333

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           VSCG RH+  +TE   V +WG    GQLG+G+S+DRN P ++
Sbjct: 334 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 375



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 131/252 (51%), Gaps = 29/252 (11%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  K+  ++AG  H++ L     V  WG G +GQLG G                     +
Sbjct: 14  PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-------------------AE 54

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
           DRP   +  +++         +  + CG  H+   + +G  + ++GWG +G+ GHG+++D
Sbjct: 55  DRPSPTQLSALDGH------QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD 108

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +L  I+++QIA G  H + +++EG V  +G NQ GQLG G  +   VP+ ++
Sbjct: 109 LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 168

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
               E  R K+V+ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V   G   
Sbjct: 169 A--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 226

Query: 449 RN-IACGWWHTL 459
            + +ACGW HT+
Sbjct: 227 MSMVACGWRHTI 238


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 191/402 (47%), Gaps = 61/402 (15%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
           +   G   ++A      + +WG  +D GQ       HG+  E  P PT+ S      +V 
Sbjct: 19  IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71

Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
              G  H V+ +++G EVY+WGW           DFG  G    +S+   + LP +    
Sbjct: 72  VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119

Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
               Q    D       ++    S  R ++     GD   +L P  +    G++I  VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 179

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G  HT  +++ G ++GWG+G  G LGLG R     T  L+P                   
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP-----------------ER 217

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
           V S+G    S V   ACG RH+  V+ +GAL T+GW  YGQ GHG   D L P    +L 
Sbjct: 218 VTSTGGEKMSMV---ACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 274

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           +  + QI+ G  HT+ ++ +G++Y +G N+FGQ+G G +  +  P  +  P  + ++   
Sbjct: 275 NSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP--DDQKVVQ 332

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           VSCG RH+  +TE   V +WG    GQLG+G+S+DRN P ++
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 131/252 (51%), Gaps = 29/252 (11%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  K+  ++AG  H++ L     V  WG G +GQLG G                     +
Sbjct: 13  PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-------------------AE 53

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
           DRP   +  +++         +  + CG  H+   + +G  + ++GWG +G+ GHG+++D
Sbjct: 54  DRPSPTQLSALDGH------QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD 107

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +L  I+++QIA G  H + +++EG V  +G NQ GQLG G  +   VP+ ++
Sbjct: 108 LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 167

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
               E  R K+V+ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V   G   
Sbjct: 168 A--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 225

Query: 449 RN-IACGWWHTL 459
            + +ACGW HT+
Sbjct: 226 MSMVACGWRHTI 237


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 193/402 (48%), Gaps = 61/402 (15%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
           +   G   ++A      + +WG  +D GQ       HG+  E  P PT+ S      +V 
Sbjct: 8   IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 60

Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
              G  H V+ +++G EVY+WGW           DFG  G    +S+   + LP +    
Sbjct: 61  VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 108

Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
               Q    D       ++    S  R ++     GD   +L P  +    G++I  VAA
Sbjct: 109 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 168

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G  HT  +++ G ++GWG+G  G LGLG R     T  L+P         +R        
Sbjct: 169 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP---------ER-------- 206

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
           V S+G    S V   ACG RH+  V+ +GAL T+GW  YGQ GHG   D L P    +L 
Sbjct: 207 VTSTGGEKMSMV---ACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 263

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           +  + QI+ G  HT+ ++ +G++Y +G N+FGQ+G G +  +  P  +  P  + ++   
Sbjct: 264 NSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP--DDQKVVQ 321

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           VSCG RH+  +TE   V +WG    GQLG+G+S+DRN P ++
Sbjct: 322 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 363



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 131/252 (51%), Gaps = 29/252 (11%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  K+  ++AG  H++ L     V  WG G +GQLG G                     +
Sbjct: 2   PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-------------------AE 42

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
           DRP   +  +++         +  + CG  H+   + +G  + ++GWG +G+ GHG+++D
Sbjct: 43  DRPSPTQLSALDGH------QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD 96

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +L  I+++QIA G  H + +++EG V  +G NQ GQLG G  +   VP+ ++
Sbjct: 97  LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 156

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
               E  R K+V+ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V   G   
Sbjct: 157 A--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 214

Query: 449 RN-IACGWWHTL 459
            + +ACGW HT+
Sbjct: 215 MSMVACGWRHTI 226


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 190/402 (47%), Gaps = 61/402 (15%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
           +   G   ++A      + +WG  +D GQ       HG+  E  P PT+ S      +V 
Sbjct: 19  IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71

Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
              G  H V+ +++G EVY+WGW           DFG  G    +S+   + LP +    
Sbjct: 72  VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119

Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
               Q    D       ++    S  R ++     GD   +L P  +    G++I  VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 179

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G  HT  +++ G ++GWG+G  G LGLG R        L+P    +A G+   +      
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----NDRLVPERVTSAGGEKMSM------ 228

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                         +ACG RH+  V+ +GAL T+GW  YGQ GHG   D L P    +L 
Sbjct: 229 --------------VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 274

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           +  + QI+ G  HT+ ++ +G++Y +G N+FGQ+G G +  +  P  +  P  + ++   
Sbjct: 275 NSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP--DDQKVVQ 332

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           VSCG RH+  +TE   V +WG    GQLG+G+S+DRN P ++
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 130/252 (51%), Gaps = 29/252 (11%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P   +  ++AG  H++ L     V  WG G +GQLG G                     +
Sbjct: 13  PPRTVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-------------------AE 53

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
           DRP   +  +++         +  + CG  H+   + +G  + ++GWG +G+ GHG+++D
Sbjct: 54  DRPSPTQLSALDGH------QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD 107

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +L  I+++QIA G  H + +++EG V  +G NQ GQLG G  +   VP+ ++
Sbjct: 108 LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 167

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
               E  R K+V+ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V   G   
Sbjct: 168 A--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEK 225

Query: 449 RN-IACGWWHTL 459
            + +ACGW HT+
Sbjct: 226 MSMVACGWRHTI 237


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 190/402 (47%), Gaps = 61/402 (15%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
           +   G   ++A      + +WG  +D GQ       HG+  E  P PT+ S      +V 
Sbjct: 19  IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71

Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
              G  H V+ +++G EVY+WGW           DFG  G    +S+   + LP +    
Sbjct: 72  VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119

Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
               Q    D       ++    S  R ++     GD   +L P  +    G+ I  VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAA 179

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G  HT  +++ G ++GWG+G  G LGLG R     T  L+P                   
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP-----------------ER 217

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
           V S+G    S V   ACG RH+  V+ +GAL T+GW  YGQ GHG   D L P    +L 
Sbjct: 218 VTSTGGEKMSMV---ACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 274

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           +  + QI+ G  HT+ ++ +G++Y +G N+FGQ+G G +  +  P  +  P  + ++   
Sbjct: 275 NSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP--DDQKVVQ 332

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           VSCG RH+  +TE   V +WG    GQLG+G+S+DRN P ++
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 130/252 (51%), Gaps = 29/252 (11%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  K+  ++AG  H++ L     V  WG G +GQLG G                     +
Sbjct: 13  PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-------------------AE 53

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
           DRP   +  +++         +  + CG  H+   + +G  + ++GWG +G+ GHG+++D
Sbjct: 54  DRPSPTQLSALDGH------QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD 107

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +L  I+++QIA G  H + +++EG V  +G NQ GQLG G  +   VP+ ++
Sbjct: 108 LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 167

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
               E    K+V+ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V   G   
Sbjct: 168 A--FEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 225

Query: 449 RN-IACGWWHTL 459
            + +ACGW HT+
Sbjct: 226 MSMVACGWRHTI 237


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 190/412 (46%), Gaps = 56/412 (13%)

Query: 39  LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
           ++P P R+        +   G   ++A      + +WG  +D GQ      +   +P   
Sbjct: 10  VTPPPRRVL-------IISAGASHSVALLSGDIVCSWGRGED-GQLGHGDAEDRLSPTQL 61

Query: 99  PLPTEASVVKAAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
               +  +V    G  H V+ +E+  EVY+WGW           DFG  G    +S+   
Sbjct: 62  SALDDHQIVSVTCGADHTVAYSESRMEVYSWGWG----------DFGRLG--HGNSSDLF 109

Query: 158 SALPTE--------QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
           + LP +        Q    D       ++    S  R ++     GD   +L P  +   
Sbjct: 110 TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF 169

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
            G++I  VAAG  HT  +++ G ++GWG+G  G LGLG R        L+P    +A G+
Sbjct: 170 EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----NDRLVPERVTSAGGE 224

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
              +                    +ACG RH+  V+ +GAL T+GW  YGQ GHG   D 
Sbjct: 225 KMSM--------------------VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDH 264

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           L P    +L +  + QI+ G  HT+ ++ +G++Y +G N+FGQ+G G +  +  P  +  
Sbjct: 265 LVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRI 324

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           P  + ++   VSCG RH+  +TE   V +WG    GQLG+G+S+DRN P ++
Sbjct: 325 P--DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKII 374



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 127/252 (50%), Gaps = 29/252 (11%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  ++  ++AG  H++ L     V  WG G +GQLG G     +    L    +H     
Sbjct: 13  PPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQ---- 68

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
                                +  + CG  H+   +++   + ++GWG +G+ GHG+++D
Sbjct: 69  ---------------------IVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSD 107

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +L  I+++QIA G  H + +++EG V  +G NQ GQLG G  +   VP+ ++
Sbjct: 108 LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 167

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
               E  R K+V+ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V   G   
Sbjct: 168 A--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEK 225

Query: 449 RN-IACGWWHTL 459
            + +ACGW HT+
Sbjct: 226 MSMVACGWRHTI 237



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIAC 453
           +R  ++S GA HS  L     V SWG  + GQLG GD+ DR  P+ L  +      ++ C
Sbjct: 15  RRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTC 74

Query: 454 GWWHTLLLAET 464
           G  HT+  +E+
Sbjct: 75  GADHTVAYSES 85


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 189/402 (47%), Gaps = 61/402 (15%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
           +   G   ++A      + +WG  +D GQ       HG+  E  P PT+ S      +V 
Sbjct: 10  IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 62

Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
              G  H V+ +++G EVY+WGW           DFG  G    +S+   + LP +    
Sbjct: 63  VTCGADHTVAYSQSGXEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 110

Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
               Q    D        +    S  R ++     GD   +L P  +    G++I  VAA
Sbjct: 111 IRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAA 170

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G  HT  +++ G ++GWG+G  G LGLG R     T  L+P                   
Sbjct: 171 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP-----------------ER 208

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
           V S+G    S V   ACG RH+  V+ +GAL T+GW  YGQ GHG   D L P    +L 
Sbjct: 209 VTSTGGEKXSXV---ACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 265

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           +  + QI+ G  HT  ++ +G++Y +G N+FGQ+G G +  +  P  +  P  + ++   
Sbjct: 266 NSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP--DDQKVVQ 323

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           VSCG RH+  +TE   V +WG    GQLG+G+S+DRN P ++
Sbjct: 324 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 365



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 128/252 (50%), Gaps = 29/252 (11%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  K+  ++AG  H++ L     V  WG G +GQLG G                     +
Sbjct: 4   PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-------------------AE 44

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
           DRP   +  +++         +  + CG  H+   + +G  + ++GWG +G+ GHG+++D
Sbjct: 45  DRPSPTQLSALDGH------QIVSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSD 98

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +L  I+++QIA G  H + ++ EG V  +G NQ GQLG G  +   VP+ ++
Sbjct: 99  LFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 158

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
               E  R K V+ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V    G  
Sbjct: 159 A--FEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 216

Query: 448 PRNIACGWWHTL 459
              +ACGW HT+
Sbjct: 217 XSXVACGWRHTI 228


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 177/394 (44%), Gaps = 47/394 (11%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHC 116
           G   ++A      + +WG  +D GQ  L  G   + P P  L T     ++    G  H 
Sbjct: 26  GASHSVALLSGNIVCSWGRGED-GQ--LGHGDAEDRPTPTQLSTLDGLDIISITCGADHT 82

Query: 117 VSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSD 169
            S +E+  EVY+WGW           DFG  G       F         +L   Q    D
Sbjct: 83  TSYSESRMEVYSWGWG----------DFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGD 132

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
                  +     S  R ++     G    +L P  +    GV I  VAAG  HT  +++
Sbjct: 133 SHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTE 192

Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            G+++GWG+G  G LGLG R        L+P      +G D+ ++V              
Sbjct: 193 DGELYGWGWGRYGNLGLGDR-----NDRLVPEKVSLVNG-DKMIMV-------------- 232

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
                ACG RH+  V+ +G L T+GW  YGQ GHG   D L P    +L D  +  I+ G
Sbjct: 233 -----ACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKVEALRDSYISMISGG 287

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
             HT+ ++ +G +Y +G N+FGQ+G G +     P  ++ P  ++     +SCG RH+  
Sbjct: 288 WRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLA 347

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           +TE   V SWG    GQLG G+S+DRN+P ++ +
Sbjct: 348 ITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEV 381



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 141/279 (50%), Gaps = 38/279 (13%)

Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
           E E  ASG E            P  ++  ++AG  H++ L     V  WG G +GQLG G
Sbjct: 3   EDEGAASGSEVS---------GPIRQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHG 53

Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
              +  PTP  +  L+    G D                    +  I CG  H+   +++
Sbjct: 54  D-AEDRPTPTQLSTLD----GLD--------------------IISITCGADHTTSYSES 88

Query: 308 GA-LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
              + ++GWG +G+ GHG+++D   P    +L  +++ QIA G  H + ++++G V  +G
Sbjct: 89  RMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWG 148

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            NQ GQLG G  +   VP+ ++    +    K+V+ GA H+A +TEDG++  WGW +YG 
Sbjct: 149 RNQNGQLGLGTTEDSLVPQKIQA--FQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGN 206

Query: 427 LGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
           LGLGD  DR +P  V  ++G     +ACGW HT+ ++ +
Sbjct: 207 LGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSS 245


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 178/397 (44%), Gaps = 55/397 (13%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--------ASVVKAA 110
           G   ++A    G + +WG  +D GQ  L  G   + P P  L           ASVV   
Sbjct: 33  GASHSVALLSGGVVCSWGRGED-GQ--LGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 89

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQ 164
           A      S  E  ++Y+WGW           DFG  G       F          +   Q
Sbjct: 90  ADHTTAYSDEEL-QLYSWGWG----------DFGRLGHGNSSDVFNPQPIQALQGVRITQ 138

Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
               D       V     S  R ++     G+   +L P  +    GV++  +AAG  HT
Sbjct: 139 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHT 198

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
             +++ G ++GWG+G  G LGLG R                    DR +  +  SVN   
Sbjct: 199 AAVTEDGDLYGWGWGRYGNLGLGDR-------------------DDRLIPEKVSSVN--- 236

Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
             G+  V  +ACG RH+  V+ +G++ T+GW  YGQ GHG   D L P    +L D  + 
Sbjct: 237 --GQKMVL-VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTIS 293

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           QI+ G  HT+ ++ +G++Y +G N+FGQ+G G ++    P  +  P    ++   V+CG 
Sbjct: 294 QISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFP--NEQKVVQVACGW 351

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           RH+  LTE   V SWG    GQLG G+ +DRNIP ++
Sbjct: 352 RHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMI 388



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 176/389 (45%), Gaps = 59/389 (15%)

Query: 96  EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC------------VPSAKVTRDF 143
           E  P   E SVV  +AG +H V++   G V +WG  E             VP+  +T  F
Sbjct: 17  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTV-LTAAF 75

Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
                   D+ G  +++    A  +   + EE+   +  S    +      G+     +P
Sbjct: 76  -------DDAPGGVASVVICGADHTTAYSDEEL---QLYSWGWGDFGRLGHGNSSDVFNP 125

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             +    GV+IT++A G  H L ++  G V  WG    GQLGLG+         L+P   
Sbjct: 126 QPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGN-----TEDSLLPQKI 180

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
            A  G      VR              VK IA G  H+A VT+ G L  +GWG YG  G 
Sbjct: 181 QAFEG------VR--------------VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 220

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G  +D+L P   SS+   ++  +A G  HT+ +S  G +Y +G +++GQLG G  +   V
Sbjct: 221 GDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLV 280

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           P  LE   L+      +S G RH+  L  DG++  WGWNK+GQ+G+GD+ D       P+
Sbjct: 281 PHKLEA--LKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDH----CSPV 334

Query: 444 HGFLPR-----NIACGWWHTLLLAETTQI 467
               P       +ACGW HTL L E   +
Sbjct: 335 QVNFPNEQKVVQVACGWRHTLALTEAKNV 363



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 143/349 (40%), Gaps = 61/349 (17%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKA 109
           +CG     A +  E  +L +WG  D           HG + + F P P +A     + + 
Sbjct: 87  ICGADHTTAYSDEEL-QLYSWGWGD------FGRLGHGNSSDVFNPQPIQALQGVRITQI 139

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           A G +HC++VT AG V++WG  +              G     +T + S LP +      
Sbjct: 140 ACGDSHCLAVTVAGHVHSWGRNQ-------------NGQLGLGNT-EDSLLPQKIQAFEG 185

Query: 170 KRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAA 219
            R          T++  E+ +          N   GD    L P  V+   G K+  VA 
Sbjct: 186 VRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVAC 245

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G RHT+ +S  G ++ +G+   GQLG G     +  PH +  L      KD         
Sbjct: 246 GWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL-VPHKLEAL------KD--------- 289

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                    + + +I+ G RH+  +   G L  +GW  +GQ G G   D   P   +   
Sbjct: 290 ---------TTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPN 340

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           + +V Q+A G  HT+ ++    V+ +G    GQLG G     N+PK+++
Sbjct: 341 EQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMID 389



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 122/313 (38%), Gaps = 51/313 (16%)

Query: 36  SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
           S + +P P +   G     +  G     LA + +G + +WG  +  GQ  L + +    P
Sbjct: 120 SDVFNPQPIQALQGVRITQIACGDS-HCLAVTVAGHVHSWGR-NQNGQLGLGNTEDSLLP 177

Query: 96  EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
           +         V   AAG  H  +VTE G++Y WGW            +G+ G   +D   
Sbjct: 178 QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGR----------YGNLGLGDRDD-- 225

Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCL 205
               +P + +  + ++        R T +                    GD    L P  
Sbjct: 226 --RLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHK 283

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
           +       I++++ G RHT+ L+  G+++GWG+   GQ+G+G         H  P     
Sbjct: 284 LEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDN-----EDHCSPV---- 334

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                         VN   +     V ++ACG RH+  +T+A  + ++G G  GQ GHG 
Sbjct: 335 -------------QVNFPNE---QKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGE 378

Query: 326 TNDQLRPSYASSL 338
             D+  P    +L
Sbjct: 379 IVDRNIPKMIDAL 391


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 178/397 (44%), Gaps = 55/397 (13%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--------ASVVKAA 110
           G   ++A    G + +WG  +D GQ  L  G   + P P  L           ASVV   
Sbjct: 28  GASHSVALLSGGVVCSWGRGED-GQ--LGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQ 164
           A      S  E  ++Y+WGW           DFG  G       F          +   Q
Sbjct: 85  ADHTTAYSDEEL-QLYSWGWG----------DFGRLGHGNSSDVFNPQPIQALQGVRITQ 133

Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
               D       V     S  R ++     G+   +L P  +    GV++  +AAG  HT
Sbjct: 134 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHT 193

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
             +++ G ++GWG+G  G LGLG R                    DR +  +  SVN   
Sbjct: 194 AAVTEDGDLYGWGWGRYGNLGLGDR-------------------DDRLIPEKVSSVN--- 231

Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
             G+  V  +ACG RH+  V+ +G++ T+GW  YGQ GHG   D L P    +L D  + 
Sbjct: 232 --GQKMVL-VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTIS 288

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           QI+ G  HT+ ++ +G++Y +G N+FGQ+G G ++    P  +  P    ++   V+CG 
Sbjct: 289 QISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFP--NEQKVVQVACGW 346

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           RH+  LTE   V SWG    GQLG G+ +DRNIP ++
Sbjct: 347 RHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMI 383



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 176/389 (45%), Gaps = 59/389 (15%)

Query: 96  EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC------------VPSAKVTRDF 143
           E  P   E SVV  +AG +H V++   G V +WG  E             VP+  +T  F
Sbjct: 12  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTV-LTAAF 70

Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
                   D+ G  +++    A  +   + EE+   +  S    +      G+     +P
Sbjct: 71  -------DDAPGGVASVVICGADHTTAYSDEEL---QLYSWGWGDFGRLGHGNSSDVFNP 120

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             +    GV+IT++A G  H L ++  G V  WG    GQLGLG+         L+P   
Sbjct: 121 QPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGN-----TEDSLLPQKI 175

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
            A  G      VR              VK IA G  H+A VT+ G L  +GWG YG  G 
Sbjct: 176 QAFEG------VR--------------VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 215

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G  +D+L P   SS+   ++  +A G  HT+ +S  G +Y +G +++GQLG G  +   V
Sbjct: 216 GDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLV 275

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           P  LE   L+      +S G RH+  L  DG++  WGWNK+GQ+G+GD+ D       P+
Sbjct: 276 PHKLEA--LKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDH----CSPV 329

Query: 444 HGFLPR-----NIACGWWHTLLLAETTQI 467
               P       +ACGW HTL L E   +
Sbjct: 330 QVNFPNEQKVVQVACGWRHTLALTEAKNV 358



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 143/349 (40%), Gaps = 61/349 (17%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKA 109
           +CG     A +  E  +L +WG  D           HG + + F P P +A     + + 
Sbjct: 82  ICGADHTTAYSDEEL-QLYSWGWGD------FGRLGHGNSSDVFNPQPIQALQGVRITQI 134

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           A G +HC++VT AG V++WG  +              G     +T + S LP +      
Sbjct: 135 ACGDSHCLAVTVAGHVHSWGRNQ-------------NGQLGLGNT-EDSLLPQKIQAFEG 180

Query: 170 KRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAA 219
            R          T++  E+ +          N   GD    L P  V+   G K+  VA 
Sbjct: 181 VRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVAC 240

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G RHT+ +S  G ++ +G+   GQLG G     +  PH +  L      KD         
Sbjct: 241 GWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL-VPHKLEAL------KD--------- 284

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                    + + +I+ G RH+  +   G L  +GW  +GQ G G   D   P   +   
Sbjct: 285 ---------TTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPN 335

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           + +V Q+A G  HT+ ++    V+ +G    GQLG G     N+PK+++
Sbjct: 336 EQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMID 384



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 122/313 (38%), Gaps = 51/313 (16%)

Query: 36  SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
           S + +P P +   G     +  G     LA + +G + +WG  +  GQ  L + +    P
Sbjct: 115 SDVFNPQPIQALQGVRITQIACGDS-HCLAVTVAGHVHSWGR-NQNGQLGLGNTEDSLLP 172

Query: 96  EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
           +         V   AAG  H  +VTE G++Y WGW            +G+ G   +D   
Sbjct: 173 QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGR----------YGNLGLGDRDD-- 220

Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCL 205
               +P + +  + ++        R T +                    GD    L P  
Sbjct: 221 --RLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHK 278

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
           +       I++++ G RHT+ L+  G+++GWG+   GQ+G+G         H  P     
Sbjct: 279 LEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDN-----EDHCSPV---- 329

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                         VN   +     V ++ACG RH+  +T+A  + ++G G  GQ GHG 
Sbjct: 330 -------------QVNFPNE---QKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGE 373

Query: 326 TNDQLRPSYASSL 338
             D+  P    +L
Sbjct: 374 IVDRNIPKMIDAL 386


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 172/383 (44%), Gaps = 46/383 (12%)

Query: 69  SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE-VY 126
           SG L+ +WG  +D GQ      +    P       +  +     G  H  +++ + + VY
Sbjct: 31  SGDLVCSWGRGED-GQLGHGDAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVY 89

Query: 127 TWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
           +WGW           DFG  G       F          L  +Q    D           
Sbjct: 90  SWGWG----------DFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGE 139

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
                R ++     G     L+P  +T   GV +  +AAG  HT  +++ G+++GWG+G 
Sbjct: 140 VLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGR 199

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
            G LGLG R        L+P    A +G+                     +K +ACG RH
Sbjct: 200 YGNLGLGDR-----EDRLVPDQVAAVAGE--------------------LMKMVACGWRH 234

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           +  V ++G + TFGW  YGQ GHG   D L P    +L   +++ I  G  HT  +  +G
Sbjct: 235 TICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDG 294

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           R+Y +G N+FGQ+G G  + ++ P+L++   L+ +   VV CG RH+  +T+ G V SWG
Sbjct: 295 RLYGWGWNKFGQVGCGNTEDQSSPQLVKG--LQDQVVTVVQCGWRHTLAMTDRGNVYSWG 352

Query: 421 WNKYGQLGLGDSIDRNIPSLVPI 443
               GQLG GD++DR+ P  + I
Sbjct: 353 RGTSGQLGHGDTVDRSTPKRIEI 375



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 135/258 (52%), Gaps = 28/258 (10%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++ ++A G  H L ++  G+V GWG    GQLGLG   + V TPH +   E  A    
Sbjct: 118 GLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLG-HTEDVLTPHKLTAFEGVA---- 172

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                               VK +A G  H+  VT+ G L  +GWG YG  G G   D+L
Sbjct: 173 --------------------VKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRL 212

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P   +++    ++ +A G  HT+C++  G +Y FG +++GQLG G      +P  ++  
Sbjct: 213 VPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQA- 271

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPR 449
            L+SK+ + ++ G RH+  L  DG++  WGWNK+GQ+G G++ D++ P LV  +   +  
Sbjct: 272 -LKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVT 330

Query: 450 NIACGWWHTLLLAETTQI 467
            + CGW HTL + +   +
Sbjct: 331 VVQCGWRHTLAMTDRGNV 348



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 133/255 (52%), Gaps = 31/255 (12%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDR 271
           ++  ++AG  H++ L     V  WG G +GQLG G +  +  PT  ++  L+        
Sbjct: 15  QVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPT--IVSALDDCE----- 67

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA-GALLTFGWGLYGQCGHGSTNDQL 330
                              +  + CG  H+  ++++   + ++GWG +G+ GHG+++D  
Sbjct: 68  -------------------ISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLF 108

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P    +L  ++V+QIA G  H + I+ +G V  +G NQ GQLG G    E+V    +  
Sbjct: 109 IPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLG--HTEDVLTPHKLT 166

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPR 449
             E    K+++ GA H+  +TE+G++  WGW +YG LGLGD  DR +P  V  + G L +
Sbjct: 167 AFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMK 226

Query: 450 NIACGWWHTLLLAET 464
            +ACGW HT+ +AE+
Sbjct: 227 MVACGWRHTICVAES 241


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 181/409 (44%), Gaps = 59/409 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
           G   ++A   S  + +WG  +D GQ  L  G   + P P     F +P  ASVV   A  
Sbjct: 28  GANHSVALLSSKAVCSWGRGED-GQ--LGHGDAEDRPVPTLLSGFDVPGIASVVICGADH 84

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPP 167
               S  E  ++Y+WGW           DFG  G       F          +  +Q   
Sbjct: 85  TTAYS-DEQMQLYSWGWG----------DFGRLGHGNSSDVFHPQPIEALQGIKIKQIAC 133

Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
            D          +  S  R ++     G+   +L P  +    GV +  +AAG  HT  +
Sbjct: 134 GDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAI 193

Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
            + G ++GWG+G  G LGLG R        L+P    +  G+   L              
Sbjct: 194 LEDGDLYGWGWGQYGNLGLGDR-----NDRLVPEKVSSVEGEKMVL-------------- 234

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
                 +ACG RH+  V+ +G L T+GW  YGQ GHG   D L P    +L D  + QIA
Sbjct: 235 ------VACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQIA 288

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGAR 405
            G  HT+ ++ +G++Y +G N+FGQ+G     A+NV       ++     KV  V+CG R
Sbjct: 289 GGWRHTMAVAGDGKLYGWGWNKFGQVGV----ADNVDHCSPVQVIFPDEQKVAQVACGWR 344

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP---IHGFLPRNI 451
           H+  LTE+  V SWG    GQLG G+ IDRN P ++    + G+  +N+
Sbjct: 345 HTLALTENKNVFSWGRGTSGQLGHGEIIDRNTPKMIDALSLDGYACKNL 393



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 28/260 (10%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P   +  V+AG  H++ L     V  WG G +GQLG G   +  P P L+       SG 
Sbjct: 18  PEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGD-AEDRPVPTLL-------SGF 69

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
           D P                     + CG  H+   +D    L ++GWG +G+ GHG+++D
Sbjct: 70  DVP----------------GIASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSD 113

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +L  I+++QIA G  H + ++  G+V+ +G NQ GQLG G  +   +P+ + 
Sbjct: 114 VFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIH 173

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
               E    K+++ GA H+A + EDG +  WGW +YG LGLGD  DR +P  V  + G  
Sbjct: 174 A--FEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEK 231

Query: 448 PRNIACGWWHTLLLAETTQI 467
              +ACGW HT+ ++ +  +
Sbjct: 232 MVLVACGWRHTVTVSSSGDL 251



 Score = 45.1 bits (105), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 6/80 (7%)

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
           E P    +   +VS GA HS  L     V SWG  + GQLG GD+ DR +P+L  + GF 
Sbjct: 13  EVPEAPEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTL--LSGFD 70

Query: 448 PRNIA----CGWWHTLLLAE 463
              IA    CG  HT   ++
Sbjct: 71  VPGIASVVICGADHTTAYSD 90


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 180/388 (46%), Gaps = 61/388 (15%)

Query: 69  SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTE 121
           SG ++ +WG  +D GQ       HG+T +   LPT+ S      +V    G  H ++ +E
Sbjct: 32  SGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTQLSALDAQQIVSVVCGADHTLAYSE 84

Query: 122 AG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGE 174
           +  EVY+WGW           DFG  G       F          L  +Q    D     
Sbjct: 85  SKVEVYSWGWG----------DFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLA 134

Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
             ++    S  R ++     G    +L P  +    GV I  VAAG  H++ +++ G+++
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELY 194

Query: 235 GWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
           GWG+G  G LGLG R  + +P    + C        D+ +LV                  
Sbjct: 195 GWGWGRYGNLGLGDRNDRCIPEKVSVDC--------DKMVLV------------------ 228

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
            ACG RH+  V+ +G L T+GW  YGQ GHG   D L P    +  D  + Q++ G  HT
Sbjct: 229 -ACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHT 287

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           + ++  G++Y +G N+FGQ+G G +     P  ++ P    ++   +SCG RH+  +TE 
Sbjct: 288 MALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKFP--HDQKVAQISCGWRHTIAVTEK 345

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
             V SWG    GQLG+GD+ID N P ++
Sbjct: 346 DNVYSWGRGTNGQLGIGDTIDWNYPKII 373



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 136/259 (52%), Gaps = 28/259 (10%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  ++  ++AGG H++ L     V  WG G +GQLG G                      
Sbjct: 13  PPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDT-------------------D 53

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
           DR L  +  ++++        +  + CG  H+   +++   + ++GWG +G+ GHG+++D
Sbjct: 54  DRLLPTQLSALDAQ------QIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSD 107

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +L  ++++QIA G  H + +++EG V  +G NQ GQLG G  +   VP+ ++
Sbjct: 108 LFIPQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQ 167

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
           T   +    K+V+ GA HS  +TE+G++  WGW +YG LGLGD  DR IP  V +     
Sbjct: 168 T--FQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKM 225

Query: 449 RNIACGWWHTLLLAETTQI 467
             +ACGW HT+ ++ + ++
Sbjct: 226 VLVACGWRHTISVSSSGEL 244


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 179/393 (45%), Gaps = 51/393 (12%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHC 116
           G   ++A      + TWG  +D GQ  L  G   +   P  L T     ++    G  H 
Sbjct: 22  GASHSVALLSGNVVCTWGRGED-GQ--LGHGDAQDRLSPTILSTLEGLEIISVICGADHT 78

Query: 117 VSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSD 169
           ++ +E+  +VY+WGW           DFG  G       F      +   L  +Q    D
Sbjct: 79  IAYSESHTDVYSWGWG----------DFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGD 128

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
                  ++ +  S  R ++     G    +L P  +    GV I  VAAG  HT  +++
Sbjct: 129 SHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTE 188

Query: 230 MGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G+++GWG+G  G LGLG R  ++VP    +P  E                         
Sbjct: 189 DGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVM--------------------- 227

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
                +ACG RH+  V+ +G L T+GW  YGQ GHG   D L P    +L    + QI+ 
Sbjct: 228 -----VACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQISG 282

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G  HT+ ++ +G++Y +G N+FGQ+G G +   + P  ++ P+   ++  ++SCG RH+ 
Sbjct: 283 GWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPL--EQKVILISCGWRHTL 340

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            +TE   V SWG    GQLG G+  DRN+P ++
Sbjct: 341 AVTERQNVFSWGRGTNGQLGNGECTDRNVPVII 373



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 134/276 (48%), Gaps = 38/276 (13%)

Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
           + FT  P  +    G+KI ++A G  H L ++  GQV  WG    GQLGLG+        
Sbjct: 106 DLFTPQP--IRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGT-----TED 158

Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
            L+P    A  G                      +K +A G  H+A VT+ G L  +GWG
Sbjct: 159 SLVPQKIQAFQGVP--------------------IKMVAAGAEHTAAVTEDGELYGWGWG 198

Query: 317 LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            YG  G G   D+L P   S     ++  +A G  HT+ +S  G +Y +G +++GQLG G
Sbjct: 199 RYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHG 258

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                 +P  LE   L+      +S G RH+  +T DG++  WGWNK+GQ+G+GD++DR+
Sbjct: 259 DYADHLIPHQLEA--LQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRS 316

Query: 437 IPSLVPIHGFLPRN-----IACGWWHTLLLAETTQI 467
            P  V     LP       I+CGW HTL + E   +
Sbjct: 317 SPVQVK----LPLEQKVILISCGWRHTLAVTERQNV 348



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 134/257 (52%), Gaps = 29/257 (11%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  ++  ++AG  H++ L     V  WG G +GQLG G     + +P ++  LE      
Sbjct: 12  PVRRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRL-SPTILSTLEGLE--- 67

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
                                +  + CG  H+   +++   + ++GWG +G+ GHG+++D
Sbjct: 68  ---------------------IISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSD 106

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P     L  ++++QIA G  H + +++EG+V  +G NQ GQLG G  +   VP+ ++
Sbjct: 107 LFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQ 166

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFL 447
               +    K+V+ GA H+A +TEDG++  WGW +YG LGLGD  DR +P  V + HG  
Sbjct: 167 A--FQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEK 224

Query: 448 PRNIACGWWHTLLLAET 464
              +ACGW HT+ ++ +
Sbjct: 225 MVMVACGWRHTISVSSS 241


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 169/383 (44%), Gaps = 46/383 (12%)

Query: 69  SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE-VY 126
           SG L+ +WG  +D GQ      +    P       +  +     G  H  + +E+   VY
Sbjct: 31  SGDLVCSWGRGED-GQLGHGDAEERHLPLVISALDDCEISSITCGADHTTARSESTRTVY 89

Query: 127 TWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
           +WGW           DFG  G       F   +      L  +Q    D           
Sbjct: 90  SWGWG----------DFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGE 139

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
             S  R ++     G     L P  V    G+ +  +AAG  HT  +++ G+++GWG+G 
Sbjct: 140 VHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGR 199

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
            G LGLG R        L+P    A  G+   L                    +ACG RH
Sbjct: 200 YGNLGLGDR-----NDRLVPGEVAAVPGEKMNL--------------------VACGWRH 234

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           +  V ++G L TFGW  YGQ GHG   D L P    +L +  ++ ++ G  HTV +  +G
Sbjct: 235 TIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDG 294

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            +Y +G N+FGQ+G G     N PKL+ T I+  K  + V+CG RH+  +T+ G V SWG
Sbjct: 295 ELYGWGWNKFGQVGCGNTDDHNSPKLI-TGIVNEKVTR-VTCGWRHTVAITDRGNVYSWG 352

Query: 421 WNKYGQLGLGDSIDRNIPSLVPI 443
               GQLG GD++DR +P  + +
Sbjct: 353 RGTSGQLGHGDAVDRCVPKRIEL 375



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 134/258 (51%), Gaps = 28/258 (10%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G++I ++A G  H L ++  G+V  WG    GQLGLG   + V  P+ +   E  A    
Sbjct: 118 GLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLG-HTEDVLVPNKVAAFEGIA---- 172

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                               VK +A G  H+A VT++G L  +GWG YG  G G  ND+L
Sbjct: 173 --------------------VKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRL 212

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P   +++   ++  +A G  HT+ ++  G +Y FG +++GQLG G  +   VP  ++  
Sbjct: 213 VPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQA- 271

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPR 449
            L++K  + VS G RH+  L EDG++  WGWNK+GQ+G G++ D N P L+  I      
Sbjct: 272 -LKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVT 330

Query: 450 NIACGWWHTLLLAETTQI 467
            + CGW HT+ + +   +
Sbjct: 331 RVTCGWRHTVAITDRGNV 348



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 129/260 (49%), Gaps = 29/260 (11%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  ++  V+AG  HT+ L     V  WG G +GQLG G                  A  +
Sbjct: 12  PRRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGD-----------------AEER 54

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG-ALLTFGWGLYGQCGHGSTND 328
             PL++               +  I CG  H+   +++   + ++GWG +G+ GHG+++D
Sbjct: 55  HLPLVIS--------ALDDCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSD 106

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P     L  ++++QIA G  H + I+ +G V+ +G NQ GQLG G  +   VP   +
Sbjct: 107 LFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPN--K 164

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFL 447
               E    K+++ GA H+A +TE G++  WGW +YG LGLGD  DR +P  +  + G  
Sbjct: 165 VAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEK 224

Query: 448 PRNIACGWWHTLLLAETTQI 467
              +ACGW HT+ +A +  +
Sbjct: 225 MNLVACGWRHTIAVANSGNL 244


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/265 (36%), Positives = 134/265 (50%), Gaps = 41/265 (15%)

Query: 211  GVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            G+ IT VAA  G  H L +S  G V+ WGY   GQLGLG+ +    TP +I  L      
Sbjct: 3218 GIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLRE---- 3273

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                               + ++   A    HSAVV++ G LLTFG    GQ G   T  
Sbjct: 3274 -------------------KYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQH 3314

Query: 329  QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            Q  P    +L   +V ++A GL+HTV I  +G VY FG N++GQLG    Q   VP L++
Sbjct: 3315 QHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPMLVK 3374

Query: 389  ------TPILES-KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
                  TP+L++  +A  V CG  H+  + E G+V++WG N YGQLG+G    ++I   V
Sbjct: 3375 IPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFV 3434

Query: 442  PIHGFLP-----RNIACGWWHTLLL 461
            P    LP     +  +CG +HTLLL
Sbjct: 3435 P----LPLTSRVKRASCGCYHTLLL 3455



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 127/271 (46%), Gaps = 34/271 (12%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG---LGSRIKMVPTPH 257
           L P     +  VK    + G  H + ++D G  + WGY   GQLG   +G+++ +   P 
Sbjct: 425 LRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYL---PK 481

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           LI  ++                           +K  A    HSA+V+ +G L TFG   
Sbjct: 482 LIESIKEKK------------------------MKSAAVSYHHSALVSVSGELYTFGMND 517

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
            GQ G   T  Q  P    +L+   V  ++ GL+H V  ++ G V+  G N  GQLG G 
Sbjct: 518 CGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGH 577

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           ++   VP  +   +L ++    V+CG  H+  +T  G   S+G N YGQLG+G  I +NI
Sbjct: 578 NKQVKVPTQV---VLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNI 634

Query: 438 PSLVPIHGFLPR-NIACGWWHTLLLAETTQI 467
           P  + I       + ACG +HTLL++++ Q+
Sbjct: 635 PIALTISSNTRMVHAACGCYHTLLMSDSGQV 665



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 32/236 (13%)

Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            G+++  G    G+LGLG  I+                         +  + S    G  
Sbjct: 347 FGELYSCGQNSYGELGLGDDIE-------------------------RHQLTSVPLCGWD 381

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQI 346
           +++++  G    A++T  G +LT G    GQCGHG+ +++   LRP  A     ++    
Sbjct: 382 HIRQVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINA 441

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           + G  H + I+  G  Y +G N  GQLG   V     +PKL+E+  ++ K+ K  +    
Sbjct: 442 SNGCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYLPKLIES--IKEKKMKSAAVSYH 499

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLL 460
           HSA+++  G++ ++G N  GQLGL  +  ++ P LV  + G     ++CG +H +L
Sbjct: 500 HSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVL 555



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 163/405 (40%), Gaps = 91/405 (22%)

Query: 39  LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
           L+ +P  LCG D  + V  G    A+ TS+ G ++T G  +  GQ       HG   E  
Sbjct: 372 LTSVP--LCGWDHIRQVVSGNEILAILTSD-GVVLTCG-LNKSGQC-----GHGNFDERV 422

Query: 99  PL--PTEA------SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
            L  P +A        + A+ G  H +++T+ G  Y+WG+ +              G   
Sbjct: 423 MLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYND-------------RGQLG 469

Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL----- 201
            ++ G +  LP             E +K +K  SA     + A    SG E +T      
Sbjct: 470 HENVGTKLYLPKLI----------ESIKEKKMKSAAVSYHHSALVSVSG-ELYTFGMNDC 518

Query: 202 ------------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
                       +P LV    G  ++ V+ G  H ++ +  G+V+  G    GQLGLG  
Sbjct: 519 GQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHN 578

Query: 250 IKM-VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
            ++ VPT  ++P                              V  +ACG  H+  +T  G
Sbjct: 579 KQVKVPTQVVLP---------------------------NELVCFVACGYYHATAITSTG 611

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
              +FG   YGQ G GS   Q  P   +   + ++   A G +HT+ +S  G+V+VFG N
Sbjct: 612 LTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRN 671

Query: 369 QFGQLGTGVDQAENVPKLLET-PILESKRAKVVSCGARHSAVLTE 412
             GQLG   +    +P  L+  P    +R   ++ G   ++++ E
Sbjct: 672 NKGQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAAGFYTTSLIVE 716



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 133/349 (38%), Gaps = 76/349 (21%)

Query: 30   GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL-TS 88
            G   E+  + SPIPA L G          GC   LA S  G + +WG  +D GQ  L T+
Sbjct: 3201 GNFDERLIVPSPIPA-LSGIPITMVAASNGCEHMLAISHDGAVYSWG-YNDRGQLGLGTT 3258

Query: 89   GKHGETPEPF-PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
                 TP     L  +  +  AA  + H   V+  G++ T+G  +             +G
Sbjct: 3259 VSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMND-------------SG 3305

Query: 148  SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
                D T  Q                                            +P LV 
Sbjct: 3306 QLGLDHTQHQH-------------------------------------------TPQLVE 3322

Query: 208  LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
                 K+ +VA G  HT+ + D G V+ +G    GQLGL S  +    P L+        
Sbjct: 3323 TLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGL-SHTQNTKVPMLVKI------ 3375

Query: 268  GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
                P   R   +++  KA + Y     CG  H+  + + G ++T+G   YGQ G GS  
Sbjct: 3376 ----PPAPRTPMLDAVNKAVQVY-----CGYYHTVTILECGKVVTWGRNDYGQLGIGSKE 3426

Query: 328  DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
             +    +    +  +V++ + G +HT+ + V GR  VFG N  GQLG  
Sbjct: 3427 HKSIAQFVPLPLTSRVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLGVA 3475



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 12/197 (6%)

Query: 278  GSVNSSGKAGR----SY--VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL- 330
            G  N + K  R    SY  ++ IA G     V+   GA+ T G    GQCG G+ +++L 
Sbjct: 3149 GHCNPTNKLERASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLI 3208

Query: 331  RPSYASSLMDIQVEQIAA--GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLL 387
             PS   +L  I +  +AA  G  H + IS +G VY +G N  GQLG G   ++ + P+++
Sbjct: 3209 VPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVI 3268

Query: 388  ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGF 446
            E+ + E       +    HSAV++ +G +L++G N  GQLGL  +  ++ P LV  +   
Sbjct: 3269 ES-LREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQ 3327

Query: 447  LPRNIACGWWHTLLLAE 463
                +ACG +HT+ + +
Sbjct: 3328 KVGRVACGLYHTVAIVD 3344



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 94/237 (39%), Gaps = 32/237 (13%)

Query: 67  SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
           S SG+L T+G  +D GQ  L   +H  TP+         V   + G  H V  T +GEV+
Sbjct: 505 SVSGELYTFG-MNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVF 563

Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD---------KRAGEEVV 177
           T G            D G  G        KQ  +PT+   P++           A     
Sbjct: 564 TCG----------KNDHGQLGL----GHNKQVKVPTQVVLPNELVCFVACGYYHATAITS 609

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
                S  R +      G +     P  +T++   ++   A G  HTL++SD GQV+ +G
Sbjct: 610 TGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFG 669

Query: 238 YGGEGQLG--------LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
              +GQLG        L   +K+ P  ++  CL  AA      L+V +   N  G A
Sbjct: 670 RNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAAGFYTTSLIVERKRENDEGDA 726



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 3/91 (3%)

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            E  ++  G N +G+L  G     N  KL        K  + ++ G     VL +DG V +
Sbjct: 3132 ECEIFSCGQNNYGELCLGHCNPTN--KLERASFFSYKSIQSIAGGNEVLVVLMKDGAVFT 3189

Query: 419  WGWNKYGQLGLGDSIDRNI-PSLVPIHGFLP 448
             G NK GQ G+G+  +R I PS +P    +P
Sbjct: 3190 CGLNKSGQCGIGNFDERLIVPSPIPALSGIP 3220


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 174/392 (44%), Gaps = 45/392 (11%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   ++A      + +WG  +D GQ      +   +P          VV    G  H  +
Sbjct: 24  GASHSVALLSGNVVCSWGRGED-GQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTA 82

Query: 119 VTEA-GEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKR 171
            +E+  +VY+WGW           DFG  G       F          L  +Q    D  
Sbjct: 83  YSESFTQVYSWGWG----------DFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSH 132

Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
                +     S  R ++     G    +L P  +    GV +  VAAG  HT  +++ G
Sbjct: 133 CLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDG 192

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           +++GWG+G  G LGLG R   +  P  +  +E                       G   V
Sbjct: 193 ELYGWGWGRYGNLGLGDRNDRL-VPEKVSTVE-----------------------GVKMV 228

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           K +ACG RH+  V+ +G L T+GW  YGQ GHG   D L P    +L +  + +I+ G  
Sbjct: 229 K-VACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWR 287

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           HT+ ++ +G++Y +G N+FGQ+G G +     P  ++ P    ++   +SCG RH+  +T
Sbjct: 288 HTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFP--HEQKVVHISCGWRHTLAVT 345

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           E   V SWG    GQLG G+SIDRNIP ++ +
Sbjct: 346 ERQNVFSWGRGTNGQLGHGESIDRNIPKMIEV 377



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 149/312 (47%), Gaps = 33/312 (10%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD-MGQVWGWGYGGEGQL 244
           R E      GD    LSP  ++   G ++  V  G  HT   S+   QV+ WG+G  G+L
Sbjct: 42  RGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGWGDFGRL 101

Query: 245 GLGSRIKMVPTPHLIPCL-----EHAASGKDRPLLV-RQGSVNSSGKAGRSY-------- 290
           G G+   +  TP  I  L     +  A G    L V   G V S G+             
Sbjct: 102 GHGNSSDLF-TPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTED 160

Query: 291 --------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         VK +A G  H+A VT+ G L  +GWG YG  G G  ND+L P   S
Sbjct: 161 SLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVS 220

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
           ++  +++ ++A G  HT+ +S  G +Y +G +++GQLG G  +    P  LE   L+   
Sbjct: 221 TVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEA--LQENL 278

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGW 455
              +S G RH+  LT DG++  WGWNK+GQ+G+GD++D   P  V   H     +I+CGW
Sbjct: 279 ISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGW 338

Query: 456 WHTLLLAETTQI 467
            HTL + E   +
Sbjct: 339 RHTLAVTERQNV 350



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 131/257 (50%), Gaps = 29/257 (11%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  ++  ++AG  H++ L     V  WG G +GQLG G          L P    A  G 
Sbjct: 14  PVRRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGD-----AEDRLSPTYLSALDGH 68

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA-GALLTFGWGLYGQCGHGSTND 328
           +                    V  + CG  H+   +++   + ++GWG +G+ GHG+++D
Sbjct: 69  E--------------------VVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSD 108

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +L  ++++QIA G  H + ++++G V  +G NQ GQLG G  +   VP+ ++
Sbjct: 109 LFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQ 168

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
               +    K+V+ GA H+A +TEDG++  WGW +YG LGLGD  DR +P  V  + G  
Sbjct: 169 A--FQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVK 226

Query: 448 PRNIACGWWHTLLLAET 464
              +ACGW HT+ ++ +
Sbjct: 227 MVKVACGWRHTISVSSS 243



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIAC 453
           +R  ++S GA HS  L     V SWG  + GQLG GD+ DR  P+ L  + G    ++ C
Sbjct: 16  RRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTC 75

Query: 454 GWWHTLLLAET-TQI 467
           G  HT   +E+ TQ+
Sbjct: 76  GADHTTAYSESFTQV 90



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           GG    +A +  GKL  WG  +  GQ  +       +P     P E  VV  + GW H +
Sbjct: 284 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTL 342

Query: 118 SVTEAGEVYTWG 129
           +VTE   V++WG
Sbjct: 343 AVTERQNVFSWG 354


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 174/396 (43%), Gaps = 57/396 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAG 112
           G   ++A      L +WG  +D GQ       HG+  +   +PT  S      +     G
Sbjct: 22  GASHSVALLTGNVLCSWGRGED-GQL-----GHGDAEDRL-VPTVLSGFDAPGITSVICG 74

Query: 113 WAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQA 165
             H  + +E   +VY+WGW           DFG  G       F          L  +Q 
Sbjct: 75  ADHTTAYSEDELQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGLKIKQI 124

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
              D       +  +  S  R ++     G    +L P  +    GV +  +AAG  HT 
Sbjct: 125 ACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTA 184

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            +++ G ++GWG+G  G LGLG R        L+P    +  G+   L            
Sbjct: 185 AVTEDGDLYGWGWGRYGNLGLGDR-----NDRLLPEKVSSVEGEKMVL------------ 227

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
                   +ACG RH+  V+D+G L T+GW  YGQ GHG   D L P    +L D  + Q
Sbjct: 228 --------VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQ 279

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           I+ G  HT+ ++ EG++Y +G N+FGQ+G G +     P  +  P  E ++   V+CG R
Sbjct: 280 ISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFP--EDQKISQVACGWR 337

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           H+  L+E   V SWG    GQLG G+ +DRN P L+
Sbjct: 338 HTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLI 373



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 137/278 (49%), Gaps = 36/278 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+     +P  V    G+KI ++A G  H L ++  GQV  WG    GQLGLG+    + 
Sbjct: 102 GNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSL- 160

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P  I   E                           VK IA G  H+A VT+ G L  +G
Sbjct: 161 LPQKIQAFEGVC------------------------VKMIAAGAEHTAAVTEDGDLYGWG 196

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG YG  G G  ND+L P   SS+   ++  +A G  HT+ +S  G +Y +G +++GQLG
Sbjct: 197 WGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLG 256

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G  +   VP  LE   L+      +S G RH+  LT +G++  WGWNK+GQ+G+G++ D
Sbjct: 257 HGDFEDHLVPHKLEA--LKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDD 314

Query: 435 RNIPSLVPIHGFLPRN-----IACGWWHTLLLAETTQI 467
              P  V +H   P +     +ACGW HTL L+E   +
Sbjct: 315 HCSP--VQVH--FPEDQKISQVACGWRHTLALSEKKNV 348



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 136/262 (51%), Gaps = 31/262 (11%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAAS 267
           +P   +  V+AG  H++ L     +  WG G +GQLG G +  ++VPT           S
Sbjct: 11  SPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPT---------VLS 61

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGST 326
           G D P                  +  + CG  H +A   D   + ++GWG +G+ GHG++
Sbjct: 62  GFDAP-----------------GITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS 104

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
           +D   P    +L  ++++QIA G  H + +++ G+V  +G NQ GQLG G  +   +P+ 
Sbjct: 105 SDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQK 164

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHG 445
           ++    E    K+++ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V  + G
Sbjct: 165 IQA--FEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEG 222

Query: 446 FLPRNIACGWWHTLLLAETTQI 467
                +ACGW HT+ ++++  +
Sbjct: 223 EKMVLVACGWRHTITVSDSGNL 244



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 130/312 (41%), Gaps = 63/312 (20%)

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
           TP+P        + + A G +HC++VT AG+V +WG                     ++ 
Sbjct: 109 TPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWG---------------------RNQ 147

Query: 154 TGKQSALPTEQAP-PSDKRAGEEVVKR------RKTSSAREESE----------NPASGD 196
            G+     TE +  P   +A E V  +        T++  E+ +          N   GD
Sbjct: 148 NGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGD 207

Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
               L P  V+   G K+  VA G RHT+ +SD G ++ +G+   GQLG G     +  P
Sbjct: 208 RNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL-VP 266

Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
           H +  L+                         S + +I+ G RH+  +T  G L  +GW 
Sbjct: 267 HKLEALKD------------------------STISQISGGWRHTMALTSEGKLYGWGWN 302

Query: 317 LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            +GQ G G+ +D   P       D ++ Q+A G  HT+ +S +  V+ +G    GQLG G
Sbjct: 303 KFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNG 362

Query: 377 VDQAENVPKLLE 388
                N P L++
Sbjct: 363 EIVDRNTPVLID 374



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/333 (22%), Positives = 129/333 (38%), Gaps = 54/333 (16%)

Query: 19  ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
           E  VY WG   +        S + +P P +   G   K +  G     LA + +G++ +W
Sbjct: 85  ELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDS-HCLAVTMAGQVQSW 143

Query: 76  GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
           G  +  GQ  L + +    P+         V   AAG  H  +VTE G++Y WGW     
Sbjct: 144 GR-NQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGR--- 199

Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----- 190
                  +G+ G   ++       LP + +    ++        R T +  +        
Sbjct: 200 -------YGNLGLGDRN----DRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYG 248

Query: 191 -----NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
                    GD    L P  +       I++++ G RHT+ L+  G+++GWG+   GQ+G
Sbjct: 249 WSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 308

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           +G+        H  P   H    +                     + ++ACG RH+  ++
Sbjct: 309 VGNN-----DDHCSPVQVHFPEDQK--------------------ISQVACGWRHTLALS 343

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
           +   + ++G G  GQ G+G   D+  P    +L
Sbjct: 344 EKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDAL 376


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 156/343 (45%), Gaps = 45/343 (13%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGK 156
           E S+V   A      S T    +Y+WGW           DFG  G       F       
Sbjct: 58  EISLVACGADHTTAYSATRL-TIYSWGWG----------DFGRLGHGNSSDLFVPHPIKA 106

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
              L   Q    D             S  R ++     GD   +L P  +    GV +  
Sbjct: 107 LQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKM 166

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLV 275
           +AAG  HT  ++D G+++GWG+G  G LGLG R  +M+P        E  A G ++  +V
Sbjct: 167 LAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPA-------EVPAVGDEKMCMV 219

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                              ACG RH+  V+ +G L T+GW  YGQ GHG   D L P   
Sbjct: 220 -------------------ACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQV 260

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           ++L +  + Q++ G  HTV ++  G++Y +G N+FGQ+G+G       P+L+  P  + +
Sbjct: 261 AALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIP-GQHQ 319

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           R   VSCG RH+  +T+   V SWG    GQLG GD++DR+ P
Sbjct: 320 RVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAP 362



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 130/259 (50%), Gaps = 29/259 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G++I ++A G  H L ++  G+V+ WG    GQLGLG     +  PH +   E  +    
Sbjct: 109 GLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSL-VPHKLLAFEGVS---- 163

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                               VK +A G  H+A VTD+G L  +GWG YG  G G   D++
Sbjct: 164 --------------------VKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRM 203

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P+   ++ D ++  +A G  HT+ +S  G++Y +G +++GQLG G      +P   +  
Sbjct: 204 LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPH--QVA 261

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR- 449
            L       VS G RH+  LTE G++  WGWNK+GQ+G GD  D   P L+ I G   R 
Sbjct: 262 ALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRV 321

Query: 450 -NIACGWWHTLLLAETTQI 467
             ++CGW HT+ + +   +
Sbjct: 322 VQVSCGWRHTVAVTDKNNV 340



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 133/258 (51%), Gaps = 31/258 (12%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           K+  V+AG  HT+ L     V  +G G +GQLG G                     +DR 
Sbjct: 6   KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGD-------------------AEDRL 46

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG-ALLTFGWGLYGQCGHGSTNDQLR 331
           L    G++N         +  +ACG  H+   +     + ++GWG +G+ GHG+++D   
Sbjct: 47  LPRIIGALNDC------EISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFV 100

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETP 390
           P    +L  +++ QIA G  H + ++ +G VY +G NQ GQLG G      VP KLL   
Sbjct: 101 PHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLA-- 158

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR- 449
             E    K+++ GA H+A +T+ G++  WGW +YG LGLGD  DR +P+ VP  G     
Sbjct: 159 -FEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMC 217

Query: 450 NIACGWWHTLLLAETTQI 467
            +ACGW HT+ ++++ ++
Sbjct: 218 MVACGWRHTIAVSQSGKL 235



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 123/315 (39%), Gaps = 50/315 (15%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
             S +  P P +   G   + +  G     LA +  G++ +WG  +  GQ  L       
Sbjct: 94  NSSDLFVPHPIKALQGLEIRQIACGDS-HCLAVTADGEVYSWGR-NQNGQLGLGDTDDSL 151

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
            P         SV   AAG  H  +VT++G++Y WGW             G  G+     
Sbjct: 152 VPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGW-------------GRYGNLGLGD 198

Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSP 203
            G +  LP E     D++        R T +  +  +              GD    L P
Sbjct: 199 RGDR-MLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLP 257

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             V       IT+V+ G RHT+ L++ G+++GWG+   GQ+G G  +    +P LI    
Sbjct: 258 HQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD-VDDHTSPQLISI-- 314

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
                               G+  R  V +++CG RH+  VTD   + ++G G  GQ GH
Sbjct: 315 -------------------PGQHQR--VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGH 353

Query: 324 GSTNDQLRPSYASSL 338
           G   D+  P    +L
Sbjct: 354 GDAVDRSAPKGIQAL 368


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 182/396 (45%), Gaps = 57/396 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA------AAG 112
           G    +A      + +WG  +D GQ       HG+T +  PLPT+ S + A      A G
Sbjct: 22  GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDR-PLPTQLSALDAQHIDSIACG 74

Query: 113 WAHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
             H ++ +E+  E+Y+WGW           DFG  G                  L  +Q 
Sbjct: 75  ADHTLAYSESRNELYSWGWG----------DFGRLGHGNSSDLLIPQPIIALQGLRIKQI 124

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
              D       ++    S  R ++     G+   +L P  +    GV I  VAAG  H++
Sbjct: 125 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSV 184

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            +++ G+++GWG+G  G LGLG R                    DR    +  SV+    
Sbjct: 185 AITENGELYGWGWGRYGNLGLGDR-------------------NDRWNPEKVSSVDCD-- 223

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
                +  +ACG RH+  V+ +G + T+GW  YGQ GHG+  D L P    +L D  + Q
Sbjct: 224 ----KMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQ 279

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           ++ G  H++ ++  G ++ +G N+FGQ+G G +     P  ++ P  + +R   +SCG R
Sbjct: 280 VSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFP--QDQRVVQISCGWR 337

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           H+  +TE   V SWG    GQLG GD+IDRN P ++
Sbjct: 338 HTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKII 373



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 137/261 (52%), Gaps = 29/261 (11%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           +P  ++  ++AG  HT+ L     V  WG G +GQLG G                     
Sbjct: 11  SPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT------------------- 51

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA-GALLTFGWGLYGQCGHGSTN 327
            DRPL  +  ++++       ++  IACG  H+   +++   L ++GWG +G+ GHG+++
Sbjct: 52  DDRPLPTQLSALDA------QHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSS 105

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    +L  ++++QIA G  H + +++EG V  +G NQ GQLG G  +   VP+ +
Sbjct: 106 DLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKI 165

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGF 446
           +    +    K+V+ GA HS  +TE+G++  WGW +YG LGLGD  DR  P  V  +   
Sbjct: 166 QA--FKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCD 223

Query: 447 LPRNIACGWWHTLLLAETTQI 467
               +ACGW HT+ ++ +  I
Sbjct: 224 KMVMVACGWRHTISVSSSGGI 244



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 105/273 (38%), Gaps = 37/273 (13%)

Query: 33  PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
           P+K      +P ++            G   ++A +E+G+L  WG     G   L      
Sbjct: 162 PQKIQAFKGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 211

Query: 93  ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
             PE         +V  A GW H +SV+ +G +YT+GW +          +G  G     
Sbjct: 212 WNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSK----------YGQLGH---- 257

Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLS 202
              + S +P +    SDK   +     R + +             +      GD     S
Sbjct: 258 GNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCS 317

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V      ++ +++ G RHT+ +++   V+ WG G  GQLG G  I    +P +I  L
Sbjct: 318 PVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDR-NSPKIIEAL 376

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
             +  G   P +    +   SGK+G S  +  A
Sbjct: 377 --SVDGSAGPHIESSNTDLLSGKSGVSLSERYA 407


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 156/343 (45%), Gaps = 45/343 (13%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGK 156
           E S+V   A      S T    +Y+WGW           DFG  G       F       
Sbjct: 58  EISLVACGADHTTAYSATRL-TIYSWGWG----------DFGRLGHGNSSDLFVPHPIKA 106

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
              L   Q    D             S  R ++     GD   +L P  +    GV +  
Sbjct: 107 LQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKM 166

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLV 275
           +AAG  HT  ++D G+++GWG+G  G LGLG R  +M+P        E  A G ++  +V
Sbjct: 167 LAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPA-------EVPAVGDEKMCMV 219

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                              ACG RH+  V+ +G L T+GW  YGQ GHG   D L P   
Sbjct: 220 -------------------ACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQV 260

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           ++L +  + Q++ G  HTV ++  G++Y +G N+FGQ+G+G       P+L+  P  + +
Sbjct: 261 AALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIP-GQHQ 319

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           R   VSCG RH+  +T+   V SWG    GQLG GD++DR+ P
Sbjct: 320 RVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAP 362



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 129/259 (49%), Gaps = 29/259 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G++I ++A G  H L ++  G+V+ WG    GQLGLG     +  PH +   E  +    
Sbjct: 109 GLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSL-VPHKLLAFEGVS---- 163

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                               VK +A G  H+A VTD G L  +GWG YG  G G   D++
Sbjct: 164 --------------------VKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRM 203

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P+   ++ D ++  +A G  HT+ +S  G++Y +G +++GQLG G      +P   +  
Sbjct: 204 LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPH--QVA 261

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR- 449
            L       VS G RH+  LTE G++  WGWNK+GQ+G GD  D   P L+ I G   R 
Sbjct: 262 ALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRV 321

Query: 450 -NIACGWWHTLLLAETTQI 467
             ++CGW HT+ + +   +
Sbjct: 322 VQVSCGWRHTVAVTDKNNV 340



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 133/258 (51%), Gaps = 31/258 (12%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           K+  V+AG  HT+ L     V  +G G +GQLG G                     +DR 
Sbjct: 6   KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGD-------------------AEDRH 46

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG-ALLTFGWGLYGQCGHGSTNDQLR 331
           L    G++N         +  +ACG  H+   +     + ++GWG +G+ GHG+++D   
Sbjct: 47  LPRIIGALNDC------EISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFV 100

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETP 390
           P    +L  +++ QIA G  H + ++ +G VY +G NQ GQLG G      VP KLL   
Sbjct: 101 PHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLA-- 158

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR- 449
             E    K+++ GA H+A +T+ G++  WGW +YG LGLGD  DR +P+ VP  G     
Sbjct: 159 -FEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMC 217

Query: 450 NIACGWWHTLLLAETTQI 467
            +ACGW HT+ ++++ ++
Sbjct: 218 MVACGWRHTIAVSQSGKL 235



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 123/317 (38%), Gaps = 54/317 (17%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
             S +  P P +   G   + +    CG    LA +  G++ +WG  +  GQ  L     
Sbjct: 94  NSSDLFVPHPIKALQGLEIRQIA---CGDSHCLAVTADGEVYSWGR-NQNGQLGLGDTDD 149

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
              P         SV   AAG  H  +VT+ G++Y WGW             G  G+   
Sbjct: 150 SLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGW-------------GRYGNLGL 196

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTL 201
              G +  LP E     D++        R T +  +  +              GD    L
Sbjct: 197 GDRGDR-MLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL 255

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
            P  V       IT+V+ G RHT+ L++ G+++GWG+   GQ+G G  +    +P LI  
Sbjct: 256 LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD-VDDHTSPQLISI 314

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                                 G+  R  V +++CG RH+  VTD   + ++G G  GQ 
Sbjct: 315 ---------------------PGQHQR--VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQL 351

Query: 322 GHGSTNDQLRPSYASSL 338
           GHG   D+  P    +L
Sbjct: 352 GHGDAVDRSAPKGIQAL 368



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 15/147 (10%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAAGWAHC 116
           GG    +A +E+GKL  WG  +  GQ          +P+   +P +   VV+ + GW H 
Sbjct: 273 GGWRHTVALTEAGKLYGWG-WNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHT 331

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           V+VT+   VY+WG              G++G         +SA    QA  +D +A E +
Sbjct: 332 VAVTDKNNVYSWG-------------RGTSGQLGHGDAVDRSAPKGIQALSADGKACEGL 378

Query: 177 VKRRKTSSAREESENPASGDEFFTLSP 203
            K  + +       N  S  E + + P
Sbjct: 379 EKSPEPAVTGSGVANWISPSERYAVVP 405


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 173/395 (43%), Gaps = 55/395 (13%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
           G   ++A      L +WG  +D GQ  L  G   +   P     F  P   SV+    G 
Sbjct: 21  GASHSVALLTGNVLCSWGRGED-GQ--LGHGDAEDRLVPTVLSGFDAPAITSVI---CGA 74

Query: 114 AHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAP 166
            H  + +E   +VY+WGW           DFG  G       F          L  +Q  
Sbjct: 75  DHTTAYSEDELQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGLKIKQIA 124

Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
             D       +     S  R ++     G    +L P  +     V +  +AAG  HT  
Sbjct: 125 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAA 184

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           +++ G ++GWG+G  G LGLG R        L+P    +  G+   L             
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDR-----NDRLLPEKVSSVEGEKMVL------------- 226

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
                  +ACG RH+  V+D+G L T+GW  YGQ GHG   D L P    +L D  + QI
Sbjct: 227 -------VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQI 279

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           + G  HT+ ++ EG++Y +G N+FGQ+G G +   + P  +  P  E ++   V+CG RH
Sbjct: 280 SGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFP--EDQKISQVACGWRH 337

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           +  L+E   V SWG    GQLG G+ +DRN P L+
Sbjct: 338 TLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLI 372



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 134/274 (48%), Gaps = 28/274 (10%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+     +P  V    G+KI ++A G  H L ++  G+V  WG    GQLGLG+    + 
Sbjct: 101 GNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSL- 159

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P  I   E                           VK IA G  H+A VT+ G L  +G
Sbjct: 160 LPQKIQAFESVC------------------------VKMIAAGAEHTAAVTEDGDLYGWG 195

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG YG  G G  ND+L P   SS+   ++  +A G  HT+ +S  G +Y +G +++GQLG
Sbjct: 196 WGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLG 255

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G  +   VP  +E   L+      +S G RH+  LT +G++  WGWNK+GQ+G+G++ D
Sbjct: 256 HGDFEDHLVPHKVEA--LKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDD 313

Query: 435 RNIPSLVPI-HGFLPRNIACGWWHTLLLAETTQI 467
            + P  V          +ACGW HTL L+E   +
Sbjct: 314 HSSPGQVSFPEDQKISQVACGWRHTLALSEKKNV 347



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 136/262 (51%), Gaps = 31/262 (11%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAAS 267
           +P   +  V+AG  H++ L     +  WG G +GQLG G +  ++VPT           S
Sbjct: 10  SPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPT---------VLS 60

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGST 326
           G D P                  +  + CG  H +A   D   + ++GWG +G+ GHG++
Sbjct: 61  GFDAPA-----------------ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS 103

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
           +D   P    +L  ++++QIA G  H + +++ G V  +G NQ GQLG G  +   +P+ 
Sbjct: 104 SDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQK 163

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHG 445
           ++    ES   K+++ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V  + G
Sbjct: 164 IQA--FESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEG 221

Query: 446 FLPRNIACGWWHTLLLAETTQI 467
                +ACGW HT+ ++++  +
Sbjct: 222 EKMVLVACGWRHTITVSDSGNL 243



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 131/312 (41%), Gaps = 63/312 (20%)

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
           TP+P        + + A G +HC++VT AGEV +WG                     ++ 
Sbjct: 108 TPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWG---------------------RNQ 146

Query: 154 TGKQSALPTEQAP-PSDKRAGEEVVKR------RKTSSAREESE----------NPASGD 196
            G+     TE +  P   +A E V  +        T++  E+ +          N   GD
Sbjct: 147 NGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGD 206

Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
               L P  V+   G K+  VA G RHT+ +SD G ++ +G+   GQLG G     +  P
Sbjct: 207 RNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL-VP 265

Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
           H +  L+                         S + +I+ G RH+  +T  G L  +GW 
Sbjct: 266 HKVEALKD------------------------STISQISGGWRHTMALTSEGKLYGWGWN 301

Query: 317 LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            +GQ G G+ +D   P   S   D ++ Q+A G  HT+ +S +  V+ +G    GQLG G
Sbjct: 302 KFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNG 361

Query: 377 VDQAENVPKLLE 388
                N P L++
Sbjct: 362 EIVDRNTPVLID 373



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 133/333 (39%), Gaps = 54/333 (16%)

Query: 19  ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
           E  VY WG   +        S + +P P +   G   K +  G     LA + +G++ +W
Sbjct: 84  ELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDS-HCLAVTMAGEVQSW 142

Query: 76  GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
           G  +  GQ  L + +    P+         V   AAG  H  +VTE G++Y WGW     
Sbjct: 143 GR-NQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGR--- 198

Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----- 190
                  +G+ G   ++       LP + +    ++        R T +  +        
Sbjct: 199 -------YGNLGLGDRN----DRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYG 247

Query: 191 -----NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
                    GD    L P  V       I++++ G RHT+ L+  G+++GWG+   GQ+G
Sbjct: 248 WSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           +G+              +H++ G        Q S     K     + ++ACG RH+  ++
Sbjct: 308 VGNND------------DHSSPG--------QVSFPEDQK-----ISQVACGWRHTLALS 342

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
           +   + ++G G  GQ G+G   D+  P    +L
Sbjct: 343 EKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDAL 375


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 178/386 (46%), Gaps = 56/386 (14%)

Query: 69  SGKLI-TWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGWAHCVSVTE- 121
           SG+++ +WG  +D GQ  L  G   + P P     F +P   SV+    G  H ++ ++ 
Sbjct: 38  SGQMVCSWGRGED-GQ--LGHGDSEDRPVPTVLTSFDVPRVTSVI---CGADHTIAYSDD 91

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEE 175
             ++Y+WGW           DFG  G       F          +  +Q    D      
Sbjct: 92  EMQLYSWGWG----------DFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTV 141

Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
               +  S  R ++     G+   +L P  +    GV +  +AAG  HT  +++ G ++G
Sbjct: 142 TFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYG 201

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG+G  G LGL  R                    DR +  +  SV      G   V  +A
Sbjct: 202 WGWGRYGNLGLSDR-------------------DDRSVPEKVSSVE-----GEKMVL-VA 236

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CG RHS  V+ +GAL T+GW  YGQ GHG   D L P    +L D+ + QI+ G  HT+ 
Sbjct: 237 CGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMA 296

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++ +G++Y +G N+FGQ+G   +     P  +E    + ++   V+CG RH+  LTE+  
Sbjct: 297 VAEDGKLYGWGWNKFGQVGVEDNVDHCSP--VEVNFPDEQKIVQVACGWRHTLALTENKN 354

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV 441
           + SWG    GQLG G+ IDRN P ++
Sbjct: 355 IFSWGRGASGQLGHGEIIDRNTPKMI 380



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 131/279 (46%), Gaps = 38/279 (13%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+     +P  +    G+KI ++A G  H L ++  GQV  WG    GQLGLG+    + 
Sbjct: 109 GNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSL- 167

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P  I   E                           VK IA G  H+  +T+ G L  +G
Sbjct: 168 LPQKIKAFEGVC------------------------VKMIAAGAEHTTAITEGGDLYGWG 203

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG YG  G    +D+  P   SS+   ++  +A G  H+V +S  G +Y +G +++GQLG
Sbjct: 204 WGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLG 263

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G  Q   VP+ LE   L+      +S G RH+  + EDG++  WGWNK+GQ+G+ D++D
Sbjct: 264 HGDFQDHLVPRKLEA--LKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVD 321

Query: 435 R------NIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
                  N P    I       +ACGW HTL L E   I
Sbjct: 322 HCSPVEVNFPDEQKI-----VQVACGWRHTLALTENKNI 355



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 136/284 (47%), Gaps = 29/284 (10%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD-MGQVWGWGYGGEGQL 244
           R E      GD      P ++T     ++T V  G  HT+  SD   Q++ WG+G  G+L
Sbjct: 47  RGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRL 106

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G G+   +                  +P++  QG            +K+IACG  H   V
Sbjct: 107 GHGNSSDVF---------------NPQPIVALQGM----------KIKQIACGDSHCLTV 141

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
           T  G + ++G    GQ G G+  D L P    +   + V+ IAAG  HT  I+  G +Y 
Sbjct: 142 TFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYG 201

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G  ++G LG       +VP+ + +  +E ++  +V+CG RHS  ++  G + ++GW+KY
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSS--VEGEKMVLVACGWRHSVSVSSSGALYTYGWSKY 259

Query: 425 GQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTLLLAETTQI 467
           GQLG GD  D  +P  +     +P   I+ GW HT+ +AE  ++
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKL 303



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 56/225 (24%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS---------------- 337
           I+ G  HSA +     + ++G G  GQ GHG + D+  P+  +S                
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHT 85

Query: 338 -------------------------------------LMDIQVEQIAAGLWHTVCISVEG 360
                                                L  ++++QIA G  H + ++  G
Sbjct: 86  IAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNG 145

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           +V+ +G NQ GQLG G +Q   +P+ ++    E    K+++ GA H+  +TE G +  WG
Sbjct: 146 QVHSWGRNQNGQLGLGNNQDSLLPQKIKA--FEGVCVKMIAAGAEHTTAITEGGDLYGWG 203

Query: 421 WNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           W +YG LGL D  DR++P  V  + G     +ACGW H++ ++ +
Sbjct: 204 WGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSS 248



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 9/85 (10%)

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           E VP+  E  ++      ++S GA HSA L     V SWG  + GQLG GDS DR +P++
Sbjct: 13  EAVPEAPEQSVI------LISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTV 66

Query: 441 VPIHGFLPR--NIACGWWHTLLLAE 463
           +     +PR  ++ CG  HT+  ++
Sbjct: 67  LTSFD-VPRVTSVICGADHTIAYSD 90



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)

Query: 42  IPARLCGGDSWKDV----CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
           +P +L   ++ KDV      GG    +A +E GKL  WG  +  GQ  +       +P  
Sbjct: 272 VPRKL---EALKDVPISQISGGWRHTMAVAEDGKLYGWG-WNKFGQVGVEDNVDHCSPVE 327

Query: 98  FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
              P E  +V+ A GW H +++TE   +++WG
Sbjct: 328 VNFPDEQKIVQVACGWRHTLALTENKNIFSWG 359


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 178/386 (46%), Gaps = 56/386 (14%)

Query: 69  SGKLI-TWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGWAHCVSVTE- 121
           SG+++ +WG  +D GQ  L  G   + P P     F +P   SV+    G  H ++ ++ 
Sbjct: 38  SGQMVCSWGRGED-GQ--LGHGDSEDRPVPTVLTSFDVPRVTSVI---CGADHTIAYSDD 91

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEE 175
             ++Y+WGW           DFG  G       F          +  +Q    D      
Sbjct: 92  EMQLYSWGWG----------DFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTV 141

Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
               +  S  R ++     G+   +L P  +    GV +  +AAG  HT  +++ G ++G
Sbjct: 142 TFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYG 201

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG+G  G LGL  R                    DR +  +  SV      G   V  +A
Sbjct: 202 WGWGRYGNLGLSDR-------------------DDRSVPEKVSSVE-----GEKMVL-VA 236

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CG RHS  V+ +GAL T+GW  YGQ GHG   D L P    +L D+ + QI+ G  HT+ 
Sbjct: 237 CGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMA 296

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++ +G++Y +G N+FGQ+G   +     P  +E    + ++   V+CG RH+  LTE+  
Sbjct: 297 VAEDGKLYGWGWNKFGQVGVEDNVDHCSP--VEVNFPDEQKIVQVACGWRHTLALTENKN 354

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV 441
           + SWG    GQLG G+ IDRN P ++
Sbjct: 355 IFSWGRGASGQLGHGEIIDRNTPKMI 380



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 131/279 (46%), Gaps = 38/279 (13%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+     +P  +    G+KI ++A G  H L ++  GQV  WG    GQLGLG+    + 
Sbjct: 109 GNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSL- 167

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P  I   E                           VK IA G  H+  +T+ G L  +G
Sbjct: 168 LPQKIKAFEGVC------------------------VKMIAAGAEHTTAITEGGDLYGWG 203

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG YG  G    +D+  P   SS+   ++  +A G  H+V +S  G +Y +G +++GQLG
Sbjct: 204 WGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLG 263

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G  Q   VP+ LE   L+      +S G RH+  + EDG++  WGWNK+GQ+G+ D++D
Sbjct: 264 HGDFQDHLVPRKLEA--LKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVD 321

Query: 435 R------NIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
                  N P    I       +ACGW HTL L E   I
Sbjct: 322 HCSPVEVNFPDEQKI-----VQVACGWRHTLALTENKNI 355



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 136/284 (47%), Gaps = 29/284 (10%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD-MGQVWGWGYGGEGQL 244
           R E      GD      P ++T     ++T V  G  HT+  SD   Q++ WG+G  G+L
Sbjct: 47  RGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRL 106

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G G+   +                  +P++  QG            +K+IACG  H   V
Sbjct: 107 GHGNSSDVF---------------NPQPIVALQGM----------KIKQIACGDSHCLTV 141

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
           T  G + ++G    GQ G G+  D L P    +   + V+ IAAG  HT  I+  G +Y 
Sbjct: 142 TFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYG 201

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G  ++G LG       +VP+ + +  +E ++  +V+CG RHS  ++  G + ++GW+KY
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSS--VEGEKMVLVACGWRHSVSVSSSGALYTYGWSKY 259

Query: 425 GQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTLLLAETTQI 467
           GQLG GD  D  +P  +     +P   I+ GW HT+ +AE  ++
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKL 303



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 56/225 (24%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS---------------- 337
           I+ G  HSA +     + ++G G  GQ GHG + D+  P+  +S                
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHT 85

Query: 338 -------------------------------------LMDIQVEQIAAGLWHTVCISVEG 360
                                                L  ++++QIA G  H + ++  G
Sbjct: 86  IAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNG 145

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           +V+ +G NQ GQLG G +Q   +P+ ++    E    K+++ GA H+  +TE G +  WG
Sbjct: 146 QVHSWGRNQNGQLGLGNNQDSLLPQKIKA--FEGVCVKMIAAGAEHTTAITEGGDLYGWG 203

Query: 421 WNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           W +YG LGL D  DR++P  V  + G     +ACGW H++ ++ +
Sbjct: 204 WGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSS 248



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 9/85 (10%)

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           E VP+  E  ++      ++S GA HSA L     V SWG  + GQLG GDS DR +P++
Sbjct: 13  EAVPEAPEQSVI------LISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTV 66

Query: 441 VPIHGFLPR--NIACGWWHTLLLAE 463
           +     +PR  ++ CG  HT+  ++
Sbjct: 67  LTSFD-VPRVTSVICGADHTIAYSD 90



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)

Query: 42  IPARLCGGDSWKDV----CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
           +P +L   ++ KDV      GG    +A +E GKL  WG  +  GQ  +       +P  
Sbjct: 272 VPRKL---EALKDVPISQISGGWRHTMAVAEDGKLYGWG-WNKFGQVGVEDNVDHCSPVE 327

Query: 98  FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
              P E  +V+ A GW H +++TE   +++WG
Sbjct: 328 VNFPDEQKIVQVACGWRHTLALTENKNIFSWG 359


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 130/265 (49%), Gaps = 35/265 (13%)

Query: 211 GVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           G+ I  VAA  G  H L ++  G V+ WGY   GQLGLGS I    TP +I  L      
Sbjct: 554 GIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLRE---- 609

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                              + ++   A    HSAVV+  G LL FG    GQ G   T  
Sbjct: 610 -------------------KYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQH 650

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           Q  P    SL    + ++A GL+HT+ I+  G VY FG N +GQLG G  +   VP L++
Sbjct: 651 QHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVK 710

Query: 389 TPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
           T + ES    V VSCG  H+  ++E G++++WG N YGQLG+G    +N    VP    L
Sbjct: 711 TSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVP----L 766

Query: 448 P-----RNIACGWWHTLLLAETTQI 467
           P     +  +CG +HTL+L    ++
Sbjct: 767 PLSSKIKTASCGCYHTLILMSNGRV 791



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 6/176 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL---RPSYASSLMDIQVEQIA 347
           +++IA G    AVV   GA+ T G    GQCG+G+  +++    P  A S + I +   A
Sbjct: 504 IRDIAGGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAA 563

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH 406
            G  H + ++ +G VY +G N  GQLG G   ++ + P+++++ + E       +    H
Sbjct: 564 NGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDS-LREKYHITTAAVSYHH 622

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLL 461
           SAV++ +G++L +G N  GQLGL  +  ++ P LV  +   +   +ACG +HT+ +
Sbjct: 623 SAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAI 678



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 138/329 (41%), Gaps = 66/329 (20%)

Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
           ++V AA G  H ++V   G VY+WG+ +              G     ST  +S  P   
Sbjct: 558 NMVAAANGCEHMLAVASDGAVYSWGYND-------------RGQLGLGSTISKSHTP--- 601

Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPA---SGDEFFTL-----------------SPC 204
                 R  + + ++   ++A     + A   S  E                     +P 
Sbjct: 602 ------RMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQ 655

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           LV       IT+VA G  HT+ ++  G+V+ +G    GQLGLG                H
Sbjct: 656 LVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLG----------------H 699

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
           A + K  P LV+     S G++    V  ++CG  H+  +++ G L+T+G   YGQ G G
Sbjct: 700 ARNMK-VPTLVK----TSLGESDEKIVA-VSCGYYHTVTISEKGKLITWGRNDYGQLGIG 753

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ--AEN 382
           S + +    Y    +  +++  + G +HT+ +   GRV VFG N  GQLG G     + +
Sbjct: 754 SKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSRTLPSAD 813

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLT 411
           +P  + +  L +     ++ G   S +LT
Sbjct: 814 LPLPVPSNSLANDEVVRIAAGFYSSYILT 842



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 83/296 (28%)

Query: 66  TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
            S +G+L+ +G  +D GQ  L   +H  TP+     +   + + A G  H +++T  GEV
Sbjct: 626 VSSNGELLMFG-MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEV 684

Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
           Y++G            D+G  G        +   +PT             +VK    +S 
Sbjct: 685 YSFG----------KNDYGQLGL----GHARNMKVPT-------------LVK----TSL 713

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
            E  E                      KI  V+ G  HT+ +S+ G++  WG    GQLG
Sbjct: 714 GESDE----------------------KIVAVSCGYYHTVTISEKGKLITWGRNDYGQLG 751

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           +GS+             +H  S +  PL +             S +K  +CG  H+ ++ 
Sbjct: 752 IGSK-------------DHKNSAQYVPLPL------------SSKIKTASCGCYHTLILM 786

Query: 306 DAGALLTFGWGLYGQCGHGS----TNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
             G ++ FG    GQ G GS    + D   P  ++SL + +V +IAAG + +  ++
Sbjct: 787 SNGRVMVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILT 842



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 17/140 (12%)

Query: 41  PIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
           P   +   G+S + +    CG+   +  SE GKLITWG  +D GQ  + S  H  + +  
Sbjct: 706 PTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGR-NDYGQLGIGSKDHKNSAQYV 764

Query: 99  PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
           PLP  + +  A+ G  H + +   G V  +G            + G  G+  +       
Sbjct: 765 PLPLSSKIKTASCGCYHTLILMSNGRVMVFG----------RNNKGQLGAGSRTLPSADL 814

Query: 159 ALPTEQAPPSDKRAGEEVVK 178
            LP     PS+  A +EVV+
Sbjct: 815 PLPV----PSNSLANDEVVR 830


>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 4048

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 130/261 (49%), Gaps = 27/261 (10%)

Query: 211 GVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           G+ I+ VAA  G  H L ++  G V+ WGY   GQLGLGS I    TP +I  L      
Sbjct: 549 GIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLRE---- 604

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                              + ++   A    HSAVV+  G LLTFG    GQ G   T  
Sbjct: 605 -------------------KYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQH 645

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           Q  P    +L    V + A GL+HTV  + +G VY FG N +GQLG G  +    P L++
Sbjct: 646 QHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNIKTPALVK 705

Query: 389 TPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGF 446
           T + ES    V VSCG  H+  ++E G++++WG N YGQLG+G    +N    VP+    
Sbjct: 706 TSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSS 765

Query: 447 LPRNIACGWWHTLLLAETTQI 467
             +N +CG +H+L+L    ++
Sbjct: 766 KIKNASCGCYHSLILMSNGRV 786



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 148/386 (38%), Gaps = 84/386 (21%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
           GT  E+  I +P+ A L G          GC   LA +  G + +WG  +D GQ  L S 
Sbjct: 532 GTFEERVIIATPVRA-LSGIAISMVAAANGCEHMLAVASDGAVFSWG-YNDRGQLGLGST 589

Query: 90  -KHGETPEPF-PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
                TP     L  +  +  AA  + H   V+  GE+ T+G  +C             G
Sbjct: 590 ISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC-------------G 636

Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
               D T  Q                                  P   D    LS  +VT
Sbjct: 637 QLGLDHTQHQ--------------------------------HTPQVVD---ALSSQVVT 661

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
                   K A G  HT+  +  G+V+ +G    GQLGLG   + + TP L+        
Sbjct: 662 --------KAACGLYHTVAATSDGEVYSFGKNDYGQLGLG-HARNIKTPALVK------- 705

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
                         S G++    V  ++CG  H+  +++ G L+T+G   YGQ G GS  
Sbjct: 706 -------------TSLGESDEKIVA-VSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKE 751

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--QAENVPK 385
            +    +    M  +++  + G +H++ +   GRV VFG N  GQLG G     + ++P 
Sbjct: 752 HKNSAQFVPLPMSSKIKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGARTLSSADLPL 811

Query: 386 LLETPILESKRAKVVSCGARHSAVLT 411
            + +  L +     ++ G   S +LT
Sbjct: 812 PVPSNSLANDEVVRIAAGFYSSYILT 837



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 95/174 (54%), Gaps = 6/174 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL---RPSYASSLMDIQVEQIA 347
           ++++A G    AVV + G + T G    GQCG+G+  +++    P  A S + I +   A
Sbjct: 499 IRDVAGGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAA 558

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH 406
            G  H + ++ +G V+ +G N  GQLG G   ++ + P+++++ + E       +    H
Sbjct: 559 NGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDS-LREKYHITTAAVSYHH 617

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
           SAV++ +G++L++G N  GQLGL  +  ++ P +V  +   +    ACG +HT+
Sbjct: 618 SAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTV 671


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 174/398 (43%), Gaps = 59/398 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA------- 111
           G   ++A      L +WG  +D GQ       HG+  +   +PT  S   AAA       
Sbjct: 30  GASHSVALLAGNVLCSWGRGED-GQL-----GHGDAEDRL-VPTVLSGFDAAAPGITSVI 82

Query: 112 -GWAHCVSVTE-AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTE 163
            G  H  + +E   +VY+WGW           DFG  G       F          +  +
Sbjct: 83  CGADHTTAYSEDEQQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGIKIK 132

Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
           Q    D       +     S  R ++     G    +L P  +    GV +  +AAG  H
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEH 192

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           T  +++ G ++GWG+G  G LGLG R        L+P    +  G+   L          
Sbjct: 193 TAAVTEDGDLYGWGWGRYGNLGLGDR-----NDRLVPEKVSSVEGEKMVL---------- 237

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
                     IACG RH+  V+ +G+L T+GW  YGQ GHG   D L P    +L D  +
Sbjct: 238 ----------IACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSI 287

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
            QI+ G  HT+ ++ +G++Y +G N+FGQ+G G       P  ++ P  E ++   V+CG
Sbjct: 288 SQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFP--EDQKVAQVACG 345

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            RH+   TE   V SWG    GQLG G+ +DRN P ++
Sbjct: 346 WRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMI 383



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 133/278 (47%), Gaps = 36/278 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+     +P  V    G+KI ++A G  H L ++  G+V  WG    GQLGLG+    + 
Sbjct: 112 GNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSL- 170

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P  I   E                           VK IA G  H+A VT+ G L  +G
Sbjct: 171 LPQKIQSFEGVC------------------------VKMIAAGAEHTAAVTEDGDLYGWG 206

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG YG  G G  ND+L P   SS+   ++  IA G  HT+ +S  G +Y +G +++GQLG
Sbjct: 207 WGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLG 266

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G  +   VP  LE   L+      +S G RH+  LT DG++  WGWNK+GQ+G+GD+ D
Sbjct: 267 HGDFEDHLVPHKLEA--LKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDD 324

Query: 435 RNIPSLVPIHGFLPRN-----IACGWWHTLLLAETTQI 467
              P  V      P +     +ACGW HTL   E   +
Sbjct: 325 HCFPVQVK----FPEDQKVAQVACGWRHTLAFTEKKNV 358



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 136/259 (52%), Gaps = 29/259 (11%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAAS 267
           +P   +  V+AG  H++ L     +  WG G +GQLG G +  ++VPT  ++   + AA 
Sbjct: 19  DPPPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPT--VLSGFDAAAP 76

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGST 326
           G                      +  + CG  H +A   D   + ++GWG +G+ GHG++
Sbjct: 77  G----------------------ITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNS 114

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
           +D   P    +L  I+++QIA G  H + +++ G V  +G NQ GQLG G  +   +P+ 
Sbjct: 115 SDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQK 174

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHG 445
           +++   E    K+++ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V  + G
Sbjct: 175 IQS--FEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEG 232

Query: 446 FLPRNIACGWWHTLLLAET 464
                IACGW HT+ ++ +
Sbjct: 233 EKMVLIACGWRHTITVSSS 251



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 126/306 (41%), Gaps = 51/306 (16%)

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKD 152
           TP+P        + + A G +HC++VT AGEV +WG  +           G  G    +D
Sbjct: 119 TPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQN----------GQLGLGTTED 168

Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
           S   Q     E        AG E      T++  E+ +          N   GD    L 
Sbjct: 169 SLLPQKIQSFEGVCVKMIAAGAE-----HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV 223

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V+   G K+  +A G RHT+ +S  G ++ +G+   GQLG G     +  PH +  L
Sbjct: 224 PEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL-VPHKLEAL 282

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           +                         S + +I+ G RH+  +T  G L  +GW  +GQ G
Sbjct: 283 KD------------------------SSISQISGGWRHTMALTSDGKLYGWGWNKFGQVG 318

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            G T+D   P       D +V Q+A G  HT+  + +  V+ +G    GQLG G     N
Sbjct: 319 VGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRN 378

Query: 383 VPKLLE 388
            P +++
Sbjct: 379 KPVMID 384



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 128/336 (38%), Gaps = 60/336 (17%)

Query: 19  ETVVYMWGYLP------GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
           E  VY WG+        G S   S + +P P +   G   K +  G     LA + +G++
Sbjct: 95  EQQVYSWGWGDFGRLGHGNS---SDVFTPQPVKALQGIKIKQIACGDS-HCLAVTMAGEV 150

Query: 73  ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
            +WG  +  GQ  L + +    P+         V   AAG  H  +VTE G++Y WGW  
Sbjct: 151 QSWGR-NQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGR 209

Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-- 190
                     +G+ G   ++       +P + +    ++        R T +        
Sbjct: 210 ----------YGNLGLGDRN----DRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGSLY 255

Query: 191 --------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                       GD    L P  +       I++++ G RHT+ L+  G+++GWG+   G
Sbjct: 256 TYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFG 315

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           Q+G+G         H  P        +                     V ++ACG RH+ 
Sbjct: 316 QVGVGDT-----DDHCFPVQVKFPEDQK--------------------VAQVACGWRHTL 350

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             T+   + ++G G  GQ GHG   D+ +P    +L
Sbjct: 351 AFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDAL 386



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-----RNIAC 453
           +VS GA HS  L     + SWG  + GQLG GD+ DR +P++  + GF        ++ C
Sbjct: 26  LVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTV--LSGFDAAAPGITSVIC 83

Query: 454 GWWHTLLLAETTQ 466
           G  HT   +E  Q
Sbjct: 84  GADHTTAYSEDEQ 96


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 178/396 (44%), Gaps = 57/396 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA------AAG 112
           G    +A      + +WG  +D GQ       HG+T +   LPT  S + A      A G
Sbjct: 21  GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTHLSALDAQQIDSIACG 73

Query: 113 WAHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
             H ++ +E+  E+Y+WGW           DFG  G                  L  +Q 
Sbjct: 74  ADHTLAYSESRNELYSWGWG----------DFGRLGHGNSSDLLIPQPIIALQGLRIKQI 123

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
              D       ++    S  R ++     G    +L P  +    GV I  VAAG  H++
Sbjct: 124 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSV 183

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            +++ G+++GWG+G  G LGLG R                    DR +  +  SV+    
Sbjct: 184 AITENGELYGWGWGRYGNLGLGDR-------------------NDRWIPEKVSSVDCD-- 222

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
                +  +ACG RH+  V+  G L T+GW  YGQ GHG+  D L P    +L D  + Q
Sbjct: 223 ----KMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQ 278

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           ++ G  H++ ++  G +Y +G N+FGQ+G G +     P  ++ P    ++   +SCG R
Sbjct: 279 VSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFP--HDQKVVQISCGWR 336

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           H+  +TE   V SWG    GQLG GD++DRN P ++
Sbjct: 337 HTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKII 372



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 101/225 (44%), Gaps = 56/225 (24%)

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           S V  I+ G  H+  +     + ++G G  GQ GHG T+D+L P++ S+L   Q++ IA 
Sbjct: 13  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIAC 72

Query: 349 GLWHT-----------------------------------------------------VC 355
           G  HT                                                     + 
Sbjct: 73  GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLA 132

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           +++EG V  +G NQ GQLG G  +   VP+ ++T   +    K+V+ GA HS  +TE+G+
Sbjct: 133 VTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQT--FQGVPIKMVAAGAEHSVAITENGE 190

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
           +  WGW +YG LGLGD  DR IP  V  +       +ACGW HT+
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTI 235



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 121/320 (37%), Gaps = 61/320 (19%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
             S +L P P     G   K +  G     LA +  G++ +WG  +  GQ  L + +   
Sbjct: 102 NSSDLLIPQPIIALQGLRIKQIACGDS-HCLAVTMEGEVQSWGR-NQNGQLGLGTSEDSL 159

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
            P+         +   AAG  H V++TE GE+Y WGW            +G+ G   ++ 
Sbjct: 160 VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGR----------YGNLGLGDRN- 208

Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLSP 203
                 +P + +     +        R T S             +      G+   +L P
Sbjct: 209 ---DRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVP 265

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-----MVPTPHL 258
             +       I++V+ G RH++ L+  G ++GWG+   GQ+G+G  +       V  PH 
Sbjct: 266 QKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPH- 324

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
                                           V +I+CG RH+  VT+   + ++G G  
Sbjct: 325 -----------------------------DQKVVQISCGWRHTIAVTEKENVFSWGRGTN 355

Query: 319 GQCGHGSTNDQLRPSYASSL 338
           GQ GHG T D+  P    +L
Sbjct: 356 GQLGHGDTVDRNSPKIIEAL 375



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 37/273 (13%)

Query: 33  PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
           P+K      +P ++            G   ++A +E+G+L  WG     G   L      
Sbjct: 161 PQKIQTFQGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 210

Query: 93  ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
             PE         +V  A GW H +SV+  G +YT+GW +          +G  G     
Sbjct: 211 WIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSK----------YGQLGH---- 256

Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLS 202
              + S +P +    SDK   +     R + +             +      GD     S
Sbjct: 257 GNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS 316

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V      K+ +++ G RHT+ +++   V+ WG G  GQLG G  +    +P +I  L
Sbjct: 317 PVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDR-NSPKIIEAL 375

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
             +  G   P +    +   SGK+G S  +  A
Sbjct: 376 --SVDGSSGPHIESSNTDLLSGKSGASLFERYA 406


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 178/396 (44%), Gaps = 57/396 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA------AAG 112
           G    +A      + +WG  +D GQ       HG+T +   LPT  S + A      A G
Sbjct: 21  GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTHLSALDAQQIDSIACG 73

Query: 113 WAHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
             H ++ +E+  E+Y+WGW           DFG  G                  L  +Q 
Sbjct: 74  ADHTLAYSESRNELYSWGWG----------DFGRLGHGNSSDLLIPQPIIALQGLRIKQI 123

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
              D       ++    S  R ++     G    +L P  +    GV I  VAAG  H++
Sbjct: 124 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSV 183

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            +++ G+++GWG+G  G LGLG R                    DR +  +  SV+    
Sbjct: 184 AITENGELYGWGWGRYGNLGLGDR-------------------NDRWIPEKVSSVDCD-- 222

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
                +  +ACG RH+  V+  G L T+GW  YGQ GHG+  D L P    +L D  + Q
Sbjct: 223 ----KMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQ 278

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           ++ G  H++ ++  G +Y +G N+FGQ+G G +     P  ++ P    ++   +SCG R
Sbjct: 279 VSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFP--HDQKVVQISCGWR 336

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           H+  +TE   V SWG    GQLG GD++DRN P ++
Sbjct: 337 HTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKII 372



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 101/225 (44%), Gaps = 56/225 (24%)

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           S V  I+ G  H+  +     + ++G G  GQ GHG T+D+L P++ S+L   Q++ IA 
Sbjct: 13  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIAC 72

Query: 349 GLWHT-----------------------------------------------------VC 355
           G  HT                                                     + 
Sbjct: 73  GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLA 132

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           +++EG V  +G NQ GQLG G  +   VP+ ++T   +    K+V+ GA HS  +TE+G+
Sbjct: 133 VTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQT--FQGVPIKMVAAGAEHSVAITENGE 190

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
           +  WGW +YG LGLGD  DR IP  V  +       +ACGW HT+
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTI 235



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 121/318 (38%), Gaps = 61/318 (19%)

Query: 36  SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
           S +L P P     G   K +  G     LA +  G++ +WG  +  GQ  L + +    P
Sbjct: 104 SDLLIPQPIIALQGLRIKQIACGDS-HCLAVTMEGEVQSWGR-NQNGQLGLGTSEDSLVP 161

Query: 96  EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
           +         +   AAG  H V++TE GE+Y WGW            +G+ G   ++   
Sbjct: 162 QKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGR----------YGNLGLGDRN--- 208

Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLSPCL 205
               +P + +     +        R T S             +      G+   +L P  
Sbjct: 209 -DRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQK 267

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-----MVPTPHLIP 260
           +       I++V+ G RH++ L+  G ++GWG+   GQ+G+G  +       V  PH   
Sbjct: 268 LQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPH--- 324

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                                         V +I+CG RH+  VT+   + ++G G  GQ
Sbjct: 325 ---------------------------DQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQ 357

Query: 321 CGHGSTNDQLRPSYASSL 338
            GHG T D+  P    +L
Sbjct: 358 LGHGDTVDRNSPKIIEAL 375



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 37/273 (13%)

Query: 33  PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
           P+K      +P ++            G   ++A +E+G+L  WG     G   L      
Sbjct: 161 PQKIQTFQGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 210

Query: 93  ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
             PE         +V  A GW H +SV+  G +YT+GW +          +G  G     
Sbjct: 211 WIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSK----------YGQLGH---- 256

Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLS 202
              + S +P +    SDK   +     R + +             +      GD     S
Sbjct: 257 GNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS 316

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V      K+ +++ G RHT+ +++   V+ WG G  GQLG G  +    +P +I  L
Sbjct: 317 PVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDR-NSPKIIEAL 375

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
             +  G   P +    +   SGK+G S  +  A
Sbjct: 376 --SVDGSSGPHIESSNTDLLSGKSGASLSERYA 406


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 172/395 (43%), Gaps = 55/395 (13%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
           G   ++A      L TWG  +D GQ  L  G   +   P     F  P   SV+    G 
Sbjct: 22  GASHSVALLAGNVLCTWGRGED-GQ--LGHGDAEDRLVPTVISGFDAPGITSVI---CGA 75

Query: 114 AHCVSVTE-AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAP 166
            H  + +E   +VY+WGW           DFG  G       F          +  +Q  
Sbjct: 76  DHTTAYSEDEHQVYSWGWG----------DFGRLGHGNSTDVFTPQPVKALQGIKIKQLA 125

Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
             D       +     S  R ++     G    +L P  +    G+ +  +AAG  HT  
Sbjct: 126 CGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAA 185

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           +++ G ++GWG+G  G LGLG R      P  +  +E      D+ +LV           
Sbjct: 186 VTEDGDIYGWGWGRYGNLGLGDRNDRF-VPEKVSSVE-----GDKMVLV----------- 228

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
                   ACG RH+  V+ +G+L T+GW  YGQ GHG   D L P    +L D    QI
Sbjct: 229 --------ACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQI 280

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           + G  HT+ ++ +G++Y +G N+FGQ+G G +     P  +  P  E ++   V+CG RH
Sbjct: 281 SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFP--EEQKVAQVACGWRH 338

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           +   TE   V +WG    GQLG G+ +DRN P ++
Sbjct: 339 TLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVII 373



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 132/278 (47%), Gaps = 36/278 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+     +P  V    G+KI ++A G  H L ++  G+V  WG    GQLGLG+    + 
Sbjct: 102 GNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSL- 160

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P  I   E  +                        VK IA G  H+A VT+ G +  +G
Sbjct: 161 LPQTIQAFEGIS------------------------VKMIAAGAEHTAAVTEDGDIYGWG 196

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG YG  G G  ND+  P   SS+   ++  +A G  HT+ +S  G +Y +G +++GQLG
Sbjct: 197 WGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLG 256

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G  +   VP  +E   L+      +S G RH+  LT DG++  WGWNK+GQ+G GD+ D
Sbjct: 257 HGDFEDHLVPHKVEA--LKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNAD 314

Query: 435 RNIPSLVPIHGFLPR-----NIACGWWHTLLLAETTQI 467
              P+ V      P       +ACGW HTL   E   +
Sbjct: 315 HCSPAQVN----FPEEQKVAQVACGWRHTLAFTEKKNV 348



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 130/254 (51%), Gaps = 31/254 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRP 272
           +  V+AG  H++ L     +  WG G +GQLG G +  ++VPT           SG D P
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPT---------VISGFDAP 66

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                             +  + CG  H +A   D   + ++GWG +G+ GHG++ D   
Sbjct: 67  -----------------GITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFT 109

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P    +L  I+++Q+A G  H + +++ G V  +G NQ GQLG G  +   +P+ ++   
Sbjct: 110 PQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQA-- 167

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRN 450
            E    K+++ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V  + G     
Sbjct: 168 FEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVL 227

Query: 451 IACGWWHTLLLAET 464
           +ACGW HT+ ++ +
Sbjct: 228 VACGWRHTITVSSS 241



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 127/306 (41%), Gaps = 51/306 (16%)

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKD 152
           TP+P        + + A G +HC++VT AGEV +WG  +           G  G    +D
Sbjct: 109 TPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQN----------GQLGLGTTED 158

Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
           S   Q+    E        AG E      T++  E+ +          N   GD      
Sbjct: 159 SLLPQTIQAFEGISVKMIAAGAE-----HTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV 213

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V+   G K+  VA G RHT+ +S  G ++ +G+   GQLG G     +  PH +  L
Sbjct: 214 PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL-VPHKVEAL 272

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           + +++                         +I+ G RH+  +T  G L  +GW  +GQ G
Sbjct: 273 KDSST------------------------SQISGGWRHTMALTSDGKLYGWGWNKFGQVG 308

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            G   D   P+  +   + +V Q+A G  HT+  + +  V+ +G    GQLG G     N
Sbjct: 309 AGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRN 368

Query: 383 VPKLLE 388
            P +++
Sbjct: 369 TPVIID 374



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 127/336 (37%), Gaps = 60/336 (17%)

Query: 19  ETVVYMWGYLP------GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
           E  VY WG+        G S +   + +P P +   G   K +  G     LA + +G++
Sbjct: 85  EHQVYSWGWGDFGRLGHGNSTD---VFTPQPVKALQGIKIKQLACGDS-HCLAVTMAGEV 140

Query: 73  ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
           ++WG  +  GQ  L + +    P+        SV   AAG  H  +VTE G++Y WGW  
Sbjct: 141 LSWGR-NQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGR 199

Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-- 190
                     +G+ G   ++       +P + +     +        R T +        
Sbjct: 200 ----------YGNLGLGDRN----DRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLY 245

Query: 191 --------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                       GD    L P  V        ++++ G RHT+ L+  G+++GWG+   G
Sbjct: 246 TYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFG 305

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           Q+G G         H  P                   VN   +     V ++ACG RH+ 
Sbjct: 306 QVGAGDN-----ADHCSPA-----------------QVNFPEE---QKVAQVACGWRHTL 340

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             T+   +  +G G  GQ GHG   D+  P    +L
Sbjct: 341 AFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 376


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 181/396 (45%), Gaps = 58/396 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAG 112
           G   ++A      + +WG  +D GQ       HG+T +    PT+ S      ++    G
Sbjct: 22  GASHSVALLSGNVVCSWGRGED-GQL-----GHGDTDDRL-FPTKLSALDGQDIICVTCG 74

Query: 113 WAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
             H ++ +E+G +VY+WGW           DFG  G                  L  +Q 
Sbjct: 75  ADHTMARSESGRDVYSWGW----------GDFGRLGHGDHSDLLIPHPIKALQGLMIQQI 124

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
              D       +  +  S  R ++     G    +L P  + +   + I  VAAG  H++
Sbjct: 125 ACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSV 184

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            ++  G ++GWG+G  G LGLG R                    DR LL  + +V+    
Sbjct: 185 AITKDGNLYGWGWGRYGNLGLGDR-------------------NDR-LLPEKVTVDGDKM 224

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
           A       +ACG RH+  V+ +G L T GWG YGQ GHG   D L P    +L D  + Q
Sbjct: 225 A------MVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQALSDKFISQ 278

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           ++ G  H++ ++  G++  +G N+FGQ+G G +     P  +  P    ++ +++SCG R
Sbjct: 279 VSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFP--HDQKVQMISCGWR 336

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           H+  +TE   V SWG    GQLG G++IDRN+P+++
Sbjct: 337 HTIAVTERENVYSWGRGANGQLGNGETIDRNVPTII 372



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 145/312 (46%), Gaps = 34/312 (10%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ-VWGWGYGGEGQL 244
           R E      GD    L P  ++   G  I  V  G  HT+  S+ G+ V+ WG+G  G+L
Sbjct: 40  RGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRL 99

Query: 245 GLGSRIKMVPTPHLIPCLE-----HAASGKDRPLLVRQGSV------NSSGKAGRSY--- 290
           G G    ++  PH I  L+       A G    L V   S       N +G+ G      
Sbjct: 100 GHGDHSDLL-IPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAED 158

Query: 291 --------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         +K +A G  HS  +T  G L  +GWG YG  G G  ND+L P   +
Sbjct: 159 SLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVT 218

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
              D ++  +A G  HT+C+S  G +Y  G  ++GQLG G  +   VP+ ++   L  K 
Sbjct: 219 VDGD-KMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQA--LSDKF 275

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGW 455
              VS G RHS  LT  GQ+L WGWNK+GQ+G+G++ D   P  V   H    + I+CGW
Sbjct: 276 ISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGW 335

Query: 456 WHTLLLAETTQI 467
            HT+ + E   +
Sbjct: 336 RHTIAVTERENV 347



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 28/256 (10%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  ++  V+AG  H++ L     V  WG G +GQLG G          L P    A  G+
Sbjct: 12  PPRRVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGD-----TDDRLFPTKLSALDGQ 66

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
           D                    +  + CG  H+   +++G  + ++GWG +G+ GHG  +D
Sbjct: 67  D--------------------IICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSD 106

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            L P    +L  + ++QIA G  H + ++++ +V  +G NQ G+LG G  +   +P+ ++
Sbjct: 107 LLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQ 166

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
             I E    K+V+ GA HS  +T+DG +  WGW +YG LGLGD  DR +P  V + G   
Sbjct: 167 --IFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKM 224

Query: 449 RNIACGWWHTLLLAET 464
             +ACGW HT+ ++ +
Sbjct: 225 AMVACGWRHTICVSSS 240



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 153/356 (42%), Gaps = 47/356 (13%)

Query: 42  IPARLCGGDSWKDVC-GGGCGFALATSESGK-LITWGSADDEGQSYLTSGKHGETPEPFP 99
            P +L   D    +C   G    +A SESG+ + +WG  D      L  G H +   P P
Sbjct: 56  FPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGD---FGRLGHGDHSDLLIPHP 112

Query: 100 LPTEASVV--KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
           +     ++  + A G +HC++VT   +V +WG  +           G+A    +DS   Q
Sbjct: 113 IKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQ-----NGELGLGTA----EDSLLPQ 163

Query: 158 SALPTEQAPPSDKRAG-EEVVKRRKTSSARE----ESENPASGDEFFTLSPCLVTLNPGV 212
                E+ P     AG E  V   K  +          N   GD    L P  VT++ G 
Sbjct: 164 KIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVD-GD 222

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           K+  VA G RHT+ +S  G ++  G+G  GQLG G         HL+P    A S K   
Sbjct: 223 KMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDF-----EDHLVPRKVQALSDK--- 274

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                            ++ +++ G RHS  +T +G LL +GW  +GQ G G+  D   P
Sbjct: 275 -----------------FISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSP 317

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              +   D +V+ I+ G  HT+ ++    VY +G    GQLG G     NVP ++E
Sbjct: 318 MQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIE 373



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 128/334 (38%), Gaps = 63/334 (18%)

Query: 22  VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
           VY WG   +      + S +L P P +   G   + +  G     LA +   ++++WG  
Sbjct: 88  VYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDS-HCLAVTMDSQVLSWGR- 145

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           +  G+  L + +    P+   +  E  +   AAG  H V++T+ G +Y WGW        
Sbjct: 146 NQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGR------ 199

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE---------ES 189
               +G+ G   ++       LP +     DK A      R     +           + 
Sbjct: 200 ----YGNLGLGDRND----RLLPEKVTVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKY 251

Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
                GD    L P  V       I++V+ G RH++ L+  GQ+ GWG+   GQ+G+G+ 
Sbjct: 252 GQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNN 311

Query: 250 IK-----MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
                   V  PH                                 V+ I+CG RH+  V
Sbjct: 312 FDCCSPMQVNFPH------------------------------DQKVQMISCGWRHTIAV 341

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
           T+   + ++G G  GQ G+G T D+  P+   + 
Sbjct: 342 TERENVYSWGRGANGQLGNGETIDRNVPTIIEAF 375


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 176/413 (42%), Gaps = 90/413 (21%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   +LA   +G  ++WG  +D GQ      +  + P       +AS     +G  + V+
Sbjct: 22  GSSHSLALLSNGIALSWGRGED-GQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYSVA 80

Query: 119 VTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
           +++   EVY+WGW           DFG  G                              
Sbjct: 81  LSQPRNEVYSWGWG----------DFGRLGH----------------------------- 101

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
                            GD      P  +    G  I KVA G  HTL ++D G+++ +G
Sbjct: 102 -----------------GDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFG 144

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
               GQLGLG+    +     +P    +  G++                    V  IACG
Sbjct: 145 RNQNGQLGLGTTSDAI-----LPQPVESLRGQE--------------------VTSIACG 179

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           G HS   T AG +  +GWG YG  G G   D+  PS    L  ++V  +A G  H++   
Sbjct: 180 GEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAAD 239

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
             G VY FG +++GQLG G    + VPK +E+  L+  R  +++ G RH++   + G++ 
Sbjct: 240 ETGAVYTFGWSKYGQLGHGDCIDQLVPKAVES--LKDSRIVLIAGGWRHTSAADDSGKLY 297

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP---RNIACGWWHTLLLAETTQI 467
           SWGWNK+GQLG+G + D N P  VP+ G      + ++CGW HT  + E   +
Sbjct: 298 SWGWNKFGQLGIGSNTDSNAP--VPVQGLNTSPVKLLSCGWRHTFAVTEAGDV 348



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 291 VKEIACGGRHSAVVTDAGALL--------------------------------------- 311
           V  ++CG  HS  +   G  L                                       
Sbjct: 16  VTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGA 75

Query: 312 --------------TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
                         ++GWG +G+ GHG  ND   P    +L    + ++A G  HT+ ++
Sbjct: 76  EYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVT 135

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
             G ++ FG NQ GQLG G      +P+ +E+  L  +    ++CG  HS   T  G V 
Sbjct: 136 DTGELFSFGRNQNGQLGLGTTSDAILPQPVES--LRGQEVTSIACGGEHSLAATSAGDVF 193

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           +WGW +YG LG+G   DR++PS V  + G    ++ACGW H++   ET  +
Sbjct: 194 AWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAV 244



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 134/352 (38%), Gaps = 87/352 (24%)

Query: 38  ILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
           +  P P R   G   +++    CG    LA +++G+L ++G  +  GQ  L +      P
Sbjct: 107 VFIPQPIRALAG---RNIVKVACGDTHTLAVTDTGELFSFGR-NQNGQLGLGTTSDAILP 162

Query: 96  EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
           +P        V   A G  H ++ T AG+V+ WGW            +G+ G        
Sbjct: 163 QPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGR----------YGNLGV------- 205

Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
                     PP D+                                P  V    GVK+T
Sbjct: 206 ---------GPPEDRHL------------------------------PSQVHGLEGVKVT 226

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            VA G RH++   + G V+ +G+   GQLG G  I  +  P  +  L      KD  +++
Sbjct: 227 SVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQL-VPKAVESL------KDSRIVL 279

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                             IA G RH++   D+G L ++GW  +GQ G GS  D   P   
Sbjct: 280 ------------------IAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVPV 321

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
             L    V+ ++ G  HT  ++  G V+ +G    GQLG    +  N P  L
Sbjct: 322 QGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRL 373



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 8/139 (5%)

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
           ++ S++ D++V  ++ G  H++ +   G    +G  + GQLG G  +    P+ +    L
Sbjct: 6   TFRSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFH--L 63

Query: 393 ESKRAKVVSCGARHSAVLTE-DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
                  V  GA +S  L++   +V SWGW  +G+LG GD  D  IP   PI     RNI
Sbjct: 64  MQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQ--PIRALAGRNI 121

Query: 452 ---ACGWWHTLLLAETTQI 467
              ACG  HTL + +T ++
Sbjct: 122 VKVACGDTHTLAVTDTGEL 140



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 10/132 (7%)

Query: 50  DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
           DS   +  GG     A  +SGKL +WG  +  GQ  + S      P P      + V   
Sbjct: 274 DSRIVLIAGGWRHTSAADDSGKLYSWG-WNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLL 332

Query: 110 AAGWAHCVSVTEAGEVYTWGW---------RECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
           + GW H  +VTEAG+V++WG               +A V     S GS + +  G  ++ 
Sbjct: 333 SCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIKLEDLGVSASP 392

Query: 161 PTEQAPPSDKRA 172
            T   PP+D+ A
Sbjct: 393 LTTYVPPADRYA 404


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 171/390 (43%), Gaps = 45/390 (11%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   ++A      + +WG  +D GQ      +   +P          +V    G  H  +
Sbjct: 16  GASHSVALLSGNIVCSWGRGED-GQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTA 74

Query: 119 VTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQAPPSDKR 171
            + A  EVY+WGW           DFG  G                  L   Q    D  
Sbjct: 75  YSVARTEVYSWGWG----------DFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSH 124

Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
                ++    S  R ++     G    +L P  +    G+ I  VAAG  HT  +++ G
Sbjct: 125 CLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDG 184

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           +++GWG+G  G LGLG R        L+P    +  G D+ ++V                
Sbjct: 185 ELFGWGWGRYGNLGLGDR-----NDRLVPQKVSSVDG-DKMVMV---------------- 222

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
              ACG RH+  V+  G L T+GW  YGQ GHG   D+L P    +L    + QI+ G  
Sbjct: 223 ---ACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWR 279

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           HT+ ++ +G++Y +G N+FGQ+G G +     P  ++ P  + ++   +SCG RH+  +T
Sbjct: 280 HTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFP--QDQKVIQISCGWRHTLAVT 337

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           +   V SWG    GQLG G+S+DRN P ++
Sbjct: 338 DKQNVFSWGRGTNGQLGHGESVDRNTPMIL 367



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 136/278 (48%), Gaps = 36/278 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+    L+P  +    G+KI ++A G  H L ++  G+V  WG    GQLGLG+    + 
Sbjct: 96  GNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSL- 154

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P  I   E  +                        +K +A G  H+A VT+ G L  +G
Sbjct: 155 VPQKIQAFEGIS------------------------IKMVAAGAEHTAAVTEDGELFGWG 190

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG YG  G G  ND+L P   SS+   ++  +A G  HT+ +S  G +Y +G +++GQLG
Sbjct: 191 WGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLG 250

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G  +   VP  LE   L       +S G RH+  LT DG++  WGWNK+GQ+G GD+ID
Sbjct: 251 HGDFEDRLVPHRLEA--LRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNID 308

Query: 435 RNIPSLVPIHGFLPRN-----IACGWWHTLLLAETTQI 467
                  PI    P++     I+CGW HTL + +   +
Sbjct: 309 H----CSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNV 342



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 128/253 (50%), Gaps = 29/253 (11%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           +P  ++  ++AG  H++ L     V  WG G +GQLG G          L P    A  G
Sbjct: 5   SPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGD-----AEDRLSPTQLSALDG 59

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTN 327
            +                    +  + CG  H+   + A   + ++GWG +G+ GHG+++
Sbjct: 60  HE--------------------IVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSS 99

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    +L  +++ QIA G  H + +++EG V  +G NQ GQLG G  +   VP+ +
Sbjct: 100 DLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKI 159

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGF 446
           +    E    K+V+ GA H+A +TEDG++  WGW +YG LGLGD  DR +P  V  + G 
Sbjct: 160 QA--FEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGD 217

Query: 447 LPRNIACGWWHTL 459
               +ACGW HT+
Sbjct: 218 KMVMVACGWRHTI 230



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 124/306 (40%), Gaps = 51/306 (16%)

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKD 152
           TP+P        + + A G +HC++VT  GEV +WG  +           G  G    +D
Sbjct: 103 TPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQN----------GQLGLGTTED 152

Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
           S   Q     E        AG E      T++  E+ E          N   GD    L 
Sbjct: 153 SLVPQKIQAFEGISIKMVAAGAE-----HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLV 207

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V+   G K+  VA G RHT+ +S +G ++ +G+   GQLG G          L+P  
Sbjct: 208 PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF-----EDRLVPHR 262

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
             A  G +                    + +I+ G RH+  +T  G L  +GW  +GQ G
Sbjct: 263 LEALRGDN--------------------ISQISGGWRHTMALTTDGKLYGWGWNKFGQVG 302

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            G   D   P       D +V QI+ G  HT+ ++ +  V+ +G    GQLG G     N
Sbjct: 303 AGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRN 362

Query: 383 VPKLLE 388
            P +LE
Sbjct: 363 TPMILE 368



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 132/334 (39%), Gaps = 56/334 (16%)

Query: 19  ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
            T VY WG   +        S +L+P P +   G   + +  G     LA +  G++ +W
Sbjct: 79  RTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDS-HCLAVTMEGEVQSW 137

Query: 76  GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
           G  +  GQ  L + +    P+        S+   AAG  H  +VTE GE++ WGW     
Sbjct: 138 GR-NQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGR--- 193

Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE-------- 187
                  +G+ G   ++       +P + +     +        R T S           
Sbjct: 194 -------YGNLGLGDRND----RLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYG 242

Query: 188 --ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
             +      GD    L P  +    G  I++++ G RHT+ L+  G+++GWG+   GQ+G
Sbjct: 243 WSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVG 302

Query: 246 LGSRIKMV-PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
            G  I    P     P        +D+ ++                  +I+CG RH+  V
Sbjct: 303 AGDNIDHCSPIQIKFP--------QDQKVI------------------QISCGWRHTLAV 336

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
           TD   + ++G G  GQ GHG + D+  P    +L
Sbjct: 337 TDKQNVFSWGRGTNGQLGHGESVDRNTPMILEAL 370


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 138/274 (50%), Gaps = 30/274 (10%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G + FT  P  +    G++I ++A G  H L ++  G+V  WG    GQLGLG+      
Sbjct: 94  GCDLFTPQP--IKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-----T 146

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
              L+P    A  G                      VK +A G  H+A VT+ G L  +G
Sbjct: 147 EDSLVPQKIQAFQGVS--------------------VKMVAAGAEHTAAVTEDGELYGWG 186

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG YG  G G  ND+L P   S++  +++ ++A G  HT+ +S  G +Y +G +++GQLG
Sbjct: 187 WGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLG 246

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G  +    P  LE   L+      +S G RH+  LT DG++  WGWNK+GQ+G+GD++D
Sbjct: 247 HGDFEDHLTPHKLEA--LQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVD 304

Query: 435 RNIPSLVPI-HGFLPRNIACGWWHTLLLAETTQI 467
              P  V   H     +I+CGW HTL + E   +
Sbjct: 305 HCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNV 338



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 169/386 (43%), Gaps = 45/386 (11%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   ++A      + +WG  +D GQ      +   +P          VV    G  H  +
Sbjct: 24  GASHSVALLXGNVVCSWGRGED-GQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTA 82

Query: 119 VTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
            +E+  +VY+WG                   F          L  +Q    D       +
Sbjct: 83  YSESFTQVYSWG----------------CDLFTPQPIKALHGLRIKQIACGDSHCLAVTM 126

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
                S  R ++     G    +L P  +    GV +  VAAG  HT  +++ G+++GWG
Sbjct: 127 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWG 186

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
           +G  G LGLG R   +  P  +  +E                       G   VK +ACG
Sbjct: 187 WGRYGNLGLGDRNDRL-VPEKVSTVE-----------------------GVKMVK-VACG 221

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
            RH+  V+ +G L T+GW  YGQ GHG   D L P    +L +  + +I+ G  HT+ ++
Sbjct: 222 WRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALT 281

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
            +G++Y +G N+FGQ+G G +     P  ++ P    ++   +SCG RH+  +TE   V 
Sbjct: 282 SDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFP--HEQKVVHISCGWRHTLAVTERQNVF 339

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPI 443
           SWG    GQLG G+SIDRNIP ++ +
Sbjct: 340 SWGRGTNGQLGHGESIDRNIPKMIEV 365



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 39/256 (15%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P  ++  ++AG  H++ L     V  WG G +GQLG G          L P    A  G 
Sbjct: 14  PVRRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGD-----AEDRLSPTYLSALDGH 68

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
           +                    V  + CG  H+   +++   + + WG           D 
Sbjct: 69  E--------------------VVSVTCGADHTTAYSESFTQV-YSWGC----------DL 97

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
             P    +L  ++++QIA G  H + ++++G V  +G NQ GQLG G  +   VP+ ++ 
Sbjct: 98  FTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQA 157

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
              +    K+V+ GA H+A +TEDG++  WGW +YG LGLGD  DR +P  V  + G   
Sbjct: 158 --FQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKM 215

Query: 449 RNIACGWWHTLLLAET 464
             +ACGW HT+ ++ +
Sbjct: 216 VKVACGWRHTISVSSS 231



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 16/176 (9%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           I+ G  HS  +     + ++G G  GQ GHG   D+L P+Y S+L   +V  +  G  HT
Sbjct: 21  ISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHT 80

Query: 354 VCISVE-GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
              S    +VY +G + F             P+ ++   L   R K ++CG  H   +T 
Sbjct: 81  TAYSESFTQVYSWGCDLF------------TPQPIKA--LHGLRIKQIACGDSHCLAVTM 126

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           DG+V SWG N+ GQLGLG + D  +P  +    G   + +A G  HT  + E  ++
Sbjct: 127 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGEL 182



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIAC 453
           +R  ++S GA HS  L     V SWG  + GQLG GD+ DR  P+ L  + G    ++ C
Sbjct: 16  RRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTC 75

Query: 454 GWWHTLLLAET-TQI 467
           G  HT   +E+ TQ+
Sbjct: 76  GADHTTAYSESFTQV 90



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           GG    +A +  GKL  WG  +  GQ  +       +P     P E  VV  + GW H +
Sbjct: 272 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTL 330

Query: 118 SVTEAGEVYTWG 129
           +VTE   V++WG
Sbjct: 331 AVTERQNVFSWG 342


>gi|255074379|ref|XP_002500864.1| predicted protein [Micromonas sp. RCC299]
 gi|226516127|gb|ACO62122.1| predicted protein [Micromonas sp. RCC299]
          Length = 265

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/263 (36%), Positives = 130/263 (49%), Gaps = 42/263 (15%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  VAAG RH+L LS  G V+ WG    GQLGLG      P P  +P     + G+D 
Sbjct: 32  IDVVAVAAGERHSLALSAKGTVFAWGDNHTGQLGLGGED---PLPMDVPT---TSLGRDV 85

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            ++                   +A G RHS +V+  G + T GWGLYGQ GH    D   
Sbjct: 86  VIV------------------GVAAGARHSVMVSATGDVFTVGWGLYGQLGHEDAEDLFA 127

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P     L  I V  +AAG  HT C++ +G +Y +G N+ G+LGT      +V K  E+  
Sbjct: 128 PRRVEHLAGITVVSVAAGSAHTACVTRDGALYAWGSNRKGELGTATG---DVTKARESND 184

Query: 392 LESKRAKVVSCGARHSAVLT--EDGQ--VLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
                A  V+CG+ H+  L   E G+  +  +GWN  GQLGLGD  DR IP+ +P    L
Sbjct: 185 GAGSLAVAVACGSSHTVALARLESGEAGLFGFGWNNMGQLGLGDDKDRGIPARIP----L 240

Query: 448 PRN-------IACGWWHTLLLAE 463
           P N       + CGWWHT++  E
Sbjct: 241 PANEKGKVTKLRCGWWHTVVGVE 263



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 93/223 (41%), Gaps = 30/223 (13%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G++   +     +L   V I  VAAG RH++++S  G V+  G+G  GQLG      +  
Sbjct: 68  GEDPLPMDVPTTSLGRDVVIVGVAAGARHSVMVSATGDVFTVGWGLYGQLGHEDAEDLF- 126

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P  +   EH A                        V  +A G  H+A VT  GAL  +G
Sbjct: 127 APRRV---EHLAG---------------------ITVVSVAAGSAHTACVTRDGALYAWG 162

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI----SVEGRVYVFGGNQF 370
               G+ G  +T D  +   ++         +A G  HTV +    S E  ++ FG N  
Sbjct: 163 SNRKGELGT-ATGDVTKARESNDGAGSLAVAVACGSSHTVALARLESGEAGLFGFGWNNM 221

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           GQLG G D+   +P  +  P  E  +   + CG  H+ V  E+
Sbjct: 222 GQLGLGDDKDRGIPARIPLPANEKGKVTKLRCGWWHTVVGVEE 264



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 87/236 (36%), Gaps = 54/236 (22%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-----EASVVKAAAGWAHCV 117
           +LA S  G +  WG  +  GQ     G  GE P P  +PT     +  +V  AAG  H V
Sbjct: 44  SLALSAKGTVFAWGD-NHTGQL----GLGGEDPLPMDVPTTSLGRDVVIVGVAAGARHSV 98

Query: 118 SVTEAGEVYTWGW-----------------RECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
            V+  G+V+T GW                 R     A +T    +AGS       +  AL
Sbjct: 99  MVSATGDVFTVGWGLYGQLGHEDAEDLFAPRRVEHLAGITVVSVAAGSAHTACVTRDGAL 158

Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                     R GE        + ARE ++   S                      VA G
Sbjct: 159 YAW----GSNRKGELGTATGDVTKARESNDGAGS------------------LAVAVACG 196

Query: 221 GRHTLILSDM----GQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDR 271
             HT+ L+ +      ++G+G+   GQLGLG  + + +P    +P  E     K R
Sbjct: 197 SSHTVALARLESGEAGLFGFGWNNMGQLGLGDDKDRGIPARIPLPANEKGKVTKLR 252


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 131/273 (47%), Gaps = 28/273 (10%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           +    L P     +  VK    + G  H + L+D G  + WGY   GQLG  +    +  
Sbjct: 400 ERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHV 459

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
           P LI  L      KD+ L          G A  SY         HSAV+TDAG L TFG 
Sbjct: 460 PKLIESL------KDKKL----------GFASVSY--------HHSAVITDAGELYTFGM 495

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
              GQ G   T  Q  P    SL   +V  +A GL+HT+  +  G ++  G N +GQLG 
Sbjct: 496 NDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGL 555

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
             ++   +P L+  P   ++    V+CG  HS V++  G+  S+G N YGQLG+G  + +
Sbjct: 556 AHNRQIKLPTLVALP---NEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQ 612

Query: 436 NIPSLVPIHGFLPRNIA-CGWWHTLLLAETTQI 467
           N+P++V +        A CG +HT+LL+E  Q+
Sbjct: 613 NVPNVVALSSNTRMVRATCGCYHTVLLSEQGQV 645



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 155/393 (39%), Gaps = 63/393 (16%)

Query: 46  LCGGDSWKDVCGGGCGFALATSESGKLITWG--SADDEGQSYLTSGKHGETPEPFPLPTE 103
           LCG D  + V  G    A+ T+E G ++T G   +   GQ +         P        
Sbjct: 357 LCGWDDIRQVVSGNETLAVLTNE-GVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQR 415

Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
              + A+ G  H +++T+ G  Y+WG+ +              G    ++   +  +P  
Sbjct: 416 VKFIAASNGCEHMIALTDTGLAYSWGYND-------------RGQLGHENLATKIHVPKL 462

Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG----------DEFFTLSPCLVTLNPGVK 213
                DK+ G   V    ++   +  E    G                +P LV      +
Sbjct: 463 IESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATE 522

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRP 272
           ++ VA G  HT+I +  G+++  G    GQLGL  +R   +PT   +P            
Sbjct: 523 VSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQIKLPTLVALP------------ 570

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                             V  +ACG  HS VV+  G   +FG   YGQ G GS   Q  P
Sbjct: 571 ---------------NEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVP 615

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT--GVDQAENVPKLLETP 390
           +  +   + ++ +   G +HTV +S +G+VYVFG N  GQLG     D    VP L   P
Sbjct: 616 NVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADALLPVP-LKVRP 674

Query: 391 ILESKRAKVVSCGARHSAVLTE------DGQVL 417
              S+R   V+ G   ++++ E      DG V+
Sbjct: 675 EKNSRRCVDVAAGFYTTSLIVERKRENDDGDVI 707



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 7/191 (3%)

Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ---LR 331
           + +  + S    G   ++++  G    AV+T+ G +LT G    GQCG G  +++   LR
Sbjct: 347 IERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLR 406

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETP 390
           P  A     ++    + G  H + ++  G  Y +G N  GQLG   +    +VPKL+E+ 
Sbjct: 407 PVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIES- 465

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPR 449
            L+ K+    S    HSAV+T+ G++ ++G N  GQLGL  +  ++ P LV  +      
Sbjct: 466 -LKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVS 524

Query: 450 NIACGWWHTLL 460
            +ACG +HT++
Sbjct: 525 MVACGLYHTII 535



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 8/110 (7%)

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G +Y  G N +G+LGTG D   +  +L    +      + V  G    AVLT +G VL+ 
Sbjct: 328 GELYSCGQNSYGELGTGDDIERH--QLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTC 385

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI-----ACGWWHTLLLAET 464
           G NK GQ G G   D  +  L P+     + +     + G  H + L +T
Sbjct: 386 GLNKSGQCGQG-HFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDT 434


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 128/242 (52%), Gaps = 27/242 (11%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           +L P  +    G+ I  VAAG  HT  +++ G+++GWG+G  G LGLG R        L+
Sbjct: 17  SLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDR-----NDRLV 71

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
           P    +  G D+ ++V                   ACG RH+  V+  G L T+GW  YG
Sbjct: 72  PQKVSSVDG-DKMVMV-------------------ACGWRHTISVSSLGGLYTYGWSKYG 111

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           Q GHG   D+L P    +L    + QI+ G  HT+ ++ +G++Y +G N+FGQ+G G + 
Sbjct: 112 QLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 171

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
               P  ++ P  + ++   +SCG RH+  +T+   V SWG    GQLG G+S+DRN P 
Sbjct: 172 DHCSPIQIKFP--QDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPM 229

Query: 440 LV 441
           ++
Sbjct: 230 IL 231



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 115/237 (48%), Gaps = 36/237 (15%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG    GQLGLG+    +  P  I   E  +                        +K +A
Sbjct: 1   WGRNQNGQLGLGTTEDSL-VPQKIQAFEGIS------------------------IKMVA 35

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
            G  H+A VT+ G L  +GWG YG  G G  ND+L P   SS+   ++  +A G  HT+ 
Sbjct: 36  AGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTIS 95

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           +S  G +Y +G +++GQLG G  +   VP  LE   L       +S G RH+  LT DG+
Sbjct: 96  VSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEA--LRGDNISQISGGWRHTMALTTDGK 153

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----IACGWWHTLLLAETTQI 467
           +  WGWNK+GQ+G GD+ID       PI    P++     I+CGW HTL + +   +
Sbjct: 154 LYGWGWNKFGQVGAGDNIDH----CSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNV 206



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 108/274 (39%), Gaps = 50/274 (18%)

Query: 75  WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
           WG  +  GQ  L + +    P+        S+   AAG  H  +VTE GE++ WGW    
Sbjct: 1   WGR-NQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGR-- 57

Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE------- 187
                   +G+ G   ++       +P + +     +        R T S          
Sbjct: 58  --------YGNLGLGDRND----RLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTY 105

Query: 188 ---ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
              +      GD    L P  +    G  I++++ G RHT+ L+  G+++GWG+   GQ+
Sbjct: 106 GWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQV 165

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G G  I      H  P        +D+ ++                  +I+CG RH+  V
Sbjct: 166 GAGDNID-----HCSPI--QIKFPQDQKVI------------------QISCGWRHTLAV 200

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
           TD   + ++G G  GQ GHG + D+  P    +L
Sbjct: 201 TDKQNVFSWGRGTNGQLGHGESVDRNTPMILEAL 234



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 80/214 (37%), Gaps = 18/214 (8%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
           +   G     A +E G+L  WG     G   L        P+         +V  A GW 
Sbjct: 33  MVAAGAEHTAAVTEDGELFGWGWGR-YGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWR 91

Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
           H +SV+  G +YT+GW +          +G  G    +       L   +     + +G 
Sbjct: 92  HTISVSSLGGLYTYGWSK----------YGQLGHGDFEDRLVPHRLEALRGDNISQISGG 141

Query: 175 EVVKRRKTSSAR------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
                  T+  +       +     +GD     SP  +      K+ +++ G RHTL ++
Sbjct: 142 WRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVT 201

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           D   V+ WG G  GQLG G  +    TP ++  L
Sbjct: 202 DKQNVFSWGRGTNGQLGHGESVDR-NTPMILEAL 234



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 42  IPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           +P RL    GD+   + GG     +A +  GKL  WG  +  GQ          +P    
Sbjct: 123 VPHRLEALRGDNISQISGG-WRHTMALTTDGKLYGWG-WNKFGQVGAGDNIDHCSPIQIK 180

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
            P +  V++ + GW H ++VT+   V++WG
Sbjct: 181 FPQDQKVIQISCGWRHTLAVTDKQNVFSWG 210


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 169/395 (42%), Gaps = 55/395 (13%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
           G   ++A  E   L +WG  +D GQ  L  G   +   P     F  P   SV+    G 
Sbjct: 29  GASHSVALLEGNVLCSWGRGED-GQ--LGHGDAEDRLVPTVISGFDAPRITSVI---CGA 82

Query: 114 AHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAP 166
            H  + +E   +VY+WGW           DFG  G       F          +  +Q  
Sbjct: 83  DHTTAYSEEEQQVYSWGWG----------DFGRLGHGNSSDVFTPQPVRALQGIKIKQMA 132

Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
             D       +     S  R ++     G    +L P  +    G+ +  +AAG  HT  
Sbjct: 133 CGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAA 192

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           +++ G ++GWG+G  G LGLG R         +P       G+   L             
Sbjct: 193 VTEDGDLYGWGWGRYGNLGLGDR-----NDRFVPEKVSLVEGEKMVL------------- 234

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
                  IACG RH+  V+ +G L T+GW  YGQ GHG   D L P    +L D    QI
Sbjct: 235 -------IACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQI 287

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           + G  HT+ ++ +G++Y +G N+FGQ+G G       P  +  P  E K A+ V+CG RH
Sbjct: 288 SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPA-EQKVAQ-VACGWRH 345

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           +   TE   V +WG    GQLG G+ +DRN P ++
Sbjct: 346 TLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMI 380



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 129/278 (46%), Gaps = 36/278 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+     +P  V    G+KI ++A G  H L ++  G+V  WG    GQLGLG+    + 
Sbjct: 109 GNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSL- 167

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P  I   E                           VK IA G  H+A VT+ G L  +G
Sbjct: 168 LPQKIQAFEGIC------------------------VKMIAAGAEHTAAVTEDGDLYGWG 203

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG YG  G G  ND+  P   S +   ++  IA G  HT+ +S  G +Y +G +++GQLG
Sbjct: 204 WGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLG 263

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G  +    P  +E   L+      +S G RH+  LT DG++  WGWNK+GQ+G GDS+D
Sbjct: 264 HGDFEDHLFPHKVEA--LKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVD 321

Query: 435 RNIPSLVPIHGFLPR-----NIACGWWHTLLLAETTQI 467
                  P+    P       +ACGW HTL   E   +
Sbjct: 322 H----CSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNV 355



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 132/254 (51%), Gaps = 31/254 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRP 272
           +  V+AG  H++ L +   +  WG G +GQLG G +  ++VPT           SG D P
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPT---------VISGFDAP 73

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                             +  + CG  H+ A   +   + ++GWG +G+ GHG+++D   
Sbjct: 74  -----------------RITSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFT 116

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P    +L  I+++Q+A G  H + +++ G V  +G NQ GQLG G  +   +P+ ++   
Sbjct: 117 PQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQA-- 174

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRN 450
            E    K+++ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V  + G     
Sbjct: 175 FEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVL 234

Query: 451 IACGWWHTLLLAET 464
           IACGW HT+ ++ +
Sbjct: 235 IACGWRHTITVSSS 248



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 127/312 (40%), Gaps = 63/312 (20%)

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
           TP+P        + + A G +HC++VT  GEV +WG                     ++ 
Sbjct: 116 TPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWG---------------------RNQ 154

Query: 154 TGKQSALPTEQAP-PSDKRAGEEVVKR------RKTSSAREESE----------NPASGD 196
            G+     TE +  P   +A E +  +        T++  E+ +          N   GD
Sbjct: 155 NGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGD 214

Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
                 P  V+L  G K+  +A G RHT+ +S  G ++ +G+   GQLG G     +  P
Sbjct: 215 RNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHL-FP 273

Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
           H +  L+ +++                         +I+ G RH+  +T  G L  +GW 
Sbjct: 274 HKVEALKDSST------------------------SQISGGWRHTMALTSDGKLYGWGWN 309

Query: 317 LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            +GQ G G + D   P       + +V Q+A G  HT+  + +  V+ +G    GQLG G
Sbjct: 310 KFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHG 369

Query: 377 VDQAENVPKLLE 388
                N P +++
Sbjct: 370 EIVDRNKPLMID 381



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 124/329 (37%), Gaps = 56/329 (17%)

Query: 18  KETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
           +E  VY WG   +        S + +P P R   G   K +  G     LA +  G++ +
Sbjct: 91  EEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDS-HCLAVTMGGEVQS 149

Query: 75  WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
           WG  +  GQ  L + +    P+         V   AAG  H  +VTE G++Y WGW    
Sbjct: 150 WGR-NQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGR-- 206

Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR-------- 186
                   +G+ G   ++       +P + +    ++        R T +          
Sbjct: 207 --------YGNLGLGDRN----DRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTY 254

Query: 187 --EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
              +      GD    L P  V        ++++ G RHT+ L+  G+++GWG+   GQ+
Sbjct: 255 GWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQV 314

Query: 245 GLGSRIKMV-PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
           G G  +    P   + P  +  A                          ++ACG RH+  
Sbjct: 315 GAGDSVDHCSPVQVMFPAEQKVA--------------------------QVACGWRHTLA 348

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            T+   +  +G G  GQ GHG   D+ +P
Sbjct: 349 YTEKKNVFAWGRGTSGQLGHGEIVDRNKP 377


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 134/260 (51%), Gaps = 25/260 (9%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P   +  ++AG  H++ L   G V  WG G +GQLG G                     +
Sbjct: 18  PERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD-------------------AE 58

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG-ALLTFGWGLYGQCGHGSTND 328
           DRP+     +       G + V  + CG  H+   +D    L ++GWG +G+ GHG+++D
Sbjct: 59  DRPVPTVLTAAFDDAPGGVASV--VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD 116

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +L  +++ QIA G  H + ++V G V+ +G NQ GQLG G  +   +P+ ++
Sbjct: 117 VFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQ 176

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
               E  R K+++ GA H+A +TEDG +  WGW +YG LGLGD  DR IP  V  ++G  
Sbjct: 177 A--FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 234

Query: 448 PRNIACGWWHTLLLAETTQI 467
              +ACGW HT+ ++ +  I
Sbjct: 235 MVLVACGWRHTITVSSSGSI 254



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 176/415 (42%), Gaps = 76/415 (18%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--------ASVVKAA 110
           G   ++A    G + +WG  +D GQ  L  G   + P P  L           ASVV   
Sbjct: 28  GASHSVALLSGGVVCSWGRGED-GQ--LGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQ 164
           A      S  E  ++Y+WGW           DFG  G       F          +   Q
Sbjct: 85  ADHTTAYSDEEL-QLYSWGWG----------DFGRLGHGNSSDVFNPQPIQALQGVRITQ 133

Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
               D       V     S  R ++     G+   +L P  +    GV++  +AAG  HT
Sbjct: 134 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHT 193

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
             +++ G ++GWG+G  G LGLG R                    DR +  +  SVN   
Sbjct: 194 AAVTEDGDLYGWGWGRYGNLGLGDR-------------------DDRLIPEKVSSVN--- 231

Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
             G+  V  +ACG RH+  V+ +G++ T+GW  YGQ GHG   D L P    +L D  + 
Sbjct: 232 --GQKMVL-VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTIS 288

Query: 345 Q-----------------IAAGL-WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
           Q                 +  G+ W    ++ +G++Y +G N+FGQ+G G ++    P  
Sbjct: 289 QEEAVELIFFFLGDEGFRVGGGIQW---ALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQ 345

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           +  P    ++   V+CG RH+  LTE   V SWG    GQLG G+ +DRNIP ++
Sbjct: 346 VNFP--NEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMI 398



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 176/402 (43%), Gaps = 70/402 (17%)

Query: 96  EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC------------VPSAKVTRDF 143
           E  P   E SVV  +AG +H V++   G V +WG  E             VP+  +T  F
Sbjct: 12  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTV-LTAAF 70

Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
                   D+ G  +++    A  +   + EE+   +  S    +      G+     +P
Sbjct: 71  -------DDAPGGVASVVICGADHTTAYSDEEL---QLYSWGWGDFGRLGHGNSSDVFNP 120

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             +    GV+IT++A G  H L ++  G V  WG    GQLGLG+         L+P   
Sbjct: 121 QPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGN-----TEDSLLPQKI 175

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
            A  G      VR              VK IA G  H+A VT+ G L  +GWG YG  G 
Sbjct: 176 QAFEG------VR--------------VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 215

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G  +D+L P   SS+   ++  +A G  HT+ +S  G +Y +G +++GQLG G  +   V
Sbjct: 216 GDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLV 275

Query: 384 PKLLE----TPILESKRAKVV---------SCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           P  LE    T I + +  +++           G      L  DG++  WGWNK+GQ+G+G
Sbjct: 276 PHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVG 335

Query: 431 DSIDRNIPSLVPIHGFLPR-----NIACGWWHTLLLAETTQI 467
           D+ D       P+    P       +ACGW HTL L E   +
Sbjct: 336 DNEDH----CSPVQVNFPNEQKVVQVACGWRHTLALTEAKNV 373



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 145/350 (41%), Gaps = 48/350 (13%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKA 109
           +CG     A +  E  +L +WG  D           HG + + F P P +A     + + 
Sbjct: 82  ICGADHTTAYSDEEL-QLYSWGWGD------FGRLGHGNSSDVFNPQPIQALQGVRITQI 134

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           A G +HC++VT AG V++WG  +              G     +T + S LP +      
Sbjct: 135 ACGDSHCLAVTVAGHVHSWGRNQ-------------NGQLGLGNT-EDSLLPQKIQAFEG 180

Query: 170 KRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAA 219
            R          T++  E+ +          N   GD    L P  V+   G K+  VA 
Sbjct: 181 VRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVAC 240

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G RHT+ +S  G ++ +G+   GQLG G     +  PH +  L+     ++  + +    
Sbjct: 241 GWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL-VPHKLEALKDTTISQEEAVELIFFF 299

Query: 280 VNSSG-KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
           +   G + G         GG   A+  D G L  +GW  +GQ G G   D   P   +  
Sbjct: 300 LGDEGFRVG---------GGIQWALAAD-GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFP 349

Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            + +V Q+A G  HT+ ++    V+ +G    GQLG G     N+PK+++
Sbjct: 350 NEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMID 399


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 172/407 (42%), Gaps = 70/407 (17%)

Query: 55  VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
           V G  CG   ++A  + G + +WG  +D GQ          +P      T+A V     G
Sbjct: 12  VLGVSCGSSHSIALLDCGVVASWGRGED-GQLGHGQADQCTSPTCIAALTDAGVDAVVCG 70

Query: 113 WAHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQA 165
             + V+V  + G++Y+WGW           DFG  G       F        S  P  + 
Sbjct: 71  AEYTVAVASSRGQIYSWGWG----------DFGRLGHGECGDVFVPRPIAFFSGRPVARV 120

Query: 166 PPSDKRAGEEVVKRRK---TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
              D      VV +      +  R ++     G     LSP LVT   G +++ VA G  
Sbjct: 121 ACGDTHT--LVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSE 178

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
           H+L  ++ G V+ WG+G  G LG G S+ +  PT                  +V    V 
Sbjct: 179 HSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTR-----------------VVGLDGVT 221

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
                    V  + CG RHSAVVTD G + TFGW  YGQ GHG   D  RP   + L   
Sbjct: 222 ---------VTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHC 272

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---------- 391
           +V  +A G  HT+    EG +Y +G N+FGQLG G  +    P    TP+          
Sbjct: 273 RVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAP----TPVAGFGLAGGGV 328

Query: 392 ----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
                  +R  +++CG RH+  +TE G+V SWG    GQLG G   D
Sbjct: 329 EAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQD 375



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 144/310 (46%), Gaps = 48/310 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           SP  +       +  V  G  +T+ + S  GQ++ WG+G  G+LG G    + VP P   
Sbjct: 52  SPTCIAALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAF 111

Query: 260 PC---LEHAASGKDRPLLVRQGS-------VNSSGKAGRSY-----------------VK 292
                +   A G    L+V QG         N +G+ G  +                 V 
Sbjct: 112 FSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVS 171

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            +ACG  HS   T+AG + ++GWG YG  G G + D+  P+    L  + V  +  G  H
Sbjct: 172 SVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRH 231

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           +  ++ EGRV+ FG +++GQLG G       P L+    L+  R   V+ G RH+     
Sbjct: 232 SAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAG--LQHCRVSTVAGGWRHTMAADS 289

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF------------LPRNI---ACGWWH 457
           +G + +WGWNK+GQLGLGDS DR  P+  P+ GF             PR +   ACGW H
Sbjct: 290 EGNLYAWGWNKFGQLGLGDSEDRAAPT--PVAGFGLAGGGVEAGAATPRRVALLACGWRH 347

Query: 458 TLLLAETTQI 467
           T+ + E  ++
Sbjct: 348 TVAVTEAGEV 357



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 126/258 (48%), Gaps = 30/258 (11%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           ++  V+ G  H++ L D G V  WG G +GQLG G +     +P  I  L  A       
Sbjct: 11  RVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHG-QADQCTSPTCIAALTDAG------ 63

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                             V  + CG  ++ AV +  G + ++GWG +G+ GHG   D   
Sbjct: 64  ------------------VDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFV 105

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISV-EGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
           P   +      V ++A G  HT+ ++  +G +Y FG NQ GQLG G       P+L+   
Sbjct: 106 PRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTA- 164

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPR 449
            L+ +R   V+CG+ HS   TE G V SWGW +YG LG GDS DR  P+ +V + G    
Sbjct: 165 -LQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVT 223

Query: 450 NIACGWWHTLLLAETTQI 467
           ++ CGW H+ ++ +  ++
Sbjct: 224 SVVCGWRHSAVVTDEGRV 241



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           + +V  ++ G  H++ +   G V  +G  + GQLG G  QA+          L       
Sbjct: 9   EARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHG--QADQCTSPTCIAALTDAGVDA 66

Query: 400 VSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGW 455
           V CGA ++ AV +  GQ+ SWGW  +G+LG G+  D  +P   PI  F  R    +ACG 
Sbjct: 67  VVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPR--PIAFFSGRPVARVACGD 124

Query: 456 WHTLLLAE 463
            HTL++ +
Sbjct: 125 THTLVVTQ 132


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 141/274 (51%), Gaps = 29/274 (10%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           D  +   P LV+   G  I +V  G  HT  +SD G +W WG G  G+LG G+ +     
Sbjct: 75  DNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEV----- 129

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
            H  PC   A  G++                    V++IACG RH+A +   G +  +G 
Sbjct: 130 GHPAPCRVEAFIGRE--------------------VEQIACGSRHTAALLAGGEVYCWGD 169

Query: 316 GLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              G CG G +   Q  P    +L  +++ QIAA  +HT  I+ +G ++ +G  +FG+LG
Sbjct: 170 RENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLG 229

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G ++ +  P  +E   L+  R K V+CG  HSA +TEDG VL++G  ++GQLG GD  +
Sbjct: 230 QGNEKNQVTPCCVEG--LQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTN 287

Query: 435 RNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           R +P LV  + G     + CGW HT+ L+E  ++
Sbjct: 288 RTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKV 321



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 153/360 (42%), Gaps = 64/360 (17%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G G  +  +E   + +WG  DD G+           P      T  S+ +   G  H  +
Sbjct: 47  GSGHTVVLTEDKDVWSWGRGDD-GRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAA 105

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS-DKRAGEEVV 177
           +++ G ++TWG                 G + K   G +   P   AP   +   G EV 
Sbjct: 106 ISDTGALWTWG----------------GGMYGKLGHGNEVGHP---APCRVEAFIGREVE 146

Query: 178 K----RRKTSSAREESENPASGD------------EFFTLSPCLVTLNPGVKITKVAAGG 221
           +     R T++     E    GD            E   L   L  L  GVKIT++AA G
Sbjct: 147 QIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALK-GVKITQIAACG 205

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
            HT  ++  G +W WG G  G+LG G+    V      PC      G      VR     
Sbjct: 206 FHTAAITQDGALWSWGEGKFGRLGQGNEKNQVT-----PCCVEGLQG------VR----- 249

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
                    VK++ACGG HSA VT+ G +LTFG G +GQ GHG   ++  P    +L   
Sbjct: 250 ---------VKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGA 300

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            + Q+  G  HTV +S +G+V+ FG    G+LG G +    +PKL+E+ +   K AKV S
Sbjct: 301 GIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVES-LANMKVAKVAS 359



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 151/372 (40%), Gaps = 61/372 (16%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
           A S++G L TWG     G  Y   G   E   P P   EA     V + A G  H  ++ 
Sbjct: 105 AISDTGALWTWG-----GGMYGKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALL 159

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
             GEVY WG RE              G        +   LP +       +  +      
Sbjct: 160 AGGEVYCWGDRE-------------NGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGF 206

Query: 181 KTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
            T++  ++                G+E   ++PC V    GV++ +VA GG H+  +++ 
Sbjct: 207 HTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTED 266

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G V  +G G  GQLG G +     T   +PCL  A  G                 AG   
Sbjct: 267 GDVLTFGGGEHGQLGHGDK-----TNRTVPCLVKALEG-----------------AG--- 301

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           + ++ CG  H+  +++ G + TFG G +G+ GHG+      P    SL +++V ++A+  
Sbjct: 302 IVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVESLANMKVAKVASYN 361

Query: 351 WHTVCI-SVEGRVYVFGGNQFGQLGTGVDQAE--NVPKLLETPILESKRAKVVSCGARHS 407
            HTV +   E    V   +    L   ++ A+  +V  L+E   + + RA V++   +H 
Sbjct: 362 EHTVALCHAEQEQAVMSFDFLKDLRRLINNADFADVVFLVEGQRVHAHRA-VLAMRCQHF 420

Query: 408 AVLTEDGQVLSW 419
             + + G   SW
Sbjct: 421 RAMFKSGMRESW 432



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 84/155 (54%), Gaps = 7/155 (4%)

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           L ++G G  GQCG+GSTNDQ  P     L  + V QIA G  HTV ++ +  V+ +G   
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGD 67

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+LG   +  + VP L+    L  K  K V+CG+ H+A +++ G + +WG   YG+LG 
Sbjct: 68  DGRLGHADNHWKYVPHLVSA--LTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGH 125

Query: 430 GDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLL 461
           G+ +    P+   +  F+ R    IACG  HT  L
Sbjct: 126 GNEVGH--PAPCRVEAFIGREVEQIACGSRHTAAL 158


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 164/384 (42%), Gaps = 46/384 (11%)

Query: 93  ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
           ET E      E  V   + G +H V++   G V +WG  E           G  G  Q D
Sbjct: 2   ETAEARSSEEEPGVTAVSCGSSHSVAILSCGIVTSWGRGE----------DGQLGHGQAD 51

Query: 153 STGKQSALPT-EQAPPSDKRAGEEVVKRRKTSSAREES------ENPASGDEFFTLSPCL 205
                 A+ T   A       G E       S  +  S           GD      P  
Sbjct: 52  ECLAPKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRP 111

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
           +    G  + +VA G  HTL+++  G+++ +G    GQLGLG         H   CL   
Sbjct: 112 IEFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLG---------HTNDCLS-- 160

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                 P LV    V   G+     V+ +ACG  HS   T++G + ++GWG YG  G G 
Sbjct: 161 ------PQLV----VALQGE----RVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGE 206

Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
           + D+  P+    L  I++     G  H+  +S +GRV+ FG +++GQLG G      VP 
Sbjct: 207 SQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVP- 265

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PI 443
             +   L   R   V+ G RH+      G +  WGWNK+GQLGLGDS DR  P LV   +
Sbjct: 266 -CQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGAL 324

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G     + CGW HT+ + E  ++
Sbjct: 325 AGQRVSLVTCGWRHTVAVTEGGRV 348



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 169/387 (43%), Gaps = 52/387 (13%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAGWAHC 116
           G   ++A    G + +WG  +D GQ  L  G+  E   P+     T+A +     G  + 
Sbjct: 21  GSSHSVAILSCGIVTSWGRGED-GQ--LGHGQADECLAPKAISTLTDAGIESVVCGAEYT 77

Query: 117 VSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSD 169
           ++V  + G+VY+WGW           DFG  G       F        S  P  +    D
Sbjct: 78  IAVAPSRGQVYSWGW----------GDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGD 127

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
                   +    +  R ++     G     LSP LV    G ++  VA G  H+L  ++
Sbjct: 128 THTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATE 187

Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            G V+ WG+G  G LG G                     +DR L  R          G  
Sbjct: 188 SGTVFSWGWGRYGNLGDGES-------------------QDRYLPTR--------VVGLE 220

Query: 290 YVKEIA--CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
            ++ ++  CG RHSAVV++ G + TFGW  YGQ GHG   D+  P   ++L   ++  +A
Sbjct: 221 GIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVA 280

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            G  HT+     G +Y +G N+FGQLG G D ++    +L    L  +R  +V+CG RH+
Sbjct: 281 GGWRHTMAADSSGNLYGWGWNKFGQLGLG-DSSDRPSPVLVGGALAGQRVSLVTCGWRHT 339

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSID 434
             +TE G+V SWG    GQLG G   D
Sbjct: 340 VAVTEGGRVYSWGRGVNGQLGHGAEQD 366


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 158/315 (50%), Gaps = 39/315 (12%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD      P LV      +  +++ G  HT++L+D G+V+ WG G +G+LG
Sbjct: 8   RGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGRLG 67

Query: 246 LGSR-IKMVPTPHLIPCLE------------HAASGKDRPLLV--------RQGSVNSSG 284
            G    K VP   L+  L             H A+      L         + G  N +G
Sbjct: 68  HGDNGWKFVP--RLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENG 125

Query: 285 KAGRS--------YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYA 335
            +  S        YV+++ACG RH+ V+ +   + T+G    G  GHG T+  Q  P   
Sbjct: 126 HSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPYCV 185

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           S L++I ++QI+A  +HT  +S  G+V+ FG  +FG+LG   ++ + V K ++  I   K
Sbjct: 186 SELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALI--GK 243

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---A 452
           R K V+CG  H+A +TE G V +WG  ++GQLG GD +++ IP+ V     + +NI    
Sbjct: 244 RIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVE--SLIDKNIIQLT 301

Query: 453 CGWWHTLLLAETTQI 467
           CGW HT+ L +  ++
Sbjct: 302 CGWSHTVALTDKGEV 316



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 170/412 (41%), Gaps = 73/412 (17%)

Query: 22  VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
           VY WG        L  TS +  PIL      L    + +  CG G    L  ++ GK+ T
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHPILVEA---LQDRQTVQISCGSGHTVVL--TDDGKVYT 57

Query: 75  WGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
           WG  DD     L  G +G    P       +  V +   G  H  +VT +GE+YTWG   
Sbjct: 58  WGRGDD---GRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWG--- 111

Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK--RAGEEVVKRRKTSSARE--- 187
                         G + K   G ++   T     S K     +     R T    E   
Sbjct: 112 -------------GGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQD 158

Query: 188 -----ESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
                + EN  SG         SP  V+    + I +++A G HT  LS+ GQV+ +G G
Sbjct: 159 VYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEG 218

Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
             G+LG  S  +  P    I  L                     GK     +K++ACGG 
Sbjct: 219 KFGRLGHNSE-RNQPVAKCIDAL--------------------IGKR----IKQVACGGF 253

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           H+A VT++G + T+G G +GQ GHG   +Q+ P+   SL+D  + Q+  G  HTV ++ +
Sbjct: 254 HTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDK 313

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           G V+ +G    G+LG         PKL+ET    SKR   V+    H+  L 
Sbjct: 314 GEVFTWGNGDHGKLGHNDTNKVTEPKLIET--FNSKRVISVASYNEHTVALV 363



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 119/240 (49%), Gaps = 35/240 (14%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V+ WG G +GQLGLG                   S +  P+LV            R  V 
Sbjct: 3   VYTWGRGEDGQLGLGD-----------------TSDQYHPILVE-------ALQDRQTV- 37

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           +I+CG  H+ V+TD G + T+G G  G+ GHG    +  P     L D +V Q+  G +H
Sbjct: 38  QISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYH 97

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           T  ++V G +Y +GG  +G+LG G +   + P L+E+  ++    + V+CG+RH+ VL E
Sbjct: 98  TAAVTVSGELYTWGGGMYGKLGHGNENGHSTPSLVES--IKGLYVRQVACGSRHTVVLLE 155

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRN-----IPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           +  V +WG  + G  G GD+         +  LV I+  + +  ACG +HT  L+E  Q+
Sbjct: 156 NQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEIN--IKQISACG-FHTAALSENGQV 212


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 130/272 (47%), Gaps = 36/272 (13%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+     +P  V    G+KI ++A G  H L ++  G+V  WG    GQLGLG+    + 
Sbjct: 102 GNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSL- 160

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P  I   E  +                        VK IA G  H+A VT+ G +  +G
Sbjct: 161 LPQTIQAFEGIS------------------------VKMIAAGAEHTAAVTEDGDIYGWG 196

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG YG  G G  ND+  P   SS+   ++  +A G  HT+ +S  G +Y +G +++GQLG
Sbjct: 197 WGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLG 256

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G  +   VP  +E   L+      +S G RH+  LT DG++  WGWNK+GQ+G GD+ D
Sbjct: 257 HGDFEDHLVPHKVEA--LKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNAD 314

Query: 435 RNIPSLVPIHGFLPR-----NIACGWWHTLLL 461
              P+ V      P       +ACGW HTL  
Sbjct: 315 HCSPAQVN----FPEEQKVAQVACGWRHTLAF 342



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 130/254 (51%), Gaps = 31/254 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRP 272
           +  V+AG  H++ L     +  WG G +GQLG G +  ++VPT           SG D P
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPT---------VISGFDAP 66

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                             +  + CG  H +A   D   + ++GWG +G+ GHG++ D   
Sbjct: 67  -----------------GITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFT 109

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P    +L  I+++Q+A G  H + +++ G V  +G NQ GQLG G  +   +P+ ++   
Sbjct: 110 PQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQA-- 167

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRN 450
            E    K+++ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V  + G     
Sbjct: 168 FEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVL 227

Query: 451 IACGWWHTLLLAET 464
           +ACGW HT+ ++ +
Sbjct: 228 VACGWRHTITVSSS 241



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 154/365 (42%), Gaps = 55/365 (15%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
           G   ++A      L TWG  +D GQ  L  G   +   P     F  P   SV+  A   
Sbjct: 22  GASHSVALLAGNVLCTWGRGED-GQ--LGHGDAEDRLVPTVISGFDAPGITSVICGAD-- 76

Query: 114 AHCVSVTE-AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAP 166
            H  + +E   +VY+WGW           DFG  G       F          +  +Q  
Sbjct: 77  -HTTAYSEDEHQVYSWGWG----------DFGRLGHGNSTDVFTPQPVKALQGIKIKQLA 125

Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
             D       +     S  R ++     G    +L P  +    G+ +  +AAG  HT  
Sbjct: 126 CGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAA 185

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           +++ G ++GWG+G  G LGLG R      P  +  +E      D+ +LV           
Sbjct: 186 VTEDGDIYGWGWGRYGNLGLGDRNDRF-VPEKVSSVE-----GDKMVLV----------- 228

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
                   ACG RH+  V+ +G+L T+GW  YGQ GHG   D L P    +L D    QI
Sbjct: 229 --------ACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQI 280

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           + G  HT+ ++ +G++Y +G N+FGQ+G G +     P  +  P  E ++   V+CG RH
Sbjct: 281 SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFP--EEQKVAQVACGWRH 338

Query: 407 SAVLT 411
           +   T
Sbjct: 339 TLAFT 343



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 35/248 (14%)

Query: 18  KETVVYMWGYLP------GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGK 71
            E  VY WG+        G S +   + +P P +   G   K +  G     LA + +G+
Sbjct: 84  DEHQVYSWGWGDFGRLGHGNSTD---VFTPQPVKALQGIKIKQLACGDS-HCLAVTMAGE 139

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           +++WG  +  GQ  L + +    P+        SV   AAG  H  +VTE G++Y WGW 
Sbjct: 140 VLSWGR-NQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWG 198

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE- 190
                      +G+ G   ++       +P + +     +        R T +       
Sbjct: 199 R----------YGNLGLGDRN----DRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSL 244

Query: 191 ---------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
                        GD    L P  V        ++++ G RHT+ L+  G+++GWG+   
Sbjct: 245 YTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKF 304

Query: 242 GQLGLGSR 249
           GQ+G G  
Sbjct: 305 GQVGAGDN 312


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 171/419 (40%), Gaps = 97/419 (23%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA    G+L TWG        +    K   +P P       S+V+AA G  HC++V + 
Sbjct: 56  SLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK 115

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G  Y WG  E          +G  G                                   
Sbjct: 116 GRAYAWGGNE----------YGQCG----------------------------------- 130

Query: 183 SSAREESENPASGDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
               EE+E    G        P      P +K+ +VAAGG H+++L+  G VW W     
Sbjct: 131 ----EEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTW----- 181

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           GQ      IK + TP  +  LE+                          VK IA G  H+
Sbjct: 182 GQPWPPGDIKQISTPVRVQGLEN--------------------------VKVIAVGAFHN 215

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
             +T+ G L  +G   YGQ G G T  + +P     L D+ +  IAAG WH+  ++ EG 
Sbjct: 216 LALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGE 275

Query: 362 VYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           VY +G  + G+LG G D++ + VP+ +E  +L  +    VSCG  HS  LT DG++ S+G
Sbjct: 276 VYAWGRGEHGRLGFGDDKSSHMVPQKVE--LLAGEDIIQVSCGGTHSVALTRDGRMFSYG 333

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFLP-------------RNIACGWWHTLLLAETTQ 466
              +G+LG G  +    P  VPI    P             R +ACG  HTL +A  T+
Sbjct: 334 RGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIATWTE 392



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 6/105 (5%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           V  +G  + GQLG G  + E+  + +    L++     V  G+R+S  +  DG++ +WGW
Sbjct: 13  VLAWGSGEDGQLGMGGYEEEDWARGVAA--LDALAVSAVVAGSRNSLAICADGRLFTWGW 70

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLLLAE 463
           N+ G LG      +   S  P+      +I   A G WH L + +
Sbjct: 71  NQRGTLGHPPET-KTESSPAPVDALAGVSIVQAAIGGWHCLAVDD 114


>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
 gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
          Length = 594

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 140/265 (52%), Gaps = 28/265 (10%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQ-VWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           SP   +++  + I  +A G  HTL +++    ++ WG    GQLGLG +I          
Sbjct: 96  SPVQFSIDIKISIKTIACGDSHTLAIAENPYGLYSWGCNRWGQLGLGDQIN--------- 146

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                   +++P  +          + R+    IACG +HS +V++ G L TFG G  G+
Sbjct: 147 --------RNQPTRINH--------SDRATFVAIACGSQHSMIVSNFGELYTFGCGTTGR 190

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            G G  + + +P+  SSL+  Q+    AG+ H+ C+   G++Y FG N++GQLGTG  ++
Sbjct: 191 LGLGDESPRFKPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIYSFGWNRYGQLGTGSVKS 250

Query: 381 ENVP-KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
             +P K+ ET I        V CG  H+  L+ +G+++S+G+N  GQLG+G  +D+  P+
Sbjct: 251 HTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNACGQLGVGSHLDQINPT 310

Query: 440 LVPIHGFLPRNIACGWWHTLLLAET 464
            +     +  +IA G++H+L + + 
Sbjct: 311 KIEFSEKV-LDIATGYYHSLCVTDN 334



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/325 (20%), Positives = 129/325 (39%), Gaps = 88/325 (27%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+     P  +  +       +A G +H++I+S+ G+++ +G G  G+LGLG       
Sbjct: 142 GDQINRNQPTRINHSDRATFVAIACGSQHSMIVSNFGELYTFGCGTTGRLGLGDE----- 196

Query: 255 TPHLIPCLEHAASGKDRPL----LVRQGSVNSSGK------------------------- 285
           +P   P +  +  GK        ++    V+S+GK                         
Sbjct: 197 SPRFKPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIYSFGWNRYGQLGTGSVKSHTLPAK 256

Query: 286 ------AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS---YAS 336
                   + +  ++ CG  H+  +++ G +++FG+   GQ G GS  DQ+ P+   ++ 
Sbjct: 257 MKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNACGQLGVGSHLDQINPTKIEFSE 316

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG---------------------- 374
            ++DI     A G +H++C++  G  Y +G    G LG                      
Sbjct: 317 KVLDI-----ATGYYHSLCVTDNGEAYSWGYMSDGGLGLSEVYTHQTKPKLIPLVHIRHT 371

Query: 375 ------------------TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
                             T  +  EN  K ++         + V  GA +SA++T  G++
Sbjct: 372 FSDSNDAFDEIYGKGDENTTEETIENHKKYIQDKYSTGDFVEKVGAGAWNSAIITSSGKL 431

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLV 441
            ++G+    + G  +  D++IP ++
Sbjct: 432 YTFGYGDTFRTGNHEENDQDIPIII 456



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 126/313 (40%), Gaps = 65/313 (20%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAA 111
           G   ++  S  G+L T+G          T+G+ G   E+P   P    +     +V   A
Sbjct: 167 GSQHSMIVSNFGELYTFGCG--------TTGRLGLGDESPRFKPTVVSSLVGKQIVSCGA 218

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE--QAPPSD 169
           G  H   V   G++Y++GW            +G  G+     + K   LP +  +   + 
Sbjct: 219 GVMHSSCVDSTGKIYSFGWNR----------YGQLGT----GSVKSHTLPAKMKETQITS 264

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC--------LVTLNP-----GVKITK 216
           K    +VV  +  + A   +    S    F  + C        L  +NP       K+  
Sbjct: 265 KMHFVKVVCGKNHTLALSNNGEMVS----FGFNACGQLGVGSHLDQINPTKIEFSEKVLD 320

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC--LEHAASGKDRPL- 273
           +A G  H+L ++D G+ + WGY  +G LGL         P LIP   + H  S  +    
Sbjct: 321 IATGYYHSLCVTDNGEAYSWGYMSDGGLGLSEVYTHQTKPKLIPLVHIRHTFSDSNDAFD 380

Query: 274 -LVRQGSVNSSGKAGRS-------------YVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            +  +G  N++ +   +             +V+++  G  +SA++T +G L TFG+G   
Sbjct: 381 EIYGKGDENTTEETIENHKKYIQDKYSTGDFVEKVGAGAWNSAIITSSGKLYTFGYGDTF 440

Query: 320 QCGHGSTNDQLRP 332
           + G+   NDQ  P
Sbjct: 441 RTGNHEENDQDIP 453



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 42/228 (18%)

Query: 53  KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
           K VCG      LA S +G+++++G  +  GQ  L  G H +   P  +     V+  A G
Sbjct: 270 KVVCGKN--HTLALSNNGEMVSFG-FNACGQ--LGVGSHLDQINPTKIEFSEKVLDIATG 324

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR- 171
           + H + VT+ GE Y+WG+             G +  +   +  K   L   +   SD   
Sbjct: 325 YYHSLCVTDNGEAYSWGYMS-------DGGLGLSEVYTHQTKPKLIPLVHIRHTFSDSND 377

Query: 172 AGEEVVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
           A +E+  +   ++  E  EN      D++ T          G  + KV AG  ++ I++ 
Sbjct: 378 AFDEIYGKGDENTTEETIENHKKYIQDKYST----------GDFVEKVGAGAWNSAIITS 427

Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
            G+++ +GYG   + G                  H  + +D P+++ Q
Sbjct: 428 SGKLYTFGYGDTFRTG-----------------NHEENDQDIPIIIEQ 458


>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein, partial [Acanthamoeba castellanii
           str. Neff]
          Length = 872

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 189/445 (42%), Gaps = 72/445 (16%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLT 87
           G   +    L PI      G   + V    CG   ++A  E+G +  WG A  EGQ  L 
Sbjct: 9   GAGRDNKEALEPILLERFRGKRIRSVA---CGEQHSMAVGETGDVYVWGRAK-EGQ--LG 62

Query: 88  SGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGW-RECVPSAKVTRD 142
           +G+        P+  E      VV    G+ HC++VT  G++Y WG   + V  +     
Sbjct: 63  NGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSANKEY 122

Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE---SENPASGDEFF 199
           FG A           S L +++      R+         T    EE    +N  S   + 
Sbjct: 123 FGMAIGL--------SGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYT 174

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
             SP +VT    VK+ +VAAG   +L ++  G+V+ WG+  + QLGLG R      P L+
Sbjct: 175 QPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQ-SVPQLV 233

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
           P L+                          ++    CG +HS +++ AG + TFG G++G
Sbjct: 234 PHLQGV------------------------HIVSATCGQQHSVLLSAAGHVYTFGLGVFG 269

Query: 320 QCGHGSTNDQLRPSYASSLMDIQ---------VEQIAAGLWHTVCISVEGRVYVFGGNQF 370
           Q GHG ++D+  P    +L+  +         + QIA G  HT+ + V G V+ +G  ++
Sbjct: 270 QLGHGVSSDERFPRRVEALVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEY 329

Query: 371 GQLG---------TGVDQAENVPKLLETP-----ILESKRAKVVSCGARHSAVLTEDGQV 416
           GQ G         TG    ++   +  TP       + K    VSCG  H+     DG V
Sbjct: 330 GQQGGTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSV 389

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLV 441
            SWGW  YG LG G+   + +P L+
Sbjct: 390 YSWGWGSYGVLGHGNHRFQLVPKLI 414



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 116/282 (41%), Gaps = 38/282 (13%)

Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           A  D    L P L+    G +I  VA G +H++ + + G V+ WG   EGQLG G R   
Sbjct: 10  AGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQLGNGER--- 66

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                        A+   +P+ V +G  +    AG        CG  H   VT  G L  
Sbjct: 67  ------------KAANALKPVRV-EGLRHERVVAG-------VCGYNHCLAVTVGGKL-- 104

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG--GNQF 370
           + WG+  +   GS N +         M I +  + +     +        Y  G  G + 
Sbjct: 105 YQWGMLHKHVEGSANKEYFG------MAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEEL 158

Query: 371 GQLGTGVDQAENVPKLLETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            +L    +     P    +P     L+  +   V+ G   S  +T  G+V SWG+N+  Q
Sbjct: 159 EELSRVQNFGSFTPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQ 218

Query: 427 LGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           LGLG   ++++P LVP + G    +  CG  H++LL+    +
Sbjct: 219 LGLGHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHV 260



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 126/326 (38%), Gaps = 64/326 (19%)

Query: 36  SPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
           +P   P P  + G    K V    G  F+LA +  G++ +WG  +++ Q  L    +   
Sbjct: 171 TPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGF-NEKCQLGLGHRYNQSV 229

Query: 95  PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
           P+  P      +V A  G  H V ++ AG VYT+G                 G F +   
Sbjct: 230 PQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGL----------------GVFGQLGH 273

Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
           G  S               +E   RR  +    E    ++G+                +I
Sbjct: 274 GVSS---------------DERFPRRVEALVPAEEGVESAGE----------------RI 302

Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK---DR 271
            ++A G  HTL L   G VW WG    GQ G G+              E  A+G+     
Sbjct: 303 VQIACGSHHTLALGVSGTVWTWGSAEYGQQG-GTN-----------AYEDWATGQRAEKS 350

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
             ++     + SG     ++  ++CG  H+      G++ ++GWG YG  GHG+   QL 
Sbjct: 351 AAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLV 410

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCIS 357
           P     +   ++ Q AAG  H++ ++
Sbjct: 411 PKLIRRIGGERIVQTAAGAKHSLAVN 436



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 366 GGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           G  + G+LG G D  E + P LLE      KR + V+CG +HS  + E G V  WG  K 
Sbjct: 1   GTGKVGELGAGRDNKEALEPILLER--FRGKRIRSVACGEQHSMAVGETGDVYVWGRAKE 58

Query: 425 GQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHTL 459
           GQLG G+    N    V + G     +    CG+ H L
Sbjct: 59  GQLGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCL 96



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 1/108 (0%)

Query: 314 GWGLYGQCGHGSTNDQ-LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G G  G+ G G  N + L P         ++  +A G  H++ +   G VYV+G  + GQ
Sbjct: 1   GTGKVGELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQ 60

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           LG G  +A N  K +    L  +R     CG  H   +T  G++  WG
Sbjct: 61  LGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWG 108


>gi|449016322|dbj|BAM79724.1| similar to UVB-resistance protein UVR8 [Cyanidioschyzon merolae
           strain 10D]
          Length = 457

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 146/281 (51%), Gaps = 35/281 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRP 272
           I  VA G  HT  +S  G+++ WG G  G+LG G+ ++  +P P  +  ++    G+  P
Sbjct: 132 IEAVACGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWP--VSTVQEKVPGQ--P 187

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ--- 329
             VR+    S        +  + CG  HS  ++  G + T GWG YGQ GHGS ND+   
Sbjct: 188 GNVRR----SLAIPSECQIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGSCNDEPSL 243

Query: 330 ----LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV--DQ--AE 381
                R  + ++L ++++ ++A+G  HT+ ++ +GR+Y FG N++GQLG  +  DQ  AE
Sbjct: 244 LAVTFRDEHGNALPNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQETAE 303

Query: 382 N---------VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           N          P+LL    L  +R   ++CG RHS  L++ G+V+ WG    GQLGLG+S
Sbjct: 304 NPTSKQCVFSEPRLLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLGLGES 363

Query: 433 IDRN-IPSLV-----PIHGFLPRNIACGWWHTLLLAETTQI 467
           I     P ++     P+       IACG  +TL L    +I
Sbjct: 364 ITMTPTPQILNTRNSPLASRRVTGIACGHENTLFLVSDNEI 404



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 151/389 (38%), Gaps = 92/389 (23%)

Query: 60  CG--FALATSESGKLITWGSADD-------EGQSYL----------TSGKHGETPEPFPL 100
           CG     A S  G+L +WG   +       E +S+L            G+ G       +
Sbjct: 137 CGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKVPGQPGNVRRSLAI 196

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
           P+E  +V    G+ H V+++  G VYT GW             G+ G     S   + +L
Sbjct: 197 PSECQIVAVECGYHHSVALSAIGVVYTCGW-------------GAYGQLGHGSCNDEPSL 243

Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                                  + R+E  N                  P ++I KVA+G
Sbjct: 244 --------------------LAVTFRDEHGNAL----------------PNLRIIKVASG 267

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
            RHTL+L+D G+++G+G    GQLG+                E A +   +  +  +  +
Sbjct: 268 DRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQ----------ETAENPTSKQCVFSEPRL 317

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-----NDQLRPSYA 335
            + G      + +IACG RHS  ++D G ++ +G G+ GQ G G +       Q+  +  
Sbjct: 318 LTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLGLGESITMTPTPQILNTRN 377

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           S L   +V  IA G  +T+ +  +  +YV G  ++G LG G        + +   +    
Sbjct: 378 SPLASRRVTGIACGHENTLFLVSDNEIYVTGSGEYGLLGIGAGAPRMAFEPVRVQLPPGF 437

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           R    + G  H+A         +WG+  +
Sbjct: 438 RVDRATMGHFHAA---------AWGYRSH 457



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 48/223 (21%)

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQ----- 342
           ++V ++ACGG H+A++   GAL T G GLYGQ G G    ++  P+    ++  +     
Sbjct: 62  NHVLQVACGGSHTAILLRNGALYTVGHGLYGQLGLGQRIRRVSLPTRVRGVLGPEAITNV 121

Query: 343 ----------VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-------------- 378
                     +E +A G +HT  +S +GR++ +GG + G+LGTG +              
Sbjct: 122 GRSSAVALPPIEAVACGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQE 181

Query: 379 ----QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
               Q  NV + L  P     +   V CG  HS  L+  G V + GW  YGQLG G   D
Sbjct: 182 KVPGQPGNVRRSLAIP--SECQIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGSCND 239

Query: 435 RNIPSLVPI-----HG-FLPR----NIACGWWHTLLLAETTQI 467
              PSL+ +     HG  LP      +A G  HTL+L +  +I
Sbjct: 240 E--PSLLAVTFRDEHGNALPNLRIIKVASGDRHTLVLTDDGRI 280



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 106/242 (43%), Gaps = 38/242 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           +I  V  G  H++ LS +G V+  G+G  GQLG GS            C        D P
Sbjct: 201 QIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGS------------C-------NDEP 241

Query: 273 LLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL- 330
            L+     +  G A  +  + ++A G RH+ V+TD G +  FG   YGQ G   + DQ  
Sbjct: 242 SLLAVTFRDEHGNALPNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQET 301

Query: 331 --------------RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
                         R     +L   ++ QIA G  H+V +S +G V  +G    GQLG G
Sbjct: 302 AENPTSKQCVFSEPRLLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLGLG 361

Query: 377 VDQAEN-VPKLLET--PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
                   P++L T    L S+R   ++CG  ++  L  D ++   G  +YG LG+G   
Sbjct: 362 ESITMTPTPQILNTRNSPLASRRVTGIACGHENTLFLVSDNEIYVTGSGEYGLLGIGAGA 421

Query: 434 DR 435
            R
Sbjct: 422 PR 423


>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1711

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 129/273 (47%), Gaps = 28/273 (10%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           +    L P     +  VK    + G  H + L+D G  + WGY   GQLG  +    V  
Sbjct: 393 ERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVHV 452

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
           P LI  L      KD+ L  R  SV        SY         HSAV+TD+G L  FG 
Sbjct: 453 PKLIESL------KDKKL--RYASV--------SY--------HHSAVITDSGELYAFGM 488

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
              GQ G   T  Q  P         ++  +A GL+HT+  +  G ++  G N +GQLG 
Sbjct: 489 NDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQLGL 548

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G ++   V  L+  P   ++    V+ G  HS V+T  G+  S+G N YGQLG+G+ + +
Sbjct: 549 GHNRQIKVASLVSLP---NEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQ 605

Query: 436 NIPSLVPIHGFLPRNIA-CGWWHTLLLAETTQI 467
           N+P++V +        A CG +HT+LL+E  Q+
Sbjct: 606 NVPNVVALSANTRMVRATCGCYHTVLLSEQGQV 638



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 7/179 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIA 347
           ++++A G    AV+T+ G +LT G    GQCG G  +++   LRP  A     ++    +
Sbjct: 356 IRQVASGNETLAVLTNDGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAAS 415

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARH 406
            G  H + ++  G  Y +G N  GQLG   +    +VPKL+E+  L+ K+ +  S    H
Sbjct: 416 NGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVHVPKLIES--LKDKKLRYASVSYHH 473

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
           SAV+T+ G++ ++G N  GQLGL  +  ++ P LV    G     +ACG +HT++   T
Sbjct: 474 SAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTAT 532



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 137/359 (38%), Gaps = 89/359 (24%)

Query: 58  GGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
            GC   +A ++SG   +WG  D    G   LT+  H   P+      +  +  A+  + H
Sbjct: 416 NGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVH--VPKLIESLKDKKLRYASVSYHH 473

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
              +T++GE+Y +G  +C             G    D T  QS                 
Sbjct: 474 SAVITDSGELYAFGMNDC-------------GQLGLDHTQHQS----------------- 503

Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
                                     +P LV    G +I+ VA G  HT+I +  G ++ 
Sbjct: 504 --------------------------TPQLVKGFEGTEISMVACGLYHTIICTATGGLFA 537

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
            G    GQLGLG                            RQ  V S        V  +A
Sbjct: 538 CGKNDYGQLGLGHN--------------------------RQIKVASLVSLPNEMVSYVA 571

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
            G  HS VVT++G   +FG   YGQ G G+   Q  P+  +   + ++ +   G +HTV 
Sbjct: 572 SGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCYHTVL 631

Query: 356 ISVEGRVYVFGGNQFGQLGT--GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           +S +G+V+VFG N  GQLG     D    VP L   P   S+R   V+ G   ++++ E
Sbjct: 632 LSEQGQVFVFGRNNKGQLGNRGSADALLPVP-LKVRPEKNSRRCVDVAAGFYTTSLIVE 689



 Score = 45.1 bits (105), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G +Y  G N +G+LGTG D   +  +L    +      + V+ G    AVLT DG VL+ 
Sbjct: 321 GELYSCGQNSYGELGTGDDIERH--QLTSISLCGWDDIRQVASGNETLAVLTNDGVVLTC 378

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
           G NK GQ G G   D  +  L P+     + +
Sbjct: 379 GLNKSGQCGQG-HFDERVMMLRPVQALRSQRV 409


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 131/256 (51%), Gaps = 31/256 (12%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-EHAASGKDRPLLV 275
           VA GG HT+ +++ G+V  WG+G EGQLG G+       P ++  L  H   G       
Sbjct: 75  VACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQT-VPAVVKALSNHRVCG------- 126

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                             +ACG  H+AVVTD G ++ +G G  GQ G G     L P   
Sbjct: 127 ------------------VACGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTV 168

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE--NVPKLLETPILE 393
           S+L + ++ QIA G+ HT+ +SV G +Y +G    GQLG G  Q E  +V    +  + E
Sbjct: 169 STLYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDE 228

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNI 451
            ++ + ++CG+RH   +T+D ++ SWG    G+LGLGDS  R  P++V   I       +
Sbjct: 229 EEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYV 288

Query: 452 ACGWWHTLLLAETTQI 467
           A G  HT +L++  +I
Sbjct: 289 AAGGHHTAVLSDNGEI 304



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 157/377 (41%), Gaps = 64/377 (16%)

Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
           +  A G  H V+VTE GEV +WGW             GS  +F +        +P     
Sbjct: 73  IYVACGGHHTVAVTEDGEVVSWGWGN-------EGQLGSGNAFDQ-------TVPAVVKA 118

Query: 167 PSDKRAGEEVVKRRKTSSARE----------ESENPASGDEFFTLSPCLVTLNPGVKITK 216
            S+ R          T+   +           S     GD   +L P  V+     KI +
Sbjct: 119 LSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQ 178

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTPHLIPCLEHAASGKDRPL 273
           +A G  HTL LS  G+++ WG G +GQLG+G   +    V TP  +   E          
Sbjct: 179 IACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDE---------- 228

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                             + IACG RH   +TD   L ++G G  G+ G G +  +  P+
Sbjct: 229 --------------EEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESRFSPT 274

Query: 334 YAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPK------ 385
               S+ ++++  +AAG  HT  +S  G ++  G   +GQLG G  D    + K      
Sbjct: 275 VVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQLTLKKARALRH 334

Query: 386 ---LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLV 441
              LL    L  K+    +CG  H+ V++  G+V +WG  + GQLG G +   N P  L 
Sbjct: 335 GCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTGGTEGANSPVELT 394

Query: 442 PIHGFLPRNIACGWWHT 458
            + G +  +++CG  H+
Sbjct: 395 SLRGLVG-DVSCGLVHS 410



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 92/191 (48%), Gaps = 19/191 (9%)

Query: 294 IACGGRHSAVVTDAGALLTF-GWGLYGQCGHGSTNDQLRPS-------YASSLMDIQVEQ 345
           +A G R    + D G   +  GWG +G+ GHG T  QL P        +  SL    +  
Sbjct: 7   MAEGERLRRELEDGGKRTSLQGWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAH 66

Query: 346 --------IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
                   +A G  HTV ++ +G V  +G    GQLG+G    + VP +++   L + R 
Sbjct: 67  ESLNGAIYVACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKA--LSNHRV 124

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
             V+CG  H+AV+T+ G V+ WG    GQLG GD     +P  V  ++    R IACG  
Sbjct: 125 CGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMA 184

Query: 457 HTLLLAETTQI 467
           HTL L+   +I
Sbjct: 185 HTLALSVNGEI 195



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 142/352 (40%), Gaps = 87/352 (24%)

Query: 60  CGFA--LATSESGKLITWGSADDEGQSYLTSGKHGE------TPEPFPLPTEASVVKAAA 111
           CG A  LA S +G++ +WG+  D GQ  L  GKH E      TP+   +  E      A 
Sbjct: 181 CGMAHTLALSVNGEIYSWGAGAD-GQ--LGVGKHQEETADVATPQKVRVDEEEKFEFIAC 237

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDK 170
           G  HC+++T+   +++WG              G+ G     DS  + S  PT        
Sbjct: 238 GSRHCMAITDDCRLFSWG-------------LGADGRLGLGDSESRFS--PT-------- 274

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
                 V RR   + R                           I  VAAGG HT +LSD 
Sbjct: 275 ------VVRRSIENLR---------------------------ICYVAAGGHHTAVLSDN 301

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G+++  G G  GQLG G        P L   L+ A + +   LL+    +          
Sbjct: 302 GEIFTCGRGSYGQLGHGD-----ADPQLT--LKKARALRHGCLLLHIVQLRD------KK 348

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           + + ACG  H+ V++ AG +  +G    GQ G G T     P   +SL  + V  ++ GL
Sbjct: 349 IIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTGGTEGANSPVELTSLRGL-VGDVSCGL 407

Query: 351 WHTVCISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            H+  + ++    +F   ++  +L   + +     +  E  +   +R+++V+
Sbjct: 408 VHSAAVPMQ----IFAVSSKIAELEDVIQRLSTSLRTAEMQVQAERRSRLVA 455


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 133/264 (50%), Gaps = 25/264 (9%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P ++T      I +V+ G  H L+++D  QV+ WGY   GQLG                L
Sbjct: 75  PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLG--------------HTL 120

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           E   +   RP +V++ S           + ++ACGG+HS  +++ G + ++G   +GQ G
Sbjct: 121 EAGGNNSRRPRMVKELS--------SLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLG 172

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            GST +Q +P   +SL  I   QI AG  H+  +S  G V+ FG N FGQLG G      
Sbjct: 173 IGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRK 232

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLV 441
            P  +++  L S +   +SCG  H+AVLT DG VL++G   YGQLG   +    +P  + 
Sbjct: 233 YPTHVKS--LRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVF 290

Query: 442 PIHGFLPRNIACGWWHTLLLAETT 465
            + G     +ACG  HT+   E++
Sbjct: 291 ELMGLEVTQLACGRMHTMAYVESS 314



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 109/219 (49%), Gaps = 30/219 (13%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL---- 258
           P +V     ++I +VA GG+H+L LS+ G+++ WG    GQLG+GS  K  P P      
Sbjct: 130 PRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGS-TKNQPKPQELTSL 188

Query: 259 --IPCLEHAASGKDRPLLVRQGSV-----NSSGKAG------RSY-----------VKEI 294
             IP  +  A G    +L + G+V     N+ G+ G      R Y           V  I
Sbjct: 189 TGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHI 248

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           +CG  H+AV+T  G +LTFG G YGQ GH S N +  P     LM ++V Q+A G  HT+
Sbjct: 249 SCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTM 308

Query: 355 C-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
             +   GR+Y FG    GQLG+      N P  ++ P +
Sbjct: 309 AYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFV 347



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 99/178 (55%), Gaps = 8/178 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           ++E++CG +H+  V   G + T G   YGQ G    +   RP+  ++L    ++Q++ G 
Sbjct: 36  MREVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHK--RPTVITALDTQSIQQVSCGD 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---VPKLLETPILESKRAKVVSCGARHS 407
           +H + ++ + +V+ +G +  GQLG  ++   N    P++++   L S +   V+CG +HS
Sbjct: 94  YHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKE--LSSLQIVQVACGGKHS 151

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAET 464
             L+ DG++ SWG N +GQLG+G + ++  P  L  + G     I  G  H+ +L+++
Sbjct: 152 LALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKS 209



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
           + +++ G  HTV +  EG VY  G N +GQLG   D+    P ++    L+++  + VSC
Sbjct: 36  MREVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQ--DKGHKRPTVITA--LDTQSIQQVSC 91

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLG----LGDSIDRNIPSLVPIHGFLPRNIACGWWHT 458
           G  H+ V+ +  QV SWG++  GQLG     G +  R    +  +       +ACG  H+
Sbjct: 92  GDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHS 151

Query: 459 LLLAETTQI 467
           L L+   +I
Sbjct: 152 LALSNDGRI 160



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           ++ +G  + G+LG G  + + +    E P   +K  + VSCG +H+  +  +G V + G 
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 422 NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           N YGQLG      R  P+++  +     + ++CG +H L++ +  Q+
Sbjct: 61  NDYGQLGQDKGHKR--PTVITALDTQSIQQVSCGDYHNLVVNDKYQV 105


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 140/275 (50%), Gaps = 29/275 (10%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD  +   P L     G  IT V  G  HT  +S  G ++ WG G  G+LG G+      
Sbjct: 42  GDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGGGMYGKLGHGNE----- 96

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       SG   P  V     +  G A    V +IACG RH+A+VT  G L T+G
Sbjct: 97  ------------SGHSTPKRVD----SLVGLA----VVDIACGSRHTAIVTSRGCLYTWG 136

Query: 315 WGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
               G  GHG T   Q  P     L   +V Q++A  +HT C++  G VY +G  +FG+L
Sbjct: 137 DKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRL 196

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
           G G ++  + P+L+ET  L  KR   +SCG  HSAV+T DG++ ++G  ++GQLG GD +
Sbjct: 197 GHGAERNCHSPRLVET--LLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKV 254

Query: 434 DRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           ++  P+LV  + G     I CGW H++ L  + ++
Sbjct: 255 NKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEV 289



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 156/365 (42%), Gaps = 61/365 (16%)

Query: 67  SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGE 124
           +  G + TWG  DD     L  G +G    P    + A   +     G  H  +V+  G 
Sbjct: 23  THGGGVYTWGRGDD---GRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGN 79

Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS-------DKRAGEE-- 175
           ++TWG                 G + K   G +S   T +   S       D   G    
Sbjct: 80  LFTWG----------------GGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHT 123

Query: 176 -VVKRRKTSSAREESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
            +V  R       + EN  +G    E    +P L+    G ++ +++A G HT  L+D G
Sbjct: 124 AIVTSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAG 183

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           +V+ WG G  G+LG G+  +   +P L+  L     GK RP+                  
Sbjct: 184 EVYTWGEGKFGRLGHGAE-RNCHSPRLVETL----LGK-RPV------------------ 219

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
            +I+CGG HSAVVT  G + TFG G +GQ GHG   ++++P+    L  + + QI  G  
Sbjct: 220 -QISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWS 278

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           H+V ++    VY +G    G+LG G  +  + P+L+E   L  ++   V+    H+A L 
Sbjct: 279 HSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEK--LVGQKVVCVASYNEHTACLV 336

Query: 412 EDGQV 416
           E   V
Sbjct: 337 EPHSV 341



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 26/247 (10%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+E    +P  V    G+ +  +A G RHT I++  G ++ WG    G  G G       
Sbjct: 94  GNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTEGHQY 153

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           TP L+  L                       +G+  V+  ACG  H+  +TDAG + T+G
Sbjct: 154 TPKLLERL-----------------------SGKRVVQLSACG-FHTGCLTDAGEVYTWG 189

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G +G+ GHG+  +   P    +L+  +  QI+ G +H+  ++ +G++Y FGG + GQLG
Sbjct: 190 EGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLG 249

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G    +  P L++   L+      ++CG  HS  LT   +V +WG   +G+LG G    
Sbjct: 250 HGDKVNKVKPTLVKD--LDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKK 307

Query: 435 RNIPSLV 441
            + P LV
Sbjct: 308 VSTPQLV 314


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 129/252 (51%), Gaps = 28/252 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           +  ++AG  HT+ L     V  WG G +GQLG G          L+P    A  G+D   
Sbjct: 14  VLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGD-----TDDRLLPTKLSAFDGQD--- 65

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTNDQLRP 332
                            +  + CG  ++   + +G  + ++GWG +G+ GHG  +D   P
Sbjct: 66  -----------------IVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIP 108

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               +L  ++++QI+ G  H + +++E +V  +G NQ G+LG G  +  +VP+  +    
Sbjct: 109 HPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQ--KILAF 166

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA 452
           E  R K+V+ GA HS  +TEDG +  WGW +YG LGLGD+ DR IP  V I G     ++
Sbjct: 167 EGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVS 226

Query: 453 CGWWHTLLLAET 464
           CGW HT+ ++ +
Sbjct: 227 CGWRHTISISSS 238



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 29/257 (11%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ-VWGWGYGGEGQL 244
           R E      GD    L P  ++   G  I  V  G  +T+  S  G+ V+ WG+G  G+L
Sbjct: 38  RGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRL 97

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G G      P+   IP           P+   QG            +K+I+CG  H   V
Sbjct: 98  GHGD-----PSDLFIP----------HPIRALQGL----------RIKQISCGDCHCLAV 132

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
           T    +L++G    G+ G G+T D   P    +   I+++ +AAG  H+V I+ +G +Y 
Sbjct: 133 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYG 192

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G  ++G LG G      +P   E   ++  +  +VSCG RH+  ++  G + + GW+KY
Sbjct: 193 WGWGRYGNLGLGDTNDRLIP---EKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKY 249

Query: 425 GQLGLGDSIDRNIPSLV 441
           GQLG GD  D  +P  V
Sbjct: 250 GQLGHGDFEDCLVPRKV 266



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 111/269 (41%), Gaps = 50/269 (18%)

Query: 91  HGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDF 143
           HG+T +   LPT+ S      +V    G  + V+ +++G +VY+WGW           DF
Sbjct: 46  HGDTDDRL-LPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG----------DF 94

Query: 144 GSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
           G  G       F          L  +Q    D       ++ +  S  R ++     G  
Sbjct: 95  GRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTT 154

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
             +  P  +    G++I  VAAG  H++ +++ G ++GWG+G  G LGLG          
Sbjct: 155 KDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGD-----TNDR 209

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           LIP                   VN  G      +  ++CG RH+  ++ +G L T GW  
Sbjct: 210 LIP-----------------EKVNIDGDK----IVMVSCGWRHTISISSSGGLYTHGWSK 248

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
           YGQ GHG   D L P    +L D  + Q+
Sbjct: 249 YGQLGHGDFEDCLVPRKVQALSDKLISQV 277


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 143/285 (50%), Gaps = 36/285 (12%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASG 268
           +I +V  GG H+ +++  G++  WGYGG GQLGLG  +K +  P ++  +++    + S 
Sbjct: 43  RIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGD-LKDIVIPRVMTSIKNVINVSCSD 101

Query: 269 KDRPLLVRQGSV-----NSSGKAG-----------------------RSYVKEIACGGRH 300
           +    ++  G +     N SGK G                          V +++CG  H
Sbjct: 102 RHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFH 161

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           +A +TD     T+G G+ G+ GHG TND   P    SL  + V+ I  G  HT  +   G
Sbjct: 162 TACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNG 221

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           +VY  GG  FG+LG G  +   +PKLL+   L +K  K VS G +HSAV+T  G+V +WG
Sbjct: 222 KVYFCGGGAFGKLGFGSKEDIYIPKLLQGS-LTNKSIKEVSLGYQHSAVITTKGKVYTWG 280

Query: 421 W-NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
              + G +  G   D   P LV  ++  +  NI+CG  HT++++ 
Sbjct: 281 QGGRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISN 325



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 131/267 (49%), Gaps = 35/267 (13%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P LV      K+ KV+ G  HT  L+D+ + + WG G +G+LG G     V TP LI  
Sbjct: 140 TPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDT-NDVYTPKLIES 198

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           L                       AG S VK I CGG H+A++ + G +   G G +G+ 
Sbjct: 199 L-----------------------AGLS-VKNIVCGGHHTAILLNNGKVYFCGGGAFGKL 234

Query: 322 GHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFG-GNQFGQLGTGVDQ 379
           G GS  D   P     SL +  +++++ G  H+  I+ +G+VY +G G + G +  G + 
Sbjct: 235 GFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQGGRLGHIYNGPEP 294

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
               PKL+E   L S  A  +SCG  H+ V++  G V +WG  +    G+ DS   N P+
Sbjct: 295 DILSPKLVEK--LNSIIAVNISCGHSHTVVISNIGDVYAWGVTRNLGHGVIDS-KPNDPT 351

Query: 440 LVPIHGFLPRNI---ACGWWHTLLLAE 463
           L PI     +NI   +CG  HT+ L++
Sbjct: 352 LHPI--LQNKNIVQVSCGKTHTIALSD 376



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 170/401 (42%), Gaps = 64/401 (15%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
           G   E+S I   +   L   +  K+VC GG   A+ T  SG+LI WG     G   L  G
Sbjct: 22  GAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVIT-HSGELIVWGYG---GCGQLGLG 77

Query: 90  KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
              +   P  + +  +V+  +    H  ++ E G +YTWG   C  S K+       GS 
Sbjct: 78  DLKDIVIPRVMTSIKNVINVSCSDRHSAAILEDGRLYTWG---CNKSGKL-----GIGSL 129

Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS--SAREESENPA------------SG 195
             +        P       +K   E+V+K    S  +A     N A             G
Sbjct: 130 NVNLNNNIICTP----QLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHG 185

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           D     +P L+    G+ +  +  GG HT IL + G+V+  G G  G+LG GS+ + +  
Sbjct: 186 DTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSK-EDIYI 244

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
           P L+                 QGS+ +        +KE++ G +HSAV+T  G + T  W
Sbjct: 245 PKLL-----------------QGSLTNKS------IKEVSLGYQHSAVITTKGKVYT--W 279

Query: 316 GLYGQCGH---GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G  G+ GH   G   D L P     L  I    I+ G  HTV IS  G VY +G  +   
Sbjct: 280 GQGGRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGVTR--N 337

Query: 373 LGTGV-DQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           LG GV D   N P L   PIL++K    VSCG  H+  L++
Sbjct: 338 LGHGVIDSKPNDPTL--HPILQNKNIVQVSCGKTHTIALSD 376



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 100/184 (54%), Gaps = 11/184 (5%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +KE+ CGG HSAV+T +G L+ +G+G  GQ G G   D + P   +S+ +  V  ++   
Sbjct: 44  IKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMTSIKN--VINVSCSD 101

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN------VPKLLETPILESKRAKVVSCGA 404
            H+  I  +GR+Y +G N+ G+LG G             P+L+E  +L  K  KV SCG+
Sbjct: 102 RHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVE-KLLNEKVIKV-SCGS 159

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
            H+A LT+  +  +WG    G+LG GD+ D   P L+  + G   +NI CG  HT +L  
Sbjct: 160 FHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLN 219

Query: 464 TTQI 467
             ++
Sbjct: 220 NGKV 223



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 4/107 (3%)

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           V+  V  +G +++GQLG   +++   PKL+E+ +    R K V CG  HSAV+T  G+++
Sbjct: 6   VKSGVVAWGSSEYGQLGAIYEESNIEPKLIES-LYSFNRIKEVCCGGHHSAVITHSGELI 64

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
            WG+   GQLGLGD  D  IP ++  I   +  N++C   H+  + E
Sbjct: 65  VWGYGGCGQLGLGDLKDIVIPRVMTSIKNVI--NVSCSDRHSAAILE 109


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 136/262 (51%), Gaps = 31/262 (11%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAAS 267
           +P   +  V+AG  H++ L     +  WG G +GQLG G +  ++VPT           S
Sbjct: 10  SPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPT---------VLS 60

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGST 326
           G D P                  +  + CG  H+ A   D   + ++GWG +G+ GHG++
Sbjct: 61  GFDAPA-----------------ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS 103

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
           +D   P    +L  ++++QIA G  H + +++ G V  +G NQ GQLG G  +   +P+ 
Sbjct: 104 SDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQK 163

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHG 445
           ++    ES   K+++ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V  + G
Sbjct: 164 IQA--FESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEG 221

Query: 446 FLPRNIACGWWHTLLLAETTQI 467
                +ACGW HT+ ++++  +
Sbjct: 222 EKMVLVACGWRHTITVSDSGNL 243



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 123/251 (49%), Gaps = 27/251 (10%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+     +P  V    G+KI ++A G  H L ++  G+V  WG    GQLGLG+    + 
Sbjct: 101 GNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSL- 159

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P  I   E                           VK IA G  H+A VT+ G L  +G
Sbjct: 160 LPQKIQAFESVC------------------------VKMIAAGAEHTAAVTEDGDLYGWG 195

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG YG  G G  ND+L P   SS+   ++  +A G  HT+ +S  G +Y +G +++GQLG
Sbjct: 196 WGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLG 255

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G  +   VP  +E   L+      +S G RH+  LT +G++  WGWNK+GQ+G+G++ D
Sbjct: 256 HGDFEDHLVPHKVEA--LKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDD 313

Query: 435 RNIPSLVPIHG 445
            + P  V   G
Sbjct: 314 HSSPGQVSFPG 324



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 145/345 (42%), Gaps = 55/345 (15%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA------G 112
           G   ++A      L +WG  +D GQ       HG+  +   +PT  S   A A      G
Sbjct: 21  GASHSVALLTGNVLCSWGRGED-GQL-----GHGDAEDRL-VPTVLSGFDAPAITSVICG 73

Query: 113 WAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQA 165
             H  + +E   +VY+WGW           DFG  G       F          L  +Q 
Sbjct: 74  ADHTTAYSEDELQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGLKIKQI 123

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
              D       +     S  R ++     G    +L P  +     V +  +AAG  HT 
Sbjct: 124 ACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTA 183

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            +++ G ++GWG+G  G LGLG R                    DR L  +  SV     
Sbjct: 184 AVTEDGDLYGWGWGRYGNLGLGDR-------------------NDRLLPEKVSSVE---- 220

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
            G   V  +ACG RH+  V+D+G L T+GW  YGQ GHG   D L P    +L D  + Q
Sbjct: 221 -GEKMVL-VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQ 278

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
           I+ G  HT+ ++ EG++Y +G N+FGQ+G G +   + P  +  P
Sbjct: 279 ISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFP 323


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 143/288 (49%), Gaps = 38/288 (13%)

Query: 208 LNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH- 264
           L P  K+ +V+   G  H L+++  GQV+  G    GQLGLGS  KM P+  L+  L+H 
Sbjct: 130 LPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGS-TKMSPSLLLVESLKHV 188

Query: 265 -----AASGKDRPLLVRQGS-----VNSSGKAGR-----------------SYVKEIACG 297
                + S     ++   GS     +N  G+ G                    V+  ACG
Sbjct: 189 RVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACG 248

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
             H+  +T+ G + + G  L GQ G GS +    P+  ++L +     IA G  HT  + 
Sbjct: 249 QYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVL 308

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
            +G+++ FG N  GQLG G   + + P  +ET  L + +   +SCG   + VL+E G++ 
Sbjct: 309 EDGKLFTFGYNHQGQLGLGHTDSVSSPMQVET--LRNVKVVKISCGTHFTCVLSESGELW 366

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLA 462
           S+G N +GQLGLGDS DR +P LVP      +N   IACG+ H + ++
Sbjct: 367 SFGCNCHGQLGLGDSTDRLVPVLVP--SMTKKNLSEIACGFHHLVAIS 412



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 14/161 (8%)

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G    G+ GH +  +Q+  S   SL   ++ ++AAG   +  ++ EG+VY  G N  GQL
Sbjct: 46  GQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLNSTGQL 105

Query: 374 GTGVDQ-AENVPKLLETPI--LE----SKRAKVVSC--GARHSAVLTEDGQVLSWGWNKY 424
                Q + N  K   + I  +E      +   VSC  GA H  V+T  GQV S G N +
Sbjct: 106 ARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNH 165

Query: 425 GQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLLLA 462
           GQLGLG +  +  PSL+ +       +   +C + H+++++
Sbjct: 166 GQLGLGST--KMSPSLLLVESLKHVRVLSASCSYHHSVVVS 204


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/248 (36%), Positives = 127/248 (51%), Gaps = 31/248 (12%)

Query: 216  KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            K+AAG  H L L+  G VW WGY  +GQLGLGS                  S K+RP  +
Sbjct: 1037 KIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTY--------------STKNRPQKI 1082

Query: 276  RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                         S V  IACGG HS  V   G+L ++G+  YGQ G G    +  P   
Sbjct: 1083 N----------AISNVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV 1132

Query: 336  SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
            +++ +  V  IAAG ++++ ++ +G V+ +G N  GQLG G ++  N P+ +E  +L + 
Sbjct: 1133 NAISN--VAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVE--VLSNV 1188

Query: 396  RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
             A  ++ G  HS  LT DG V SWG N  GQLGL D+ DRN P  V     + + IA G 
Sbjct: 1189 AA--IAAGEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNI-KAIAAGN 1245

Query: 456  WHTLLLAE 463
             H+  ++E
Sbjct: 1246 SHSFAISE 1253



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 192/448 (42%), Gaps = 59/448 (13%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA +  G L  WG+    G   L +    +   P  + + ++ V  A G  H +++   
Sbjct: 329 SLALTSDGVLWAWGN---NGDGRLGTDATSDQSLPAQVSSISNAVSFAGGQRHSLAIAAD 385

Query: 123 GEVYTWGWR--------ECVPSAKVT--RDFGSAGSFQ--KDSTGKQSALPTEQAPPSDK 170
           G V++WG             P++ +T      S   F    D+ G  +A   +     D 
Sbjct: 386 GSVWSWGGNAYGQLGVESLTPASVLTPVHTLYSGEDFHLFYDTDGDGAANIWDDDDDGDG 445

Query: 171 RAGEEVVKRRKTSSAREESENPASGD-------EFFTLSPCLVTLNPGVKITKVAAGGRH 223
              E       ++  +E+ +   +GD       +FF + P       G     VAAGG  
Sbjct: 446 FLDESDNCPCVSNPGQEDEDGDGTGDFCDGCPGDFFKIQPGFSGC--GNPNPMVAAGGGF 503

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAAS----GKDRPLLVRQG 278
           +L L   G VW WG  G GQLGLG      V TP  +  L  AAS    G     L   G
Sbjct: 504 SLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPLAASIAAGGGHALALASDG 563

Query: 279 SVNSSGKA-----------------------GRSYVKEIACGGRHSAVVTDAGALLTFGW 315
           SV S G+                          S V  IACGG HS  +   G+  ++G+
Sbjct: 564 SVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACGGSHSLALARDGSFWSWGY 623

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
             YGQ G G    +  P   ++L ++    +AAG  H++ ++++G ++ +G N +GQLG 
Sbjct: 624 NYYGQLGLGDNVSKTTPRKVNALSNVVA--MAAGDRHSLALTLDGSLWSWGDNTYGQLGL 681

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G +   N P+ +            ++ G RHS  LT DG V SWG N  GQLGLGD+ DR
Sbjct: 682 GDNDHRNTPRKVNAI----SNVVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDR 737

Query: 436 NIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           N P  V     + + IA G  +++ ++E
Sbjct: 738 NTPQPVTTISNI-KAIAVGNNYSIAISE 764



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 121/259 (46%), Gaps = 37/259 (14%)

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
           +N    +  +A GG H+L L+  G  W WGY   GQLGLG  +    TP  +  L     
Sbjct: 593 INAISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKT-TPRKVNAL----- 646

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
                                S V  +A G RHS  +T  G+L ++G   YGQ G G  +
Sbjct: 647 ---------------------SNVVAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDND 685

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
            +  P   +++ ++    IAAG  H++ ++ +G V+ +G N  GQLG G +   N P+  
Sbjct: 686 HRNTPRKVNAISNVVA--IAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQ-- 741

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS---IDRNIPSLVPIH 444
             P+      K ++ G  +S  ++E+G V +WG+N  GQLG+G      D N P  V + 
Sbjct: 742 --PVTTISNIKAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKVIVI 799

Query: 445 GFLPRNIACGWWHTLLLAE 463
             +   ++ G  H++ L E
Sbjct: 800 SNV-VGLSAGSSHSIALTE 817



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 117/259 (45%), Gaps = 37/259 (14%)

Query: 208  LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
            +N    +  +A GG H+L ++  G +W WGY   GQLGLG       TP  +  +     
Sbjct: 1082 INAISNVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKT-TPQKVNAI----- 1135

Query: 268  GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
                                 S V  IA G  +S  +T  G++ ++G    GQ G G   
Sbjct: 1136 ---------------------SNVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNE 1174

Query: 328  DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
            D+  P     L +  V  IAAG  H++ ++ +G V+ +G N  GQLG   +   N P+  
Sbjct: 1175 DRNTPQKVEVLSN--VAAIAAGEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQ-- 1230

Query: 388  ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS---IDRNIPSLVPIH 444
              P+      K ++ G  HS  ++E+G   +WG+N  GQLG+G S    + N P  V + 
Sbjct: 1231 --PVTTISNIKAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVI 1288

Query: 445  GFLPRNIACGWWHTLLLAE 463
              +   ++ G +H+L L E
Sbjct: 1289 SNV-VGLSGGNYHSLALTE 1306



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 157/377 (41%), Gaps = 50/377 (13%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHC 116
            G  F+LA    G L +WG   D G   L  G         P   +A     K AAG  H 
Sbjct: 989  GGNFSLALKTDGSLWSWG---DNGTGQLGLGLGQSVNVFTPTKVDALPPAAKIAAGDNHA 1045

Query: 117  VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ-KDSTGKQSALPTEQAPPSDKRAGEE 175
            +++   G V++WG+     ++      GS+G++  K+   K +A+    A          
Sbjct: 1046 LALAPDGSVWSWGY-----NSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLA 1100

Query: 176  VVKRRKT-SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
            V +     S           GD +   +P  V  N    +  +AAG  ++L L+  G VW
Sbjct: 1101 VARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV--NAISNVAAIAAGEYYSLALTRDGSVW 1158

Query: 235  GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
             WG   +GQLGLG   +   TP  +  L                          S V  I
Sbjct: 1159 SWGDNSDGQLGLGDN-EDRNTPQKVEVL--------------------------SNVAAI 1191

Query: 295  ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
            A G  HS  +T  G++ ++G    GQ G    +D+  P   +++ +I+   IAAG  H+ 
Sbjct: 1192 AAGEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKA--IAAGNSHSF 1249

Query: 355  CISVEGRVYVFGGNQFGQLGTGVDQA---ENVPKLLETPILESKRAKVVSCGARHSAVLT 411
             IS EG  + +G N  GQLG G   +   EN P+ ++           +S G  HS  LT
Sbjct: 1250 AISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVI----SNVVGLSGGNYHSLALT 1305

Query: 412  EDGQVLSWGWNKYGQLG 428
            EDG + +WG N  GQ+G
Sbjct: 1306 EDGALWAWGDNDDGQIG 1322



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 164/389 (42%), Gaps = 62/389 (15%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF------PLPTEASVVKAAAG 112
           G GF+LA    G + +WG+      S       GE  + F       LP  AS+   AAG
Sbjct: 500 GGGFSLALKTDGSVWSWGN----NGSGQLGLGLGENDDVFTPTNVDALPLAASI---AAG 552

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
             H +++   G V++WG R  V    +      +    ++   K +A+    A       
Sbjct: 553 GGHALALASDGSVWSWG-RNSVGQLGLGTGGTYS---TENRPQKINAISNVAAIAC---G 605

Query: 173 GEEVVKRRKTSSAREESENPAS----GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           G   +   +  S      N       GD     +P  V  N    +  +AAG RH+L L+
Sbjct: 606 GSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKV--NALSNVVAMAAGDRHSLALT 663

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
             G +W WG    GQLGLG       TP  +  +                          
Sbjct: 664 LDGSLWSWGDNTYGQLGLGDN-DHRNTPRKVNAI-------------------------- 696

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           S V  IA G RHS  +T  G++ ++G    GQ G G  +D+  P   +++ +I+   IA 
Sbjct: 697 SNVVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKA--IAV 754

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA---ENVPKLLETPILESKRAKVVSCGAR 405
           G  +++ IS EG V+ +G N  GQLG G   +   EN P+     ++       +S G+ 
Sbjct: 755 GNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQ----KVIVISNVVGLSAGSS 810

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
           HS  LTEDG + +WG N+ GQ+   ++I+
Sbjct: 811 HSIALTEDGALWAWGNNEAGQIAAEEAIE 839



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 118/278 (42%), Gaps = 40/278 (14%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R +      GD+   L+P    +     I  VAAG   +L L+  G +W WG    GQLG
Sbjct: 93  RNDYNQLGLGDDINRLAPEQAPVVS--NIVSVAAGRLFSLALASDGSLWAWGGNYYGQLG 150

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           +G     + TP   P                          G S V  IA G  H+   T
Sbjct: 151 MGDNDNRL-TPSKTP--------------------------GLSDVAAIAGGDYHALAAT 183

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
            +G +   G   +GQ G   T D    P   + L +  V+ +AAG + ++ +  +G V+ 
Sbjct: 184 QSGEVWAMGRNDHGQLGF--TGDHADAPVQVAGLSN--VKSVAAGEFFSLALKNDGTVWA 239

Query: 365 FGGNQFGQLGTGV-DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
           +G N+  QLGTG+  +A   P     PI        ++ G RH+  L EDG V +WG N 
Sbjct: 240 WGNNESAQLGTGIAGEAVATP----APIAVLSNITAIAAGRRHAMALAEDGSVWAWGANG 295

Query: 424 YGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
            GQLG GD      P  V     +   IA GW+H+L L
Sbjct: 296 SGQLGFGDFETPKAPGRVSSLADVTA-IASGWFHSLAL 332



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 146/357 (40%), Gaps = 77/357 (21%)

Query: 32  SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY--LTSG 89
           +PE++P++S I +              G  F+LA +  G L  WG     G  Y  L  G
Sbjct: 109 APEQAPVVSNIVS-----------VAAGRLFSLALASDGSLWAWG-----GNYYGQLGMG 152

Query: 90  KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
            +     P   P  + V   A G  H ++ T++GEV+  G            D G  G  
Sbjct: 153 DNDNRLTPSKTPGLSDVAAIAGGDYHALAATQSGEVWAMG----------RNDHGQLGF- 201

Query: 150 QKDSTGKQSALPTEQAPPSDKR---AGEEV---VKRRKTSSAREESENPA-----SGDEF 198
               TG  +  P + A  S+ +   AGE     +K   T  A   +E+       +G+  
Sbjct: 202 ----TGDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAV 257

Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            T +P  V  N    IT +AAG RH + L++ G VW WG  G GQLG G   +    P  
Sbjct: 258 ATPAPIAVLSN----ITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFGD-FETPKAPGR 312

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           +  L                            V  IA G  HS  +T  G L  +G    
Sbjct: 313 VSSLAD--------------------------VTAIASGWFHSLALTSDGVLWAWGNNGD 346

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           G+ G  +T+DQ  P+  SS+ +      A G  H++ I+ +G V+ +GGN +GQLG 
Sbjct: 347 GRLGTDATSDQSLPAQVSSISN--AVSFAGGQRHSLAIAADGSVWSWGGNAYGQLGV 401



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 133/293 (45%), Gaps = 46/293 (15%)

Query: 186  REESENPASGD-------EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
            +E+ +   +GD       +FF   P       G     VAAGG  +L L   G +W WG 
Sbjct: 950  QEDEDGDGTGDFCDGCPGDFFKSQPGFSGC--GNPNPMVAAGGNFSLALKTDGSLWSWGD 1007

Query: 239  GGEGQLGLGSRIKM-VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
             G GQLGLG    + V TP  +  L  AA                          +IA G
Sbjct: 1008 NGTGQLGLGLGQSVNVFTPTKVDALPPAA--------------------------KIAAG 1041

Query: 298  GRHSAVVTDAGALLTFGWGLYGQCGHGST---NDQLRPSYASSLMDIQVEQIAAGLWHTV 354
              H+  +   G++ ++G+   GQ G GS+   + + RP   +++ +  V  IA G  H++
Sbjct: 1042 DNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISN--VAAIACGGSHSL 1099

Query: 355  CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
             ++ +G ++ +G N +GQLG G + ++  P+ +            ++ G  +S  LT DG
Sbjct: 1100 AVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAI----SNVAAIAAGEYYSLALTRDG 1155

Query: 415  QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
             V SWG N  GQLGLGD+ DRN P  V +   +   IA G  H+L L     +
Sbjct: 1156 SVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAA-IAAGEDHSLALTRDGSV 1207



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 5/122 (4%)

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           +A+ L H++ +  +G V+V+G N + QLG G D     P+  + P++ +  +  V+ G  
Sbjct: 72  VASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPE--QAPVVSNIVS--VAAGRL 127

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETT 465
            S  L  DG + +WG N YGQLG+GD+ +R  PS  P    +   IA G +H L   ++ 
Sbjct: 128 FSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAA-IAGGDYHALAATQSG 186

Query: 466 QI 467
           ++
Sbjct: 187 EV 188



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 52/297 (17%)

Query: 27  YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL 86
           Y     P+K   +S + A  CGG             +LA +  G   +WG  +  GQ  L
Sbjct: 584 YSTENRPQKINAISNVAAIACGG-----------SHSLALARDGSFWSWGY-NYYGQ--L 629

Query: 87  TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
             G +     P  +   ++VV  AAG  H +++T  G +++WG              G  
Sbjct: 630 GLGDNVSKTTPRKVNALSNVVAMAAGDRHSLALTLDGSLWSWG-------DNTYGQLGLG 682

Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-GDEFFTLSPCL 205
            +  +++  K +A+    A  +  R    + +     S    +      GD     +P  
Sbjct: 683 DNDHRNTPRKVNAISNVVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQP 742

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP--TPHLIPCLE 263
           VT    +K   +A G  +++ +S+ G VW WGY   GQLG+G+   +    TP  +  + 
Sbjct: 743 VTTISNIK--AIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKVIVI- 799

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                                    S V  ++ G  HS  +T+ GAL  +G    GQ
Sbjct: 800 -------------------------SNVVGLSAGSSHSIALTEDGALWAWGNNEAGQ 831



 Score = 38.1 bits (87), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 14/101 (13%)

Query: 31   TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
             +P+K  +LS + A   G D            +LA +  G + +WG  +  GQ  L    
Sbjct: 1177 NTPQKVEVLSNVAAIAAGED-----------HSLALTRDGSVWSWGR-NSRGQLGLDDND 1224

Query: 91   HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
               TP+P  + T +++   AAG +H  +++E G  + WG+ 
Sbjct: 1225 DRNTPQP--VTTISNIKAIAAGNSHSFAISEEGLAWAWGYN 1263


>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 900

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 208/504 (41%), Gaps = 109/504 (21%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
           G + EK  +   +   L G       CG     +LA +E G + ++G    EGQ      
Sbjct: 15  GHALEKDHLDPSVIQNLSGMRIVMSACGEA--HSLAVTEFGDVYSFGRGR-EGQLGHPEK 71

Query: 90  KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG-WRECVPSAKVTRDFGSAGS 148
            +   P          + + A G  H +++T+ G++Y WG   E   SAK       +G 
Sbjct: 72  YNTAHPNVITALAHERITRVACGNFHSLALTDTGKIYEWGQLHEIDKSAKGLE--APSGL 129

Query: 149 FQKDSTGKQSALPTE---QAPPSDKRAGEEVVKR----RKTSSAREESENPASGDEFF-- 199
            +    G  S +  +   Q    DK A +   K        S+  E++E+  + DE F  
Sbjct: 130 IEMKGIGFASRIAEQSLSQYLSGDKAAYDPTSKNISNVNSQSAQNEDAEDLTNKDEEFDA 189

Query: 200 -------------------------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
                                     L+P LV      ++  ++AG  ++  ++  G+V+
Sbjct: 190 AAGSGGDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVF 249

Query: 235 GWGYGGEGQLGLGSR--------IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
            WG+  +GQLGLG R        +K     H++                           
Sbjct: 250 TWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIV--------------------------- 282

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL-----MDI 341
                  ++CG +H  V++D G L T+G G++GQ GHG     L P    +      ++ 
Sbjct: 283 ------SVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFSEADQLNQ 336

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAEN------------------ 382
           +V Q+A G   T+ ++V+GR++ FG  ++GQLG T  +Q  +                  
Sbjct: 337 KVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGNGNEREAHLQY 396

Query: 383 -VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            VP+ +E   L S + K V+CG  H+ V+TED  V SWGW   G LG GD   + +P  V
Sbjct: 397 AVPQQVEA--LASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGFGDRKFQLVPQRV 454

Query: 442 P-IHGFLPRNIACGWWHTLLLAET 464
           P + G +  +I+ G  H+L++  T
Sbjct: 455 PALSGEIVSSISAGEKHSLVVRST 478



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 2/112 (1%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           ++++FG     Q GH    D L PS   +L  +++   A G  H++ ++  G VY FG  
Sbjct: 2   SVISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRG 61

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           + GQLG         P ++    L  +R   V+CG  HS  LT+ G++  WG
Sbjct: 62  REGQLGHPEKYNTAHPNVITA--LAHERITRVACGNFHSLALTDTGKIYEWG 111



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 5/108 (4%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           V  FG N+  QLG  +++    P +++   L   R  + +CG  HS  +TE G V S+G 
Sbjct: 3   VISFGVNKQSQLGHALEKDHLDPSVIQN--LSGMRIVMSACGEAHSLAVTEFGDVYSFGR 60

Query: 422 NKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
            + GQLG  +  +   P+++    H  + R +ACG +H+L L +T +I
Sbjct: 61  GREGQLGHPEKYNTAHPNVITALAHERITR-VACGNFHSLALTDTGKI 107


>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
 gi|194706180|gb|ACF87174.1| unknown [Zea mays]
          Length = 391

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 170/419 (40%), Gaps = 97/419 (23%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  E G+L TWG        +    K   +P P        +V+AA G  HC++V + 
Sbjct: 53  SLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDN 112

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G  Y WG  E          +G  G                   P  K  G   ++R   
Sbjct: 113 GHAYAWGGNE----------YGQCGE-----------------EPERKEDGTRALRRDIP 145

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
           +  R                       P +K+ +VAAGG H+++L+  G VW WG     
Sbjct: 146 TPQR---------------------CAPKLKVRQVAAGGTHSVVLTQEGHVWTWG----- 179

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           Q      IK + TP  +  LE                           V+ IA G  H+ 
Sbjct: 180 QPWPPGDIKQISTPVRVQGLEK--------------------------VRVIAVGAFHNL 213

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +T+ G L  +G   YGQ G G T  +  P     L D+ +  IAAG WH+  ++++G V
Sbjct: 214 ALTEDGILWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEV 273

Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           Y +G  + G+LG G D++   VP  L+  +L  +    VSCG  HS  LT DG++ S+G 
Sbjct: 274 YAWGRGEHGRLGFGDDKSSRMVP--LKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYGR 331

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRN------------IACGWWHTLLL---AETT 465
             +G+LG G  +    P  V I    P+             +ACG  HTL +   AETT
Sbjct: 332 GDHGRLGYGRKLTTGQPMGVDIDLPPPKTRSSRDGQWQAKYVACGGRHTLAIVVWAETT 390



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 112/283 (39%), Gaps = 79/283 (27%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V  WG G +GQLG+G   +     H +  L                        G   V 
Sbjct: 10  VLAWGSGEDGQLGMGGN-EEKDWAHCVEAL------------------------GSYAVT 44

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLW 351
            +  G R+S  + + G L T+GW   G  GH   T  +  P    +L  +++ Q A G W
Sbjct: 45  AVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGW 104

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---------------VPKL---------- 386
           H + +   G  Y +GGN++GQ G   ++ E+                PKL          
Sbjct: 105 HCLAVDDNGHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGT 164

Query: 387 -------------------------LETPILES--KRAKVVSCGARHSAVLTEDGQVLSW 419
                                    + TP+     ++ +V++ GA H+  LTEDG + +W
Sbjct: 165 HSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAW 224

Query: 420 GWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
           G N+YGQLG GD+  R+ P  V  +      +IA G WH+  L
Sbjct: 225 GNNEYGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTAL 267



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 136/379 (35%), Gaps = 87/379 (22%)

Query: 17  CKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
           C++  ++ WG+      G  P+     SP P     G        GG    LA  ++G  
Sbjct: 57  CEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGW-HCLAVDDNGHA 115

Query: 73  ITWGS-------ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
             WG         + E +   T     + P P     +  V + AAG  H V +T+ G V
Sbjct: 116 YAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHV 175

Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS- 184
           +TWG  +  P   +                KQ + P        +  G E V+     + 
Sbjct: 176 WTWG--QPWPPGDI----------------KQISTPV-------RVQGLEKVRVIAVGAF 210

Query: 185 --------------AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
                            E     +GD      P  V     + +  +AAGG H+  L+  
Sbjct: 211 HNLALTEDGILWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQ 270

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G+V+ WG G  G+LG G       +  ++P      +G+D                    
Sbjct: 271 GEVYAWGRGEHGRLGFGDD----KSSRMVPLKVELLAGED-------------------- 306

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS---------TNDQLRPSYASSLMD- 340
           + +++CGG HS  +T  G + ++G G +G+ G+G           +  L P    S  D 
Sbjct: 307 IVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKLTTGQPMGVDIDLPPPKTRSSRDG 366

Query: 341 -IQVEQIAAGLWHTVCISV 358
             Q + +A G  HT+ I V
Sbjct: 367 QWQAKYVACGGRHTLAIVV 385


>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
 gi|194702086|gb|ACF85127.1| unknown [Zea mays]
 gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
          Length = 389

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 173/417 (41%), Gaps = 96/417 (23%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  + G+L TWG        +    K   +P P        +V+AA G  HC++V + 
Sbjct: 53  SLAICDDGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDK 112

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G  Y WG  E          +G  G                   P  K  G   ++R   
Sbjct: 113 GRAYAWGGNE----------YGQCGE-----------------EPERKEDGTRALRRDIP 145

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
              R                 C + L    K+ +VAAGG H+++L+  G VW WG     
Sbjct: 146 IPQR-----------------CALKL----KVRQVAAGGTHSVVLTQEGHVWTWG----- 179

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           Q      IK + TP  +  LE                           V+ IA G  H+ 
Sbjct: 180 QPWPPGDIKQISTPVRVQGLEK--------------------------VRVIAVGAFHNL 213

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +T+   L  +G   YGQ G G T  + +P     L D+ +  IAAG WH+  ++++G V
Sbjct: 214 ALTEDVILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEV 273

Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           Y +G  + G+LG G D++ + VP  L+  +L  +    VSCG  HS  L  DG++ S+G 
Sbjct: 274 YAWGRGEHGRLGFGDDKSSHMVP--LKVELLAGEDIVQVSCGGTHSVALARDGRMFSYGR 331

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLP------------RNIACGWWHTLLLAETTQ 466
             +G+LG G  +    P  +PI+  LP            + +ACG  HTL +AE T+
Sbjct: 332 GDHGRLGYGRKVTTGHPMELPIN--LPPLSSSRDGRWQAKYVACGGRHTLAIAEWTE 386



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 79/283 (27%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V  WG G +GQLG+G   +    PH +  L                        G   V 
Sbjct: 10  VLAWGSGEDGQLGMGGN-EEKDWPHFVEAL------------------------GPYAVT 44

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLW 351
            +  G R+S  + D G L T+GW   G  GH   T  +  P    +L   ++ Q A G W
Sbjct: 45  AVVAGSRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGW 104

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAE--------NVP------------------- 384
           H + +  +GR Y +GGN++GQ G   ++ E        ++P                   
Sbjct: 105 HCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGT 164

Query: 385 -----------------------KLLETPILES--KRAKVVSCGARHSAVLTEDGQVLSW 419
                                  K + TP+     ++ +V++ GA H+  LTED  + +W
Sbjct: 165 HSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDVILWAW 224

Query: 420 GWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
           G N+YGQLG GD+  R+ P  V  +      +IA G WH+  L
Sbjct: 225 GNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTAL 267



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 138/369 (37%), Gaps = 71/369 (19%)

Query: 17  CKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
           C +  ++ WG+      G  PE     SP P     G        GG    LA  + G+ 
Sbjct: 57  CDDGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGW-HCLAVDDKGRA 115

Query: 73  ITWGSADDEGQSYLTSGKHGETPE-----------PFPLPTEAS----VVKAAAGWAHCV 117
             WG     G  Y   G+ GE PE             P+P   +    V + AAG  H V
Sbjct: 116 YAWG-----GNEY---GQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSV 167

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
            +T+ G V+TWG  +  P   + +      S      G +           +    E+V+
Sbjct: 168 VLTQEGHVWTWG--QPWPPGDIKQI-----STPVRVQGLEKVRVIAVGAFHNLALTEDVI 220

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
                +    E     +GD      P  V     + +  +AAGG H+  L+  G+V+ WG
Sbjct: 221 ---LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWG 277

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
            G  G+LG G       + H++P      +G+D                    + +++CG
Sbjct: 278 RGEHGRLGFGDD----KSSHMVPLKVELLAGED--------------------IVQVSCG 313

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTND---------QLRPSYASSLMDIQVEQIAA 348
           G HS  +   G + ++G G +G+ G+G              L P  +S     Q + +A 
Sbjct: 314 GTHSVALARDGRMFSYGRGDHGRLGYGRKVTTGHPMELPINLPPLSSSRDGRWQAKYVAC 373

Query: 349 GLWHTVCIS 357
           G  HT+ I+
Sbjct: 374 GGRHTLAIA 382


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 139/277 (50%), Gaps = 31/277 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL--IPCLEHAASGKDR 271
           I  +AAG  H+L L+  G V+ +G+G  G+LG G+    +    +  +  ++  A+G   
Sbjct: 80  IQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSDIQAIAAGDFH 139

Query: 272 PL-LVRQGSVNSSGKA-------------------GRSYVKEIACGGRHSAVVTDAGALL 311
            L L + G V S G                       S V+ IA GG HS  +T +G + 
Sbjct: 140 SLALTKSGDVYSFGNGTSGLGHGNTEDQSTPKKIESLSDVQAIAAGGNHSLALTKSGDVY 199

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +FG+GL+G+ GHG T+ QL P     L DIQ   IAAG  H++ ++  G VY FG    G
Sbjct: 200 SFGFGLFGRLGHGDTDSQLEPKKIEDLSDIQA--IAAGGNHSLALTKSGDVYSFGWGLHG 257

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G  + +  PK +E    +    + V+ GA HS  LT+ G+V S+G    GQLG GD
Sbjct: 258 QLGHGDTENQLTPKKIE----DLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGD 313

Query: 432 SIDRNIPSLVPIHGFLP-RNIACGWWHTLLLAETTQI 467
           + D+  P    I G    + IA G +H+L L ++  +
Sbjct: 314 TDDQLTPK--KIEGLKDIQAIAAGDFHSLALTKSGDV 348



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 167/379 (44%), Gaps = 55/379 (14%)

Query: 91  HGETPE---PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
           HG+T     P  +   + +   AAG  H +++T++G+VY++G+            FG  G
Sbjct: 62  HGDTANQLAPKKIEGLSDIQAIAAGTNHSLALTKSGDVYSFGFGL----------FGRLG 111

Query: 148 SFQKDST---GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
               DS     K   L   QA  +       + K     S    +     G+     +P 
Sbjct: 112 HGNTDSQLEPKKIEGLSDIQAIAAGDFHSLALTKSGDVYSFGNGTSGLGHGNTEDQSTPK 171

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
            +     V+   +AAGG H+L L+  G V+ +G+G  G+LG G     +  P  I  L  
Sbjct: 172 KIESLSDVQ--AIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLE-PKKIEDL-- 226

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
                                   S ++ IA GG HS  +T +G + +FGWGL+GQ GHG
Sbjct: 227 ------------------------SDIQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHG 262

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
            T +QL P     L DIQ   +AAG  H++ ++  G VY FG    GQLG G    +  P
Sbjct: 263 DTENQLTPKKIEDLSDIQA--VAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTP 320

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
           K +E      K  + ++ G  HS  LT+ G V S+G N    LG GD+ ++  P    I 
Sbjct: 321 KKIEG----LKDIQAIAAGDFHSLALTKSGDVYSFG-NGTSGLGHGDTANQLEPK--KIE 373

Query: 445 GFLP-RNIACGWWHTLLLA 462
           G    + IA G  H+L LA
Sbjct: 374 GLTDIQAIAAGANHSLALA 392



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 100/185 (54%), Gaps = 16/185 (8%)

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
           G S ++ IA G  HS  +T +G + +FG+GL+G+ GHG+T+ QL P     L DIQ   I
Sbjct: 76  GLSDIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSDIQA--I 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           AAG +H++ ++  G VY FG    G LG G  + ++ PK +E+        + ++ G  H
Sbjct: 134 AAGDFHSLALTKSGDVYSFGNGTSG-LGHGNTEDQSTPKKIES----LSDVQAIAAGGNH 188

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSID----RNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           S  LT+ G V S+G+  +G+LG GD+      + I  L  I       IA G  H+L L 
Sbjct: 189 SLALTKSGDVYSFGFGLFGRLGHGDTDSQLEPKKIEDLSDIQA-----IAAGGNHSLALT 243

Query: 463 ETTQI 467
           ++  +
Sbjct: 244 KSGDV 248



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 8/159 (5%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           ++ +FG G+YG+ GHG T +QL P     L DIQ   IAAG  H++ ++  G VY FG  
Sbjct: 48  SVFSFGMGMYGKLGHGDTANQLAPKKIEGLSDIQA--IAAGTNHSLALTKSGDVYSFGFG 105

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            FG+LG G   ++  PK +E         + ++ G  HS  LT+ G V S+G N    LG
Sbjct: 106 LFGRLGHGNTDSQLEPKKIEG----LSDIQAIAAGDFHSLALTKSGDVYSFG-NGTSGLG 160

Query: 429 LGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
            G++ D++ P  +     + + IA G  H+L L ++  +
Sbjct: 161 HGNTEDQSTPKKIESLSDV-QAIAAGGNHSLALTKSGDV 198



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 37/224 (16%)

Query: 31  TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
           ++P+K   LS + A   GG+            +LA ++SG + ++G        +   G+
Sbjct: 168 STPKKIESLSDVQAIAAGGN-----------HSLALTKSGDVYSFG--------FGLFGR 208

Query: 91  --HGETP---EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
             HG+T    EP  +   + +   AAG  H +++T++G+VY++GW        +    G 
Sbjct: 209 LGHGDTDSQLEPKKIEDLSDIQAIAAGGNHSLALTKSGDVYSFGW-------GLHGQLGH 261

Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS-AREESENPASGDEFFTLSPC 204
             +  + +  K   L   QA  +       + K  +  S  R  +     GD    L+P 
Sbjct: 262 GDTENQLTPKKIEDLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPK 321

Query: 205 LVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
            +    G+K I  +AAG  H+L L+  G V+ +G G  G LG G
Sbjct: 322 KI---EGLKDIQAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHG 361


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 184/442 (41%), Gaps = 93/442 (21%)

Query: 62  FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
           F+L T+    ++ WGS +D GQ  +   +  +           +V    AG  + +++  
Sbjct: 7   FSLPTA----VLAWGSGED-GQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICA 61

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP-PSDKRAGEEVVKR- 179
            G ++TWGW                   Q+ + G      TE +P P D  AG  +V+  
Sbjct: 62  DGRLFTWGWN------------------QRGTLGHPPETKTESSPAPVDALAGVSIVQAA 103

Query: 180 --------------------RKTSSAREESENPASGDEFFTLS-PCLVTLNPGVKITKVA 218
                                +     EE+E    G        P      P +K+ +VA
Sbjct: 104 IGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVA 163

Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
           AGG H+++L+  G VW W     GQ      IK + TP  +  LE+              
Sbjct: 164 AGGTHSVVLTQDGHVWTW-----GQPWPPGDIKQISTPVRVQGLEN-------------- 204

Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
                       VK IA G  H+  +T+ G L  +G   YGQ G G T  + +P     L
Sbjct: 205 ------------VKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGL 252

Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRA 397
            D+ +  IAAG WH+  ++ EG VY +G  + G+LG G D++ + VP+ +E  +L  +  
Sbjct: 253 SDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVE--LLAGEDI 310

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP--------- 448
             VSCG  HS  LT DG++ S+G   +G+LG G  +    P  VPI    P         
Sbjct: 311 IQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGG 370

Query: 449 ----RNIACGWWHTLLLAETTQ 466
               R +ACG  HTL +A  T+
Sbjct: 371 QWQARYVACGGRHTLAIATWTE 392


>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60470703|gb|EAL68677.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 849

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 202/436 (46%), Gaps = 61/436 (13%)

Query: 59  GCGFALATSESGKLITWGSADD----EGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
           G   +LA S  G + +WG + +     GQ Y  S K     +P  + +     ++K A G
Sbjct: 42  GEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACG 101

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG--------SFQKDSTGKQSALPTEQ 164
             H +++T+ G+VY WG    +  ++ + D  S          S Q+      S   + +
Sbjct: 102 NFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIEMPRLSSQRIIEASVSQYLSGE 161

Query: 165 APPSDKRAG----EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
               D   G    ++   +  ++SA+ +S++     +     P  +   P  ++  V+ G
Sbjct: 162 KKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPE-EVVDVSGG 220

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
              +  ++  G+++ WG+  +GQLGLG+R     TP L+  L                 V
Sbjct: 221 WAFSAAVTKSGRLYTWGFNEKGQLGLGNRW-FHSTPQLVKTL---------------IDV 264

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
           N         +  + CG +H   +TD G + ++G G++GQ GHG+    L P      ++
Sbjct: 265 N---------IVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVE 315

Query: 341 I--QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT----------GVDQ--AENVPKL 386
           +  ++ Q+A G   T+  SV+G +Y FG  ++GQLG+          G D     ++P +
Sbjct: 316 LNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIV 375

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHG 445
           +++  LE+K+ K V+CG  H+ V+T++ +V  WGW   G LGLG+   + +P L+  + G
Sbjct: 376 VKS--LETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQLITSLSG 433

Query: 446 FLPRNIACGWWHTLLL 461
               +I  G  HT+++
Sbjct: 434 EEIASITAGEKHTIVV 449



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 139/325 (42%), Gaps = 55/325 (16%)

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY-----GGEGQLGLGSRIKM 252
            F   P L+      +I KVA G  H+L L+DMG+V+ WG        +  L + S   +
Sbjct: 79  MFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGL 138

Query: 253 VPTPHLIP--CLE-------------HAASGKDRPLLVRQGSVNSSGKAGRSY------- 290
           +  P L     +E             + A+G  +P    +    S+    +S        
Sbjct: 139 IEMPRLSSQRIIEASVSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIID 198

Query: 291 ---------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                          V +++ G   SA VT +G L T+G+   GQ G G+      P   
Sbjct: 199 LNQTIPMQIQDIPEEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLV 258

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
            +L+D+ +  +  G  H   I+ +G VY +G   FGQLG G  ++   PK ++  +  ++
Sbjct: 259 KTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNE 318

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL------------GLGDSIDRNIPSLVP- 442
           R   V+CG+  + V +  G + ++G  +YGQL            G  +    +IP +V  
Sbjct: 319 RIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKS 378

Query: 443 IHGFLPRNIACGWWHTLLLAETTQI 467
           +     +N+ACG  HT+++ +  ++
Sbjct: 379 LETKKIKNVACGHLHTIVVTDENEV 403



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 37/261 (14%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           GG  F+ A ++SG+L TWG  +++GQ  L +     TP+      + ++V    G  H  
Sbjct: 219 GGWAFSAAVTKSGRLYTWG-FNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHIC 277

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAG-----SFQKDSTGKQSALPTEQAPPSDKRA 172
           ++T+ GEVY+WG             FG  G     S+      +Q     E+       +
Sbjct: 278 AITDQGEVYSWGLGV----------FGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGS 327

Query: 173 GEEVVKRRK------------TSSAREESENPASG--DEFFTLS-PCLVTLNPGVKITKV 217
              +V+  +               + EE+++   G  D  F  S P +V      KI  V
Sbjct: 328 NFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNV 387

Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL--EHAAS---GKDRP 272
           A G  HT++++D  +V+ WG+G  G LGLG++ +    P LI  L  E  AS   G+   
Sbjct: 388 ACGHLHTIVVTDENEVYQWGWGSSGALGLGNK-RFQLVPQLITSLSGEEIASITAGEKHT 446

Query: 273 LLVRQGSVNSSGKAGRSYVKE 293
           ++VR   V S     +S + E
Sbjct: 447 IVVRCSDVTSFAYDYKSLINE 467



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 118/294 (40%), Gaps = 78/294 (26%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG------SRIKMVP 254
           L P ++    G +I +  +G  H+L +S  G V+ WG   EGQLG+G       ++  V 
Sbjct: 23  LEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVA 82

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P LI  L+H                          + ++ACG  HS  +TD G +  + 
Sbjct: 83  KPTLIKSLQHER------------------------IIKVACGNFHSLALTDMGKV--YE 116

Query: 315 WGLYGQCGHG-------STNDQLRPSYASS--LMDIQVEQIAAGLWHTVCISVEGRVYVF 365
           WG   +           STN  +     SS  +++  V Q  +G         E + Y  
Sbjct: 117 WGQLHRLDESQSSLDIQSTNGLIEMPRLSSQRIIEASVSQYLSG---------EKKAYDA 167

Query: 366 GG------------------NQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH 406
            G                  ++   LG  +D  + +P ++ + P    +    VS G   
Sbjct: 168 NGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIP----EEVVDVSGGWAF 223

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWH 457
           SA +T+ G++ +WG+N+ GQLGLG+    + P LV     +  NI    CG  H
Sbjct: 224 SAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVK--TLIDVNIVSVVCGRQH 275



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 5/117 (4%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           ++L+ G    GQ GH S  + L P+    L+  ++ Q  +G  H++ +S  G VY +G +
Sbjct: 2   SVLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRS 61

Query: 369 QFGQLGT-----GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           + GQLG      G D+   V K      L+ +R   V+CG  HS  LT+ G+V  WG
Sbjct: 62  KEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWG 118


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 34/260 (13%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P +V    G  +T +A GG HT+ L+  GQV+ WG G +G LG G+ ++   +P +I   
Sbjct: 186 PNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGN-LRDRYSPLMI--- 241

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG-WGLYGQC 321
                  D PL      VN         V  +AC   HSAV+++ G L T+G  G +   
Sbjct: 242 -------DGPLR----DVN---------VVHVACYENHSAVISEDGNLYTWGKAGPFLGY 281

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
              S   Q +P    +L   ++ Q+A G  HT+ I  EGRVY FG N+FG+LG G D+A 
Sbjct: 282 MDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAI 341

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
             P ++   +   K    VSCG  HSA + EDG +  WGW   GQLG G+   +++ S  
Sbjct: 342 TKPTMVPNLVSICK----VSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEP--KSLFSPT 395

Query: 442 PIHGFLPR---NIACGWWHT 458
           P++GF  +   +++CG+ HT
Sbjct: 396 PVNGFNDQPLEDVSCGYGHT 415



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 170/448 (37%), Gaps = 102/448 (22%)

Query: 22  VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
           +Y+WG       G   +K   L  +   L G +     CGG     +A +  G++ +WG+
Sbjct: 164 LYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGS--HTIALNSKGQVFSWGA 221

Query: 78  ADDEGQSYLTSGKHGETPEPFPLP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
                Q  L  G   +   P  +     + +VV  A    H   ++E G +YTWG     
Sbjct: 222 GP---QGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWG----- 273

Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
                    G    +  DS  KQ+                                    
Sbjct: 274 -------KAGPFLGYMDDSVTKQT------------------------------------ 290

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
                   P LV    G +I +VA G  HTL++ + G+V+ +G    G+LG G   K + 
Sbjct: 291 -------KPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHD-KAIT 342

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P ++P L                            + +++CG  HSA + + G L  +G
Sbjct: 343 KPTMVPNLVS--------------------------ICKVSCGRHHSAAIDEDGVLFMWG 376

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG  GQ G G       P+  +   D  +E ++ G  HT  I+  G  Y +G N   Q G
Sbjct: 377 WGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCG 436

Query: 375 --TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
             + V    + P+ +  P     R   ++CGA  + ++T  GQ+ +WG N  GQLG G++
Sbjct: 437 VPSSVYGELSSPRGIVLP--SGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEA 494

Query: 433 IDRNIPSLVPIHGFLPRN---IACGWWH 457
             +     +P+     +    +ACG  H
Sbjct: 495 -KKTFSQPMPVESLSEKRVKMVACGEDH 521



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 3/160 (1%)

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           L  +G G  G+ GH     +  P+   SL+   V  IA G  HT+ ++ +G+V+ +G   
Sbjct: 164 LYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGP 223

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G LG G  +    P +++ P+ +      V+C   HSAV++EDG + +WG        +
Sbjct: 224 QGCLGHGNLRDRYSPLMIDGPLRDVNVVH-VACYENHSAVISEDGNLYTWGKAGPFLGYM 282

Query: 430 GDSIDRNI-PSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            DS+ +   P LV  ++G     +ACG  HTL++ E  ++
Sbjct: 283 DDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRV 322


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 198/487 (40%), Gaps = 103/487 (21%)

Query: 39  LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
           L P   +L  G   K +  G    +LA +E G + +WG            GK GE   P 
Sbjct: 23  LDPAVIQLLKGKRIKQIACGE-AHSLAVTEFGDVYSWGR-----------GKEGELGHPQ 70

Query: 99  PLPT----------EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV--------- 139
              T             +VK A G  H +++T+ G+VY WG    + + K          
Sbjct: 71  KAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWGQLHEIDATKSGVKSQGGLV 130

Query: 140 ----TRDFGSA---GSFQKDSTGKQSALPTEQAPPS-------------DKRAGEEVVKR 179
                + F S     S      G+++A   E A  S             D +  EE    
Sbjct: 131 EMTGIKSFASKVADHSLSMYLNGEKAAYDEESASSSVLQDNPTANGLVTDDQEEEEEFLP 190

Query: 180 RKTSSAREESENPASGDEF------FTLSPCLVTL-NPGVKITKVAAGGRHTLILSDMGQ 232
                 ++E +   SG +         ++P LV   +  +KI  ++AG  ++  ++  G 
Sbjct: 191 EAIVDTQQEQQPEKSGSKVGEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGN 250

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V+ WG+  +GQLGLG R              H       P ++R  S  S        + 
Sbjct: 251 VYTWGFNEKGQLGLGDR------------WYHG-----NPRVIRSLSNKS--------IV 285

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ--VEQIAAGL 350
            IACG +H A ++ +G L T+G G++GQ GHG     L P         Q  + Q+A G 
Sbjct: 286 NIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGA 345

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQ---------------AENVPKLLETPILESK 395
             T+ +S  G ++ FG  ++GQLG   D                  ++PK  +   LES 
Sbjct: 346 NFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPK--QVKALESV 403

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
           + + V+CG  H+  +T D  V +WGW   G LG GD   + +P  VP + G    +++ G
Sbjct: 404 KVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISSVSGG 463

Query: 455 WWHTLLL 461
             HTL++
Sbjct: 464 EKHTLIV 470



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           ++++FG G  GQ G     DQL P+    L   +++QIA G  H++ ++  G VY +G  
Sbjct: 2   SVISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRG 61

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           + G+LG         P L++   LE +R   V+CG  HS  LT+ G+V  WG
Sbjct: 62  KEGELGHPQKAMTAPPALIKA--LEHERIVKVACGNYHSLALTDTGKVYQWG 111



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 5/108 (4%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           V  FG  + GQLG  V++ +  P +++  +L+ KR K ++CG  HS  +TE G V SWG 
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQ--LLKGKRIKQIACGEAHSLAVTEFGDVYSWGR 60

Query: 422 NKYGQLGLGDSIDRNIPSLVPI--HGFLPRNIACGWWHTLLLAETTQI 467
            K G+LG         P+L+    H  + + +ACG +H+L L +T ++
Sbjct: 61  GKEGELGHPQKAMTAPPALIKALEHERIVK-VACGNYHSLALTDTGKV 107



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 109/278 (39%), Gaps = 22/278 (7%)

Query: 39  LSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
           ++P+     G  S K V    G  ++ A + +G + TWG  +++GQ  L    +   P  
Sbjct: 218 MTPVLVDF-GSKSIKIVDISAGWAYSAAVTSTGNVYTWG-FNEKGQLGLGDRWYHGNPRV 275

Query: 98  FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSA 146
               +  S+V  A G  H  +++++G++YTWG            +  +   KV       
Sbjct: 276 IRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQ 335

Query: 147 GSFQKDSTGKQSALP-TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-PC 204
               + +TG    +  +E         GE         +   +  N    D+    S P 
Sbjct: 336 KKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPK 395

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-- 262
            V     VK+ KVA G  HT+ ++    V+ WG+G  G LG G R K    P  +P L  
Sbjct: 396 QVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDR-KFQLVPQRVPSLSG 454

Query: 263 EHAAS---GKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
           E  +S   G+   L+VR     +     +  V +   G
Sbjct: 455 EEISSVSGGEKHTLIVRSSDTTTFAFDYKQLVNDQKTG 492



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 30/141 (21%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V  +G G +GQLGL      V    L P +     GK                     +K
Sbjct: 3   VISFGVGKQGQLGLD-----VNKDQLDPAVIQLLKGKR--------------------IK 37

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           +IACG  HS  VT+ G + ++G G  G+ GH        P+   +L   ++ ++A G +H
Sbjct: 38  QIACGEAHSLAVTEFGDVYSWGRGKEGELGHPQKAMTAPPALIKALEHERIVKVACGNYH 97

Query: 353 TVCISVEGRVYVFGGNQFGQL 373
           ++ ++  G+VY     Q+GQL
Sbjct: 98  SLALTDTGKVY-----QWGQL 113



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVV--SCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
           ++G  VD+ +  P L++     SK  K+V  S G  +SA +T  G V +WG+N+ GQLGL
Sbjct: 208 KVGEIVDKNQMTPVLVD---FGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGL 264

Query: 430 GDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           GD      P ++  +      NIACG  H   ++++
Sbjct: 265 GDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISKS 300


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 190/435 (43%), Gaps = 65/435 (14%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
            A  + G +  WG  +  GQ  L  G H E   P  +P    V   AAG  H  +V++ G
Sbjct: 70  FAVRQDGTVWAWG-LNVWGQ--LGDGTHTERHTPVQVPGLTGVTAIAAGRRHTFAVSQDG 126

Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
            V+ WG            D+G  G   +        LP E    +   AG     RR T 
Sbjct: 127 TVWAWG----------DNDWGQLGDGTRADRHTPVQLP-ELTGVTAIAAG-----RRHTF 170

Query: 184 SAREESENPASGDEFF----------TLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQ 232
           + R++    A GD  +           L+P  V   PG+  +T +AAG  HTL +   G 
Sbjct: 171 AVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQV---PGLTGVTAIAAGDYHTLAVRQDGT 227

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQ-GSVNSSGKA-- 286
           VW WG    GQLG G+  + + TP  +P L      ++G+   + VRQ G+V + G    
Sbjct: 228 VWAWGNNALGQLGDGTYTERL-TPVQVPGLTGVTAISAGESHTVAVRQDGTVWAWGDNVW 286

Query: 287 ------------------GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                             G S V  IA G RH+  V   G +  +G   +GQ G G+ +D
Sbjct: 287 GQLGDGTRTDRLTPVQVPGLSGVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSD 346

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           +L P     L    V  IAAG +HT+ +  +G V+ +G N +GQLG G       P  ++
Sbjct: 347 RLTPVQVPDLT--SVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTP--VQ 402

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
            P L    A  ++ G  H+  + +DG V +WG N +GQLG G   DR  P  VP    + 
Sbjct: 403 VPGLTGVTA--IAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLTSVT 460

Query: 449 RNIACGWWHTLLLAE 463
             IA G +HTL + +
Sbjct: 461 A-IAAGDYHTLAVRQ 474



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 186/454 (40%), Gaps = 91/454 (20%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
            A S+ G +  WG  +D GQ  L  G   +   P  LP    V   AAG  H  +V + G
Sbjct: 120 FAVSQDGTVWAWGD-NDWGQ--LGDGTRADRHTPVQLPELTGVTAIAAGRRHTFAVRQDG 176

Query: 124 EVYTWG---WRECVPSAKVTR------------------DF--------GSAGSFQKDST 154
            V+ WG   W +     +  R                  D+        G+  ++  ++ 
Sbjct: 177 TVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTGVTAIAAGDYHTLAVRQDGTVWAWGNNAL 236

Query: 155 GKQ-SALPTEQAPP---------SDKRAGEEVVKRRKTSSAREESENPASGDEFF----- 199
           G+      TE+  P         +   AGE       T + R++    A GD  +     
Sbjct: 237 GQLGDGTYTERLTPVQVPGLTGVTAISAGES-----HTVAVRQDGTVWAWGDNVWGQLGD 291

Query: 200 -----TLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
                 L+P  V   PG+  +T +A G RHT  +   G VW WG    GQLG G+R   +
Sbjct: 292 GTRTDRLTPVQV---PGLSGVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRL 348

Query: 254 PTPHLIPCLEHA---ASGKDRPLLVRQ-GSVNSSGKA--------------------GRS 289
            TP  +P L      A+G    L VRQ G+V + G                      G +
Sbjct: 349 -TPVQVPDLTSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPGLT 407

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
            V  IA G  H+  +   G +  +G  ++GQ G G+  D+L P     L    V  IAAG
Sbjct: 408 GVTAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLT--SVTAIAAG 465

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA-KVVSCGARHSA 408
            +HT+ +  +G V  +G N +GQLG G       P ++  P L        ++ G  H+ 
Sbjct: 466 DYHTLAVRQDGTVCAWGFNAYGQLGDGTSSRSPSPVMV--PGLTGVTVFAALAAGDSHTV 523

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            + +DG V +WG N  GQLG G +IDR IP  +P
Sbjct: 524 AVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIP 557



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 176/415 (42%), Gaps = 63/415 (15%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
           LA  + G +  WG   +     L  G + E   P  +P    V   +AG +H V+V + G
Sbjct: 220 LAVRQDGTVWAWG---NNALGQLGDGTYTERLTPVQVPGLTGVTAISAGESHTVAVRQDG 276

Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
            V+ WG             +G  G    D T      P +    S   A  E   RR T 
Sbjct: 277 TVWAWG----------DNVWGQLG----DGTRTDRLTPVQVPGLSGVTAIAE--GRRHTF 320

Query: 184 SAREESENPASGDEFF----------TLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQ 232
           + R++    A G  F+           L+P  V   P +  +T +AAG  HTL +   G 
Sbjct: 321 AVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQV---PDLTSVTAIAAGDYHTLAVRQDGT 377

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQ-GSV-----NSS 283
           VW WG    GQLG G+    + TP  +P L      A+G+   + +RQ G+V     N  
Sbjct: 378 VWAWGDNVWGQLGDGTYTDRL-TPVQVPGLTGVTAIAAGESHTVAMRQDGTVWAWGDNVW 436

Query: 284 GKAGR---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
           G+ G                + V  IA G  H+  V   G +  +G+  YGQ G G+++ 
Sbjct: 437 GQLGDGTYTDRLTPVQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGTSSR 496

Query: 329 QLRPSYASSLMDIQV-EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
              P     L  + V   +AAG  HTV +  +G V+ +G N  GQLG G      +P  +
Sbjct: 497 SPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIP--V 554

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
           + P L    A  ++ G+ H+    +DG V SWG N YGQLG G +  R  P  VP
Sbjct: 555 QIPGLAGVTA--IAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRLSPVQVP 607



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 182/448 (40%), Gaps = 68/448 (15%)

Query: 27  YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL 86
           Y    +P + P L+ + A +  G+S            +A  + G +  WG   D     L
Sbjct: 394 YTDRLTPVQVPGLTGVTA-IAAGES----------HTVAMRQDGTVWAWG---DNVWGQL 439

Query: 87  TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
             G + +   P  +P   SV   AAG  H ++V + G V  WG             F + 
Sbjct: 440 GDGTYTDRLTPVQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWG-------------FNAY 486

Query: 147 GSFQKDSTGKQSALP---------TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
           G    D T  +S  P         T  A  +   +    V +  T  A   + +   GD 
Sbjct: 487 GQL-GDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGDG 545

Query: 198 FFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMV 253
             T+   +    PG+  +T +AAG  HTL     G VW WG    GQLG G+   R+  V
Sbjct: 546 A-TIDRRIPVQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRLSPV 604

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA--------------------GRSYVKE 293
             P L      AA       L++ G+V++ G+                     G + V  
Sbjct: 605 QVPGLTGVSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLTGVTA 664

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +A G  H+  +   G +  +G+   GQ G G+T  +L P     L D  V  IAAG +HT
Sbjct: 665 VAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLAPVQVQGLTD--VTAIAAGYFHT 722

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           V +  +G V+ +G N +GQLG G   A + P  ++    E      ++ G  H+  + +D
Sbjct: 723 VAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQ----ELTGVSALAAGYAHTVAVKQD 778

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           G V +WG N   QLG G S DR  P  V
Sbjct: 779 GTVWAWGNNSGTQLGNGSSTDRYTPVWV 806



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 121/267 (45%), Gaps = 35/267 (13%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L+P  V   PG+  +T VAAG  HT  +   G VW WG    GQLG G+  +   TP  +
Sbjct: 48  LTPVQV---PGLTGVTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTER-HTPVQV 103

Query: 260 PCLEHA---ASGKDRPLLVRQ------------GSVNSSGKAGR---------SYVKEIA 295
           P L      A+G+     V Q            G +    +A R         + V  IA
Sbjct: 104 PGLTGVTAIAAGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTGVTAIA 163

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
            G RH+  V   G +  +G   +GQ G G+  ++L P     L    V  IAAG +HT+ 
Sbjct: 164 AGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTG--VTAIAAGDYHTLA 221

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           +  +G V+ +G N  GQLG G       P  ++ P L    A  +S G  H+  + +DG 
Sbjct: 222 VRQDGTVWAWGNNALGQLGDGTYTERLTP--VQVPGLTGVTA--ISAGESHTVAVRQDGT 277

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVP 442
           V +WG N +GQLG G   DR  P  VP
Sbjct: 278 VWAWGDNVWGQLGDGTRTDRLTPVQVP 304



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 169/421 (40%), Gaps = 62/421 (14%)

Query: 31  TSPEKSPILSP------IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
           +S   SP++ P      + A L  GDS            +A  + G +  WG  +  GQ 
Sbjct: 494 SSRSPSPVMVPGLTGVTVFAALAAGDS----------HTVAVMQDGTVWAWG-LNASGQ- 541

Query: 85  YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
            L  G   +   P  +P  A V   AAG AH ++  + G V++WG       A      G
Sbjct: 542 -LGDGATIDRRIPVQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWG-------ANSYGQLG 593

Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS-AREESENPASGDEFFTLSP 203
              +  + S  +   L    A  +       +++    S+  R        G     L+P
Sbjct: 594 DGTTTHRLSPVQVPGLTGVSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTP 653

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             V    GV  T VAAG  HT+ L   G VW WGY   GQLG G+  + +          
Sbjct: 654 VQVHGLTGV--TAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLA--------- 702

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
                   P+ V+          G + V  IA G  H+  V   G +  +G+ L+GQ G 
Sbjct: 703 --------PVQVQ----------GLTDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGD 744

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           GS+  +  P     L    V  +AAG  HTV +  +G V+ +G N   QLG G       
Sbjct: 745 GSSTARSTPVQVQELTG--VSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYT 802

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           P  +E     S     ++ G  H+A ++ +G   +WG N +GQ+G G + DR  P  V I
Sbjct: 803 PVWVEGLTGVSA----LTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTADRPRPVDVVI 858

Query: 444 H 444
            
Sbjct: 859 Q 859



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 117/256 (45%), Gaps = 37/256 (14%)

Query: 210 PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           PG+  +T   AG  HT+ +   G  W WG    GQLG G+R   + TP  +P L      
Sbjct: 4   PGLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRL-TPVQVPGL------ 56

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                               + V  +A G  H+  V   G +  +G  ++GQ G G+  +
Sbjct: 57  --------------------TGVTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTE 96

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           +  P     L    V  IAAG  HT  +S +G V+ +G N +GQLG G     + P  ++
Sbjct: 97  RHTPVQVPGLTG--VTAIAAGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTP--VQ 152

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
            P L    A  ++ G RH+  + +DG V +WG N +GQLG G   +R  P  VP + G  
Sbjct: 153 LPELTGVTA--IAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTGVT 210

Query: 448 PRNIACGWWHTLLLAE 463
              IA G +HTL + +
Sbjct: 211 A--IAAGDYHTLAVRQ 224


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 28/233 (12%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V  WG G +GQLG G          L+P    A  G+D                    + 
Sbjct: 125 VCSWGRGEDGQLGHGD-----TDDRLLPTKLSAFDGQD--------------------IV 159

Query: 293 EIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
            + CG  ++   + +G  + ++GWG +G+ GHG  +D   P    +L  ++++QI+ G  
Sbjct: 160 SVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDC 219

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           H + +++E +V  +G NQ G+LG G  +  +VP+  +    E  R K+V+ GA HS  +T
Sbjct: 220 HCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQ--KILAFEGIRIKMVAAGAEHSVAIT 277

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           EDG +  WGW +YG LGLGD+ DR IP  V I G     ++CGW HT+ ++ +
Sbjct: 278 EDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTISISSS 330



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 29/257 (11%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ-VWGWGYGGEGQL 244
           R E      GD    L P  ++   G  I  V  G  +T+  S  G+ V+ WG+G  G+L
Sbjct: 130 RGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRL 189

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G G      P+   IP           P+   QG            +K+I+CG  H   V
Sbjct: 190 GHGD-----PSDLFIP----------HPIRALQGL----------RIKQISCGDCHCLAV 224

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
           T    +L++G    G+ G G+T D   P    +   I+++ +AAG  H+V I+ +G +Y 
Sbjct: 225 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYG 284

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G  ++G LG G      +P   E   ++  +  +VSCG RH+  ++  G + + GW+KY
Sbjct: 285 WGWGRYGNLGLGDTNDRLIP---EKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKY 341

Query: 425 GQLGLGDSIDRNIPSLV 441
           GQLG GD  D  +P  V
Sbjct: 342 GQLGHGDFEDCLVPRKV 358



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 125/298 (41%), Gaps = 57/298 (19%)

Query: 63  ALATSESGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAH 115
           ++    SG ++ +WG  +D GQ       HG+T +   LPT+ S      +V    G  +
Sbjct: 115 SIQNQVSGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTKLSAFDGQDIVSVTCGADY 167

Query: 116 CVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPS 168
            V+ +++G +VY+WGW           DFG  G       F          L  +Q    
Sbjct: 168 TVARSKSGKDVYSWGWG----------DFGRLGHGDPSDLFIPHPIRALQGLRIKQISCG 217

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           D       ++ +  S  R ++     G    +  P  +    G++I  VAAG  H++ ++
Sbjct: 218 DCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAIT 277

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
           + G ++GWG+G  G LGLG          LIP  E      D+ ++V             
Sbjct: 278 EDGDLYGWGWGRYGNLGLGD-----TNDRLIP--EKVNIDGDKIVMV------------- 317

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
                 +CG RH+  ++ +G L T GW  YGQ GHG   D L P    +L D  + Q+
Sbjct: 318 ------SCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 369


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 145/293 (49%), Gaps = 49/293 (16%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           +I ++A G  HT++L+D G+V+ WG G +G+LG G           +P L     GK+  
Sbjct: 35  RIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDN-----GWKFVPRLVEELRGKN-- 87

Query: 273 LLVRQ---GSVNSS----------------GKAGRS-----------------YVKEIAC 296
             +RQ   GS +++                GK G                    V+++AC
Sbjct: 88  --IRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLKGMQVRQVAC 145

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           G RH+ V+ +   + T+G    G  GHG T   Q  P     L    + QI+A  +HT  
Sbjct: 146 GSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAA 205

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           +S  G V+ FG  +FG+LG   ++ + V + +E   L  KR K V+CG  H+A +TE G+
Sbjct: 206 LSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEA--LAGKRVKQVACGGFHTAAVTETGE 263

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           V +WG  ++GQLG GD +++ +P+ V  +   L   I CGW HT+ L +T ++
Sbjct: 264 VYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEV 316



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 163/382 (42%), Gaps = 51/382 (13%)

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           + +WG  +D GQ  L        P P     E  +V+ A G  H V +T+ GEVYTWG  
Sbjct: 3   VYSWGRGED-GQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGR- 60

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE- 190
                       G  G       G +  +P        K   +       T++     + 
Sbjct: 61  ------------GDDGRLGHGDNGWK-FVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDL 107

Query: 191 ---------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
                        G+E    +P LV    G+++ +VA G RHT++L +   V+ WG    
Sbjct: 108 YTWGGGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKEN 167

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           G  G G           +PC      GK+                    + +I+  G H+
Sbjct: 168 GVSGHGD----TEGHQYLPCPVEELRGKN--------------------IVQISACGFHT 203

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           A +++ G + TFG G +G+ GH S  +Q    +  +L   +V+Q+A G +HT  ++  G 
Sbjct: 204 AALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGE 263

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           VY +GG + GQLG G    + VP  +E+  L  K    ++CG  H+  LT+ G+V +WG 
Sbjct: 264 VYTWGGGEHGQLGHGDKVNKTVPTRVES--LVEKLVVQITCGWSHTVALTDTGEVYTWGN 321

Query: 422 NKYGQLGLGDSIDRNIPSLVPI 443
             +G+LG  D+    +P LV +
Sbjct: 322 GDHGKLGHNDTTKVTLPKLVDV 343



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 171/409 (41%), Gaps = 65/409 (15%)

Query: 22  VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
           VY WG        L  TS +  P+  PI A L      +  CG G    L  ++ G++ T
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPV--PIDA-LAERRIVQIACGSGHTVVL--TDEGEVYT 57

Query: 75  WGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
           WG  DD     L  G +G    P         ++ +   G  H  +VT +G++YTWG   
Sbjct: 58  WGRGDD---GRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGM 114

Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA------GEEVVKRRKTSSAR 186
                     +G  G    + TG  +    E       R          V+   K     
Sbjct: 115 ----------YGKLG--HGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTW 162

Query: 187 EESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
            + EN  SG    E     PC V    G  I +++A G HT  LS+ G+V+ +G G  G+
Sbjct: 163 GDKENGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGR 222

Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
           LG  S  +  P    +  L                       AG+  VK++ACGG H+A 
Sbjct: 223 LGHNSE-RNQPVARFVEAL-----------------------AGKR-VKQVACGGFHTAA 257

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           VT+ G + T+G G +GQ GHG   ++  P+   SL++  V QI  G  HTV ++  G VY
Sbjct: 258 VTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVY 317

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
            +G    G+LG        +PKL++  +LE KR   V+    H+  L +
Sbjct: 318 TWGNGDHGKLGHNDTTKVTLPKLVD--VLEGKRVISVASYNEHTVALVD 364



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 120/240 (50%), Gaps = 35/240 (14%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V+ WG G +GQLGLG                   S + RP+ +          A R  V 
Sbjct: 3   VYSWGRGEDGQLGLGD-----------------TSDQHRPVPI-------DALAERRIV- 37

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           +IACG  H+ V+TD G + T+G G  G+ GHG    +  P     L    + Q+  G +H
Sbjct: 38  QIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYH 97

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           T  ++V G +Y +GG  +G+LG G +   + P L+ET  L+  + + V+CG+RH+ VL E
Sbjct: 98  TAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVET--LKGMQVRQVACGSRHTVVLLE 155

Query: 413 DGQVLSWGWNKYGQLGLGDSI-DRNIPSLVPIHGFLPRNI----ACGWWHTLLLAETTQI 467
           +  V +WG  + G  G GD+   + +P   P+     +NI    ACG +HT  L+E  ++
Sbjct: 156 NKDVYTWGDKENGVSGHGDTEGHQYLPC--PVEELRGKNIVQISACG-FHTAALSEFGEV 212


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 137/275 (49%), Gaps = 29/275 (10%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD  +   P LV    G  I +V  G  HT  ++  G ++ WG G  G+LG G+      
Sbjct: 69  GDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGH-S 127

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           TP+L+  L        + + VRQ                +ACG RH+ V+ +   + T+G
Sbjct: 128 TPYLVETL--------KSMQVRQ----------------VACGSRHTVVLLENKDVYTWG 163

Query: 315 WGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
               G  GHG T   Q  P     L    + QI+A  +HT  +S  G V+ FG  +FG+L
Sbjct: 164 DKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRL 223

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
           G   ++ + V + ++   L  KR K V+CG  H+A +TE G+V +WG  ++GQLG GD +
Sbjct: 224 GHNSERNQPVARFVDA--LAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKV 281

Query: 434 DRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           ++ +P+ V  +   L   I CGW HT+ L +T ++
Sbjct: 282 NKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEV 316



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 170/409 (41%), Gaps = 65/409 (15%)

Query: 22  VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
           VY WG        L  TS +  P+  PI A L      +  CG G    L  +E G++ T
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPV--PIDA-LAERRIVQIACGSGHTVVL--TEEGEVYT 57

Query: 75  WGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
           WG  DD     L  G +G    P         ++ +   G  H  +VT +G++YTWG   
Sbjct: 58  WGRGDD---GRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGM 114

Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA------GEEVVKRRKTSSAR 186
                     +G  G    + TG  +    E       R          V+   K     
Sbjct: 115 ----------YGKLG--HGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTW 162

Query: 187 EESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
            + EN  SG    E     PC V    G  I +++A G HT  LS+ G+V+ +G G  G+
Sbjct: 163 GDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGR 222

Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
           LG  S  +  P    +  L                       AG+  VK++ACGG H+A 
Sbjct: 223 LGHNSE-RNQPVARFVDAL-----------------------AGKR-VKQVACGGFHTAA 257

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           VT+ G + T+G G +GQ GHG   ++  P+   SL++  V QI  G  HTV ++  G VY
Sbjct: 258 VTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVY 317

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
            +G    G+LG        +PK ++  +L+ KR   V+    H+  L +
Sbjct: 318 TWGNGDHGKLGHNDTAKVTLPKPVD--VLDGKRVISVASYNEHTVALVD 364



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 121/240 (50%), Gaps = 35/240 (14%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V+ WG G +GQLGLG                   S + RP+ +          A R  V 
Sbjct: 3   VYSWGRGEDGQLGLGD-----------------TSDQHRPVPI-------DALAERRIV- 37

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           +IACG  H+ V+T+ G + T+G G  G+ GHG    +  P     L    + Q+  G +H
Sbjct: 38  QIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYH 97

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           T  ++V G +Y +GG  +G+LG G +   + P L+ET  L+S + + V+CG+RH+ VL E
Sbjct: 98  TAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPYLVET--LKSMQVRQVACGSRHTVVLLE 155

Query: 413 DGQVLSWGWNKYGQLGLGDSI-DRNIPSLVPIHGFLPRNI----ACGWWHTLLLAETTQI 467
           +  V +WG  + G  G GD+   + +P   P+     ++I    ACG +HT  L+E  ++
Sbjct: 156 NKDVYTWGDKENGVSGHGDTEGHQYLPC--PVEELRGKSIVQISACG-FHTAALSEFGEV 212


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 28/233 (12%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V  WG G +GQLG G          L+P    A  G+D                    + 
Sbjct: 70  VCSWGRGEDGQLGHGD-----TDDRLLPTKLSAFDGQD--------------------IV 104

Query: 293 EIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
            + CG  ++   + +G  + ++GWG +G+ GHG  +D   P    +L  ++++QI+ G  
Sbjct: 105 SVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDC 164

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           H + +++E +V  +G NQ G+LG G  +  +VP+  +    E  R K+V+ GA HS  +T
Sbjct: 165 HCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQ--KILAFEGIRIKMVAAGAEHSVAIT 222

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           EDG +  WGW +YG LGLGD+ DR IP  V I G     ++CGW HT+ ++ +
Sbjct: 223 EDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTISISSS 275



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 29/257 (11%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ-VWGWGYGGEGQL 244
           R E      GD    L P  ++   G  I  V  G  +T+  S  G+ V+ WG+G  G+L
Sbjct: 75  RGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRL 134

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G G      P+   IP           P+   QG            +K+I+CG  H   V
Sbjct: 135 GHGD-----PSDLFIP----------HPIRALQGL----------RIKQISCGDCHCLAV 169

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
           T    +L++G    G+ G G+T D   P    +   I+++ +AAG  H+V I+ +G +Y 
Sbjct: 170 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYG 229

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G  ++G LG G      +P   E   ++  +  +VSCG RH+  ++  G + + GW+KY
Sbjct: 230 WGWGRYGNLGLGDTNDRLIP---EKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKY 286

Query: 425 GQLGLGDSIDRNIPSLV 441
           GQLG GD  D  +P  V
Sbjct: 287 GQLGHGDFEDCLVPRKV 303



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 111/269 (41%), Gaps = 50/269 (18%)

Query: 91  HGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDF 143
           HG+T +   LPT+ S      +V    G  + V+ +++G +VY+WGW           DF
Sbjct: 83  HGDTDDRL-LPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG----------DF 131

Query: 144 GSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
           G  G       F          L  +Q    D       ++ +  S  R ++     G  
Sbjct: 132 GRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTT 191

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
             +  P  +    G++I  VAAG  H++ +++ G ++GWG+G  G LGLG          
Sbjct: 192 KDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGD-----TNDR 246

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           LIP                   VN  G      +  ++CG RH+  ++ +G L T GW  
Sbjct: 247 LIP-----------------EKVNIDGDK----IVMVSCGWRHTISISSSGGLYTHGWSK 285

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
           YGQ GHG   D L P    +L D  + Q+
Sbjct: 286 YGQLGHGDFEDCLVPRKVQALSDKLISQV 314


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 134/261 (51%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H + L+  G+V+ WG G +G+LG G+R+ +   P LI  L         
Sbjct: 3328 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL-EKPKLIETLR-------- 3378

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                               +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3379 ----------------TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLK 3422

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++L D +V Q+A G     T+C++ EG V+ +G   FG+LG G  +  ++P  +E 
Sbjct: 3423 PKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVER 3482

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L       + CGA+ S  LT+ G+V +WG   Y +LG G   D+++    PI G   +
Sbjct: 3483 --LNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHG--TDQHVRKPTPIQGLRGK 3538

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + ++ Q+
Sbjct: 3539 KVIHVAVGALHCLAVTDSGQV 3559



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 130/261 (49%), Gaps = 32/261 (12%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            +P LV     V I KVA  +GG+H L LS  G+V+ WG G +G+LG G+R          
Sbjct: 4452 TPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR---------- 4501

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
                      DRP L+   +++  G      V +IACG  HSA +T  G +LT+G G YG
Sbjct: 4502 -------DSYDRPKLIE--ALSGIG------VIDIACGSAHSACITSQGHVLTWGKGRYG 4546

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
            + GHG + DQL+P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G 
Sbjct: 4547 RLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4606

Query: 378  DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
                 VP  +E+  L       V CG++ S  LT  G V +WG   Y +LG G++     
Sbjct: 4607 SDGCKVPMKIES--LAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRR 4664

Query: 438  PSLV-PIHGFLPRNIACGWWH 457
            P  V  + G    +IA G  H
Sbjct: 4665 PKKVAALQGKKIISIATGSLH 4685



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 101/213 (47%), Gaps = 32/213 (15%)

Query: 212 VKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASG 268
           V I ++AA   GRH L L+  G V+ WG G  G+LG G +  K +PT  ++   E   +G
Sbjct: 628 VNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPT-RIVALAERQVTG 686

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                    + CG  +SA +T AG L T+G G YG+ GHG++ D
Sbjct: 687 -------------------------VFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSED 721

Query: 329 QLRPSYASSLMDIQVEQIAAGL--WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
           +  P+    L   +V  +A G    H++C++  G VY +G   FG+LG G     +VP  
Sbjct: 722 KHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVA 781

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           +E P       KV S G+  S  L  DG V SW
Sbjct: 782 IELPQCSDGAVKVFS-GSHFSVALGRDGTVYSW 813



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 130/317 (41%), Gaps = 53/317 (16%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEV++WG           R+     K+       G         
Sbjct: 4467 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSA 4526

Query: 157  QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             SA  T Q           V+   K    R        GD    L P LV    G +   
Sbjct: 4527 HSACITSQG---------HVLTWGKGRYGR-----LGHGDSEDQLQPKLVEALLGYRAID 4572

Query: 217  VA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
            +A  +G   TL ++D   VW WG G  G+LG G                  + G   P+ 
Sbjct: 4573 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKVPM- 4614

Query: 275  VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
                 + S    G   V ++ CG + S  +T +G++ T+G G Y + GHG+T+   RP  
Sbjct: 4615 ----KIESLAGLG---VTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKK 4667

Query: 335  ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
             ++L   ++  IA G  H V  S  G V+ +G N  GQLG G   A   P+L+++  L+ 
Sbjct: 4668 VAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQRPRLVQS--LQG 4725

Query: 395  KRAKVVSCGARHSAVLT 411
            K    V CG+ H+  L+
Sbjct: 4726 KHIVKVICGSAHTLALS 4742



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 124/265 (46%), Gaps = 36/265 (13%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTP----HLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
            ++GWG+   GQLG   GSRIKM PTP     L+  ++ A   +    +   G + ++G  
Sbjct: 4379 IFGWGHNHRGQLGGLDGSRIKM-PTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4437

Query: 287  G----------------------RSYVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCG 322
                                      +K++A   GG+H   ++  G + ++G G  G+ G
Sbjct: 4438 AGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4497

Query: 323  HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            HG+ +   RP    +L  I V  IA G  H+ CI+ +G V  +G  ++G+LG G  + + 
Sbjct: 4498 HGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL 4557

Query: 383  VPKLLETPILESKRAKVVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
             PKL+E   L   RA  ++CG+  +  L  T+D  V SWG   YG+LG G S    +P  
Sbjct: 4558 QPKLVEA--LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMK 4615

Query: 441  V-PIHGFLPRNIACGWWHTLLLAET 464
            +  + G     + CG   ++ L  +
Sbjct: 4616 IESLAGLGVTKVECGSQFSVALTRS 4640



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 147/362 (40%), Gaps = 48/362 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWA 114
             GG       S+ GKL   G   + G+  L    +  TP+  P+ ++  V K A  +G  
Sbjct: 3280 AGGSKSLFIVSQDGKLYACGEGTN-GRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGK 3338

Query: 115  HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
            H +++T  G+V++WG  E           G  G   + +  K   + T +       A  
Sbjct: 3339 HAMALTLDGKVFSWGEGE----------DGKLGHGNRLTLEKPKLIETLRTKRIRDIACG 3388

Query: 175  EVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLI 226
                   TSS         E      GD    L P LVT     ++ +VA G R   TL 
Sbjct: 3389 SSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLC 3448

Query: 227  LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
            L++ G V+ WG G  G+LG G   +    PH +  L                  N  G  
Sbjct: 3449 LTEEGLVFSWGDGDFGKLGRGGS-EGCSIPHQVERL------------------NGVG-- 3487

Query: 287  GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
                V +I CG + S  +T +G + T+G G Y + GHG+     +P+    L   +V  +
Sbjct: 3488 ----VMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHV 3543

Query: 347  AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
            A G  H + ++  G+VY +G N  GQ G+G       P L+    L+      V+CG+ H
Sbjct: 3544 AVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLG--LDGIFVNRVACGSSH 3601

Query: 407  SA 408
            S 
Sbjct: 3602 SV 3603



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 82/150 (54%), Gaps = 4/150 (2%)

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           C GRH   +T  G + ++G G  G+ GHG T+ +  P+   +L + QV  +  G  ++  
Sbjct: 637 CEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAA 696

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS--CGARHSAVLTED 413
           I+  G +Y +G   +G+LG G  + +++P +++  +L+ +R   V+  CG  HS  +T+ 
Sbjct: 697 ITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQ--VLKQQRVIHVALGCGDAHSLCVTDT 754

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           G V +WG   +G+LG G     ++P  + +
Sbjct: 755 GIVYAWGDGDFGKLGNGTCNGSSVPVAIEL 784



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 134/343 (39%), Gaps = 75/343 (21%)

Query: 32   SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
            +P++ PILS    +       K     G   A+A +  GK+ +WG  +D        GK 
Sbjct: 3316 TPKQVPILSQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3360

Query: 92   G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
            G       E P+         +   A G +H  ++T +GE+YTWG  E          +G
Sbjct: 3361 GHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YG 3410

Query: 145  SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR--KTSSAREESENPASGD-EFFTL 201
              G    + T  +  L T  A   D R  +     R  +T    EE    + GD +F  L
Sbjct: 3411 RLG-HGDNCTQLKPKLVTALA---DHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKL 3466

Query: 202  S---------PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
                      P  V    GV + ++  G + +L L+  G+VW WG G   +LG G+   +
Sbjct: 3467 GRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHV 3526

Query: 253  -VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
              PTP                           G  G+  +  +A G  H   VTD+G + 
Sbjct: 3527 RKPTP-------------------------IQGLRGKKVI-HVAVGALHCLAVTDSGQVY 3560

Query: 312  TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
             +G   +GQ G G+T    +PS    L  I V ++A G  H+V
Sbjct: 3561 AWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSV 3603



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 7/156 (4%)

Query: 308  GALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
            GA   FGWG    GQ G    +    P+   +L  ++  QIA G      ++ +G++Y  
Sbjct: 4375 GASTIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYAT 4434

Query: 366  GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
            G    G+LG G   +   P L+E+      +   V+ G +H   L+ DG+V SWG  + G
Sbjct: 4435 GYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4494

Query: 426  QLGLG--DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +LG G  DS DR  P L+  + G    +IACG  H+
Sbjct: 4495 KLGHGNRDSYDR--PKLIEALSGIGVIDIACGSAHS 4528



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A + SG + TWG  D     +  +  H   P+         ++  A G  HCV+
Sbjct: 4630 GSQFSVALTRSGSVYTWGKGDYHRLGH-GNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4688

Query: 119  VTEAGEVYTWG 129
             ++ GEV+TWG
Sbjct: 4689 CSDGGEVFTWG 4699



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 83/225 (36%), Gaps = 45/225 (20%)

Query: 42  IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPF 98
           IP R+    + + V G  CG  ++ A + +G+L TWG          T G+ G    E  
Sbjct: 672 IPTRIVAL-AERQVTGVFCGSSYSAAITAAGELYTWGRG--------TYGRLGHGNSEDK 722

Query: 99  PLPTEASVVKAA--------AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
            LPT   V+K           G AH + VT+ G VY WG            DFG  G   
Sbjct: 723 HLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWG----------DGDFGKLG--- 769

Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA-----------REESENPASGDEFF 199
            + T   S++P     P       +V      S A           +        G    
Sbjct: 770 -NGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEH 828

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
           T SP  +    G  I  +A G  H L L+  G+++GWG     QL
Sbjct: 829 TASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQL 873



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 7/88 (7%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G  F++A    G + +WG        +  S +H  +P+        ++V  A G AHC++
Sbjct: 797 GSHFSVALGRDGTVYSWGKGHGGRLGHGHS-EHTASPKAIQALEGKNIVDLAVGLAHCLA 855

Query: 119 VTEAGEVYTWGWRE----CVPSAKVTRD 142
           +T +GE+Y WG  +    C P   VTRD
Sbjct: 856 LTASGELYGWGRNDFQQLCPPC--VTRD 881


>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 389

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 170/418 (40%), Gaps = 94/418 (22%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  + G+L TWG        +    K   +P P        +V+AA G  HC++V + 
Sbjct: 53  SLAICDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDK 112

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G  Y WG  E          +G  G                   P  K  G   ++R   
Sbjct: 113 GRAYAWGGNE----------YGQCGE-----------------EPERKEDGTRALRRDIP 145

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
           +  R                 C + L    K+ +VAAGG H+++L+  G VW WG     
Sbjct: 146 TPQR-----------------CALKL----KVQQVAAGGTHSVVLTQEGHVWTWG----- 179

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           Q      IK + TP  +  LE                           V  IA G  H+ 
Sbjct: 180 QPWPPGDIKQISTPVRVQGLEK--------------------------VMMIAVGAFHNL 213

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +++   L  +G   YGQ G G T  + +P     L  + +  IAAG WH+  ++ +G V
Sbjct: 214 ALSEDAVLWAWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEV 273

Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           Y +G  + G+LG G D++ + VP  L+  +L+ +    VSCG  HS  LT DG++ S+G 
Sbjct: 274 YAWGRGEHGRLGFGDDKSSHMVP--LKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSYGR 331

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRN------------IACGWWHTLLLAETTQI 467
             +G+LG G  +    P  VP++   P+             +ACG  HTL +   T +
Sbjct: 332 GDHGRLGYGRKVTTGHPMEVPLNLPPPKTSAGPDGLWQANFVACGGRHTLAIVTWTDM 389



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 54/231 (23%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAG 349
           V  +  G R+S  + D G L T+GW   G  GH   T  +  P+   +L  +++ Q A G
Sbjct: 43  VSAVVAGSRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIG 102

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV------VSCG 403
            WH + +  +GR Y +GGN++GQ G   ++ E+  + L   I   +R  +      V+ G
Sbjct: 103 GWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCALKLKVQQVAAG 162

Query: 404 ARHSAVLTEDGQVLSWG--W---------------------------------------- 421
             HS VLT++G V +WG  W                                        
Sbjct: 163 GTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVMMIAVGAFHNLALSEDAVLW 222

Query: 422 ----NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
               N+YGQLG+GD+  R+ P  V  + G    +IA G WH+  L +  ++
Sbjct: 223 AWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEV 273



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 131/357 (36%), Gaps = 47/357 (13%)

Query: 17  CKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
           C +  ++ WG+      G  PE     SP P     G        GG    LA  + G+ 
Sbjct: 57  CDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGW-HCLAVDDKGRA 115

Query: 73  ITWGS-------ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
             WG         + E +   T     + P P     +  V + AAG  H V +T+ G V
Sbjct: 116 YAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCALKLKVQQVAAGGTHSVVLTQEGHV 175

Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
           +TWG  +  P   + +      S      G +  +        +    E+ V     +  
Sbjct: 176 WTWG--QPWPPGDIKQI-----STPVRVQGLEKVMMIAVGAFHNLALSEDAV---LWAWG 225

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
             E      GD      P  V    G+ +  +AAGG H+  L+  G+V+ WG G  G+LG
Sbjct: 226 NNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLG 285

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
            G       + H++P       G+D                    + +++CGG HS  +T
Sbjct: 286 FGDD----KSSHMVPLKVQLLDGED--------------------IVQVSCGGTHSVALT 321

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGR 361
             G + ++G G +G+ G+G       P     +L   +      GLW    ++  GR
Sbjct: 322 SDGRIFSYGRGDHGRLGYGRKVTTGHPMEVPLNLPPPKTSAGPDGLWQANFVACGGR 378



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 362 VYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           V  +G  + GQLG G  D+ +   ++     L+      V  G+R+S  + +DG++ +WG
Sbjct: 10  VLAWGSGEDGQLGMGGCDEKDWAHRVAA---LDPYAVSAVVAGSRNSLAICDDGRLFTWG 66

Query: 421 WNKYGQLG 428
           WN+ G LG
Sbjct: 67  WNQRGTLG 74


>gi|224031923|gb|ACN35037.1| unknown [Zea mays]
          Length = 220

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 89/148 (60%), Gaps = 2/148 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +ACG RH+  V+D+G L T+GW  YGQ GHG   D L P    +L D  + QI+ G  HT
Sbjct: 4   VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHT 63

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           + ++ EG++Y +G N+FGQ+G G +   + P  +  P  E ++   V+CG RH+  L+E 
Sbjct: 64  MALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFP--EDQKISQVACGWRHTLALSEK 121

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
             V SWG    GQLG G+ +DRN P L+
Sbjct: 122 KNVFSWGRGTSGQLGNGEIVDRNTPVLI 149



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 11/127 (8%)

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           +A G  HT+ +S  G +Y +G +++GQLG G  +   VP  +E   L+      +S G R
Sbjct: 4   VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEA--LKDSTISQISGGWR 61

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----IACGWWHTLL 460
           H+  LT +G++  WGWNK+GQ+G+G++ D + P  V      P +     +ACGW HTL 
Sbjct: 62  HTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVS----FPEDQKISQVACGWRHTLA 117

Query: 461 LAETTQI 467
           L+E   +
Sbjct: 118 LSEKKNV 124



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 25/172 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           VA G RHT+ +SD G ++ +G+   GQLG G     +  PH +  L+             
Sbjct: 4   VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL-VPHKVEALKD------------ 50

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                       S + +I+ G RH+  +T  G L  +GW  +GQ G G+ +D   P   S
Sbjct: 51  ------------STISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVS 98

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              D ++ Q+A G  HT+ +S +  V+ +G    GQLG G     N P L++
Sbjct: 99  FPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLID 150



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 79/205 (38%), Gaps = 60/205 (29%)

Query: 60  CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           CG+   +  S+SG L T+G +   GQ      +    P       ++++ + + GW H +
Sbjct: 6   CGWRHTITVSDSGNLYTYGWSK-YGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTM 64

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
           ++T  G++Y WGW +          FG  G    D      + P + + P D+       
Sbjct: 65  ALTSEGKLYGWGWNK----------FGQVGVGNND----DHSSPGQVSFPEDQ------- 103

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
                                              KI++VA G RHTL LS+   V+ WG
Sbjct: 104 -----------------------------------KISQVACGWRHTLALSEKKNVFSWG 128

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCL 262
            G  GQLG G  +    TP LI  L
Sbjct: 129 RGTSGQLGNGEIVDR-NTPVLIDAL 152



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWH 457
           +V+CG RH+  +++ G + ++GW+KYGQLG GD  D  +P  V  +       I+ GW H
Sbjct: 3   LVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRH 62

Query: 458 TLLL 461
           T+ L
Sbjct: 63  TMAL 66



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 25/144 (17%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD    L P  V       I++++ G RHT+ L+  G+++GWG+   GQ+G+G+      
Sbjct: 34  GDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNND---- 89

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                   +H++ G        Q S     K     + ++ACG RH+  +++   + ++G
Sbjct: 90  --------DHSSPG--------QVSFPEDQK-----ISQVACGWRHTLALSEKKNVFSWG 128

Query: 315 WGLYGQCGHGSTNDQLRPSYASSL 338
            G  GQ G+G   D+  P    +L
Sbjct: 129 RGTSGQLGNGEIVDRNTPVLIDAL 152



 Score = 38.9 bits (89), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           GG    +A +  GKL  WG  +  GQ  + +     +P     P +  + + A GW H +
Sbjct: 58  GGWRHTMALTSEGKLYGWG-WNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTL 116

Query: 118 SVTEAGEVYTWG 129
           +++E   V++WG
Sbjct: 117 ALSEKKNVFSWG 128


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 133/274 (48%), Gaps = 34/274 (12%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V     + +T++AAG  H  +L+  G V   G+ G GQLG G+  K + TP  I  L
Sbjct: 63  PSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSGQLGHGNN-KSISTPKKIESL 121

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           ++          +R   ++S            A G  + A+++  G L T G+  YGQ G
Sbjct: 122 KN----------IRITHISS------------ANGCENLAIISQDGKLYTCGYNNYGQLG 159

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR--------VYVFGGNQFGQLG 374
           HG+ ++   P+   +L D QV  ++   +H++ ++ + R        VY  G N  GQLG
Sbjct: 160 HGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQLG 219

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
                 E  PK++ +  L +++    +CG  HS  +T  G+V S G+N  GQLG  D+  
Sbjct: 220 QEHTCHEITPKIIRS--LNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKS 277

Query: 435 RNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           RN P L+  +        ACG++HTL+  +T +I
Sbjct: 278 RNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEI 311



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 144/352 (40%), Gaps = 96/352 (27%)

Query: 211 GVKITKV--AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE----- 263
            ++IT +  A G  +  I+S  G+++  GY   GQLG G++  +  TP L+  L+     
Sbjct: 123 NIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGHGTQSNL-STPTLVQALKDTQVT 181

Query: 264 HAASGKDRPLLV----RQGS----------VNSSGKAGRSY-----------------VK 292
           + +      L+V    RQ S           N +G+ G+ +                 V 
Sbjct: 182 NVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVI 241

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           + ACG  HS  VT  G + + G+   GQ GH  T  + +P    SL +  + Q A G +H
Sbjct: 242 QTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYH 301

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVD--------------------------------QA 380
           T+     G +Y FG N  GQLG   +                                Q 
Sbjct: 302 TLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQE 361

Query: 381 ENVPK-------------LLETPILESKRAKV-----------VSCGARHSAVLTEDGQV 416
            N P              L E+  L +++ +V           ++CG  HS  L E GQ+
Sbjct: 362 HNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQL 421

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            ++G   +GQLG G++ D+ +P  V  +H      IA G++HT++L +  ++
Sbjct: 422 FTFGRGNHGQLGQGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKV 473



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 5/178 (2%)

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           SY +     G      T A  +  FG   YG+ G G   ++  PS      ++ V QIAA
Sbjct: 20  SYSRTEGVNGNQKISGTGAPLVFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAA 79

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARH 406
           G  H   ++  G V   G N  GQLG G +++ + PK +E+  L++ R   +S   G  +
Sbjct: 80  GNEHIAVLTRNGDVLTVGFNGSGQLGHGNNKSISTPKKIES--LKNIRITHISSANGCEN 137

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
            A++++DG++ + G+N YGQLG G   + + P+LV  +      N++C ++H+L++ +
Sbjct: 138 LAIISQDGKLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQ 195



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 50/265 (18%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI--- 259
           P L+       I + A G  HTL+  D G+++ +G   +GQLG+ +  + +  P  I   
Sbjct: 281 PVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEF 340

Query: 260 ---PCLEHAASGKDRPLLVRQGSVNSSGKAGRS--------------------------- 289
                ++H+   +++    ++ +  SS   G S                           
Sbjct: 341 LTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKV 400

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
            + +IACG  HS  + ++G L TFG G +GQ G G+T DQ  P   +SL D +V  IA G
Sbjct: 401 NISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLHDKKVIGIAGG 460

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE-TPILESK-----------RA 397
            +HT+ +  + +V         QL T + +  N P   + T I+ES+           R 
Sbjct: 461 FYHTIVLVKQKKV-----KGISQLSTDMKKIINEPSRADVTFIVESRPLHAHRCILFARC 515

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWN 422
           + +    R S   +E+   + WG N
Sbjct: 516 RSIEEKIRQSCRRSEERDKMRWGIN 540



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 100/246 (40%), Gaps = 27/246 (10%)

Query: 18  KETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITW 75
           ++T VY  G        +      I  ++    + + V    CG   ++  +  G++ + 
Sbjct: 203 QQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSC 262

Query: 76  GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR---- 131
           G  +D GQ      K    P          +V+AA G+ H +   + GE+Y +G      
Sbjct: 263 G-FNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQ 321

Query: 132 -------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPT--EQAPPSDKRAGEEVVKRRKT 182
                  + +   K  ++F +  + Q  S G Q+ L +  E   PS +  GE        
Sbjct: 322 LGIETNGQALIQPKQIQEFLTVSNIQH-SGGNQNQLHSGQEHNQPSSQSLGE-------- 372

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
           S A  +    A  +      P +  L+  V I+K+A G  H++ L + GQ++ +G G  G
Sbjct: 373 SGAIMQG--LAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHG 430

Query: 243 QLGLGS 248
           QLG G+
Sbjct: 431 QLGQGN 436


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 119/249 (47%), Gaps = 28/249 (11%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           K A G  HTL++++ GQ++ WG   EGQLGL      +  P ++  L             
Sbjct: 88  KAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTL------------- 134

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSY 334
                      G   + +IACG +HS  +T+ G L  +G    GQ G GS T  +L+P  
Sbjct: 135 -----------GTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKL 183

Query: 335 ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
             SL  + +  +A G +HT+ IS  G V+ +G N FGQLG    Q  NVP  L T  L +
Sbjct: 184 VHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQLRT--LRN 241

Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIAC 453
            R    +CG   S  LT DG V + G   YGQLG G+     +P  ++ + G     I+C
Sbjct: 242 SRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISC 301

Query: 454 GWWHTLLLA 462
           G  HTL L 
Sbjct: 302 GRRHTLALV 310



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 31/231 (13%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I ++A G +H++ L++ G+++ WG   +GQLGLGS  KM   P L+  L           
Sbjct: 139 IVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVP------- 191

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                            +  +ACGG H+ V++ +GA+  +G   +GQ G     ++  P 
Sbjct: 192 -----------------IAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPC 234

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
              +L + +V   A G   +V ++++G V+  G   +GQLG G   +E +P+     I+E
Sbjct: 235 QLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPR----QIME 290

Query: 394 SKRAKV--VSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              + V  +SCG RH+ A++   G+V +WG    GQLG   + +   P +V
Sbjct: 291 LMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVV 341



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 146/380 (38%), Gaps = 76/380 (20%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH-- 91
           E   I +P        +  + +  G   + +A ++ G++ + G+ +D GQ     G+   
Sbjct: 18  EDENIFTPREVNFEKANEIEQIACGD-NYTIAVTKEGQVYSCGN-NDHGQLGQEKGRKRL 75

Query: 92  ----GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
               G  P  F         KAA G +H + V E G++++WG                  
Sbjct: 76  QLISGIDPLAFR--------KAACGSSHTLVVNEWGQLFSWG------------------ 109

Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR-----RKTSSAREESENPASG------- 195
           S  +   G      T + P   K  G +++ +     + + +     E  A G       
Sbjct: 110 SNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQL 169

Query: 196 ----DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
               D    L P LV     V I  VA GG HT+++S  G V+ WG    GQLGL     
Sbjct: 170 GLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSD--- 226

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
                            ++ P  +R            S V   ACG   S  +T  G + 
Sbjct: 227 --------------IQNRNVPCQLR--------TLRNSRVCYAACGEEFSVFLTMDGGVF 264

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQF 370
           T G G+YGQ GHG+   ++ P     LM   V QI+ G  HT+  +   GRVY +G    
Sbjct: 265 TCGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGA 324

Query: 371 GQLGTGVDQAENVPKLLETP 390
           GQLG  + Q    P+++  P
Sbjct: 325 GQLGNRIAQNSTTPQVVFGP 344



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 96/177 (54%), Gaps = 7/177 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +++IACG  ++  VT  G + + G   +GQ G      +L+    S +  +   + A G 
Sbjct: 36  IEQIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRKRLQ--LISGIDPLAFRKAACGS 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            HT+ ++  G+++ +G N  GQLG   V      P++++T  L +K    ++CG +HS  
Sbjct: 94  SHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKT--LGTKIIVQIACGLKHSIA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVPIHGFLP-RNIACGWWHTLLLAET 464
           LT +G++ +WG N  GQLGLG      + P LV     +P   +ACG +HT++++++
Sbjct: 152 LTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKS 208



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 12/162 (7%)

Query: 313 FGWG--LYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           F WG  ++G+ G G   D+    P   +     ++EQIA G  +T+ ++ EG+VY  G N
Sbjct: 2   FCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNN 61

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             GQLG    Q +   +L     ++    +  +CG+ H+ V+ E GQ+ SWG N  GQLG
Sbjct: 62  DHGQLG----QEKGRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLG 117

Query: 429 LGDSIDRNI--PSLVPIHGF-LPRNIACGWWHTLLLAETTQI 467
           L D +   I  P +V   G  +   IACG  H++ L    ++
Sbjct: 118 L-DRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGEL 158



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 7/109 (6%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           ++ +G    G+LG G  + EN+    E    ++   + ++CG  ++  +T++GQV S G 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLP---RNIACGWWHTLLLAETTQI 467
           N +GQLG      R    L  I G  P   R  ACG  HTL++ E  Q+
Sbjct: 61  NDHGQLGQEKGRKR----LQLISGIDPLAFRKAACGSSHTLVVNEWGQL 105


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H + L+  G+V+ WG G +G+LG G+R+ +   P LI  L         
Sbjct: 2979 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL-EKPKLIESLR-------- 3029

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                               V++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3030 ----------------TKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLK 3073

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++L   +V Q+A G     T+C++ EG V+ +G   FG+LG G  +  +VP  +E 
Sbjct: 3074 PKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVER 3133

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L S     + CGA+ S  LT+ G+V +WG   Y +LG G   D+++    PI G   +
Sbjct: 3134 --LNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHG--TDQHVRKPTPIQGLRGK 3189

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + ++ Q+
Sbjct: 3190 KVIHVAVGALHCLAVTDSGQV 3210



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 170/371 (45%), Gaps = 50/371 (13%)

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           A  ++  V+ +++ +++T GW  C P       +G        +T    ++P   A   +
Sbjct: 464 AGNYSTKVNKSKSQKIFTLGWSSCSPEM-----YGFMSEATNGTTQLMGSIPRYSAATIE 518

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL--------SPCLVTLNPGVKITKVAAG- 220
             +  +V   R+ +          +G + F+L        +P       GV + ++AA  
Sbjct: 519 LPSTLQV---RQVACTENNIYILTTGGQVFSLHSNSSENIAPKAFEGLEGVHVVQIAAHC 575

Query: 221 -GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
            G+H ++LS   +VW WG G  G+LG G  +                  K+ P ++    
Sbjct: 576 EGKHVMVLSSANEVWSWGAGDGGRLGHGDTV-----------------SKEHPTMIV--- 615

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                      V  I CG  +SA +T AG L T+G G YG+ GHG+++D+L P+   +L 
Sbjct: 616 -----GLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALK 670

Query: 340 DIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
             +V  +A  +G  H++C++  G ++ +G   FG+LG G      +P  ++T +  S+  
Sbjct: 671 SYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVNVSR-- 728

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWW 456
             +  G++ S  L+ DG + +WG    G+LG G+S   N+P LV  + G    ++A G  
Sbjct: 729 --IYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSA 786

Query: 457 HTLLLAETTQI 467
           H L L  + ++
Sbjct: 787 HCLALTSSGEL 797



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 136/271 (50%), Gaps = 32/271 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            +P LV     V I KVA  +GG+H L LS  G+V+ WG G +G+LG G+R          
Sbjct: 4012 APTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR---------- 4061

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
                      DRP L+   +++  G      V +IACG  HSA +T  G +LT+G G YG
Sbjct: 4062 -------DSYDRPKLIE--ALSGIG------VIDIACGSAHSACITSQGHVLTWGKGRYG 4106

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
            + GHG + DQL+P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G 
Sbjct: 4107 RLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4166

Query: 378  DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
                 +P  +E+  L       V CG++ S  LT  G V +WG   Y +LG G++     
Sbjct: 4167 SDGCKIPMKIES--LAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRR 4224

Query: 438  PSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            P  V  + G    +IA G  H +  +++ ++
Sbjct: 4225 PKKVAALQGKKIISIATGSLHCVACSDSGEV 4255



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 130/317 (41%), Gaps = 53/317 (16%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEV++WG           R+     K+       G         
Sbjct: 4027 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSA 4086

Query: 157  QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             SA  T Q           V+   K    R        GD    L P LV    G +   
Sbjct: 4087 HSACITSQG---------HVLTWGKGRYGR-----LGHGDSEDQLQPKLVEALLGYRAID 4132

Query: 217  VA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
            +A  +G   TL ++D   VW WG G  G+LG G                  + G   P+ 
Sbjct: 4133 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKIPMK 4175

Query: 275  VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
            +          AG   +K + CG + S  +T +G++ T+G G Y + GHG+T+   RP  
Sbjct: 4176 IE-------SLAGLGVIK-VECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKK 4227

Query: 335  ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
             ++L   ++  IA G  H V  S  G V+ +G N  GQLG G   A   P+L+++  L+ 
Sbjct: 4228 VAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQS--LQG 4285

Query: 395  KRAKVVSCGARHSAVLT 411
            K    V CG+ H+  L+
Sbjct: 4286 KHIVKVICGSAHTLALS 4302



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 114/238 (47%), Gaps = 35/238 (14%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTP----HLIPCLEHAASGKDRPLLVRQGSVNSSG-- 284
            ++GWG+   GQLG   GSRIKM PTP     L+  ++ A   +    +   G + ++G  
Sbjct: 3939 IFGWGHNHRGQLGGLDGSRIKM-PTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 3997

Query: 285  --------------------KAGRSYVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCG 322
                                      +K++A   GG+H   ++  G + ++G G  G+ G
Sbjct: 3998 AGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4057

Query: 323  HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            HG+ +   RP    +L  I V  IA G  H+ CI+ +G V  +G  ++G+LG G  + + 
Sbjct: 4058 HGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL 4117

Query: 383  VPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
             PKL+E   L   RA  ++CG+    +  +T+D  V SWG   YG+LG G S    IP
Sbjct: 4118 QPKLVEA--LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIP 4173



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 147/362 (40%), Gaps = 48/362 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWA 114
             GG       S+ GKL   G   + G+  L    +  TP   P+  +  V K A  +G  
Sbjct: 2931 AGGSKSLFIVSQDGKLYACGEGTN-GRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGK 2989

Query: 115  HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
            H +++T  G+V++WG  E           G  G   + +  K   + + +       A  
Sbjct: 2990 HAMALTLDGKVFSWGEGE----------DGKLGHGNRLTLEKPKLIESLRTKRVRDIACG 3039

Query: 175  EVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLI 226
                   TSS         E      GD    L P LVT   G ++ +VA G R   TL 
Sbjct: 3040 SSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLC 3099

Query: 227  LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
            L++ G V+ WG G  G+LG G   +    PH +  L                  NS G  
Sbjct: 3100 LTEEGLVFSWGDGDFGKLGRGGS-EGCSVPHQVERL------------------NSVG-- 3138

Query: 287  GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
                V +I CG + S  +T +G + T+G G Y + GHG+     +P+    L   +V  +
Sbjct: 3139 ----VMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHV 3194

Query: 347  AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
            A G  H + ++  G+VY +G N  GQ G+G       P L+    L+      V+CG+ H
Sbjct: 3195 AVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLG--LDGVFVNRVACGSSH 3252

Query: 407  SA 408
            S 
Sbjct: 3253 SV 3254



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 89/214 (41%), Gaps = 35/214 (16%)

Query: 201 LSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L P  V      K+  VA  +G  H++ ++D G ++ WG G  G+LG GS     P P  
Sbjct: 661 LVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGS-CNGSPIPVQ 719

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I  L                 VN         V  I  G + S  ++  G L T+G G  
Sbjct: 720 IDTL-----------------VN---------VSRIYSGSQFSVALSCDGTLYTWGKGHG 753

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL---GT 375
           G+ GHG++     P    +L   ++  +A G  H + ++  G +Y +G N + Q+   G 
Sbjct: 754 GRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICPSGV 813

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
             D   + P L   P L   R   ++CGA  S V
Sbjct: 814 SRDPIIHSPILTTPPTL---RISGMTCGAAQSIV 844



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 7/156 (4%)

Query: 308  GALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
            GA   FGWG    GQ G    +    P+   +L  ++  QIA G      ++ +G++Y  
Sbjct: 3935 GASTIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYAT 3994

Query: 366  GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
            G    G+LG G   + + P L+E+      +   V+ G +H   L+ DG+V SWG  + G
Sbjct: 3995 GYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4054

Query: 426  QLGLG--DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +LG G  DS DR  P L+  + G    +IACG  H+
Sbjct: 4055 KLGHGNRDSYDR--PKLIEALSGIGVIDIACGSAHS 4088



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 78/222 (35%), Gaps = 66/222 (29%)

Query: 46   LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
            L G  +    CG G    L  ++   + +WG  D     Y   G+ G      P+  E+ 
Sbjct: 4125 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESL 4179

Query: 105  ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
                V+K   G    V++T +G VYTWG            D+   G    D         
Sbjct: 4180 AGLGVIKVECGSQFSVALTRSGSVYTWG----------KGDYHRLGHGNTDH-------- 4221

Query: 162  TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
                           V+R K  +A +                       G KI  +A G 
Sbjct: 4222 ---------------VRRPKKVAALQ-----------------------GKKIISIATGS 4243

Query: 222  RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             H +  SD G+V+ WG   EGQLG G+ +  +  P L+  L+
Sbjct: 4244 LHCVACSDSGEVFTWGDNDEGQLGDGT-VTAIQRPRLVQSLQ 4284



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 10/108 (9%)

Query: 40  SPIPARLCGGDSWKDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
           SPIP ++   D+  +V     G  F++A S  G L TWG     G+    + +H   P+ 
Sbjct: 714 SPIPVQI---DTLVNVSRIYSGSQFSVALSCDGTLYTWGKGHG-GRLGHGNSEHSNVPKL 769

Query: 98  FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRD 142
                   +   A G AHC+++T +GE+Y WG   +++  PS  V+RD
Sbjct: 770 VRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICPSG-VSRD 816



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 61/221 (27%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVK 108
           K VCG  CG  ++ A + +G+L TWG          T G+  HG + +   +PT+   +K
Sbjct: 620 KQVCGIYCGASYSAAITIAGELFTWGRG--------TYGRLGHGNSDDKL-VPTQVQALK 670

Query: 109 A--------AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
           +         +G AH + VT+ G ++ WG            DFG  G    + +   S +
Sbjct: 671 SYKVVDVALGSGDAHSMCVTDNGLLFAWG----------DGDFGKLG----NGSCNGSPI 716

Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSP 203
           P +          + +V   +  S  + S   +     +T                   P
Sbjct: 717 PVQI---------DTLVNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVP 767

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
            LV    G KI  VA G  H L L+  G+++GWG     Q+
Sbjct: 768 KLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQI 808


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 136/269 (50%), Gaps = 28/269 (10%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-V 253
           GDE     P LV    G  + +V+ G +HT IL + G+V+ +G G  GQLG G+ +   V
Sbjct: 22  GDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANV 81

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
            TP L+  L+                    GK    +VK++ACG  H+  + D G L T+
Sbjct: 82  STPALVSALQ--------------------GK----HVKQVACGWHHTCALIDNGQLYTW 117

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G G YG+ GHG    Q  P    SL   +V  +AAG +H+  I   G +  +GG  FGQL
Sbjct: 118 GSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQL 177

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
           G G +     PK+++   ++   A  V+CG  H+ +LT+  +V +WG  ++G+LG+GD  
Sbjct: 178 GHGDETDRKTPKMVKG--VQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEE 235

Query: 434 DRNIPSLV-PIHGFLPRNIACGWWHTLLL 461
               P ++  + G    +I+ G +H+  L
Sbjct: 236 KHAEPIMITALQGVGVIHISTGGFHSAAL 264



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 108/180 (60%), Gaps = 5/180 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS--TNDQLRPSYASSLMDIQVEQIAA 348
           V++++CG +H+A++ + G + TFG G +GQ G G+  T +   P+  S+L    V+Q+A 
Sbjct: 41  VRQVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVAC 100

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G  HT  +   G++Y +G  ++G+LG G +  +  PKL+E+  L+ K    V+ G  HS+
Sbjct: 101 GWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVES--LQGKEVTFVAAGGFHSS 158

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           V+ E G +L+WG   +GQLG GD  DR  P +V  +   +   +ACG  HTL+L ++ ++
Sbjct: 159 VIIEGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEV 218



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 1/155 (0%)

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           + ++G G+ GQ GHG    Q +P    + +   V Q++ G  HT  +   G V+ FG   
Sbjct: 8   VYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGN 67

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
           FGQLG G     NV        L+ K  K V+CG  H+  L ++GQ+ +WG  +YG+LG 
Sbjct: 68  FGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGH 127

Query: 430 GDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           GD + +  P LV  + G     +A G +H+ ++ E
Sbjct: 128 GDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIE 162



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 6/116 (5%)

Query: 356 ISVEG-RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
           +S EG  VY +G    GQLG G ++ +  P+L+   +  + R   VSCG +H+A+L E+G
Sbjct: 1   MSREGSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQ--VSCGNQHTAILMENG 58

Query: 415 QVLSWGWNKYGQLGLGDSIDRNI--PSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           +V ++G   +GQLG G S+  N+  P+LV  + G   + +ACGW HT  L +  Q+
Sbjct: 59  EVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQL 114



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 37/201 (18%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
           A  ++G+L TWGS +     Y   G   E  +  P   E+     V   AAG  H   + 
Sbjct: 107 ALIDNGQLYTWGSGE-----YGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVII 161

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR--AGEEVVK 178
           E G + TWG                 G F +   G ++   T +     ++  A E    
Sbjct: 162 EGGNLLTWG----------------GGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACG 205

Query: 179 RRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
              T    +  E              GDE     P ++T   GV +  ++ GG H+  L+
Sbjct: 206 THHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALT 265

Query: 229 DMGQVWGWGYGGEGQLGLGSR 249
             G ++ WG G +GQLG G  
Sbjct: 266 SEGVLYTWGGGDKGQLGHGDE 286


>gi|226311363|ref|YP_002771257.1| hypothetical protein BBR47_17760 [Brevibacillus brevis NBRC 100599]
 gi|226094311|dbj|BAH42753.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 323

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 127/255 (49%), Gaps = 20/255 (7%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVPTPH 257
           P LV    GV  TK+AAG  H+L L   G VWGWG+ G+GQLG  +       K V    
Sbjct: 73  PVLVKGLTGV--TKIAAGSSHSLALKSDGTVWGWGWNGKGQLGNNTTTSSNISKPVQAVG 130

Query: 258 LIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGR----SYVKEIACGGRHSAVVTDAG 308
           L   ++ AA       L + G+V     NS+    R    + V+ IA  G H+  V   G
Sbjct: 131 LTDVIDIAAGDAHGLALKKDGTVWIWGSNSTNLPTRVESLTDVRAIAAAGAHNLTVKKDG 190

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            + ++GW  YGQ G  +T  +  P+  S+L +I    +AAG  H++ + VEG+VY +GGN
Sbjct: 191 TVWSWGWNGYGQLGINNTGSKDVPTKVSNLSNI--VSVAAGFHHSLALDVEGKVYAWGGN 248

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            +GQ+G G     N P  +E P L           + H+  L +DG V +WG    GQLG
Sbjct: 249 TYGQVGDGTTTQRNAP--VEVPSLVDIVEIASGSYSYHTLALKKDGTVYAWGLGTSGQLG 306

Query: 429 LGDSIDRNIPSLVPI 443
            G + + NIP  V I
Sbjct: 307 NGTTTNSNIPIQVNI 321


>gi|330792530|ref|XP_003284341.1| hypothetical protein DICPUDRAFT_148108 [Dictyostelium purpureum]
 gi|325085687|gb|EGC39089.1| hypothetical protein DICPUDRAFT_148108 [Dictyostelium purpureum]
          Length = 448

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 187/420 (44%), Gaps = 68/420 (16%)

Query: 53  KDVCGGGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVV--K 108
            D+ GGG    +  +  G L T+GS D    G   L + K+  TP+P       S+    
Sbjct: 43  NDIVGGG-SHTMMVANDGDLYTFGSNDCGQLGFKLLENQKYITTPQPVDYFKNNSIKIKN 101

Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
            + GW+H ++    G VY+WG       +++   F +  + +K+   +Q  +  +    +
Sbjct: 102 CSGGWSHSLACDVNGFVYSWGSNS---HSQLGLTFNAIDTTEKEKKPQQLPIKIDSNNNN 158

Query: 169 DKRAGEEVVKR------RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
           +  +  EV ++         +  +E   NP + + F         +N  +KI  V+ G R
Sbjct: 159 NNNSNTEVKRKIVFKKKIINNINKENQFNPININYF---------INEKIKIISVSCGMR 209

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           H+++LS   +V+GWG    GQL    +  +   P L   LE    G              
Sbjct: 210 HSIVLSSDFKVYGWGCNKFGQLSNNVQGVLQELPKL---LEFGGEG-------------- 252

Query: 283 SGKAGRSYVKEIACGGRHSAVV-TDAGALLTFGWGLYGQCGHGSTNDQ-------LRPSY 334
                   V +I+CG +H+ ++ T    L+TFG+  YGQ G+G+T DQ       + P  
Sbjct: 253 --------VSQISCGFKHTVLLDTTKKKLITFGFNRYGQLGNGNTTDQSQPVIIPIEPIL 304

Query: 335 ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-----QAENVPKLLET 389
                 + V++I  G  ++  ++ +G++Y+ G  ++G LG   D       +N+ K+L++
Sbjct: 305 NDGDCSVIVKEIQCGWSNSCFLTNQGKLYLCGRGEYGILGDERDLTVDLSVQNIFKVLKS 364

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-------GDSIDRNIPSLVP 442
               S+     S G+ H  +  E+  + S GWN++ QLGL        D  +++IP L+P
Sbjct: 365 KPFNSEPISSFSMGSEHVLIQLENNDIYSVGWNEHYQLGLCEVVIPGKDGDNKSIPQLLP 424



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 113/289 (39%), Gaps = 76/289 (26%)

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           +V+ WG G  GQLGLG+    V +P L+              L+    +          V
Sbjct: 5   KVFSWGSGNLGQLGLGNTDDSVSSPSLV--------------LLSNNEIRK--------V 42

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-----RPSYASSLMDIQVEQI 346
            +I  GG H+ +V + G L TFG    GQ G     +Q      +P        I+++  
Sbjct: 43  NDIVGGGSHTMMVANDGDLYTFGSNDCGQLGFKLLENQKYITTPQPVDYFKNNSIKIKNC 102

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLG---TGVDQAENVPKLLETPI------------ 391
           + G  H++   V G VY +G N   QLG     +D  E   K  + PI            
Sbjct: 103 SGGWSHSLACDVNGFVYSWGSNSHSQLGLTFNAIDTTEKEKKPQQLPIKIDSNNNNNNNS 162

Query: 392 -LESKRAKV--------------------------------VSCGARHSAVLTEDGQVLS 418
             E KR  V                                VSCG RHS VL+ D +V  
Sbjct: 163 NTEVKRKIVFKKKIINNINKENQFNPININYFINEKIKIISVSCGMRHSIVLSSDFKVYG 222

Query: 419 WGWNKYGQLGLG-DSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQ 466
           WG NK+GQL      + + +P L+   G     I+CG+ HT+LL  T +
Sbjct: 223 WGCNKFGQLSNNVQGVLQELPKLLEFGGEGVSQISCGFKHTVLLDTTKK 271



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 44/267 (16%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           N  +KI   + G  H+L     G V+ WG     QLGL        T + I   E     
Sbjct: 94  NNSIKIKNCSGGWSHSLACDVNGFVYSWGSNSHSQLGL--------TFNAIDTTEKEKKP 145

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
           +  P+ +   + N++        K +      + +  +                     +
Sbjct: 146 QQLPIKIDSNNNNNNNSNTEVKRKIVFKKKIINNINKE---------------------N 184

Query: 329 QLRPSYASSLMD--IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA-ENVPK 385
           Q  P   +  ++  I++  ++ G+ H++ +S + +VY +G N+FGQL   V    + +PK
Sbjct: 185 QFNPININYFINEKIKIISVSCGMRHSIVLSSDFKVYGWGCNKFGQLSNNVQGVLQELPK 244

Query: 386 LLETPILESKRAKVVSCGARHSAVL-TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
           LLE      +    +SCG +H+ +L T   +++++G+N+YGQLG G++ D++ P ++PI 
Sbjct: 245 LLE---FGGEGVSQISCGFKHTVLLDTTKKKLITFGFNRYGQLGNGNTTDQSQPVIIPIE 301

Query: 445 GFLP--------RNIACGWWHTLLLAE 463
             L         + I CGW ++  L  
Sbjct: 302 PILNDGDCSVIVKEIQCGWSNSCFLTN 328


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 133/256 (51%), Gaps = 37/256 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + ++A G  H+ ++++ G+++ +G    GQLGLG   K +  P  +  L        +P 
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLG-HTKSLNKPSFVKPL--------KPE 90

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
            VR+                +ACG  H+ V +++G L +FG    GQ GH    ++L P 
Sbjct: 91  KVRK----------------VACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPK 134

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
              S+  ++++QIA G +H++ +S +G VYV+G N  GQLG G +   ++PK L+     
Sbjct: 135 EIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFK--- 191

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN--- 450
            K    VSCG  H+A++T DG + ++G N+ G+LGL  S   N  + VP    +P +   
Sbjct: 192 -KEVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSN--TTVPQSVAMPADNDE 248

Query: 451 ---IACGWWHTLLLAE 463
              ++CG  HT+ + +
Sbjct: 249 YISVSCGARHTVAITK 264



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 170/374 (45%), Gaps = 60/374 (16%)

Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           VV+ A G  H   VTE+G +Y +G          + D+G  G     S  K    P+   
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFG----------SNDWGQLGLGHTKSLNK----PSFVK 85

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASG----------DEFFTLSPCLVTLNPGVKIT 215
           P   ++  +    R  T    E  +  + G          D+   L P  +   P ++I 
Sbjct: 86  PLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIK 145

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           ++A G  H++ILS+ G V+ WG   EGQLGLG  ++     + +P          + L  
Sbjct: 146 QIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVE-----NSLP----------KKLKF 190

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST---NDQLRP 332
           ++  V+            ++CG  H+A+VT  G L TFG    G+ G  S+   N  +  
Sbjct: 191 KKEVVS------------VSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQ 238

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPI 391
           S A    + +   ++ G  HTV I+ +G  Y +G    GQLG G    E N PK ++   
Sbjct: 239 SVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKK-- 296

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           L  ++   VSCG  H+AV+TE G+V ++G  ++G+LG G+    N    V +  F   N 
Sbjct: 297 LSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNV 356

Query: 451 --IACGWWHTLLLA 462
             ++CG  HTL+LA
Sbjct: 357 VYVSCGGCHTLVLA 370



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 13/109 (11%)

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G V+ FG ++F       D   N   +    ++E      ++CG  HSAV+TE G++  +
Sbjct: 15  GAVFTFGKSKFA------DNIANKFWIKNDGVVE------MACGDEHSAVVTESGRLYVF 62

Query: 420 GWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           G N +GQLGLG +   N PS V P+     R +ACG  HT++ +E+ ++
Sbjct: 63  GSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSESGKL 111


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 154/306 (50%), Gaps = 47/306 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   + P  V    GV+I KVAAG  H+L+LSD G V+ +G G +G LG G + + + 
Sbjct: 149 GDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQL- 207

Query: 255 TPHLIPCLEH-----AASGKDRPLLVRQ-GSVNSSG------------------KAGRSY 290
            P LI  L+       A+G    L+V + G V S G                  K    +
Sbjct: 208 VPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHF 267

Query: 291 VK----EIACGGRHSAVVT------DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
           V+    ++A GG HS V++        G +L+FG   YGQ G G  +  +     +S   
Sbjct: 268 VQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMI-----ASPAQ 322

Query: 341 IQVE----QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESK 395
           +QVE    +I AG  H++ ++ +GRVY FG  Q GQLG G D  +N  P L+++  LE +
Sbjct: 323 VQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQS--LERE 380

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
           R   V+ G   S VL+ +G V S+G  K G+LG GD  +   P++V   G     I+ G+
Sbjct: 381 RIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVFAAGHTVSAISAGY 440

Query: 456 WHTLLL 461
            H+L++
Sbjct: 441 SHSLVV 446



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 134/287 (46%), Gaps = 44/287 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG-----EGQLGLGS- 248
           GD    L P  V      ++  V+AG  H+L+ +  G +  +GYG      +G+LG G  
Sbjct: 92  GDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQ 151

Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
           R +M+P                RP+L   G            + ++A G  HS V++D G
Sbjct: 152 RTQMIP----------------RPVLSLSGV----------RIVKVAAGAHHSLVLSDQG 185

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            + +FG G+ G  GHG    QL P   SSL   +V  IAAG  H++ ++  G VY FG  
Sbjct: 186 NVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLG 245

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT------EDGQVLSWGWN 422
             G LG G      VPK +E  +   + A  V+ G  HS VL+      ++G+VLS+G N
Sbjct: 246 SEGALGHGDTDMSLVPKKIEHFV--QRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQN 303

Query: 423 KYGQLGLGDSIDRNI--PSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
            YGQLGLG    R I  P+ V +       I  G  H+L+L    ++
Sbjct: 304 SYGQLGLG-HFSRMIASPAQVQVEA-AAVEIEAGAHHSLVLTNDGRV 348



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 20/172 (11%)

Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           AG +++FG  L    GHG   D+LRP    +L   +V  ++AGL+H++  + +G +  FG
Sbjct: 77  AGNVVSFG--LADPSGHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFG 134

Query: 367 ---GNQF--GQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARHSAVLTEDGQVLSW 419
               N    G+LG G  + + +P+    P+L     ++  V+ GA HS VL++ G V S+
Sbjct: 135 YGSANVVVDGRLGHGDQRTQMIPR----PVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSF 190

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLLAETTQI 467
           G    G LG GD   + +P L+     L R    +IA G  H+L++AE+  +
Sbjct: 191 GVGIDGSLGHGDQARQLVPKLIS---SLQREKVVDIAAGSAHSLVVAESGDV 239


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 30/259 (11%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V +GG+H L L+  G+V+ WG G +G+LG G+                  S  D+
Sbjct: 2996 IKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGN-----------------CSSLDK 3038

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       S K+ R  ++++ACG  HSA +T +G L T+G G YG+ GHG TN QL+
Sbjct: 3039 PRLIE------SLKSKR--IRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLK 3090

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    SL+  +V Q+A G     T+ ++ +G VY +G   FG+LG G       P L++ 
Sbjct: 3091 PKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDR 3150

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
              L       + CGA+ S  LT+ G+V +WG   Y +LG G+      P+LV  + G   
Sbjct: 3151 --LNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKV 3208

Query: 449  RNIACGWWHTLLLAETTQI 467
             ++A G  H L + +T Q+
Sbjct: 3209 IHVAVGALHCLAVTDTGQV 3227



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 127/259 (49%), Gaps = 30/259 (11%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L LS  G V+ WG G +G+LG G+R+                   DR
Sbjct: 3983 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY-----------------DR 4025

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+ +         G   V ++ACGG HSA +T AG L T+G G YG+ GHG + DQL 
Sbjct: 4026 PKLIEE-------LLGTEIV-DVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT 4077

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L D +V  +A  +G   T+C++ +  V+ +G   +G+LG G      VP  +E+
Sbjct: 4078 PKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIES 4137

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIHGFLP 448
              L       V CG++ S  LT  G + +WG   Y +LG G D   R    +  + G   
Sbjct: 4138 --LAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4195

Query: 449  RNIACGWWHTLLLAETTQI 467
             +IA G  H +  ++  ++
Sbjct: 4196 ISIATGSLHCVACSDKGEV 4214



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 173/420 (41%), Gaps = 66/420 (15%)

Query: 14   MEECKETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFAL 64
            +E  + + VY+WG         L G S  K P+ S   ++L      K V   GG     
Sbjct: 2903 VETPQHSAVYVWGLNDKDQLGGLKG-SKIKLPVYSESLSKL------KPVHIAGGSKTLF 2955

Query: 65   ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEA 122
              S+ GKL   G   + G+  L    +   P+P P  ++  + K A  +G  H +++T+ 
Sbjct: 2956 VVSQEGKLYACGEGTN-GRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQD 3014

Query: 123  GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
            G V++WG  E           G  G     S  K   + + ++      A         T
Sbjct: 3015 GRVFSWGEGE----------DGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAIT 3064

Query: 183  SSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVW 234
            SS         E      GD    L P LV    G ++ +VA G R   T+ L+  G V+
Sbjct: 3065 SSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY 3124

Query: 235  GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
             WG G  G+LG G                  + G   PLLV +  +N  G      V +I
Sbjct: 3125 SWGDGDFGKLGRG-----------------GSDGCYTPLLVDR--LNGLG------VVQI 3159

Query: 295  ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
             CG + S  +T  G + T+G G Y + GHG+ +   +P+    L   +V  +A G  H +
Sbjct: 3160 ECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCL 3219

Query: 355  CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA--VLTE 412
             ++  G+VY +G N  GQ G G       P L+    L+  R   VSCG+ HS   VLT+
Sbjct: 3220 AVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE--LDDARVNRVSCGSSHSIAWVLTD 3277



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 118/246 (47%), Gaps = 30/246 (12%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
           G+H L L++   V+ WG G  G+LG G R      P LI  L                 V
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDR-TWYEEPKLIESL-----------------V 556

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
           + +       +  IACG  +SA ++  G L T+G G YG+ GHG+++D + P+  S+L  
Sbjct: 557 DKN-------ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNG 609

Query: 341 IQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
             +  +A  +G   T+C++  G V+ +G   +G+LG G       PK+++  +L+   AK
Sbjct: 610 HMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDK-LLDINVAK 668

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWH 457
           V  CG + SA LT  G+V +WG  +  +LG G+      P  +  +     + +  G  H
Sbjct: 669 VY-CGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLH 727

Query: 458 TLLLAE 463
            L L E
Sbjct: 728 VLALTE 733



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 114/252 (45%), Gaps = 33/252 (13%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD  +   P L+       IT +A G  ++  LS  G+++ WG G  G+LG G+   +  
Sbjct: 541 GDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDV-- 598

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLT 312
              ++P L  A +G                      +  +ACG     +  VT +G + +
Sbjct: 599 ---MVPTLVSALNGH--------------------MIVYVACGSGDSQTLCVTASGIVFS 635

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G YG+ G G  N    P     L+DI V ++  G   +  ++  G VY +G  +  +
Sbjct: 636 WGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYR 695

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL--GLG 430
           LG G ++    PK +E   L++K+ K +  G+ H   LTED  V  WG N YGQ+   LG
Sbjct: 696 LGHGNEEHVRYPKAIEA--LKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQIDPALG 753

Query: 431 DSIDRNIPSLVP 442
             +    P+L P
Sbjct: 754 TIVSE--PTLCP 763



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 121/252 (48%), Gaps = 29/252 (11%)

Query: 220  GGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
            GG  TL  ++  G+V+  GYG  G+LG+G     V  P L+  ++H        + V++ 
Sbjct: 3936 GGEQTLFAVTADGKVYATGYGAVGRLGIGG-TDSVMMPTLLESIQH--------VFVKKV 3986

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
            +VNS              GG+H   ++  G + ++G G  G+ GHG+     RP     L
Sbjct: 3987 AVNS--------------GGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL 4032

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
            +  ++  +A G  H+  I+  G +Y +G  ++G+LG G  + +  PKL+E   L+  +  
Sbjct: 4033 LGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEA--LQDYKVI 4090

Query: 399  VVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGW 455
             V+CG+  +  L  T+D  V SWG   YG+LG G S    +P  +  + G     + CG 
Sbjct: 4091 DVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGS 4150

Query: 456  WHTLLLAETTQI 467
              ++ L  +  I
Sbjct: 4151 QFSVALTRSGSI 4162



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 46/269 (17%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L+P LV      K+  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 4070 GDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG----- 4124

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G   P+ +          AG   +K + CG + S  +T +G++ T
Sbjct: 4125 ------------GSDGCKVPMKIE-------SLAGLGVIK-VECGSQFSVALTRSGSIYT 4164

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHG+ +   RP   ++L   ++  IA G  H V  S +G V+ +G N  GQ
Sbjct: 4165 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQ 4224

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
            LG G   A   P+L+    L+ K+   V+CG+ H+         L+W   K  Q      
Sbjct: 4225 LGDGTTCALQRPRLVHA--LQGKKITRVACGSAHT---------LAWSTMKATQ------ 4267

Query: 433  IDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
                +P+  P+   L +++     H  L+
Sbjct: 4268 --SRMPATTPMEYDLVKDLPFPVLHNRLV 4294



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P Y+ SL  ++   IA G      +S EG++Y  G    G+LG G D     PK +  P 
Sbjct: 2933 PVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPI--PF 2990

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT+DG+V SWG  + G+LG G+    + P L+  +     
Sbjct: 2991 LSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRI 3050

Query: 449  RNIACGWWHT 458
            R++ACG  H+
Sbjct: 3051 RDVACGSGHS 3060



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 1/153 (0%)

Query: 307  AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            +GA+  +G    GQ G         P    SL  ++  Q+  G      ++ +G+VY  G
Sbjct: 3895 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 3954

Query: 367  GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
                G+LG G   +  +P LLE+      +   V+ G +H   L+ +G V SWG    G+
Sbjct: 3955 YGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4014

Query: 427  LGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            LG G+ +  + P L+  + G    ++ACG  H+
Sbjct: 4015 LGHGNRLSYDRPKLIEELLGTEIVDVACGGHHS 4047



 Score = 45.1 bits (105), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 76/218 (34%), Gaps = 70/218 (32%)

Query: 56   CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
            CG G    L  ++   + +WG  D     Y   G+ G      P+  E+     V+K   
Sbjct: 4094 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPMKIESLAGLGVIKVEC 4148

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G    V++T +G +YTWG                 G + +   G                
Sbjct: 4149 GSQFSVALTRSGSIYTWG----------------KGDYHRLGHG---------------- 4176

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
              + V + RK ++ +                        G KI  +A G  H +  SD G
Sbjct: 4177 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDKG 4212

Query: 232  QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
            +V+ WG   EGQLG G+   +       P L HA  GK
Sbjct: 4213 EVFTWGDNDEGQLGDGTTCALQR-----PRLVHALQGK 4245


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 153/305 (50%), Gaps = 31/305 (10%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD      P  V    GV + ++A G  HT++L+  G+V+ WG G +G+LG
Sbjct: 7   RGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGRLG 66

Query: 246 LGSR-IKMVP--TPHL-------IPCLEH--AASGKDRPLLV----RQGSVNSSGKAGRS 289
            G    K VP  T  L       + C  +  AA   +  L        G +    +AG +
Sbjct: 67  HGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHA 126

Query: 290 Y-----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASS 337
                       V +IACG RH+A+VT +GAL T+G    G  GHG T   Q  P    S
Sbjct: 127 TPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLES 186

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           +   +V QI+A  +HT  ++  G ++ +G  +FG+LG   ++  + P +++  +   K+ 
Sbjct: 187 MAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMV--GKKP 244

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWW 456
           + VSCG  H+AV++EDG++ ++G  ++GQLG  D +++  P+ V  + G     I CGW 
Sbjct: 245 RQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWS 304

Query: 457 HTLLL 461
           H++ L
Sbjct: 305 HSVAL 309



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 157/384 (40%), Gaps = 59/384 (15%)

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           + TWG  +D GQ  L      + P          V + A G  H V +T  GEV+TWG  
Sbjct: 2   VFTWGRGED-GQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWG-- 58

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK----RRKTSSARE 187
                       G  G       G +      Q+      AG+ V++       T++   
Sbjct: 59  -----------RGDDGRLGHGDNGWKYVPRMTQSL-----AGQIVLQVTCGSYHTAAVTG 102

Query: 188 ESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
             +              GDE    +P  V    G  + ++A G RHT I++  G ++ WG
Sbjct: 103 NGDLYTWGGGMYGKLGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWG 162

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
               G  G G        P L   LE  A+ +                     V +I+  
Sbjct: 163 DKENGVAGHGETEGHQYLPRL---LESMAAKR---------------------VAQISAC 198

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           G H+A+VTDAG L T+G G +G+ GH S  +   P+    ++  +  Q++ G +HT  +S
Sbjct: 199 GFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVS 258

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
            +GR+Y FGG + GQLG      +  P  +E   L+      ++CG  HS  LT  G V 
Sbjct: 259 EDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEA--LDGMFVSQITCGWSHSVALTVKGLVY 316

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLV 441
           +WG   +G+LG G+     +P  V
Sbjct: 317 TWGNGDHGKLGHGNGRKVAVPQAV 340



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 151/345 (43%), Gaps = 59/345 (17%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHC 116
           G G  +  +  G++ TWG  DD     L  G +G    P    + A   V++   G  H 
Sbjct: 41  GSGHTVVLTTDGEVFTWGRGDD---GRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHT 97

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGE 174
            +VT  G++YTWG                 G + K   G ++  A P            +
Sbjct: 98  AAVTGNGDLYTWG----------------GGMYGKLGHGDEAGHATPKRVEALVGATVAQ 141

Query: 175 EVVKRRKTSSARE--------ESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRH 223
                R T+            + EN  +G    E     P L+      ++ +++A G H
Sbjct: 142 IACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFH 201

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           T I++D G+++ WG G  G+LG  S  +   +P ++  +     GK +P           
Sbjct: 202 TAIVTDAGELFTWGEGKFGRLGHMSE-RNCHSPTIVDYM----VGK-KP----------- 244

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
                   ++++CGG H+AVV++ G L TFG G +GQ GH    +++ P++  +L  + V
Sbjct: 245 --------RQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFV 296

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            QI  G  H+V ++V+G VY +G    G+LG G  +   VP+ +E
Sbjct: 297 SQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAVE 341



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 87/154 (56%), Gaps = 3/154 (1%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           A+ T+G G  GQ G G T+DQ  P+Y  +L  + V+QIA G  HTV ++ +G V+ +G  
Sbjct: 1   AVFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRG 60

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             G+LG G +  + VP++ ++  L  +    V+CG+ H+A +T +G + +WG   YG+LG
Sbjct: 61  DDGRLGHGDNGWKYVPRMTQS--LAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 429 LGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLL 461
            GD      P  V  + G     IACG  HT ++
Sbjct: 119 HGDEAGHATPKRVEALVGATVAQIACGSRHTAIV 152



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 49/247 (19%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V+ WG G +GQLGLG                   S +D P  V   ++   G      V+
Sbjct: 2   VFTWGRGEDGQLGLGD-----------------TSDQDEPTYVD--ALRGVG------VQ 36

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           +IACG  H+ V+T  G + T+G G  G+ GHG    +  P    SL    V Q+  G +H
Sbjct: 37  QIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYH 96

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           T  ++  G +Y +GG  +G+LG G +     PK +E   L       ++CG+RH+A++T 
Sbjct: 97  TAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVEA--LVGATVAQIACGSRHTAIVTA 154

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI------------ACGWWHTLL 460
            G + +WG  + G  G G++           H +LPR +            ACG +HT +
Sbjct: 155 SGALYTWGDKENGVAGHGET---------EGHQYLPRLLESMAAKRVAQISACG-FHTAI 204

Query: 461 LAETTQI 467
           + +  ++
Sbjct: 205 VTDAGEL 211


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  125 bits (314), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 108/447 (24%), Positives = 194/447 (43%), Gaps = 74/447 (16%)

Query: 28   LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQ-- 83
            LP  + +   +L+P+P  +    + K      CG+      S  G+L TWG+ + +GQ  
Sbjct: 1010 LPVVTVDPDLLLNPMPPLV---KNEKKAVSVACGWEHIAVISSDGELFTWGN-NSQGQLG 1065

Query: 84   SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE--------CVP 135
              L  GK+  TP        + ++  + G  H V+V ++ ++Y+WG             P
Sbjct: 1066 HGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTP 1125

Query: 136  S--AKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------SDKRAGEEVVKRRKTSSAR 186
                K   DF         +TG    +  +++            + G    K R      
Sbjct: 1126 QNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRI 1185

Query: 187  EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
            E SE              +V ++ G +IT +AAG  H+++  D G ++ WG   +GQLG 
Sbjct: 1186 ETSE--------------IVGIH-GERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGH 1230

Query: 247  GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
            G+ I+    P  I  L      K +P++                  +I+CG  H+  +++
Sbjct: 1231 GN-IEKSLRPKQIDEL------KGKPII------------------KISCGHFHTVAISE 1265

Query: 307  AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV------EG 360
              ++  +G G +   G+GS  ++L P      ++ ++E++  GL+HT  ++        G
Sbjct: 1266 LNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRG 1325

Query: 361  RVYVFGGNQFGQLGTGVDQAE---NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
             VY+ GG + G+LGTG D      + P     P L S      S G+  SA++T +G + 
Sbjct: 1326 NVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALY 1385

Query: 418  SWGWNKYGQLGLGDSIDRNIPSLVPIH 444
            +WG+  +GQ+G G + D  +P+ + ++
Sbjct: 1386 TWGYGNFGQIGNGKTEDMWLPTKISLN 1412



 Score =  110 bits (274), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 32/262 (12%)

Query: 213  KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDR 271
            K   VA G  H  ++S  G+++ WG   +GQLG G  + K   TP  +         K  
Sbjct: 1033 KAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETF------KSS 1086

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P+++                  I+CGG HS  V  +  + ++G   YGQ GHG    Q  
Sbjct: 1087 PIIM------------------ISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNL 1128

Query: 332  PSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P         Q V  IA G  HT+ +   G ++ FG N  GQLG G  +   VP  +ET 
Sbjct: 1129 PKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETS 1188

Query: 391  I---LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHG 445
                +  +R   ++ G  HS +  ++G + SWG N  GQLG G+ I++++ P  +  + G
Sbjct: 1189 EIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGN-IEKSLRPKQIDELKG 1247

Query: 446  FLPRNIACGWWHTLLLAETTQI 467
                 I+CG +HT+ ++E   +
Sbjct: 1248 KPIIKISCGHFHTVAISELNSV 1269



 Score = 50.4 bits (119), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 7/91 (7%)

Query: 384  PKLLETP----ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR--NI 437
            P LL  P    +   K+A  V+CG  H AV++ DG++ +WG N  GQLG G ++ +  + 
Sbjct: 1017 PDLLLNPMPPLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQST 1076

Query: 438  PSLVPIHGFLP-RNIACGWWHTLLLAETTQI 467
            P  V      P   I+CG  H++ + ++ QI
Sbjct: 1077 PRRVETFKSSPIIMISCGGEHSVAVDQSFQI 1107


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 167/424 (39%), Gaps = 99/424 (23%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           GG   +LA  + GKL TWG        +    K   TP          +V+AA G  HC+
Sbjct: 45  GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCL 104

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +V + G  Y WG  E          +G  G    KD TG+    P  +     KR  +++
Sbjct: 105 AVDDQGRAYAWGGNE----------YGQCGEEPSKDETGR----PVRRDIVIPKRCAQQL 150

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
             R                                    +VAAGG H+++L+  G VW W
Sbjct: 151 TVR------------------------------------QVAAGGTHSVVLTREGYVWTW 174

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
                GQ      IK +  P  +  LE+                          V+ IA 
Sbjct: 175 -----GQPWPPGDIKQISVPVRVQGLEN--------------------------VRLIAV 203

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G  H+  + + G L  +G   YGQ G G T  +  P     L D+ +  IAAG WH+  +
Sbjct: 204 GAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTAL 263

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + EG VY +G  + G+LG G +   +     +  +L  +    VSCG  HS  LT DG++
Sbjct: 264 TNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRI 323

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVPIH-----------------GFLPRNIACGWWHTL 459
            S+G   +G+LG G  +    P  +PIH                  ++ +++ACG  HTL
Sbjct: 324 FSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTL 383

Query: 460 LLAE 463
            + E
Sbjct: 384 AIVE 387



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 120/292 (41%), Gaps = 86/292 (29%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V  WG G +GQLGLG+  +      ++  LE        P  VR                
Sbjct: 7   VIAWGSGEDGQLGLGTD-EEKELASVVDALE--------PFNVRS--------------- 42

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLW 351
            +  G R+S  + D G L T+GW   G  GH   T  +  PS   SL ++++ Q A G W
Sbjct: 43  -VVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGW 101

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---------VPKL---------------- 386
           H + +  +GR Y +GGN++GQ G    + E          +PK                 
Sbjct: 102 HCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTH 161

Query: 387 ------------------------LETPI----LESKRAKVVSCGARHSAVLTEDGQVLS 418
                                   +  P+    LE+ R  +++ GA H+  L EDG + +
Sbjct: 162 SVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVR--LIAVGAFHNLALKEDGTLWA 219

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAETTQI 467
           WG N+YGQLG GD+  R+ P  +P+ G       +IA G WH+  L    ++
Sbjct: 220 WGNNEYGQLGTGDTQPRSYP--IPVQGLDDLTLVDIAAGGWHSTALTNEGEV 269


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 132/263 (50%), Gaps = 30/263 (11%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPC 261
           P  V+    V I  VA G  HTL +SD GQV GWG    GQ GL +  I+  P P +   
Sbjct: 78  PVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRI--- 134

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           L+H AS +                    +VK + CG  HS  +T  G L ++G   YGQ 
Sbjct: 135 LKHLASYQ--------------------FVK-VCCGSLHSMALTRDGRLFSWGDNTYGQL 173

Query: 322 GHGS--TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           G G+  TN   RP+  +SL  + + ++A G +H+  +++ G V+ +G N  GQLG G  +
Sbjct: 174 GIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKE 233

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP- 438
            +  P LL    + S+  K ++CG  H+A+LT DG V  +G    GQLG G + +   P 
Sbjct: 234 NKAYPTLLRN--MRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPR 291

Query: 439 SLVPIHGFLPRNIACGWWHTLLL 461
            ++ + G     + CG  HTL+L
Sbjct: 292 KVIDLMGSDITQVTCGKHHTLVL 314



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 128/254 (50%), Gaps = 30/254 (11%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKD 270
           V I  VA G  HTL +SD  QV GWG    GQ GL +  I+  P P +   L H AS + 
Sbjct: 427 VVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRI---LRHLASYQ- 482

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS--TND 328
                              +VK + CG  HS  +T  G L ++G   YGQ G G+  TN 
Sbjct: 483 -------------------FVK-VCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNY 522

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             RP+  +SL  + + ++A G +H+  +++ G V+ +G N  GQLG G  + ++ P LL 
Sbjct: 523 TDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLR 582

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFL 447
              + S+  K ++CG  H+A+LT DG V  +G    GQLG G + +   P  ++ + G  
Sbjct: 583 N--MRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSD 640

Query: 448 PRNIACGWWHTLLL 461
              + CG  HTL+L
Sbjct: 641 ITQVTCGKHHTLVL 654



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 141/351 (40%), Gaps = 91/351 (25%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
            LA S+ G+++ WG  +D GQ  L +G     P P  L   AS   VK   G  H +++T
Sbjct: 99  TLAVSDRGQVLGWGR-NDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALT 157

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
             G +++WG                      D+T  Q  + T     +D+          
Sbjct: 158 RDGRLFSWG----------------------DNTYGQLGIGTLVTNYTDR---------- 185

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
                                 P  +T   GV + +VA GG H+  L+  G V+GWG   
Sbjct: 186 ----------------------PTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKND 223

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
            GQLGLG++                   K  P L+R              VK IACG  H
Sbjct: 224 VGQLGLGNK-----------------ENKAYPTLLR--------NMRSQMVKHIACGQDH 258

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS-VE 359
           +A++T  G +  FG G  GQ GHGS  +++ P     LM   + Q+  G  HT+ +   +
Sbjct: 259 TAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSK 318

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL--------ESKRAKVVSC 402
           GR+Y FG    GQLG    ++ + P+ +  P +         S + +VV C
Sbjct: 319 GRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRC 369



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 140/351 (39%), Gaps = 91/351 (25%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
            LA S+  +++ WG  +D GQ  L +G     P P  L   AS   VK   G  H +++T
Sbjct: 439 TLAVSDRVQVLGWGR-NDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALT 497

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
             G +++WG                      D+T  Q  + T     +D+          
Sbjct: 498 RDGRLFSWG----------------------DNTYGQLGIGTLVTNYTDR---------- 525

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
                                 P  +T   GV + +VA GG H+  L+  G V+GWG   
Sbjct: 526 ----------------------PTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKND 563

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
            GQLGLG++                   K  P L+R              VK IACG  H
Sbjct: 564 VGQLGLGNK-----------------ENKSYPTLLR--------NMRSQMVKHIACGQDH 598

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS-VE 359
           +A++T  G +  FG G  GQ GHGS  +++ P     LM   + Q+  G  HT+ +   +
Sbjct: 599 TAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSK 658

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL--------ESKRAKVVSC 402
           GR+Y FG    GQLG    ++ + P+ +  P +         S + +VV C
Sbjct: 659 GRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTAKNSSSKGRVVRC 709



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 116/261 (44%), Gaps = 33/261 (12%)

Query: 234 WGWGYGGEGQLGLG--------SRIKMVPT-----PHLIPC-LEHAASGKDRPLLVRQGS 279
           + WG   EGQLG+G           K V T        I C   H     D   L   G+
Sbjct: 4   FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63

Query: 280 VNSSGKAGRS---------------YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG-- 322
            NS G+ G+                 +K +ACG  H+  V+D G +L +G    GQCG  
Sbjct: 64  -NSKGQLGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLA 122

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            G   ++ RP     L   Q  ++  G  H++ ++ +GR++ +G N +GQLG G      
Sbjct: 123 TGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNY 182

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV- 441
             +  E   L       V+CG  HS  LT  G V  WG N  GQLGLG+  ++  P+L+ 
Sbjct: 183 TDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLR 242

Query: 442 PIHGFLPRNIACGWWHTLLLA 462
            +   + ++IACG  HT +L 
Sbjct: 243 NMRSQMVKHIACGQDHTAMLT 263



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 173/433 (39%), Gaps = 52/433 (12%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV--VKAAAG 112
           VC G    ++A +  G+L +WG  +  GQ  + +     T  P  L +   V  V+ A G
Sbjct: 146 VCCGSL-HSMALTRDGRLFSWGD-NTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACG 203

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
             H  ++T +G V+ WG            D G  G   K++    + L   ++      A
Sbjct: 204 GFHSFALTISGSVFGWG----------KNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIA 253

Query: 173 GEEVVKRRKTSSA------REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
             +      T+        +        G  +  ++P  V    G  IT+V  G  HTL+
Sbjct: 254 CGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLV 313

Query: 227 LS-DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC--LEHAASGKDRPLLVRQGSVNSS 283
           L    G+++ +G G  GQLG     +    P  +P   + H+++ K           NSS
Sbjct: 314 LEGSKGRLYAFGQGIHGQLG-QDEARSCSNPQRVPGPWVPHSSTEK-----------NSS 361

Query: 284 GKAGRSYVKEIACGGRH-----SAVVTDAGALLTF---GWGLYGQC--GHGSTNDQLRPS 333
            K GR  V+ I  GG H     +    D    L F      ++ Q               
Sbjct: 362 SK-GR-VVRCIYAGGHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXX 419

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
               L  + ++ +A G  HT+ +S   +V  +G N  GQ G      EN P+      L 
Sbjct: 420 XXXXLETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLA 479

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI----DRNIPSLVPIHGFLPR 449
           S +   V CG+ HS  LT DG++ SWG N YGQLG+G  +    DR    L  + G    
Sbjct: 480 SYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPT-ELTSLRGVPLV 538

Query: 450 NIACGWWHTLLLA 462
            +ACG +H+  L 
Sbjct: 539 RVACGGFHSFALT 551



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 12/162 (7%)

Query: 310 LLTFGWG--LYGQCGHGSTNDQLRPSYASSLMDI---QVEQIAAGLWHTVCISVEGRVYV 364
           + TF WG  + GQ G G T  Q     A  +  +   +V+ I+ G  HT  +  +G +Y+
Sbjct: 1   MATFCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYM 60

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            G N  GQLG    Q  N  K ++   LE+   K V+CG  H+  +++ GQVL WG N  
Sbjct: 61  CGANSKGQLG----QDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDR 116

Query: 425 GQLGL--GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           GQ GL  GD  ++  P ++  +  +    + CG  H++ L  
Sbjct: 117 GQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTR 158



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 8/109 (7%)

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           + +G +  GQLG G+   +   ++  E   L  +R + +SCG  H+ ++ +DG +   G 
Sbjct: 4   FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGF---LPRNIACGWWHTLLLAETTQI 467
           N  GQLG     DRN    V +      + +++ACG  HTL +++  Q+
Sbjct: 64  NSKGQLGQ----DRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQV 108


>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
          Length = 390

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 166/413 (40%), Gaps = 94/413 (22%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  E G+L TWG        +    K   TP          +V+AA G  HC++V + 
Sbjct: 52  SLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQ 111

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G+ Y WG  E          +G  G                   P  K  G +V++R   
Sbjct: 112 GQAYAWGGNE----------YGQCGE-----------------EPERKEDGSKVLRRDIA 144

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
              R                       P +++ +VAAGG H+++L+  G VW WG     
Sbjct: 145 IPQR---------------------CAPQLRVRQVAAGGTHSVVLTHNGHVWTWG----- 178

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           Q      IK + TP  +  LE+                          V+ IA G  H+ 
Sbjct: 179 QPWPPGDIKQISTPVRVQGLEN--------------------------VQLIAVGAFHNL 212

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            + + G +  +G   YGQ G G T  + +P     L  + +  IAAG WH+  ++ +  V
Sbjct: 213 ALLEEGEVWAWGNNEYGQLGTGDTQPRSQPVPVQGLSGLILADIAAGGWHSTALTTDAEV 272

Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           Y +G  + G+LG G D++   VP+ +   +L  +    VSCG  HS   T DG++ S+G 
Sbjct: 273 YAWGRGEHGRLGFGDDKSSKMVPQKVH--LLAGETIAQVSCGGTHSVARTADGRIFSYGR 330

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRN------------IACGWWHTLLLA 462
             +G+LG G  +    P  VPI    P+N            +ACG  HTL  A
Sbjct: 331 ADHGRLGYGRKVTTGHPMEVPIGIRPPKNAAENSGCWFVKLVACGGRHTLATA 383



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 81/291 (27%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V  WG G +GQLG+G+                    +D+  +    ++ S GK     V 
Sbjct: 7   VLAWGSGEDGQLGVGNM-------------------EDKDWVCSIQALASHGK----RVV 43

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGH-GSTNDQLRPSYASSLMDIQVEQIAAGLW 351
            +  G R+S  + + G L T+GW   G  GH   +  +  P+   +L ++++ Q A G W
Sbjct: 44  SVVAGSRNSLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGW 103

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR--------------- 396
           H + +  +G+ Y +GGN++GQ G   ++ E+  K+L   I   +R               
Sbjct: 104 HCLAVDDQGQAYAWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGT 163

Query: 397 -------------------------------------AKVVSCGARHSAVLTEDGQVLSW 419
                                                 ++++ GA H+  L E+G+V +W
Sbjct: 164 HSVVLTHNGHVWTWGQPWPPGDIKQISTPVRVQGLENVQLIAVGAFHNLALLEEGEVWAW 223

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIH---GFLPRNIACGWWHTLLLAETTQI 467
           G N+YGQLG GD+  R+ P  VP+    G +  +IA G WH+  L    ++
Sbjct: 224 GNNEYGQLGTGDTQPRSQP--VPVQGLSGLILADIAAGGWHSTALTTDAEV 272


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 123/250 (49%), Gaps = 32/250 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  V+ G  HTL L+D GQ++ WG G +GQLGL +  + V  P  I CL           
Sbjct: 86  IVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQ------- 138

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG---HGSTNDQL 330
                            + ++ACG RHS  ++  G + ++G   +GQ G   HGS+    
Sbjct: 139 -----------------IAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST- 180

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P    SL  I   Q++AG  H+  I++ G V+ +G N+FGQLG         P LL++ 
Sbjct: 181 -PQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKS- 238

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPR 449
            L S+R   VSCG  H+A LT++G V ++G   YGQLG   +     P  +  + G +  
Sbjct: 239 -LRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVT 297

Query: 450 NIACGWWHTL 459
            I+CG  HTL
Sbjct: 298 QISCGRQHTL 307



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 112/238 (47%), Gaps = 35/238 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           V+I +VA G RH+  LS  GQV+ WG    GQLGLG     + TP +I  L+        
Sbjct: 137 VQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIP----- 191

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                                +++ GG HS  +T +GA+  FGWG   +GQ G   TND+
Sbjct: 192 -------------------FAQLSAGGAHSFAITLSGAV--FGWGRNKFGQLGLNDTNDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   +V  ++ G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 WFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARHSAVLT-EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG 445
              L       +SCG +H+   T   G++ S+G    GQLG   + +R  P+  P+ G
Sbjct: 291 ---LMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPA--PVKG 343



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 147/350 (42%), Gaps = 59/350 (16%)

Query: 42  IPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           I  R C     K VC  GCG    +   + G + T G  +D GQ  L   K  + PE   
Sbjct: 23  IEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCG-CNDLGQ--LGHEKPRKKPEHVV 79

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
                 +V  + G +H +++ + G++++WG              GS G    ++  +   
Sbjct: 80  ALDAQIIVAVSGGESHTLALNDKGQIFSWG-------------LGSDGQLGLNNFEECVR 126

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-----------TLSPCLVTL 208
           +P      SD +  +     R + +  +  +  + G   F             +P ++  
Sbjct: 127 VPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQS 186

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
             G+   +++AGG H+  ++  G V+GWG    GQLGL                      
Sbjct: 187 LQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDT------------------- 227

Query: 269 KDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            DR  P L++      S ++ R  V  ++CG  H+A +T  G + TFG G YGQ GH ST
Sbjct: 228 NDRWFPALLK------SLRSQR--VIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCIS-VEGRVYVFGGNQFGQLGT 375
           N ++ P     LM   V QI+ G  HT+  +   G++Y FG    GQLGT
Sbjct: 280 NHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGT 329



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 55/226 (24%)

Query: 291 VKEIACGGRHSAVVTDAGALLT-------------------------------------- 312
           V ++ CG +H+  + D G + T                                      
Sbjct: 36  VCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKPRKKPEHVVALDAQIIVAVSGGESH 95

Query: 313 ----------FGWGL--YGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVE 359
                     F WGL   GQ G  +  + +R P     L D+Q+ Q+A G  H+  +S  
Sbjct: 96  TLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKG 155

Query: 360 GRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           G+V+ +G NQFGQLG G+   + + P+++++  L+      +S G  HS  +T  G V  
Sbjct: 156 GQVFSWGQNQFGQLGLGMHGSSISTPQIIQS--LQGIPFAQLSAGGAHSFAITLSGAVFG 213

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           WG NK+GQLGL D+ DR  P+L+  +       ++CG  HT  L +
Sbjct: 214 WGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTK 259



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  ++++   P         +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   ++    P+      L+++    VS G  H+  L + GQ+ SWG    GQL
Sbjct: 61  NDLGQLGH--EKPRKKPE--HVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQL 116

Query: 428 GLGD-----SIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL +      + RNI  L  +       +ACG+ H+  L++  Q+
Sbjct: 117 GLNNFEECVRVPRNIKCLSDVQ---IAQVACGYRHSHALSKGGQV 158


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 127/278 (45%), Gaps = 35/278 (12%)

Query: 200 TLSPCLVT--LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           +  PC V   L P  +I +V  G  HT  L+  G V G+G G +GQLG+G+        H
Sbjct: 30  SFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFGNGVKGQLGIGN-----TDSH 84

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
             P   H  SGK                     V ++A G  HS  +T++G L  FG  L
Sbjct: 85  SNPQRVHLLSGKG--------------------VVKMAAGLEHSLALTESGDLYAFGDNL 124

Query: 318 YGQ--CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
            GQ   GH  T  +  P     L   ++ Q+A G  HT  ++  G +++FG N+ G LG 
Sbjct: 125 SGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRDGALGV 184

Query: 376 GVDQAENVPKLLETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
                E  P +   P     L+ K    + CG +H+  LT  G V  WG N  GQLG GD
Sbjct: 185 AGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTGD 244

Query: 432 SIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           + +R  PSLV  P+  F   ++ACG  HT+ + +   +
Sbjct: 245 TQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDV 282



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 34/268 (12%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP-TPHLIP 260
           +P  V L  G  + K+AAG  H+L L++ G ++ +G    GQLGLG        TP  +P
Sbjct: 86  NPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVP 145

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW---GL 317
            L                        GR+ + ++ACG  H+AV+T +G L  FG    G 
Sbjct: 146 PL------------------------GRAKITQLACGQDHTAVLTSSGELFMFGNNRDGA 181

Query: 318 YGQCGHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G  GH +    +    P   + L    V QI  GL HTV ++  G VY +G N  GQLG
Sbjct: 182 LGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLG 241

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS-I 433
           TG  Q    P L+  P L + +   V+CG +H+  +T+   V  +G +++GQLGLG   +
Sbjct: 242 TGDTQNRYTPSLVCKP-LSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRRGV 300

Query: 434 DRNIPS-LVPIHGFLPRNIACGWWHTLL 460
              +P+ +V + G   +N   G WHT++
Sbjct: 301 IVPVPTRIVRLGGRRVKNCVGGAWHTII 328



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 131/321 (40%), Gaps = 46/321 (14%)

Query: 60  CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           CG+    A +  G ++ +G+   +GQ  + +      P+   L +   VVK AAG  H +
Sbjct: 51  CGYEHTFALTSDGDVLGFGNGV-KGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSL 109

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP------TEQAPPSDKR 171
           ++TE+G++Y +G         ++   G   +F       Q   P      T+ A   D  
Sbjct: 110 ALTESGDLYAFG-------DNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHT 162

Query: 172 A-----GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
           A     GE  +       A   + +   G      +P LVT   G  + ++  G +HT+ 
Sbjct: 163 AVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVA 222

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           L+  G V+ WG  G GQLG G       TP L+ C         +PL   +         
Sbjct: 223 LTAAGGVYCWGENGRGQLGTGDTQNRY-TPSLV-C---------KPLSAFK--------- 262

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQ 345
                  +ACGG+H+  VTD   +  FG   +GQ G G     +  P+    L   +V+ 
Sbjct: 263 ----CIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRRGVIVPVPTRIVRLGGRRVKN 318

Query: 346 IAAGLWHTVCISVEGRVYVFG 366
              G WHT+  +V G  Y+ G
Sbjct: 319 CVGGAWHTIIGTVTGEQYIMG 339



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 2/108 (1%)

Query: 362 VYVFGGNQFGQLGTGV-DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           V+  GGN  GQLG G   Q+  +P  +   +  ++R   V CG  H+  LT DG VL +G
Sbjct: 10  VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFG 69

Query: 421 WNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
               GQLG+G++   + P  V  + G     +A G  H+L L E+  +
Sbjct: 70  NGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTESGDL 117


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 147/281 (52%), Gaps = 38/281 (13%)

Query: 194  SGDEFFTLSPCLVTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
            + D+ F   P +++   G  +T++        H++ L++ G+V+ WG G  G+LG G+  
Sbjct: 3747 NSDDLFV--PTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNE 3804

Query: 251  KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
            +    P  I  L+    G+D                    V ++ACG RHSAVVT  G L
Sbjct: 3805 RQ-RRPKQIEALQ----GED--------------------VVQLACGFRHSAVVTADGKL 3839

Query: 311  LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQ 369
             TFG G  G+ G  ST+++++P   ++L    V Q++ GL HT+ +S++G  V+ FG   
Sbjct: 3840 FTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGD 3899

Query: 370  FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            +G+LG G   A+  P+ +E   L +K  K V CGA+ S VL  DG V ++G  +   +GL
Sbjct: 3900 YGKLGAGSSTAKYYPQKVEQ--LCNKGMKKVCCGAQFSVVLATDGHVYTFGQERL--IGL 3955

Query: 430  GDSI--DRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             DS+  +R+ P +VP + G    +IA G  H L L+ T  I
Sbjct: 3956 PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDI 3996



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 116/235 (49%), Gaps = 36/235 (15%)

Query: 233  VWGWGYGGEGQL-GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
            V+ WG G  GQL G G+ + +   P L PCL                          S  
Sbjct: 3683 VYLWGNGRYGQLAGTGTNLTL---PTLAPCL--------------------------SQT 3713

Query: 292  KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL- 350
            +++ CG   S ++   GA++  G G YG+ G G+++D   P+  S+     V Q+     
Sbjct: 3714 QQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCG 3773

Query: 351  --WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
               H++ ++  G V+ +G   FG+LG G ++ +  PK +E   L+ +    ++CG RHSA
Sbjct: 3774 SDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEA--LQGEDVVQLACGFRHSA 3831

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
            V+T DG++ ++G  + G+LG   + ++  P  V  + G+    ++CG  HTL+L+
Sbjct: 3832 VVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLS 3886



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 7/181 (3%)

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
           G S  + I  G   +  V+  G++   G G YG+ G G +N+Q  P          ++++
Sbjct: 367 GFSDAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKV 426

Query: 347 AAGLW---HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
            +      HT+ I+V+G V+ +G  ++G+LG G    +  PK+++ P+  SK     S G
Sbjct: 427 FSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLF-SKIVVSASAG 485

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            RHSA +T DG++ +WG   +G+LG  DS  RN P+LV  I G     +ACG  HT+ +A
Sbjct: 486 YRHSAAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGV--GQVACGSSHTIAVA 543

Query: 463 E 463
           +
Sbjct: 544 Q 544



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 171/433 (39%), Gaps = 95/433 (21%)

Query: 12   EKMEECKETVVYMWG-----YLPGTSPEKS-PILSPIPARLCGGDSWKDVCGGGCGFALA 65
            E  +E  ++ VY+WG      L GT    + P L+P     C   + + VCG  C F + 
Sbjct: 3673 EDWQEGGKSDVYLWGNGRYGQLAGTGTNLTLPTLAP-----CLSQTQQVVCGQNCSFLIQ 3727

Query: 66   TSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEAS---------VVKAAAGWAH 115
            ++  G ++  G    EGQ     G+ G+   +   +PT  S         +V +     H
Sbjct: 3728 SN--GAVMAVG----EGQY----GRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGH 3777

Query: 116  CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
             +++TE GEV++WG            DFG  G    +   +   +   Q        GE+
Sbjct: 3778 SMALTETGEVFSWG----------DGDFGKLGHGNNERQRRPKQIEALQ--------GED 3819

Query: 176  VVKRRKTSSAREESENPASGDEFF----------------TLSPCLVTLNPGVKITKVAA 219
            VV+       R  +   A G  F                  + P  V    G  + +V+ 
Sbjct: 3820 VVQL--ACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSC 3877

Query: 220  GGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
            G  HTL+LS D   VW +G G  G+LG GS                 ++ K  P  V Q 
Sbjct: 3878 GLNHTLVLSLDGMAVWAFGDGDYGKLGAGS-----------------STAKYYPQKVEQ- 3919

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             + + G      +K++ CG + S V+   G + TFG             ++  P    SL
Sbjct: 3920 -LCNKG------MKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSL 3972

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
              + +E IA G  H + +S  G +Y +G N  GQLG G       P L+    L+ K  K
Sbjct: 3973 EGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLVKEPTLITA--LQGKNIK 4030

Query: 399  VVSCGARHSAVLT 411
             +S G  HS+  T
Sbjct: 4031 QISAGRCHSSAWT 4043



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 35/269 (13%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRI- 250
           GD      P  + L P   I KV +      HTL ++  G+V+ WG G  G+LG G+   
Sbjct: 404 GDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSAT 463

Query: 251 ----KMVPTPHLIPCLEHAASGKDRPLLV---------------RQGSVNSSGKAGRSYV 291
               K+V  P     +  A++G      V               R G  +S  +   + V
Sbjct: 464 QKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLV 523

Query: 292 KEI------ACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
           K+I      ACG  H+ AV  D   + +FG G  G+ GHG TN   RP    +L    + 
Sbjct: 524 KDISGVGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIR 583

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCG 403
           ++ AG   ++ ++  G+V+ +G      LG G  +  ++ P+ +E   L   +   +SCG
Sbjct: 584 KVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSSETTSLRPRFVED--LSITKIIDISCG 639

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
             H   L+ + +V +WG N  GQ G G +
Sbjct: 640 DSHCLALSHENEVYAWGNNTMGQCGQGHT 668



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 45/262 (17%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR------IKMVPTPHLIPCLEHAASGKD 270
           + AG   T  +S  G V   G G  G+LGLG         K+V  PH             
Sbjct: 374 IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPH------------- 420

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                            R+  K  +  G   H+  +T  G + ++G G YG+ GHG++  
Sbjct: 421 -----------------RNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSAT 463

Query: 329 QLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           Q  P      L    V   +AG  H+  ++ +G +Y +G   FG+LG    Q+ N P L+
Sbjct: 464 QKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLV 523

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLV-PIHG 445
           +    +      V+CG+ H+  + +DG+ + S+G    G+LG GD+     P ++  +HG
Sbjct: 524 K----DISGVGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHG 579

Query: 446 FLPRNIACGWWHTLLLAETTQI 467
           F+ R +  G   +L L    Q+
Sbjct: 580 FIIRKVCAGSQSSLALTSAGQV 601



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 121/314 (38%), Gaps = 64/314 (20%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAG 112
           G  G  LA +  G++ +WG  +     Y   G      + +P   +       VV A+AG
Sbjct: 431 GSDGHTLAITVDGEVFSWGDGE-----YGKLGHGNSATQKYPKIVQGPLFSKIVVSASAG 485

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           + H  +VT  GE+YTWG            DFG  G    DS  + +  PT     S    
Sbjct: 486 YRHSAAVTNDGELYTWG----------EGDFGRLG--HSDSQSRNT--PTLVKDISG--V 529

Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
           G+       T +  ++     S           GD      P ++    G  I KV AG 
Sbjct: 530 GQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGS 589

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
           + +L L+  GQV+ WG G    LG GS                + +   RP  V   S+ 
Sbjct: 590 QSSLALTSAGQVFAWGCG--SCLGCGS----------------SETTSLRPRFVEDLSIT 631

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMD 340
                    + +I+CG  H   ++    +  +G    GQCG G T+  + RP     L  
Sbjct: 632 K--------IIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEG 683

Query: 341 IQVEQIAAGLWHTV 354
           + ++QI AG  H++
Sbjct: 684 VSIQQITAGTSHSL 697



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           VYV+G N   QL  G  +   +PKL +        A+ +  G   +  ++ DG V + G 
Sbjct: 340 VYVWGSNSSHQLAEGTLEKILLPKLTQG----FSDAQTIEAGQYCTFSVSTDGSVKACGK 395

Query: 422 NKYGQLGLGDSIDRNIP 438
             YG+LGLGDS ++++P
Sbjct: 396 GSYGRLGLGDSNNQSMP 412


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 164/375 (43%), Gaps = 30/375 (8%)

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           LP E  +V  + G  H +++T +G VY+WGW           D       QK +  +Q  
Sbjct: 46  LPDE-DIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGH--GDLKIINEPQKIAFFEQER 102

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG--DEFFTLSPCLVTLNP------G 211
           L  +    S        V +  T     ES     G   E+      L    P      G
Sbjct: 103 LEVDYI--SCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAG 160

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
             I KV+ GG HT  L+  G+V+ WG G  GQLG+GS     P          +  G  R
Sbjct: 161 ETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPE-------NESLMGASR 213

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P L++  + N         V ++ACG  HSA VT+ G +  +G   YG  G G ++DQ  
Sbjct: 214 PHLLK--AFNGE------KVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQI 265

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P       DI V +++ G WHTV ++  G  Y FG  ++G+LG G  ++   P L++   
Sbjct: 266 PKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKA-- 323

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
           L+ K     +CG  H+  +T DG     G   +G+LGL D     +P+ + +     R  
Sbjct: 324 LKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLADMKALGVPTRLDLGPIPVRQF 383

Query: 452 ACGWWHTLLLAETTQ 466
           + G  H++ L  +++
Sbjct: 384 SAGGAHSVALMHSSR 398



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 137/361 (37%), Gaps = 82/361 (22%)

Query: 58  GGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPT-EA--SVVKAAAG 112
           GGC  A A ++ G L  WG +     G        H   P   P+P  EA  ++VK + G
Sbjct: 111 GGCHSA-AVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCG 169

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
             H  ++T  G VY WG  +       +   G    + KD             P ++   
Sbjct: 170 GTHTAALTSFGRVYVWGRGD-------SGQLGIGSVWMKD-------------PENESLM 209

Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
           G                             P L+    G K+ +VA G  H+  +++ G 
Sbjct: 210 GAS--------------------------RPHLLKAFNGEKVVQVACGAFHSAAVTEQGH 243

Query: 233 VWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           V+ WG    G LG+G S  + +P       LE+     D P+L                 
Sbjct: 244 VYVWGKEDYGMLGVGQSSDQQIPKR-----LEYF---DDIPVL----------------- 278

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
             ++CGG H+ VV  +G    FG G YG+ G G T  + RP    +L    V Q A G  
Sbjct: 279 -RVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGS 337

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           HT+ ++ +G  YV G    G+LG    +A  VP  L+   L     +  S G  HS  L 
Sbjct: 338 HTLFVTSDGTAYVAGRPDHGRLGLADMKALGVPTRLD---LGPIPVRQFSAGGAHSVALM 394

Query: 412 E 412
            
Sbjct: 395 H 395



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 13/146 (8%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P    +L D  +  ++ G  HT+ ++  G VY +G    GQLG G  +  N P+  +   
Sbjct: 40  PQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQ--KIAF 97

Query: 392 LESKRAKV--VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
            E +R +V  +SCG  HSA +T+DG +  WG + +GQLGL    +    SL P+   +P 
Sbjct: 98  FEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESL-PVKCPMPE 156

Query: 450 --------NIACGWWHTLLLAETTQI 467
                    ++CG  HT  L    ++
Sbjct: 157 GEAGETIVKVSCGGTHTAALTSFGRV 182



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 51/113 (45%), Gaps = 21/113 (18%)

Query: 362 VYVFGGNQFGQLGTGVDQ----------AENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           V  FG N  GQLGTG  +          A N P+ +    L  +    VSCG+RH+  LT
Sbjct: 8   VTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGN--LPDEDIVAVSCGSRHTMALT 65

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN------IACGWWHT 458
             G V SWGW   GQLG GD    N P  +    F  +       I+CG  H+
Sbjct: 66  SSGAVYSWGWGSMGQLGHGDLKIINEPQKI---AFFEQERLEVDYISCGGCHS 115



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 98/276 (35%), Gaps = 53/276 (19%)

Query: 18  KETVVYMWGY-------LPG---TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATS 67
           K+  +Y+WG        LP     + E  P+  P+P    G    K  CGG    AL + 
Sbjct: 120 KDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSF 179

Query: 68  ESGKLITWGSADD-------------EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
             G++  WG  D              E +S + + +    P          VV+ A G  
Sbjct: 180 --GRVYVWGRGDSGQLGIGSVWMKDPENESLMGASR----PHLLKAFNGEKVVQVACGAF 233

Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-- 172
           H  +VTE G VY WG            D+G  G  Q         L      P  + +  
Sbjct: 234 HSAAVTEQGHVYVWG----------KEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCG 283

Query: 173 GEEVVKRRKT----SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           G   V   K+    +  R E      GD      P LV    G  + + A GG HTL ++
Sbjct: 284 GWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVT 343

Query: 229 DMGQVWGWGYGGEGQLGLG--------SRIKMVPTP 256
             G  +  G    G+LGL         +R+ + P P
Sbjct: 344 SDGTAYVAGRPDHGRLGLADMKALGVPTRLDLGPIP 379


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 140/279 (50%), Gaps = 35/279 (12%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------AA 266
           KIT VAAG  HTL ++D  +++ +G G EG LG G    +   P  I  LE       A 
Sbjct: 88  KITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDL-NMPTSIESLEDKDVNIIAC 146

Query: 267 SGKDRPLLVRQGSV-----NSSGKAGR-----SY---------VKEIACGGRHSAVVTDA 307
            G     + + G +     NS G+ G      SY         V  +ACG  H+AVVT  
Sbjct: 147 GGYHSAAITKNGELYIWGSNSEGQLGLKNDTISYPTMLDLGKSVISVACGYYHTAVVTAD 206

Query: 308 GALLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
           G L TFG    G+ G G        +P     +   +V ++A G  HTV ++  G+VY F
Sbjct: 207 GKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISG-KVVKVACGGNHTVALTASGQVYTF 265

Query: 366 GGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           G  Q GQLG G    + N+PKL+E   L  ++ K ++CG  H+AV+++ G++ ++G  ++
Sbjct: 266 GSGQNGQLGLGSKIMDSNIPKLVEA--LSKRKIKHIACGESHTAVVSDKGELFTFGDGRH 323

Query: 425 GQLGLGDSIDRNIPSLVPIHG---FLPRNIACGWWHTLL 460
           G+LG GD    N+   V +     F+  +IACG  HT++
Sbjct: 324 GKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIV 362



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 144/287 (50%), Gaps = 39/287 (13%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
           K+T +A G  HT+++++ G+++ +G    GQLG+GS  K    P  +  L+     H A+
Sbjct: 36  KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSN-KTRNKPTTVKALKPEKITHVAA 94

Query: 268 GKDRPLLVR---------QGSVNSSGKAGRS--------------YVKEIACGGRHSAVV 304
           G+   L V          QGS  + G    +               V  IACGG HSA +
Sbjct: 95  GRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAI 154

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI--QVEQIAAGLWHTVCISVEGRV 362
           T  G L  +G    GQ   G  ND +  SY  +++D+   V  +A G +HT  ++ +G++
Sbjct: 155 TKNGELYIWGSNSEGQL--GLKNDTI--SYP-TMLDLGKSVISVACGYYHTAVVTADGKL 209

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           Y FG  + G+LG G  +A  V K      +  K  K V+CG  H+  LT  GQV ++G  
Sbjct: 210 YTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVK-VACGGNHTVALTASGQVYTFGSG 268

Query: 423 KYGQLGLGDSI-DRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           + GQLGLG  I D NIP LV  +     ++IACG  HT ++++  ++
Sbjct: 269 QNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGEL 315



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 37/226 (16%)

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAA 266
           L+ G  +  VA G  HT +++  G+++ +G    G+LGLG      V  P ++  +    
Sbjct: 184 LDLGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGI---- 239

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
                           SGK     V ++ACGG H+  +T +G + TFG G  GQ G GS 
Sbjct: 240 ----------------SGK-----VVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSK 278

Query: 327 -NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
             D   P    +L   +++ IA G  HT  +S +G ++ FG  + G+LG G +   N+ K
Sbjct: 279 IMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFK 338

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            ++   L+      ++CG  H+ V            NK  +L  GD
Sbjct: 339 PVKVQRLKEFIVLHIACGGCHTIV----------ACNKIDKLANGD 374



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 15/166 (9%)

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQ-LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           + + GA+ TFG   +G      TN   +R          +V  IA G  HTV ++  GR+
Sbjct: 8   IPETGAVFTFGKSRFGD---NRTNKFWIRSD--------KVTDIACGDEHTVVVTENGRL 56

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           + FG N++GQLG G ++  N P  ++   L+ ++   V+ G  H+  +T+  ++ S+G  
Sbjct: 57  FTFGNNEWGQLGIGSNKTRNKPTTVKA--LKPEKITHVAAGRFHTLAVTDSNKLYSFGQG 114

Query: 423 KYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLAETTQI 467
             G LG GD  D N+P S+  +       IACG +H+  + +  ++
Sbjct: 115 SEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGEL 160



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 6/82 (7%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
           KDV    CG   + A +++G+L  WGS + EGQ  L   K+     P  L    SV+  A
Sbjct: 139 KDVNIIACGGYHSAAITKNGELYIWGS-NSEGQLGL---KNDTISYPTMLDLGKSVISVA 194

Query: 111 AGWAHCVSVTEAGEVYTWGWRE 132
            G+ H   VT  G++YT+G  E
Sbjct: 195 CGYYHTAVVTADGKLYTFGETE 216


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 134/261 (51%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H + L+  G+V+ WG G +G+LG G+R+ +   P LI  L         
Sbjct: 3115 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL-EKPKLIETLR-------- 3165

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                               +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3166 ----------------TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLK 3209

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++L D +V Q+A G     T+C++ +G V+ +G   FG+LG G  +  ++P  ++ 
Sbjct: 3210 PKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQVDR 3269

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L       + CGA+ S  LT+ G+V +WG   Y +LG G   D+++    PI G   +
Sbjct: 3270 --LNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHG--TDQHVRKPTPIQGLRGK 3325

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + ++ Q+
Sbjct: 3326 KVIHVAVGALHCLAVTDSGQV 3346



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 135/271 (49%), Gaps = 32/271 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            +P LV     V I KVA  +GG+H L LS  G+V+ WG G +G+LG G+R          
Sbjct: 4164 TPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR---------- 4213

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
                      DRP L+   S++  G      V +IACG  HSA +T  G +LT+G G YG
Sbjct: 4214 -------DSYDRPKLIE--SLSGIG------VVDIACGSAHSACITIQGHVLTWGKGRYG 4258

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
            + GHG + DQL+P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G 
Sbjct: 4259 RLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4318

Query: 378  DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
                 VP  +E+  L       V CG++ S  LT  G V +WG   Y +LG G++     
Sbjct: 4319 SDGCKVPMKIES--LAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRR 4376

Query: 438  PSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            P  V  + G    +IA G  H +  ++  ++
Sbjct: 4377 PKKVAALQGKKIISIATGSLHCVACSDAGEV 4407



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 127/260 (48%), Gaps = 34/260 (13%)

Query: 214 ITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKD 270
           I ++AA   GRH L L+  G V+ WG G  G+LG G +  K +PT          A+  D
Sbjct: 609 IVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPT--------RIAALAD 660

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
           R                   V  + CG  +SA +T +G L T+G G YG+ GHG++ D+ 
Sbjct: 661 R------------------QVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKY 702

Query: 331 RPSYASSLMDIQVEQIAAGL--WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            P+  ++L   +V  +A G    H++C++  G  + +G   FG+LG       +VP  ++
Sbjct: 703 VPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVD 762

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
            P   S   KV S G++ S  LT +G V +WG    G+LG G+S    +P +V  + G  
Sbjct: 763 LP-QASCVVKVFS-GSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKK 820

Query: 448 PRNIACGWWHTLLLAETTQI 467
             ++A G  H L L  + ++
Sbjct: 821 IVDLAVGLAHCLALTASGEL 840



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 130/317 (41%), Gaps = 53/317 (16%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEV++WG           R+     K+       G         
Sbjct: 4179 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSA 4238

Query: 157  QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             SA  T Q           V+   K    R        GD    L P LV    G +   
Sbjct: 4239 HSACITIQG---------HVLTWGKGRYGR-----LGHGDSEDQLQPKLVEALLGYRAID 4284

Query: 217  VA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
            +A  +G   TL ++D   VW WG G  G+LG G                  + G   P+ 
Sbjct: 4285 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKVPM- 4326

Query: 275  VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
                 + S    G   V ++ CG + S  +T +G++ T+G G Y + GHG+T+   RP  
Sbjct: 4327 ----KIESLAGLG---VTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKK 4379

Query: 335  ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
             ++L   ++  IA G  H V  S  G V+ +G N  GQLG G   A   P+L+++  L+ 
Sbjct: 4380 VAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLVQS--LQG 4437

Query: 395  KRAKVVSCGARHSAVLT 411
            K    V CG+ H+  L+
Sbjct: 4438 KHIVKVICGSAHTLALS 4454



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 124/265 (46%), Gaps = 36/265 (13%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTP----HLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
            ++GWG+   GQLG   GSRIK  PTP     L+  ++ A   +    +   G + ++G  
Sbjct: 4091 IFGWGHNHRGQLGGLDGSRIKN-PTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4149

Query: 287  G----------------------RSYVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCG 322
                                      +K++A   GG+H   ++  G + ++G G  G+ G
Sbjct: 4150 AGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4209

Query: 323  HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            HG+ +   RP    SL  I V  IA G  H+ CI+++G V  +G  ++G+LG G  + + 
Sbjct: 4210 HGNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQL 4269

Query: 383  VPKLLETPILESKRAKVVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
             PKL+E   L   RA  ++CG+  +  L  T+D  V SWG   YG+LG G S    +P  
Sbjct: 4270 QPKLVEA--LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMK 4327

Query: 441  V-PIHGFLPRNIACGWWHTLLLAET 464
            +  + G     + CG   ++ L  +
Sbjct: 4328 IESLAGLGVTKVECGSQFSVALTRS 4352



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 149/362 (41%), Gaps = 48/362 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWA 114
             GG       S+ GKL   G   + G+  L    +  TP+  P+ ++  V K A  +G  
Sbjct: 3067 AGGSKSLFIVSQDGKLYACGEGTN-GRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGK 3125

Query: 115  HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
            H +++T  G+V++WG  E           G  G   + +  K   + T +       A  
Sbjct: 3126 HAMALTLDGKVFSWGEGE----------DGKLGHGNRLTLEKPKLIETLRTKRIRDIACG 3175

Query: 175  EVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLI 226
                   TSS         E      GD    L P LVT     ++ +VA G R   TL 
Sbjct: 3176 SSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLC 3235

Query: 227  LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
            L++ G V+ WG G  G+LG G   +    PH +          DR        +N  G  
Sbjct: 3236 LTEDGLVFSWGDGDFGKLGRGGS-EGCSIPHQV----------DR--------LNGVG-- 3274

Query: 287  GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
                V +I CG + S  +T AG + T+G G Y + GHG+     +P+    L   +V  +
Sbjct: 3275 ----VMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHV 3330

Query: 347  AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
            A G  H + ++  G+VY +G N  GQ G+G       P L+    L+      V+CG+ H
Sbjct: 3331 AVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLG--LDGIFVNRVACGSSH 3388

Query: 407  SA 408
            S 
Sbjct: 3389 SV 3390



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 134/347 (38%), Gaps = 75/347 (21%)

Query: 32   SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
            +P++ PILS    +       K     G   A+A +  GK+ +WG  +D        GK 
Sbjct: 3103 TPKQVPILSQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3147

Query: 92   G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
            G       E P+         +   A G +H  ++T +GE+YTWG  E          +G
Sbjct: 3148 GHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YG 3197

Query: 145  SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR--KTSSAREESENPASGD-EFFTL 201
              G     +  K   +   Q    D R  +     R  +T    E+    + GD +F  L
Sbjct: 3198 RLGHGDNCTQLKPKLVTALQ----DHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKL 3253

Query: 202  S---------PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
                      P  V    GV + ++  G + +L L+  G+VW WG G   +LG G+   +
Sbjct: 3254 GRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHV 3313

Query: 253  -VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
              PTP                           G  G+  +  +A G  H   VTD+G + 
Sbjct: 3314 RKPTP-------------------------IQGLRGKKVI-HVAVGALHCLAVTDSGQVY 3347

Query: 312  TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
             +G   +GQ G G+T    +PS    L  I V ++A G  H+V  S+
Sbjct: 3348 AWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAWSL 3394



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/336 (22%), Positives = 127/336 (37%), Gaps = 70/336 (20%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT---EASVVKAAA 111
           VC   C + L               D G     S     T + +P      E ++V+ AA
Sbjct: 569 VCAENCVYILT--------------DSGTVLYLSHAISMTEDNYPAQVKGLECTIVQLAA 614

Query: 112 GWA--HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
                H +++  +G+VY+WG          + D G  G    D++ K+  LPT  A  +D
Sbjct: 615 HCEGRHVLALASSGDVYSWG----------SGDGGRLG--HGDTSAKE--LPTRIAALAD 660

Query: 170 KRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVA- 218
           ++          +++     E              G+      P LVT     ++  VA 
Sbjct: 661 RQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVAL 720

Query: 219 -AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
             G  H+L +++ G  + WG G  G+LG                   +  G   P+ V  
Sbjct: 721 GCGDAHSLCVTEAGLAFAWGDGDFGKLG-----------------NESCVGTSVPVQVDL 763

Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
                      S V ++  G + S  +T  G + T+G G  G+ GHG++     P    +
Sbjct: 764 PQA--------SCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQA 815

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           L   ++  +A GL H + ++  G +Y +G N F Q+
Sbjct: 816 LEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQI 851



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 7/156 (4%)

Query: 308  GALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
            GA   FGWG    GQ G    +    P+   +L  ++  QIA G      ++ +G++Y  
Sbjct: 4087 GASTIFGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYAT 4146

Query: 366  GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
            G    G+LG G   +   P L+E+      +   V+ G +H   L+ DG+V SWG  + G
Sbjct: 4147 GYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4206

Query: 426  QLGLG--DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +LG G  DS DR  P L+  + G    +IACG  H+
Sbjct: 4207 KLGHGNRDSYDR--PKLIESLSGIGVVDIACGSAHS 4240



 Score = 45.1 bits (105), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A + SG + TWG  D     +  +  H   P+         ++  A G  HCV+
Sbjct: 4342 GSQFSVALTRSGSVYTWGKGDYHRLGH-GNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4400

Query: 119  VTEAGEVYTWG 129
             ++AGEV+TWG
Sbjct: 4401 CSDAGEVFTWG 4411



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G  F++A +  G + TWG     G+    + +H   P+         +V  A G AHC++
Sbjct: 775 GSQFSVALTREGTVYTWGKGHG-GRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLA 833

Query: 119 VTEAGEVYTWG---WRECVPSAKVTRD 142
           +T +GE+Y WG   +++  P   VTRD
Sbjct: 834 LTASGELYGWGRNDFQQICPEC-VTRD 859



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 43/213 (20%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVK 108
           + V G  CG  ++ A + SG+L TWG          T G+  HG + + + +PT  + +K
Sbjct: 661 RQVTGVFCGSSYSAAITASGELYTWGRG--------TYGRLGHGNSEDKY-VPTLVTALK 711

Query: 109 A--------AAGWAHCVSVTEAGEVYTW--------GWRECV-PSAKVTRDFGSAGSFQK 151
           A          G AH + VTEAG  + W        G   CV  S  V  D   A    K
Sbjct: 712 AHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVK 771

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
             +G Q ++          R G  V    K    R        G+   +  P +V    G
Sbjct: 772 VFSGSQFSVAL-------TREG-TVYTWGKGHGGR-----LGHGNSEHSPVPKMVQALEG 818

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
            KI  +A G  H L L+  G+++GWG     Q+
Sbjct: 819 KKIVDLAVGLAHCLALTASGELYGWGRNDFQQI 851


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 167/424 (39%), Gaps = 99/424 (23%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           GG   +LA  + GKL TWG        +    K   TP          +V+AA G  HC+
Sbjct: 45  GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCL 104

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +V + G  Y WG  E          +G  G    KD TG+    P  +     KR  +++
Sbjct: 105 AVDDQGRAYAWGGNE----------YGQCGEEPSKDETGR----PVRRDIVIPKRCAQQL 150

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
             R                                    +VAAGG H+++L+  G VW W
Sbjct: 151 TVR------------------------------------QVAAGGTHSVVLTREGYVWTW 174

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G     Q      IK +  P  +  LE+                          V+ IA 
Sbjct: 175 G-----QPWPPGDIKQISVPVRVQGLEN--------------------------VRLIAV 203

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G  H+  + + G L  +G   YGQ G G T  +  P     L D+ +  IAAG WH+  +
Sbjct: 204 GAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTAL 263

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + EG VY +G  + G+LG G +   +     +  +L  +    VSCG  HS  LT DG++
Sbjct: 264 TNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRI 323

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVPIH-----------------GFLPRNIACGWWHTL 459
            S+G   +G+LG G  +    P  +PIH                  ++ +++ACG  HTL
Sbjct: 324 FSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTL 383

Query: 460 LLAE 463
            + E
Sbjct: 384 AIVE 387



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 120/292 (41%), Gaps = 86/292 (29%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V  WG G +GQLGLG+  +      ++  LE        P  VR                
Sbjct: 7   VIAWGSGEDGQLGLGTD-EEKELASVVDALE--------PFNVRS--------------- 42

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLW 351
            +  G R+S  + D G L T+GW   G  GH   T  +  PS   SL ++++ Q A G W
Sbjct: 43  -VVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAW 101

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---------VPKL---------------- 386
           H + +  +GR Y +GGN++GQ G    + E          +PK                 
Sbjct: 102 HCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTH 161

Query: 387 ------------------------LETPI----LESKRAKVVSCGARHSAVLTEDGQVLS 418
                                   +  P+    LE+ R  +++ GA H+  L EDG + +
Sbjct: 162 SVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVR--LIAVGAFHNLALKEDGTLWA 219

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAETTQI 467
           WG N+YGQLG GD+  R+ P  +P+ G       +IA G WH+  L    ++
Sbjct: 220 WGNNEYGQLGTGDTQPRSYP--IPVQGLDDLTLVDIAAGGWHSTALTNEGEV 269


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 126/263 (47%), Gaps = 33/263 (12%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           CLV    G ++  VAAG  HT++L   G+V+  GY   GQ G G+  + V     +P   
Sbjct: 256 CLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGYNDNGQCGQGT-TQRVGVLTRVPI-- 312

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG-RHSAVVTDAGALLTFGWGLYGQCG 322
                                  GR  V+  A  G  H+ VV D G +++FG+   GQ G
Sbjct: 313 ---------------------DGGRKAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQLG 351

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            G+T+ +  P     L  I+V Q +   +H+V     G VY FG N FGQLG+G      
Sbjct: 352 QGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRK 411

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
           +P L+E+  L  +R   ++CG  H+ V T +  V S G N YGQLGL  +  +     V 
Sbjct: 412 LPCLVES--LRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLESTESQR--KFVA 467

Query: 443 IHGFLP----RNIACGWWHTLLL 461
           + G L     R++ CG++HT++L
Sbjct: 468 VKGKLDGAQVRHVRCGYYHTIVL 490



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 34/256 (13%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++T+ +    H++I  D G+V+ +G    GQLG G  I        +PCL  +  G+ 
Sbjct: 369 GIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVID-----RKLPCLVESLRGQ- 422

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                               +  +ACG  H+ V T    + + G   YGQ G  ST  Q 
Sbjct: 423 -------------------RITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLESTESQR 463

Query: 331 RPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLE 388
           +       +D  QV  +  G +HT+ ++ E  V+ FG N +GQLG G   Q    P ++E
Sbjct: 464 KFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIE 523

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
               + K    +S G  H+ ++  DG +  +G N +GQLG GD+ +R+ P   P+  FL 
Sbjct: 524 GA--QEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTNERHSP--FPVSTFLG 579

Query: 449 RNI---ACGWWHTLLL 461
           + I   A G++HT++L
Sbjct: 580 KRIAKVAAGFYHTIVL 595



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 158/410 (38%), Gaps = 108/410 (26%)

Query: 17  CKETVVYMWGYLP------GTSPEKSPILSPIPARLCGGDSWKDVCG-GGCGFALATSES 69
           C    VY  GY        GT+ ++  +L+ +P  + GG     V    GC   L   + 
Sbjct: 280 CSTGEVYTAGYNDNGQCGQGTT-QRVGVLTRVP--IDGGRKAVQVHAYNGCEHTLVVLDD 336

Query: 70  GKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHCVSVTEA 122
           G+++++G        Y   G+ G+   + EP P P        V +A+  + H V   + 
Sbjct: 337 GQMMSFG--------YNYRGQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDN 388

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           GEVYT+G            DFG  GS                                  
Sbjct: 389 GEVYTFG----------RNDFGQLGS---------------------------------- 404

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                       GD      PCLV    G +IT +A G  HT++ +    V   G    G
Sbjct: 405 ------------GDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYG 452

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           QLGL S                  +   R  +  +G ++ +       V+ + CG  H+ 
Sbjct: 453 QLGLES------------------TESQRKFVAVKGKLDGA------QVRHVRCGYYHTI 488

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           V+T    +  FG   YGQ G G T  ++  P+      +  V +I+AG +HTV I  +G 
Sbjct: 489 VLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGM 548

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           ++VFG N  GQLGTG     + P  + T +   KR   V+ G  H+ VLT
Sbjct: 549 LFVFGRNHHGQLGTGDTNERHSPFPVSTFL--GKRIAKVAAGFYHTIVLT 596


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 137/279 (49%), Gaps = 30/279 (10%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKI-TKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
           R E      GD      P  V    GV I T V  G  HT  ++  G ++ WG G  G+L
Sbjct: 6   RGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYGKL 65

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G G+                  SG   P  V           G S V +IACG RH+AVV
Sbjct: 66  GHGNE-----------------SGHSTPRRVEA-------LVGLSIV-DIACGSRHTAVV 100

Query: 305 TDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           T  G L T+G    G  GHG T   Q  P     L   +V Q++A  +HT C++ +   +
Sbjct: 101 TSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETF 160

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
            +G  +FG+LG G ++  + P+L+E+ I   K    V+CG  HSAV+T DG++ ++G  +
Sbjct: 161 AWGEGKFGRLGNGTERNCHSPRLIESLI--GKYPCQVACGGFHSAVITRDGKMYTFGGGE 218

Query: 424 YGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLL 461
           +GQLG  D +++  P+LV  + G + + I CGW H++ L
Sbjct: 219 HGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVAL 257



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 28/237 (11%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V+ WG G +GQLG+G                   S +D P  V           G   + 
Sbjct: 1   VFSWGRGEDGQLGIGD-----------------TSDQDEPTYV-------DALRGVGIIT 36

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            + CG  H+A V   G L T+G G+YG+ GHG+ +    P    +L+ + +  IA G  H
Sbjct: 37  HVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRH 96

Query: 353 TVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           T  ++ +G +Y +G  + G  G G  +  +  PKLLE   L  K+   +S    H+A LT
Sbjct: 97  TAVVTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLER--LNGKKVVQLSACGFHTACLT 154

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           +D +  +WG  K+G+LG G   + + P L+  + G  P  +ACG +H+ ++    ++
Sbjct: 155 DDHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKM 211



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 122/304 (40%), Gaps = 89/304 (29%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
           A + +G L TWG     G  Y   G   E+    P   EA    S+V  A G  H   VT
Sbjct: 47  AVASNGDLYTWG-----GGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVT 101

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
             G +YTWG           ++ G AG    D+ G Q                       
Sbjct: 102 SKGCLYTWG----------DKENGVAG--HGDTEGHQ----------------------- 126

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
                                +P L+    G K+ +++A G HT  L+D  + + WG G 
Sbjct: 127 --------------------YTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGK 166

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
            G+LG G+  +   +P LI  L                     GK    Y  ++ACGG H
Sbjct: 167 FGRLGNGTE-RNCHSPRLIESL--------------------IGK----YPCQVACGGFH 201

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           SAV+T  G + TFG G +GQ GH    ++L+P+   +L  + V+QI  G  H+V ++ EG
Sbjct: 202 SAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEG 261

Query: 361 RVYV 364
             ++
Sbjct: 262 EYHL 265



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 102/223 (45%), Gaps = 30/223 (13%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+E    +P  V    G+ I  +A G RHT +++  G ++ WG    G  G G       
Sbjct: 68  GNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGHGDTEGHQY 127

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           TP L+  L                        G+  V+  ACG  H+A +TD      +G
Sbjct: 128 TPKLLERLN-----------------------GKKVVQLSACG-FHTACLTDDHETFAWG 163

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G +G+ G+G+  +   P    SL+     Q+A G +H+  I+ +G++Y FGG + GQLG
Sbjct: 164 EGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLG 223

Query: 375 TGVDQAENVPKLLETPI--LESKRAKVVSCGARHSAVLTEDGQ 415
                A+ V KL  T +  L+    K ++CG  HS  LT +G+
Sbjct: 224 ----HADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEGE 262


>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 176/430 (40%), Gaps = 102/430 (23%)

Query: 53  KDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
           ++VC    G   +LA  E GKL TWG        +    K    P        A +V+AA
Sbjct: 39  QNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAA 98

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF--QKDSTGKQSALPTEQAPPS 168
            G  HC++V + G  Y WG  E          +G  G    +KD TG+            
Sbjct: 99  IGGWHCLAVDDQGRAYAWGGNE----------YGQCGEEPERKDDTGRP----------- 137

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
                   ++R  T   R  S+                     + + +VAAGG H+++L+
Sbjct: 138 --------LRRDITIPQRCASK---------------------LSVRQVAAGGTHSVVLT 168

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
             G VW WG     Q      IK + TP  +  LE                         
Sbjct: 169 REGHVWTWG-----QPWPPGDIKQISTPVRVQGLEK------------------------ 199

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
             V+ IA G  H+  + + G L  +G   YGQ G G T  + +P     L D+ +  IAA
Sbjct: 200 --VRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSDLTLVDIAA 257

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHS 407
           G WH+  ++ +G VY +G  + G+LG G D++   VP+ ++  +L  +    +SCG  HS
Sbjct: 258 GGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQ--LLVEENIVQISCGGTHS 315

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH--------------GFLPRNIAC 453
             LT DG++ S+G   +G+LG G  +    P  VPI+               +  + +AC
Sbjct: 316 VALTRDGRMFSFGRGDHGRLGYGRKVTTGHPMEVPINLPPATNLSGSGAGGHWCSKLVAC 375

Query: 454 GWWHTLLLAE 463
           G  HTL + E
Sbjct: 376 GGRHTLAIVE 385



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 130/345 (37%), Gaps = 98/345 (28%)

Query: 17  CKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF-ALATSESGK 71
           C++  ++ WG+      G  PE       IP+++    + K V     G+  LA  + G+
Sbjct: 55  CEDGKLFTWGWNQRGTLGHPPETK--TENIPSQVKALANAKIVQAAIGGWHCLAVDDQGR 112

Query: 72  LITWGSADDEGQSYLTSGKHGETPE---------------PFPLPTEASVVKAAAGWAHC 116
              WG     G  Y   G+ GE PE               P    ++ SV + AAG  H 
Sbjct: 113 AYAWG-----GNEY---GQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHS 164

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           V +T  G V+TWG  +  P   +                KQ + P        +  G E 
Sbjct: 165 VVLTREGHVWTWG--QPWPPGDI----------------KQISTPV-------RVQGLEK 199

Query: 177 VKRRKTSS---------------AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
           V+     +                  E     +GD      P  V     + +  +AAGG
Sbjct: 200 VRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSDLTLVDIAAGG 259

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
            H+  L+D G V+GWG G  G+LG G     KMVP              +   LLV +  
Sbjct: 260 WHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVP--------------QKVQLLVEENI 305

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
           V            +I+CGG HS  +T  G + +FG G +G+ G+G
Sbjct: 306 V------------QISCGGTHSVALTRDGRMFSFGRGDHGRLGYG 338



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 4/104 (3%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +  +G  + GQLG G +  E    +     L ++    V  G+R+S  + EDG++ +WGW
Sbjct: 8   IISWGSGEDGQLGIGNN--EEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGW 65

Query: 422 NKYGQLGL-GDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           N+ G LG   ++   NIPS V  +        A G WH L + +
Sbjct: 66  NQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDD 109


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 125/249 (50%), Gaps = 28/249 (11%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           + A G  H++ +++ GQ++ WG   +GQLGLG+ + +  TP ++  L             
Sbjct: 115 QAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKAL------------- 161

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSY 334
                      G S V +IACG +H+  +T+ G L  +G    GQ G G     + RP  
Sbjct: 162 -----------GTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKL 210

Query: 335 ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
            + L  I +  IA G +H++ +S  G V+ +G N FGQLG      + VP LL+T  L +
Sbjct: 211 ITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLKT--LRN 268

Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIAC 453
            + K V+CG   S  LT DG V + G   YGQLG G + +  +P  ++ + G +   I+C
Sbjct: 269 AKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILPRQIIELMGSVVTQISC 328

Query: 454 GWWHTLLLA 462
           G  HTL L 
Sbjct: 329 GKRHTLALV 337



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 35/211 (16%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + ++A G +HTL L++ G+++ WG   +GQLGLG  +K+   P LI  L           
Sbjct: 166 VVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIP------- 218

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLR 331
                            +  IACGG HS VV+ +GA+  FGWG   +GQ G    +D+  
Sbjct: 219 -----------------IAFIACGGYHSIVVSKSGAV--FGWGRNTFGQLGMNDISDKYV 259

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P    +L + +V+ +A G   +V ++++G V+  G   +GQLG G +  E +P+     I
Sbjct: 260 PCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILPR----QI 315

Query: 392 LESKRAKV--VSCGARHS-AVLTEDGQVLSW 419
           +E   + V  +SCG RH+ A++   G+V +W
Sbjct: 316 IELMGSVVTQISCGKRHTLALVPSRGKVYAW 346



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 120/267 (44%), Gaps = 38/267 (14%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL---GSRIKMVPTPH 257
           L P  +       + ++A G  HT++++  G+V+  G    GQLG      R++M+P   
Sbjct: 50  LMPRELDFQKATAVEQIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRLQMIP--- 106

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
                     G D  +                  K+ ACG  HS  V + G L  +G   
Sbjct: 107 ----------GLDAFIF-----------------KQAACGASHSVAVNNWGQLFCWGSNA 139

Query: 318 YGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            GQ G G+       P    +L    V QIA G  HT+ ++  G +Y +G N  GQLG G
Sbjct: 140 DGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLG 199

Query: 377 VD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
            D + E  PKL+    L +     ++CG  HS V+++ G V  WG N +GQLG+ D  D+
Sbjct: 200 QDVKIETRPKLITG--LATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISDK 257

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLL 461
            +P L+  +     + +ACG   ++ L
Sbjct: 258 YVPCLLKTLRNAKVKYVACGEEFSVFL 284



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 3/105 (2%)

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           I  +  +Y +G   +G+LG G  + EN+    E    ++   + ++CG  H+ ++T+DG+
Sbjct: 22  IPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDGE 81

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           V S G N  GQLG      R    ++P +  F+ +  ACG  H++
Sbjct: 82  VFSCGNNDSGQLGHEKPTKR--LQMIPGLDAFIFKQAACGASHSV 124



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 93/254 (36%), Gaps = 42/254 (16%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   ++A +  G+L  WGS  D      T      TP        + VV+ A G  H ++
Sbjct: 119 GASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLA 178

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP-PSDKRA--GEE 175
           +T  GE+Y WG          +   G  G  Q      +  L T  A  P    A  G  
Sbjct: 179 LTNNGELYAWG----------SNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYH 228

Query: 176 VVKRRKTSSA----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
            +   K+ +     R         D      PCL+      K+  VA G   ++ L+  G
Sbjct: 229 SIVVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDG 288

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
            V+  G G  GQLG G+      +  ++P          R ++   GSV          V
Sbjct: 289 GVFTCGAGMYGQLGHGAN-----SNEILP----------RQIIELMGSV----------V 323

Query: 292 KEIACGGRHSAVVT 305
            +I+CG RH+  + 
Sbjct: 324 TQISCGKRHTLALV 337


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 120/248 (48%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  ++ G  HTL L+D GQV+ WG G +GQLGL +  + +  P  I  L           
Sbjct: 86  IVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQ------- 138

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                            V ++ACG  HS  ++  G + ++G   YGQ G G T   +  P
Sbjct: 139 -----------------VAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
            +  SL  I   QIAAG  H+  +++ G V+ +G N+FGQLG         P LL+   L
Sbjct: 182 QHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKA--L 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI 451
            S+R   +SCG  H+A LT++G V ++G   YGQLG   +     P  V  + G +   I
Sbjct: 240 RSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 128/271 (47%), Gaps = 32/271 (11%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   + P       G ++  V  G RHT  L + G V+  G    GQLG          
Sbjct: 18  DEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   +           +  ++CG  H+  + D G + ++G 
Sbjct: 68  --------HEKSRKKPEQVVALDA---------QIIVALSCGESHTLALNDKGQVFSWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           G  GQ G  +  + +R P    SL D+QV Q+A G WH++ +S  G ++ +G N++GQLG
Sbjct: 111 GSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLG 170

Query: 375 TGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
            G+  Q+ +VP+ L++  L+      ++ G  HS  LT  G V  WG NK+GQLGL D+ 
Sbjct: 171 LGMTGQSISVPQHLQS--LQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTN 228

Query: 434 DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           DR  P+L+  +       I+CG  HT  L +
Sbjct: 229 DRCFPALLKALRSQRVIYISCGEDHTAALTK 259



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 146/367 (39%), Gaps = 80/367 (21%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCG-----FALATSESGKLITWGSADDEGQSYLTS 88
           ++  ++ P       G   +DV   GCG     F L   E G + T G  +D GQ  L  
Sbjct: 18  DEEIVVEPRKCEFFHGKRVRDV---GCGRRHTAFLL---EDGTVYTCG-CNDLGQ--LGH 68

Query: 89  GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
            K  + PE         +V  + G +H +++ + G+V++WG              GS G 
Sbjct: 69  EKSRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWG-------------LGSDGQ 115

Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-------- 200
              ++  +   +P      SD       V+  + +     S   + G   F+        
Sbjct: 116 LGLNNFEECIRVPRNIKSLSD-------VQVAQVACGYWHSLALSKGGHIFSWGQNRYGQ 168

Query: 201 ----------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
                       P  +    G+   ++AAGG H+  L+  G V+GWG    GQLGL    
Sbjct: 169 LGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLND-- 226

Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGA 309
                           + +  P L+         KA RS  V  I+CG  H+A +T  G 
Sbjct: 227 ---------------TNDRCFPALL---------KALRSQRVIYISCGEDHTAALTKEGG 262

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS-VEGRVYVFGGN 368
           + TFG G YGQ GH STN ++ P     LM   V QIA G  HT+  +   G++  FG  
Sbjct: 263 VFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLG 322

Query: 369 QFGQLGT 375
             GQLGT
Sbjct: 323 GNGQLGT 329



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 14/161 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  ++++   P         +V  +  G  HT  +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    +SCG  H+  L + GQV SWG    GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQL 116

Query: 428 GLGD-----SIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           GL +      + RNI SL  +       +ACG+WH+L L++
Sbjct: 117 GLNNFEECIRVPRNIKSLSDVQ---VAQVACGYWHSLALSK 154



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G   +GQLG G    E V +  +      KR + V CG RH+A L EDG V + G N  G
Sbjct: 5   GNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLG 64

Query: 426 QLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           QLG   S  R  P  +V +   +   ++CG  HTL L +  Q+
Sbjct: 65  QLGHEKS--RKKPEQVVALDAQIIVALSCGESHTLALNDKGQV 105


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 138/274 (50%), Gaps = 37/274 (13%)

Query: 202 SPCLVTLNPGVKITKVAAGG----RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           SPC +    G+ +  VA GG    +H+  +++ GQV+ WG G  GQLG G    +V  P 
Sbjct: 21  SPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLV-LPR 79

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           LI  L+        P++                  E+ACG  H+ VV+ AG +  +GWG 
Sbjct: 80  LIVGLQ------SNPIV------------------EVACGSAHTVVVSKAGLVFAWGWGH 115

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           +GQ G GST++   P   +SL  ++V ++A G  HT  ++  G VY +G    GQLG G 
Sbjct: 116 FGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGD 175

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTE-DGQVLSWGWNKYGQLGLG--DSID 434
           D +++ P  ++   L       ++CG  H+ V++E D  V SWGW++YGQLG G  D   
Sbjct: 176 DASQSRPMYVKK--LHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFG 233

Query: 435 RNIP-SLVPIHGFLPRNIACGWWHTLLLAETTQI 467
            N   S  PI     + IACG  +TL L+    +
Sbjct: 234 GNKNRSPRPIKDL--QQIACGSSYTLALSSRGDV 265



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 118/236 (50%), Gaps = 32/236 (13%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG+  +G LGLG+                 A G   P++  QG +          V  +A
Sbjct: 3   WGFNNDGALGLGTT---------------DAVGSPCPIIALQGLL----------VVSVA 37

Query: 296 CGG----RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           CGG    +HSA VT+ G + T+G G  GQ GHG + + + P     L    + ++A G  
Sbjct: 38  CGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSA 97

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           HTV +S  G V+ +G   FGQLG G     N P  ++   L+  +   V+CG+ H+AV+T
Sbjct: 98  HTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDP--VQVTSLDGVKVCKVACGSAHTAVVT 155

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQ 466
           E G V +WGW   GQLG GD   ++ P  V  +HG     +ACG  HT++++E  +
Sbjct: 156 ESGHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDR 211



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 119/243 (48%), Gaps = 30/243 (12%)

Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
           +S     GD    + P L+       I +VA G  HT+++S  G V+ WG+G  GQLG+G
Sbjct: 63  KSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVG 122

Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
           S       P  +  L+                           V ++ACG  H+AVVT++
Sbjct: 123 ST-HNSNDPVQVTSLDGVK------------------------VCKVACGSAHTAVVTES 157

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS-VEGRVYVFG 366
           G + T+GWG+ GQ GHG    Q RP Y   L  I V  +A GL HTV +S V+  V+ +G
Sbjct: 158 GHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWG 217

Query: 367 GNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
            +++GQLG  G D           PI   K  + ++CG+ ++  L+  G V ++GW K G
Sbjct: 218 WDEYGQLGHGGWDIFGGNKNRSPRPI---KDLQQIACGSSYTLALSSRGDVYAFGWGKDG 274

Query: 426 QLG 428
           QLG
Sbjct: 275 QLG 277



 Score = 44.7 bits (104), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 90/247 (36%), Gaps = 14/247 (5%)

Query: 5   GSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA- 63
           G   EE       ++  VY WG             + +  RL  G     +    CG A 
Sbjct: 39  GGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAH 98

Query: 64  -LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            +  S++G +  WG     GQ  + S  +   P          V K A G AH   VTE+
Sbjct: 99  TVVVSKAGLVFAWGWGH-FGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTES 157

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G VYTWGW              S   + K   G    + T     +      EV +   +
Sbjct: 158 GHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGIY--VSTLACGLAHTVVVSEVDRAVFS 215

Query: 183 SSAREESENPASGDEFF----TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
               E  +    G + F      SP      P   + ++A G  +TL LS  G V+ +G+
Sbjct: 216 WGWDEYGQLGHGGWDIFGGNKNRSP-----RPIKDLQQIACGSSYTLALSSRGDVYAFGW 270

Query: 239 GGEGQLG 245
           G +GQLG
Sbjct: 271 GKDGQLG 277


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 130/259 (50%), Gaps = 30/259 (11%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH + L+  G+V+ WG G +G+LG  SR+     P L+  L         
Sbjct: 2293 VKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMN-CEKPRLLEAL--------- 2342

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                         K  R  +++IACG  HSA VT +G L T+G G YG+ GHG +  QLR
Sbjct: 2343 -------------KTKR--IRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDSTTQLR 2387

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L+  +V Q+A G     T+ ++ EG VY +G   FG+LG G  +  +VP  +E 
Sbjct: 2388 PKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSVPHNVER 2447

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
              L  +    + CGA+ S  LT+ GQV +WG   Y +LG G       P +   + G   
Sbjct: 2448 --LNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKI 2505

Query: 449  RNIACGWWHTLLLAETTQI 467
             ++A G  H L + +T Q+
Sbjct: 2506 IHVAVGALHCLAVTDTGQV 2524



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 138/271 (50%), Gaps = 32/271 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            +P L+     V I KVA  +GG+H L LS  G+V+ WG G +G+LG G+R +        
Sbjct: 3256 TPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQC------- 3308

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
                      DRP ++     +  GK     V +IACGG HSA VT +G L T+G G YG
Sbjct: 3309 ----------DRPRVIE----SLRGKE----VIDIACGGAHSACVTSSGELYTWGKGRYG 3350

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
            + GHG + DQLRP  A +L   +V  +A  +G   T+CIS +  V+ +G   +G+LG G 
Sbjct: 3351 RLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGG 3410

Query: 378  DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRN 436
                 VP+ ++   L S     V CG++ S  LT+ G V +WG   Y +LG G D   R 
Sbjct: 3411 SDGCKVPQKVDA--LSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRR 3468

Query: 437  IPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
               +  + G    +IA G  H +  ++  ++
Sbjct: 3469 PRKVAALQGKKIISIATGSLHCVACSDQGEV 3499



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 169/411 (41%), Gaps = 70/411 (17%)

Query: 19   ETVVYMWGYL-------PGTSPEKSPILSPIPARLCGGDSWKDVC-GGGCGFALATSESG 70
            +T V++WG         P  S  K+P+L+   + L      K VC  GG       +  G
Sbjct: 2205 QTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSL------KVVCCAGGSKSLFVVTAEG 2258

Query: 71   KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTW 128
            K+   G   + G+  L S ++ + P+     ++  V K A  +G  H +++T  G+V++W
Sbjct: 2259 KVYACGEGTN-GRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSW 2317

Query: 129  GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
            G            D G  G   + +  K   L   +     KR  +       +++    
Sbjct: 2318 G----------EGDDGKLGHLSRMNCEKPRLLEALKT----KRIRDIACGSSHSAAVTSS 2363

Query: 189  SE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGW 236
             E              GD    L P LV    G ++ +VA G R   TL L+D G V+ W
Sbjct: 2364 GELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSW 2423

Query: 237  GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
            G G  G+LG G   +    PH +  L                  N  G      V +I C
Sbjct: 2424 GDGDFGKLGRGGS-EGCSVPHNVERL------------------NGQG------VIQIEC 2458

Query: 297  GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G + S  +T AG + T+G G Y + GHG+ +   +P  A  L   ++  +A G  H + +
Sbjct: 2459 GAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAV 2518

Query: 357  SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            +  G+V+ +G N  GQ G G       P L++   LE  R   V+CG+ HS
Sbjct: 2519 TDTGQVFAWGDNDHGQQGDGSTTVNKKPALVQG--LEGVRITRVACGSSHS 2567



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G ++GWG+   GQLG   G+++K VPT      +E   S   RP+               
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVK-VPT-----AIESLTSL--RPI--------------- 3217

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                +I  G +    VT  G L   G+G  G+ G G T+    P+   S+  + ++++A 
Sbjct: 3218 ----QIVGGEQTLFAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAV 3273

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + +SVEG VY +G  + G+LG G     + P+++E+  L  K    ++CG  H
Sbjct: 3274 NSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIES--LRGKEVIDIACGGAH 3331

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA +T  G++ +WG  +YG+LG GDS D+  P +   + G+   ++ACG
Sbjct: 3332 SACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACG 3380



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 114/259 (44%), Gaps = 45/259 (17%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L P +     G ++  VA  +G   TL +SD   VW WG G  G+LG G     
Sbjct: 3355 GDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRG----- 3409

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G   P  V   +++S G      V ++ CG + S  +T +G + T
Sbjct: 3410 ------------GSDGCKVPQKV--DALSSIG------VCKVECGSQFSIALTKSGCVYT 3449

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHGS +   RP   ++L   ++  IA G  H V  S +G VY +G N  GQ
Sbjct: 3450 WGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQ 3509

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
            LG G   A   P+++    L+ K+   V+CG+ H+         ++W  +K    G    
Sbjct: 3510 LGDGTTNAIQRPRIVTA--LQDKKITNVACGSAHT---------VAWSTSKPLHAG---- 3554

Query: 433  IDRNIPSLVPIHGFLPRNI 451
                +P  VP+   L R +
Sbjct: 3555 ---RLPQTVPMEYNLLREV 3570



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   SL  ++  QI  G      ++ +G++Y  G    
Sbjct: 3184 YGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGAS 3243

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G   + + P LLE+      +   V+ G +H+  L+ +G+V SWG  + G+LG G
Sbjct: 3244 GRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHG 3303

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    +IACG  H+
Sbjct: 3304 NRTQCDRPRVIESLRGKEVIDIACGGAHS 3332



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 7/111 (6%)

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
           +++DQL P   S L + +   IA G     T+ ++  G ++ FG   +G+LG G      
Sbjct: 1   NSDDQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCK 60

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQV---LSWGWNKYGQLGLG 430
           +PKL++   L+ + A +  CG + S +LT+ G V   L++ W       +G
Sbjct: 61  LPKLVDK--LQGQHAVIACCGNQFSVILTKTGTVYTCLTFAWTSSAHWSVG 109



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 55   VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
            VC   CG  F++A ++SG + TWG  D     +  S  H   P          ++  A G
Sbjct: 3428 VCKVECGSQFSIALTKSGCVYTWGKGDYHRLGH-GSDDHVRRPRKVAALQGKKIISIATG 3486

Query: 113  WAHCVSVTEAGEVYTWG 129
              HCV+ ++ GEVYTWG
Sbjct: 3487 SLHCVACSDQGEVYTWG 3503


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 134/273 (49%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK G  +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 VISAF--------------------SGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  +HG    ++A G  H L L E +++
Sbjct: 699 RYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----- 265
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L        
Sbjct: 2994 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKV 3053

Query: 266  ---ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 3054 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSH 3113

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 3114 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3173

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3174 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3231

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + ++ Q+
Sbjct: 3232 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3281



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 132/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3050 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3092

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + +A R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3093 PRLIE------ALRAKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3144

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3145 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3204

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3205 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3262

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3263 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3322

Query: 457  HTL 459
            H++
Sbjct: 3323 HSV 3325



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG GSR      ++V 
Sbjct: 4031 APTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVE 4090

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4091 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4150

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4151 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGS 4210

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4211 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4268

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4269 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 145/356 (40%), Gaps = 83/356 (23%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG  E                      G  S  P ++  
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGSRSPCDRPR 4087

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
              +   G EVV     ++    S    +  + +T                 L P LV + 
Sbjct: 4088 VVESLRGIEVVD---VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVL 4144

Query: 210  PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
             G ++  VA  +G   TL L+D   VW WG G  G+LG G                  + 
Sbjct: 4145 QGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSD 4187

Query: 268  GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
            G   P+ +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +
Sbjct: 4188 GCKVPMKIE--SLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4239

Query: 328  DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
               RP     L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+
Sbjct: 4240 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4299

Query: 388  ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
                L+ K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4300 AA--LQGKKVNRVACGSAHT---------LAWSTSKPSSAG-------KLPAQVPM 4337



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 149/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 3001 AGGSKSLFAVTVEGKVYACGEATNGRLGLGLSS--GTVPIPRQITALSSYVVKKVAVHSG 3058

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +A      A
Sbjct: 3059 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIA 3108

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3109 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3168

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3169 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3209

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3210 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3263

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3264 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3321

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3322 SHSVAWT 3328



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 131/269 (48%), Gaps = 36/269 (13%)

Query: 202  SPC--LVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            +PC  L TL P   I     GG  TL  ++  G+++  GYG  G+LG     + V  P L
Sbjct: 3981 TPCEALATLRPVQLI-----GGEQTLFAVTADGKLYATGYGAGGRLG-IGGTESVSAPTL 4034

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + +R+ +VNS              GG+H   ++  G + ++G    
Sbjct: 4035 LESIQH--------VFIRKVAVNS--------------GGKHCLALSSEGEVYSWGEAED 4072

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHGS +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+LG    
Sbjct: 4073 GKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 4132

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + +  PKL+E  +L+  R   V+CG+    +  LT+D  V SWG   YG+LG G S    
Sbjct: 4133 EDQLKPKLVE--VLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4190

Query: 437  IPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            +P  +  + G     + CG   ++ L ++
Sbjct: 4191 VPMKIESLTGLGVVKVECGSQFSVALTKS 4219



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2963 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2996

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G +   G    G+ G G ++  +  P   ++L    V+++A 
Sbjct: 2997 -VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3055

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L+E   L +KR + ++CG+ H
Sbjct: 3056 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LRAKRIRDIACGSSH 3113

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA LT  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3114 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3173

Query: 466  Q 466
            +
Sbjct: 3174 E 3174



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLE------------------------VVKVRCGSQFSVALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPAAL--PGLDTKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4209 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4267

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4268 CTEDGEVYTWG 4278



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G  F++A ++ G++ +WG  D++   + T  +H   P          V+  AAG  HC++
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPRLLEGLHGKKVIDVAAGSTHCLA 724

Query: 119 VTEAGEVYTWG 129
           +TE  EV++WG
Sbjct: 725 LTEDSEVHSWG 735



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 3959 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4018

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      R   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 4019 GRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 4078

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
                 + P +V  + G    ++A G  H+
Sbjct: 4079 SRSPCDRPRVVESLRGIEVVDVAAGGAHS 4107



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 89/237 (37%), Gaps = 54/237 (22%)

Query: 53  KDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGETPEPFPL 100
           K V    CG  ++ A +  G+L TWG          S++DE    L +G  G        
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG-------- 603

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
             +   V   +G A  ++VTE G+V++WG            D+G  G    D       +
Sbjct: 604 -LKVIDVACGSGDAQTLAVTENGQVWSWG----------DGDYGKLGRGGSDGCKTPKLI 652

Query: 161 PTEQAPPSDKRAGEEVVKRRKTSS--------------AREESENPASGDEFFTLSPCLV 206
                   +K    EVVK R  S                + +++    G E     P L+
Sbjct: 653 --------EKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLL 704

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
               G K+  VAAG  H L L++  +V  WG   + Q     R+   P P  +P L+
Sbjct: 705 EGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTK-PEPAALPGLD 760



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 4045 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGSRSPCDRPRVVESLRGIE 4096

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   VT AG++YTWG
Sbjct: 4097 VVDVAAGGAHSACVTAAGDLYTWG 4120


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 122/262 (46%), Gaps = 36/262 (13%)

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           F  L     +++ G + +   AGG          QV+ WG+G  G+LG G  +K V  P 
Sbjct: 57  FSLLHRGATSVHCGAEYSMAVAGGDK--------QVYSWGWGDFGRLGTGD-VKDVFIPC 107

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
            +P L                       AGR  V  +ACG  H+ V T  G L  FG   
Sbjct: 108 PLPAL-----------------------AGRR-VASVACGDTHTLVATAEGQLFAFGRNQ 143

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
            GQCG GS  D L P   ++L   +V  +A G  H++C++ EG VY +G  ++G +G G 
Sbjct: 144 NGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGE 203

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
            Q  ++P L +   LE  +   V+CG RHS  + E G + +WGW  Y QL  GD  D  +
Sbjct: 204 SQDRHLPTLAKG--LEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYV 261

Query: 438 PSLVPIHGFLPRNIACGWWHTL 459
           P  V     +   +A GW HT+
Sbjct: 262 PKRVEAVQQVA-TVAGGWRHTM 282



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 167/397 (42%), Gaps = 60/397 (15%)

Query: 56  CGGGCGFALATSESGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
           CG     AL ++ SG ++ +WG  +D GQ  L  G   +  EP  +    S++   A   
Sbjct: 14  CGSSHSLALISTPSGSMVLSWGRGED-GQ--LGHGDAEDRQEPQAV---FSLLHRGATSV 67

Query: 115 HC---VSVTEAG---EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP------T 162
           HC    S+  AG   +VY+WGW           DFG  G+           LP       
Sbjct: 68  HCGAEYSMAVAGGDKQVYSWGW----------GDFGRLGTGDVKDVFIPCPLPALAGRRV 117

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
                 D        + +  +  R ++     G     L P LVT   G ++  VA G  
Sbjct: 118 ASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAE 177

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
           H++ ++  G+V+ WG+G  G +G G S+ + +PT  L   LE                  
Sbjct: 178 HSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPT--LAKGLEGVK--------------- 220

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
                    V ++ CG RHS  V + GA+ T+GWG Y Q   G   D   P    ++   
Sbjct: 221 ---------VAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEAVQ-- 269

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           QV  +A G  HT+    +GR++  G N+FGQ G G    E+V ++ +   L  +R   V 
Sbjct: 270 QVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVG--HNEDVVRVQQVEALAGERVVQVK 327

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
            G +H+  +T  G+  SWG N  GQLG     D N P
Sbjct: 328 SGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDSNSP 364



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 53/217 (24%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----- 105
           K+V    CG   ++  +  G++  WG        Y   G  GE+ +   LPT A      
Sbjct: 167 KEVVAVACGAEHSMCVTSEGEVYCWGWG-----RYGNIGD-GESQDRH-LPTLAKGLEGV 219

Query: 106 -VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
            V +   GW H ++V E G +YTWGW                G++ +   G +     + 
Sbjct: 220 KVAQVNCGWRHSIAVDEGGAMYTWGW----------------GAYAQLMQGDRK----DH 259

Query: 165 APPSDKRAGEEVVKR----RKTSSAREESENPASGDEFFTLSPCLVTLNPGV-------- 212
             P    A ++V       R T +A  +    ASG   F    C V  N  V        
Sbjct: 260 YVPKRVEAVQQVATVAGGWRHTMAADSQGRLFASGWNKF--GQCGVGHNEDVVRVQQVEA 317

Query: 213 ----KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
               ++ +V +G +HT+ ++  G+ + WG    GQLG
Sbjct: 318 LAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLG 354


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 165/403 (40%), Gaps = 61/403 (15%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKD-VCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
           G   E++P+  P    +  G   K+ VCGG     L     G + T GS +  GQ  L  
Sbjct: 13  GIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLL--HDGSVYTCGS-NSCGQ--LGH 67

Query: 89  GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
            K G TPE         +   + G AH ++V E G+V+ WG              G  G 
Sbjct: 68  NKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGA-------------GEEGQ 114

Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----NPASGD------E 197
               +T     +P       D R  + +   +   +  ++ +        SG       E
Sbjct: 115 LGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGE 174

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
              L P  +    G+ + K+ AGG H+  LS  G V+GWG    GQLGL           
Sbjct: 175 PSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLND--------- 225

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWG 316
                            ++  +V    K  RS  V  I+CG  H+A +T  G L TFG G
Sbjct: 226 -----------------IQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDG 268

Query: 317 LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS-VEGRVYVFGGNQFGQLGT 375
            +GQ GHGST ++L P     LM  +V QI  G  HT+  +   G VY FG N  GQLGT
Sbjct: 269 SWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGT 328

Query: 376 GVDQAENVPKLLETPILESK---RAKVVSCGARHSAVLTEDGQ 415
           GV  A+  P  L+T  L          ++CG  HS +L  + Q
Sbjct: 329 GVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSNDQ 371



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 138/294 (46%), Gaps = 46/294 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-EHAAS---- 267
           KIT V+ G  H+L +++ GQV+ WG G EGQLGLG+    V  P LI  L +H  +    
Sbjct: 84  KITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMC 143

Query: 268 GKDRPL-LVRQGSV-----NSSGKAGRSY------------------VKEIACGGRHSAV 303
           G    + L + G +     N+SG+ G                     + +I  GG HS  
Sbjct: 144 GNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFA 203

Query: 304 VTDAGALLTFGWGLY--GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           ++ +GA+  FGWG    GQ G     D+  P +   L   +V  I+ G  HT  ++ +G 
Sbjct: 204 LSLSGAV--FGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGG 261

Query: 362 VYVFGGNQFGQLGTGVDQAENVPK-LLETPILESKRAKVVSCGARHS-AVLTEDGQVLSW 419
           ++ FG   +GQLG G    E +P+ +LE   L       ++CG  H+ A     G V ++
Sbjct: 262 LFTFGDGSWGQLGHGSTANELLPRRVLE---LMGTEVSQITCGRHHTLAFAPSSGGVYAF 318

Query: 420 GWNKYGQLGLGD-SIDRNIPSLV------PIHGFLPRNIACGWWHTLLLAETTQ 466
           G N +GQLG G  S D++   L        IHG + + I CG  H+ LL    Q
Sbjct: 319 GCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTK-ITCGGDHSFLLYSNDQ 371



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 29/196 (14%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG   +GQLG+G     +  P                        N +   GR  +KEI 
Sbjct: 4   WGKAKDGQLGIGVERNPMFEPR-----------------------NCNVFTGRG-LKEIV 39

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGG+HS  +   G++ T G    GQ GH      + P +  +L   ++  ++ G  H++ 
Sbjct: 40  CGGQHSVFLLHDGSVYTCGSNSCGQLGHNKPG--ITPEFVGALDTQKITLVSCGQAHSLA 97

Query: 356 ISVEGRVYVFGGNQFGQLGTGV-DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
           ++ +G+V+ +G  + GQLG G  + A  +P+L++   L   R   V CG +H   L++DG
Sbjct: 98  VNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKR--LCDHRIAQVMCGNQHCIALSKDG 155

Query: 415 QVLSWGWNKYGQLGLG 430
           Q+ +WG N  GQLGLG
Sbjct: 156 QLFTWGQNTSGQLGLG 171



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 11/163 (6%)

Query: 310 LLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           +L +G    GQ G G   N    P   +      +++I  G  H+V +  +G VY  G N
Sbjct: 1   MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSN 60

Query: 369 QFGQLGTGVDQAENVPKLLETPI--LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
             GQLG       N P +    +  L++++  +VSCG  HS  + E GQV +WG  + GQ
Sbjct: 61  SCGQLG------HNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQ 114

Query: 427 LGLGDS-IDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           LGLG +     IP L+  +       + CG  H + L++  Q+
Sbjct: 115 LGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQL 157


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 166/370 (44%), Gaps = 31/370 (8%)

Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           +V  + G  H +++T +G VY+WGW           D  S    QK +  +Q  L  +  
Sbjct: 55  IVAVSCGSRHTMALTASGAVYSWGWGSMGQLGH--GDLKSINVPQKIAFFEQEGLKVDYV 112

Query: 166 PPSDKRAGEEVVKRRKTSSAREES---------ENPASGDEFFTLSPCLVTLNPGVKITK 216
             S        V    T     E+         E  A+ + F    P L  +     + K
Sbjct: 113 --SCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVAD-ESVVK 169

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           V+ GG HT  L+++G+V+ WG G  GQLG+GS         L    ++   G  RP LV 
Sbjct: 170 VSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAW-------LKDTDDNGLLGVSRPHLVE 222

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                  G  G   V ++ACG  HSA VT+ G +  +G   YG  G G T+DQ  P    
Sbjct: 223 -------GFNGEKVV-QVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVE 274

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
              DI   +++ G WHT+ ++  G  Y FG  ++G+LG G  ++   P L++   L+ + 
Sbjct: 275 FFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKA--LKGQT 332

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWW 456
               +CG  H+  +T DG     G   +G+LG+ D    ++P+ + +     R ++ G  
Sbjct: 333 VIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLDLGPIPVRQVSAGGA 392

Query: 457 HTLLLAETTQ 466
           H++ L  +++
Sbjct: 393 HSMALTHSSR 402



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 126/271 (46%), Gaps = 42/271 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G +I  V+ G RHT+ L+  G V+ WG+G  GQLG G  +K +  P  I   E      D
Sbjct: 52  GEEIVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGD-LKSINVPQKIAFFEQEGLKVD 110

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                                  ++CGG HSA VT+ G L  +G   +GQ G     +  
Sbjct: 111 Y----------------------VSCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAA 148

Query: 331 RPSY------ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV----DQA 380
             S+         + D  V +++ G  HT  ++  GRVYV+G    GQLG G     D  
Sbjct: 149 HESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTD 208

Query: 381 EN------VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
           +N       P L+E      ++   V+CGA HSA +TE G V  WG   YG LG+G + D
Sbjct: 209 DNGLLGVSRPHLVEG--FNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSD 266

Query: 435 RNIPSLVPIHGFLPR-NIACGWWHTLLLAET 464
           +  P  V     +P   ++CG WHT+++A++
Sbjct: 267 QQTPKRVEFFDDIPALRVSCGGWHTMVVAKS 297



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 17/194 (8%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD--IQVEQIAA 348
           +  ++CG RH+  +T +GA+ ++GWG  GQ GHG       P   +      ++V+ ++ 
Sbjct: 55  IVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSC 114

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILE---SKRAKVVSCGA 404
           G  H+  ++ +G +Y++G   +GQLG   + +A +    ++ P+LE    +    VSCG 
Sbjct: 115 GGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGG 174

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLG-----DSIDRNI-----PSLVP-IHGFLPRNIAC 453
            H+A LT  G+V  WG    GQLG+G     D+ D  +     P LV   +G     +AC
Sbjct: 175 THTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVAC 234

Query: 454 GWWHTLLLAETTQI 467
           G +H+  + E   +
Sbjct: 235 GAFHSAAVTEQGHV 248



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 23/179 (12%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYA-------------SSLMDIQVEQIAAGLWHTVC 355
           A++ FG    GQ G G+   + RP+ A               L+  ++  ++ G  HT+ 
Sbjct: 11  AVVAFGCNDDGQLGTGA---KRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMA 67

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++  G VY +G    GQLG G  ++ NVP+ +     E  +   VSCG  HSA +T DG 
Sbjct: 68  LTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGT 127

Query: 416 VLSWGWNKYGQLGL-------GDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           +  WG   +GQLGL        +S     P L  +       ++CG  HT  L    ++
Sbjct: 128 LYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRV 186



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 54/115 (46%), Gaps = 15/115 (13%)

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQ----------AENVPKLLETPILESKRAKVVSCGARH 406
           + E  V  FG N  GQLGTG  +          A N PK L   + E   A  VSCG+RH
Sbjct: 7   ATECAVVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVA--VSCGSRH 64

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI---HGFLPRNIACGWWHT 458
           +  LT  G V SWGW   GQLG GD    N+P  +      G     ++CG  H+
Sbjct: 65  TMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHS 119



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 129/326 (39%), Gaps = 60/326 (18%)

Query: 58  GGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPL---PTEASVVKAAAG 112
           GGC  A  T++ G L  WG       G        H   P   PL     + SVVK + G
Sbjct: 115 GGCHSAAVTND-GTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCG 173

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
             H  ++T  G VY WG  +       +   G   ++ KD T     L   +    +   
Sbjct: 174 GTHTAALTNLGRVYVWGRGD-------SGQLGIGSAWLKD-TDDNGLLGVSRPHLVEGFN 225

Query: 173 GEEVVK----RRKTSSAREESENPASGDEFFTL----------SPCLVTLNPGVKITKVA 218
           GE+VV+       +++  E+      G E + +          +P  V     +   +V+
Sbjct: 226 GEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVS 285

Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
            GG HT++++  G  + +G G  G+LGLG   K    PHL+  L+               
Sbjct: 286 CGGWHTMVVAKSGDCYAFGRGEYGRLGLGD-TKSRTRPHLVKALK--------------- 329

Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
                   G++ + + ACGG H+  VT  G     G   +G+ G       ++P    + 
Sbjct: 330 --------GQTVI-QAACGGSHTLFVTSDGIAYVAGRPDHGRLG----MTDMKPLSVPTR 376

Query: 339 MD---IQVEQIAAGLWHTVCISVEGR 361
           +D   I V Q++AG  H++ ++   R
Sbjct: 377 LDLGPIPVRQVSAGGAHSMALTHSSR 402


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 178/430 (41%), Gaps = 92/430 (21%)

Query: 41  PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP- 99
           P P   C      DV  G    A    E+G + T G  +D GQ  + S    ++    P 
Sbjct: 35  PTPISFCHNVKILDVACGNEQTAFLF-ETGDVFTCG-YNDSGQCGIGSTSRVQSLRLVPA 92

Query: 100 LPTE-ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
           L TE  + +++A G  H  +++ +G +YT+G             F S G     ST    
Sbjct: 93  LVTEDIAHIRSANGCEHLTAISRSGALYTFG-------------FNSRGQLGHGST---- 135

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
                                           NP +       +P  +       + +VA
Sbjct: 136 --------------------------------NPIT-------TPTKIKDLASYHVVEVA 156

Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQ 277
               HT++++  G ++ +G    GQLG+   + + VP P              RP+L   
Sbjct: 157 CSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVP--------LTYFNSRPVLA-- 206

Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-QLRPSYAS 336
                           +ACG  H+ V    G ++ FG   +GQ G G T D    PS  +
Sbjct: 207 ----------------VACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLA 250

Query: 337 SLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           + +D + V  +A G +HT+ ++  G VY FG N +GQLG G     + P L++   L   
Sbjct: 251 APLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKA--LAKT 308

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
            A  V+CG  H+ VL+EDG+V  +G N +GQLGLG+ ID   P ++  +       +A G
Sbjct: 309 HAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFVVKVASG 368

Query: 455 WWHTLLLAET 464
           ++H++ L  T
Sbjct: 369 FYHSICLTAT 378



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 132/297 (44%), Gaps = 34/297 (11%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  ++    VKI  VA G   T  L + G V+  GY   GQ G+GS  + V +  L+P L
Sbjct: 35  PTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQCGIGSTSR-VQSLRLVPAL 93

Query: 263 E-------HAASGKDRPLLV-RQGSV-----NSSGKAGR-----------------SYVK 292
                    +A+G +    + R G++     NS G+ G                   +V 
Sbjct: 94  VTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHGSTNPITTPTKIKDLASYHVV 153

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           E+AC   H+ V+T  G L  FG    GQ G     D+  P   +      V  +A G  H
Sbjct: 154 EVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHH 213

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLT 411
           TV     G V  FG N  GQLGTG     +  P LL  P L+S     ++CG  H+  L 
Sbjct: 214 TVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAP-LDSLVVPSLACGYYHTIALA 272

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           E G V S+G N YGQLG G     + P+L+  +       + CG +HTL+L+E  ++
Sbjct: 273 EHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVLSEDGKV 329



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 9/155 (5%)

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +FG   YG+  H  T D+  P+  S   ++++  +A G   T  +   G V+  G N  G
Sbjct: 15  SFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSG 74

Query: 372 QLGTG----VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           Q G G    V     VP L+   I   + A     G  H   ++  G + ++G+N  GQL
Sbjct: 75  QCGIGSTSRVQSLRLVPALVTEDIAHIRSAN----GCEHLTAISRSGALYTFGFNSRGQL 130

Query: 428 GLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
           G G +     P+ +  +  +    +AC ++HT+++
Sbjct: 131 GHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVM 165


>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
          Length = 256

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 123/235 (52%), Gaps = 28/235 (11%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAAS 267
           +P   +  V+AG  H++ L     +  WG G +GQLG G +  ++VPT  ++   + AA 
Sbjct: 19  DPPPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPT--VLSGFDAAAP 76

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGST 326
           G                      +  + CG  H+ A   D   + ++GWG +G+ GHG++
Sbjct: 77  G----------------------ITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNS 114

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
           +D   P    +L  I+++QIA G  H + +++ G V  +G NQ GQLG G  +   +P+ 
Sbjct: 115 SDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQK 174

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           +++   E    K+++ GA H+A +TEDG +  WGW +YG LGLGD  DR +P  V
Sbjct: 175 IQS--FEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKV 227



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 84/212 (39%), Gaps = 33/212 (15%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA------- 111
           G   ++A      L +WG  +D GQ       HG+  +   +PT  S   AAA       
Sbjct: 30  GASHSVALLAGNVLCSWGRGED-GQL-----GHGDAEDRL-VPTVLSGFDAAAPGITSVI 82

Query: 112 -GWAHCVSVTE-AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTE 163
            G  H  + +E   +VY+WGW           DFG  G       F          +  +
Sbjct: 83  CGADHTTAYSEDEQQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGIKIK 132

Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
           Q    D       +     S  R ++     G    +L P  +    GV +  +AAG  H
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEH 192

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSR-IKMVP 254
           T  +++ G ++GWG+G  G LGLG R  ++VP
Sbjct: 193 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP 224


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 137/261 (52%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H + L+  G+V+ WG G +G+LG G+R+ +                 ++
Sbjct: 2994 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTL-----------------EK 3036

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       S +  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3037 PKLLE------SLRTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLK 3088

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++L   +V Q+A G     T+C++ EG V+ +G   FG+LG G  +  +VP  +E 
Sbjct: 3089 PKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVER 3148

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L       + CGA+ S  LT+ G+V +WG   Y +LG G   D+++    PI G   +
Sbjct: 3149 --LNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHG--TDQHVRKPTPIQGLRGK 3204

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + ++ Q+
Sbjct: 3205 KVIHVAVGALHCLAVTDSGQV 3225



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 133/297 (44%), Gaps = 63/297 (21%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            +P LV     V I KVA  +GG+H L LS  G+V+ WG G +G+LG G+R          
Sbjct: 4019 TPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR---------- 4068

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
                      DRP L+   +++  G      V +IACG  HSA +T  G +LT+G G YG
Sbjct: 4069 -------DSYDRPKLIE--ALSGIG------VVDIACGSAHSACITSQGHVLTWGKGRYG 4113

Query: 320  QCGHGSTNDQLRPSY---------------------------ASSLMDIQ------VEQI 346
            + GHG + DQL+P                             A S M I+      V ++
Sbjct: 4114 RLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKV 4173

Query: 347  AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
              G   +V ++  G VY +G   + +LG G       PK  +   L+ K+   ++ G+ H
Sbjct: 4174 ECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPK--KVAALQGKKIISIATGSLH 4231

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
                ++ G+V +WG N  GQLG G       P LV  + G     + CG  HTL L+
Sbjct: 4232 CVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4288



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 168/356 (47%), Gaps = 45/356 (12%)

Query: 122 AGEVYTWGWRECVPSAK-VTRDFGSAGSFQKDSTGKQSALPTEQAPPS---DKRAGEEVV 177
           A +++T GW  C P     T +  +A +     +  + +  T + PPS    + A  E  
Sbjct: 486 AQKIFTLGWSSCSPEMYGFTSEASNASAQLLAGSVPRYSTATIELPPSLQVRQVACTENS 545

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG--GRHTLILSDMGQVWG 235
               T+S +  S + +  +   T++P LV    GV + ++AA   GRH + LS  G+V+ 
Sbjct: 546 IYIVTTSGQLYSIHSSCAE---TVAPKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYS 602

Query: 236 WGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
           WG G  G+LG G    K VPT               +  L +Q             V  I
Sbjct: 603 WGAGEGGRLGHGDTASKEVPT---------------KIALEKQ-------------VTAI 634

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWH 352
             G  +SA V+  G L T+G G YG+ GHG+++D+  P+   +L   +V  +A  +G  H
Sbjct: 635 YAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAH 694

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           ++ ++  G ++ +G   FG+LG G      +P  +E     S  A++ S G++ S  L+ 
Sbjct: 695 SMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGV---SSVARIYS-GSQFSVALSY 750

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           DG + SWG    G+LG G+S   N+P LV  + G    ++A G  H L L  + ++
Sbjct: 751 DGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGEL 806



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 115/234 (49%), Gaps = 37/234 (15%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            ++GWG+   GQLG   GSRIKM PT    PC    A    RP+                 
Sbjct: 3946 IFGWGHNHRGQLGGLDGSRIKM-PT----PC---EALSLLRPI----------------- 3980

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--A 348
              +IA G +    VT  G L   G+G  G+ G G T+    P+   SL  + ++++A  +
Sbjct: 3981 --QIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNS 4038

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G  H + +S +G V+ +G  + G+LG G   + + PKL+E   L       ++CG+ HSA
Sbjct: 4039 GGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA--LSGIGVVDIACGSAHSA 4096

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
             +T  G VL+WG  +YG+LG GDS D+    L P    L   I CG   T ++A
Sbjct: 4097 CITSQGHVLTWGKGRYGRLGHGDSEDQ----LQPKRCVLRTTIMCGVGVTAIMA 4146



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 145/361 (40%), Gaps = 48/361 (13%)

Query: 58   GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAH 115
            GG       S+ GKL   G   + G+  L    +  TP   P+  +  V K A  +G  H
Sbjct: 2947 GGSKSLFIVSQDGKLYACGEGTN-GRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKH 3005

Query: 116  CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
             +++T  G+V++WG  E           G  G   + +  K   L + +       A   
Sbjct: 3006 AMALTLDGKVFSWGEGED----------GKLGHGNRVTLEKPKLLESLRTKRIRDIACGS 3055

Query: 176  VVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLIL 227
                  TSS         E      GD    L P LVT   G ++ +VA G R   TL L
Sbjct: 3056 SHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCL 3115

Query: 228  SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
            ++ G V+ WG G  G+LG G   +    PH +  L                  N  G   
Sbjct: 3116 TEEGLVFSWGDGDFGKLGRGGS-EGCSVPHQVERL------------------NGVG--- 3153

Query: 288  RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
               V +I CG + S  +T  G + T+G G Y + GHG+     +P+    L   +V  +A
Sbjct: 3154 ---VVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVA 3210

Query: 348  AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
             G  H + ++  G+V+ +G N  GQ G+G       P L+    L+      V+CG+ HS
Sbjct: 3211 VGALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLG--LDGVFVNRVACGSSHS 3268

Query: 408  A 408
             
Sbjct: 3269 V 3269



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+Y+S L  ++   I+ G      +S +G++Y  G    G+LG G     NVP   + PI
Sbjct: 2931 PTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEGTNGRLGLG--HNNNVPTPRQVPI 2988

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT DG+V SWG  + G+LG G+ +    P L+  +     
Sbjct: 2989 LNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRI 3048

Query: 449  RNIACGWWHT 458
            R+IACG  H+
Sbjct: 3049 RDIACGSSHS 3058



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 134/351 (38%), Gaps = 83/351 (23%)

Query: 32   SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
            +P + PIL+    +       K     G   A+A +  GK+ +WG  +D        GK 
Sbjct: 2982 TPRQVPILNQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3026

Query: 92   G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
            G       E P+         +   A G +H  ++T +GE+YTWG  E          +G
Sbjct: 3027 GHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YG 3076

Query: 145  SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV------KRRKTSSAREESENPASGD-E 197
              G     +  K   +   Q        G  VV      +  +T    EE    + GD +
Sbjct: 3077 RLGHGDNCTQLKPKLVTALQ--------GHRVVQVACGSRDAQTLCLTEEGLVFSWGDGD 3128

Query: 198  FFTLS---------PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
            F  L          P  V    GV + ++  G + +L L+ +G+VW WG G   +LG G+
Sbjct: 3129 FGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGT 3188

Query: 249  RIKM-VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
               +  PTP                           G  G+  +  +A G  H   VTD+
Sbjct: 3189 DQHVRKPTP-------------------------IQGLRGKKVI-HVAVGALHCLAVTDS 3222

Query: 308  GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            G +  +G   +GQ G G+T    +P+    L  + V ++A G  H+V  S+
Sbjct: 3223 GQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWSL 3273



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 7/156 (4%)

Query: 308  GALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
            GA   FGWG    GQ G    +    P+   +L  ++  QIA G      ++ +G++Y  
Sbjct: 3942 GASTIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYAT 4001

Query: 366  GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
            G    G+LG G   + + P L+E+      +   V+ G +H   L+ DG+V SWG  + G
Sbjct: 4002 GYGAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4061

Query: 426  QLGLG--DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +LG G  DS DR  P L+  + G    +IACG  H+
Sbjct: 4062 KLGHGNRDSYDR--PKLIEALSGIGVVDIACGSAHS 4095



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 6/106 (5%)

Query: 40  SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           SP+P ++ G  S   +  G   F++A S  G L +WG     G+    + +H   P+   
Sbjct: 723 SPLPVQIEGVSSVARIYSGS-QFSVALSYDGTLYSWGKGHG-GRLGHGNSEHSNVPKLVH 780

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRD 142
                 +V  A G AHC+++T +GE+Y WG   +++  PS  V+RD
Sbjct: 781 ALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQICPSG-VSRD 825



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A + SG + TWG  D     +  +  H   P+         ++  A G  HCV+
Sbjct: 4176 GSQFSVALTRSGSVYTWGKGDYHRLGH-GNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4234

Query: 119  VTEAGEVYTWG 129
             +++GEV+TWG
Sbjct: 4235 CSDSGEVFTWG 4245



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 82/208 (39%), Gaps = 47/208 (22%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVKA------ 109
            G  ++ A S  G+L TWG          T G+  HG + + F +PT+   +KA      
Sbjct: 636 AGASYSAAVSSVGELFTWGRG--------TYGRLGHGNSDDKF-VPTQVQALKAYKVVDV 686

Query: 110 --AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
              +G AH ++VT+ G ++ WG            DFG  G    + +   S LP +    
Sbjct: 687 ALGSGDAHSMAVTDGGLLFAWG----------DGDFGKLG----NGSCNGSPLPVQIEGV 732

Query: 168 SDKRAGEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITK 216
           S   +   +    + S A        S           G+   +  P LV    G KI  
Sbjct: 733 S---SVARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVD 789

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQL 244
           VA G  H L L+  G+++GWG     Q+
Sbjct: 790 VAVGSAHCLALTSSGELYGWGRNDYQQI 817


>gi|414870472|tpg|DAA49029.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 469

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 175/451 (38%), Gaps = 119/451 (26%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  E G+L TWG        +    K   +P P        +V+AA G  HC++V + 
Sbjct: 89  SLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDN 148

Query: 123 GEVYTWGWRECVPSAKVT--RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
           G  Y WG     P+  VT   ++G  G                   P  K  G   ++R 
Sbjct: 149 GHAYAWGRGTRFPAFSVTGGNEYGQCGE-----------------EPERKEDGTRALRRD 191

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
             +  R                       P +K+ +VAAGG H+++L+  G VW WG   
Sbjct: 192 IPTPQR---------------------CAPKLKVRQVAAGGTHSVVLTQEGHVWTWG--- 227

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
             Q      IK + TP  +  LE                           V+ IA G  H
Sbjct: 228 --QPWPPGDIKQISTPVRVQGLEK--------------------------VRVIAVGAFH 259

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           +  +T+ G L  +G   YGQ G G T  +  P     L D+ +  IAAG WH+  ++++G
Sbjct: 260 NLALTEDGILWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQG 319

Query: 361 ------------------------------RVYVFGGNQFGQLGTGVDQAEN-VPKLLET 389
                                         +VY +G  + G+LG G D++   VP  L+ 
Sbjct: 320 EINSLPCYLFRACFKDVQIIKYQKYTYYTMKVYAWGRGEHGRLGFGDDKSSRMVP--LKV 377

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
            +L  +    VSCG  HS  LT DG++ S+G   +G+LG G  +    P  V I    P+
Sbjct: 378 ELLAGEDIVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKLTTGQPMGVDIDLPPPK 437

Query: 450 N------------IACGWWHTLLL---AETT 465
                        +ACG  HTL +   AETT
Sbjct: 438 TRSSRDGQWQAKYVACGGRHTLAIVVWAETT 468



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 130/304 (42%), Gaps = 58/304 (19%)

Query: 187 EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
           E+ +    G+E    + C+  L     +T V AG R++L + + G+++ WG+   G LG 
Sbjct: 53  EDGQLGMGGNEEKDWAHCVEALG-SYAVTAVVAGSRNSLAICEDGRLFTWGWNQRGTLGH 111

Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
             + K   +P  +    HA +G                      + + A GG H   V D
Sbjct: 112 PPKTKTESSPGPV----HALAGLK--------------------IVQAAIGGWHCLAVDD 147

Query: 307 AGALLTFGWGL------------YGQCGHGSTNDQ-----LR---PSYASSLMDIQVEQI 346
            G    +G G             YGQCG      +     LR   P+       ++V Q+
Sbjct: 148 NGHAYAWGRGTRFPAFSVTGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQV 207

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES--KRAKVVSCGA 404
           AAG  H+V ++ EG V+ +          G        K + TP+     ++ +V++ GA
Sbjct: 208 AAGGTHSVVLTQEGHVWTW----------GQPWPPGDIKQISTPVRVQGLEKVRVIAVGA 257

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            H+  LTEDG + +WG N+YGQLG GD+  R+ P  V  +      +IA G WH+  L  
Sbjct: 258 FHNLALTEDGILWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTI 317

Query: 464 TTQI 467
             +I
Sbjct: 318 QGEI 321



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           V   G  + GQLG G ++ ++    +E   L S     V  G+R+S  + EDG++ +WGW
Sbjct: 46  VLYRGSGEDGQLGMGGNEEKDWAHCVEA--LGSYAVTAVVAGSRNSLAICEDGRLFTWGW 103

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLLLAET 464
           N+ G LG      +   S  P+H      I   A G WH L + + 
Sbjct: 104 NQRGTLGHPPKT-KTESSPGPVHALAGLKIVQAAIGGWHCLAVDDN 148


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 129/245 (52%), Gaps = 33/245 (13%)

Query: 202  SPC-LVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            +PC L +LN  V I KVA  +GG+H + L+  G+V+ WG G +G+LG  +R+ +      
Sbjct: 3060 TPCQLTSLNQYV-IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSL------ 3112

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
                       DRP ++       + K+ R  +++IACG  HSA ++  G L T+G G Y
Sbjct: 3113 -----------DRPKMIE------ALKSKR--IRDIACGSSHSAAISSTGELFTWGLGEY 3153

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTG 376
            G+ GHG    QLRP    +L+   + Q+A G     T+ +S EG V+ +G   FG+LG G
Sbjct: 3154 GRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRG 3213

Query: 377  VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
              +  ++P  +E   L      ++ CGA+ S  LT+ GQV +WG   Y +LG G      
Sbjct: 3214 GSEGCDIPHNIER--LNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVR 3271

Query: 437  IPSLV 441
             P+LV
Sbjct: 3272 KPTLV 3276



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 130/262 (49%), Gaps = 32/262 (12%)

Query: 201  LSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            L+P L+     + I KVA  +GG+H L LS  G+V+ WG G +G+LG G++         
Sbjct: 4042 LTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNK--------- 4092

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
                    +G D P L+           G+  V +IACGG HSA VT  G + T+G G Y
Sbjct: 4093 --------NGCDHPQLI-------DALQGKEIV-DIACGGAHSAAVTAGGEIYTWGKGRY 4136

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            G+ GHG + DQ++P    +L+  +V  IA  +G   T+CI+ +  V+ +G   +G+LG G
Sbjct: 4137 GRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4196

Query: 377  VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDR 435
                  +P  +E+  L       V CG++ S  LT  G V +WG   Y +LG G D   R
Sbjct: 4197 GSDGCKIPMKIES--LAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVR 4254

Query: 436  NIPSLVPIHGFLPRNIACGWWH 457
            +   +  + G     IA G  H
Sbjct: 4255 HPKKIAALQGKKIICIATGSLH 4276



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 32/262 (12%)

Query: 211 GVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           G +I+K+AA   G+H+L LS  G V+ WG G  G+LG G                   + 
Sbjct: 518 GKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDN-----------------NS 560

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
           +D+P  + +         G++ +  I+CG  +SA VT +G + T+G G YG+ GHG++ D
Sbjct: 561 RDQPTKITE-------LVGKNVI-HISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSED 612

Query: 329 QLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
              P+    L D  +  IA  +G   T+ ++  G V+ +G   +G+LGTG       PKL
Sbjct: 613 HTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKL 672

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHG 445
           +E   L+      V CG++ S  LT+ G V +WG     +LG G       P LV  ++G
Sbjct: 673 IEK--LQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNG 730

Query: 446 FLPRNIACGWWHTLLLAETTQI 467
              + +A G  H L L +  ++
Sbjct: 731 KCIKKVAVGSGHVLALTDDGEV 752



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 97/215 (45%), Gaps = 29/215 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L P LV    G  I +VA G R   TL LS  G V+ WG G  G+LG G     
Sbjct: 3159 GDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRG----- 3213

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G D P  + +  +N  G      V  I CG + S  +T  G + T
Sbjct: 3214 ------------GSEGCDIPHNIER--LNGLG------VCMIECGAQFSLALTKFGQVYT 3253

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHGS     +P+   SL + ++  +A G  H +C + +G+VY +G N  GQ
Sbjct: 3254 WGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQ 3313

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
             G G       P L+    LE  R   V+CG+ HS
Sbjct: 3314 QGNGTILVNRKPSLVLN--LEGVRVNRVACGSSHS 3346



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 136/336 (40%), Gaps = 76/336 (22%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  G+VY+WG            D G  G   K+       +      
Sbjct: 4058 VAVNSGGKHCLALSTDGKVYSWG----------EGDDGKLGHGNKNGCDHPQLI------ 4101

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
              D   G+E+V     +     S    +G E +T                 + P LV   
Sbjct: 4102 --DALQGKEIVD---IACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETL 4156

Query: 210  PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
             G K+  +A  +G   TL ++D   VW WG G  G+LG G                  + 
Sbjct: 4157 IGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-----------------GSD 4199

Query: 268  GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
            G   P+ +          AG   VK + CG + S  +T +G++ T+G G Y + GHGS  
Sbjct: 4200 GCKIPMKIE-------SLAGLGVVK-VECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDE 4251

Query: 328  DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
                P   ++L   ++  IA G  H V  S  G V+ +G N  GQLG G   A + P+L+
Sbjct: 4252 HVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLV 4311

Query: 388  ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
             T  L+ K    V+CG+ HS         L+W  NK
Sbjct: 4312 VT--LQGKNINRVACGSAHS---------LAWSTNK 4336



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G ++GWG+   GQLG   G ++K+  +   +  L        RP+               
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSAL--------RPV--------------- 4004

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                ++  G +    VT  G +   G+G  G+ G G T+  L P+   S+  I ++++A 
Sbjct: 4005 ----QLVGGEQTLLAVTSDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAV 4060

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + +S +G+VY +G    G+LG G     + P+L++   L+ K    ++CG  H
Sbjct: 4061 NSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDA--LQGKEIVDIACGGAH 4118

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA +T  G++ +WG  +YG+LG GDS D+  P LV  + GF   +IACG
Sbjct: 4119 SAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACG 4167



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 30/263 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD      P  +T   G  +  ++ G  ++  ++  G+V+ WG G  G+LG G+      
Sbjct: 556 GDNNSRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGT-----S 610

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLT 312
             H +P L      KD                   ++ +IACG     +  VT+ G + +
Sbjct: 611 EDHTVPTL--VVGLKDY------------------FIVDIACGSGDAQTLAVTNTGLVFS 650

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G YG+ G G ++    P     L DI+V ++  G   ++ ++  G VY +G     +
Sbjct: 651 WGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHR 710

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G +     PKL+E   L  K  K V+ G+ H   LT+DG+V  WG N  GQ+G    
Sbjct: 711 LGHGSENHVRFPKLVEG--LNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSE 768

Query: 433 IDRNIPSLVP-IHGFLPRNIACG 454
            + + P+L+  + G    +I CG
Sbjct: 769 TNVSEPTLLTLLQGKNIVDIDCG 791



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 4/180 (2%)

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
            VK ++    HS + +D+   + F WGL    Q G    +    P Y+ SL  ++   IA 
Sbjct: 2967 VKTLSETSSHSKLWSDSPTKV-FVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAG 3025

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G      +S +G++Y  G    G+LG G       P  L +      +   V  G +H+ 
Sbjct: 3026 GSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAM 3085

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
             LT DG+V SWG  + G+LG  + +  + P ++  +     R+IACG  H+  ++ T ++
Sbjct: 3086 ALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGEL 3145



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 11/81 (13%)

Query: 55   VCGGGCG--FALATSESGKLITWGSADDEGQSYLT----SGKHGETPEPFPLPTEASVVK 108
            VC   CG  F+LA ++ G++ TWG  D     Y      S +H   P      +E  +V 
Sbjct: 3232 VCMIECGAQFSLALTKFGQVYTWGKGD-----YFRLGHGSDQHVRKPTLVESLSEKKIVH 3286

Query: 109  AAAGWAHCVSVTEAGEVYTWG 129
             A G  HC+  T+ G+VY WG
Sbjct: 3287 VAVGALHCLCATDQGQVYAWG 3307



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A + SG + TWG  D     +  S +H   P+         ++  A G  HCV+
Sbjct: 4221 GSQFSVALTRSGSVYTWGKGDYHRLGH-GSDEHVRHPKKIAALQGKKIICIATGSLHCVA 4279

Query: 119  VTEAGEVYTWG 129
             ++ GEV+TWG
Sbjct: 4280 CSDLGEVFTWG 4290



 Score = 42.0 bits (97), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G  F+LA ++SG + TWG  D+    +  S  H   P+         + K A G  H ++
Sbjct: 687 GSQFSLALTKSGSVYTWGKGDNHRLGH-GSENHVRFPKLVEGLNGKCIKKVAVGSGHVLA 745

Query: 119 VTEAGEVYTWG 129
           +T+ GEVY WG
Sbjct: 746 LTDDGEVYGWG 756



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAA 111
            K     G    LA S  GK+ +WG  DD    +    K+G + P+         +V  A 
Sbjct: 4057 KVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGH--GNKNGCDHPQLIDALQGKEIVDIAC 4114

Query: 112  GWAHCVSVTEAGEVYTWG 129
            G AH  +VT  GE+YTWG
Sbjct: 4115 GGAHSAAVTAGGEIYTWG 4132


>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 167/418 (39%), Gaps = 94/418 (22%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  + G L TWG        +    K   +P          +V+AA G  HC++V + 
Sbjct: 53  SLAICDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDK 112

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G  Y WG  E          +G  G                   P  K  G   ++R   
Sbjct: 113 GRAYAWGGNE----------YGQCGE-----------------EPERKEDGTRALRRDIP 145

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
              R                 C + L    K+ +VAAGG H+++L+  G VW WG     
Sbjct: 146 IPQR-----------------CALKL----KVRQVAAGGTHSVVLTQEGHVWTWG----- 179

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           Q      IK + TP  +  LE                           V  IA G  H+ 
Sbjct: 180 QPWPPGDIKNISTPVRVQGLEQ--------------------------VSMIAVGAFHNL 213

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            ++    L  +G   YGQ G G T  + +P     L ++ +  IAAG WH+  ++ EG V
Sbjct: 214 ALSVDRILWAWGNNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEV 273

Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           Y +G  + G+LG G D++ + VP  L+  +L  +    VSCG  HS VLT DG++ S+G 
Sbjct: 274 YAWGRGEHGRLGFGDDKSSHMVP--LQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYGR 331

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRN------------IACGWWHTLLLAETTQI 467
             +G+LG G  +    P  VPI+   P+             +ACG  HTL +   T +
Sbjct: 332 GDHGRLGDGRKVTTGHPMEVPINLPPPKTSTSSEGLWQANYVACGGRHTLAIVTWTDM 389



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 122/290 (42%), Gaps = 81/290 (27%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-V 291
           V  WG G +GQLG+G             C E     KDR   +          A  +Y V
Sbjct: 10  VLAWGSGEDGQLGMGG------------CDE-----KDRARCI---------CALDAYAV 43

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGL 350
             +  G R+S  + D G+L T+GW   G  GH   T  +  P++  +L+ +++ Q A G 
Sbjct: 44  SAVVAGSRNSLAICDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGG 103

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR------AKVVSCGA 404
           WH + +  +GR Y +GGN++GQ G   ++ E+  + L   I   +R       + V+ G 
Sbjct: 104 WHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGG 163

Query: 405 RHSAVLTEDGQVLSWG--W----------------------------------------- 421
            HS VLT++G V +WG  W                                         
Sbjct: 164 THSVVLTQEGHVWTWGQPWPPGDIKNISTPVRVQGLEQVSMIAVGAFHNLALSVDRILWA 223

Query: 422 ---NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
              N+YGQLG+GD+  R+ P  V  +      +IA G WH+  L +  ++
Sbjct: 224 WGNNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEV 273



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 135/368 (36%), Gaps = 69/368 (18%)

Query: 17  CKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
           C +  ++ WG+      G  PE     SP       G        GG    LA  + G+ 
Sbjct: 57  CDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGW-HCLAVDDKGRA 115

Query: 73  ITWGSADDEGQSYLTSGKHGETPE-----------PFPLPTEAS----VVKAAAGWAHCV 117
             WG     G  Y   G+ GE PE             P+P   +    V + AAG  H V
Sbjct: 116 YAWG-----GNEY---GQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSV 167

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV- 176
            +T+ G V+TWG  +  P   +           K+ +        EQ       A   + 
Sbjct: 168 VLTQEGHVWTWG--QPWPPGDI-----------KNISTPVRVQGLEQVSMIAVGAFHNLA 214

Query: 177 --VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
             V R   +    E      GD      P  V     + +  +AAGG H+  L+  G+V+
Sbjct: 215 LSVDRILWAWGNNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVY 274

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
            WG G  G+LG G       + H++P      +G+D                    + ++
Sbjct: 275 AWGRGEHGRLGFGDD----KSSHMVPLQVQLLAGED--------------------IVQV 310

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAAGLWHT 353
           +CGG HS V+T  G + ++G G +G+ G G       P     +L   +    + GLW  
Sbjct: 311 SCGGTHSVVLTSDGRIFSYGRGDHGRLGDGRKVTTGHPMEVPINLPPPKTSTSSEGLWQA 370

Query: 354 VCISVEGR 361
             ++  GR
Sbjct: 371 NYVACGGR 378


>gi|384248236|gb|EIE21721.1| hypothetical protein COCSUDRAFT_83510, partial [Coccomyxa
           subellipsoidea C-169]
          Length = 184

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 102/180 (56%), Gaps = 14/180 (7%)

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAG 349
           +++ACG RHS  +T +G L  +G  L+ QCG  S    +  RP   +SL  ++V  +AAG
Sbjct: 1   RQVACGARHSCALTRSGRLYMWGCNLHDQCGVSSNAGTIVPRPMPVTSLDGLRVTHVAAG 60

Query: 350 LWHTVCIS---VEGRVYVFGGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGAR 405
           L HT+  +     G VY +G N+ GQLG G ++   + P+L+E+P+L       V  G+R
Sbjct: 61  LSHTIVCTDAACAGAVYTWGWNKDGQLGHGYNEPGCSRPRLVESPMLADAHVAKVCSGSR 120

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPR---NIACGWWHTLLL 461
           H A LTE G V +WGWN +GQLG G        S  P+H   LP    ++ CGWWHTL L
Sbjct: 121 HCAALTEGGDVYTWGWNAFGQLGSGCKTS----SFEPLHVQSLPSKVTDVECGWWHTLFL 176



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 26/155 (16%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDM---GQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           P  VT   G+++T VAAG  HT++ +D    G V+ WG+  +GQLG G            
Sbjct: 43  PMPVTSLDGLRVTHVAAGLSHTIVCTDAACAGAVYTWGWNKDGQLGHG------------ 90

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               +   G  RP LV       S     ++V ++  G RH A +T+ G + T+GW  +G
Sbjct: 91  ----YNEPGCSRPRLVE------SPMLADAHVAKVCSGSRHCAALTEGGDVYTWGWNAFG 140

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           Q G G       P +  SL   +V  +  G WHT+
Sbjct: 141 QLGSGCKTSSFEPLHVQSLPS-KVTDVECGWWHTL 174



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 12/88 (13%)

Query: 69  SGKLITWGSADD--EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
           +G + TWG   D   G  Y   G         P+  +A V K  +G  HC ++TE G+VY
Sbjct: 73  AGAVYTWGWNKDGQLGHGYNEPGCSRPRLVESPMLADAHVAKVCSGSRHCAALTEGGDVY 132

Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDST 154
           TWGW            FG  GS  K S+
Sbjct: 133 TWGWNA----------FGQLGSGCKTSS 150


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 126/259 (48%), Gaps = 30/259 (11%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            V+   V +GG+H L L+  G+V+ WG G +G+LG G+RI +   P LI  L         
Sbjct: 3144 VRRVAVHSGGKHALALTADGKVYSWGEGEDGKLGHGNRITL-EAPRLIESL--------- 3193

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                          AG   +  IACG  HSA VT  G L T+G G YG+ GHG  N QL 
Sbjct: 3194 --------------AGERVIS-IACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQLV 3238

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L + +V Q+A G     T+ ++  G+V+ +G   FG+LG G      +P  +E 
Sbjct: 3239 PKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAIPMNVER 3298

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
              L S     V CGA+ S  LT DG+V +WG   Y +LG G       P+LV  + G   
Sbjct: 3299 --LNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRV 3356

Query: 449  RNIACGWWHTLLLAETTQI 467
             ++A G  H L +    Q+
Sbjct: 3357 IHVAVGALHCLAVTSENQV 3375



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 129/271 (47%), Gaps = 32/271 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
              SP L  L P      +A G +   I+S  G+++  G G  G+LGLG     V TP   
Sbjct: 3082 VFSPALSALRP----VHIAGGSKTLFIVSHDGKLFACGEGTNGRLGLGHS-NNVSTPRAN 3136

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            P L H        +LVR+ +V+S              GG+H+  +T  G + ++G G  G
Sbjct: 3137 PYLSH--------VLVRRVAVHS--------------GGKHALALTADGKVYSWGEGEDG 3174

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            + GHG+      P    SL   +V  IA G  H+ C++  G +Y +G  ++G+LG G D 
Sbjct: 3175 KLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDN 3234

Query: 380  AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
             + VPK++E   L + R   V+CG+R   +  LT  G+V SWG   +G+LG G S    I
Sbjct: 3235 IQLVPKMVEA--LANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAI 3292

Query: 438  PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P  V  ++      + CG   +L L    ++
Sbjct: 3293 PMNVERLNSLGVTQVECGAQFSLALTRDGEV 3323



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 127/295 (43%), Gaps = 83/295 (28%)

Query: 203  PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
            P L+     V ITKVA  +GG+H L LS  G+V+ WG G +G+LG G+R+          
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSY-------- 4078

Query: 261  CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                     DRP L+       +  +G   V  IACGG HSA +T  G + T+G G YG+
Sbjct: 4079 ---------DRPKLI-------TALSGLEVVC-IACGGAHSACLTARGRIYTWGKGRYGR 4121

Query: 321  CGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
             GHG + DQL P    +L   +V  +A  +G   T+CI+ +  V+ +G   +G+LG G  
Sbjct: 4122 LGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4181

Query: 379  QAENVPKLLETPILESKRAKVVSCGARHSAVL---------------------------- 410
            +   +P  ++   L+  R   V CG++ S  L                            
Sbjct: 4182 EGCKLPMRIDC--LKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRP 4239

Query: 411  ------------------------TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
                                    T+ G+V +WG N  GQLG G ++    P L+
Sbjct: 4240 MRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLL 4294



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 40/277 (14%)

Query: 195  GDEFFTLSPC--LVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIK 251
            G +  T +PC  L  LNP V++     GG  TL  ++  G+V+  GYG  G+LG    I 
Sbjct: 3969 GAKVRTPTPCHALAALNP-VQLV----GGEQTLFAVTPDGKVYATGYGAGGRLG-IGGID 4022

Query: 252  MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC--GGRHSAVVTDAGA 309
             V  P L+  ++H                         ++ ++AC  GG+H   ++  G 
Sbjct: 4023 SVSQPTLLASIQHV------------------------FITKVACNSGGKHCLALSADGE 4058

Query: 310  LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
            + ++G G  G+ GHG+     RP   ++L  ++V  IA G  H+ C++  GR+Y +G  +
Sbjct: 4059 VYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGR 4118

Query: 370  FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQL 427
            +G+LG G  + + +PKL+E   L S R   V+CG+    +  +T+D  V SWG   YG+L
Sbjct: 4119 YGRLGHGDSEDQLIPKLVEA--LSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKL 4176

Query: 428  GLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            G G S    +P  +  + G     + CG   ++ L +
Sbjct: 4177 GRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALCQ 4213



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 154/392 (39%), Gaps = 76/392 (19%)

Query: 22   VYMWGY-----LPGT--SPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLI 73
            V++WG      L G   S  K P+ SP  + L      + V   GG       S  GKL 
Sbjct: 3059 VFVWGLNDKDQLGGVKGSKVKVPVFSPALSAL------RPVHIAGGSKTLFIVSHDGKLF 3112

Query: 74   TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTWGWR 131
              G   + G+  L    +  TP   P  +   V + A  +G  H +++T  G+VY+WG  
Sbjct: 3113 ACGEGTN-GRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWG-- 3169

Query: 132  ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK------RRKTSSA 185
                        G  G       G  + +  E     +  AGE V+            +A
Sbjct: 3170 -----------EGEDGKL-----GHGNRITLEAPRLIESLAGERVISIACGSAHSACVTA 3213

Query: 186  RE--------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWG 235
            R         E      GD+   L P +V      ++ +VA G R   TL L+  G+V+ 
Sbjct: 3214 RGHLYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFS 3273

Query: 236  WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
            WG G  G+LG G                  + G   P+ V +  +NS G      V ++ 
Sbjct: 3274 WGDGDFGKLGRG-----------------GSDGCAIPMNVER--LNSLG------VTQVE 3308

Query: 296  CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
            CG + S  +T  G + T+G G Y + GHG      RP+   +L   +V  +A G  H + 
Sbjct: 3309 CGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLA 3368

Query: 356  ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
            ++ E +V+ +G N  GQ G G       P L+
Sbjct: 3369 VTSENQVWAWGDNDHGQQGNGTTCVNRRPALV 3400



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 121/276 (43%), Gaps = 53/276 (19%)

Query: 198 FFTLSPCLVTLNPGVK---ITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIK 251
           + T++P LV   PG++   IT+V+    GRH L  S  G  W WG G +G+LG G +  +
Sbjct: 509 YDTMTPHLV---PGLESKTITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAAR 565

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
             P P     L H A  +                     V  +A G   SAV+T  GAL 
Sbjct: 566 DAPQP-----LHHLAHHE---------------------VVRVAAGLACSAVITSRGALY 599

Query: 312 TFGWGLYGQCGHGSTNDQLRPS----YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           T+G G  G+ GHG+  + L P      A ++  I    +  G   T+C + EG V VFG 
Sbjct: 600 TWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQVFGE 659

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
              G+ GT        P+ L    L   R   V  G    A LT+ GQV +WG     +L
Sbjct: 660 ---GEAGT--------PRALSA--LAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRL 706

Query: 428 GLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
           G G+     IP LV  + G    +++ G  H + L+
Sbjct: 707 GHGNMESTKIPKLVEALQGIKIVDLSLGASHGIALS 742



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 7/152 (4%)

Query: 312  TFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
             F WGL    Q G    +    P ++ +L  ++   IA G      +S +G+++  G   
Sbjct: 3059 VFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGEGT 3118

Query: 370  FGQLGTGVDQAENVPKLLETPILES--KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
             G+LG G   + NV      P L     R   V  G +H+  LT DG+V SWG  + G+L
Sbjct: 3119 NGRLGLG--HSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDGKL 3176

Query: 428  GLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            G G+ I    P L+  + G    +IACG  H+
Sbjct: 3177 GHGNRITLEAPRLIESLAGERVISIACGSAHS 3208



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 28/191 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           ++ +VAAG   + +++  G ++ WG G +G+LG G+ I+   TP  +      A   +R 
Sbjct: 578 EVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGT-IENCLTPQPV---SFNAHNIERI 633

Query: 273 LLVRQG---------------SVNSSGKAGRSY---------VKEIACGGRHSAVVTDAG 308
           + V  G                V   G+AG            V  +  G    A +TD G
Sbjct: 634 IDVALGWGEGSTLCCTWEGAVQVFGEGEAGTPRALSALAMFRVTRVYTGEHWHAALTDGG 693

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            + T+G G   + GHG+      P    +L  I++  ++ G  H + +S EG ++V+G +
Sbjct: 694 QVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTH 753

Query: 369 QFGQLGTGVDQ 379
           +  Q+   V Q
Sbjct: 754 ERTQISNPVPQ 764



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 60/144 (41%), Gaps = 28/144 (19%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P  +    G+++ KV  G + ++ L   G V+ WG G   +LG GS              
Sbjct: 4187 PMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGS-------------Y 4233

Query: 263  EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
            EH      RP+ V       +G  G+  V  IA G  H    TD G + T+G    GQ G
Sbjct: 4234 EHVR----RPMRV-------TGMQGKMIVS-IATGSLHCVACTDTGEVYTWGDNDEGQLG 4281

Query: 323  HGSTNDQLRPSYASSLMDIQVEQI 346
             G+T    RP     LM +QV  I
Sbjct: 4282 DGTTLAAQRPRL---LMALQVNII 4302



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 9/162 (5%)

Query: 312  TFGWGL--YGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
             +GWG    GQ G G    ++R P+   +L  +   Q+  G      ++ +G+VY  G  
Sbjct: 3953 VYGWGHNHRGQLG-GVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYG 4011

Query: 369  QFGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQ 426
              G+LG G   + + P LL +  ++      V+C  G +H   L+ DG+V SWG  + G+
Sbjct: 4012 AGGRLGIGGIDSVSQPTLLAS--IQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGK 4069

Query: 427  LGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            LG G+ +  + P L+  + G     IACG  H+  L    +I
Sbjct: 4070 LGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTARGRI 4111



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A  + G + TWG  D     +  S +H   P          +V  A G  HCV+
Sbjct: 4204 GSQFSVALCQCGSVYTWGKGDYHRLGH-GSYEHVRRPMRVTGMQGKMIVSIATGSLHCVA 4262

Query: 119  VTEAGEVYTWG 129
             T+ GEVYTWG
Sbjct: 4263 CTDTGEVYTWG 4273


>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
 gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
          Length = 815

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 187/440 (42%), Gaps = 70/440 (15%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQ-----SYLTSGKHGETPEPFPLPTEASVVKAA 110
           C  G    +  S  G + +WG    EGQ       L S K    P          VVK A
Sbjct: 39  CSSGEAHNICVSRFGDVYSWGRGK-EGQLGVPEKMLFSTK----PNLIKTLLHERVVKVA 93

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
            G  H +++T+ G VY WG    +  +K   +  + G  +     K       +   S  
Sbjct: 94  CGNFHSLALTDQGRVYEWGQLHKIDDSKTGLE-ATNGLLEMPGMSKPKYQSIIENSVSQY 152

Query: 171 RAGEEVVKRRKTSSAREESENPASGDE------------FFTLSPCLVT-LNPGVKITKV 217
             GE+ +    ++S   + ++ AS  E            +   +P  V  L    ++  +
Sbjct: 153 LNGEKEI--YDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDI 210

Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
           +AG   +  ++  G+++ WG+  +GQLGL  R     +P L+  L          L V+ 
Sbjct: 211 SAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRW-FNSSPQLVKTL----------LDVKI 259

Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY--A 335
            SV              +CG +H   VT+ G L T+G G++GQ GH +    L P    A
Sbjct: 260 VSV--------------SCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAA 305

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------------ 383
            SL  IQV Q++ G   T+ +     +Y FG  ++ QLG   ++ +++            
Sbjct: 306 FSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLG-ATEETQHLDMGSRDNHFKYS 364

Query: 384 -PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV- 441
            PK++E   LE K+ K V+CG  H+  LTED +V  WGW   G LGL     + +P LV 
Sbjct: 365 SPKVVEA--LEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLVT 422

Query: 442 PIHGFLPRNIACGWWHTLLL 461
            I G     I+ G  H+L++
Sbjct: 423 SISGEEISCISAGEKHSLIV 442



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 131/327 (40%), Gaps = 60/327 (18%)

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY---------GGEGQLGLGS 248
            F+  P L+      ++ KVA G  H+L L+D G+V+ WG          G E   GL  
Sbjct: 73  LFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWGQLHKIDDSKTGLEATNGL-- 130

Query: 249 RIKM--VPTPHLIPCLEHAAS------------------------------GKDRPLLVR 276
            ++M  +  P     +E++ S                              GK    ++ 
Sbjct: 131 -LEMPGMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGKIID 189

Query: 277 QGS---VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                 +   G      V +I+ G   SA VT +G + T+G+   GQ G         P 
Sbjct: 190 YNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQ 249

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
              +L+D+++  ++ G  H   ++ +G +Y +G   FGQLG    ++   PK +    L 
Sbjct: 250 LVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLN 309

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD--------SIDRNI----PSLV 441
             +   VSCG+  + VL  +  + ++G  +Y QLG  +        S D +     P +V
Sbjct: 310 GIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKVV 369

Query: 442 -PIHGFLPRNIACGWWHTLLLAETTQI 467
             +     + + CG  HTL L E  ++
Sbjct: 370 EALEDKKIKYVTCGHLHTLALTEDNEV 396



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 61/282 (21%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P ++    G  I   ++G  H + +S  G V+ WG G EGQLG+  ++     P+LI 
Sbjct: 23  LEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGKEGQLGVPEKMLFSTKPNLIK 82

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY-- 318
            L H                          V ++ACG  HS  +TD G +  + WG    
Sbjct: 83  TLLHER------------------------VVKVACGNFHSLALTDQGRV--YEWGQLHK 116

Query: 319 ---GQCGHGSTNDQL------RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY--VFGG 367
               + G  +TN  L      +P Y  S+++  V Q   G         E  +Y    G 
Sbjct: 117 IDDSKTGLEATNGLLEMPGMSKPKY-QSIIENSVSQYLNG---------EKEIYDSTSGN 166

Query: 368 NQFGQLGTGVDQA--ENVPKLLE----TPI-----LESKRAKVVSCGARHSAVLTEDGQV 416
           N      +  +Q+  +++ K+++    TPI     L ++    +S G   SA +T+ G++
Sbjct: 167 NDDDDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKI 226

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWH 457
            +WG+N+ GQLGL      + P LV  +      +++CG  H
Sbjct: 227 FTWGFNEKGQLGLKHRWFNSSPQLVKTLLDVKIVSVSCGRQH 268



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 43/282 (15%)

Query: 40  SPIPAR-LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
           +PI  + L   +   D+   G  F+ A ++SGK+ TWG  +++GQ  L       +P+  
Sbjct: 194 TPIQVQGLLANEEVIDI-SAGWAFSAAVTKSGKIFTWG-FNEKGQLGLKHRWFNSSPQLV 251

Query: 99  PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST---G 155
               +  +V  + G  H  +VTE G++YTWG             FG  G     S     
Sbjct: 252 KTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGV----------FGQLGHSNVKSYLHPK 301

Query: 156 KQSALPTEQAPPSDKRAGEE---VVKRRKTSSA-----------REESENPASG---DEF 198
           K +A        S    G     V+ R +   A            EE+++   G   + F
Sbjct: 302 KVAAFSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHF 361

Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVP--- 254
              SP +V      KI  V  G  HTL L++  +V+ WG+G  G LGL S R ++VP   
Sbjct: 362 KYSSPKVVEALEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLV 421

Query: 255 ---TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
              +   I C+   ++G+   L+VR   + S     +  V E
Sbjct: 422 TSISGEEISCI---SAGEKHSLIVRGSDLTSFAFDYKGLVNE 460



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 3/113 (2%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           ++++ G    GQ G  +  + L P    SL    +   ++G  H +C+S  G VY +G  
Sbjct: 2   SVISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRG 61

Query: 369 QFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           + GQLG       +  P L++T + E  R   V+CG  HS  LT+ G+V  WG
Sbjct: 62  KEGQLGVPEKMLFSTKPNLIKTLLHE--RVVKVACGNFHSLALTDQGRVYEWG 112


>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 671

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 169/403 (41%), Gaps = 63/403 (15%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
           +A ++ G L TWG  DD     L  G  G+   P  L   ++VV  A G  H ++V+  G
Sbjct: 1   MAVTQGGALWTWGGNDD---GRLGIGATGDQNLPVQLSYLSNVVSLAGGEKHSLAVSGDG 57

Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
            V++WG               SAG    +S    S L    AP     +G++      T 
Sbjct: 58  SVWSWG-------------SNSAGQLGVESLTPASVL----APVHALYSGDDFHLFYDTD 100

Query: 184 -SAREESENPASGDEFFT---LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
                +  +    D F T   LS C      G  +  +AAG + +L L   G VW WG  
Sbjct: 101 GDGTGDICDDCPYDPFKTAPGLSGC------GNAVPMLAAGTQFSLGLKTDGTVWSWGCN 154

Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
               LGLG R+    TP  +  L +A +                          +A G  
Sbjct: 155 TYATLGLGDRVDR-NTPQKVEALSNAVA--------------------------LAAGDD 187

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI-QVEQIAAGLWHTVCISV 358
           H+  +T  G++ ++GW   GQ G GS ++    S    +  I  V  IAA  +HT  ++ 
Sbjct: 188 HTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNVTAIAAQTYHTQALTR 247

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           +G V+ +G N FGQLG G     + P+ +E           ++ G  HS  +T DGQV +
Sbjct: 248 DGNVWSWGSNDFGQLGMGDQNDRDAPQKVEAL----SNVVAINAGGNHSLAVTRDGQVWA 303

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
           WG N  GQLGLGD  DR+ P  V     +   I  G  HTL L
Sbjct: 304 WGENSEGQLGLGDLWDRDAPQKVEALSNVVA-INAGGDHTLAL 345



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 84/190 (44%), Gaps = 28/190 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPTPHLIPCLEH----AASGKD 270
           +AAG  HTL L+  G VW WG+   GQLGLGS        TP  +  + +    AA    
Sbjct: 182 LAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNVTAIAAQTYH 241

Query: 271 RPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGAL 310
              L R G+V     N  G+ G                S V  I  GG HS  VT  G +
Sbjct: 242 TQALTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEALSNVVAINAGGNHSLAVTRDGQV 301

Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
             +G    GQ G G   D+  P    +L    V  I AG  HT+ ++ +G V+ +G N  
Sbjct: 302 WAWGENSEGQLGLGDLWDRDAPQKVEALS--NVVAINAGGDHTLALTRDGSVWAWGKNGR 359

Query: 371 GQLGTGVDQA 380
           GQ+GTG  Q+
Sbjct: 360 GQIGTGEGQS 369



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 97/241 (40%), Gaps = 32/241 (13%)

Query: 31  TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
            +P+K   LS   A   G D             LA +  G + +WG  +  GQ  L S  
Sbjct: 168 NTPQKVEALSNAVALAAGDD-----------HTLALTRDGSVWSWG-WNYNGQLGLGS-I 214

Query: 91  HGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG- 147
           H +T E  P   EA  +V   AA   H  ++T  G V++WG          + DFG  G 
Sbjct: 215 HEDTYESTPKKVEAISNVTAIAAQTYHTQALTRDGNVWSWG----------SNDFGQLGM 264

Query: 148 --SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-GDEFFTLSPC 204
                +D+  K  AL    A  +       V +  +  +  E SE     GD +   +P 
Sbjct: 265 GDQNDRDAPQKVEALSNVVAINAGGNHSLAVTRDGQVWAWGENSEGQLGLGDLWDRDAPQ 324

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-HLIPCLE 263
            V       +  + AGG HTL L+  G VW WG  G GQ+G G    +   P H+I   E
Sbjct: 325 KVEALS--NVVAINAGGDHTLALTRDGSVWAWGKNGRGQIGTGEGQSLYNEPVHVIYSDE 382

Query: 264 H 264
           +
Sbjct: 383 N 383


>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
 gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
          Length = 646

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 140/274 (51%), Gaps = 36/274 (13%)

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQ-VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
           T++  + I ++A G  H+L +++    V+ WG    GQLG G ++               
Sbjct: 128 TIDNKIIIKQIACGDSHSLAIAEQPYGVYSWGVNRWGQLGHGDQLN-------------- 173

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
              +++P L+      S      S+   +ACG +HS +V++ G L TFG G  G+ GHG 
Sbjct: 174 ---RNQPTLLSNIGSGSGSGNSISF-SMVACGSQHSMIVSNYGELYTFGCGTTGRLGHGD 229

Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
              + +P+  SSL+   +  +AAG+ H+ C+   G++Y +G N++GQLG G  +++ +P 
Sbjct: 230 EQPKFKPTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRYGQLGNGSVKSQTLPT 289

Query: 386 --LLETP-------------ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
               + P             +++    KVV CG  H+  L+  G+V+ +G+N  GQLG G
Sbjct: 290 PPKFQNPKLSDIQQQQQQHHLMKLNFIKVV-CGKNHTLALSSSGEVVGFGFNACGQLGNG 348

Query: 431 DSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           + +D+  P  +  +  +  +IA G++H+L L + 
Sbjct: 349 NHMDQLYPVKIEFNEHVI-DIASGYYHSLCLTDN 381



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 52/261 (19%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRP 272
            + VA G +H++I+S+ G+++ +G G  G+LG G  + K  PTP                
Sbjct: 195 FSMVACGSQHSMIVSNYGELYTFGCGTTGRLGHGDEQPKFKPTP---------------- 238

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                     S   G+S V  +A G  HS+ V   G + ++GW  YGQ G+GS   Q  P
Sbjct: 239 ---------VSSLVGKSIV-SVAAGVMHSSCVDSNGKIYSWGWNRYGQLGNGSVKSQTLP 288

Query: 333 S----------------YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           +                    LM +   ++  G  HT+ +S  G V  FG N  GQLG G
Sbjct: 289 TPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVVGFGFNACGQLGNG 348

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                ++ +L    I  ++    ++ G  HS  LT++G+  SWG+   G LGLG+     
Sbjct: 349 ----NHMDQLYPVKIEFNEHVIDIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGEVYTHQ 404

Query: 437 I-PSLVPI----HGFLPRNIA 452
             P L+P+    H F   N A
Sbjct: 405 TKPKLIPLVHIRHCFTDSNDA 425



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 123/288 (42%), Gaps = 53/288 (18%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMV 253
           GDE     P  V+   G  I  VAAG  H+  +   G+++ WG+   GQLG GS + + +
Sbjct: 228 GDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRYGQLGNGSVKSQTL 287

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
           PTP   P  ++       P L             +    ++ CG  H+  ++ +G ++ F
Sbjct: 288 PTP---PKFQN-------PKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVVGF 337

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G+   GQ G+G+  DQL P       +  V  IA+G +H++C++  G  Y +G    G L
Sbjct: 338 GFNACGQLGNGNHMDQLYPVKIE--FNEHVIDIASGYYHSLCLTDNGEAYSWGYMSDGSL 395

Query: 374 GTG-VDQAENVPKLL---------------------------------ETPILESKRAKV 399
           G G V   +  PKL+                                 +  +  SK+  V
Sbjct: 396 GLGEVYTHQTKPKLIPLVHIRHCFTDSNDAFNEIYGRQDENTTQETIDQHKLYLSKKYSV 455

Query: 400 ------VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
                 +S GA +SA++T  G++  +G+    + G     D+++P +V
Sbjct: 456 GDTVDMISAGAWNSAIITSSGKLFCFGFGDTYRNGNQSEFDQDMPIIV 503



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 128/324 (39%), Gaps = 74/324 (22%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAA 111
           G   ++  S  G+L T+G          T+G+ G   E P+  P P  +    S+V  AA
Sbjct: 201 GSQHSMIVSNYGELYTFGCG--------TTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAA 252

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---QAPP- 167
           G  H   V   G++Y+WGW            +G  G    + + K   LPT    Q P  
Sbjct: 253 GVMHSSCVDSNGKIYSWGWNR----------YGQLG----NGSVKSQTLPTPPKFQNPKL 298

Query: 168 SD-----------KRAGEEVVKRRKTSSAREESENPA-----------SGDEFFTLSPCL 205
           SD           K    +VV  +  + A   S               +G+    L P  
Sbjct: 299 SDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVK 358

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG------SRIKMVPTPHLI 259
           +  N    +  +A+G  H+L L+D G+ + WGY  +G LGLG      ++ K++P  H+ 
Sbjct: 359 IEFNE--HVIDIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGEVYTHQTKPKLIPLVHIR 416

Query: 260 PCLEHAASGKDRPL----------LVRQGSVNSSGKAGR-SYVKEIACGGRHSAVVTDAG 308
            C   +    +              + Q  +  S K      V  I+ G  +SA++T +G
Sbjct: 417 HCFTDSNDAFNEIYGRQDENTTQETIDQHKLYLSKKYSVGDTVDMISAGAWNSAIITSSG 476

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRP 332
            L  FG+G   + G+ S  DQ  P
Sbjct: 477 KLFCFGFGDTYRNGNQSEFDQDMP 500



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK-RAKVVSCGARHSAVLTEDGQ-VL 417
           G VY +G N FGQ G   +Q   VP  +  P +++K   K ++CG  HS  + E    V 
Sbjct: 97  GLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGVY 156

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN--------IACGWWHTLLLAE 463
           SWG N++GQLG GD ++RN P+L+   G    +        +ACG  H+++++ 
Sbjct: 157 SWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSN 210



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 55/272 (20%), Positives = 106/272 (38%), Gaps = 62/272 (22%)

Query: 28  LPGTSPEKSPILSPIPA-----RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
           LP     ++P LS I        L   +  K VCG      LA S SG+++ +G  +  G
Sbjct: 287 LPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKN--HTLALSSSGEVVGFG-FNACG 343

Query: 83  QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR----------- 131
           Q  L +G H +   P  +     V+  A+G+ H + +T+ GE Y+WG+            
Sbjct: 344 Q--LGNGNHMDQLYPVKIEFNEHVIDIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGEVY 401

Query: 132 ------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
                 + +P   +   F  +     +  G+Q           D+   +E + + K   +
Sbjct: 402 THQTKPKLIPLVHIRHCFTDSNDAFNEIYGRQ-----------DENTTQETIDQHKLYLS 450

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           ++ S                     G  +  ++AG  ++ I++  G+++ +G+G   + G
Sbjct: 451 KKYS--------------------VGDTVDMISAGAWNSAIITSSGKLFCFGFGDTYRNG 490

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
             S       P ++   E    G +RP  +++
Sbjct: 491 NQSEFDQ-DMPIIV---EPTKWGLERPFNIKE 518


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 128/263 (48%), Gaps = 32/263 (12%)

Query: 200  TLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
             + P L+     V I KVA  +GG+H L LS  G V+ WG G +G+LG G+R+       
Sbjct: 4005 VMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY----- 4059

Query: 258  LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
                        DRP LV           G   V +IACGG HSA +T AG L T+G G 
Sbjct: 4060 ------------DRPKLVED-------LLGIEIV-DIACGGHHSAAITSAGWLYTWGKGR 4099

Query: 318  YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
            YG+ GHG ++DQLRP    +L D +V  +A  +G   T+C++ +  V+ +G   +G+LG 
Sbjct: 4100 YGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4159

Query: 376  GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSID 434
            G      VP  L+   L       V CG++ S  LT  G V +WG   Y +LG G D   
Sbjct: 4160 GGSDGCKVP--LKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV 4217

Query: 435  RNIPSLVPIHGFLPRNIACGWWH 457
            R    +  + G    +IA G  H
Sbjct: 4218 RRPRKVAALQGKKIISIATGSLH 4240



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 140/322 (43%), Gaps = 84/322 (26%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD++    P L+       I KVA  +GG+H L L+  G+V+ WG G +G+LG G+    
Sbjct: 3019 GDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN---- 3074

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                          +  D+P L+       S K+ R  +++IACG  HSA +   G L T
Sbjct: 3075 -------------CTTLDKPRLIE------SLKSKR--IRDIACGSGHSAAIASNGELYT 3113

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQF 370
            +G G YG+ GHG T  Q++P    +L   +V Q+A G     T+ ++ +G VY +G   F
Sbjct: 3114 WGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDF 3173

Query: 371  GQLGTG----------VDQAENV------------------------------------- 383
            G+LG G          VD+   +                                     
Sbjct: 3174 GKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGND 3233

Query: 384  -----PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
                 P L+E   L  K+   V+ GA H   +T+ GQV +WG N +GQ G G +I    P
Sbjct: 3234 HHVRKPTLVEG--LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKP 3291

Query: 439  SLV-PIHGFLPRNIACGWWHTL 459
            SLV  +       ++CG  H++
Sbjct: 3292 SLVHELDDTRMNRVSCGSSHSI 3313



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 125/259 (48%), Gaps = 28/259 (10%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   +A G +   I+S  G+++  G G  G+LGLG    M   P LIP L         
Sbjct: 2984 LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCE-PKLIPFLSQ------- 3035

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
              ++++ +V+S              GG+H+  +T  G + ++G G  G+ GHG+     +
Sbjct: 3036 -YVIKKVAVHS--------------GGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDK 3080

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P    SL   ++  IA G  H+  I+  G +Y +G  ++G+LG G    +  PKL++   
Sbjct: 3081 PRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQA-- 3138

Query: 392  LESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
            L  +R   V+CG+R   +  LT DG V +WG   +G+LG G S     P LV  ++G   
Sbjct: 3139 LSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGV 3198

Query: 449  RNIACGWWHTLLLAETTQI 467
              + CG   +L L +  ++
Sbjct: 3199 VQVECGAQFSLALTKYGEV 3217



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 32/255 (12%)

Query: 214 ITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           +T +A+   G+H L L+  G V+ WG G  G+LG G  I                   D 
Sbjct: 509 VTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNI-----------------SHDE 551

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P L+               +  IACG  +SA ++ +G L T+G G YG+ GHGS +D   
Sbjct: 552 PKLIE--------TLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTV 603

Query: 332 PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           P+  ++L    V  +A  +G   T+C++  G V+ +G   +G+LG G       PK+++ 
Sbjct: 604 PTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDK 663

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            +L+    +V  CG + SA LT  G+V +WG     +LG G+      P L+  +     
Sbjct: 664 -LLDINVVRVF-CGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKI 721

Query: 449 RNIACGWWHTLLLAE 463
           ++++ G  H L L E
Sbjct: 722 KDLSVGGTHILALTE 736



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 110/252 (43%), Gaps = 33/252 (13%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD      P L+       I  +A G  ++  LS  G+++ WG G  G+LG GS    V 
Sbjct: 544 GDNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDD-VT 602

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLT 312
            P L+  L+                           V  +ACG     +  VT +G + +
Sbjct: 603 VPTLVTTLKG------------------------HMVVHVACGSGDSQTLCVTASGIVFS 638

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G YG+ G G ++    P     L+DI V ++  G   +  ++  G VY +G     +
Sbjct: 639 WGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYR 698

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG--LG 430
           LG G ++    PKL+E+  L  K+ K +S G  H   LTED  V  WG N YGQ+   LG
Sbjct: 699 LGHGNEEHVRYPKLIES--LRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQIDPTLG 756

Query: 431 DSIDRNIPSLVP 442
             +    PSL P
Sbjct: 757 PVVSE--PSLCP 766



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 29/215 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L P +V      K+  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 4106 GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG----- 4160

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G   PL +          AG   +K + CG + S  +T +GA+ T
Sbjct: 4161 ------------GSDGCKVPLKI-------DSLAGLGVIK-VECGSQFSVALTRSGAVYT 4200

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHG+ +   RP   ++L   ++  IA G  H V  S +G V+ +G N  GQ
Sbjct: 4201 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQ 4260

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            LG G   A   P+L+    L+ K+   V+CG+ H+
Sbjct: 4261 LGDGTTSALQRPRLVHA--LQGKKITRVACGSAHT 4293



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G ++GWG+   GQLG   G++IK+       PC   +A    RP+               
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPA-----PCESLSAL---RPI--------------- 3968

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                ++A G +    VT  G + + G+G  G+ G G T+  + P+   S+  + ++++A 
Sbjct: 3969 ----QLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAV 4024

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + +S EG VY +G    G+LG G   + + PKL+E   L       ++CG  H
Sbjct: 4025 NSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVED--LLGIEIVDIACGGHH 4082

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA +T  G + +WG  +YG+LG GDS D+  P +V  +  +   ++ACG
Sbjct: 4083 SAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG 4131



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 5/139 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P  +  L  ++   IA G      +S EG++Y  G    G+LG G D     PKL+  P 
Sbjct: 2975 PVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLI--PF 3032

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT+DG+V SWG  + G+LG G+    + P L+  +     
Sbjct: 3033 LSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRI 3092

Query: 449  RNIACGWWHTLLLAETTQI 467
            R+IACG  H+  +A   ++
Sbjct: 3093 RDIACGSGHSAAIASNGEL 3111



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 1/153 (0%)

Query: 307  AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            +GA+  +G    GQ G         P+   SL  ++  Q+A G      ++ +G+VY  G
Sbjct: 3931 SGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTG 3990

Query: 367  GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
                G+LG G   +  VP LLE+      +   V+ G +H   L+ +G V SWG    G+
Sbjct: 3991 YGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4050

Query: 427  LGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            LG G+ +  + P LV  + G    +IACG  H+
Sbjct: 4051 LGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHS 4083



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
            G+ + KV  G + ++ L+  G V+ WG G   +LG G+    V  P  +  L+       
Sbjct: 4176 GLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKVAALQ------- 4227

Query: 271  RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                         GK     +  IA G  H    +D G + T+G    GQ G G+T+   
Sbjct: 4228 -------------GKK----IISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQ 4270

Query: 331  RPSYASSLMDIQVEQIAAGLWHTV 354
            RP    +L   ++ ++A G  HT+
Sbjct: 4271 RPRLVHALQGKKITRVACGSAHTL 4294



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 77/218 (35%), Gaps = 70/218 (32%)

Query: 56   CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
            CG G    L  ++   + +WG  D     Y   G+ G      PL  ++     V+K   
Sbjct: 4130 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPLKIDSLAGLGVIKVEC 4184

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G    V++T +G VYTWG                 G + +   G                
Sbjct: 4185 GSQFSVALTRSGAVYTWG----------------KGDYHRLGHG---------------- 4212

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
              + V + RK ++ +                        G KI  +A G  H +  SD G
Sbjct: 4213 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDKG 4248

Query: 232  QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
            +V+ WG   EGQLG G+    +  P L+    HA  GK
Sbjct: 4249 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4281



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 9/75 (12%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE----ASVVKAAAGWA 114
            G  F+LA ++ G++ TWG  D     Y   G   +     P   E      +V  A G  
Sbjct: 3204 GAQFSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGAL 3258

Query: 115  HCVSVTEAGEVYTWG 129
            HC++VT+ G+VY WG
Sbjct: 3259 HCLAVTDTGQVYAWG 3273


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 162/370 (43%), Gaps = 59/370 (15%)

Query: 80  DEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
           D GQ  L  G + + P P  L T     +V  AA   H   +T+ GEVYT G        
Sbjct: 11  DLGQ--LGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTG-------- 60

Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--G 195
             + D G  G       G +  +   +    D      +    K + A  E+   AS  G
Sbjct: 61  --SNDAGQLGV-----RGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGG 113

Query: 196 DEFFTL-----------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
           DE+  L            P +V  +  +  ++VAAGG HTL L+  G V+ +G G  G L
Sbjct: 114 DEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGAL 173

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G G+ +    TP L+  L                            V +IACG  HSA +
Sbjct: 174 GHGN-LDGCSTPSLVKSLWGLG------------------------VTQIACGENHSAAL 208

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
           T  G + T+G G YGQ GHGST +   P    +L+D  V QIA G  HT+ I+ +GR++ 
Sbjct: 209 TVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFS 268

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G   +GQ G G  +    PK  +   LE +    VS GARH+ VL + G+V  WG  + 
Sbjct: 269 WGHGLWGQTGHGTKEDVLSPK--QVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQ 326

Query: 425 GQLGLGDSID 434
            QLG  D  D
Sbjct: 327 RQLGTCDRCD 336



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 130/266 (48%), Gaps = 36/266 (13%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIP 260
           +P  ++   G  I  +AA   HT  L+D G+V+  G    GQLG+ G   ++VP      
Sbjct: 25  TPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVP------ 78

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                         +R  ++++        V  IACG +H+  VT+ GAL ++G   YGQ
Sbjct: 79  --------------IRVAALDTH------MVTHIACGFKHTVAVTETGALASWGGDEYGQ 118

Query: 321 CGHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G  S N  D ++P       D+   ++AAG +HT+ ++  G VY FG    G LG G  
Sbjct: 119 LGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNL 178

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
              + P L+++  L       ++CG  HSA LT DG+V +WG  KYGQLG G +  +NI 
Sbjct: 179 DGCSTPSLVKS--LWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGST--QNIK 234

Query: 439 SLVPIHGFLPRN---IACGWWHTLLL 461
             V +   +  +   IACG  HTL +
Sbjct: 235 LPVAVKALVDHDVIQIACGGDHTLAI 260



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 5/156 (3%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           A+   G G  GQ G G  +D   P+  S+L+   +  IAA  +HT  ++ EG VY  G N
Sbjct: 3   AVYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSN 62

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             GQLG    + + VP  +    L++     ++CG +H+  +TE G + SWG ++YGQLG
Sbjct: 63  DAGQLGVRGMEEQVVP--IRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120

Query: 429 L--GDSIDRNIPSLVPIHGFLP-RNIACGWWHTLLL 461
              G+ +D   P +V     L    +A G +HTL L
Sbjct: 121 FDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLAL 156



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 62/167 (37%), Gaps = 24/167 (14%)

Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           V + A G  H  ++T  G+V+TWG              G  G     ST +   LP    
Sbjct: 195 VTQIACGENHSAALTVDGKVFTWGR-------------GKYGQLGHGST-QNIKLPVAVK 240

Query: 166 PPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKIT 215
              D    +       T +   +                G +   LSP  V    G  + 
Sbjct: 241 ALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRVLV 300

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           +V+AG RHT++L D G+V+GWG   + QLG   R       H+   L
Sbjct: 301 QVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCDRCDFSTYGHICVSL 347


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 188/428 (43%), Gaps = 46/428 (10%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G G++LA    G +  WG     G   L  G       P   P  + VV  AAG +H ++
Sbjct: 595  GNGYSLAVDAQGSVWAWGY---NGMGQLGDGTTTPRVTPTQAPALSGVVALAAGDSHSLA 651

Query: 119  VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
            +   G  + WG  +           G A + ++ +      L    A  +   A   V+ 
Sbjct: 652  LRADGVAWAWGGND-------QGQLGDATTLERSTPAAVPGLAHVVALAAGN-AHSLVLH 703

Query: 179  RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK-VAAGGRHTLILSDMGQVWGWG 237
               TSS+   +     GD   TL P  V + PG    K VAAGG H+L +   G VW WG
Sbjct: 704  ADGTSSSWGNNAYGQLGDGTSTLHPVPVQV-PGPSAMKGVAAGGSHSLAVRSDGTVWAWG 762

Query: 238  YGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV-----NSSGK--- 285
              G G+LG G+ ++  P P  +  L  A   ++G +  L V+  G+V     NS G+   
Sbjct: 763  NNGSGELGDGTGLQR-PRPVQVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGD 821

Query: 286  ------------AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                        +G + V  ++ G  HS  +   G +  +G+  YGQ G  ++  +L P 
Sbjct: 822  GTGITRYVPVRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPI 881

Query: 334  YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
                L    V  IAAG  H++ +  +G V+ +G N +GQLG G     + P  ++ P L 
Sbjct: 882  QVPGLTG--VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSPP--VQVPGLA 937

Query: 394  SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC 453
               +  V+ G  HS  +  +G V +WG+N +GQLG G +  R +P  VPI        A 
Sbjct: 938  GMVS--VAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLP--VPISSSSGVIAAA 993

Query: 454  GWWHTLLL 461
              WH+L++
Sbjct: 994  ANWHSLVV 1001



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 172/421 (40%), Gaps = 72/421 (17%)

Query: 34   EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
            + +  L P+P ++ G  + K V  GG   +LA    G +  WG   + G   L  G   +
Sbjct: 721  DGTSTLHPVPVQVPGPSAMKGVAAGGS-HSLAVRSDGTVWAWG---NNGSGELGDGTGLQ 776

Query: 94   TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
             P P  +    S V  +AG  H ++V   G V+ WG              G++     D 
Sbjct: 777  RPRPVQVQGLGSAVAVSAGTNHSLAVQSDGTVWAWG--------------GNSQGQLGDG 822

Query: 154  TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFF------TLS 202
            TG    +P        + +G   V      SA     R +    A G  F+      T +
Sbjct: 823  TGITRYVPV-------RVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATST 875

Query: 203  PCLVTLN-PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
              LV +  PG+  +  +AAG  H+L +   G VW WGY   GQLG G++I+  P P  +P
Sbjct: 876  QRLVPIQVPGLTGVVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSP-PVQVP 934

Query: 261  CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
             L    S                          +A G  HS  V   G +  +G+  +GQ
Sbjct: 935  GLAGMVS--------------------------VAAGTYHSLAVHSNGTVWAWGYNNHGQ 968

Query: 321  CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
             G G+T  +L P   SS   +     AA  WH++ +  +G V+ +G N   QLG G    
Sbjct: 969  LGDGTTTQRLLPVPISSSSGVIA---AAANWHSLVVRTDGTVWGWGSNNASQLGDGSTSD 1025

Query: 381  ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
              +P    TP       + +S GA HS  L  DG V +WG+   GQLG G    R +P+ 
Sbjct: 1026 RKMP----TPSSVPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRLVPAG 1081

Query: 441  V 441
            V
Sbjct: 1082 V 1082



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 193/467 (41%), Gaps = 78/467 (16%)

Query: 18  KETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLIT 74
            +  V+ WG    G   + + I   +P R+   DS   V     G+  +LA    G +  
Sbjct: 54  SDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLDS---VVALAVGYQHSLALRSDGTVWA 110

Query: 75  WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
           WG   D     L  G   ++  P  + +   VV  AAG  H +++   G V+ WG     
Sbjct: 111 WG---DNFFGQLGDGSDAQSQVPIQVWSLNGVVAIAAGDHHSLALLSDGSVWAWG----- 162

Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP-- 192
                   + + G    D+T   S LP +        +G   +    T S    S+    
Sbjct: 163 --------YNAHGQLGDDTT-VASPLPVQ----VQGLSGVVALSAGSTHSLAVLSDGKVK 209

Query: 193 ASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
           A GD ++            +P LV+   GVK   V AG  H+L L   G V  WG  G G
Sbjct: 210 AWGDNYYGQLGDGSSTERWTPVLVSSLTGVK--SVVAGTFHSLALCSDGTVRAWGENGSG 267

Query: 243 QLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV-----NSSGKAGRSYV-- 291
           QLG+ S  +  P P ++P L +    A+G    L +R  G+V     N  G+ G   +  
Sbjct: 268 QLGISSTTRR-PVPVVVPGLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQ 326

Query: 292 -------------KEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRPSYAS 336
                        K IA GG HS  +   G  +T+ WG    GQ G G ++ QLRP+   
Sbjct: 327 QLTPVQVPGVGRMKSIAAGGAHSLAMRADG--ITWAWGDDSQGQLGDGQSSQQLRPAR-- 382

Query: 337 SLMDIQVEQ-IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
            ++  ++   +  G  H++ +  +G V+ +G N  GQLG G D    +P+ L   +    
Sbjct: 383 -VLGQRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTD----LPRTLPVQVPGLA 437

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
               +S    HS     DG V +WG N +GQLG G +  R +P  VP
Sbjct: 438 GVHTLSATTSHSLAARADGTVWAWGDNAFGQLGDGTTTQRLLPVQVP 484



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 180/435 (41%), Gaps = 65/435 (14%)

Query: 62  FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
            +LA    G +  WG   D     L  G   +   P  +P  A V   ++   H ++V+ 
Sbjct: 448 HSLAARADGTVWAWG---DNAFGQLGDGTTTQRLLPVQVPGLAGVDTVSSMHQHSLAVSR 504

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR----AGEE-- 175
            G V+ WG             F  +G     +T   S L   Q P         AG    
Sbjct: 505 DGTVWAWG-------------FNGSGRLGDGTT--LSRLTPVQVPGLSSMVAVAAGSTHS 549

Query: 176 -VVKRRKTSSAREESENPASGD--EFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMG 231
             ++   T  A  ++ N A GD      LSP  V   PG+  +  +AAG  ++L +   G
Sbjct: 550 LALRADGTVWAWGDNSNGALGDGTTLRRLSPVQV---PGLSGVVALAAGNGYSLAVDAQG 606

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQGSV------NS 282
            VW WGY G GQLG G+    V TP   P L      A+G    L +R   V      N 
Sbjct: 607 SVWAWGYNGMGQLGDGTTTPRV-TPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGND 665

Query: 283 SGKAGR---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
            G+ G                ++V  +A G  HS V+   G   ++G   YGQ G G++ 
Sbjct: 666 QGQLGDATTLERSTPAAVPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTST 725

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
             L P          ++ +AAG  H++ +  +G V+ +G N  G+LG G       P+ +
Sbjct: 726 --LHPVPVQVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQR--PRPV 781

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGF 446
           +   L S  A  VS G  HS  +  DG V +WG N  GQLG G  I R +P  V  ++G 
Sbjct: 782 QVQGLGS--AVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSGLNGV 839

Query: 447 LPRNIACGWWHTLLL 461
           +   ++ G  H+L L
Sbjct: 840 MA--VSAGSAHSLAL 852



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 158/376 (42%), Gaps = 68/376 (18%)

Query: 97  PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           P PL  E    + AAG AH + +   G V+ WG             +G  G    D TG 
Sbjct: 34  PPPLGHE----QVAAGAAHSLMLRSDGTVWAWG----------DNTYGQLG----DGTGI 75

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF----------TLSPCLV 206
              LP          A    V  + + + R +    A GD FF          +  P  V
Sbjct: 76  TQRLPVRVQSLDSVVA--LAVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQV 133

Query: 207 -TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
            +LN    +  +AAG  H+L L   G VW WGY   GQLG  + +               
Sbjct: 134 WSLN---GVVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVA-------------- 176

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                 PL V+          G S V  ++ G  HS  V   G +  +G   YGQ G GS
Sbjct: 177 -----SPLPVQ--------VQGLSGVVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGS 223

Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
           + ++  P   SSL    V+ + AG +H++ +  +G V  +G N  GQLG        VP 
Sbjct: 224 STERWTPVLVSSLTG--VKSVVAGTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPVPV 281

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG 445
           ++  P L + +A  ++ G+ HS  L  DG V +WG N +GQ+G G    +  P  VP  G
Sbjct: 282 VV--PGLTNVQA--LAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQVPGVG 337

Query: 446 FLPRNIACGWWHTLLL 461
            + ++IA G  H+L +
Sbjct: 338 RM-KSIAAGGAHSLAM 352



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 189/466 (40%), Gaps = 60/466 (12%)

Query: 10  ENEKMEECKETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
           ++  +    +  V+ WGY   G   + + + SP+P ++ G  S       G   +LA   
Sbjct: 146 DHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQG-LSGVVALSAGSTHSLAVLS 204

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
            GK+  WG   D     L  G   E   P  + +   V    AG  H +++   G V  W
Sbjct: 205 DGKVKAWG---DNYYGQLGDGSSTERWTPVLVSSLTGVKSVVAGTFHSLALCSDGTVRAW 261

Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
           G          +   G + + ++        L   QA  +   A    ++   T  A   
Sbjct: 262 G-------ENGSGQLGISSTTRRPVPVVVPGLTNVQALAAGS-AHSLALRSDGTVRAWGN 313

Query: 189 SENPASGDEFFT--LSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           +++   G+   +  L+P  V   PGV ++  +AAGG H+L +   G  W WG   +GQLG
Sbjct: 314 NDHGQVGNGTISQQLTPVQV---PGVGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLG 370

Query: 246 -------------LGSRIKM-VPTPHLIPCLEHA---------------ASGKDRPLLVR 276
                        LG RI+M + T +      HA                 G D P   R
Sbjct: 371 DGQSSQQLRPARVLGQRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLP---R 427

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
              V   G AG   V  ++    HS      G +  +G   +GQ G G+T  +L P    
Sbjct: 428 TLPVQVPGLAG---VHTLSATTSHSLAARADGTVWAWGDNAFGQLGDGTTTQRLLPVQVP 484

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
            L    V+ +++   H++ +S +G V+ +G N  G+LG G   +   P  ++ P L S  
Sbjct: 485 GLAG--VDTVSSMHQHSLAVSRDGTVWAWGFNGSGRLGDGTTLSRLTP--VQVPGLSSMV 540

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
           A  V+ G+ HS  L  DG V +WG N  G LG G ++ R  P  VP
Sbjct: 541 A--VAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVP 584



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 90/251 (35%), Gaps = 75/251 (29%)

Query: 11   NEKMEECKETVVYMWGYL------PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFAL 64
            +  +    +  V+ WGY        GT  ++SP     P ++ G      V  G    +L
Sbjct: 897  HHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSP-----PVQVPGLAGMVSVAAG-TYHSL 950

Query: 65   ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
            A   +G +  WG  ++ GQ  L  G   +   P P+ + + V+ AAA W H + V   G 
Sbjct: 951  AVHSNGTVWAWGY-NNHGQ--LGDGTTTQRLLPVPISSSSGVIAAAANW-HSLVVRTDGT 1006

Query: 125  VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
            V+ WG                  S   D +     +PT  + P+  R+            
Sbjct: 1007 VWGWGSNNA--------------SQLGDGSTSDRKMPTPSSVPNGVRS------------ 1040

Query: 185  AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
                                            +++G  H+L L   G VW WG+G  GQL
Sbjct: 1041 --------------------------------ISSGANHSLALRSDGTVWAWGFGNSGQL 1068

Query: 245  GLG-SRIKMVP 254
            G G   +++VP
Sbjct: 1069 GDGVMSMRLVP 1079


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  121 bits (303), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 171/421 (40%), Gaps = 96/421 (22%)

Query: 38   ILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQ--SYLTSGKHGE 93
            ++ P+PA        K V    CG+  A   +  G+L TWG+ +  GQ    L +GKH  
Sbjct: 1182 LVHPMPALRFNEKHAKSV---SCGWEHAAVITVDGELFTWGN-NTSGQLGHGLAAGKHQS 1237

Query: 94   TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
            TP       +  ++  + G  H V +  +  +Y+WG                        
Sbjct: 1238 TPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWG------------------------ 1273

Query: 154  TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
             GK   L    + P +                      P   +EF            G K
Sbjct: 1274 NGKYGQLGHGVSTPHNL---------------------PKRIEEF-----------AGQK 1301

Query: 214  ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
            I+ +A G  HTL+L   G ++ +G    GQLGL      +P P                 
Sbjct: 1302 ISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIP----------------T 1345

Query: 274  LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
             V    ++ +G+  R  V  I CG  HS + T  G + +FG    GQ GHGST     P 
Sbjct: 1346 RVNTADIHHAGQPTR--VTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPK 1403

Query: 334  YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
                L    +++I  G +HTV  +    VY +G  +   LGTG ++ E VPKL+E  +  
Sbjct: 1404 LIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVE--LFV 1461

Query: 394  SKRAKVVSCGARHSAVLTE-------DGQVLSWGWNKYGQLGLGD-----SIDRNIPSLV 441
            +KR + V CG  H+A LT+        G V   G +++G+LG+G      S+D+  P+++
Sbjct: 1462 NKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAII 1521

Query: 442  P 442
            P
Sbjct: 1522 P 1522



 Score =  102 bits (253), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 29/257 (11%)

Query: 217  VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
            V+ G  H  +++  G+++ WG    GQLG G                  A+GK +   +R
Sbjct: 1199 VSCGWEHAAVITVDGELFTWGNNTSGQLGHG-----------------LAAGKHQSTPMR 1241

Query: 277  QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
              S+       ++ +  ++ GG H+ V+  +  + ++G G YGQ GHG +     P    
Sbjct: 1242 VESLK------QTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIE 1295

Query: 337  SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPIL--- 392
                 ++  IA G WHT+ +   G ++ FG N+ GQLG   +     +P  + T  +   
Sbjct: 1296 EFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHA 1355

Query: 393  -ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRN 450
             +  R   + CG  HS + T  G V S+G N  GQLG G +     P L+  + G   + 
Sbjct: 1356 GQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKR 1415

Query: 451  IACGWWHTLLLAETTQI 467
            I CG +HT++  +   +
Sbjct: 1416 ITCGPYHTVVTTDLDSV 1432



 Score =  100 bits (250), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 114/260 (43%), Gaps = 39/260 (15%)

Query: 214  ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
            I  ++ GG HT+++     ++ WG G  GQLG G     V TPH +P      +G+    
Sbjct: 1250 IMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHG-----VSTPHNLPKRIEEFAGQK--- 1301

Query: 274  LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                             +  IA G  H+ V+   G L  FG   +GQ G       L   
Sbjct: 1302 -----------------ISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIP 1344

Query: 334  YASSLMDI-------QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
               +  DI       +V  I  G  H+V  +  G VY FG N  GQLG G  ++   PKL
Sbjct: 1345 TRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKL 1404

Query: 387  LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
            ++   L+ K  K ++CG  H+ V T+   V  WG  ++  LG G + +  +P LV +  F
Sbjct: 1405 IQG--LKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVEL--F 1460

Query: 447  LPR---NIACGWWHTLLLAE 463
            + +    + CG +HT  L +
Sbjct: 1461 VNKRVERVVCGLYHTATLTQ 1480



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 13/139 (9%)

Query: 330  LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN------V 383
            + P  A    +   + ++ G  H   I+V+G ++ +G N  GQLG G+   ++      V
Sbjct: 1183 VHPMPALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRV 1242

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-P 442
              L +TPI+      ++S G  H+ V+     + SWG  KYGQLG G S   N+P  +  
Sbjct: 1243 ESLKQTPIM------MMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEE 1296

Query: 443  IHGFLPRNIACGWWHTLLL 461
              G    +IA G+WHTL+L
Sbjct: 1297 FAGQKISSIATGYWHTLVL 1315



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 39/252 (15%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P L+    G  I ++  G  HT++ +D+  V+ WG G    LG GS         L+P L
Sbjct: 1402 PKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSN-----KNELVPKL 1456

Query: 263  EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD-------AGALLTFGW 315
                  K                     V+ + CG  H+A +T         G +   G 
Sbjct: 1457 VELFVNKR--------------------VERVVCGLYHTATLTQPMGDSNTGGNVYICGS 1496

Query: 316  GLYGQCGHGS-----TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
              +G+ G G      + D+  P+   S+    V  +A+G      I+  G +Y++G    
Sbjct: 1497 SEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGALYMWGAGTH 1556

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            GQ+G G +Q   +P  +     +++   +V      S +      +L+   N+Y Q GL 
Sbjct: 1557 GQIGNGKNQDTWIPTRVSLSSEKNQNQFIVD--ESGSTITLSSSMLLTEKNNRYTQEGLE 1614

Query: 431  DSIDRNIPSLVP 442
            +++ +N     P
Sbjct: 1615 ETLRKNANGYRP 1626


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 135/260 (51%), Gaps = 32/260 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V +GG+H + L+  G+V+ WG G +G+LG G+R+ +                 D+
Sbjct: 2981 IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNL-----------------DK 3023

Query: 272  PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
            P ++         +A RS  +++IACG  HSA +T +G L T+G G YG+ GHG    QL
Sbjct: 3024 PKMI---------EALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQL 3074

Query: 331  RPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            +P    SL+  ++ Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+P  +E
Sbjct: 3075 KPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIE 3134

Query: 389  TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
               L +     + CGA+ S  LT+ G+V +WG   Y +LG G       P+++  +    
Sbjct: 3135 R--LNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKK 3192

Query: 448  PRNIACGWWHTLLLAETTQI 467
              ++A G  H L + +T Q+
Sbjct: 3193 VIHVAVGALHCLAVTDTGQV 3212



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 125/238 (52%), Gaps = 33/238 (13%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAAS 267
           G+ + K+AA   G+H L L+   +V+ WG G  G+LG G +  K  PT      L  A  
Sbjct: 512 GINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPT------LIQALK 565

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
           GKD                    + ++ CGG +SA ++  GAL T+G G YG+ GHG+  
Sbjct: 566 GKD--------------------IIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAE 605

Query: 328 DQLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
           D L P+  S+L D  + ++A G +  HT+CI+ +G+VY +G   +G+LG G      +P+
Sbjct: 606 DCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPR 665

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           L+E   L++ +   V CGA+ S  L+EDG V +WG  +  +LG     +   P +V +
Sbjct: 666 LIEK--LQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEV 721



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/235 (34%), Positives = 116/235 (49%), Gaps = 31/235 (13%)

Query: 200  TLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
             L P L+     V I K+A  +GG+H L LS    V+ WG G +G+LG G+R+    TP 
Sbjct: 3943 VLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETPK 4001

Query: 258  LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
            LI  L+                           + +IACGG HSA +T  G L T+G G 
Sbjct: 4002 LIEALQGYE------------------------IIDIACGGAHSAAITSTGQLYTWGKGR 4037

Query: 318  YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
            YG+ GHG + DQL+P     L+  +V  +A  +G   T+CI+ +  V+ +G   +G+LG 
Sbjct: 4038 YGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGR 4097

Query: 376  GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G      VPK +E+  L       V CG++ S  LT  G V +WG   Y +LG G
Sbjct: 4098 GGSDGCKVPKKIES--LAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4150



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 166/416 (39%), Gaps = 63/416 (15%)

Query: 22   VYMWGY-----LPGT--SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
            V++WG      L G   S  K P+ S   ++L     W     GG       S  GKL  
Sbjct: 2896 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQL-----WPIHIAGGSKSLFIVSHEGKLYA 2950

Query: 75   WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTWGWRE 132
             G   + G+  L    +   P P P  ++  + K A  +G  H +++T  G+V++WG  E
Sbjct: 2951 CGEGTN-GRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE 3009

Query: 133  CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE----- 187
                       G       D      AL +++    D   G         +S+ E     
Sbjct: 3010 -------DGKLGHGNRLNLDKPKMIEALRSKKI--RDIACGSS--HSAAITSSGELYTWG 3058

Query: 188  --ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQ 243
              E      GD    L P L+    G +I +VA G R   TL L+D G V+ WG G  G+
Sbjct: 3059 LGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGK 3118

Query: 244  LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
            LG G   +    PH I  L                            V +I CG + S  
Sbjct: 3119 LGRGGS-EGCNIPHNIERLNALE------------------------VVQIECGAQFSLA 3153

Query: 304  VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
            +T  G + T+G G Y + GHGS     +P+   SL D +V  +A G  H + ++  G+VY
Sbjct: 3154 LTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVY 3213

Query: 364  VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT-EDGQVLS 418
             +G N  GQ G G       P L+    LE      V+CG+ HS   T +D QV+S
Sbjct: 3214 AWGDNDHGQQGNGTTIVNRKPALVHG--LEDVHINRVACGSSHSIAWTLQDTQVVS 3267



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 28/254 (11%)

Query: 217  VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
            +A G +   I+S  G+++  G G  G+LGLG     VP P  IP L           +++
Sbjct: 2932 IAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHS-NNVPYPRPIPFLSQ--------YVIK 2982

Query: 277  QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
            + +V+S              GG+H+  +T  G + ++G G  G+ GHG+  +  +P    
Sbjct: 2983 KVAVHS--------------GGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIE 3028

Query: 337  SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
            +L   ++  IA G  H+  I+  G +Y +G  ++G+LG G +  +  PKL+++  L   R
Sbjct: 3029 ALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKS--LVGHR 3086

Query: 397  AKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIAC 453
               V+CG+R   +  LT++G V SWG   +G+LG G S   NIP ++  ++      I C
Sbjct: 3087 IVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIEC 3146

Query: 454  GWWHTLLLAETTQI 467
            G   +L L +T ++
Sbjct: 3147 GAQFSLALTKTGEV 3160



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 96/215 (44%), Gaps = 29/215 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L P L+    G K+  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 4044 GDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS-DG 4102

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
               P  I  L                       AG   +K + CG + S  +T +G++ T
Sbjct: 4103 CKVPKKIESL-----------------------AGLGVIK-VECGSQFSVALTRSGSVYT 4138

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHG+     RP   ++L   ++  IA G  H V  S EG V+ +G N  GQ
Sbjct: 4139 WGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQ 4198

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            LG     A   P+L+    L+ K+   V+CG+ H+
Sbjct: 4199 LGDDTTNAIQRPRLVSA--LQGKKITNVACGSAHT 4231



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 29/249 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD      P L+    G  I  V  GG ++  +S  G ++ WG G  G+LG G+    + 
Sbjct: 550 GDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCL- 608

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLT 312
           TP +I  L                           ++ ++ACG    H+  +T  G + +
Sbjct: 609 TPTMISALSD------------------------EHIIKVACGSFYAHTLCITSQGKVYS 644

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G YG+ G G ++    P     L ++++ Q+  G   +V +S +G VY +G  +  +
Sbjct: 645 WGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWK 704

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG   ++    P+++E  +L  ++   VS G  H   LT+ G+V  WG N+  Q+     
Sbjct: 705 LGHPTEENVRFPEMVE--VLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSE 762

Query: 433 IDRNIPSLV 441
           +    P L+
Sbjct: 763 LFVQQPRLI 771



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 114/229 (49%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G ++GWG+   GQLG   G+++K +PT    PC    A    RP+               
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVK-IPT----PC---EALSTLRPV--------------- 3906

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                ++  G +    VT  G +   G+G  G+ G G T+  L P+   S+  + +++IA 
Sbjct: 3907 ----QLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAV 3962

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + +S +  VY +G    G+LG G   A   PKL+E   L+      ++CG  H
Sbjct: 3963 NSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEA--LQGYEIIDIACGGAH 4020

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA +T  GQ+ +WG  +YG+LG GDS D+  P L+  + G+   ++ACG
Sbjct: 4021 SAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACG 4069



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 29/217 (13%)

Query: 201 LSPCLVTLNPGVKITKVAAGG--RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L+P +++      I KVA G    HTL ++  G+V+ WG G  G+LG G           
Sbjct: 608 LTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRG----------- 656

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
                  + G   P L+         K     + ++ CG + S  +++ G + T+G G  
Sbjct: 657 ------GSDGSKLPRLIE--------KLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEG 702

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            + GH +  +   P     L D +V  ++ G+ H + ++ +G VY +G N+  Q+    +
Sbjct: 703 WKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSE 762

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
                P+L+E   L+ ++   V CG   S   T+D +
Sbjct: 763 LFVQQPRLIEA--LKGQKVVGVCCGPAQSFAWTDDNE 797



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 7/152 (4%)

Query: 312  TFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
             F WGL    Q G    +    P  +  L  +    IA G      +S EG++Y  G   
Sbjct: 2896 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGT 2955

Query: 370  FGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQL 427
             G+LG G   + NVP     P L     K V+   G +H+  LT DG+V SWG  + G+L
Sbjct: 2956 NGRLGLG--HSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3013

Query: 428  GLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            G G+ ++ + P ++  +     R+IACG  H+
Sbjct: 3014 GHGNRLNLDKPKMIEALRSKKIRDIACGSSHS 3045



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 46/268 (17%)

Query: 18  KETVVYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
           K+  VY WG   G       TS ++ P L  I A L G D     CGG   ++ A S +G
Sbjct: 532 KDYEVYSWGNGDGGRLGHGDTSTKEEPTL--IQA-LKGKDIIDVECGGT--YSAAISANG 586

Query: 71  KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG--WAHCVSVTEAGEVYTW 128
            L TWG  +  G+    + +   TP      ++  ++K A G  +AH + +T  G+VY+W
Sbjct: 587 ALYTWGRGN-YGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSW 645

Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
           G            D+G  G    D     S LP       + +  +     + + +  E+
Sbjct: 646 G----------DGDYGKLGRGGSDG----SKLPRLIEKLQNVKIVQVYCGAQFSVALSED 691

Query: 189 SE-------------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
                          +P   +  F   P +V +    K+  V+ G  H L L+D G+V+G
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRF---PEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYG 748

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           WG     Q+   S +  V  P LI  L+
Sbjct: 749 WGKNENKQICDSSEL-FVQQPRLIEALK 775



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 3/158 (1%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G+VY  G    
Sbjct: 3873 YGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGYGAG 3932

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G   +  VP LLE+      +   V+ G +H   L+ D  V SWG    G+LG G
Sbjct: 3933 GRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHG 3992

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            + +    P L+  + G+   +IACG  H+  +  T Q+
Sbjct: 3993 NRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQL 4030



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A + SG + TWG  D     + T G+H   P+         ++  A G  HCV+
Sbjct: 4123 GSQFSVALTRSGSVYTWGKGDYHRLGHGT-GEHVRRPKKVAALQGKKIISIATGSLHCVA 4181

Query: 119  VTEAGEVYTWG 129
             ++ GEV+TWG
Sbjct: 4182 CSDEGEVFTWG 4192


>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 395

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 168/425 (39%), Gaps = 101/425 (23%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSY----LTSGKHGETPEPFPLPTEASVVKAAAGWA 114
           G   +LA ++ GKL TWG        +     +  K   TP      +   +V+AA G  
Sbjct: 46  GSRNSLAIADDGKLFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGW 105

Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF--QKDSTGKQSALPTEQAPPSDKRA 172
           HC++V + G  Y WG  E          +G  G    +KD TG+                
Sbjct: 106 HCLAVDDQGRAYAWGGNE----------YGQCGEEPERKDGTGR---------------- 139

Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
                        R + E P         +P LV       + +VAAGG H+++L+  G 
Sbjct: 140 -----------PLRRDIEIPQR------CAPKLV-------VRQVAAGGTHSVVLTREGH 175

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           VW WG     Q      IK +  P  +  LE+                          V+
Sbjct: 176 VWTWG-----QPWPPGDIKQISVPVRVQGLEN--------------------------VR 204

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            IA G  H+  + + G L  +G   YGQ G G T  + +P     L D+ +  IAAG WH
Sbjct: 205 LIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWH 264

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           +  ++ EG VY +G  + G+LG G     +     +  +L  +    VSCG  HS  LT 
Sbjct: 265 STALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALTR 324

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN--------------IACGWWHT 458
           DG + S+G   +G+LG G  +    P  VPI    P++              +ACG  HT
Sbjct: 325 DGHMFSFGRGDHGRLGYGRKVTTGQPMEVPIDLPPPQDPSGTATEGHWIAKLVACGGRHT 384

Query: 459 LLLAE 463
           L + E
Sbjct: 385 LAIVE 389



 Score = 44.7 bits (104), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 8/108 (7%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +  +G  + GQLG G ++ +    L++   L+  R + V  G+R+S  + +DG++ +WGW
Sbjct: 7   IIAWGSGEDGQLGIGSNEEKEWVCLVKA--LQPHRIRSVVAGSRNSLAIADDGKLFTWGW 64

Query: 422 NKYGQLG-----LGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           N+   LG       ++   N PS V  +        A G WH L + +
Sbjct: 65  NQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDD 112


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 124/252 (49%), Gaps = 31/252 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +++  VA G  HT  L++ G V+ WG    GQLGLG  +   P P LI  L         
Sbjct: 877  LEVLYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGD-VYESPYPRLITSL--------- 925

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                               V  ++CG  H+  +T+ G +  +GWG++GQ G G+ +DQ  
Sbjct: 926  ---------------ANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRL 970

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE--- 388
            P   + L D  ++ IAAG  H++ +S +G+++ FG   FGQLGTG     +VP L++   
Sbjct: 971  PVCVNHLKDQVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGIS 1030

Query: 389  --TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
                ++ +     +SCG  HSA+LT  G V +WG +  GQLG G   +   P+ +  + F
Sbjct: 1031 EKIILIATGYFHSISCGCHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQINENTF 1090

Query: 447  LPRNIACGWWHT 458
                I+CG   T
Sbjct: 1091 KADCISCGCEFT 1102



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 40/243 (16%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
            GD + +  P L+T      +  ++ G  HTL L++ GQV+ WG+G  GQLGLG+    + 
Sbjct: 911  GDVYESPYPRLITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGN----ID 966

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
               L  C+ H    KD+                   +K+IA G  HS V++D G + +FG
Sbjct: 967  DQRLPVCVNHL---KDQ------------------VIKDIAAGHGHSLVLSDKGQIFSFG 1005

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV--------CISVEGRVYVFG 366
             G++GQ G G+T     P     + + ++  IA G +H++         ++V G VY +G
Sbjct: 1006 SGVFGQLGTGNTTKSSVPVLIQGISE-KIILIATGYFHSISCGCHHSALLTVSGGVYTWG 1064

Query: 367  GNQFGQLGTGVDQAENVPKLLETPILESK-RAKVVSCGARHSAVL-TEDGQVLSWGWNKY 424
             +  GQLG G  +    P    T I E+  +A  +SCG   +A    + G++  WG N  
Sbjct: 1065 RSLDGQLGNGGHKEVTAP----TQINENTFKADCISCGCEFTAAQEKQTGKIFCWGSNSV 1120

Query: 425  GQL 427
            GQ+
Sbjct: 1121 GQV 1123



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 14/129 (10%)

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI--LESKRAKV--VS 401
           +  G  HT  I   G +Y +G    G LG G   + +    L +PI  L   + +V  V+
Sbjct: 828 LNCGYGHTALIR-NGTIYTWGQTVKGCLGQGPTMSRHS---LPSPISLLNCFKLEVLYVA 883

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHT 458
           CG  H+  LT +G V +WG +KYGQLGLGD  +   P L+        N+   +CG +HT
Sbjct: 884 CGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLIT--SLANENVITLSCGQFHT 940

Query: 459 LLLAETTQI 467
           L L E  Q+
Sbjct: 941 LALTEKGQV 949


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 101/176 (57%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACG +H+A+VT  G + ++G  L G+ GHG  +D   P +   L +  VE +A G 
Sbjct: 307 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGE 366

Query: 351 WHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +H+  +++ G +Y++GGN   FG LG G +  + VP+ L+ P LE      VSCG  H+A
Sbjct: 367 YHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGP-LEGIHVSSVSCGPWHTA 425

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           V+T  GQ+ ++G   +G LG GD I  +IP  V  + G      ACG WHT  + E
Sbjct: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVWHTAAVVE 481



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 42/258 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ V+ G  HT +++  GQ++ +G G  G LG G RI  V  P  +  L+   + + 
Sbjct: 411 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSIPREVESLKGLRTMR- 468

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD------------AGALLTFGWGLY 318
                                   ACG  H+A V +            +G L T+G G  
Sbjct: 469 -----------------------AACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDK 505

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            + GHG    +L P+  ++L++    Q+A G   T  ++  G+VY  G   +GQLG    
Sbjct: 506 CRLGHGDKEARLVPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSPVYGQLGN--P 563

Query: 379 QAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           QA+  +P  +E  ++++   + ++CGA H AVLT   +V +WG    G+LG GD+ DRN 
Sbjct: 564 QADGMLPTRVEGKLMKN-FVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDADDRNS 622

Query: 438 PSLV-PIHGFLPRNIACG 454
           PS+V  +     + I CG
Sbjct: 623 PSVVEALKDKQVKGIVCG 640



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 133/302 (44%), Gaps = 51/302 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-----SRIKMVP-----TPHLIPC 261
           + +  +A G +H  +++  G+V+ WG    G+LG G     S  K V         L+ C
Sbjct: 305 LDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVAC 364

Query: 262 LEH--AASGKDRPLLVRQGSVNSSGKAG----------RS--------YVKEIACGGRHS 301
            E+   A      L +  G+  + G  G          R         +V  ++CG  H+
Sbjct: 365 GEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGIHVSSVSCGPWHT 424

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI----- 356
           AVVT AG L TFG G +G  GHG       P    SL  ++  + A G+WHT  +     
Sbjct: 425 AVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVWHTAAVVEIMV 484

Query: 357 -------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
                     G+++ +G     +LG G  +A  VP  + T ++E    + V+CG   +A 
Sbjct: 485 GSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVAT-LVEPNFCQ-VACGHSLTAA 542

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN----IACGWWHTLLLAETT 465
           LT  GQV + G   YGQLG     D  +P+ V   G L +N    +ACG +H  +L   T
Sbjct: 543 LTTTGQVYTMGSPVYGQLG-NPQADGMLPTRV--EGKLMKNFVEELACGAYHVAVLTSRT 599

Query: 466 QI 467
           ++
Sbjct: 600 EV 601



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 6/150 (4%)

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           G G   D   P    S + + V+ IA G  H   ++ +G V+ +G    G+LG GVD   
Sbjct: 286 GSGVQMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDV 345

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPS 439
           + PK ++   L++   ++V+CG  HS  +T  G +  WG N Y  G LG G    + +P 
Sbjct: 346 SHPKFVDG--LKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPR 403

Query: 440 LV--PIHGFLPRNIACGWWHTLLLAETTQI 467
            +  P+ G    +++CG WHT ++    Q+
Sbjct: 404 KLDGPLEGIHVSSVSCGPWHTAVVTSAGQL 433



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 68/162 (41%), Gaps = 25/162 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T  L+  GQV+  G    GQLG      M+P
Sbjct: 511 GDKEARLVPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQADGMLP 570

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           T                            GK  +++V+E+ACG  H AV+T    + T+G
Sbjct: 571 T-------------------------RVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWG 605

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  G+ GHG  +D+  PS   +L D QV+ I  G   T  I
Sbjct: 606 KGANGRLGHGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAI 647



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 41/229 (17%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEG 242
           GD      P  V    G++  + A G  HT  + ++            G+++ WG G + 
Sbjct: 447 GDRISVSIPREVESLKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKC 506

Query: 243 QLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           +LG G +  ++VPT     C+           LV                 ++ACG   +
Sbjct: 507 RLGHGDKEARLVPT-----CV---------ATLVEPNFC------------QVACGHSLT 540

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           A +T  G + T G  +YGQ G+   +  L       LM   VE++A G +H   ++    
Sbjct: 541 AALTTTGQVYTMGSPVYGQLGNPQADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRTE 600

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           VY +G    G+LG G     N P ++E   L+ K+ K + CG   +A +
Sbjct: 601 VYTWGKGANGRLGHGDADDRNSPSVVEA--LKDKQVKGIVCGTSFTAAI 647


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 137/305 (44%), Gaps = 77/305 (25%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V +GGRH+L L+  G+V+ WG G +G+LG  SR                    D+
Sbjct: 3552 IKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNC-----------------DK 3594

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K+ R  V++IACG  HSA +T  G L T+G G YG+ GHG    QL+
Sbjct: 3595 PRLIE------ALKSKR--VRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQLK 3646

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP----K 385
            P    +L   +V Q+A G     T+ ++ EG+VY +G   FG+LG G  +  NVP    +
Sbjct: 3647 PKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNVPHEVDR 3706

Query: 386  LLETPI----------------------------------------------LESKRAKV 399
            L +  +                                              L+ K+   
Sbjct: 3707 LRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVH 3766

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTL 459
            V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV + G+    +ACG  H++
Sbjct: 3767 VAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALVVLEGYKISKVACGSSHSI 3826

Query: 460  LLAET 464
              A T
Sbjct: 3827 AWATT 3831



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 124/262 (47%), Gaps = 34/262 (12%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L+T   G ++ K+  G  +++ L+  G+V+ WG G  G+LG GS              
Sbjct: 662 PALITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGS-------------- 707

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLTFGWGLYGQ 320
              +  +  P+L++        K  R  + ++ACG     +  VTD+GA+ ++G G YG+
Sbjct: 708 ---SEDQTTPMLLK------FFKGHR--IVDVACGSGDAQTLAVTDSGAVYSWGDGDYGK 756

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            G G  +    P     LM   V ++  G   ++ ++  G VY +G     +LG G +  
Sbjct: 757 LGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDH 816

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
              PK +E   L SK+ K ++ G+ H   +TEDG++  WG N+ GQLG     +   P+L
Sbjct: 817 ARHPKQIEA--LSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTEPTL 874

Query: 441 VPIHGFLPRNI---ACGWWHTL 459
             I G   +NI   ACG   T 
Sbjct: 875 --IGGMEGKNIIGVACGPTQTF 894



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 30/269 (11%)

Query: 205  LVTLNP---GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
            L TLN     ++  ++  G +    ++  G+V+  G    G+LGLG     V  P  I  
Sbjct: 3487 LPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITS 3546

Query: 262  LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
            L           ++++ +V+S              GGRHS  +T  G + ++G G  G+ 
Sbjct: 3547 LSQ--------YVIKKVAVHS--------------GGRHSLALTTDGKVFSWGEGDDGKL 3584

Query: 322  GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            GH S  +  +P    +L   +V  IA G  H+  I+  G +Y +G  ++G+LG G +  +
Sbjct: 3585 GHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQ 3644

Query: 382  NVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
              PK  +   L  +R   V+CG+R   +  LT++G+V SWG   +G+LG G S   N+P 
Sbjct: 3645 LKPK--QVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNVPH 3702

Query: 440  LVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             V  +       I CG   +L L ++ Q+
Sbjct: 3703 EVDRLRDQKVCQIECGAQFSLALTKSGQV 3731



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 53/284 (18%)

Query: 202  SPC----LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
            SPC    ++    G ++  +AAGG H+  ++  G+++ WG G  G+LG G      P P 
Sbjct: 4586 SPCDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGDSEDQ-PRPK 4644

Query: 258  LIPCL------EHAASGKDRPLLVRQGSVN-------SSGKAGR---------------- 288
            L+  L      + A    D   L      N         GK GR                
Sbjct: 4645 LVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQ 4704

Query: 289  -SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
               V ++ CG + S  +T +G++ T+G G Y + GHGS +   RP   S+L + +V  +A
Sbjct: 4705 GQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVA 4764

Query: 348  AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
             G  H V  +  G V+ +G N  GQLG G   A   P+L+ +  L  K+   V+CG+ HS
Sbjct: 4765 CGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQRPRLVAS--LLGKKINRVACGSAHS 4822

Query: 408  AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
                     L+W  NK    G        +PS +P+     +NI
Sbjct: 4823 ---------LAWSTNKAVSAG-------KLPSDIPMEYNHLQNI 4850



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 133/347 (38%), Gaps = 87/347 (25%)

Query: 63   ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            +LA +  GK+ +WG  DD G+    S  + + P          V   A G +H  ++T  
Sbjct: 3564 SLALTTDGKVFSWGEGDD-GKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSN 3622

Query: 123  GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
            G++YTWG  E          +G  G    D+T       T+  P   K    E       
Sbjct: 3623 GDLYTWGLGE----------YGRLG--HGDNT-------TQLKPKQVKALAHE------- 3656

Query: 183  SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGG 240
                                          ++ +VA G R   TL L+D G+V+ WG G 
Sbjct: 3657 ------------------------------RVVQVACGSRDAQTLALTDEGKVYSWGDGD 3686

Query: 241  EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
             G+LG G   +    PH +  L                            V +I CG + 
Sbjct: 3687 FGKLGRGGS-EGCNVPHEVDRLRDQK------------------------VCQIECGAQF 3721

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
            S  +T +G + T+G G Y + GHG+     +P     L   ++  +A G  H + ++  G
Sbjct: 3722 SLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSG 3781

Query: 361  RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            +V+ +G N  GQ G G       P L+   +LE  +   V+CG+ HS
Sbjct: 3782 QVFAWGDNDHGQQGNGTTTVNRKPALV---VLEGYKISKVACGSSHS 3825



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 5/170 (2%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           G+H   +T  G + ++G G  G+ GHG   +   P+  + L   QV +I  G  ++V ++
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALT 687

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL--TEDGQ 415
             G VY +G   FG+LG G  + +  P LL+    +  R   V+CG+  +  L  T+ G 
Sbjct: 688 SNGEVYSWGKGNFGRLGHGSSEDQTTPMLLK--FFKGHRIVDVACGSGDAQTLAVTDSGA 745

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           V SWG   YG+LG G +     P ++  + G     + CG   ++ L ++
Sbjct: 746 VYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKS 795



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 45  RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
           +L G D  +  CG    F++A ++SG + TWG  D+    + T   H   P+     +  
Sbjct: 773 KLMGQDVVRVYCGNQ--FSMALTKSGAVYTWGKGDNYRLGHGTE-DHARHPKQIEALSSK 829

Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
            V   A G  HC+++TE GE+Y WG  E
Sbjct: 830 KVKDIAIGSLHCMAITEDGELYGWGRNE 857



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV+
Sbjct: 4714 GSQFSVALTKSGSVYTWGKGDYHRLGH-GSDDHVRRPRKVSALQNKKVIDVACGSLHCVA 4772

Query: 119  VTEAGEVYTWG 129
             T+ GEV++WG
Sbjct: 4773 CTDTGEVFSWG 4783



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 11/83 (13%)

Query: 53   KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASV 106
            + VC   CG  F+LA ++SG++ TWG  D     Y   G     H   P+         +
Sbjct: 3710 QKVCQIECGAQFSLALTKSGQVWTWGKGD-----YFRLGHGTDAHVRKPQIVEGLKGKKI 3764

Query: 107  VKAAAGWAHCVSVTEAGEVYTWG 129
            V  A G  HC++VT++G+V+ WG
Sbjct: 3765 VHVAVGALHCLAVTDSGQVFAWG 3787



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 75/211 (35%), Gaps = 66/211 (31%)

Query: 56   CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
            CG G    L  ++   + +WG  D     Y   G+ G      P+  E      V+K   
Sbjct: 4659 CGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKVPMKIETLQGQGVMKVEC 4713

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G    V++T++G VYTWG                 G + +   G                
Sbjct: 4714 GSQFSVALTKSGSVYTWG----------------KGDYHRLGHG---------------- 4741

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
            + + V + RK S+ + +                        K+  VA G  H +  +D G
Sbjct: 4742 SDDHVRRPRKVSALQNK------------------------KVIDVACGSLHCVACTDTG 4777

Query: 232  QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            +V+ WG   EGQLG G+    +  P L+  L
Sbjct: 4778 EVFSWGDNDEGQLGDGT-TNAIQRPRLVASL 4807



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)

Query: 40  SPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
           +P+  +   G    DV CG G    LA ++SG + +WG  D     Y   G+ G    +T
Sbjct: 713 TPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGD-----YGKLGRGGNDGCKT 767

Query: 95  PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           P+         VV+   G    +++T++G VYTWG
Sbjct: 768 PKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWG 802



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 82/207 (39%), Gaps = 37/207 (17%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGW- 113
            G   + A + +G L TWG  +     Y   G    T +  P   +A     VV+ A G  
Sbjct: 3612 GSSHSAAITSNGDLYTWGLGE-----YGRLGHGDNTTQLKPKQVKALAHERVVQVACGSR 3666

Query: 114  -AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
             A  +++T+ G+VY+WG            DFG  G    +       +P E     D++ 
Sbjct: 3667 DAQTLALTDEGKVYSWG----------DGDFGKLGRGGSEGCN----VPHEVDRLRDQKV 3712

Query: 173  GEEVVKRRKTSSAREESENP---ASGDEF--------FTLSPCLVTLNPGVKITKVAAGG 221
             + +    + S A  +S        GD F            P +V    G KI  VA G 
Sbjct: 3713 CQ-IECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGA 3771

Query: 222  RHTLILSDMGQVWGWGYGGEGQLGLGS 248
             H L ++D GQV+ WG    GQ G G+
Sbjct: 3772 LHCLAVTDSGQVFAWGDNDHGQQGNGT 3798


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 135/260 (51%), Gaps = 32/260 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V +GG+H + L+  G+V+ WG G +G+LG G+R+ +                 D+
Sbjct: 2142 IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNL-----------------DK 2184

Query: 272  PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
            P ++         +A RS  +++IACG  HSA +T +G L T+G G YG+ GHG    QL
Sbjct: 2185 PKMI---------EALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQL 2235

Query: 331  RPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            +P    SL+  ++ Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+P  +E
Sbjct: 2236 KPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIE 2295

Query: 389  TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
               L +     + CGA+ S  LT+ G+V +WG   Y +LG G       P+++  +    
Sbjct: 2296 R--LNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKK 2353

Query: 448  PRNIACGWWHTLLLAETTQI 467
              ++A G  H L + +T Q+
Sbjct: 2354 VIHVAVGALHCLAVTDTGQV 2373



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/235 (34%), Positives = 116/235 (49%), Gaps = 31/235 (13%)

Query: 200  TLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
             L P L+     V I K+A  +GG+H L LS    V+ WG G +G+LG G+R+    TP 
Sbjct: 3104 VLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETPK 3162

Query: 258  LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
            LI  L+                           + +IACGG HSA +T  G L T+G G 
Sbjct: 3163 LIEALQGYE------------------------IIDIACGGAHSAAITSTGQLYTWGKGR 3198

Query: 318  YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
            YG+ GHG + DQL+P     L+  +V  +A  +G   T+CI+ +  V+ +G   +G+LG 
Sbjct: 3199 YGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGR 3258

Query: 376  GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G      VPK +E+  L       V CG++ S  LT  G V +WG   Y +LG G
Sbjct: 3259 GGSDGCKVPKKIES--LAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 3311



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 166/416 (39%), Gaps = 63/416 (15%)

Query: 22   VYMWGY-----LPGT--SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
            V++WG      L G   S  K P+ S   ++L     W     GG       S  GKL  
Sbjct: 2057 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQL-----WPIHIAGGSKSLFIVSHEGKLYA 2111

Query: 75   WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTWGWRE 132
             G   + G+  L    +   P P P  ++  + K A  +G  H +++T  G+V++WG  E
Sbjct: 2112 CGEGTN-GRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE 2170

Query: 133  CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE----- 187
                       G       D      AL +++    D   G         +S+ E     
Sbjct: 2171 -------DGKLGHGNRLNLDKPKMIEALRSKKI--RDIACGSS--HSAAITSSGELYTWG 2219

Query: 188  --ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQ 243
              E      GD    L P L+    G +I +VA G R   TL L+D G V+ WG G  G+
Sbjct: 2220 LGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGK 2279

Query: 244  LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
            LG G   +    PH I  L                            V +I CG + S  
Sbjct: 2280 LGRGGS-EGCNIPHNIERLNALE------------------------VVQIECGAQFSLA 2314

Query: 304  VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
            +T  G + T+G G Y + GHGS     +P+   SL D +V  +A G  H + ++  G+VY
Sbjct: 2315 LTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVY 2374

Query: 364  VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT-EDGQVLS 418
             +G N  GQ G G       P L+    LE      V+CG+ HS   T +D QV+S
Sbjct: 2375 AWGDNDHGQQGNGTTIVNRKPALVHG--LEDVHINRVACGSSHSIAWTLQDTQVVS 2428



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 28/254 (11%)

Query: 217  VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
            +A G +   I+S  G+++  G G  G+LGLG     VP P  IP L           +++
Sbjct: 2093 IAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHS-NNVPYPRPIPFLSQ--------YVIK 2143

Query: 277  QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
            + +V+S              GG+H+  +T  G + ++G G  G+ GHG+  +  +P    
Sbjct: 2144 KVAVHS--------------GGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIE 2189

Query: 337  SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
            +L   ++  IA G  H+  I+  G +Y +G  ++G+LG G +  +  PKL+++  L   R
Sbjct: 2190 ALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKS--LVGHR 2247

Query: 397  AKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIAC 453
               V+CG+R   +  LT++G V SWG   +G+LG G S   NIP ++  ++      I C
Sbjct: 2248 IVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIEC 2307

Query: 454  GWWHTLLLAETTQI 467
            G   +L L +T ++
Sbjct: 2308 GAQFSLALTKTGEV 2321



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 96/215 (44%), Gaps = 29/215 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L P L+    G K+  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 3205 GDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS-DG 3263

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
               P  I  L                       AG   +K + CG + S  +T +G++ T
Sbjct: 3264 CKVPKKIESL-----------------------AGLGVIK-VECGSQFSVALTRSGSVYT 3299

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHG+     RP   ++L   ++  IA G  H V  S EG V+ +G N  GQ
Sbjct: 3300 WGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQ 3359

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            LG     A   P+L+    L+ K+   V+CG+ H+
Sbjct: 3360 LGDDTTNAIQRPRLVSA--LQGKKITNVACGSAHT 3392



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 114/229 (49%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G ++GWG+   GQLG   G+++K +PT    PC    A    RP+               
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVK-IPT----PC---EALSTLRPV--------------- 3067

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                ++  G +    VT  G +   G+G  G+ G G T+  L P+   S+  + +++IA 
Sbjct: 3068 ----QLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAV 3123

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + +S +  VY +G    G+LG G   A   PKL+E   L+      ++CG  H
Sbjct: 3124 NSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEA--LQGYEIIDIACGGAH 3181

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA +T  GQ+ +WG  +YG+LG GDS D+  P L+  + G+   ++ACG
Sbjct: 3182 SAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACG 3230



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 7/152 (4%)

Query: 312  TFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
             F WGL    Q G    +    P  +  L  +    IA G      +S EG++Y  G   
Sbjct: 2057 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGT 2116

Query: 370  FGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQL 427
             G+LG G   + NVP     P L     K V+   G +H+  LT DG+V SWG  + G+L
Sbjct: 2117 NGRLGLG--HSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 2174

Query: 428  GLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            G G+ ++ + P ++  +     R+IACG  H+
Sbjct: 2175 GHGNRLNLDKPKMIEALRSKKIRDIACGSSHS 2206



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 3/158 (1%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G+VY  G    
Sbjct: 3034 YGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGYGAG 3093

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G   +  VP LLE+      +   V+ G +H   L+ D  V SWG    G+LG G
Sbjct: 3094 GRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHG 3153

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            + +    P L+  + G+   +IACG  H+  +  T Q+
Sbjct: 3154 NRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQL 3191



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A + SG + TWG  D     + T G+H   P+         ++  A G  HCV+
Sbjct: 3284 GSQFSVALTRSGSVYTWGKGDYHRLGHGT-GEHVRRPKKVAALQGKKIISIATGSLHCVA 3342

Query: 119  VTEAGEVYTWG 129
             ++ GEV+TWG
Sbjct: 3343 CSDEGEVFTWG 3353


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu
           rubripes]
          Length = 4822

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P L+      KI K+AA   G+H L LS  G+V+ WG G  G+LG G          
Sbjct: 467 TLAPMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD--------- 517

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
                   A+  + P ++       +GK    +V  IACG  +SAV+T  G L T+G G 
Sbjct: 518 --------ATYLEEPTMI----AAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGN 565

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ DQ  P   ++L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 566 YGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 625

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV +WG     +LG G     
Sbjct: 626 GGSDGCKTPKLVEK--LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHV 683

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L +  ++
Sbjct: 684 RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEV 716



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 134/290 (46%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------ 264
             + + +VA G +    ++  G+++  G    G+LGLG     +P P  I  L +      
Sbjct: 2977 ALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKV 3036

Query: 265  --AASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 3037 AVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3096

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L ++G G YG+ GHG    QLRP     L+  +V Q+A G     T+ ++ 
Sbjct: 3097 SAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD 3156

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3157 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3214

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + +T Q+
Sbjct: 3215 WGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQV 3264



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 133/306 (43%), Gaps = 82/306 (26%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH + L+  G+V+ WG G +G+LG  SR+                  
Sbjct: 3030 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3073

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L ++G G YG+ GHG    
Sbjct: 3074 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNAT 3124

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--- 383
            QLRP     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+   
Sbjct: 3125 QLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3184

Query: 384  -------------------------------------------------PKLLETPILES 394
                                                             P+++E   L  
Sbjct: 3185 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG--LRG 3242

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
            K+   V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +AC
Sbjct: 3243 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3302

Query: 454  GWWHTL 459
            G  H++
Sbjct: 3303 GSSHSV 3308



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4015 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4074

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   +  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4075 SLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4134

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4135 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGS 4194

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4195 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4252

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4253 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4302



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 144/356 (40%), Gaps = 83/356 (23%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG  E                      G  +  P ++  
Sbjct: 4030 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGNRSPCDRPR 4071

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
              +   G EVV     ++    S    +  E FT                 L P LV   
Sbjct: 4072 VIESLRGVEVVD---IAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDAL 4128

Query: 210  PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
             G ++  VA  +G   TL L+D   VW WG G  G+LG G                  + 
Sbjct: 4129 QGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-----------------GSD 4171

Query: 268  GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
            G   P+      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +
Sbjct: 4172 GCKIPM-----KIDSLTGLG---VTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4223

Query: 328  DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
               RP     L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+
Sbjct: 4224 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4283

Query: 388  ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
                L+ K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4284 AA--LQGKKINRVACGSAHT---------LAWSTSKPTNAG-------KLPAQVPM 4321



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 2984 AGGSKSLFAVTVEGKIYACGEA--------TNGRLGLGLSSGTIPIPRQITALSNYVVKK 3035

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H +++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3036 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3085

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P LV +  G ++ +VA G
Sbjct: 3086 RIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACG 3145

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3146 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3187

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHG+     +P     L
Sbjct: 3188 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGL 3240

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3241 RGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3298

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3299 RVACGSSHSVAWT 3311



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 159/360 (44%), Gaps = 62/360 (17%)

Query: 149  FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--ASGDEF-FTLSPCL 205
            F++  T  + A+  +Q     +   EEV K+ +   A  ES N    S D F       L
Sbjct: 3862 FRRYCTASRVAIALDQRTSLPRPFLEEVTKKIRELMADHESMNSLHESHDLFKREHDEQL 3921

Query: 206  VT-LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCL 262
            V  +N       ++AGG         G ++GWG+   GQLG   G+++K VPTP      
Sbjct: 3922 VQWMNRRPDDWTLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVK-VPTPT----- 3967

Query: 263  EHAASGKDRPLLVRQG-----SVNSSGK----------------------------AGRS 289
               A    RP+ +  G     +V + GK                                
Sbjct: 3968 --EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHV 4025

Query: 290  YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
            +++++A   GG+H   ++  G + ++G    G+ GHG+ +   RP    SL  ++V  IA
Sbjct: 4026 FIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIA 4085

Query: 348  AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
            AG  H+ CI+  G ++ +G  ++G+LG G  + +  PKL++   L+  R   V+CG+   
Sbjct: 4086 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA--LQGHRVIDVACGSGDA 4143

Query: 406  HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
             +  LT+D  V SWG   YG+LG G S    IP  +  + G     + CG   ++ L ++
Sbjct: 4144 QTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKS 4203



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2946 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2979

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G +   G    G+ G G ++  +  P   ++L +  V+++A 
Sbjct: 2980 -VVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAV 3038

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3039 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3096

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA +T  G++ SWG  +YG+LG GD+  +  P LV +  G     +ACG      LA T 
Sbjct: 3097 SAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD 3156

Query: 466  Q 466
            +
Sbjct: 3157 E 3157



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 133/326 (40%), Gaps = 66/326 (20%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAA--GWAHCVSV 119
           +  SE G LI   S     Q+Y ++     T  P  + + +S  +VK AA     H +++
Sbjct: 442 IVCSEKGFLILSSSGAVYTQNYKST-----TLAPMLIHSLSSRKIVKLAAHPDGQHYLAL 496

Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           +  GEV++WG   C          G  G     D+T  +   PT  A  + K+AG+ VV 
Sbjct: 497 SSNGEVFSWG---C----------GDGGRLGHGDATYLEE--PTMIAAFNGKQAGKHVVH 541

Query: 179 RR--KTSSA------------REESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGR 222
                T SA            R        G      +P LVT   G+K+  VA  +G  
Sbjct: 542 IACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDA 601

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            TL +++ GQVW WG G  G+LG G                  + G   P LV       
Sbjct: 602 QTLAVTENGQVWSWGDGDYGKLGRG-----------------GSDGCKTPKLVE------ 638

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
             K     + ++ CG + S  +T  G + T+G G   + GHG+      P    +L   +
Sbjct: 639 --KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKK 696

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGN 368
           V  +A G  H + ++ +G V+ +G N
Sbjct: 697 VVDVAVGSTHCLALTDDGEVHSWGSN 722



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4193 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4251

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4252 CTEDGEVYTWG 4262



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
           CG G    LA +E+G++ +WG  D     Y   G+ G    +TP+      +  +VK   
Sbjct: 596 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 650

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G    V++T+ G+VYTWG
Sbjct: 651 GSQFSVALTKDGQVYTWG 668


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 32/260 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V +GGRH + L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3002 IKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3044

Query: 272  PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
            P L+         +A RS  V++IACGG HSA +   G L T+G G YG+ GHG    QL
Sbjct: 3045 PRLI---------EALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQL 3095

Query: 331  RPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            RP    +L   +V Q+A G     T+ ++  G VY +G   FG+LG G  +  +VP  +E
Sbjct: 3096 RPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIE 3155

Query: 389  TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
               L       + CGA+ S  LT+ GQV +WG   Y +LG G       P LV  + G  
Sbjct: 3156 R--LNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQLVETLKGKK 3213

Query: 448  PRNIACGWWHTLLLAETTQI 467
              ++A G  H L + +  Q+
Sbjct: 3214 VTHVAVGALHCLSVLDNGQV 3233



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 129/262 (49%), Gaps = 34/262 (12%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            +P L+     V I KVA  +GG+H L LS  G+V+ WG G +G+LG G+R          
Sbjct: 4011 TPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNR---------S 4061

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            PC        DRP  +     +  GK     V +IA GG HSA +T  G L ++G G YG
Sbjct: 4062 PC--------DRPRAIE----SLRGKE----VVDIAAGGAHSACITSTGELYSWGKGRYG 4105

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
            + GHG + DQ +P    +L   +V  +A  +G   T+CI+ +  V+ +G   +G+LG G 
Sbjct: 4106 RLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGG 4165

Query: 378  DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG--DSIDR 435
                 VP  ++   L+      V CG++ S  LT+ G V +WG   Y +LG G  D I R
Sbjct: 4166 SDGCKVP--MKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHI-R 4222

Query: 436  NIPSLVPIHGFLPRNIACGWWH 457
                   + G    +IACG  H
Sbjct: 4223 RPRRCTTLQGKKIVSIACGSLH 4244



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 39/246 (15%)

Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGL 246
           S  P S  E  TL+         ++I K+AA   G H L L+  G V+ WG G  G+LG 
Sbjct: 461 SAEPQSMHEISTLA--------DIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGH 512

Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
           G  +                   D P+L+ +         G+S V  +ACG  HSA +T 
Sbjct: 513 GDTVTC-----------------DSPMLINE-------LHGKSVVN-VACGSHHSAAITA 547

Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYV 364
           +G L T+G G +G+ G GST D L P+  S L+ + V  +A  +G   T+ ++  G VY 
Sbjct: 548 SGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYS 607

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G  ++G+LG G  +    PKL++   L+      V CG ++SA + ++G V +WG  + 
Sbjct: 608 WGDGEYGKLGRGGSEGCKAPKLVDK--LQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEG 665

Query: 425 GQLGLG 430
            +LG G
Sbjct: 666 YKLGHG 671



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 137/333 (41%), Gaps = 70/333 (21%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG                 G   K   G +S  P ++  
Sbjct: 4026 VAINSGGKHCLALSAEGEVYSWG----------------EGEDGKLGHGNRS--PCDRPR 4067

Query: 167  PSDKRAGEEVVKRRK--------TSSAREES------ENPASGDEFFTLSPCLVTLNPGV 212
              +   G+EVV            TS+    S           GD      P LV    G 
Sbjct: 4068 AIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGY 4127

Query: 213  KITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
            ++T VA  +G   TL ++D   VW WG G  G+LG G                  + G  
Sbjct: 4128 RVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRG-----------------GSDGCK 4170

Query: 271  RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
             P+ +           G   +K + CG + S  +T +GA+ T+G G Y + GHG+ +   
Sbjct: 4171 VPMKI-------DALQGLGVIK-VECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIR 4222

Query: 331  RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            RP   ++L   ++  IA G  H V  +  G VY +G N  GQLG G   A   P+L+   
Sbjct: 4223 RPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA- 4281

Query: 391  ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
             L+ K+   V+CG+ HS         L+W  NK
Sbjct: 4282 -LQGKKINRVACGSAHS---------LAWSTNK 4304



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 163/407 (40%), Gaps = 112/407 (27%)

Query: 118  SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
            S+T   E + W W                  F++ ST  + A+  E          EEVV
Sbjct: 3845 SLTSCSEAHKWSW------------------FRRYSTAARVAMALENRTALPTSFCEEVV 3886

Query: 178  KRRKTSSA------REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
            K+ +  SA      RE   + + G E       L+ LN       ++ GG         G
Sbjct: 3887 KKIQEISAEEEKLTREHESHTSFGRE--QDEQLLLWLNRRPDDWTLSWGGS--------G 3936

Query: 232  QVWGWGYGGEGQLG--LGSRIKM------------------------------------- 252
            Q+WGWG+   GQLG   G+++K+                                     
Sbjct: 3937 QIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGDGKVCATGYG 3996

Query: 253  ------------VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
                        V TP LI  ++H        + +R+ ++NS              GG+H
Sbjct: 3997 AGGRLGIGGTDSVATPTLIESIQH--------VFIRKVAINS--------------GGKH 4034

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
               ++  G + ++G G  G+ GHG+ +   RP    SL   +V  IAAG  H+ CI+  G
Sbjct: 4035 CLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTG 4094

Query: 361  RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLS 418
             +Y +G  ++G+LG G  + +  PKL++   L+  R   V+CG+    +  +T+D  V S
Sbjct: 4095 ELYSWGKGRYGRLGHGDSEDQTKPKLVDA--LKGYRVTDVACGSGDAQTLCITDDDSVWS 4152

Query: 419  WGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            WG   YG+LG G S    +P  +  + G     + CG   ++ L ++
Sbjct: 4153 WGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKS 4199



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 147/366 (40%), Gaps = 59/366 (16%)

Query: 58   GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---GW 113
            GG       ++ GKL   G A +       S   G  P+P  L + +  V+K  A   G 
Sbjct: 2954 GGSKSLFCVTQDGKLFACGEATNGRLGLGISA--GNVPQPRQLTSLSQYVIKKVAVHSGG 3011

Query: 114  AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
             H +++T  G+V++WG            D G  G F + +  K   +   ++    KR  
Sbjct: 3012 RHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALRS----KRVR 3057

Query: 174  EEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR- 222
            +       +++     +              GD    L P LV    G ++ +VA G R 
Sbjct: 3058 DIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRD 3117

Query: 223  -HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
              TL L+D G V+ WG G  G+LG G   +    PH I  L                  N
Sbjct: 3118 AQTLALTDSGTVYSWGDGDFGKLGRGGS-EGCSVPHPIERL------------------N 3158

Query: 282  SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
              G      V +I CG + S  +T +G + T+G G Y + GHG+     +P    +L   
Sbjct: 3159 GVG------VCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQLVETLKGK 3212

Query: 342  QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            +V  +A G  H + +   G+VY +G N  GQ G         P L++   LE  +   V+
Sbjct: 3213 KVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRKPALVQG--LEGCKISRVA 3270

Query: 402  CGARHS 407
            CG+ HS
Sbjct: 3271 CGSSHS 3276



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 11/179 (6%)

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQ 342
            +A +   K++ CG     + T       F WGL    Q G    +    P    +L  ++
Sbjct: 2894 RASQVMAKKVKCGSGVKDIQTQ-----VFVWGLNDKDQLGGPKGSKIKTPGINETLSTLK 2948

Query: 343  VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
              QI  G     C++ +G+++  G    G+LG G+  A NVP+  +   L     K V+ 
Sbjct: 2949 CVQIVGGSKSLFCVTQDGKLFACGEATNGRLGLGI-SAGNVPQPRQLTSLSQYVIKKVAV 3007

Query: 403  --GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
              G RH+  LT DG+V SWG    G+LG    ++ + P L+  +     R+IACG  H+
Sbjct: 3008 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHS 3066



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 145/382 (37%), Gaps = 92/382 (24%)

Query: 11  NEKMEECKETVVYMWGYLPGTSP--EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
            E  + C    ++ WG+L  +      +P   P+P  L       D+    C      S 
Sbjct: 396 QEAHKVCGAQELFAWGWLSTSDATCHNTPTTIPLPNDL------DDIIQVAC------SS 443

Query: 69  SGKLITWGSADDEGQSY-LTSGKHGETPEPFPLPTEASVVKAAAGW--AHCVSVTEAGEV 125
           +  LI   +    G+ Y +T+    ++        +  ++K AA    +HC+++T  G+V
Sbjct: 444 NSLLILLRT----GRVYKMTNSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALTSEGDV 499

Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
           Y+WG            DFG  G    D+    S +   +        G+ VV     +  
Sbjct: 500 YSWG----------NGDFGKLG--HGDTVTCDSPMLINEL------HGKSVVN---VACG 538

Query: 186 REESENPASGDEFFT-----------------LSPCLVTLNPGVKITKVA--AGGRHTLI 226
              S    +  E FT                 L+P LV+   GV +  VA  +G   T+ 
Sbjct: 539 SHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIA 598

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPLLV-RQGSV 280
           L+D G V+ WG G  G+LG G   +    P L+  L+         G      V + G+V
Sbjct: 599 LADTGSVYSWGDGEYGKLGRGGS-EGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAV 657

Query: 281 NSSGK-----------------------AGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
            + G                        AG+ +V  ++ G  H    T+ G LL++G   
Sbjct: 658 FTWGNGEGYKLGHGTEEHVRFPRQVETLAGK-HVTSLSLGSHHCLATTEEGELLSWGRND 716

Query: 318 YGQCGHGSTNDQLRPSYASSLM 339
            GQ G G T  +  P++A+SL+
Sbjct: 717 KGQLGEGHTGLKAEPAFAASLL 738



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 11/81 (13%)

Query: 55   VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
            VC   CG  F+LA ++SG++ TWG  D     Y   G     H   P+         V  
Sbjct: 3162 VCQIECGAQFSLALTKSGQVWTWGKGD-----YFRLGHGTDAHVRKPQLVETLKGKKVTH 3216

Query: 109  AAAGWAHCVSVTEAGEVYTWG 129
             A G  HC+SV + G+VY WG
Sbjct: 3217 VAVGALHCLSVLDNGQVYAWG 3237


>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 396

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 165/424 (38%), Gaps = 99/424 (23%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           GG   +LA  + GKL TWG        +    K   TP          +V+AA G  HC+
Sbjct: 45  GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCL 104

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +V + G  Y WG  E          +G  G    KD TG+    P  +     KR     
Sbjct: 105 AVDDQGRAYAWGGNE----------YGQCGEEPSKDETGR----PVRRDIVIPKRCA--- 147

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
                                            P + + +VAAGG H+++L+  G VW W
Sbjct: 148 ---------------------------------PQLTVRQVAAGGTHSVVLTREGYVWTW 174

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
                GQ      IK +  P  +  LE+                          V+ IA 
Sbjct: 175 -----GQPWPPGDIKQISIPVRVQGLEN--------------------------VRLIAV 203

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G  H+  + + G L  +G   YGQ G G T  +  P     L D+ +  IAAG WH+  +
Sbjct: 204 GAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTAL 263

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + EG VY +G  + G+LG G +   +     +  +L  +    VSCG  HS  LT DG++
Sbjct: 264 TNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRI 323

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVPIH-----------------GFLPRNIACGWWHTL 459
            S+G   +G+LG G  +    P  +PI                   ++ +++ACG  HTL
Sbjct: 324 FSFGRGDHGRLGYGRKVTTGQPLELPIDIPPLEGRFNHTDEEDDGKWIAKHVACGGRHTL 383

Query: 460 LLAE 463
            + E
Sbjct: 384 AIVE 387



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 45/282 (15%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L+  +  L P   +  V  G R++L + D G+++ WG+   G LG     K   T
Sbjct: 23  DEEKELASVVEALEP-FNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTEST 81

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
           P L+  L   AS K                     + + A GG H   V D G    +G 
Sbjct: 82  PSLVKSL---ASVK---------------------IVQAAIGGWHCLAVDDQGRAYAWGG 117

Query: 316 GLYGQCGHGSTNDQL-RPSYASSLM------DIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
             YGQCG   + D+  RP     ++       + V Q+AAG  H+V ++ EG V+ +G  
Sbjct: 118 NEYGQCGEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTREGYVWTWG-- 175

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
                  G  +  ++P  ++   LE+ R  +++ GA H+  L EDG + +WG N+YGQLG
Sbjct: 176 --QPWPPGDIKQISIPVRVQG--LENVR--LIAVGAFHNLALKEDGTLWAWGNNEYGQLG 229

Query: 429 LGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAETTQI 467
            GD+  R+ P  +P+ G       +IA G WH+  L    ++
Sbjct: 230 TGDTQPRSFP--IPVQGLDDLTLVDIAAGGWHSTALTNEGEV 269



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           V  +G  + GQLG G D+ + +  ++E   LE    + V  G+R+S  + +DG++ +WGW
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVEA--LEPFNVRSVVGGSRNSLAICDDGKLFTWGW 64

Query: 422 NKYGQLGL-GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           N+ G LG   ++   + PSLV  +        A G WH L + +
Sbjct: 65  NQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDD 108


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
           anatinus]
          Length = 3053

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL P LV       I KVAA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 186 TLGPQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL-EEPK 244

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I  L                    SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 245 MISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 284

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ DQ  P   + L  ++V  ++  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 285 YGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 344

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 345 GGSDGCKTPKLIEK--LQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 402

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 403 RYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEV 435



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 115/221 (52%), Gaps = 29/221 (13%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH + L+  G+V+ WG G +G+LG  SR+                  
Sbjct: 1234 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 1277

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    
Sbjct: 1278 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT 1328

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
            QL+P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  NVP+ 
Sbjct: 1329 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQN 1388

Query: 387  LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
            +E   L  +    + CGA+ S  LT+ G V +WG   +G+L
Sbjct: 1389 IER--LNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 142/355 (40%), Gaps = 70/355 (19%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 2261 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGA 2320

Query: 157  QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             SA  T              V     S  +        GD    L P LV    G ++  
Sbjct: 2321 HSACIT--------------VAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVID 2366

Query: 217  VA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
            +A  +G   TL L+D   VW WG G  G+LG G                  + G   P+ 
Sbjct: 2367 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVPMK 2409

Query: 275  VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
            +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP  
Sbjct: 2410 I--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 2461

Query: 335  ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
               L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L+ 
Sbjct: 2462 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--LQG 2519

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLP 448
            K+   V+CG+ H+         L+W  +K    G        +P+ VP+ +  LP
Sbjct: 2520 KKINRVACGSAHT---------LAWSTSKPANAG-------KLPTQVPMEYNHLP 2558



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 133/269 (49%), Gaps = 36/269 (13%)

Query: 202  SPC--LVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            +PC  L TL P   I     GG  TL  ++  G+++  GYG  G+LG     + V TP L
Sbjct: 2196 TPCEALATLRPVQLI-----GGEQTLFAVTADGKLYATGYGAGGRLG-IGGTESVSTPTL 2249

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + V++ +VNS              GG+H   ++  G + ++G    
Sbjct: 2250 LESIQH--------VFVKKVAVNS--------------GGKHCLALSSEGEVYSWGEAED 2287

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+ +   RP    SL  I+V  IAAG  H+ CI+V G +Y +G  ++G+LG G  
Sbjct: 2288 GKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDS 2347

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G S    
Sbjct: 2348 EDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 2405

Query: 437  IPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            +P  +  + G     + CG   ++ L ++
Sbjct: 2406 VPMKIDSLTGLGVVKVECGSQFSVALTKS 2434



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K A+G      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 1129 NAGSLIRKKASGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 1179

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 1180 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 1219

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L +  V+++A  +G  H + ++V+G+V+ +G    G+LG       + 
Sbjct: 1220 SGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDK 1279

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA +T  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 1280 PRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 1337

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 1338 LLGHRVIQVACGSRDAQTLALTDE 1361



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LVT   G+K+  V+  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 299 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 357

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           + ++ CG + S  +T  G + ++G G   +
Sbjct: 358 KLQDLD------------------------IVKVRCGSQFSIALTKDGQVYSWGKGDNQR 393

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 394 LGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRIT 453

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 454 KPQPSAL--PGLDTKHIVGIACGPAQS 478



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 117/287 (40%), Gaps = 56/287 (19%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P L+      +I  +A G  H+  ++  G+++ WG G  G+LG G       T  L P +
Sbjct: 1280 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN-----TTQLKPKM 1334

Query: 263  EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR--HSAVVTDAGALLTFGWGLYGQ 320
                 G                      V ++ACG R   +  +TD G + ++G G +G+
Sbjct: 1335 VKVLLGH--------------------RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 1374

Query: 321  CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL--GTGVD 378
             G G +     P     L    V QI  G   ++ ++  G V+ +G   FG+L   + + 
Sbjct: 1375 LGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHIV 1434

Query: 379  QAENVPK----------LLETPI--LESKRA---KVVSCGARHSAVLTEDGQ-------- 415
            Q+ NV            L+  P   L S R    ++V    R+S + +  GQ        
Sbjct: 1435 QSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGI-ERNSGISSFCGQQGERRERQ 1493

Query: 416  --VLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
              V +WG N +GQ G G +     P+LV  + G     +ACG  H++
Sbjct: 1494 LEVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 1540



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 152/401 (37%), Gaps = 91/401 (22%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    PLP + +     VVK 
Sbjct: 1188 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPLPRQITALSNYVVKK 1239

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H +++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 1240 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 1289

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 1290 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 1349

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 1350 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNVPQNIER- 1391

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ-------CGHGSTNDQLR 331
             +N  G      V +I CG + S  +T +G + T+G G +G+          G+ +D++R
Sbjct: 1392 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHIVQSGNVSDRMR 1444

Query: 332  -PSYASSLMDIQVEQIAAGL---WHTVCISVEG-----------------RVYVFGGNQF 370
              +  + L+ +    + +     W  V I                      VY +G N  
Sbjct: 1445 VRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRERQLEVYAWGDNDH 1504

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
            GQ G G       P L++   LE ++   V+CG+ HS   T
Sbjct: 1505 GQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAWT 1543



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 54/206 (26%)

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV--FGGNQ 369
             GWGL G   + +    + P     L ++ V QIA      + +S  GRVYV  +  + 
Sbjct: 130 VIGWGLIGWKYYANV---IGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYNSDT 186

Query: 370 FG-QLGTGVDQAENVPKL------------------------------------LETPIL 392
            G QL  G+  + N+ K+                                    LE P +
Sbjct: 187 LGPQLVQGL-ASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKM 245

Query: 393 ES--------KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-I 443
            S        K    ++CG+ +SA +T +G++ +WG   YG+LG G S D+ IP LV  +
Sbjct: 246 ISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL 305

Query: 444 HGFLPRNIACGW--WHTLLLAETTQI 467
            G    +++CG     TL + E  Q+
Sbjct: 306 KGLKVIDVSCGSGDAQTLAVTENGQV 331



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 136/352 (38%), Gaps = 73/352 (20%)

Query: 41   PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
            P+P ++    ++   K     G   A+A +  GK+ +WG  DD G+    S  + + P  
Sbjct: 1224 PLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 1282

Query: 98   FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
                    +   A G +H  ++T +GE+YTWG  E          +G  G    D+T   
Sbjct: 1283 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YGRLG--HGDNT--- 1327

Query: 158  SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
                T+  P   K   G  V+   + +    +++  A  DE    S              
Sbjct: 1328 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 1380

Query: 203  -PCLVTLN----PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
              C V  N     G  + ++  G + +L L+  G VW WG G  G+L         P  H
Sbjct: 1381 EGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELR--------PDSH 1432

Query: 258  LIPCLEHAASGKDRPLLVRQGS----VNSSGKAG-RSYVKEIACGGRHSAVVTDAG---- 308
            ++     + +  DR  +  +G+    +   G    R    EI    R+S + +  G    
Sbjct: 1433 IV----QSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGE 1488

Query: 309  ----ALLTFGWG--LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
                 L  + WG   +GQ G+G+T    +P+    L   ++ ++A G  H+V
Sbjct: 1489 RRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 1540



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 2424 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 2482

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 2483 CTEDGEVYTWG 2493



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 2174 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 2233

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      +   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 2234 GRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 2293

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P +V  + G    +IA G  H+
Sbjct: 2294 NRSPCDRPRVVESLRGIEVVDIAAGGAHS 2322



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
           CG G    LA +E+G++ +WG  D     Y   G+ G    +TP+      +  +VK   
Sbjct: 315 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 369

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G    +++T+ G+VY+WG
Sbjct: 370 GSQFSIALTKDGQVYSWG 387


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 678 TLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 736

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 737 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 776

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 777 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 836

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 837 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 894

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 895 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 927



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 29/203 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 791 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 849

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 850 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 885

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 886 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 945

Query: 381 ENVPKLLETPILESKRAKVVSCG 403
           +  P  L  P L++K    ++CG
Sbjct: 946 KPEPSAL--PGLDTKHIVGIACG 966



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 855 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 913

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 914 GSTHCLALTEDSEVHSWG 931



 Score = 42.4 bits (98), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 713 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 769

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 770 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 820

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 821 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 870

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 871 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 930

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 931 GSNDQCQHFDTLRVTK-PEPSALPGLD 956


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 133/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK G  +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 VISAF--------------------SGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 29/210 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3142

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+P+ +E 
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSW 419
              L  +    + CGA+ S  LT+ G V +W
Sbjct: 3203 --LNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 3918 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3977

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 3978 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4037

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4038 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4097

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4098 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4155

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4156 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4205



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 144/351 (41%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 3933 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 3992

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV +  G ++
Sbjct: 3993 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEVLQGHRV 4036

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4037 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4079

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4080 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4131

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4132 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4189

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4190 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4224



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 125/257 (48%), Gaps = 27/257 (10%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L        
Sbjct: 2992 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSS------ 3045

Query: 271  RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
               +V++ +V+S              GGRH+  +T  G + ++G G  G+ GH S  +  
Sbjct: 3046 --YVVKKVAVHS--------------GGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCD 3089

Query: 331  RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            +P    +L   ++  IA G  H+  ++  G +Y +G  ++G+LG G +  +  PK+++  
Sbjct: 3090 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-- 3147

Query: 391  ILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
            +L   R   V+CG+R   +  LT++G V SWG   +G+LG G S   NIP  +  ++G  
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 3207

Query: 448  PRNIACGWWHTLLLAET 464
               I CG   +L L ++
Sbjct: 3208 VCQIECGAQFSLALTKS 3224



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPIQLIGGEQTLFAVTAD 3894

Query: 284  GK----------------------------AGRSYVKEIAC--GGRHSAVVTDAGALLTF 313
            GK                                ++K++A   GG+H   ++  G + ++
Sbjct: 3895 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3954

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 3955 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4014

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E  +L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4015 GHSDSEDQLKPKLVE--VLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4072

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4073 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4106



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2994

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G +   G    G+ G G ++  +  P   ++L    V+++A 
Sbjct: 2995 -VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3053

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3111

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA LT  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 466  Q 466
            +
Sbjct: 3172 E 3172



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPTAL--PGLDTKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4096 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4154

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4155 CTEDGEVYTWG 4165



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 42.0 bits (97), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 27/163 (16%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P L+      +I  +A G  H+  L+  G+++ WG G  G+LG G       T  L P +
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN-----TTQLKPKM 3145

Query: 263  EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR--HSAVVTDAGALLTFGWGLYGQ 320
                 G                      V ++ACG R   +  +TD G + ++G G +G+
Sbjct: 3146 VKVLLGH--------------------RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3185

Query: 321  CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
             G G +     P     L    V QI  G   ++ ++  G V+
Sbjct: 3186 LGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228



 Score = 41.6 bits (96), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 102/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G    K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTLPLEEP---KVISAFSGKQGGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPTALPGLD 760



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 80/209 (38%), Gaps = 36/209 (17%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGK------HGETPEPFPLPTEAS-VVKA 109
             GG     A +  GK+   G A        T+G+       G  P P  +   +S VVK 
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGLSSGTVPIPRQITALSSYVVKK 3050

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H  ++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3051 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3100

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3101 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLG 247
             R   TL L+D G V+ WG G  G+LG G
Sbjct: 3161 SRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 3932 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 3983

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   VT AG++YTWG
Sbjct: 3984 VVDVAAGGAHSACVTAAGDLYTWG 4007



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)

Query: 41   PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
            PIP ++    S+   K     G   A A +  GK+ +WG  DD G+    S  + + P  
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093

Query: 98   FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
                    +   A G +H  ++T +GE+YTWG  E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 29/242 (11%)

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            H++ L++ G+V+ WG G  G+LG G+  +                 + R +   QG    
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHGNSDR---------------QRRPRQIEALQGE--- 4127

Query: 283  SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                    V +++CG +HSAVVT  G L TFG G YG+ G G+T+++  P   ++L   Q
Sbjct: 4128 -------EVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQ 4180

Query: 343  VEQIAAGLWHTVCISVEG-RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            + Q+A GL HT+ +SV+G  V+ FG   +G+LG G   A++ P+ ++  +L     K V+
Sbjct: 4181 IGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKID--VLCGIGIKKVA 4238

Query: 402  CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLL 460
            CG + S  LT+DG V ++G ++   L  G + + N P  +P+  G +  ++A G  HTL 
Sbjct: 4239 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLA 4298

Query: 461  LA 462
            LA
Sbjct: 4299 LA 4300



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 36/243 (14%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           I+S+  +V+ WG     QL  G++ K++  P L P    A +                  
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKIL-QPKLAPSFSDAQT------------------ 407

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-----LRPSYASSLMD 340
                   I  G   + V++  G++   G G YG+ G G +N+Q     L      S+  
Sbjct: 408 --------IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           +   + + G  HT+  + EG V+ +G   +G+LG G    +  PKL++ P L+ K    V
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCV 516

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           S G RHSA +TEDG++ +WG   +G+LG GDS  RNIP+LV     +   ++CG  HT+ 
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIA 575

Query: 461 LAE 463
           L++
Sbjct: 576 LSK 578



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 34/231 (14%)

Query: 233  VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
            V+ WG G  GQL    R  MVP                            +     S  +
Sbjct: 3992 VYLWGAGRHGQLAEAGRNVMVP----------------------------AAAPSFSQAQ 4023

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL-- 350
            ++ CG   + V+   G +L  G G YG+ G G+++D    +  S+L    V Q+      
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4083

Query: 351  -WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
              H++ ++  G V+ +G   +G+LG G    +  P+ +E   L+ +    +SCG +HSAV
Sbjct: 4084 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFKHSAV 4141

Query: 410  LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            +T DG++ ++G   YG+LGLG++ ++ +P  V  + G+    +ACG  HTL
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4192



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 26/250 (10%)

Query: 216  KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            +V  G   T ++   G V   G G  G+LG G+   +    H++  +  A  G      V
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL----HVLTVIS-ALQG-----FV 4073

Query: 276  RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                V S G  G            HS  +T++G + ++G G YG+ GHG+++ Q RP   
Sbjct: 4074 VTQLVTSCGSDG------------HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI 4121

Query: 336  SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
             +L   +V Q++ G  H+  ++ +G+++ FG   +G+LG G    + +P+      LE  
Sbjct: 4122 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE--RVTALEGY 4179

Query: 396  RAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIAC 453
            +   V+CG  H+  ++ DG ++ ++G   YG+LGLG+S  ++ P  + +  G   + +AC
Sbjct: 4180 QIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4239

Query: 454  GWWHTLLLAE 463
            G   ++ L +
Sbjct: 4240 GTQFSVALTK 4249



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 32/219 (14%)

Query: 206 VTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           +T  P   I KV++      HTL  +  G+V+ WG G  G+LG G+              
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGN-------------- 494

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
              +S +  P L+ QG +   GK     V  ++ G RHSA VT+ G L T+G G +G+ G
Sbjct: 495 ---SSTQKYPKLI-QGPLQ--GKV----VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAE 381
           HG +N +  P+    + +  V +++ G  HT+ +S +GR V+ FGG   G+LG G     
Sbjct: 545 HGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
             PK++E   L+    + V  G++ S  LT  GQV +WG
Sbjct: 603 YKPKVIEA--LQGMFIRKVCAGSQSSLALTSTGQVYAWG 639



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +  V+AG RH+  +++ G+++ WG G  G+LG G                  ++ ++
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD-----------------SNSRN 552

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            P LV+            S V E++CG  H+ A+  D   + +FG G  G+ GHG TN  
Sbjct: 553 IPTLVKD----------ISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLE 388
            +P    +L  + + ++ AG   ++ ++  G+VY +G      LG G  +A  + PKL+E
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE 660

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
              L + R   VS G  H   L+ D +V +WG N  GQ G G+S
Sbjct: 661 E--LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 154/397 (38%), Gaps = 75/397 (18%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
            P  +P  S     +CG +    +   G   A      G+L   G++DD     + S   G
Sbjct: 4013 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4071

Query: 93   ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
                 F +     +V +     H +++TE+GEV++WG            D+G  G    D
Sbjct: 4072 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4113

Query: 153  STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
               +   +   Q        GEEVV   + S   + S    S  + FT            
Sbjct: 4114 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4162

Query: 203  -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVP 254
                   P  VT   G +I +VA G  HTL +S D   VW +G G  G+LGLG+      
Sbjct: 4163 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN------ 4216

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       ++ K  P       ++     G   +K++ACG + S  +T  G + TFG
Sbjct: 4217 -----------STAKSSP-----QKIDVLCGIG---IKKVACGTQFSVALTKDGHVYTFG 4257

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
                     G   +  RP     L  + +E +A G  HT+ ++  G VY +G N  GQLG
Sbjct: 4258 QDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLG 4317

Query: 375  TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
             G       P L+    L+ K  + +S G  HSA  T
Sbjct: 4318 LGHTNHVREPTLVTG--LQGKNVRQISAGRCHSAAWT 4352



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 125/314 (39%), Gaps = 64/314 (20%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
           G  G  LA +  G++ +WG  D     Y   G    + + +P     P +  VV   +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           + H  +VTE GE+YTWG            DFG  G    DS  +   +PT     S+   
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563

Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
           GE       T +  ++     S           GD      P ++    G+ I KV AG 
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
           + +L L+  GQV+ WG G    LG GS       P LI   E  A+ +            
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI---EELAATR------------ 666

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMD 340
                    + +++ G  H   ++    +  +G    GQCG G ST    +P   S L  
Sbjct: 667 ---------IVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDG 717

Query: 341 IQVEQIAAGLWHTV 354
           I ++QI+AG  H++
Sbjct: 718 IAIQQISAGTSHSL 731



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 362  VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
            VY++G  + GQL    +   NV      P     +A+ V CG   + V+  +G VL+ G 
Sbjct: 3992 VYLWGAGRHGQLA---EAGRNVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGE 4046

Query: 422  NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI--ACGW-WHTLLLAETTQI 467
              YG+LG G+S D ++ +++  + GF+   +  +CG   H++ L E+ ++
Sbjct: 4047 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4096


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 29/242 (11%)

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            H++ L++ G+V+ WG G  G+LG G+  +                 + R +   QG    
Sbjct: 4030 HSMALTESGEVFSWGDGDYGKLGHGNSDR---------------QRRPRQIEALQGE--- 4071

Query: 283  SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                    V +++CG +HSAVVT  G L TFG G YG+ G G+T+++  P   ++L   Q
Sbjct: 4072 -------EVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQ 4124

Query: 343  VEQIAAGLWHTVCISVEG-RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            + Q+A GL HT+ +SV+G  V+ FG   +G+LG G   A++ P+ ++  +L     K V+
Sbjct: 4125 IGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKID--VLCGIGIKKVA 4182

Query: 402  CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLL 460
            CG + S  LT+DG V ++G ++   L  G + + N P  +P+  G +  ++A G  HTL 
Sbjct: 4183 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLA 4242

Query: 461  LA 462
            LA
Sbjct: 4243 LA 4244



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 36/243 (14%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           I+S+  +V+ WG     QL  G++ K++  P L P    A +                  
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKIL-QPKLAPSFSDAQT------------------ 407

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-----LRPSYASSLMD 340
                   I  G   + V++  G++   G G YG+ G G +N+Q     L      S+  
Sbjct: 408 --------IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           +   + + G  HT+  + EG V+ +G   +G+LG G    +  PKL++ P L+ K    V
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCV 516

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           S G RHSA +TEDG++ +WG   +G+LG GDS  RNIP+LV     +   ++CG  HT+ 
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIA 575

Query: 461 LAE 463
           L++
Sbjct: 576 LSK 578



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 34/231 (14%)

Query: 233  VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
            V+ WG G  GQL    R  MVP                            +     S  +
Sbjct: 3936 VYLWGAGRHGQLAEAGRNVMVP----------------------------AAAPSFSQAQ 3967

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL-- 350
            ++ CG   + V+   G +L  G G YG+ G G+++D    +  S+L    V Q+      
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4027

Query: 351  -WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
              H++ ++  G V+ +G   +G+LG G    +  P+ +E   L+ +    +SCG +HSAV
Sbjct: 4028 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFKHSAV 4085

Query: 410  LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            +T DG++ ++G   YG+LGLG++ ++ +P  V  + G+    +ACG  HTL
Sbjct: 4086 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4136



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 26/250 (10%)

Query: 216  KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            +V  G   T ++   G V   G G  G+LG G+   +    H++  +  A  G      V
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL----HVLTVIS-ALQG-----FV 4017

Query: 276  RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                V S G  G            HS  +T++G + ++G G YG+ GHG+++ Q RP   
Sbjct: 4018 VTQLVTSCGSDG------------HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI 4065

Query: 336  SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
             +L   +V Q++ G  H+  ++ +G+++ FG   +G+LG G    + +P+      LE  
Sbjct: 4066 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE--RVTALEGY 4123

Query: 396  RAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIAC 453
            +   V+CG  H+  ++ DG ++ ++G   YG+LGLG+S  ++ P  + +  G   + +AC
Sbjct: 4124 QIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4183

Query: 454  GWWHTLLLAE 463
            G   ++ L +
Sbjct: 4184 GTQFSVALTK 4193



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 32/219 (14%)

Query: 206 VTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           +T  P   I KV++      HTL  +  G+V+ WG G  G+LG G+              
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGN-------------- 494

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
              +S +  P L+ QG +   GK     V  ++ G RHSA VT+ G L T+G G +G+ G
Sbjct: 495 ---SSTQKYPKLI-QGPLQ--GKV----VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAE 381
           HG +N +  P+    + +  V +++ G  HT+ +S +GR V+ FGG   G+LG G     
Sbjct: 545 HGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
             PK++E   L+    + V  G++ S  LT  GQV +WG
Sbjct: 603 YKPKVIEA--LQGMFIRKVCAGSQSSLALTSTGQVYAWG 639



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +  V+AG RH+  +++ G+++ WG G  G+LG G                  ++ ++
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD-----------------SNSRN 552

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            P LV+            S V E++CG  H+ A+  D   + +FG G  G+ GHG TN  
Sbjct: 553 IPTLVKD----------ISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLE 388
            +P    +L  + + ++ AG   ++ ++  G+VY +G      LG G  +A  + PKL+E
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE 660

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
              L + R   VS G  H   L+ D +V +WG N  GQ G G+S
Sbjct: 661 E--LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 154/397 (38%), Gaps = 75/397 (18%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
            P  +P  S     +CG +    +   G   A      G+L   G++DD     + S   G
Sbjct: 3957 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4015

Query: 93   ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
                 F +     +V +     H +++TE+GEV++WG            D+G  G    D
Sbjct: 4016 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4057

Query: 153  STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
               +   +   Q        GEEVV   + S   + S    S  + FT            
Sbjct: 4058 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4106

Query: 203  -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVP 254
                   P  VT   G +I +VA G  HTL +S D   VW +G G  G+LGLG+      
Sbjct: 4107 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN------ 4160

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       ++ K  P       ++     G   +K++ACG + S  +T  G + TFG
Sbjct: 4161 -----------STAKSSP-----QKIDVLCGIG---IKKVACGTQFSVALTKDGHVYTFG 4201

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
                     G   +  RP     L  + +E +A G  HT+ ++  G VY +G N  GQLG
Sbjct: 4202 QDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLG 4261

Query: 375  TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
             G       P L+    L+ K  + +S G  HSA  T
Sbjct: 4262 LGHTNHVREPTLVTG--LQGKNVRQISAGRCHSAAWT 4296



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 125/314 (39%), Gaps = 64/314 (20%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
           G  G  LA +  G++ +WG  D     Y   G    + + +P     P +  VV   +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           + H  +VTE GE+YTWG            DFG  G    DS  +   +PT     S+   
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563

Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
           GE       T +  ++     S           GD      P ++    G+ I KV AG 
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
           + +L L+  GQV+ WG G    LG GS       P LI   E  A+ +            
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI---EELAATR------------ 666

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMD 340
                    + +++ G  H   ++    +  +G    GQCG G ST    +P   S L  
Sbjct: 667 ---------IVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDG 717

Query: 341 IQVEQIAAGLWHTV 354
           I ++QI+AG  H++
Sbjct: 718 IAIQQISAGTSHSL 731



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 362  VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
            VY++G  + GQL    +   NV      P     +A+ V CG   + V+  +G VL+ G 
Sbjct: 3936 VYLWGAGRHGQLA---EAGRNVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGE 3990

Query: 422  NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI--ACGW-WHTLLLAETTQI 467
              YG+LG G+S D ++ +++  + GF+   +  +CG   H++ L E+ ++
Sbjct: 3991 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4040


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL P LV       I K+AA   G H L LS  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           LI  L                    SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 LISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ DQ  P   + L  ++V  ++  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV +WG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 133/306 (43%), Gaps = 82/306 (26%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH + L+  G+++ WG G +G+LG  SR+                  
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNC---------------- 3091

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    
Sbjct: 3092 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT 3142

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--- 383
            QL+P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+   
Sbjct: 3143 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3202

Query: 384  -------------------------------------------------PKLLETPILES 394
                                                             P+++E   L  
Sbjct: 3203 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG--LRG 3260

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
            K+   V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +AC
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 454  GWWHTL 459
            G  H++
Sbjct: 3321 GSSHSV 3326



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 144/355 (40%), Gaps = 81/355 (22%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG  E                      G  +  P ++  
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGNRSPCDRPR 4088

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFF----------------TLSPCLVTLNP 210
              +   G EVV     +     +   A+GD F                  L P LV    
Sbjct: 4089 VIESLRGIEVVD--IAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQ 4146

Query: 211  GVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            G ++  +A  +G   TL L+D   VW WG G  G+LG G                  + G
Sbjct: 4147 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDG 4189

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
               P+      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS + 
Sbjct: 4190 CKVPM-----KIDSLTDLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4241

Query: 329  QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              RP     L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+ 
Sbjct: 4242 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4301

Query: 389  TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
               L+ K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4302 A--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLPTQVPM 4338



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 49/247 (19%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4008

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4068

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  IAAG  H+ CI+  G ++ +G  ++G+L
Sbjct: 4069 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4128

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G G  + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4129 GHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 432  SIDRNIP 438
            S    +P
Sbjct: 4187 SDGCKVP 4193



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3053

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H +++T  G++++WG            D G  G F + +  K   +   +  
Sbjct: 3054 VAVHSGGRHAMALTVDGKIFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3205

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHG+     +P     L
Sbjct: 3206 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL 3258

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3259 RGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3316

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3317 RVACGSSHSVAWT 3329



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  + K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2943 NTGSLVRKKAAGLESAATIR--TKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2993

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2994 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3033

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L +  V+++A  +G  H + ++V+G+++ +G    G+LG       + 
Sbjct: 3034 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDK 3093

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA +T  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3094 PRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3151

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3152 LLGHRVIQVACGSRDAQTLALTDE 3175



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LVT   G+K+  V+  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           + ++ CG + S  +T  G + T+G G   +
Sbjct: 654 KLQDLD------------------------IVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRIT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPAAL--PGLDTKHIVGIACGPAQS 774



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           D+    CG  F++A ++ G++ TWG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4269 CTEDGEVYTWG 4279



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 3960 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      +   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 4079

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    +IA G  H+
Sbjct: 4080 NRSPCDRPRVIESLRGIEVVDIAAGGAHS 4108



 Score = 41.6 bits (96), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
           CG G    LA +E+G++ +WG  D     Y   G+ G    +TP+      +  +VK   
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 665

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G    +++T+ G+VYTWG
Sbjct: 666 GSQFSIALTKDGQVYTWG 683



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 103/275 (37%), Gaps = 64/275 (23%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           V+ WG   G       T P + P L    + L G  + K V    CG  ++ A +  G+L
Sbjct: 517 VFSWGCGDGGRLGHGDTVPLEEPKLI---SALSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++D+    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDQTIPMLVTGLKG---------LKVIDVSCGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G+V++WG            D+G  G    D       +        +K    ++VK R  
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLI--------EKLQDLDIVKVRCG 666

Query: 183 SS--------------AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           S                + +++    G E     P L+    G K+  VAAG  H L L+
Sbjct: 667 SQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALT 726

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           +  +V  WG   + Q     RI   P P  +P L+
Sbjct: 727 EDSEVHSWGSNDQCQHFDTLRITK-PEPAALPGLD 760


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
           gallopavo]
          Length = 4815

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL P LV       I K+AA   G H L LS  G+V+ WG G  G+LG G  + +   P 
Sbjct: 458 TLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL-EEPK 516

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           LI  L                    SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 517 LISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 556

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ DQ  P   + L  ++V  ++  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 557 YGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 616

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV +WG     +LG G     
Sbjct: 617 GGSDGCKTPKLIEK--LQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHV 674

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 675 RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEV 707



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 133/306 (43%), Gaps = 82/306 (26%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH + L+  G+++ WG G +G+LG  SR+                  
Sbjct: 3024 NYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNC---------------- 3067

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    
Sbjct: 3068 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT 3118

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--- 383
            QL+P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+   
Sbjct: 3119 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3178

Query: 384  -------------------------------------------------PKLLETPILES 394
                                                             P+++E   L  
Sbjct: 3179 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG--LRG 3236

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
            K+   V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +AC
Sbjct: 3237 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3296

Query: 454  GWWHTL 459
            G  H++
Sbjct: 3297 GSSHSV 3302



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 144/355 (40%), Gaps = 81/355 (22%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG  E                      G  +  P ++  
Sbjct: 4023 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGNRSPCDRPR 4064

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFF----------------TLSPCLVTLNP 210
              +   G EVV     +     +   A+GD F                  L P LV    
Sbjct: 4065 VIESLRGIEVVD--IAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQ 4122

Query: 211  GVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            G ++  +A  +G   TL L+D   VW WG G  G+LG G                  + G
Sbjct: 4123 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDG 4165

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
               P+      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS + 
Sbjct: 4166 CKVPM-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4217

Query: 329  QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              RP     L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+ 
Sbjct: 4218 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4277

Query: 389  TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
               L+ K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4278 A--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLPTQVPM 4314



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 129/274 (47%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 3984

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 3985 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4044

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  IAAG  H+ CI+  G ++ +G  ++G+L
Sbjct: 4045 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4104

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G G  + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4105 GHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4162

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4163 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4196



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 2978 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3029

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H +++T  G++++WG            D G  G F + +  K   +   +  
Sbjct: 3030 VAVHSGGRHAMALTVDGKIFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3079

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3080 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3139

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3140 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3181

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHG+     +P     L
Sbjct: 3182 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL 3234

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3235 RGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3292

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3293 RVACGSSHSVAWT 3305



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  + K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2919 NTGSLVRKKAAGLESAATIR--TKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2969

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2970 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3009

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L +  V+++A  +G  H + ++V+G+++ +G    G+LG       + 
Sbjct: 3010 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDK 3069

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA +T  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3070 PRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3127

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3128 LLGHRVIQVACGSRDAQTLALTDE 3151



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LVT   G+K+  V+  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 571 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 629

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           + ++ CG + S  +T  G + T+G G   +
Sbjct: 630 KLQDLD------------------------IVKVRCGSQFSIALTKDGQVYTWGKGDNQR 665

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 666 LGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRIT 725

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 726 KPEPAAL--PGLDTKHIVGIACGPAQS 750



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           D+    CG  F++A ++ G++ TWG  D++   + T  +H   P+         V+  AA
Sbjct: 635 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 693

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 694 GSTHCLALTEDSEVHSWG 711



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4186 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4244

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4245 CTEDGEVYTWG 4255



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
           CG G    LA +E+G++ +WG  D     Y   G+ G    +TP+      +  +VK   
Sbjct: 587 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 641

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G    +++T+ G+VYTWG
Sbjct: 642 GSQFSIALTKDGQVYTWG 659



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 103/275 (37%), Gaps = 64/275 (23%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           V+ WG   G       T P + P L    + L G  + K V    CG  ++ A +  G+L
Sbjct: 493 VFSWGCGDGGRLGHGDTVPLEEPKLI---SALSGKQAGKHVVHIACGSTYSAAITAEGEL 549

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++D+    L +G  G          +   V   +G A  ++VTE 
Sbjct: 550 YTWGRGNYGRLGHGSSEDQTIPMLVTGLKG---------LKVIDVSCGSGDAQTLAVTEN 600

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G+V++WG            D+G  G    D       +        +K    ++VK R  
Sbjct: 601 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLI--------EKLQDLDIVKVRCG 642

Query: 183 SS--------------AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           S                + +++    G E     P L+    G K+  VAAG  H L L+
Sbjct: 643 SQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALT 702

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           +  +V  WG   + Q     RI   P P  +P L+
Sbjct: 703 EDSEVHSWGSNDQCQHFDTLRITK-PEPAALPGLD 736


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 29/242 (11%)

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            H++ L++ G+V+ WG G  G+LG G+  +                 + R +   QG    
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDR---------------QRRPRQIEALQGE--- 4134

Query: 283  SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                    V +++CG +HSAVVT  G L TFG G YG+ G G+T+++  P   ++L   Q
Sbjct: 4135 -------EVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQ 4187

Query: 343  VEQIAAGLWHTVCISVEG-RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            + Q+A GL HT+ +SV+G  V+ FG   +G+LG G   A++ P+ ++  +L     K V+
Sbjct: 4188 IGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKID--VLCGIGIKKVA 4245

Query: 402  CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLL 460
            CG + S  LT+DG V ++G ++   L  G + + N P  +P+  G +  ++A G  HTL 
Sbjct: 4246 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLA 4305

Query: 461  LA 462
            LA
Sbjct: 4306 LA 4307



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 34/231 (14%)

Query: 233  VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
            V+ WG G  GQL    R  MVP                            +     S  +
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP----------------------------AAAPSFSQAQ 4030

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL-- 350
            ++ CG   + V+   G +L  G G YG+ G G+++D    +  S+L    V Q+      
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090

Query: 351  -WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
              H++ ++  G V+ +G   +G+LG G    +  P+ +E   L+ +    +SCG +HSAV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFKHSAV 4148

Query: 410  LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            +T DG++ ++G   YG+LGLG++ ++ +P  V  + G+    +ACG  HTL
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 36/243 (14%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           I+S+  +V+ WG     QL  G++ K++  P L P    A +                  
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKIL-QPKLAPSFSDAQT------------------ 407

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-----LRPSYASSLMD 340
                   I  G   + V++  G++   G G YG+ G G +N+Q     L      S+  
Sbjct: 408 --------IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           +   + + G  HT+  + EG V+ +G   +G+LG G    +  PKL++ P L+ K    V
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCV 516

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           S G RHSA +TEDG++ +WG   +G+LG GDS  RNIP+LV     +   ++CG  HT+ 
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIA 575

Query: 461 LAE 463
           L++
Sbjct: 576 LSK 578



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 26/250 (10%)

Query: 216  KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            +V  G   T ++   G V   G G  G+LG G+   +    H++  +  A  G      V
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL----HVLTVIS-ALQG-----FV 4080

Query: 276  RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                V S G  G            HS  +T++G + ++G G YG+ GHG+++ Q RP   
Sbjct: 4081 VTQLVTSCGSDG------------HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI 4128

Query: 336  SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
             +L   +V Q++ G  H+  ++ +G+++ FG   +G+LG G    + +P+      LE  
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE--RVTALEGY 4186

Query: 396  RAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIAC 453
            +   V+CG  H+  ++ DG ++ ++G   YG+LGLG+S  ++ P  + +  G   + +AC
Sbjct: 4187 QIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4246

Query: 454  GWWHTLLLAE 463
            G   ++ L +
Sbjct: 4247 GTQFSVALTK 4256



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 32/219 (14%)

Query: 206 VTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           +T  P   I KV++      HTL  +  G+V+ WG G  G+LG G+              
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGN-------------- 494

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
              +S +  P L+ QG +   GK     V  ++ G RHSA VT+ G L T+G G +G+ G
Sbjct: 495 ---SSTQKYPKLI-QGPLQ--GKV----VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAE 381
           HG +N +  P+    + +  V +++ G  HT+ +S +GR V+ FGG   G+LG G     
Sbjct: 545 HGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
             PK++E   L+    + V  G++ S  LT  GQV +WG
Sbjct: 603 YKPKVIEA--LQGMFIRKVCAGSQSSLALTSTGQVYAWG 639



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +  V+AG RH+  +++ G+++ WG G  G+LG G                  ++ ++
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD-----------------SNSRN 552

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            P LV+            S V E++CG  H+ A+  D   + +FG G  G+ GHG TN  
Sbjct: 553 IPTLVKD----------ISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLE 388
            +P    +L  + + ++ AG   ++ ++  G+VY +G      LG G  +A  + PKL+E
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE 660

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
              L + R   VS G  H   L+ D +V +WG N  GQ G G+S
Sbjct: 661 E--LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 154/397 (38%), Gaps = 75/397 (18%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
            P  +P  S     +CG +    +   G   A      G+L   G++DD     + S   G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078

Query: 93   ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
                 F +     +V +     H +++TE+GEV++WG            D+G  G    D
Sbjct: 4079 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120

Query: 153  STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
               +   +   Q        GEEVV   + S   + S    S  + FT            
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169

Query: 203  -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVP 254
                   P  VT   G +I +VA G  HTL +S D   VW +G G  G+LGLG+      
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN------ 4223

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       ++ K  P       ++     G   +K++ACG + S  +T  G + TFG
Sbjct: 4224 -----------STAKSSP-----QKIDVLCGIG---IKKVACGTQFSVALTKDGHVYTFG 4264

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
                     G   +  RP     L  + +E +A G  HT+ ++  G VY +G N  GQLG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLG 4324

Query: 375  TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
             G       P L+    L+ K  + +S G  HSA  T
Sbjct: 4325 LGHTNHVREPTLVTG--LQGKNVRQISAGRCHSAAWT 4359



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 125/314 (39%), Gaps = 64/314 (20%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
           G  G  LA +  G++ +WG  D     Y   G    + + +P     P +  VV   +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           + H  +VTE GE+YTWG            DFG  G    DS  +   +PT     S+   
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563

Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
           GE       T +  ++     S           GD      P ++    G+ I KV AG 
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
           + +L L+  GQV+ WG G    LG GS       P LI   E  A+ +            
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI---EELAATR------------ 666

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMD 340
                    + +++ G  H   ++    +  +G    GQCG G ST    +P   S L  
Sbjct: 667 ---------IVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDG 717

Query: 341 IQVEQIAAGLWHTV 354
           I ++QI+AG  H++
Sbjct: 718 IAIQQISAGTSHSL 731



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 362  VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
            VY++G  + GQL    +   NV      P     +A+ V CG   + V+  +G VL+ G 
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 422  NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI--ACGW-WHTLLLAETTQI 467
              YG+LG G+S D ++ +++  + GF+   +  +CG   H++ L E+ ++
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4103


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 123/249 (49%), Gaps = 30/249 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V++GG+H + LS  G V+ WG G +G+LG G+++                   DR
Sbjct: 4081 IKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSY-----------------DR 4123

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+           G   V +IACGG HSA +T AG L T+G G YG+ GHG ++DQLR
Sbjct: 4124 PKLIED-------LLGVEIV-DIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLR 4175

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L D +V  +A  +G   T+C++ +  V+ +G   +G+LG G      VP  L+ 
Sbjct: 4176 PKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVP--LKI 4233

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIHGFLP 448
              L       V CG++ S  LT  G V +WG   Y +LG G D   R    +  + G   
Sbjct: 4234 DSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4293

Query: 449  RNIACGWWH 457
             +IA G  H
Sbjct: 4294 ISIATGSLH 4302



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V +GG+H L L+  G+V+ WG G +G+LG G+ I +   P LI  L         
Sbjct: 3099 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISL-DKPKLIEVL--------- 3148

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                         K+ R  +++IACG  HSA +   G L T+G G YG+ GHG T  Q R
Sbjct: 3149 -------------KSKR--IRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTR 3193

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTG----------VDQ 379
            P    +L+  +V Q+A G     T+ ++ +G VY +G   FG+LG G          VD+
Sbjct: 3194 PKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLVDR 3253

Query: 380  AENV------------------------------------------PKLLETPILESKRA 397
              N+                                          P L+E   L  K+ 
Sbjct: 3254 LNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG--LRGKKI 3311

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     PSLV  +       ++CG  
Sbjct: 3312 IHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSS 3371

Query: 457  HTL 459
            H++
Sbjct: 3372 HSI 3374



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 32/255 (12%)

Query: 214 ITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           IT +A  A G+H L L+  G V+ WG G  G+LG G  I     P LI  L         
Sbjct: 568 ITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISY-DEPKLIEALLE------- 619

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                              +  IACG  +SA ++  G L T+G G YG+ GHG+ +D + 
Sbjct: 620 -----------------KNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMT 662

Query: 332 PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           P+  ++L    V  +A  +G   T+C++  G V+ +G   +G+LG G       PK+++ 
Sbjct: 663 PTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVD- 721

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            +L+    KV  CG++ SA LT  G+V +WG     +LG G       P ++  +     
Sbjct: 722 KLLDINVVKVF-CGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKV 780

Query: 449 RNIACGWWHTLLLAE 463
           ++++ G  H L L E
Sbjct: 781 KDLSVGTTHILALTE 795



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 28/259 (10%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   +A G +   I+S  G+++  G G  G+LGLG    M   P  IP L         
Sbjct: 3045 LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMCE-PKAIPFLSQ------- 3096

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
              ++++ +V+S              GG+H+  +T  G + ++G G  G+ GHG+     +
Sbjct: 3097 -FVIKKVAVHS--------------GGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDK 3141

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P     L   ++  IA G  H+  I+  G +Y +G  ++G+LG G    +  PKL++  I
Sbjct: 3142 PKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALI 3201

Query: 392  LESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
                R   V+CG+R   +  LT DG V SWG   +G+LG G S     P LV  ++    
Sbjct: 3202 --GHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGV 3259

Query: 449  RNIACGWWHTLLLAETTQI 467
              + CG   +L L +  ++
Sbjct: 3260 IQVECGAQFSLALTKYGEV 3278



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 169/423 (39%), Gaps = 92/423 (21%)

Query: 18   KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
            +++ VY+WG         L G S  K P+ S   ++L      K +   GG       S+
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKG-SKIKLPVYSETLSKL------KPIHIAGGSKTLFIVSQ 3062

Query: 69   SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
             GKL   G   + G+  L    +   P+  P  ++  + K A  +G  H +++T+ G+V+
Sbjct: 3063 EGKLYACGEGTN-GRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVF 3121

Query: 127  TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR---RKTS 183
            +WG                         G+   L        DK    EV+K    R  +
Sbjct: 3122 SWG------------------------EGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIA 3157

Query: 184  SAREESENPASGDEFFT-----------------LSPCLVTLNPGVKITKVAAGGR--HT 224
                 S   AS  E +T                   P LV    G ++ +VA G R   T
Sbjct: 3158 CGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQT 3217

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            + L+  G V+ WG G  G+LG G                  + G   PLLV +  +N+ G
Sbjct: 3218 MALTTDGYVYSWGDGDFGKLGRG-----------------GSDGCYTPLLVDR--LNNLG 3258

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V ++ CG + S  +T  G + T+G G Y + GHG+ +   +P+    L   ++ 
Sbjct: 3259 ------VIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKII 3312

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L+    LE  R   VSCG+
Sbjct: 3313 HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHD--LEDARVNRVSCGS 3370

Query: 405  RHS 407
             HS
Sbjct: 3371 SHS 3373



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 113/252 (44%), Gaps = 33/252 (13%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD      P L+       I  +A G  ++  LS  G+++ WG G  G+LG G+    V 
Sbjct: 603 GDTISYDEPKLIEALLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGN-FDDVM 661

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLT 312
           TP L+  L+                       G + V  +ACG     +  VT +G + +
Sbjct: 662 TPTLVTTLK-----------------------GHTVV-HVACGSGDSQTLCVTASGIVFS 697

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G YG+ G G T+    P     L+DI V ++  G   +  ++  G VY +G     +
Sbjct: 698 WGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYR 757

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG--LG 430
           LG G ++    PK++E+  L  ++ K +S G  H   LTED  V  WG N YGQ+   LG
Sbjct: 758 LGHGSEEHVRYPKVIES--LRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQIDPTLG 815

Query: 431 DSIDRNIPSLVP 442
             I    P+L P
Sbjct: 816 PIISE--PTLCP 825



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 31/234 (13%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-----RIKMVPTPH 257
            P L+    GV+I  +A GG H+  ++  G ++ WG G  G+LG G      R K+V    
Sbjct: 4124 PKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQ 4183

Query: 258  LIPCLEHAASGKDRPLLVRQGSVN-------SSGKAGRS-----------------YVKE 293
                ++ A    D   L      N         GK GR                   V +
Sbjct: 4184 DYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVK 4243

Query: 294  IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
            + CG + S  +T +GA+ T+G G Y + GHG+ +   RP   ++L   ++  IA G  H 
Sbjct: 4244 VECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHC 4303

Query: 354  VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            V  S +G V+ +G N  GQLG G   A + P+L+    L+ K+   V+CG+ H+
Sbjct: 4304 VACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA--LQGKKITRVACGSAHT 4355



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G ++GWG+   GQLG   G ++K+       PC   +A    RP+               
Sbjct: 3994 GAIYGWGHNHRGQLGGLEGPKVKLPA-----PCESLSAL---RPI--------------- 4030

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                ++A G +    VT  G + + G+G  G+ G G T+  + P+   S+  + ++++A 
Sbjct: 4031 ----QLAGGEQTLFAVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAV 4086

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + +S EG VY +G    G+LG G   + + PKL+E   L       ++CG  H
Sbjct: 4087 SSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIED--LLGVEIVDIACGGHH 4144

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA +T  G + +WG  +YG+LG GDS D+  P +V  +  +   ++ACG
Sbjct: 4145 SAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG 4193



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 130/345 (37%), Gaps = 81/345 (23%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
            P+  P LS    +       K     G   ALA ++ GK+ +WG  +D        GK G
Sbjct: 3088 PKAIPFLSQFVIK-------KVAVHSGGKHALALTQDGKVFSWGEGED--------GKLG 3132

Query: 93   -------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
                   + P+   +     +   A G  H  ++   GE+YTWG              G 
Sbjct: 3133 HGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWG-------------LGE 3179

Query: 146  AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV------KRRKTSSAREESENPASGDEFF 199
             G      T  Q+     QA       G  VV      +  +T +   +    + GD  F
Sbjct: 3180 YGRLGHGDTITQTRPKLVQA-----LIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDF 3234

Query: 200  ----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
                        +P LV     + + +V  G + +L L+  G+VW WG G   +LG G+ 
Sbjct: 3235 GKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGN- 3293

Query: 250  IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
                         +H      +P LV        G  G+  +  +A G  H   VTD G 
Sbjct: 3294 -------------DHHVR---KPTLVE-------GLRGKKII-HVAVGALHCLAVTDTGQ 3329

Query: 310  LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
            +  +G   +GQ G+G+T+   +PS    L D +V +++ G  H++
Sbjct: 3330 VYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSI 3374



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P Y+ +L  ++   IA G      +S EG++Y  G    G+LG G D     PK +  P 
Sbjct: 3036 PVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMCEPKAI--PF 3093

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLP 448
            L     K V+   G +H+  LT+DG+V SWG  + G+LG G+ I  + P L+ +      
Sbjct: 3094 LSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKRI 3153

Query: 449  RNIACGWWHTLLLAETTQI 467
            R+IACG  H+  +A   ++
Sbjct: 3154 RDIACGSGHSAAIASNGEL 3172



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
            G+ + KV  G + ++ L+  G V+ WG G   +LG G+    V  P  +  L+       
Sbjct: 4238 GLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKVAALQ------- 4289

Query: 271  RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                         GK     +  IA G  H    +D G + T+G    GQ G G+T+   
Sbjct: 4290 -------------GKK----IISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALH 4332

Query: 331  RPSYASSLMDIQVEQIAAGLWHTV 354
            RP    +L   ++ ++A G  HT+
Sbjct: 4333 RPRLVHALQGKKITRVACGSAHTL 4356



 Score = 44.7 bits (104), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 77/218 (35%), Gaps = 70/218 (32%)

Query: 56   CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
            CG G    L  ++   + +WG  D     Y   G+ G      PL  ++     VVK   
Sbjct: 4192 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPLKIDSLAGLGVVKVEC 4246

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G    V++T +G VYTWG                 G + +   G                
Sbjct: 4247 GSQFSVALTRSGAVYTWG----------------KGDYHRLGHG---------------- 4274

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
              + V + RK ++ +                        G KI  +A G  H +  SD G
Sbjct: 4275 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDKG 4310

Query: 232  QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
            +V+ WG   EGQLG G+    +  P L+    HA  GK
Sbjct: 4311 EVFTWGDNDEGQLGDGT-TSALHRPRLV----HALQGK 4343



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 9/78 (11%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
           CG G    L  + SG + +WG  D     Y   G+ G    +TP+      + +VVK   
Sbjct: 679 CGSGDSQTLCVTASGIVFSWGDGD-----YGKLGRGGTDGSKTPKIVDKLLDINVVKVFC 733

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G     ++T  GEVYTWG
Sbjct: 734 GSQFSAALTAHGEVYTWG 751


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 145/278 (52%), Gaps = 38/278 (13%)

Query: 194  SGDEFFTLSPCLVTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
            + D+ +   P +++   G  +T++        H++ L++ G+V+ WG G  G+LG G+  
Sbjct: 3086 NSDDLYV--PTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNE 3143

Query: 251  KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
            +    P  I  L+    G+D                    V ++ACG RHSAVVT  G L
Sbjct: 3144 RQ-RRPKQIEALQ----GED--------------------VVQLACGFRHSAVVTADGKL 3178

Query: 311  LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQ 369
             TFG G  G+ G  ST++++ P   ++L    V Q++ GL HT+ +S++G  V+ FG   
Sbjct: 3179 FTFGSGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGD 3238

Query: 370  FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            +G+LG G   A+  P+ +E   L +K  K V CGA+ S V+  DG V ++G  +   +GL
Sbjct: 3239 YGKLGAGSSTAKYYPQKVEQ--LCNKGMKKVCCGAQFSVVVACDGHVYTFGQERL--IGL 3294

Query: 430  GDSI--DRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
             DS+  +R+ P +VP + G    +IA G  H L L+ T
Sbjct: 3295 PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSST 3332



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 7/181 (3%)

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
           G S  + I  G   +  V+  G++   G G YG+ G G +N+Q  P          ++++
Sbjct: 410 GFSDAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKV 469

Query: 347 AAGLW---HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           ++      HT+ I+V+G V+ +G  ++G+LG G    +  PK+++ P+  SK     S G
Sbjct: 470 SSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLF-SKIVVSASAG 528

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            RHSA +T+DG++ +WG   +G+LG  DS  RN+P+LV  I G     +ACG  HT+ +A
Sbjct: 529 YRHSAAVTKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGV--GQVACGSSHTIAVA 586

Query: 463 E 463
           +
Sbjct: 587 Q 587



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 35/261 (13%)

Query: 203 PCLVTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
           P  + L P   I KV++      HTL ++  G+V+ WG G  G+LG G+       K++ 
Sbjct: 455 PKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQ 514

Query: 255 TPHLIPCLEHAASG--------KDRPLLV-------RQGSVNSSGKAGRSYVKEI----- 294
            P     +  A++G        KD  L         R G  +S  +   + VK+I     
Sbjct: 515 GPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVGQ 574

Query: 295 -ACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            ACG  H+ AV  D   + +FG G  G+ GHG TN   RP    +L    + ++ AG   
Sbjct: 575 VACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQS 634

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLT 411
           ++ ++  G+V+ +G      LG G  +  ++ P+ +E   L   +   +SCG  H   L+
Sbjct: 635 SLALTSAGQVFAWGCGSC--LGCGSSETTSLRPRFVED--LSITKIIDISCGDSHCLALS 690

Query: 412 EDGQVLSWGWNKYGQLGLGDS 432
            + +V +WG N  GQ G G +
Sbjct: 691 HENEVYAWGNNTMGQCGQGHT 711



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 172/449 (38%), Gaps = 83/449 (18%)

Query: 12   EKMEECKETVVYMWG-----YLPGTS-----PEKSPILSPIPARLCGGDSWKDVCGGGCG 61
            E  +E  ++ VY+WG      L GT      P  +P LS     +CG +    +   G  
Sbjct: 3012 EDWQEGGKSDVYLWGNGRYGQLAGTGTNLTVPTLAPSLSQTQQVVCGQNCSFLIQSNGVV 3071

Query: 62   FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
             A+   + G+L   G++DD     + S   G             +V +     H +++TE
Sbjct: 3072 TAVGEGQYGRL-GQGNSDDLYVPTIISAFQGYVV--------TQLVTSCGSDGHSMALTE 3122

Query: 122  AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
             GEV++WG            DFG  G    +   +   +   Q        GE+VV+   
Sbjct: 3123 TGEVFSWG----------DGDFGKLGHGNNERQRRPKQIEALQ--------GEDVVQL-- 3162

Query: 182  TSSAREESENPASGDEFF----------------TLSPCLVTLNPGVKITKVAAGGRHTL 225
                R  +   A G  F                  + P  V    G  + +V+ G  HTL
Sbjct: 3163 ACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTL 3222

Query: 226  ILS-DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            +LS D   VW +G G  G+LG GS                 ++ K  P  V Q  + + G
Sbjct: 3223 VLSLDGMAVWAFGDGDYGKLGAGS-----------------STAKYYPQKVEQ--LCNKG 3263

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  +K++ CG + S VV   G + TFG             ++  P    SL  + +E
Sbjct: 3264 ------MKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIE 3317

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             IA G  H + +S  G VY +G N  GQLG G       P L+    L+ K  K +S G 
Sbjct: 3318 DIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLITA--LQGKNIKQISAGR 3375

Query: 405  RHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
             HS+  T      + G     QLGL  S+
Sbjct: 3376 CHSSAWTTPSTSKNSGGPGNLQLGLPQSV 3404



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 41/260 (15%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR------IKMVPTPHLIPCLEHAASGKD 270
           + AG   T  +S  G V   G G  G+LGLG         K+V  PH             
Sbjct: 417 IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPH------------- 463

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
           R +     S  S G               H+  +T  G + ++G G YG+ GHG++  Q 
Sbjct: 464 RNIKKVSSSKGSDG---------------HTLAITVDGEVFSWGDGEYGKLGHGNSATQK 508

Query: 331 RPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P      L    V   +AG  H+  ++ +G +Y +G   FG+LG    Q+ N+P L++ 
Sbjct: 509 YPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHSDSQSRNMPTLVK- 567

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
              +      V+CG+ H+  + +DG+ + S+G    G+LG GD+     P ++  +HGF+
Sbjct: 568 ---DISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFI 624

Query: 448 PRNIACGWWHTLLLAETTQI 467
            R +  G   +L L    Q+
Sbjct: 625 IRKVCAGSQSSLALTSAGQV 644



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 122/314 (38%), Gaps = 64/314 (20%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAG 112
           G  G  LA +  G++ +WG  +     Y   G      + +P   +       VV A+AG
Sbjct: 474 GSDGHTLAITVDGEVFSWGDGE-----YGKLGHGNSATQKYPKIIQGPLFSKIVVSASAG 528

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           + H  +VT+ GE+YTWG            DFG  G    DS  +   +PT     S    
Sbjct: 529 YRHSAAVTKDGELYTWG----------EGDFGRLG--HSDSQSRN--MPTLVKDISG--V 572

Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
           G+       T +  ++     S           GD      P ++    G  I KV AG 
Sbjct: 573 GQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGS 632

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
           + +L L+  GQV+ WG G    LG GS                + +   RP  V   S+ 
Sbjct: 633 QSSLALTSAGQVFAWGCG--SCLGCGS----------------SETTSLRPRFVEDLSIT 674

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMD 340
                    + +I+CG  H   ++    +  +G    GQCG G T+  + RP     L  
Sbjct: 675 K--------IIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEG 726

Query: 341 IQVEQIAAGLWHTV 354
           + ++QI AG  H++
Sbjct: 727 VSIQQITAGTSHSL 740



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 11/111 (9%)

Query: 362  VYVFGGNQFGQL-GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            VY++G  ++GQL GTG +    VP L   P L   + + V CG   S ++  +G V + G
Sbjct: 3022 VYLWGNGRYGQLAGTGTNL--TVPTL--APSL--SQTQQVVCGQNCSFLIQSNGVVTAVG 3075

Query: 421  WNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI--ACGW-WHTLLLAETTQI 467
              +YG+LG G+S D  +P+++    G++   +  +CG   H++ L ET ++
Sbjct: 3076 EGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEV 3126



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           VYV+G N   QL  G  +   +PKL +        A+ +  G   +  ++ DG V + G 
Sbjct: 383 VYVWGSNSSHQLAEGTLEKILLPKLTQG----FSDAQTIEAGQYCTFSVSTDGSVKACGK 438

Query: 422 NKYGQLGLGDSIDRNIP 438
             YG+LGLGDS ++++P
Sbjct: 439 GSYGRLGLGDSNNQSLP 455


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 123/249 (49%), Gaps = 30/249 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V++GG+H L LS  G V+ WG G +G+LG G+++                   DR
Sbjct: 4030 IKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSY-----------------DR 4072

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+           G   + +IACGG HSA +T AG L T+G G YG+ GHG ++DQLR
Sbjct: 4073 PKLIED-------LLGVEII-DIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLR 4124

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L D +V  +A  +G   T+C++ +  V+ +G   +G+LG G      VP  L+ 
Sbjct: 4125 PKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVP--LKI 4182

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIHGFLP 448
              L       V CG++ S  LT  G V +WG   Y +LG G D   R    +  + G   
Sbjct: 4183 DSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4242

Query: 449  RNIACGWWH 457
             +IA G  H
Sbjct: 4243 ISIATGSLH 4251



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V +GG+H L L+  G+V+ WG G +G+LG G+ + +                 D+
Sbjct: 3048 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSL-----------------DK 3090

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K+ R  +++IACG  HSA +   G L T+G G YG+ GHG T  Q R
Sbjct: 3091 PKLIE------TLKSKR--IRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQAR 3142

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLG--------------- 374
            P    +L+  +V Q+A G     T+ ++ +G VY +G   FG+LG               
Sbjct: 3143 PKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVER 3202

Query: 375  ---TGVDQAE----------------------------------NVPKLLETPILESKRA 397
                GV Q E                                    P L+E   L  K+ 
Sbjct: 3203 LNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG--LRGKKI 3260

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     PSLV  +       ++CG  
Sbjct: 3261 VHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSS 3320

Query: 457  HTL 459
            H++
Sbjct: 3321 HSI 3323



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 171/413 (41%), Gaps = 72/413 (17%)

Query: 18   KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
            +E+ VY+WG         L G S  K P+ S + ++L      K +   GG       S+
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKG-SKIKLPVYSEVLSKL------KPIHIAGGSKTLFIVSQ 3011

Query: 69   SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
             GKL   G   + G+  L    +   P+P P  ++  + K A  +G  H +++T+ G+V+
Sbjct: 3012 EGKLYACGEGTN-GRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVF 3070

Query: 127  TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
            +WG  E           G  G     S  K   + T ++    KR  +       +++  
Sbjct: 3071 SWGEGE----------DGKLGHGNNMSLDKPKLIETLKS----KRIRDIACGSGHSAAIA 3116

Query: 187  EESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVW 234
               E              GD      P LV    G ++ +VA G R   T+ L+  G V+
Sbjct: 3117 SNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVY 3176

Query: 235  GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
             WG G  G+LG G                  + G   PL+V +  +N  G      V ++
Sbjct: 3177 SWGDGDFGKLGRG-----------------GSDGCYTPLVVER--LNGLG------VVQV 3211

Query: 295  ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
             CG + S  +T  G + T+G G Y + GHG+ +   +P+    L   ++  +A G  H +
Sbjct: 3212 ECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCL 3271

Query: 355  CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
             ++  G+VY +G N  GQ G G       P L+    LE  R   VSCG+ HS
Sbjct: 3272 AVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHE--LEDARVNRVSCGSSHS 3322



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 32/255 (12%)

Query: 214 ITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           +T +A+   G+H L L+  G V+ WG G  G+LG G  +     P LI  L         
Sbjct: 509 VTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSY-DEPKLIEALLE------- 560

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                              +  IACG  +SA ++ +G L T+G G YG+ GHG+ +D + 
Sbjct: 561 -----------------KNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMI 603

Query: 332 PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           P+  ++L    V  +A  +G   T+C++  G V+ +G   +G+LG G       PK+++ 
Sbjct: 604 PTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVD- 662

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            +L+    KV  CG++ SA LT  G+V +WG     +LG G       P ++  +     
Sbjct: 663 KLLDINVVKVF-CGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKI 721

Query: 449 RNIACGWWHTLLLAE 463
           ++++ G  H L+L E
Sbjct: 722 KDLSVGATHILVLTE 736



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 124/259 (47%), Gaps = 28/259 (10%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   +A G +   I+S  G+++  G G  G+LGLG     V  P  IP L         
Sbjct: 2994 LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNVCEPKPIPFLSQ------- 3045

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
              ++++ +V+S              GG+H+  +T  G + ++G G  G+ GHG+     +
Sbjct: 3046 -FVIKKVAVHS--------------GGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDK 3090

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P    +L   ++  IA G  H+  I+  G +Y +G  ++G+LG G    +  PKL++T  
Sbjct: 3091 PKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQT-- 3148

Query: 392  LESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
            L   R   V+CG+R   +  LT DG V SWG   +G+LG G S     P +V  ++G   
Sbjct: 3149 LVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGV 3208

Query: 449  RNIACGWWHTLLLAETTQI 467
              + CG   +L L +  ++
Sbjct: 3209 VQVECGAQFSLALTKYGEV 3227



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 114/252 (45%), Gaps = 33/252 (13%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD      P L+       I  +A G  ++  LS  G+++ WG G  G+LG G+    V 
Sbjct: 544 GDTVSYDEPKLIEALLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGN-FDDVM 602

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLT 312
            P L+  L+                       G + V  +ACG     +  VT +G + +
Sbjct: 603 IPTLVTTLK-----------------------GHTVV-HVACGSGDSQTLCVTASGIVFS 638

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G YG+ G G T+    P     L+DI V ++  G   +  ++  G VY +G     +
Sbjct: 639 WGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYR 698

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG--LG 430
           LG G ++    PK++E+  L  K+ K +S GA H  VLTED  V  WG N YGQ+   LG
Sbjct: 699 LGHGSEEHVRYPKIIES--LRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQIDPTLG 756

Query: 431 DSIDRNIPSLVP 442
             I    P+L P
Sbjct: 757 SVISE--PTLCP 766



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 29/215 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L P +V      K+  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 4117 GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG----- 4171

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G   PL +          AG   +K + CG + S  +T +GA+ T
Sbjct: 4172 ------------GSDGCKVPLKI-------DSLAGLGVIK-VECGSQFSVALTRSGAVYT 4211

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHG+ +   RP   ++L   ++  IA G  H V  S +G V+ +G N  GQ
Sbjct: 4212 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQ 4271

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            LG G   A + P+L+    L+ K+   V+CG+ H+
Sbjct: 4272 LGDGTTSALHRPRLVHA--LQGKKITRVACGSAHT 4304



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G ++GWG+   GQLG   G ++K+       PC   +A    RP+               
Sbjct: 3943 GAIYGWGHNHRGQLGGLEGPKVKLPA-----PCESLSAL---RPI--------------- 3979

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                ++A G +    VT  G + + G+G  G+ G G T+  + P+   S+  + ++++A 
Sbjct: 3980 ----QLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAV 4035

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + +S EG VY +G    G+LG G   + + PKL+E   L       ++CG  H
Sbjct: 4036 SSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIED--LLGVEIIDIACGGHH 4093

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA +T  G + +WG  +YG+LG GDS D+  P +V  +  +   ++ACG
Sbjct: 4094 SAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG 4142



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 133/340 (39%), Gaps = 71/340 (20%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
            P+  P LS    +       K     G   ALA ++ GK+ +WG  +D     L  G + 
Sbjct: 3037 PKPIPFLSQFVIK-------KVAVHSGGKHALALTQDGKVFSWGEGED---GKLGHGNNM 3086

Query: 93   ETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
               +P  + T  S  +   A G  H  ++   GE+YTWG  E          +G  G   
Sbjct: 3087 SLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGE----------YGRLGHGD 3136

Query: 151  KDSTGKQSALPTEQAPPSDKRAGEEVV------KRRKTSSAREESENPASGDEFF----- 199
              +  +   + T          G  VV      +  +T +   +    + GD  F     
Sbjct: 3137 TVTQARPKLVQT--------LVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGR 3188

Query: 200  -----TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
                   +P +V    G+ + +V  G + +L L+  G+VW WG G   +LG G+      
Sbjct: 3189 GGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGN------ 3242

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                    +H      +P LV        G  G+  V  +A G  H   VTD G +  +G
Sbjct: 3243 --------DHHVR---KPTLVE-------GLRGKKIV-HVAVGALHCLAVTDTGQVYAWG 3283

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
               +GQ G+G+T+   +PS    L D +V +++ G  H++
Sbjct: 3284 DNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSI 3323



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 5/139 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P Y+  L  ++   IA G      +S EG++Y  G    G+LG G D     PK +  P 
Sbjct: 2985 PVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPI--PF 3042

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT+DG+V SWG  + G+LG G+++  + P L+  +     
Sbjct: 3043 LSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRI 3102

Query: 449  RNIACGWWHTLLLAETTQI 467
            R+IACG  H+  +A   ++
Sbjct: 3103 RDIACGSGHSAAIASNGEL 3121



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 1/153 (0%)

Query: 307  AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            +GA+  +G    GQ G         P+   SL  ++  Q+A G      ++ +G+VY  G
Sbjct: 3942 SGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTG 4001

Query: 367  GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
                G+LG G   +  +P LLE+      +   VS G +H   L+ +G V SWG    G+
Sbjct: 4002 YGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDGK 4061

Query: 427  LGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            LG G+ +  + P L+  + G    +IACG  H+
Sbjct: 4062 LGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHS 4094



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
            G+ + KV  G + ++ L+  G V+ WG G   +LG G+    V  P  +  L+       
Sbjct: 4187 GLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKVAALQ------- 4238

Query: 271  RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                         GK     +  IA G  H    +D G + T+G    GQ G G+T+   
Sbjct: 4239 -------------GKK----IISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALH 4281

Query: 331  RPSYASSLMDIQVEQIAAGLWHTV 354
            RP    +L   ++ ++A G  HT+
Sbjct: 4282 RPRLVHALQGKKITRVACGSAHTL 4305



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 77/218 (35%), Gaps = 70/218 (32%)

Query: 56   CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
            CG G    L  ++   + +WG  D     Y   G+ G      PL  ++     V+K   
Sbjct: 4141 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPLKIDSLAGLGVIKVEC 4195

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G    V++T +G VYTWG                 G + +   G                
Sbjct: 4196 GSQFSVALTRSGAVYTWG----------------KGDYHRLGHG---------------- 4223

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
              + V + RK ++ +                        G KI  +A G  H +  SD G
Sbjct: 4224 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDKG 4259

Query: 232  QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
            +V+ WG   EGQLG G+    +  P L+    HA  GK
Sbjct: 4260 EVFTWGDNDEGQLGDGT-TSALHRPRLV----HALQGK 4292



 Score = 38.1 bits (87), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 9/78 (11%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
           CG G    L  + SG + +WG  D     Y   G+ G    +TP+      + +VVK   
Sbjct: 620 CGSGDSQTLCVTASGIVFSWGDGD-----YGKLGRGGTDGSKTPKIVDKLLDINVVKVFC 674

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G     ++T  GEVYTWG
Sbjct: 675 GSQFSAALTAHGEVYTWG 692


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 129/244 (52%), Gaps = 29/244 (11%)

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            H++ L++ G+V+ WG G  G+LG G+  +                 + R +   QG    
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHGNSDR---------------QRRPRQIEALQG---- 4136

Query: 283  SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                    V +++CG +HSAVVT  G L TFG G YG+ G G+T+++  P   ++L   Q
Sbjct: 4137 ------EEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQ 4190

Query: 343  VEQIAAGLWHTVCISVEG-RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            + Q+A GL HTV +S +G  V+ FG   +G+LG G   A++ P+ ++  IL     K V+
Sbjct: 4191 IGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVD--ILCGIGIKKVA 4248

Query: 402  CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLL 460
            CG + S  LT+DG V ++G ++   L  G + + N P  VP + G    +IA G  HTL 
Sbjct: 4249 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLA 4308

Query: 461  LAET 464
            L+ T
Sbjct: 4309 LSST 4312



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 33/261 (12%)

Query: 233  VWGWGYGGEGQLGLGSRIKMVPT--PHLIPCLEHAASGKDRPLLVR-QGSV-----NSSG 284
            V+ WG G  GQL    R  M+P   P   P  +    G++   +++  G+V      S G
Sbjct: 4002 VYLWGAGRHGQLAEAGRNVMIPAAAPSFSPA-QQVVCGQNCTFVIQANGTVLACGEGSYG 4060

Query: 285  KAGRSYVKEI-------------------ACGGR-HSAVVTDAGALLTFGWGLYGQCGHG 324
            + G+    ++                   +CG   HS  +T++G + ++G G YG+ GHG
Sbjct: 4061 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4120

Query: 325  STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
            +++ Q RP    +L   +V Q++ G  H+  ++ +G+++ FG   +G+LG G    + +P
Sbjct: 4121 NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP 4180

Query: 385  KLLETPILESKRAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLVPI 443
            +      LE  +   V+CG  H+  ++ DG ++ ++G   YG+LGLG+S  ++ P  V I
Sbjct: 4181 E--RVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDI 4238

Query: 444  H-GFLPRNIACGWWHTLLLAE 463
              G   + +ACG   ++ L +
Sbjct: 4239 LCGIGIKKVACGTQFSVALTK 4259



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 36/243 (14%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           I+S+  +V+ WG     QL  G++ K++  P L      A+S  D               
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKIL-QPKL------ASSFSD--------------- 404

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-----LRPSYASSLMD 340
                 + I  G   + V++  G++   G G YG+ G G +N+Q     L      S+  
Sbjct: 405 -----AQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           +   + + G  HT+  + EG V+ +G   +G+LG G    +  PKL++ P L+ K    V
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCV 516

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           S G RHSA +TEDG++ +WG   +G+LG GDS  RNIP+LV         ++CG  HT+ 
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DIINVGEVSCGSSHTIA 575

Query: 461 LAE 463
           L++
Sbjct: 576 LSK 578



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 156/397 (39%), Gaps = 75/397 (18%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
            P  +P  SP    +CG +    +   G   A      G+L   G++DD     + S   G
Sbjct: 4023 PAAAPSFSPAQQVVCGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4081

Query: 93   ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
                 F +     +V +     H +++TE+GEV++WG            D+G  G    D
Sbjct: 4082 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4123

Query: 153  STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
               +   +   Q        GEEVV   + S   + S    +  + FT            
Sbjct: 4124 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 4172

Query: 203  -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVP 254
                   P  VT   G +I +VA G  HT+ +S D   VW +G G  G+LGLG+      
Sbjct: 4173 NTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN------ 4226

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       ++ K  P       V+     G   +K++ACG + S  +T  G + TFG
Sbjct: 4227 -----------STAKSSP-----QKVDILCGIG---IKKVACGTQFSVALTKDGHVYTFG 4267

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
                     G   +  RP     L  + +E IA G  HT+ +S  G VY +G N  GQLG
Sbjct: 4268 QDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLG 4327

Query: 375  TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
             G       P L+   +L+ K  + +S G  HSA  T
Sbjct: 4328 LGHTNHVREPTLVT--VLQGKNVRQISAGRCHSAAWT 4362



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 110/219 (50%), Gaps = 32/219 (14%)

Query: 206 VTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           +T  P   I KV++      HTL  +  G+V+ WG G  G+LG G+              
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGN-------------- 494

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
              +S +  P L+ QG +   GK     V  ++ G RHSA VT+ G L T+G G +G+ G
Sbjct: 495 ---SSTQKYPKLI-QGPLQ--GKV----VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAE 381
           HG +N +  P+    +  I V +++ G  HT+ +S +GR V+ FGG   G+LG G     
Sbjct: 545 HGDSNSRNIPTLVKDI--INVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
             PK++E   L+    + V  G++ S  LT  GQV +WG
Sbjct: 603 YKPKVIEA--LQGMFIRKVCAGSQSSLALTSTGQVYAWG 639



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 33/224 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +  V+AG RH+  +++ G+++ WG G  G+LG G                  ++ ++
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD-----------------SNSRN 552

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            P LV+   +N         V E++CG  H+ A+  D   + +FG G  G+ GHG TN  
Sbjct: 553 IPTLVKD-IIN---------VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLE 388
            +P    +L  + + ++ AG   ++ ++  G+VY +G      LG G  +A  + PKL+E
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE 660

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
              L + R   +S G  H   L+ D +V +WG N  GQ G G+S
Sbjct: 661 E--LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 138/371 (37%), Gaps = 99/371 (26%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
           G  G  LA +  G++ +WG  D     Y   G    + + +P     P +  VV   +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           + H  +VTE GE+YTWG            DFG  G                         
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG------------------------- 544

Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
                                 GD      P LV     + + +V+ G  HT+ LS  G+
Sbjct: 545 ---------------------HGDSNSRNIPTLV--KDIINVGEVSCGSSHTIALSKDGR 581

Query: 233 -VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
            VW +G G  G+LG G   + V  P +I  L              QG           ++
Sbjct: 582 TVWSFGGGDNGKLGHGDTNR-VYKPKVIEAL--------------QG----------MFI 616

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           +++  G + S  +T  G +  +G G    CG  S    LRP     L   ++  I+ G  
Sbjct: 617 RKVCAGSQSSLALTSTGQVYAWGCGACLGCG-SSEATALRPKLIEELAATRIVDISIGDS 675

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS---A 408
           H + +S +  VY +G N  GQ G G +    + K  +   L+    + +S G  HS    
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVGGLDGIAIQQISAGTSHSLAWT 734

Query: 409 VLTEDGQVLSW 419
            L  D QV++W
Sbjct: 735 ALPRDRQVVAW 745


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis
           domestica]
          Length = 4706

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLGPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I  L                    SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 MISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ DQ  P   + L  ++V  ++  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEV 731



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 133/306 (43%), Gaps = 82/306 (26%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH + L+  G+V+ WG G +G+LG  SR+                  
Sbjct: 3045 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3088

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    
Sbjct: 3089 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT 3139

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--- 383
            QL+P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+   
Sbjct: 3140 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3199

Query: 384  -------------------------------------------------PKLLETPILES 394
                                                             P+++E   L  
Sbjct: 3200 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG--LRG 3257

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
            K+   V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +AC
Sbjct: 3258 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3317

Query: 454  GWWHTL 459
            G  H++
Sbjct: 3318 GSSHSV 3323



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 122/242 (50%), Gaps = 23/242 (9%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C   AA    RP+ +  G     +V + 
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----CEALAAL---RPIQLIGGEQTLFAVTAD 4006

Query: 284  GK--AGRSY-VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
            GK  A + Y V +IACG     +  +TD   + ++G G YG+ G G ++    P    SL
Sbjct: 4007 GKVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 4066

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
              + V ++  G   +V ++  G VY +G   + +LG G D     P+ ++   L+ K+  
Sbjct: 4067 TGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVI 4124

Query: 399  VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWH 457
             ++ G+ H    TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  H
Sbjct: 4125 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4184

Query: 458  TL 459
            TL
Sbjct: 4185 TL 4186



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 106/235 (45%), Gaps = 45/235 (19%)

Query: 211  GVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            G ++  +A  +G   TL L+D   VW WG G  G+LG G                  + G
Sbjct: 4014 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDG 4056

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
               P+      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS + 
Sbjct: 4057 CKVPM-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4108

Query: 329  QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              RP     L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+ 
Sbjct: 4109 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4168

Query: 389  TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
               L+ K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4169 A--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLPTQVPM 4205



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3050

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H +++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3051 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3100

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3101 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3161 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3202

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHG+     +P     L
Sbjct: 3203 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL 3255

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3256 RGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3313

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3314 RVACGSSHSVAWT 3326



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2994

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G +   G    G+ G G ++  +  P   ++L +  V+++A 
Sbjct: 2995 -VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3053

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3054 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3111

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA +T  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3112 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 466  Q 466
            +
Sbjct: 3172 E 3172



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LVT   G+K+  V+  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VVKVRCGSQFSVALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRIT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPTAL--PGLDTKHIVGIACGPAQS 774



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4077 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4135

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4136 CTEDGEVYTWG 4146



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
           CG G    LA +E+G++ +WG  D     Y   G+ G    +TP+      +  VVK   
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G    V++T+ G+VY+WG
Sbjct: 666 GSQFSVALTKDGQVYSWG 683


>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 527

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 115/223 (51%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L+P LV+ N  G ++ +VA G  HT+ L+  G+V+ WGY   GQ+G GS     PTP  +
Sbjct: 116 LTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ-PTPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++ A                        V  IACG   S  V D+G +  +G+   
Sbjct: 175 SSCLQNKA------------------------VVNIACGQLCSMAVLDSGEIYGWGYNCN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G+  +Q  P   ++L  + V Q+A G  HT+ ++ EG VY +G N +GQLGTG  
Sbjct: 211 GQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNK 270

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             + +P L+ T   + + A+V +C   H SA  T+ GQVL WG
Sbjct: 271 CNQALPTLINTD--KERMAEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 120/249 (48%), Gaps = 28/249 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H  I +  G+V+ WG+ G  QLG G+     
Sbjct: 57  GDLQSTIEPRRIDALCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGT----- 111

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
            T H +            P LV   S N  GK     V E+ACG  H+  +T  G +  +
Sbjct: 112 -TNHGLT-----------PALV---STNLLGKR----VIEVACGSHHTIALTTDGEVFAW 152

Query: 314 GWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G GST +Q  P   SS L +  V  IA G   ++ +   G +Y +G N  GQ
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQ 212

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G +  +  P       L+      V+CG  H+  LT++G V +WG N YGQLG G+ 
Sbjct: 213 LGLGNNGNQQTP--CRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNK 270

Query: 433 IDRNIPSLV 441
            ++ +P+L+
Sbjct: 271 CNQALPTLI 279



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 96/168 (57%), Gaps = 3/168 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H A+ T  G + ++G   Y Q G+G+TN  L P+  S+ L+  +V ++A G  HT+ +
Sbjct: 84  GPHVAIATADGEVFSWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIAL 143

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    +  P+ + +  L++K    ++CG   S  + + G++
Sbjct: 144 TTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSS-CLQNKAVVNIACGQLCSMAVLDSGEI 202

Query: 417 LSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAE 463
             WG+N  GQLGLG++ ++  P  +  + G     +ACG+ HTL L +
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTD 250



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 33/225 (14%)

Query: 46  LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTE 103
           LCG        G G   A+AT++ G++ +WG     G S L +G   HG TP        
Sbjct: 71  LCGKKIVSLSYGTGPHVAIATAD-GEVFSWGH---NGYSQLGNGTTNHGLTPALVSTNLL 126

Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
              V++ A G  H +++T  GEV+ WG+              ++G     ST  Q   P 
Sbjct: 127 GKRVIEVACGSHHTIALTTDGEVFAWGYN-------------NSGQVGSGSTANQPT-PR 172

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPG 211
             +     +A   +   +  S A  +S                G+     +PC +    G
Sbjct: 173 RVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQG 232

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
           V + +VA G  HTL L+D G V+ WG    GQLG G++  + +PT
Sbjct: 233 VSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKCNQALPT 277



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 22/173 (12%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    P P R+      K V    CG   ++A  +SG++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           +  GQ  L +  + +TP         SV++ A G+AH +++T+ G VY WG         
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWG--------- 258

Query: 139 VTRDFGSAGSFQKDSTGKQ--SALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
                  A S+ +  TG +   ALPT      ++ A         TS+A+ +S
Sbjct: 259 -------ANSYGQLGTGNKCNQALPTLINTDKERMAEVAACHTSHTSAAKTQS 304


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 127/255 (49%), Gaps = 35/255 (13%)

Query: 189  SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
            S N A       LSP  +      K   V +GGRH L L+  G+V+ WG G +G+LG G+
Sbjct: 2722 SHNVAQPKPLTDLSPYFI------KKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGN 2775

Query: 249  RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
            +I                   DRP LV       S K  R  ++++ACG  HSA VT +G
Sbjct: 2776 KISY-----------------DRPKLVE------SLKCKR--IRDVACGSSHSAAVTSSG 2810

Query: 309  ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR--VYVFG 366
             L T+G G YG+ GHG    QL+P    +L   +V Q+A G      +++  R  VY +G
Sbjct: 2811 ELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWG 2870

Query: 367  GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
               FG+LG G     ++P+ +ET  L S++   V CGA+ S  L+++G+V +WG   Y +
Sbjct: 2871 DGDFGKLGKGGSDGSSLPQNVET--LNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFR 2928

Query: 427  LGLGDSIDRNIPSLV 441
            LG G       P +V
Sbjct: 2929 LGHGSDSHVRWPQVV 2943



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 134/291 (46%), Gaps = 35/291 (12%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            +P L+     V +T+VA  +GG+H L L+  G V+ WG G +G+LG GS+  +   P LI
Sbjct: 3694 TPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSK-ALCERPKLI 3752

Query: 260  PCL--EHAAS----GKDRPLLVRQGSVNS--SGKAGR--------------------SYV 291
              L  +H  S    G     +   G + +   G+ GR                      V
Sbjct: 3753 ESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNV 3812

Query: 292  KEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
             ++ACG     +  V+  G + ++G G YG+ G G ++    P    SL +  V ++  G
Sbjct: 3813 LDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECG 3872

Query: 350  LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
               +V ++  G VY +G   + +LG G +     P+ ++   L+ KR   V+ G+ H   
Sbjct: 3873 SQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGA-LQGKRVIQVAVGSLHCVA 3931

Query: 410  LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
             T+ G+V +WG N  GQLG G +     P LV  + G     +ACG  HT+
Sbjct: 3932 CTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHTV 3982



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 32/262 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
             +K   +A G +   I+S  G+V+  G G  G+LGLG     V  P  +  L        
Sbjct: 2684 NLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHS-HNVAQPKPLTDLS------- 2735

Query: 271  RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
             P  +++ +V+S              GGRH+  +T  G + ++G G  G+ GHG+     
Sbjct: 2736 -PYFIKKVAVHS--------------GGRHALALTIDGRVFSWGEGEDGKLGHGNKISYD 2780

Query: 331  RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            RP    SL   ++  +A G  H+  ++  G +Y +G  ++G+LG G    +NVP+L    
Sbjct: 2781 RPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHG----DNVPQLKPKQ 2836

Query: 391  I--LESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHG 445
            +  L  +R   V+CG+R   +  LTE   V SWG   +G+LG G S   ++P  V  ++ 
Sbjct: 2837 VRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNS 2896

Query: 446  FLPRNIACGWWHTLLLAETTQI 467
                 + CG   +L L++  ++
Sbjct: 2897 QQVIQVECGAQFSLALSKNGKV 2918



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 115/236 (48%), Gaps = 33/236 (13%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            T+   L  L P V+I     GG  TL  L+  G+V+  GYG  G+LG     + V TP L
Sbjct: 3644 TICDALTALRP-VQIV----GGEQTLFALTSDGKVYATGYGAGGRLG-IGGTESVSTPTL 3697

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            I  L+H        ++V Q +VNS              GG+H   +T +G + ++G G  
Sbjct: 3698 IETLQH--------VIVTQVAVNS--------------GGKHCLALTSSGDVFSWGEGDD 3735

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHGS     RP    SL D  V  +A G  H+ CI+  G +Y +G  ++G+LG G  
Sbjct: 3736 GKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDS 3795

Query: 379  QAENVPKLLETPILESKRAKVVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDS 432
            + +  PK +E   L       V+CG+  +  L  + DG V SWG   YG+LG G S
Sbjct: 3796 EDQLKPKKVEE--LAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGS 3849



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 113/283 (39%), Gaps = 85/283 (30%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKM------------------------------------ 252
            G + GWG+   GQLG   G+++K                                     
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGY 3678

Query: 253  -------------VPTPHLIPCLEHA--------ASGKDRPLLVRQGSVNS-----SGKA 286
                         V TP LI  L+H         + GK    L   G V S      GK 
Sbjct: 3679 GAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKL 3738

Query: 287  GR-----------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            G                   +V  +ACGG HSA +T +G L T+G G YG+ GHG + DQ
Sbjct: 3739 GHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQ 3798

Query: 330  LRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
            L+P     L    V  +A  +G   T+C+S +G V+ +G   +G+LG G       P+ +
Sbjct: 3799 LKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKI 3858

Query: 388  ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            ++  L++     V CG++ S  LT  G V +WG   Y +LG G
Sbjct: 3859 DS--LQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHG 3899



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 97/242 (40%), Gaps = 35/242 (14%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P LV      +I  VA G  H+  ++  G+++ WG G  G+LG G  +  +  P  +  L
Sbjct: 2782 PKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQL-KPKQVRAL 2840

Query: 263  EH------AASGKDRPLLVR----------QGSVNSSGKAGRS--------------YVK 292
             H      A   +D   L             G     GK G                 V 
Sbjct: 2841 SHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVI 2900

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            ++ CG + S  ++  G + T+G G Y + GHGS +    P     L D  V Q++ G  H
Sbjct: 2901 QVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALH 2960

Query: 353  TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
             + ++  G VY +G N  GQ G G       P ++    LE+     V+CG+ HS   + 
Sbjct: 2961 CIAVTDRGEVYAWGDNDHGQQGNGNTTVNRKPAIVRG--LEA--ITNVACGSSHSVAWSS 3016

Query: 413  DG 414
             G
Sbjct: 3017 TG 3018



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLT----SGKHGETPEPFPLPTEASVVKAAAGWA 114
            G  F+LA S++GK+ TWG  D     Y      S  H   P+      + +V++ + G  
Sbjct: 2905 GAQFSLALSKNGKVWTWGKGD-----YFRLGHGSDSHVRWPQVVEELADKNVIQVSVGAL 2959

Query: 115  HCVSVTEAGEVYTWG 129
            HC++VT+ GEVY WG
Sbjct: 2960 HCIAVTDRGEVYAWG 2974



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAAGWAHCV 117
            G  F++A + +G + TWG  D     +  S  H   P+      +   V++ A G  HCV
Sbjct: 3872 GSQFSVALTAAGVVYTWGKGDYHRLGH-GSEDHVRRPQAVQGALQGKRVIQVAVGSLHCV 3930

Query: 118  SVTEAGEVYTWG 129
            + T++GEV+TWG
Sbjct: 3931 ACTDSGEVFTWG 3942



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
            LA + SG + +WG  DD G+    S    E P+      +  VV  A G AH   +T +G
Sbjct: 3719 LALTSSGDVFSWGEGDD-GKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASG 3777

Query: 124  EVYTWG 129
            E+YTWG
Sbjct: 3778 ELYTWG 3783



 Score = 38.5 bits (88), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 10/96 (10%)

Query: 39   LSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
            L P       G +  DV CG G    L  S  G + +WG  D     Y   G+ G     
Sbjct: 3799 LKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGD-----YGKLGRGGSDGCK 3853

Query: 98   FPLPTE----ASVVKAAAGWAHCVSVTEAGEVYTWG 129
            FP   +    A V+K   G    V++T AG VYTWG
Sbjct: 3854 FPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWG 3889


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 128/259 (49%), Gaps = 30/259 (11%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           +K   V++GG+H + LS  G V+ WG G +G+LG G+++                   DR
Sbjct: 14  IKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSY-----------------DR 56

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P L+           G   V +IACGG HSA +T AG L T+G G YG+ GHG ++DQLR
Sbjct: 57  PKLIED-------LLGVEIV-DIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLR 108

Query: 332 PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           P    +L D +V  +A  +G   T+C++ +  V+ +G   +G+LG G      VP  L+ 
Sbjct: 109 PKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVP--LKI 166

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIHGFLP 448
             L       V CG++ S  LT  G V +WG   Y +LG G D   R    +  + G   
Sbjct: 167 DSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 226

Query: 449 RNIACGWWHTLLLAETTQI 467
            +IA G  H +  ++  ++
Sbjct: 227 ISIATGSLHCVACSDKGEV 245



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 31/234 (13%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-----RIKMVPTPH 257
           P L+    GV+I  +A GG H+  ++  G ++ WG G  G+LG G      R K+V    
Sbjct: 57  PKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQ 116

Query: 258 LIPCLEHAASGKDRPLLVRQGSVN-------SSGKAGRS-----------------YVKE 293
               ++ A    D   L      N         GK GR                   V +
Sbjct: 117 DYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVK 176

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           + CG + S  +T +GA+ T+G G Y + GHG+ +   RP   ++L   ++  IA G  H 
Sbjct: 177 VECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHC 236

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
           V  S +G V+ +G N  GQLG G   A + P+L+    L+ K+   V+CG+ H+
Sbjct: 237 VACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA--LQGKKITRVACGSAHT 288



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 104/292 (35%), Gaps = 63/292 (21%)

Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
           V  ++G  HC++++  G VY+WG            D G  G   K S  +   +      
Sbjct: 17  VAVSSGGKHCIALSSEGHVYSWG----------EGDDGKLGHGNKVSYDRPKLI------ 60

Query: 167 PSDKRAGEEVVK-------RRKTSSA-------REESENPASGDEFFTLSPCLVTLNPGV 212
             +   G E+V            +SA       +        GD    L P +V      
Sbjct: 61  --EDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDY 118

Query: 213 KITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------EH 264
           K+  VA  +G   TL ++D   VW WG G  G+LG G        P  I  L      + 
Sbjct: 119 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS-DGCKVPLKIDSLAGLGVVKV 177

Query: 265 AASGKDRPLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
               +    L R G+V + GK                           +  IA G  H  
Sbjct: 178 ECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCV 237

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
             +D G + T+G    GQ G G+T+   RP    +L   ++ ++A G  HT+
Sbjct: 238 ACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTL 289



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 77/218 (35%), Gaps = 70/218 (32%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
           CG G    L  ++   + +WG  D     Y   G+ G      PL  ++     VVK   
Sbjct: 125 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPLKIDSLAGLGVVKVEC 179

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
           G    V++T +G VYTWG                 G + +   G                
Sbjct: 180 GSQFSVALTRSGAVYTWG----------------KGDYHRLGHGTD-------------- 209

Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
             + V + RK ++ +                        G KI  +A G  H +  SD G
Sbjct: 210 --DHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDKG 243

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           +V+ WG   EGQLG G+    +  P L+    HA  GK
Sbjct: 244 EVFTWGDNDEGQLGDGT-TSALHRPRLV----HALQGK 276


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 122/249 (48%), Gaps = 30/249 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L LS  G V+ WG G +G+LG G+R+                   DR
Sbjct: 4379 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMY-----------------DR 4421

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+ +         G   V +IACGG HSA +T AG L T+G G YG+ GHG + DQL 
Sbjct: 4422 PKLIEE-------LLGTEIV-DIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT 4473

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L D +V  +A  +G   T+C++ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 4474 PKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIES 4533

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIHGFLP 448
              L       V CG++ S  LT  G + +WG   Y +LG G D   R    +  + G   
Sbjct: 4534 --LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4591

Query: 449  RNIACGWWH 457
             +IA G  H
Sbjct: 4592 ISIATGSLH 4600



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 142/329 (43%), Gaps = 84/329 (25%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD+     P L+       I K+A  +GG+H L L+  G+++ WG G +G+LG G+ + +
Sbjct: 3327 GDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSL 3386

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                             D+P L+       S K+ R  +++IACG  HSA +T +G L T
Sbjct: 3387 -----------------DKPRLIE------SLKSKR--IRDIACGSGHSAAITSSGELYT 3421

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQF 370
            +G G YG+ GHG T  Q++P    SL+  +V Q+A G     T+ ++ +G VY +G   F
Sbjct: 3422 WGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDF 3481

Query: 371  GQLGT----------------------------------------------------GVD 378
            G+LG                                                     G D
Sbjct: 3482 GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGND 3541

Query: 379  QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
                 P L+E   L  K+   V+ GA H   +T+ GQV +WG N +GQ G G +I    P
Sbjct: 3542 HHVRKPTLVEG--LRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKP 3599

Query: 439  SLV-PIHGFLPRNIACGWWHTLLLAETTQ 466
            SLV  +       ++CG  H++    T Q
Sbjct: 3600 SLVHELDDARVNRVSCGSSHSIAWVLTDQ 3628



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 28/259 (10%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   +A G +   ++S  G+++  G G  G+LGLG     V  P LIP L         
Sbjct: 3292 LKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDD-SNVCEPKLIPFLSQ------- 3343

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
              ++++ +V+S              GG+H+  +T  G + ++G G  G+ GHG++    +
Sbjct: 3344 -YMIKKMAVHS--------------GGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDK 3388

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P    SL   ++  IA G  H+  I+  G +Y +G  ++G+LG G    +  PKL+++  
Sbjct: 3389 PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQS-- 3446

Query: 392  LESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
            L  +R   V+CG+R   +  LT DG V SWG   +G+LG G S     P L+  ++G   
Sbjct: 3447 LVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV 3506

Query: 449  RNIACGWWHTLLLAETTQI 467
              I CG   +L L +  ++
Sbjct: 3507 VQIECGAQFSLALTKYGEV 3525



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 121/265 (45%), Gaps = 34/265 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD  +   P LV       IT +A G  ++ +LS  G+++ WG G  G+LG G+   +  
Sbjct: 540 GDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNV-- 597

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLT 312
              LIP L  A +G                      V  +ACG     +  VT +G + +
Sbjct: 598 ---LIPTLVTALNGH--------------------MVVHVACGSGDSQTLCVTASGIVFS 634

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G YG+ G G  +    P     L+DI V ++  G   +  ++  G VY +G  +  +
Sbjct: 635 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYR 694

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL--GLG 430
           LG G ++    PK++E  +L +K+ K +  G  H   LTED  V  WG N YGQ+   LG
Sbjct: 695 LGHGNEEHIRYPKVIE--VLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPALG 752

Query: 431 DSIDRNIPSLVP-IHGFLPRNIACG 454
             +    P+L P + G     +ACG
Sbjct: 753 TVVPE--PTLCPTLSGKNIIGLACG 775



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 32/255 (12%)

Query: 214 ITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           +T +A+   G H L L+    V+ WG G  G+LG G R+                   D 
Sbjct: 505 VTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRV-----------------WYDE 547

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P LV +  V+ +       +  IACG  +SAV++  G L T+G G YG+ GHG++++ L 
Sbjct: 548 PKLV-EALVDKN-------ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLI 599

Query: 332 PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           P+  ++L    V  +A  +G   T+C++  G V+ +G   +G+LG G       PK+++ 
Sbjct: 600 PTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDK 659

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP- 448
            +L+   AKV  CG + SA LT  G+V +WG  +  +LG G+      P ++ +      
Sbjct: 660 -LLDINVAKVY-CGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKV 717

Query: 449 RNIACGWWHTLLLAE 463
           + +  G +H L L E
Sbjct: 718 KELCVGNFHVLALTE 732



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 173/416 (41%), Gaps = 66/416 (15%)

Query: 18   KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
            + + VY+WG         L G S  K P+ S + ++L      K +   GG       S+
Sbjct: 3257 QHSAVYVWGLNDKDQLGGLKG-SKIKLPVYSEVLSKL------KPIHIAGGSKTLFVVSQ 3309

Query: 69   SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
             GKL   G   + G+  L    +   P+  P  ++  + K A  +G  H +++T+ G+++
Sbjct: 3310 EGKLYACGEGTN-GRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIF 3368

Query: 127  TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
            +WG  E           G   S   D      +L +++       +G        TSS  
Sbjct: 3369 SWGEGE-------DGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAI---TSSGE 3418

Query: 187  E------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGY 238
                   E      GD    + P LV    G ++ +VA G R   T+ L+  G V+ WG 
Sbjct: 3419 LYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGD 3478

Query: 239  GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
            G  G+LG G                  + G   PLL+ +  +N  G      V +I CG 
Sbjct: 3479 GDFGKLGRG-----------------GSDGCYTPLLIDR--LNGLG------VVQIECGA 3513

Query: 299  RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            + S  +T  G + T+G G Y + GHG+ +   +P+    L   +V  +A G  H + ++ 
Sbjct: 3514 QFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTD 3573

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA--VLTE 412
             G+VY +G N  GQ G G       P L+    L+  R   VSCG+ HS   VLT+
Sbjct: 3574 TGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE--LDDARVNRVSCGSSHSIAWVLTD 3627



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 125/253 (49%), Gaps = 31/253 (12%)

Query: 220  GGRHTLI-LSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
            GG  TL+ ++  G+V+  GYG  G+LG+G +   MVPT  L+  ++H        + V++
Sbjct: 4332 GGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPT--LLESIQH--------VFVKK 4381

Query: 278  GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
             +VNS              GG+H   ++  G + ++G G  G+ GHG+     RP     
Sbjct: 4382 VAVNS--------------GGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEE 4427

Query: 338  LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
            L+  ++  IA G  H+  I+  G +Y +G  ++G+LG G  + +  PKL+E   L+  + 
Sbjct: 4428 LLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEA--LQDYKV 4485

Query: 398  KVVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
              V+CG+  +  L  T+D  V SWG   YG+LG G S    IP  +  + G     + CG
Sbjct: 4486 IDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECG 4545

Query: 455  WWHTLLLAETTQI 467
               ++ L  +  I
Sbjct: 4546 SQFSVALTRSGAI 4558



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 46/269 (17%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L+P LV      K+  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 4466 GDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG----- 4520

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G   P+ +          AG   +K + CG + S  +T +GA+ T
Sbjct: 4521 ------------GSDGCKIPMKIE-------SLAGLGVIK-VECGSQFSVALTRSGAIYT 4560

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHG+ +   RP   ++L   ++  IA G  H V  + +G V+ +G N  GQ
Sbjct: 4561 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4620

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
            LG G   A   P+L+    L+ K+   V+CG+ H+         L+W   K  Q      
Sbjct: 4621 LGDGTTSALQRPRLVHA--LQGKKITRVACGSAHT---------LAWSTMKATQ------ 4663

Query: 433  IDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
                +P+  P+   L +++     H  L+
Sbjct: 4664 --SRMPATTPMEYDLVKDLPFPVLHNRLV 4690



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G ++GWG+   GQLG   G+++K+       P L  + S   RP+               
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKL-------PVLCESLSAL-RPV--------------- 4328

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                ++  G +    VT  G +   G+G  G+ G G T+  + P+   S+  + V+++A 
Sbjct: 4329 ----QLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAV 4384

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + +S EG VY +G    G+LG G     + PKL+E   L       ++CG  H
Sbjct: 4385 NSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEE--LLGTEIVDIACGGHH 4442

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA +T  G + +WG  +YG+LG GDS D+  P LV  +  +   ++ACG
Sbjct: 4443 SAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG 4491



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P Y+  L  ++   IA G      +S EG++Y  G    G+LG G D     PKL+  P 
Sbjct: 3283 PVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLI--PF 3340

Query: 392  LESKRAK--VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K   V  G +H+  LT+DG++ SWG  + G+LG G+S+  + P L+  +     
Sbjct: 3341 LSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRI 3400

Query: 449  RNIACGWWHT 458
            R+IACG  H+
Sbjct: 3401 RDIACGSGHS 3410



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 1/153 (0%)

Query: 307  AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            +GA+  +G    GQ G         P    SL  ++  Q+  G    + ++ +G+VY  G
Sbjct: 4291 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4350

Query: 367  GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
                G+LG G   +  VP LLE+      +   V+ G +H   L+ +G V SWG    G+
Sbjct: 4351 YGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4410

Query: 427  LGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            LG G+ +  + P L+  + G    +IACG  H+
Sbjct: 4411 LGHGNRLMYDRPKLIEELLGTEIVDIACGGHHS 4443



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 47/168 (27%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF-------------------------- 365
           P Y  ++ ++ ++Q+       + +S+ G VY+                           
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGSETQYPQRVYGFSEKPVTMIASH 511

Query: 366 ------------------GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
                             G    G+LG G     + PKL+E   L  K    ++CG+ +S
Sbjct: 512 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEA--LVDKNITFIACGSTYS 569

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
           AVL+ +G++ +WG   YG+LG G+S +  IP+LV  ++G +  ++ACG
Sbjct: 570 AVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACG 617



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A + SG + TWG  D     + T   H   P          ++  A G  HCV+
Sbjct: 4545 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4603

Query: 119  VTEAGEVYTWG 129
             T+ GEV+TWG
Sbjct: 4604 CTDKGEVFTWG 4614



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 77/218 (35%), Gaps = 70/218 (32%)

Query: 56   CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
            CG G    L  ++   + +WG  D     Y   G+ G      P+  E+     V+K   
Sbjct: 4490 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4544

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G    V++T +G +YTWG                 G + +   G                
Sbjct: 4545 GSQFSVALTRSGAIYTWG----------------KGDYHRLGHG---------------- 4572

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
              + V + RK ++ +                        G KI  +A G  H +  +D G
Sbjct: 4573 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACTDKG 4608

Query: 232  QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
            +V+ WG   EGQLG G+    +  P L+    HA  GK
Sbjct: 4609 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4641


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 524 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 582

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 583 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 622

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 623 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGR 682

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 683 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 740

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 741 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 773



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL ++D GQVW WG G  G+LG G       TP LI 
Sbjct: 637 PMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 695

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 696 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 731

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 732 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 791

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 792 KPEPAAL--PGLDTKHIVGIACGPAQS 816



 Score = 45.1 bits (105), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 701 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 759

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 760 GSTHCLALTEDSEVHSWG 777



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 559 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 615

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VT+ 
Sbjct: 616 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTDN 666

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 667 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 716

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 717 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 776

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 777 GSNDQCQHFDTLRVTK-PEPAALPGLD 802


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 103/173 (59%), Gaps = 5/173 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  ++CG  HSAVVT  G L TFG   +GQ GHG+T    +PS    L   +V  +A G 
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGR 96

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            HT+  +  G +Y FG    GQLG G  +  +VPK++E   L+ ++ K ++CG+  SA +
Sbjct: 97  NHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEG--LDVQKYKHLACGSDFSAAI 154

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           TE+G++ +WG    GQ GLG+  D  IP+ + +HG + R ++CG++H  ++ E
Sbjct: 155 TENGELYTWGSCGEGQNGLGE--DTEIPTRLHLHGKV-RMVSCGYYHMAVVTE 204



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 129/280 (46%), Gaps = 34/280 (12%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
           K+  VA G  HT+  ++ G ++ +G GG+GQLG G   +    P +I  L+     H A 
Sbjct: 88  KVYMVACGRNHTIAATESGHLYSFGCGGDGQLGHGD-AEDSHVPKIIEGLDVQKYKHLAC 146

Query: 268 GKD-RPLLVRQGSVNSSGKAG------------------RSYVKEIACGGRHSAVVTDAG 308
           G D    +   G + + G  G                     V+ ++CG  H AVVT+ G
Sbjct: 147 GSDFSAAITENGELYTWGSCGEGQNGLGEDTEIPTRLHLHGKVRMVSCGYYHMAVVTEDG 206

Query: 309 ALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L   G    G+ G  H   ++  +     S+ D QV   A G   T  ++  G VY FG
Sbjct: 207 SLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIED-QVVVAACGAEFTAVVTKNGSVYTFG 265

Query: 367 GNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
               GQLG G    E   P+ +  P+ E  +A+ VSCG   +AV+T+ G + ++G  ++G
Sbjct: 266 QGNQGQLGLGSSMMETEFPERI--PLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHG 323

Query: 426 QLGLGDSIDRNI--PSLVP-IHGFLPRNIACGWWHTLLLA 462
           +LGLGD    N   P  V   + F  + + CG  H L+ A
Sbjct: 324 KLGLGDECFSNTFKPEKVKRFNNFTVKMVTCGGCHMLVAA 363



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 13/165 (7%)

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           V ++GA+ TFG   +         D L   +   + D  V  ++ G  H+  ++  G++Y
Sbjct: 8   VPESGAVFTFGKTRFA--------DNLANKFW--IRDDAVVNLSCGDEHSAVVTANGKLY 57

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
            FG N +GQLG G  ++   P +++   L+ ++  +V+CG  H+   TE G + S+G   
Sbjct: 58  TFGCNDWGQLGHGNTKSYTKPSVVKK--LKPEKVYMVACGRNHTIAATESGHLYSFGCGG 115

Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            GQLG GD+ D ++P ++  +     +++ACG   +  + E  ++
Sbjct: 116 DGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAITENGEL 160



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 110/299 (36%), Gaps = 88/299 (29%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPLPTEASVVKAAAGWAHCV 117
           G  F+ A +E+G+L TWGS   EGQ+ L     GE  E P  L     V   + G+ H  
Sbjct: 147 GSDFSAAITENGELYTWGSC-GEGQNGL-----GEDTEIPTRLHLHGKVRMVSCGYYHMA 200

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
            VTE G +Y  G +E                      G +  L  EQ         +   
Sbjct: 201 VVTEDGSLYMCGEKE----------------------GGKLGLDHEQL--------DNTS 230

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
           + +K  S  ++    A G EF                         T +++  G V+ +G
Sbjct: 231 QLQKIKSIEDQVVVAACGAEF-------------------------TAVVTKNGSVYTFG 265

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
            G +GQLGLGS +     P  IP  E   +                        + ++CG
Sbjct: 266 QGNQGQLGLGSSMMETEFPERIPLFEKVKA------------------------RTVSCG 301

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGST--NDQLRPSYASSLMDIQVEQIAAGLWHTV 354
              +AV+T  G L TFG G +G+ G G    ++  +P       +  V+ +  G  H +
Sbjct: 302 ESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCGGCHML 360


>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 170/426 (39%), Gaps = 96/426 (22%)

Query: 53  KDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
           ++VC    G   +LA +E GKL TWG        +    K    P      +   +V+AA
Sbjct: 38  QNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAA 97

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS--FQKDSTGKQSALPTEQAPPS 168
            G  HC++V + G  Y WG  E          +G  G    +KD+TG+         PP 
Sbjct: 98  IGGWHCLAVDDQGRAYAWGGNE----------YGQCGEEPEKKDNTGR---------PP- 137

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
                     RR  +  +               +P L+       + +VAAGG H+++L+
Sbjct: 138 ----------RRDIAIPQR-------------CAPKLI-------VRQVAAGGTHSVVLT 167

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
             G VW W     GQ      I  +  P  +  L+                         
Sbjct: 168 REGHVWTW-----GQPWPPGDITQISVPVRVQGLD------------------------- 197

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
             V+ IA G  H+  + + G L  +G   YGQ G G T  + +P     L  + +  IAA
Sbjct: 198 -MVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAA 256

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G WH+  ++  G VY +G  + G+LG G +   +     +  +L  +    +SCG  HS 
Sbjct: 257 GGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSV 316

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----------IACGWWH 457
            +T DG++ S+G   +G+LG G  +    P  VPI    PR            +ACG  H
Sbjct: 317 AVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRH 376

Query: 458 TLLLAE 463
           TL L +
Sbjct: 377 TLALVQ 382



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +  +G  + GQLG G +  E    +     LES+    V  G+R+S  +TEDG++ +WGW
Sbjct: 7   IIAWGSGEDGQLGLGNN--EEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGW 64

Query: 422 NKYGQLGL-GDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           N+ G LG    +   N+PS V  +        A G WH L + +
Sbjct: 65  NQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDD 108



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 12/138 (8%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
           +  P   PIP +   G +  D+  GG   + A +++G++  WG  +     +  + K  +
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDNGEVYGWGRGEHGRLGFGDNDKSSK 291

Query: 94  -TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
             P+   L +   +V+ + G  H V+VT  G ++++G            D G  G  +K 
Sbjct: 292 MVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFG----------RGDHGRLGYGRKV 341

Query: 153 STGKQSALPTEQAPPSDK 170
           +TG+   +P +  PP  +
Sbjct: 342 TTGQPEEVPIDIPPPRGR 359


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 132/272 (48%), Gaps = 28/272 (10%)

Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 541

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I                       SGK    +V  IACG  +SA +T  G L T+G G Y
Sbjct: 542 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  PKL+E   L+      V CG++ S  LT+DGQV SWG     +LGLG      
Sbjct: 642 GSDGCKTPKLIEK--LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVR 699

Query: 437 IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P L+  + G    ++A G  H L L E +++
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----- 265
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L        
Sbjct: 2992 ALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKV 3051

Query: 266  ---ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 3052 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTD 3171

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3229

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + ++ Q+
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3142

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3143 PKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3203 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3260

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3261 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 457  HTL 459
            H++
Sbjct: 3321 HSV 3323



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4103

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4104 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4147

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4148 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGSKVP 4190

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4191 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4242

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4243 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4300

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4301 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4335



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+ + G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEA--------TNGRLGLGMSSGTVPIPRQITALSSYVVKK 3050

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H  ++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3051 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3100

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3101 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3161 TRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3202

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHGS     +P     L
Sbjct: 3203 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3255

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3256 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3313

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3314 RVACGSSHSVAWT 3326



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4005

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4006 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4065

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4066 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4126 GHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4184 SDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2994

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G + + G    G+ G G ++  +  P   ++L    V+++A 
Sbjct: 2995 -VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3111

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA LT  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTD 3171

Query: 466  Q 466
            +
Sbjct: 3172 E 3172



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 86/207 (41%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            G G+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L+SK    ++CG   S
Sbjct: 750 KPEPTAL--PGLDSKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++ +  L + +H   P+         V+  AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQ-RLGLGTEEHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 42.0 bits (97), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPTALPGLD 760



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 4043 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 4094

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   VT AG++YTWG
Sbjct: 4095 VVDVAAGGAHSACVTAAGDLYTWG 4118


>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 170/426 (39%), Gaps = 96/426 (22%)

Query: 53  KDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
           ++VC    G   +LA +E GKL TWG        +    K    P      +   +V+AA
Sbjct: 38  QNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAA 97

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS--FQKDSTGKQSALPTEQAPPS 168
            G  HC++V + G  Y WG  E          +G  G    +KD+TG+         PP 
Sbjct: 98  IGGWHCLAVDDQGRAYAWGGNE----------YGQCGEEPEKKDNTGR---------PP- 137

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
                     RR  +  +               +P L+       + +VAAGG H+++L+
Sbjct: 138 ----------RRDIAIPQR-------------CAPKLI-------VRQVAAGGTHSVVLT 167

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
             G VW W     GQ      I  +  P  +  L+                         
Sbjct: 168 REGHVWTW-----GQPWPPGDITQISVPVRVQGLD------------------------- 197

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
             V+ IA G  H+  + + G L  +G   YGQ G G T  + +P     L  + +  IAA
Sbjct: 198 -MVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAA 256

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G WH+  ++  G VY +G  + G+LG G +   +     +  +L  +    +SCG  HS 
Sbjct: 257 GGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSV 316

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----------IACGWWH 457
            +T DG++ S+G   +G+LG G  +    P  VPI    PR            +ACG  H
Sbjct: 317 AVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRH 376

Query: 458 TLLLAE 463
           TL L +
Sbjct: 377 TLALVQ 382



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +  +G  + GQLG G +  E    +     LES+    V  G+R+S  +TEDG++ +WGW
Sbjct: 7   IIAWGSGEDGQLGLGNN--EEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGW 64

Query: 422 NKYGQLGL-GDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           N+ G LG    +   N+PS V  +        A G WH L + +
Sbjct: 65  NQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDD 108



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 12/138 (8%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
           +  P   PIP +   G +  D+  GG   + A +++G++  WG  +     +  + K  +
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDNGEVYGWGRGEHGRLGFGDNDKSSK 291

Query: 94  -TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
             P+   L +   +V+ + G  H V+VT  G ++++G            D G  G  +K 
Sbjct: 292 MVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFG----------RGDHGRLGYGRKV 341

Query: 153 STGKQSALPTEQAPPSDK 170
           +TG+   +P +  PP  +
Sbjct: 342 TTGQPEEVPIDIPPPRGR 359


>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 546

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 171/408 (41%), Gaps = 56/408 (13%)

Query: 67  SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
           + S  ++ WGS +  G+    +  +  TP    LP + + V  AAG AH V++T AG V 
Sbjct: 51  AASDTILAWGS-NFFGELGNGTTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTAAGTVL 109

Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
            WG              G  G    D TG  S  P   + P+   A      R  + +  
Sbjct: 110 AWG----------DNSHGQLG----DGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALT 155

Query: 187 EESENPA-SGDEFFTL---------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
                 A  G+ F  L         +P  V L P   +T VAAG  H++ L+  G V  W
Sbjct: 156 SAGTVLAWGGNSFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALTSAGTVLAW 215

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G    GQLG G+ +                  +  P+ V             + V  +A 
Sbjct: 216 GGNPFGQLGDGTVVD-----------------RSTPVAV--------ALPPSTTVTAVAA 250

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           GG HS  +T AG +L +G   +GQ G G+  D+  P+  S    +    +AAG  H++ +
Sbjct: 251 GGNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLAL 310

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           +  G V  +G N FGQLG G     + P  +  P   +  A + +  ++HS  +T  G  
Sbjct: 311 TTAGGVLAWGNNTFGQLGDGTTTTSSTPVSVTLPAATTITA-ISARDSQHSVAMTSAGAA 369

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVPIH---GFLPRNIACGWWHTLLL 461
           LSWG N  GQLG G +  R+ P  V +H   G     IA G  H+L L
Sbjct: 370 LSWGRNLRGQLGDGTTTTRSTP--VDVHLPTGVTVTAIAAGDDHSLAL 415



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 130/329 (39%), Gaps = 45/329 (13%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           ++A + +G ++ WG  +  GQ    +G    TP    LP   +    AAG  H V++T A
Sbjct: 99  SVALTAAGTVLAWGD-NSHGQLGDGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSA 157

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
           G V  WG             FG  G  +    ST    ALP      +        V   
Sbjct: 158 GTVLAWGGNS----------FGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALT 207

Query: 181 KTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
              +      NP      G      +P  V L P   +T VAAGG H++ L+  G V  W
Sbjct: 208 SAGTVLAWGGNPFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVALTSAGTVLAW 267

Query: 237 GYGGEGQLGLGSRI-KMVPTPHLIPC---LEHAASGKDRPL-LVRQGSV-----NSSGKA 286
           G    GQLG G+ + +  PT   +P        A+G+   L L   G V     N+ G+ 
Sbjct: 268 GRNFFGQLGDGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQL 327

Query: 287 G-----------------RSYVKEIAC-GGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
           G                  + +  I+    +HS  +T AGA L++G  L GQ G G+T  
Sbjct: 328 GDGTTTTSSTPVSVTLPAATTITAISARDSQHSVAMTSAGAALSWGRNLRGQLGDGTTTT 387

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           +  P        + V  IAAG  H++ ++
Sbjct: 388 RSTPVDVHLPTGVTVTAIAAGDDHSLALT 416


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 138/275 (50%), Gaps = 36/275 (13%)

Query: 199  FTLSPCLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
            + ++P LV  LN  +K+  V +GGRH L LS  G+V+ WG G +G+LGLG+R+      H
Sbjct: 3620 YVVTPQLVQGLNNIIKVA-VNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRV-----TH 3673

Query: 258  LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
              P L  + S K                     + +IACGG HSA ++  G L T+G G 
Sbjct: 3674 SKPQLVQSLSDK--------------------CIIDIACGGFHSAAISRYGHLYTWGKGR 3713

Query: 318  YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
            YG+ GHG   D L P     L++  V ++A  +G   T+C++ +  V+ +G   +G+LG 
Sbjct: 3714 YGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGH 3773

Query: 376  GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
             + ++  +P  +E+  L  K    + CG++ S  L+ +G + +WG   Y +LG G S   
Sbjct: 3774 NISESCKLPCKIES--LSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHV 3831

Query: 436  NIPSLVPIHGFLPRNI---ACGWWHTLLLAETTQI 467
              P   P+ G   + I   + G  H L L +  ++
Sbjct: 3832 RKPK--PVSGLQGKKIVQFSTGSLHVLALTDDGEV 3864



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 107/232 (46%), Gaps = 29/232 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V +GG+H + LS  G+V  WG G +G+LG G  I  + TP LI  L         
Sbjct: 2680 IKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGD-ILTLDTPKLIDSL--------- 2729

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                          A R +   IACG  HSA +T  G L T+G G YG+ GH     Q  
Sbjct: 2730 -------------LAKRVFY--IACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHT 2774

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P      +   + Q+A G     T+ +  EG VY +G   FG+LG G       P+ +E 
Sbjct: 2775 PKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQKVER 2834

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L   R   + CGA+ S  LT  GQV +WG  +Y +LGLG       P+LV
Sbjct: 2835 --LVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLGRGEHVRRPTLV 2884



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 32/271 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            T +  L  L P     ++  G +   I+S+ G+V+  G    G+LG+    K V +P  I
Sbjct: 2618 TFNEALTALKP----IEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFCGK-VSSPRQI 2672

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            P L           +++  +V+S              GG+H+  ++  G +L++G G  G
Sbjct: 2673 PGLSQ--------FVIKTVAVHS--------------GGKHAMALSLDGKVLSWGDGEDG 2710

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            + GHG       P    SL+  +V  IA G  H+  I+ +G +Y +G  Q+G+LG   + 
Sbjct: 2711 KLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQYGRLGHSDEV 2770

Query: 380  AENVPKLLETPILESKRAKVVSCGARHSAVLTED--GQVLSWGWNKYGQLGLGDSIDRNI 437
            +++ PKL++  +   K    V+CG+R +  L  D  G V SWG   +G+LG G S     
Sbjct: 2771 SQHTPKLVKEFV--GKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCT 2828

Query: 438  PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P  V  + G     I CG   ++ L  T Q+
Sbjct: 2829 PQKVERLVGHRVVQIECGAQFSVALTATGQV 2859



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 96/217 (44%), Gaps = 33/217 (15%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L P LV       + KVA  +G   T+ ++    VW WG G  G+LG       
Sbjct: 3720 GDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHN----- 3774

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            +     +PC   + SGK                     + +I CG + S  ++  G L T
Sbjct: 3775 ISESCKLPCKIESLSGKG--------------------IIQIDCGSQFSVALSANGTLYT 3814

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHGS+    +P   S L   ++ Q + G  H + ++ +G VY +G N  GQ
Sbjct: 3815 WGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQ 3874

Query: 373  LGTGVDQAENVPKLLETPI--LESKRAKVVSCGARHS 407
            LG G       P+    PI  L+ KR + VSCG+ HS
Sbjct: 3875 LGDGTAHPIARPR----PIAALKGKRIQQVSCGSAHS 3907



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 91/215 (42%), Gaps = 29/215 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
             DE    +P LV    G  IT+VA G R   TL L   G V+ WG G  G+LG G     
Sbjct: 2767 SDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRG----- 2821

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G   P  V +         G   V +I CG + S  +T  G + T
Sbjct: 2822 ------------GSDGCCTPQKVER-------LVGHRVV-QIECGAQFSVALTATGQVWT 2861

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + G G      RP+  + L  + ++ IA G  H + +S +G VY +G N  GQ
Sbjct: 2862 WGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQ 2921

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
             G G   A   P+L+      + +   V CG+  S
Sbjct: 2922 QGNGTTNANQEPRLVTN--FNNIKINRVGCGSSQS 2954



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASG 268
            +K T+V  G +    ++  G+V+  GY   G+LG+G    +   V TP L+  L +    
Sbjct: 3577 LKPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNN---- 3632

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                  + + +VNS              GGRH   ++  G +  +G G  G+ G G+   
Sbjct: 3633 ------IIKVAVNS--------------GGRHCLALSTTGEVYAWGDGDDGKLGLGNRVT 3672

Query: 329  QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              +P    SL D  +  IA G +H+  IS  G +Y +G  ++G+LG G  +    PKL++
Sbjct: 3673 HSKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQ 3732

Query: 389  TPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLG 428
              I  +     V+CG+    +  +T D  V SWG   YG+LG
Sbjct: 3733 GLI--NYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLG 3772



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 130/338 (38%), Gaps = 73/338 (21%)

Query: 31   TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
            +SP + P LS    +     S       G   A+A S  GK+++WG  +D        GK
Sbjct: 2667 SSPRQIPGLSQFVIKTVAVHS-------GGKHAMALSLDGKVLSWGDGED--------GK 2711

Query: 91   HG-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
             G       +TP+         V   A G AH  ++T  GE+YTWG  +          +
Sbjct: 2712 LGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQ----------Y 2761

Query: 144  GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-NPAS-GDEFF-- 199
            G  G    D   + +  P        K   +     R   +   +SE N  S GD  F  
Sbjct: 2762 GRLG--HSDEVSQHT--PKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGK 2817

Query: 200  --------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
                      +P  V    G ++ ++  G + ++ L+  GQVW WG G   +LGLG    
Sbjct: 2818 LGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLGRG-- 2875

Query: 252  MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
                       EH      RP LV Q  + +        +  IA G  H   V+  G + 
Sbjct: 2876 -----------EHVR----RPTLVNQLKLVT--------IDHIAVGTLHCIAVSTQGDVY 2912

Query: 312  TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
             +G   +GQ G+G+TN    P   ++  +I++ ++  G
Sbjct: 2913 CWGDNDHGQQGNGTTNANQEPRLVTNFNNIKINRVGCG 2950



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 15/195 (7%)

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQL 330
            +++ Q  V++S       V+E        + +        + WGL   GQ G  + +   
Sbjct: 2556 MIINQEFVSNSSTPQFDAVQEFPPQPEVESKIRVDSEYAVYVWGLNDKGQLGGLNGSKVK 2615

Query: 331  RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT----GVDQAENVPKL 386
            RP++  +L  ++  +I  G      +S EG+V+V G +  G+LG      V     +P L
Sbjct: 2616 RPTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGL 2675

Query: 387  LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
             +  I    +   V  G +H+  L+ DG+VLSWG  + G+LG GD +  + P L  I   
Sbjct: 2676 SQFVI----KTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKL--IDSL 2729

Query: 447  LPRN---IACGWWHT 458
            L +    IACG  H+
Sbjct: 2730 LAKRVFYIACGSAHS 2744



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 7/145 (4%)

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            GQ     ++   +P    SL  ++  Q+  G      ++  G+VY  G  + G+LG G  
Sbjct: 3555 GQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPY 3614

Query: 379  QAEN----VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
              +N     P+L++   L +     V+ G RH   L+  G+V +WG    G+LGLG+ + 
Sbjct: 3615 NPKNPYVVTPQLVQG--LNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVT 3672

Query: 435  RNIPSLV-PIHGFLPRNIACGWWHT 458
             + P LV  +      +IACG +H+
Sbjct: 3673 HSKPQLVQSLSDKCIIDIACGGFHS 3697



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 87/233 (37%), Gaps = 37/233 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
            V +  V       L ++  G+V+ WG    G LG G +    PTP  I           
Sbjct: 491 NVPMKSVDVYDETYLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAF-------- 542

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                            +  V  ++CG    A VT+ G L  +G  L+      S+N   
Sbjct: 543 ----------------SKLIVVMVSCGKDFCAAVTEDGKLYMWGKILH------SSNCCY 580

Query: 331 RPSYASSLMDIQVEQIAAG--LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            P    S+ +  V +++ G  + +T+ +S EG V+ F   ++     G D  +    ++ 
Sbjct: 581 TPELVKSISEWHVSKVSCGSSINNTLALSREGYVFSF---EYRNSDRGCD--DKSLNVIP 635

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           + I+       + C    +AV+     V +WG      LG  +S   N P  V
Sbjct: 636 SMIVFDYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNRPKEV 688



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 9/75 (12%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLT----SGKHGETPEPFPLPTEASVVKAAAGWA 114
            G  F++A S +G L TWG  D     Y      S +H   P+P        +V+ + G  
Sbjct: 3799 GSQFSVALSANGTLYTWGKGD-----YFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSL 3853

Query: 115  HCVSVTEAGEVYTWG 129
            H +++T+ GEVY WG
Sbjct: 3854 HVLALTDDGEVYAWG 3868



 Score = 39.3 bits (90), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)

Query: 64  LATSESGKLITWGS----ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
           LA ++ G++ +WG     A   GQ Y        TPEP    ++  VV  + G   C +V
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKY----SSFPTPEPIVAFSKLIVVMVSCGKDFCAAV 560

Query: 120 TEAGEVYTWG 129
           TE G++Y WG
Sbjct: 561 TEDGKLYMWG 570


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 122/249 (48%), Gaps = 30/249 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L LS  G V+ WG G +G+LG G+R+                   DR
Sbjct: 4346 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMY-----------------DR 4388

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+ +         G   V +IACGG HSA +T AG L T+G G YG+ GHG + DQL 
Sbjct: 4389 PKLIEE-------LLGTEIV-DIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT 4440

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L D +V  +A  +G   T+C++ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 4441 PKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIES 4500

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIHGFLP 448
              L       V CG++ S  LT  G + +WG   Y +LG G D   R    +  + G   
Sbjct: 4501 --LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4558

Query: 449  RNIACGWWH 457
             +IA G  H
Sbjct: 4559 ISIATGSLH 4567



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 84/329 (25%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD+     P L+       I KVA  +GG+H L L+  G+++ WG G +G+LG G+ + +
Sbjct: 3322 GDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSL 3381

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                             D+P L+       S K+ R  +++IACG  HSA +T +G L T
Sbjct: 3382 -----------------DKPRLIE------SLKSKR--IRDIACGSGHSAAITSSGELYT 3416

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQF 370
            +G G YG+ GHG T  Q++P    SL+  +V Q+A G     T+ ++ +G VY +G   F
Sbjct: 3417 WGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDF 3476

Query: 371  GQLGT----------------------------------------------------GVD 378
            G+LG                                                     G D
Sbjct: 3477 GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGND 3536

Query: 379  QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
                 P L+E   L  K+   V+ GA H   +T+ GQV +WG N +GQ G G +I    P
Sbjct: 3537 HHVRKPTLVEG--LRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKP 3594

Query: 439  SLV-PIHGFLPRNIACGWWHTLLLAETTQ 466
            SLV  +       ++CG  H++    T Q
Sbjct: 3595 SLVHELDDARVNRVSCGSSHSIAWVLTDQ 3623



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 28/259 (10%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   +A G +   ++S  G+++  G G  G+LGLG     V  P LIP L         
Sbjct: 3287 LKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDD-SNVCEPKLIPFLSQ------- 3338

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
              ++++ +V+S              GG+H+  +T  G + ++G G  G+ GHG++    +
Sbjct: 3339 -YMIKKVAVHS--------------GGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDK 3383

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P    SL   ++  IA G  H+  I+  G +Y +G  ++G+LG G    +  PKL+++  
Sbjct: 3384 PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQS-- 3441

Query: 392  LESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
            L  +R   V+CG+R   +  LT DG V SWG   +G+LG G S     P L+  ++G   
Sbjct: 3442 LVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV 3501

Query: 449  RNIACGWWHTLLLAETTQI 467
              I CG   +L L +  ++
Sbjct: 3502 VQIECGAQFSLALTKYGEV 3520



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 36/257 (14%)

Query: 214 ITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           +T +A+   G H L L+    V+ WG G  G+LG G R+                   D 
Sbjct: 497 VTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRV-----------------WYDE 539

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P LV +  V+ +       +  IACG  +SAV++  G L T+G G YG+ GHG++++ L 
Sbjct: 540 PKLV-EALVDKN-------ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLI 591

Query: 332 PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           P+  ++L    V  +A  +G   T+C++  G V+ +G   +G+LG G       PK+++ 
Sbjct: 592 PTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDK 651

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
            +L+   AKV  CG + SA LT  G+V +WG  +  +LG G+      P ++ +    P+
Sbjct: 652 -LLDINVAKVY-CGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEV--LKPK 707

Query: 450 NI---ACGWWHTLLLAE 463
            +     G +H L L E
Sbjct: 708 KVKELCVGNFHVLALTE 724



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 121/269 (44%), Gaps = 42/269 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD  +   P LV       IT +A G  ++ +LS  G+++ WG G  G+LG G+   +  
Sbjct: 532 GDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNV-- 589

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLT 312
              LIP L  A +G                      V  +ACG     +  VT +G + +
Sbjct: 590 ---LIPTLVTALNGH--------------------MVVYVACGSGDSQTLCVTASGIVFS 626

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G YG+ G G  +    P     L+DI V ++  G   +  ++  G VY +G  +  +
Sbjct: 627 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYR 686

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G ++    PK++E  +L+ K+ K +  G  H   LTED  V  WG N YGQ      
Sbjct: 687 LGHGNEEHIRYPKVIE--VLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ------ 738

Query: 433 IDRNIPSLVPIHGFLP----RNI---ACG 454
           ID  + ++VP     P    +NI   ACG
Sbjct: 739 IDPALGTIVPEPTLCPTLSGKNIIGLACG 767



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 173/416 (41%), Gaps = 66/416 (15%)

Query: 18   KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
            + + VY+WG         L G S  K P+ S + ++L      K +   GG       S+
Sbjct: 3252 QHSAVYVWGLNDKDQLGGLKG-SKIKLPVYSEVLSKL------KPIHIAGGSKTLFVVSQ 3304

Query: 69   SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
             GKL   G   + G+  L    +   P+  P  ++  + K A  +G  H +++T+ G+++
Sbjct: 3305 EGKLYACGEGTN-GRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIF 3363

Query: 127  TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
            +WG  E           G   S   D      +L +++       +G        TSS  
Sbjct: 3364 SWGEGE-------DGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAI---TSSGE 3413

Query: 187  E------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGY 238
                   E      GD    + P LV    G ++ +VA G R   T+ L+  G V+ WG 
Sbjct: 3414 LYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGD 3473

Query: 239  GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
            G  G+LG G                  + G   PLL+ +  +N  G      V +I CG 
Sbjct: 3474 GDFGKLGRG-----------------GSDGCYTPLLIDR--LNGLG------VVQIECGA 3508

Query: 299  RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            + S  +T  G + T+G G Y + GHG+ +   +P+    L   +V  +A G  H + ++ 
Sbjct: 3509 QFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTD 3568

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA--VLTE 412
             G+VY +G N  GQ G G       P L+    L+  R   VSCG+ HS   VLT+
Sbjct: 3569 TGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE--LDDARVNRVSCGSSHSIAWVLTD 3622



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 125/253 (49%), Gaps = 31/253 (12%)

Query: 220  GGRHTLI-LSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
            GG  TL+ ++  G+V+  GYG  G+LG+G +   MVPT  L+  ++H        + V++
Sbjct: 4299 GGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPT--LLESIQH--------VFVKK 4348

Query: 278  GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
             +VNS              GG+H   ++  G + ++G G  G+ GHG+     RP     
Sbjct: 4349 VAVNS--------------GGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEE 4394

Query: 338  LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
            L+  ++  IA G  H+  I+  G +Y +G  ++G+LG G  + +  PKL+E   L+  + 
Sbjct: 4395 LLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEA--LQDYKV 4452

Query: 398  KVVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
              V+CG+  +  L  T+D  V SWG   YG+LG G S    IP  +  + G     + CG
Sbjct: 4453 IDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECG 4512

Query: 455  WWHTLLLAETTQI 467
               ++ L  +  I
Sbjct: 4513 SQFSVALTRSGAI 4525



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 46/269 (17%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L+P LV      K+  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 4433 GDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG----- 4487

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G   P+ +          AG   +K + CG + S  +T +GA+ T
Sbjct: 4488 ------------GSDGCKIPMKIE-------SLAGLGVIK-VECGSQFSVALTRSGAIYT 4527

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHG+ +   RP   ++L   ++  IA G  H V  + +G V+ +G N  GQ
Sbjct: 4528 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4587

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
            LG G   A   P+L+    L+ K+   V+CG+ H+         L+W   K  Q      
Sbjct: 4588 LGDGTTSALQRPRLVHA--LQGKKITRVACGSAHT---------LAWSTMKATQ------ 4630

Query: 433  IDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
                +P+  P+   L +++     H  L+
Sbjct: 4631 --SRMPATTPMEYDLVKDLPFPVLHNRLV 4657



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G ++GWG+   GQLG   G+++K+       P L  + S   RP+               
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKL-------PVLCESLSAL-RPV--------------- 4295

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                ++  G +    VT  G +   G+G  G+ G G T+  + P+   S+  + V+++A 
Sbjct: 4296 ----QLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAV 4351

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + +S EG VY +G    G+LG G     + PKL+E   L       ++CG  H
Sbjct: 4352 NSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEE--LLGTEIVDIACGGHH 4409

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA +T  G + +WG  +YG+LG GDS D+  P LV  +  +   ++ACG
Sbjct: 4410 SAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG 4458



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P Y+  L  ++   IA G      +S EG++Y  G    G+LG G D     PKL+  P 
Sbjct: 3278 PVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLI--PF 3335

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT+DG++ SWG  + G+LG G+S+  + P L+  +     
Sbjct: 3336 LSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRI 3395

Query: 449  RNIACGWWHT 458
            R+IACG  H+
Sbjct: 3396 RDIACGSGHS 3405



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 1/153 (0%)

Query: 307  AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            +GA+  +G    GQ G         P    SL  ++  Q+  G    + ++ +G+VY  G
Sbjct: 4258 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4317

Query: 367  GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
                G+LG G   +  VP LLE+      +   V+ G +H   L+ +G V SWG    G+
Sbjct: 4318 YGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4377

Query: 427  LGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            LG G+ +  + P L+  + G    +IACG  H+
Sbjct: 4378 LGHGNRLMYDRPKLIEELLGTEIVDIACGGHHS 4410



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 47/168 (27%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF-------------------------- 365
           P Y  ++ ++ ++Q+       + +S+ G VY+                           
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGSETQYPQRVYGFSEKPVTMIASH 503

Query: 366 ------------------GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
                             G    G+LG G     + PKL+E   L  K    ++CG+ +S
Sbjct: 504 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEA--LVDKNITFIACGSTYS 561

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
           AVL+ +G++ +WG   YG+LG G+S +  IP+LV  ++G +   +ACG
Sbjct: 562 AVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACG 609



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A + SG + TWG  D     + T   H   P          ++  A G  HCV+
Sbjct: 4512 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4570

Query: 119  VTEAGEVYTWG 129
             T+ GEV+TWG
Sbjct: 4571 CTDKGEVFTWG 4581



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 77/218 (35%), Gaps = 70/218 (32%)

Query: 56   CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
            CG G    L  ++   + +WG  D     Y   G+ G      P+  E+     V+K   
Sbjct: 4457 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4511

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G    V++T +G +YTWG                 G + +   G                
Sbjct: 4512 GSQFSVALTRSGAIYTWG----------------KGDYHRLGHG---------------- 4539

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
              + V + RK ++ +                        G KI  +A G  H +  +D G
Sbjct: 4540 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACTDKG 4575

Query: 232  QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
            +V+ WG   EGQLG G+    +  P L+    HA  GK
Sbjct: 4576 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4608


>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
          Length = 286

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 28/230 (12%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           K+  ++AG  HT+ L     V  WG G +GQLG G                     +DRP
Sbjct: 15  KVLLISAGASHTVALVAGNLVCSWGRGEDGQLGHGD-------------------AEDRP 55

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL-TFGWGLYGQCGHGSTNDQLR 331
           +     +++         +  + CG  H+   +D+  ++ ++GWG +G+ GHG+++D   
Sbjct: 56  MPTFVSALDGC------EITSVICGADHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDLFI 109

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P    +L  +Q++QIA G  H + +++ G V  +G NQ GQLG G +   + P+ ++ P 
Sbjct: 110 PHAIKTLQGLQIKQIACGDSHCLAVTINGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPA 169

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            E      VSCG RH+  +T    V SWG    GQLG GD +DRN+P L+
Sbjct: 170 EE--EVVQVSCGWRHTVAITGKSNVFSWGRGTSGQLGHGDILDRNMPVLI 217



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 14/187 (7%)

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
           R  V  I+ G  H+  +     + ++G G  GQ GHG   D+  P++ S+L   ++  + 
Sbjct: 13  RRKVLLISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVI 72

Query: 348 AGLWHTVCISVEGR--VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
            G  HT   S + R  VY +G   FG+LG G      +P  ++T  L+  + K ++CG  
Sbjct: 73  CGADHTTAYS-DSRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKT--LQGLQIKQIACGDS 129

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR-----NIACGWWHTLL 460
           H   +T +G+V SWG N+ GQLG+GD+ID + P  V     LP       ++CGW HT+ 
Sbjct: 130 HCLAVTINGEVQSWGRNQNGQLGVGDNIDHSFPQRVK----LPAEEEVVQVSCGWRHTVA 185

Query: 461 LAETTQI 467
           +   + +
Sbjct: 186 ITGKSNV 192



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 84/204 (41%), Gaps = 26/204 (12%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV-WGWGYGGEGQL 244
           R E      GD      P  V+   G +IT V  G  HT   SD   V + WG+G  G+L
Sbjct: 40  RGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICGADHTTAYSDSRLVVYSWGWGDFGRL 99

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G G+   +   PH I  L+                           +K+IACG  H   V
Sbjct: 100 GHGNSSDLF-IPHAIKTLQGL------------------------QIKQIACGDSHCLAV 134

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
           T  G + ++G    GQ G G   D   P       + +V Q++ G  HTV I+ +  V+ 
Sbjct: 135 TINGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAITGKSNVFS 194

Query: 365 FGGNQFGQLGTGVDQAENVPKLLE 388
           +G    GQLG G     N+P L+E
Sbjct: 195 WGRGTSGQLGHGDILDRNMPVLIE 218



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI 451
           + ++  ++S GA H+  L     V SWG  + GQLG GD+ DR +P+ V  + G    ++
Sbjct: 12  QRRKVLLISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSV 71

Query: 452 ACGWWHTLLLAET 464
            CG  HT   +++
Sbjct: 72  ICGADHTTAYSDS 84



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 5/112 (4%)

Query: 21  VVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
           VVY WG   +        S +  P   +   G   K +  G     LA + +G++ +WG 
Sbjct: 87  VVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQIACGD-SHCLAVTINGEVQSWGR 145

Query: 78  ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
            +  GQ  +        P+   LP E  VV+ + GW H V++T    V++WG
Sbjct: 146 -NQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAITGKSNVFSWG 196


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL P LV       I K+AA   G H L LS  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I  L                    SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 MISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ DQ  P   + L  ++V  ++  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV +WG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 133/306 (43%), Gaps = 82/306 (26%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH + L+  G+V+ WG G +G+LG  SR+                  
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3091

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    
Sbjct: 3092 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT 3142

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--- 383
            QL+P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+   
Sbjct: 3143 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3202

Query: 384  -------------------------------------------------PKLLETPILES 394
                                                             P+++E   L  
Sbjct: 3203 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG--LRG 3260

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
            K+   V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +AC
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 454  GWWHTL 459
            G  H++
Sbjct: 3321 GSSHSV 3326



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 143/357 (40%), Gaps = 84/357 (23%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG  E                      G  +  P ++  
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGNRSPCDRPR 4088

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
              +   G EVV     ++    S    +  + FT                 L P LV   
Sbjct: 4089 VIESLRGIEVVD---VAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEAL 4145

Query: 210  PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
             G ++  +A  +G   TL L+D   VW WG G  G+LG G                  + 
Sbjct: 4146 QGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSD 4188

Query: 268  GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG-WGLYGQCGHGST 326
            G   P+      ++S    G   V ++ CG + S  +T +GA+ T+  +  Y + GHGS 
Sbjct: 4189 GCKVPM-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSD 4240

Query: 327  NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
            +   RP     L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L
Sbjct: 4241 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 4300

Query: 387  LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            +    L+ K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4301 VAA--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLPTQVPM 4339



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3053

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H +++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3054 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3205

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHG+     +P     L
Sbjct: 3206 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL 3258

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3259 RGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3316

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3317 RVACGSSHSVAWT 3329



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4008

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4068

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ CI+  G ++ +G  ++G+L
Sbjct: 4069 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRL 4128

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G G  + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4129 GHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4220



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  + K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2943 NTGSLVRKKAAGLESAATIR--TKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2993

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2994 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3033

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L +  V+++A  +G  H + ++V+G+V+ +G    G+LG       + 
Sbjct: 3034 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3093

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA +T  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3094 PRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3151

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3152 LLGHRVIQVACGSRDAQTLALTDE 3175



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LVT   G+K+  V+  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           + ++ CG + S  +T  G + T+G G   +
Sbjct: 654 KLQDLD------------------------IVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPAAL--PGLDTKHIVGIACGPAQS 774



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 33/71 (46%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TW    D  +    S  H   P          V+  A G  HCV 
Sbjct: 4210 GSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4269

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4270 CTEDGEVYTWG 4280



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
           CG G    LA +E+G++ +WG  D     Y   G+ G    +TP+      +  +VK   
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 665

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G    +++T+ G+VYTWG
Sbjct: 666 GSQFSIALTKDGQVYTWG 683



 Score = 38.1 bits (87), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 4046 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 4097

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   +T AG+++TWG
Sbjct: 4098 VVDVAAGGAHSACITAAGDLFTWG 4121


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 130/263 (49%), Gaps = 32/263 (12%)

Query: 200  TLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
             + P L+     V I KVA  +GG+H L LS  G V+ WG G +G+LG G+RI       
Sbjct: 3967 VMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITY----- 4021

Query: 258  LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
                        DRP L+           G   V +IACGG HSA ++ AG L T+G G 
Sbjct: 4022 ------------DRPKLIE-------ALLGTEIV-DIACGGHHSAAISSAGWLYTWGKGR 4061

Query: 318  YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
            YG+ GHG ++DQL+P+  ++L   +V  +A  +G   T+C++ +  V+ +G   +G+LG 
Sbjct: 4062 YGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4121

Query: 376  GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSID 434
            G      VP  +E+  L       V CG++ S  LT  G V +WG   Y +LG G D   
Sbjct: 4122 GGSDGCKVPMKIES--LAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV 4179

Query: 435  RNIPSLVPIHGFLPRNIACGWWH 457
            R    +  + G    +IA G  H
Sbjct: 4180 RRPRKVSALQGKKIVSIATGSLH 4202



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 136/310 (43%), Gaps = 82/310 (26%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V +GG+H L L+  G+V+ WG G +G+LG G+R+ +                 D+
Sbjct: 3009 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSL-----------------DK 3051

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K+ R  +++IACG  HSA +   G L T+G G YG+ GHG T   L+
Sbjct: 3052 PRLIE------ALKSKR--IRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLK 3103

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTG----------VDQ 379
            P    +L+  +V Q+A G     T+ ++ +G VY +G   FG+LG G          VD+
Sbjct: 3104 PKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGSDGCYSPLPVDR 3163

Query: 380  AENV------------------------------------------PKLLETPILESKRA 397
               +                                          P L+E   L  K+ 
Sbjct: 3164 LNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEG--LRGKKV 3221

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G ++    PSLV  +       +ACG  
Sbjct: 3222 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSS 3281

Query: 457  HTLLLAETTQ 466
            H++    T Q
Sbjct: 3282 HSIAWVLTDQ 3291



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 117/246 (47%), Gaps = 30/246 (12%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
           G+H L L+  G V+ WG G  G+LG G        P +I  L       DR         
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHGDSFS-CDEPQVIEVL------SDRT-------- 554

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
                     V  IACG  +SA ++  G LLT+G G YG+ GHG  +D   P+  ++L  
Sbjct: 555 ----------VTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNG 604

Query: 341 IQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
             V  +A  +G   T+C++  G V+ +G   +G+LG G      +PK+++  +L+    K
Sbjct: 605 HTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDK-LLDQNVVK 663

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWH 457
           V  CG + SA LT  G+V +WG   + +LG G+      P LV  +     R+++ G  H
Sbjct: 664 VF-CGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLH 722

Query: 458 TLLLAE 463
            L + E
Sbjct: 723 ILAITE 728



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 118/269 (43%), Gaps = 47/269 (17%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L P +VT   G K+  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 4068 GDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG----- 4122

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G   P+ +          AG   VK + CG + S  +T +GA+ T
Sbjct: 4123 ------------GSDGCKVPMKIE-------SLAGLGVVK-VECGSQFSVALTRSGAVYT 4162

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHG+ +   RP   S+L   ++  IA G  H V  S +G VY +G N  GQ
Sbjct: 4163 WGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQ 4222

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
            LG G   A+  P+L+    L+ K    V+CG+ H+         L+W   K         
Sbjct: 4223 LGDGTTHAQQSPRLVHA--LQGKNITRVACGSAHT---------LAWSTTKATH------ 4265

Query: 433  IDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
               ++P+  P+   L +++     H  L+
Sbjct: 4266 ---SLPAATPMEYDLVKDLPFSALHNRLV 4291



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 172/427 (40%), Gaps = 88/427 (20%)

Query: 18   KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
            +   VY+WG         L G S  K P+ S + ++L      K +   GG       S+
Sbjct: 2920 QNAAVYVWGLNDKDQLGGLKG-SKIKLPVHSEVLSKL------KPIHIAGGSKTLFVVSQ 2972

Query: 69   SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
             GKL   G   + G+  L    +   P+P P  ++  + K A  +G  H +++T+ G+V+
Sbjct: 2973 EGKLYACGEGTN-GRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVF 3031

Query: 127  TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
            +WG  E           G       D      AL +++               R  +   
Sbjct: 3032 SWGEGE-------DGKLGHGNRVSLDKPRLIEALKSKRI--------------RDIACGS 3070

Query: 187  EESENPASGDEFFT-----------------LSPCLVTLNPGVKITKVAAGGR--HTLIL 227
              S   AS  E +T                 L P LV    G ++ +VA G R   T+ L
Sbjct: 3071 GHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMAL 3130

Query: 228  SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
            ++ G V+ WG G  G+LG G                  + G   PL V +  +N  G   
Sbjct: 3131 TEDGSVYSWGDGDFGKLGRG-----------------GSDGCYSPLPVDR--LNGLG--- 3168

Query: 288  RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
               V ++ CG + S  +T  G + T+G G Y + GHG+ +   RP+    L   +V  +A
Sbjct: 3169 ---VVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVA 3225

Query: 348  AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
             G  H + ++  G+VY +G N  GQ G G       P L+    LE  +   V+CG+ HS
Sbjct: 3226 VGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHN--LEDAKVNRVACGSSHS 3283

Query: 408  A--VLTE 412
               VLT+
Sbjct: 3284 IAWVLTD 3290



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 27/223 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   +A G +   ++S  G+++  G G  G+LGLG     V  P  IP L         
Sbjct: 2955 LKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDN-NNVGEPKPIPFLSQ------- 3006

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
              ++++ +V+S              GG+H+  +T  G + ++G G  G+ GHG+     +
Sbjct: 3007 -YIIKKVAVHS--------------GGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDK 3051

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P    +L   ++  IA G  H+  I+  G +Y +G  ++G+LG G       PKL++   
Sbjct: 3052 PRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDA-- 3109

Query: 392  LESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDS 432
            L  +R   V+CG+R   +  LTEDG V SWG   +G+LG G S
Sbjct: 3110 LVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGS 3152



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G ++GWG+   GQLG   G+++K+      +PC   +A    RP+               
Sbjct: 3894 GAIYGWGHNHRGQLGGLEGAKVKLP-----LPCESLSAL---RPI--------------- 3930

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                ++A G +    VT  G +   G+G  G+ G G  +  + P+   S+  + ++++A 
Sbjct: 3931 ----QLAGGEQTLFAVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAV 3986

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + +S EG VY +G    G+LG G     + PKL+E   L       ++CG  H
Sbjct: 3987 NSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEA--LLGTEIVDIACGGHH 4044

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA ++  G + +WG  +YG+LG GDS D+  P++V  + G+   ++ACG
Sbjct: 4045 SAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACG 4093



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 33/252 (13%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD F    P ++ +     +T +A G  ++  +S  G++  WG G  G+LG G     + 
Sbjct: 536 GDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHG-----IC 590

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLT 312
               IP +  A +G                      V  +ACG     +  VT++G + +
Sbjct: 591 DDISIPTVVTALNGHT--------------------VTHVACGSGDSQTLCVTNSGIVFS 630

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G YG+ G G ++    P     L+D  V ++  G   +  ++  G VY +G     +
Sbjct: 631 WGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYR 690

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL--GLG 430
           LG G ++    PKL+E   L +K+ + +S G  H   +TED  V  WG N   Q+   LG
Sbjct: 691 LGHGNEEHVRFPKLVEG--LRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSLG 748

Query: 431 DSIDRNIPSLVP 442
             +    P+L P
Sbjct: 749 AVVSE--PTLCP 758



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 1/153 (0%)

Query: 307  AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            +GA+  +G    GQ G         P    SL  ++  Q+A G      ++ +G+VY  G
Sbjct: 3893 SGAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYATG 3952

Query: 367  GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
                G+LGTG   +  VP LLE+      +   V+ G +H   L+ +G V SWG    G+
Sbjct: 3953 YGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4012

Query: 427  LGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            LG G+ I  + P L+  + G    +IACG  H+
Sbjct: 4013 LGHGNRITYDRPKLIEALLGTEIVDIACGGHHS 4045



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 10/182 (5%)

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
            V+E     R S V  +A     + WGL    Q G    +    P ++  L  ++   IA 
Sbjct: 2906 VQEQMTAQRASDVQQNAAV---YVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAG 2962

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARH 406
            G      +S EG++Y  G    G+LG G +     PK +  P L     K V+   G +H
Sbjct: 2963 GSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPI--PFLSQYIIKKVAVHSGGKH 3020

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
            +  LT+DG+V SWG  + G+LG G+ +  + P L+  +     R+IACG  H+  +A   
Sbjct: 3021 ALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNG 3080

Query: 466  QI 467
            ++
Sbjct: 3081 EL 3082



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 85/250 (34%), Gaps = 90/250 (36%)

Query: 56   CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
            CG G    L  ++   + +WG  D     Y   G+ G      P+  E+     VVK   
Sbjct: 4092 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPMKIESLAGLGVVKVEC 4146

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G    V++T +G VYTWG                 G + +   G                
Sbjct: 4147 GSQFSVALTRSGAVYTWG----------------KGDYHRLGHG---------------- 4174

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
              + V + RK S+ +                        G KI  +A G  H +  SD G
Sbjct: 4175 TDDHVRRPRKVSALQ------------------------GKKIVSIATGSLHCVACSDKG 4210

Query: 232  QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
            +V+ WG   EGQLG G+      +P L+    HA  GK+                    +
Sbjct: 4211 EVYTWGDNDEGQLGDGT-THAQQSPRLV----HALQGKN--------------------I 4245

Query: 292  KEIACGGRHS 301
              +ACG  H+
Sbjct: 4246 TRVACGSAHT 4255



 Score = 38.1 bits (87), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 18/140 (12%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF---GGNQFGQLGTGVDQAENVPKLLE 388
           P Y  ++ +I V+Q+       + +S+ G+VY+       Q+ Q   G   A++V ++  
Sbjct: 449 PFYCDAIAEIGVKQLCCTERALLILSLSGKVYMMYYGSETQYPQSVYGF--ADDVVQIAS 506

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFL 447
            P              +H   LT  G V SWG    G+LG GDS   + P ++ +     
Sbjct: 507 HP------------DGKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRT 554

Query: 448 PRNIACGWWHTLLLAETTQI 467
              IACG  ++  ++ T ++
Sbjct: 555 VTYIACGSTYSAAISSTGEL 574


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL P LV       I K+AA   G H L LS  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I  L                    SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 MISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ DQ  P   + L  ++V  ++  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV +WG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 133/306 (43%), Gaps = 82/306 (26%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH + L+  G+V+ WG G +G+LG  SR+                  
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3091

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    
Sbjct: 3092 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT 3142

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--- 383
            QL+P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+   
Sbjct: 3143 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3202

Query: 384  -------------------------------------------------PKLLETPILES 394
                                                             P+++E   L  
Sbjct: 3203 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG--LRG 3260

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
            K+   V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +AC
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 454  GWWHTL 459
            G  H++
Sbjct: 3321 GSSHSV 3326



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 144/355 (40%), Gaps = 81/355 (22%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG  E                      G  +  P ++  
Sbjct: 4047 VAVNSGGKHCLALSFEGEVYSWGEAE------------------DGKLGHGNRSPCDRPR 4088

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFF----------------TLSPCLVTLNP 210
              +   G EVV     +     +   A+GD F                  L P LV    
Sbjct: 4089 VIESLRGIEVVD--IAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQ 4146

Query: 211  GVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            G ++  +A  +G   TL L+D   VW WG G  G+LG G                  + G
Sbjct: 4147 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDG 4189

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
               P+      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS + 
Sbjct: 4190 CKVPM-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4241

Query: 329  QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              RP     L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+ 
Sbjct: 4242 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4301

Query: 389  TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
               L+ K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4302 A--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLPTQVPM 4338



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3053

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H +++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3054 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3205

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHG+     +P     L
Sbjct: 3206 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL 3258

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3259 RGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3316

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3317 RVACGSSHSVAWT 3329



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4008

Query: 284  GK----------------------------AGRSYVKEIAC--GGRHSAVVTDAGALLTF 313
            GK                                ++K++A   GG+H   ++  G + ++
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSW 4068

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  IAAG  H+ CI+  G ++ +G  ++G+L
Sbjct: 4069 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4128

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G G  + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4129 GHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4220



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  + K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2943 NTGSLVRKKAAGLESAATIR--TKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2993

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2994 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3033

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L +  V+++A  +G  H + ++V+G+V+ +G    G+LG       + 
Sbjct: 3034 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3093

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA +T  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3094 PRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3151

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3152 LLGHRVIQVACGSRDAQTLALTDE 3175



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LVT   G+K+  V+  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           + ++ CG + S  +T  G + T+G G   +
Sbjct: 654 KLQDLD------------------------IVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRIT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPAAL--PGLDTKHIVGIACGPAQS 774



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4269 CTEDGEVYTWG 4279



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
           CG G    LA +E+G++ +WG  D     Y   G+ G    +TP+      +  +VK   
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 665

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G    +++T+ G+VYTWG
Sbjct: 666 GSQFSIALTKDGQVYTWG 683


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 129/253 (50%), Gaps = 30/253 (11%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +GD   T+ P  +    G KI  ++ G G H ++ ++ G+V+ WG+    QLG G+    
Sbjct: 97  TGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT---- 152

Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
             T H L+PC               Q S N   K     V E+ACG  HS V+T  G + 
Sbjct: 153 --TNHGLVPC---------------QVSTNLVNKK----VIEVACGSHHSMVLTSDGEVY 191

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
           T+G+   GQ G GST +Q  P   +S L +  V  IA G   ++ +   G VYV+G N  
Sbjct: 192 TWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGN 251

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           GQLG G   + N P       L+  R + V+CG  H+ VLT++GQ+ +WG N YGQLG G
Sbjct: 252 GQLGLG--SSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTG 309

Query: 431 DSIDRNIPSLVPI 443
           +  +++ P+ V +
Sbjct: 310 NKSNQSYPTTVTV 322



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC V+ N    K+ +VA G  H+++L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 157 LVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-PIPRRV 215

Query: 260 -PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V + G +  +G+   
Sbjct: 216 TSCLQNKV------------------------VVNIACGQMCSMAVVENGEVYVWGYNGN 251

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG++Y +G N +GQLGTG  
Sbjct: 252 GQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNK 311

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P  +   + + +  ++ +C + H SA  T+ GQV  WG
Sbjct: 312 SNQSYPTTV--TVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 352



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T+ G + T+G   Y Q G+G+TN  L P   S+ L++ +V ++
Sbjct: 115 KKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEV 174

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G  H++ ++ +G VY +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 175 ACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRV-TSCLQNKVVVNIACGQMC 233

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  + E+G+V  WG+N  GQLGLG S ++  P  +  + G   + +ACG  HTL+L +  
Sbjct: 234 SMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEG 293

Query: 466 QI 467
           QI
Sbjct: 294 QI 295



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 96/237 (40%), Gaps = 38/237 (16%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
           GT   +S I       LCG        G G    LAT E G++ TWG       S L +G
Sbjct: 96  GTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 151

Query: 90  KHGETPEPFPLPTE---ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
                  P  + T      V++ A G  H + +T  GEVYTWG             + ++
Sbjct: 152 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNS 198

Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP-------------- 192
           G     ST  Q  +P         +    +   +  S A  E+                 
Sbjct: 199 GQVGSGSTANQ-PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 257

Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
           +SG++    +PC +    G+++ +VA G  HTL+L+D GQ++ WG    GQLG G++
Sbjct: 258 SSGNQ---PTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNK 311



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTEDG 414
           ++    V+V G N  G LGTG  Q+   PK L++  L  K+   +S G+  H  + TE+G
Sbjct: 78  VTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDS--LCGKKIACLSYGSGPHVVLATEEG 135

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLL 461
           +V +WG N Y QLG G +    +P  V  +    +   +ACG  H+++L
Sbjct: 136 EVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVL 184



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 69/175 (39%), Gaps = 26/175 (14%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           VY WGY   G     S    PIP R+      K V    CG   ++A  E+G++  WG  
Sbjct: 190 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY- 248

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
              G   L  G  G  P P  +       V + A G AH + +T+ G++Y WG       
Sbjct: 249 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG------- 299

Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
                    A S+ +  TG +S  + PT      D+           TS+A+ +S
Sbjct: 300 ---------ANSYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQS 345


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 130/275 (47%), Gaps = 37/275 (13%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRIKMV- 253
           D  F +      +  G+ ++ +A G  H L +L +   V  WG    GQLGLG ++    
Sbjct: 122 DSNFNIIKLPTLIKQGLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCH 181

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
           PTP  I  L  +      P+ V                   A G +HS V++  G L +F
Sbjct: 182 PTP--ISGLSQSI-----PVFV-------------------AAGSQHSFVLSKFGELFSF 215

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G G +G+ GHG+      P   S+L+   +  +AAGL H+  +  +G +Y +G N++GQL
Sbjct: 216 GCGTFGRLGHGNELPSFNPRPISTLVGKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQL 275

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
           G G  +   +P   +   LE      V CG  H+ VL  +G V S+G+N  GQLG+G   
Sbjct: 276 GLGTVKKHTLPN--KNKELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYT 333

Query: 434 DRNIPSLVPIHGFLPRN-----IACGWWHTLLLAE 463
           D   P+ + +   L +N     IA G++H LLL +
Sbjct: 334 DSIKPNRIDLD--LKQNDEIIDIAAGYYHVLLLTK 366



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 109/231 (47%), Gaps = 26/231 (11%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           VAAG +H+ +LS  G+++ +G G  G+LG G+ +     P   P          RP+   
Sbjct: 196 VAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNEL-----PSFNP----------RPISTL 240

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
            G           ++  +A G  HSA V   GAL T+GW  YGQ G G+      P+   
Sbjct: 241 VGK----------HIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNK 290

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
            L    + ++  G  HT+ + V G VY FG N  GQLG G       P  ++  + ++  
Sbjct: 291 ELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDE 350

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLVPIHGF 446
              ++ G  H  +LT+ G V S+G+   G LGLGD +  ++ P L+P   F
Sbjct: 351 IIDIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLMPFSHF 401



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 110/239 (46%), Gaps = 19/239 (7%)

Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD-----RPLLVRQGSVNSSG 284
            GQ++ WGY   GQ  L +        +    ++      +      P L++QG +    
Sbjct: 84  FGQLYSWGYNFYGQCALDNNHNHNNNNNNKQTVDEDDDDSNFNIIKLPTLIKQGLI---- 139

Query: 285 KAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
                 V  IACG  H+ AV+ +   +L++G   +GQ G G   ++  P+  S L     
Sbjct: 140 ------VSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIP 193

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
             +AAG  H+  +S  G ++ FG   FG+LG G +     P+ + T  L  K    V+ G
Sbjct: 194 VFVAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPIST--LVGKHIVSVAAG 251

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
             HSA +   G + +WGWN+YGQLGLG      +P+    +  F    + CG  HTL+L
Sbjct: 252 LMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVL 310



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 124/297 (41%), Gaps = 79/297 (26%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+E  + +P  ++   G  I  VAAG  H+  +   G ++ WG+   GQLGLG+  K   
Sbjct: 226 GNELPSFNPRPISTLVGKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKK--- 282

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
             H +P                    N + +  R  + ++ CG  H+ V+   G + +FG
Sbjct: 283 --HTLP--------------------NKNKELERFNIVKVVCGKNHTLVLDVNGHVYSFG 320

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ------IAAGLWHTVCISVEGRVYVFGGN 368
           + + GQ G GS  D ++P+     +D+ ++Q      IAAG +H + ++ +G VY FG  
Sbjct: 321 FNVCGQLGIGSYTDSIKPNR----IDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYI 376

Query: 369 QFGQLGTG------------------------VDQAENV--------------------P 384
             G LG G                        +D  + +                    P
Sbjct: 377 SDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKEIYGEYNSDSENDINNNNAKLPP 436

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           K++E        A  ++ G  HSA++T  G++ ++G     +LG     D+++P +V
Sbjct: 437 KVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRLGNNCQEDQDMPCIV 493



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 133/359 (37%), Gaps = 86/359 (23%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
           G   +   S+ G+L ++G       ++   G   E P   P P        +V  AAG  
Sbjct: 199 GSQHSFVLSKFGELFSFGCG-----TFGRLGHGNELPSFNPRPISTLVGKHIVSVAAGLM 253

Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
           H  +V   G +YTWGW            +G  G      T K+  LP +          +
Sbjct: 254 HSAAVDSQGALYTWGWNR----------YGQLGL----GTVKKHTLPNKNKELERFNIVK 299

Query: 175 EVVKRRKT----------SSAREESENPASGDEFFTLSPCLVTLN--PGVKITKVAAGGR 222
            V  +  T          S           G    ++ P  + L+     +I  +AAG  
Sbjct: 300 VVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYY 359

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           H L+L+  G V+ +GY  +G LGLG  +     P L+P         D        S++S
Sbjct: 360 HVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFND--------SIDS 411

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND------QLRPSYA- 335
                    KEI                       YG+    S ND      +L P    
Sbjct: 412 --------YKEI-----------------------YGEYNSDSENDINNNNAKLPPKVVE 440

Query: 336 --SSLMDIQVEQIAAGLWHTVCISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPI 391
             + + D+ V +IAAG WH+  I+  GR+Y FG G+ F +LG    + +++P ++   I
Sbjct: 441 LHNEIGDVAV-KIAAGGWHSAIITSSGRLYTFGLGDNF-RLGNNCQEDQDMPCIVNKEI 497


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 131/247 (53%), Gaps = 29/247 (11%)

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            H++ L++ G+V+ WG G  G+LG G+  +                 + R +   QG    
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDR---------------QRRPRQIEALQGE--- 4119

Query: 283  SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                    V +++CG +HSAVVT  G L TFG G YG+ G G+T+++  P   ++L   Q
Sbjct: 4120 -------EVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQ 4172

Query: 343  VEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            + Q+A GL HT+ +S +G  V+ FG   +G+LG G   A++ P+ ++  +L     K V+
Sbjct: 4173 IGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVD--VLCGIGIKKVA 4230

Query: 402  CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLL 460
            CG + S  LT+DG V ++G ++   L  G + + N P  +P+  G +  ++A G  HTL 
Sbjct: 4231 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLA 4290

Query: 461  LAETTQI 467
            LA T  +
Sbjct: 4291 LASTGDV 4297



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 34/231 (14%)

Query: 233  VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
            V+ WG G  GQL    R  MVP                            +     S  +
Sbjct: 3984 VYLWGAGRHGQLAEAGRNVMVP----------------------------AAAPSFSQAQ 4015

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL-- 350
            ++ CG   + V+   G +L  G G YG+ G G+++D    +  S+L    V Q+      
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4075

Query: 351  -WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
              H++ ++  G V+ +G   +G+LG G    +  P+ +E   L+ +    +SCG +HSAV
Sbjct: 4076 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFKHSAV 4133

Query: 410  LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            +T DG++ ++G   YG+LGLG++ ++ +P  V  + G+    +ACG  HTL
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4184



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 36/243 (14%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           I+S+  +V+ WG     QL  G++ K++  P L P    A +                  
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKIL-QPKLAPSFSDAQT------------------ 407

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-----LRPSYASSLMD 340
                   I  G   + V++  G++   G G YG+ G G +N+Q     L      S+  
Sbjct: 408 --------IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           +   + + G  HT+  + EG V+ +G   +G+LG G    +  PKL++ P L+ K    V
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCV 516

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           S G RHSA +TEDG++ +WG   +G+LG GDS  RNIP+LV     +   ++CG  HT+ 
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIA 575

Query: 461 LAE 463
           L++
Sbjct: 576 LSK 578



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 26/250 (10%)

Query: 216  KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            +V  G   T ++   G V   G G  G+LG G+   +    H++  +  A  G      V
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL----HVLTVIS-ALQG-----FV 4065

Query: 276  RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                V S G  G            HS  +T++G + ++G G YG+ GHG+++ Q RP   
Sbjct: 4066 VTQLVTSCGSDG------------HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI 4113

Query: 336  SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
             +L   +V Q++ G  H+  ++ +G+++ FG   +G+LG G    + +P+      LE  
Sbjct: 4114 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE--RVTALEGY 4171

Query: 396  RAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIAC 453
            +   V+CG  H+  ++ DG V+ ++G   YG+LGLG+S  ++ P  V +  G   + +AC
Sbjct: 4172 QIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4231

Query: 454  GWWHTLLLAE 463
            G   ++ L +
Sbjct: 4232 GTQFSVALTK 4241



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 155/397 (39%), Gaps = 75/397 (18%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
            P  +P  S     +CG +    +   G   A      G+L   G++DD     + S   G
Sbjct: 4005 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4063

Query: 93   ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
                 F +     +V +     H +++TE+GEV++WG            D+G  G    D
Sbjct: 4064 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4105

Query: 153  STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
               +   +   Q        GEEVV   + S   + S    S  + FT            
Sbjct: 4106 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4154

Query: 203  -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVP 254
                   P  VT   G +I +VA G  HTL +S D   VW +G G  G+LGLG+      
Sbjct: 4155 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN------ 4208

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       ++ K  P       V+     G   +K++ACG + S  +T  G + TFG
Sbjct: 4209 -----------STAKSSP-----QKVDVLCGIG---IKKVACGTQFSVALTKDGHVYTFG 4249

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
                     G   +  RP     L  + +E +A G  HT+ ++  G VY +G N  GQLG
Sbjct: 4250 QDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLG 4309

Query: 375  TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
             G       P L+   +L+ K  + +S G  HSA  T
Sbjct: 4310 LGHTNHVREPTLVT--VLQGKNIRQISAGRCHSAAWT 4344



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +  V+AG RH+  +++ G+++ WG G  G+LG G                  ++ ++
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD-----------------SNSRN 552

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            P LV+            S V E++CG  H+ A+  D   + +FG G  G+ GHG TN  
Sbjct: 553 IPTLVKD----------ISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLE 388
            +P    +L  + + ++ AG   ++ ++  G+VY +G      LG G  +A  + PKL+E
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE 660

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
              L + R   +S G  H   L+ D +V +WG N  GQ G G+S
Sbjct: 661 E--LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 140/371 (37%), Gaps = 99/371 (26%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
           G  G  LA +  G++ +WG  D     Y   G    + + +P     P +  VV   +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           + H  +VTE GE+YTWG            DFG  G    DS  +   +PT     S+   
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--- 562

Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
                                                    + +V+ G  HT+ LS  G+
Sbjct: 563 -----------------------------------------VGEVSCGSSHTIALSKDGR 581

Query: 233 -VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
            VW +G G  G+LG G   + V  P +I  L              QG           ++
Sbjct: 582 TVWSFGGGDNGKLGHGDTNR-VYKPKVIEAL--------------QG----------MFI 616

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           +++  G + S  +T  G +  +G G    CG  S    LRP     L   ++  I+ G  
Sbjct: 617 RKVCAGSQSSLSLTSTGQVYAWGCGACLGCG-SSEATALRPKLIEELAATRIVDISIGDS 675

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS---A 408
           H + +S +  VY +G N  GQ G G +    + K  +   L+    + +S G  HS    
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734

Query: 409 VLTEDGQVLSW 419
            L  D QV++W
Sbjct: 735 ALPRDRQVVAW 745



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 362  VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
            VY++G  + GQL    +   NV      P     +A+ V CG   + V+  +G VL+ G 
Sbjct: 3984 VYLWGAGRHGQLA---EAGRNVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGE 4038

Query: 422  NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI--ACGW-WHTLLLAETTQI 467
              YG+LG G+S D ++ +++  + GF+   +  +CG   H++ L E+ ++
Sbjct: 4039 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4088


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis
           niloticus]
          Length = 4833

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 135/273 (49%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P L+ +    KI K+AA   G+H L LS  G+V+ WG G  G+LG G     +  P 
Sbjct: 472 TLAPMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD-TTYLEEPK 530

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                  G+ N  GK    +V  +ACG  +SA +T  G L T+G G 
Sbjct: 531 MI------------------GTFN--GKQAGKHVVHVACGSTYSAAITADGELYTWGRGN 570

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ DQ  P   ++   ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 571 YGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 630

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV +WG     +LG G     
Sbjct: 631 GGSDGCKTPKLVEK--LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHV 688

Query: 436 NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L +  ++
Sbjct: 689 RYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEV 721



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 134/290 (46%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------ 264
             + + +VA G +    ++  G+++  G    G+LGLG     +P P  I  L +      
Sbjct: 2988 ALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKV 3047

Query: 265  --AASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 3048 AVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3107

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L ++G G YG+ GHG    QLRP     L+  +V Q+A G     T+ ++ 
Sbjct: 3108 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD 3167

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  NVP+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3168 EGFVFSWGDGDFGKLGRGGSEGCNVPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3225

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + +T Q+
Sbjct: 3226 WGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQV 3275



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 133/306 (43%), Gaps = 82/306 (26%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  +K   V +GGRH + L+  G+V+ WG G +G+LG  SR+                  
Sbjct: 3041 NYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3084

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L ++G G YG+ GHG    
Sbjct: 3085 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT 3135

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--- 383
            QLRP     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  NV   
Sbjct: 3136 QLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQN 3195

Query: 384  -------------------------------------------------PKLLETPILES 394
                                                             P+++E   L  
Sbjct: 3196 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG--LRG 3253

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
            K+   V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +AC
Sbjct: 3254 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3313

Query: 454  GWWHTL 459
            G  H++
Sbjct: 3314 GSSHSV 3319



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4026 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4085

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   +  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4086 SLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4145

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4146 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGS 4205

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4206 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4263

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4264 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4313



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 144/356 (40%), Gaps = 83/356 (23%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG  E                      G  +  P ++  
Sbjct: 4041 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGNRSPCDRPR 4082

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
              +   G EVV     ++    S    +  E FT                 L P LV   
Sbjct: 4083 VIESLRGVEVVD---IAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDAL 4139

Query: 210  PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
             G ++  VA  +G   TL L+D   VW WG G  G+LG G                  + 
Sbjct: 4140 QGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-----------------GSD 4182

Query: 268  GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
            G   P+ +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +
Sbjct: 4183 GCKIPMKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4234

Query: 328  DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
               RP     L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+
Sbjct: 4235 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4294

Query: 388  ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
                L+ K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4295 AA--LQGKKINRVACGSAHT---------LAWSTSKPTNAG-------KLPAQVPM 4332



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 131/269 (48%), Gaps = 34/269 (12%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            T +  L TL P   I     GG  TL  ++  G+++  GYG  G+LG     + V TP L
Sbjct: 3976 TSTEALATLRPVQLI-----GGEQTLFAVTADGKLYATGYGAGGRLG-IGGTESVSTPTL 4029

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + +R+ +VNS              GG+H   ++  G + ++G    
Sbjct: 4030 LESIQH--------VFIRKVAVNS--------------GGKHCLALSSEGEVYSWGEAED 4067

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+ +   RP    SL  ++V  IAAG  H+ CI+  G ++ +G  ++G+LG G  
Sbjct: 4068 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDS 4127

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + +  PKL++   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G S    
Sbjct: 4128 EDQLKPKLVDA--LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCK 4185

Query: 437  IPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            IP  +  + G     + CG   ++ L ++
Sbjct: 4186 IPMKIDSLTGLGVVKVECGSQFSVALTKS 4214



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     V+K 
Sbjct: 2995 AGGSKSLFAVTVEGKIYACGEA--------TNGRLGLGLSSGTIPIPRQITALSNYVIKK 3046

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H +++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3047 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3096

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P LV +  G ++ +VA G
Sbjct: 3097 RIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG 3156

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3157 SRDAQTLALTDEGFVFSWGDGDFGKLGRG-----------------GSEGCNVPQNIER- 3198

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHG+     +P     L
Sbjct: 3199 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGL 3251

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3252 RGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3309

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3310 RVACGSSHSVAWT 3322



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2957 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2990

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G +   G    G+ G G ++  +  P   ++L +  ++++A 
Sbjct: 2991 -VVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAV 3049

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3050 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3107

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA +T  G++ SWG  +YG+LG GD+  +  P LV +  G     +ACG      LA T 
Sbjct: 3108 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD 3167

Query: 466  Q 466
            +
Sbjct: 3168 E 3168



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 29/204 (14%)

Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           +P +VT   G+K+  VA  +G   TL +++ GQVW WG G  G+LG G            
Sbjct: 584 TPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG------------ 631

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
                 + G   P LV         K     + ++ CG + S  +T  G + T+G G   
Sbjct: 632 -----GSDGCKTPKLVE--------KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQ 678

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG+      P    SL   +V  +A G  H + ++ +G V  +G N   Q    +  
Sbjct: 679 RLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTLFS 738

Query: 380 AENVPKLLETPILESKRAKVVSCG 403
            +  PK L  P L SK    +SCG
Sbjct: 739 NKKQPKAL--PGLNSKHIVGISCG 760



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           D+    CG  F++A ++ G++ TWG  D++   + T  +H   P+         VV  A 
Sbjct: 649 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRYPKLLDSLQGKKVVDVAV 707

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++T+ GEV +WG
Sbjct: 708 GSTHCLALTDDGEVLSWG 725



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4204 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4262

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4263 CTEDGEVYTWG 4273



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 3954 YGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4013

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      R   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 4014 GRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 4073

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    +IA G  H+
Sbjct: 4074 NRSPCDRPRVIESLRGVEVVDIAAGGAHS 4102



 Score = 41.6 bits (96), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
           CG G    LA +E+G++ +WG  D     Y   G+ G    +TP+      +  +VK   
Sbjct: 601 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 655

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G    V++T+ G+VYTWG
Sbjct: 656 GSQFSVALTKDGQVYTWG 673


>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 561

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 163/406 (40%), Gaps = 61/406 (15%)

Query: 70  GKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
           G  + WG   D  +S L  G   +  TP    LP + ++   AAG  H ++VT AG V  
Sbjct: 60  GTGLAWG---DNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLA 116

Query: 128 WGWRE--------CVP-SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           WG             P S  V  D  +  +    + G + +L       +    G  V  
Sbjct: 117 WGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTST-GTVLAWGLNVTG 175

Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
           +    +    S            +P +V L  G  +T VAAG  H+L L+  G V  WG 
Sbjct: 176 QLYDGTTTTNSS-----------TPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGA 224

Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
              GQLG G+      TP   P         D P             AG +     A   
Sbjct: 225 NSSGQLGDGTT-----TPRSTPV------AVDLP-------------AGTTISTIAASSS 260

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            HS  VT  G +L +G    GQ G G+  ++  P          V  +A G  H++ ++ 
Sbjct: 261 SHSLAVTSTGTMLAWGANFTGQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHSLAVTS 320

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            G +  +GGN  GQLG G   + + P  ++ P         V+ GA HS  LT  G +L+
Sbjct: 321 TGTMLAWGGNGSGQLGDGSTTSSSTPVAVDLP--AGTTVTAVAGGAGHSLALTSTGTMLA 378

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----IACGWWHTL 459
           WG+N  GQLG G + +R+     PI   LP +     IA G +H+L
Sbjct: 379 WGFNTSGQLGDGTTSNRS----TPIATDLPADTTITAIAGGSFHSL 420



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 114/265 (43%), Gaps = 28/265 (10%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  V L     IT VAAG  H+L ++  G V  WG    GQLG G+      TP   P 
Sbjct: 83  TPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSSGQLGDGTT-----TPRSTPV 137

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                +G                    + V  +A G RHS  VT  G +L +G  + GQ 
Sbjct: 138 AVDLPAG--------------------TTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQL 177

Query: 322 GHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
             G +T +   P          V  +AAG  H++ ++  G V  +G N  GQLG G    
Sbjct: 178 YDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGTTTP 237

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
            + P  ++ P   +  + + +  + HS  +T  G +L+WG N  GQLG G   +R+ P  
Sbjct: 238 RSTPVAVDLPA-GTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQLGDGTITNRSTPVA 296

Query: 441 VPI-HGFLPRNIACGWWHTLLLAET 464
           V +  G     +A G  H+L +  T
Sbjct: 297 VDLPAGTTVTAVATGSGHSLAVTST 321



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 134/332 (40%), Gaps = 45/332 (13%)

Query: 31  TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL-TSG 89
           T+P  +P+   +PA    G +   V  G    +LA + +G ++ WG  +  GQ Y  T+ 
Sbjct: 130 TTPRSTPVAVDLPA----GTTVTAVAAGDR-HSLAVTSTGTVLAWG-LNVTGQLYDGTTT 183

Query: 90  KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
            +  TP    LP   +V   AAG AH +++T AG V  WG       A  +   G  G+ 
Sbjct: 184 TNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWG-------ANSSGQLGD-GTT 235

Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEE---VVKRRKTSSAREESENPASGDEFFT--LSPC 204
              ST     LP      +   +       V    T  A   +     GD   T   +P 
Sbjct: 236 TPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQLGDGTITNRSTPV 295

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
            V L  G  +T VA G  H+L ++  G +  WG  G GQLG GS                
Sbjct: 296 AVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGSTTS------------- 342

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
                  P+ V          AG + V  +A G  HS  +T  G +L +G+   GQ G G
Sbjct: 343 ----SSTPVAVDL-------PAGTT-VTAVAGGAGHSLALTSTGTMLAWGFNTSGQLGDG 390

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           +T+++  P       D  +  IA G +H++ +
Sbjct: 391 TTSNRSTPIATDLPADTTITAIAGGSFHSLAV 422



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 66/147 (44%), Gaps = 10/147 (6%)

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           Q G G+T ++  P       D  +  +AAG  H++ ++  G V  +G N  GQLG G   
Sbjct: 72  QLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSSGQLGDGTTT 131

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
             + P  ++ P         V+ G RHS  +T  G VL+WG N  GQL  G +      S
Sbjct: 132 PRSTPVAVDLP--AGTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDGTTTTN---S 186

Query: 440 LVPIHGFLPRN-----IACGWWHTLLL 461
             PI   LP       +A G  H+L L
Sbjct: 187 STPIVVDLPAGTTVTAVAAGNAHSLAL 213


>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 747

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 200/487 (41%), Gaps = 67/487 (13%)

Query: 10  ENEKMEECKETVVYMWGYL------PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA 63
           +   +    E  V+ WG+        GT+ +K+      P ++ G  S   V  G   ++
Sbjct: 59  QYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAA-----PVQVAGVASAVSVAAGDQ-YS 112

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
           LA  E+G +  WG   D     L  G      +P  +      V  A+G+AH V++   G
Sbjct: 113 LALDENGDVWAWG---DNASGQLGDGTLTPRAQPRRVSGLTQGVSLASGFAHAVALRADG 169

Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GEEVVKR 179
            V+ WG          +   GSA       T  +S +P      SD  A    G   +  
Sbjct: 170 TVWAWG-------DNRSNQLGSA-------TLTRSPVPIPVPGLSDIVAVVAGGSSSLAL 215

Query: 180 RKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
           R   +     +N     GD         V +     +T ++AG  H L L   G  W WG
Sbjct: 216 RADGTVWAWGDNRYGQLGDGTTVRRAAPVRVANLDAVTHISAGAYHALALRADGTAWAWG 275

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEH--AASGKDRPLLVRQ-----------------G 278
           Y   GQLG G+ ++    P LI   E     +G    L VR                  G
Sbjct: 276 YNAFGQLGDGTTVQRT-LPVLIGLTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTG 334

Query: 279 SVNSSG---KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
           ++ SS     AG +    +  G RHS  +   G   ++G  ++GQ G  +   ++ P   
Sbjct: 335 NLTSSAVPLHAGMTGGVTLVAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQPRMAPVQV 394

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           + L   + +  +  L HTV +   GR++ +G N  GQLG G  Q  ++P  +    + S 
Sbjct: 395 TGLALGRADATSGQL-HTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPVNLTGITS- 452

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
               VS G RH+A L  DG V SWG N+YGQLG G   DR+ P  VP + G    +IA G
Sbjct: 453 ----VSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRSTPVQVPGLTGV--TSIATG 506

Query: 455 WWHTLLL 461
            +H+L L
Sbjct: 507 DYHSLAL 513



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 120/252 (47%), Gaps = 31/252 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKD 270
           IT V++G RHT  L   G VW WG    GQLG G+R     TP  +P L      A+G  
Sbjct: 450 ITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDR-STPVQVPGLTGVTSIATGDY 508

Query: 271 RPLLVR-QGSV-----NSSGK---------------AGRSYVKEIACGGRHSAVVTDAGA 309
             L +R  G+V     N  G+               +G + +  IA GG HS  +   G 
Sbjct: 509 HSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPVQVSGLTNIVSIAAGGGHSLALRSDGT 568

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           +  FG+   GQ G+G+    + P  A  L +  V  +AAG  +++ +  +G V+ +G N 
Sbjct: 569 VWAFGYNFDGQLGNGTRTWTILPVQAVGLGN--VVSLAAGKMYSLALRADGTVWAWGYNA 626

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            GQLG G  Q   VP  L+   L +  +  ++ G  HS  L  DG V +WG+N  GQLG 
Sbjct: 627 SGQLGVGTTQGSAVP--LQVSGLSAITS--ITAGTYHSLALRSDGWVWAWGFNFEGQLGN 682

Query: 430 GDSIDRNIPSLV 441
           G S +R  P LV
Sbjct: 683 GTSDNRLTPGLV 694



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 147/380 (38%), Gaps = 51/380 (13%)

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
           +G+L  WG   D  Q  L +G    +  P P+     +   ++G  H  ++   G V++W
Sbjct: 417 NGRLWAWG---DNNQGQLGNGTQQNSSLPLPVNLTG-ITSVSSGHRHTAALRLDGTVWSW 472

Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
           G          T  +G  G   +        +P      S        +  R   +    
Sbjct: 473 G----------TNQYGQLGDGTRTDRSTPVQVPGLTGVTSIATGDYHSLALRSNGTVWGW 522

Query: 189 SENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
             N     GD         V ++    I  +AAGG H+L L   G VW +GY  +GQLG 
Sbjct: 523 GFNRYGQLGDGTTVDRTQPVQVSGLTNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGN 582

Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
           G+R     T  ++P                          G   V  +A G  +S  +  
Sbjct: 583 GTR-----TWTILPVQ----------------------AVGLGNVVSLAAGKMYSLALRA 615

Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            G +  +G+   GQ G G+T     P   S L  I    I AG +H++ +  +G V+ +G
Sbjct: 616 DGTVWAWGYNASGQLGVGTTQGSAVPLQVSGLSAI--TSITAGTYHSLALRSDGWVWAWG 673

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG G       P L    ++    A  +  G  HS  +  DG + +WG N +GQ
Sbjct: 674 FNFEGQLGNGTSDNRLTPGL----VVSMSNATAIFAGDLHSLAVRADGTLWAWGLNSHGQ 729

Query: 427 LGLGDSIDRNIPSLVPIHGF 446
           LG GD+++   P  V + G 
Sbjct: 730 LGTGDTVEAWFP--VQVQGL 747



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 107/246 (43%), Gaps = 34/246 (13%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           ++A G  H+L +   G V+ WG+   GQLG G+                    K  P+ V
Sbjct: 54  RLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGT-----------------TQDKAAPVQV 96

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                     AG +    +A G ++S  + + G +  +G    GQ G G+   + +P   
Sbjct: 97  ----------AGVASAVSVAAGDQYSLALDENGDVWAWGDNASGQLGDGTLTPRAQPRRV 146

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           S L   Q   +A+G  H V +  +G V+ +G N+  QLG+       VP  +  P L   
Sbjct: 147 SGL--TQGVSLASGFAHAVALRADGTVWAWGDNRSNQLGSATLTRSPVP--IPVPGLSDI 202

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
            A V   G   S  L  DG V +WG N+YGQLG G ++ R  P  V     +  +I+ G 
Sbjct: 203 VAVV--AGGSSSLALRADGTVWAWGDNRYGQLGDGTTVRRAAPVRVANLDAVT-HISAGA 259

Query: 456 WHTLLL 461
           +H L L
Sbjct: 260 YHALAL 265


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 130/244 (53%), Gaps = 29/244 (11%)

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            H++ L++ G+V+ WG G  G+LG G+  +                 + R +   QG    
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHGNSDR---------------QRRPRQIEALQGE--- 4126

Query: 283  SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                    V +++CG +HSAVVT  G L TFG G YG+ G G+T+++  P   ++L   Q
Sbjct: 4127 -------EVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQ 4179

Query: 343  VEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            + Q+A GL HT+ +S +G  V+ FG   +G+LG G   A++ P+ ++  +L     K V+
Sbjct: 4180 IGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVD--VLCGIGIKKVA 4237

Query: 402  CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLL 460
            CG + S  LT+DG V ++G ++   L  G + + N P  +P+  G +  ++A G  HTL 
Sbjct: 4238 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLA 4297

Query: 461  LAET 464
            LA T
Sbjct: 4298 LAST 4301



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 36/243 (14%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           I+S+  +V+ WG     QL  G++ K++  P L P    A +                  
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKIL-QPKLAPSFSDAQT------------------ 407

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-----LRPSYASSLMD 340
                   I  G   + V++  G++   G G YG+ G G +N+Q     L      S+  
Sbjct: 408 --------IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           +   + + G  HT+  + EG V+ +G   +G+LG G    +  PKL++ P L+ K    V
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCV 516

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           S G RHSA +TEDG++ +WG   +G+LG GDS  RNIP+LV     +   ++CG  HT+ 
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIA 575

Query: 461 LAE 463
           L++
Sbjct: 576 LSK 578



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 34/231 (14%)

Query: 233  VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
            V+ WG G  GQL    R  MVP                            +     S  +
Sbjct: 3991 VYLWGAGRHGQLAEAGRNVMVP----------------------------AAAPSFSQAQ 4022

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL-- 350
            ++ CG   + V+   G +L  G G YG+ G G+++D    +  S+L    V Q+      
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4082

Query: 351  -WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
              H++ ++  G V+ +G   +G+LG G    +  P+ +E   L+ +    +SCG +HSAV
Sbjct: 4083 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFKHSAV 4140

Query: 410  LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            +T DG++ ++G   YG+LGLG++ ++ +P  V  + G+    +ACG  HTL
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4191



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 26/250 (10%)

Query: 216  KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            +V  G   T ++   G V   G G  G+LG G+   +    H++  +  A  G      V
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL----HVLTVIS-ALQG-----FV 4072

Query: 276  RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                V S G  G            HS  +T++G + ++G G YG+ GHG+++ Q RP   
Sbjct: 4073 VTQLVTSCGSDG------------HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI 4120

Query: 336  SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
             +L   +V Q++ G  H+  ++ +G+++ FG   +G+LG G    + +P+      LE  
Sbjct: 4121 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE--RVTALEGY 4178

Query: 396  RAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIAC 453
            +   V+CG  H+  ++ DG V+ ++G   YG+LGLG+S  ++ P  V +  G   + +AC
Sbjct: 4179 QIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4238

Query: 454  GWWHTLLLAE 463
            G   ++ L +
Sbjct: 4239 GTQFSVALTK 4248



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 155/397 (39%), Gaps = 75/397 (18%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
            P  +P  S     +CG +    +   G   A      G+L   G++DD     + S   G
Sbjct: 4012 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4070

Query: 93   ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
                 F +     +V +     H +++TE+GEV++WG            D+G  G    D
Sbjct: 4071 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4112

Query: 153  STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
               +   +   Q        GEEVV   + S   + S    S  + FT            
Sbjct: 4113 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4161

Query: 203  -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVP 254
                   P  VT   G +I +VA G  HTL +S D   VW +G G  G+LGLG+      
Sbjct: 4162 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN------ 4215

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       ++ K  P       V+     G   +K++ACG + S  +T  G + TFG
Sbjct: 4216 -----------STAKSSP-----QKVDVLCGIG---IKKVACGTQFSVALTKDGHVYTFG 4256

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
                     G   +  RP     L  + +E +A G  HT+ ++  G VY +G N  GQLG
Sbjct: 4257 QDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLG 4316

Query: 375  TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
             G       P L+   +L+ K  + +S G  HSA  T
Sbjct: 4317 LGHTNHVREPTLVT--VLQGKNIRQISAGRCHSAAWT 4351



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +  V+AG RH+  +++ G+++ WG G  G+LG G                  ++ ++
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD-----------------SNSRN 552

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            P LV+            S V E++CG  H+ A+  D   + +FG G  G+ GHG TN  
Sbjct: 553 IPTLVKD----------ISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLE 388
            +P    +L  + + ++ AG   ++ ++  G+VY +G      LG G  +A  + PKL+E
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE 660

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
              L + R   +S G  H   L+ D +V +WG N  GQ G G+S
Sbjct: 661 E--LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 140/371 (37%), Gaps = 99/371 (26%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
           G  G  LA +  G++ +WG  D     Y   G    + + +P     P +  VV   +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           + H  +VTE GE+YTWG            DFG  G    DS  +   +PT     S+   
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--- 562

Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
                                                    + +V+ G  HT+ LS  G+
Sbjct: 563 -----------------------------------------VGEVSCGSSHTIALSKDGR 581

Query: 233 -VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
            VW +G G  G+LG G   + V  P +I  L              QG           ++
Sbjct: 582 TVWSFGGGDNGKLGHGDTNR-VYKPKVIEAL--------------QG----------MFI 616

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           +++  G + S  +T  G +  +G G    CG  S    LRP     L   ++  I+ G  
Sbjct: 617 RKVCAGSQSSLSLTSTGQVYAWGCGACLGCG-SSEATALRPKLIEELAATRIVDISIGDS 675

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS---A 408
           H + +S +  VY +G N  GQ G G +    + K  +   L+    + +S G  HS    
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734

Query: 409 VLTEDGQVLSW 419
            L  D QV++W
Sbjct: 735 ALPRDRQVVAW 745



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 362  VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
            VY++G  + GQL    +   NV      P     +A+ V CG   + V+  +G VL+ G 
Sbjct: 3991 VYLWGAGRHGQLA---EAGRNVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGE 4045

Query: 422  NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI--ACGW-WHTLLLAETTQI 467
              YG+LG G+S D ++ +++  + GF+   +  +CG   H++ L E+ ++
Sbjct: 4046 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4095


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
           familiaris]
          Length = 4837

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3142

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3203 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3260

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 457  HTL 459
            H++
Sbjct: 3321 HSV 3323



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4089

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4090 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4209

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4210 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4267

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4268 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4104

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4105 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4148

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              VA  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4149 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4191

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4192 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4243

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4244 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4301

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4302 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4336



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 150/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGK------HGETPEPFPLPTEAS-VVKA 109
             GG     A +  GK+   G A        T+G+       G  P P  +   +S VVK 
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGLSSGTVPIPRQITALSSYVVKK 3050

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H  ++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3051 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3100

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3101 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3161 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3202

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHGS     +P     L
Sbjct: 3203 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3255

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3256 RGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3313

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3314 RVACGSSHSVAWT 3326



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4006

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4007 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4066

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4067 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4127 GHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4218



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2940 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2990

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2991 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLS 3030

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3031 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3090

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3091 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDE 3172



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 130/328 (39%), Gaps = 73/328 (22%)

Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           ++VK AA     H +++   GEVY+WG              G  G       G    +P 
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536

Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
           E+    +  S K+AG+ VV      T SA   +E               + +S DE    
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594

Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI
Sbjct: 595 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             L+                           V ++ CG + S  +T  G + ++G G   
Sbjct: 653 EKLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQ 688

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +  
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRV 748

Query: 380 AENVPKLLETPILESKRAKVVSCGARHS 407
            +  P  L  P L++K    ++CG   S
Sbjct: 749 TKPEPAAL--PGLDTKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4267 CTEDGEVYTWG 4277



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPAALPGLD 760



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4055 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4107 ACVTAAGDLYTWG 4119


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 129/253 (50%), Gaps = 30/253 (11%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +GD   T+ P  +    G KI  ++ G G H ++ ++ G+V+ WG+    QLG G+    
Sbjct: 96  TGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT---- 151

Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
             T H L+PC               Q S N   K     V E+ACG  HS V+T  G + 
Sbjct: 152 --TNHGLVPC---------------QVSTNLVNKK----VIEVACGSHHSMVLTSDGEVY 190

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
           T+G+   GQ G GST +Q  P   +S L +  V  IA G   ++ +   G VYV+G N  
Sbjct: 191 TWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGN 250

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           GQLG G   + N P       L+  R + V+CG  H+ VLT++GQ+ +WG N YGQLG G
Sbjct: 251 GQLGLG--SSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTG 308

Query: 431 DSIDRNIPSLVPI 443
           +  +++ P+ V +
Sbjct: 309 NKSNQSYPTTVTV 321



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC V+ N    K+ +VA G  H+++L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 156 LVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-PIPRRV 214

Query: 260 -PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V + G +  +G+   
Sbjct: 215 TSCLQNKV------------------------VVNIACGQMCSMAVVENGEVYVWGYNGN 250

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG++Y +G N +GQLGTG  
Sbjct: 251 GQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNK 310

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P  +   + + +  ++ +C + H SA  T+ GQV  WG
Sbjct: 311 SNQSYPTTV--TVDKDRVVEIAACHSAHTSAAKTQSGQVYMWG 351



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T+ G + T+G   Y Q G+G+TN  L P   S+ L++ +V ++
Sbjct: 114 KKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEV 173

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G  H++ ++ +G VY +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 174 ACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRV-TSCLQNKVVVNIACGQMC 232

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  + E+G+V  WG+N  GQLGLG S ++  P  +  + G   + +ACG  HTL+L +  
Sbjct: 233 SMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEG 292

Query: 466 QI 467
           QI
Sbjct: 293 QI 294



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 96/237 (40%), Gaps = 38/237 (16%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
           GT   +S I       LCG        G G    LAT E G++ TWG       S L +G
Sbjct: 95  GTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 150

Query: 90  KHGETPEPFPLPTE---ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
                  P  + T      V++ A G  H + +T  GEVYTWG             + ++
Sbjct: 151 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNS 197

Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP-------------- 192
           G     ST  Q  +P         +    +   +  S A  E+                 
Sbjct: 198 GQVGSGSTANQ-PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 256

Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
           +SG++    +PC +    G+++ +VA G  HTL+L+D GQ++ WG    GQLG G++
Sbjct: 257 SSGNQ---PTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNK 310



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTEDG 414
           ++    V+V G N  G LGTG  Q+   PK L++  L  K+   +S G+  H  + TE+G
Sbjct: 77  VTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDS--LCGKKIACLSYGSGPHVVLATEEG 134

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLL 461
           +V +WG N Y QLG G +    +P  V  +    +   +ACG  H+++L
Sbjct: 135 EVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVL 183



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 69/175 (39%), Gaps = 26/175 (14%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           VY WGY   G     S    PIP R+      K V    CG   ++A  E+G++  WG  
Sbjct: 189 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY- 247

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
              G   L  G  G  P P  +       V + A G AH + +T+ G++Y WG       
Sbjct: 248 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG------- 298

Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
                    A S+ +  TG +S  + PT      D+           TS+A+ +S
Sbjct: 299 ---------ANSYGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQS 344


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Pongo abelii]
          Length = 4581

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 3774 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3833

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 3834 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3893

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 3894 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3953

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 3954 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4011

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4012 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4061



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 123/263 (46%), Gaps = 40/263 (15%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +G   T      G+V+ WG G +G+LG  SR+     P LI  L         
Sbjct: 2800 VKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRM-----PRLIEAL--------- 2845

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                         K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 2846 -------------KTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 2890

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE 388
            P     L+  +V Q+A G     T+ ++ EG V+  G     ++G G + +  N+P+ +E
Sbjct: 2891 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIE 2950

Query: 389  TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
               L  +    + CGA+ S  LT+ G V +WG   Y +LG G  +    P +V   G   
Sbjct: 2951 R--LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV--EGLRG 3006

Query: 449  RNI-AC---GWWHTLLLAETTQI 467
            + I AC   G  H L + ++ Q+
Sbjct: 3007 KKIVACSCSGALHCLAVTDSGQV 3029



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 3789 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 3848

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 3849 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 3892

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 3893 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 3935

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 3936 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 3987

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 3988 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4045

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4046 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4080



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 36/269 (13%)

Query: 202  SPC--LVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            +PC  L TL P   I     GG  TL  ++  G+++  GYG  G+LG     + V TP L
Sbjct: 3724 TPCEALATLRPVQLI-----GGEQTLFAVTADGKLYATGYGAGGRLG-IGGTESVSTPTL 3777

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + +++ +VNS              GG+H   ++  G + ++G    
Sbjct: 3778 LESIQH--------VFIKKVAVNS--------------GGKHCLALSSEGEVYSWGEAED 3815

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+LG    
Sbjct: 3816 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 3875

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G S    
Sbjct: 3876 EDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 3933

Query: 437  IPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            +P  +  + G     + CG   ++ L ++
Sbjct: 3934 VPMKIDSLTGLGVVKVECGSQFSVALTKS 3962



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 29/220 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L P +V +  G ++ +VA G R   TL L+D G V+  G G   ++G G  +K 
Sbjct: 2883 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKG 2942

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
               P  I  L                  N  G      V +I CG + S  +T +G + T
Sbjct: 2943 CNIPQNIERL------------------NGQG------VCQIECGAQFSLALTKSGVVWT 2978

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA-AGLWHTVCISVEGRVYVFGGNQFG 371
            +G G Y + GHGS     +P     L   ++   + +G  H + ++  G+VY +G N  G
Sbjct: 2979 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHG 3038

Query: 372  QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
            Q G G       P L++   LE ++   V+CG+ HS   T
Sbjct: 3039 QQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAWT 3076



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 15/193 (7%)

Query: 281  NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLR-PSYASS 337
            +  G +G S  K +A G   +A +        F WGL    Q G G  N +++ PS++ +
Sbjct: 2686 DEKGNSG-SLAKRMAAGLESAATIRTK----VFSWGLNDKDQLG-GLKNKKIKVPSFSET 2739

Query: 338  LMDIQVEQIAAGLWHTVCISVEGRVYVFG-GNQFGQLGTGVDQAE-NVPKLLETPILESK 395
            L  + V Q+A G      ++VEG+VY  G   ++   G G+      +P    T +    
Sbjct: 2740 LSALNVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYV 2799

Query: 396  RAKV-VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACG 454
              KV V  G   +     DG+V SWG    G+LG    + R I +L        R+IACG
Sbjct: 2800 VKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRMPRLIEALKTKR---IRDIACG 2856

Query: 455  WWHTLLLAETTQI 467
              H+  L  + ++
Sbjct: 2857 SSHSAALTSSGEL 2869



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 3952 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4010

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4011 CTEDGEVYTWG 4021



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 3702 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3761

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      +   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 3762 GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 3821

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    ++A G  H+
Sbjct: 3822 NRSPCDRPRVIESLRGIEVVDVAAGGAHS 3850



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 12/82 (14%)

Query: 55   VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFP-LPTEASVV 107
            VC   CG  F+LA ++SG + TWG  D     Y   G     H   P+    L  +  V 
Sbjct: 2957 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVA 3011

Query: 108  KAAAGWAHCVSVTEAGEVYTWG 129
             + +G  HC++VT++G+VY WG
Sbjct: 3012 CSCSGALHCLAVTDSGQVYAWG 3033



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 3799 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3850

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 3851 ACVTAAGDLYTWG 3863


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3046 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3088

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3089 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3140

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3141 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3200

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3201 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3258

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3259 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3318

Query: 457  HTL 459
            H++
Sbjct: 3319 HSV 3321



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 131/315 (41%), Gaps = 57/315 (18%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4043 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGA 4102

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4103 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4146

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              VA  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4147 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4189

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4190 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4241

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC S +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4242 RQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4299

Query: 393  ESKRAKVVSCGARHS 407
            + K+   V+CG+ H+
Sbjct: 4300 QGKKVNRVACGSAHT 4314



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 36/291 (12%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      P +I
Sbjct: 4028 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR-SPCDRPRVI 4086

Query: 260  PCL------EHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYV 291
              L      + AA G     +   G + +   G+ GR                      V
Sbjct: 4087 ESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRV 4146

Query: 292  KEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
             ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G
Sbjct: 4147 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4206

Query: 350  LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
               +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H   
Sbjct: 4207 SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVC 4264

Query: 410  LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
             +EDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4265 CSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4315



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2997 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3054

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3055 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3104

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3105 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3164

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3165 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3205

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3206 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3259

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3260 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3317

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3318 SHSVAWT 3324



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C   AA    RP+ +  G     +V + 
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----CEALAAL---RPVQLIGGEQTLFAVTAD 4004

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4005 GKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4064

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL   +V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4065 GEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4124

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4125 GHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4182

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4183 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4216



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2938 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2988

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2989 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3028

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3029 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3088

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3089 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3146

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3147 LLGHRVIQVACGSRDAQTLALTDE 3170



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VVKVRCGSQFSVALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPSAL--PGLDTKHIVGIACGPAQS 774



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4206 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4264

Query: 119  VTEAGEVYTWG 129
             +E GEVYTWG
Sbjct: 4265 CSEDGEVYTWG 4275



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPSALPGLD 760



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4053 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4104

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4105 ACVTAAGDLYTWG 4117


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 742 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 800

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 801 VISTF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 840

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 841 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 900

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 901 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 958

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 959 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 991



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------ 264
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  +  L        
Sbjct: 3252 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKV 3311

Query: 265  --AASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 3312 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3371

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 3372 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3431

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3432 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3489

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + ++ Q+
Sbjct: 3490 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3539



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 132/305 (43%), Gaps = 86/305 (28%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3308 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3350

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3351 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3402

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3403 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3462

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3463 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3520

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACG 454
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  HG   + I   ACG
Sbjct: 3521 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV--HGLEGQKITRVACG 3578

Query: 455  WWHTL 459
              H++
Sbjct: 3579 SSHSV 3583



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 134/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4286 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4345

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I   + AA G     +   G + +   G+ GR                      V 
Sbjct: 4346 SLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4405

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4406 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4465

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4466 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4523

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4524 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4573



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4301 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGA 4360

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4361 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4404

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4405 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4447

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4448 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4499

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4500 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4557

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4558 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4592



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 150/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 3259 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGLSSGTVPIPRQVTALSSYVVKK 3310

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H  ++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3311 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3360

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3361 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3420

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3421 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3462

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHGS     +P     L
Sbjct: 3463 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3515

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L+    LE ++  
Sbjct: 3516 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVHG--LEGQKIT 3573

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3574 RVACGSSHSVAWT 3586



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 36/269 (13%)

Query: 202  SPC--LVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            +PC  L TL P   I     GG  TL  ++  G+++  GYG  G+LG     + V TP L
Sbjct: 4236 TPCEALATLRPVQLI-----GGEQTLFAVTADGKLYATGYGAGGRLG-IGGTESVSTPTL 4289

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + +++ +VNS              GG+H   ++  G + ++G    
Sbjct: 4290 LESIQH--------VFIKKVAVNS--------------GGKHCLALSSEGEVYSWGEAED 4327

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+LG    
Sbjct: 4328 GKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 4387

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G S    
Sbjct: 4388 EDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4445

Query: 437  IPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            +P  +  + G     + CG   ++ L ++
Sbjct: 4446 VPMKIDSLTGLGVVKVECGSQFSVALTKS 4474



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 3221 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 3254

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G +   G    G+ G G ++  +  P   ++L    V+++A 
Sbjct: 3255 -VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAV 3313

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3314 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3371

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA LT  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3372 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3431

Query: 466  Q 466
            +
Sbjct: 3432 E 3432



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203  PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
            P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 855  PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 913

Query: 261  CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
             L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 914  KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 949

Query: 321  CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
             GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 950  LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 1009

Query: 381  ENVPKLLETPILESKRAKVVSCGARHS 407
            +  P  L  P L++K    ++CG   S
Sbjct: 1010 KPEPTAL--PGLDTKHIVGIACGPAQS 1034



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 919 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 977

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 978 GSTHCLALTEDSEVHSWG 995



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4464 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4522

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4523 CTEDGEVYTWG 4533



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 4214 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4273

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      +   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 4274 GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 4333

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    ++A G  H+
Sbjct: 4334 NRSPCDRPRVIESLRGIEVADVAAGGAHS 4362



 Score = 42.4 bits (98), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22   VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
            VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 777  VYSWGCGDGGRLGHGDTVPLEEP---KVISTFSGKQAGKHVVHIACGSTYSAAITAEGEL 833

Query: 73   ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
             TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 834  YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 884

Query: 123  GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
            G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 885  GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 934

Query: 178  KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
            K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 935  KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 994

Query: 237  GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
            G   + Q     R+   P P  +P L+
Sbjct: 995  GSNDQCQHFDTLRVTK-PEPTALPGLD 1020


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 122/249 (48%), Gaps = 30/249 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L LS  G V+ WG G +G+LG G+R+                   DR
Sbjct: 3871 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY-----------------DR 3913

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+ +         G   V +IACGG HSA +T AG L T+G G YG+ GHG + DQL 
Sbjct: 3914 PKLIEE-------LLGTEIV-DIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT 3965

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L D +V  +A  +G   T+C++ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 3966 PKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIES 4025

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIHGFLP 448
              L       V CG++ S  LT  G + +WG   Y +LG G D   R    +  + G   
Sbjct: 4026 --LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4083

Query: 449  RNIACGWWH 457
             +IA G  H
Sbjct: 4084 ISIATGSLH 4092



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 134/310 (43%), Gaps = 82/310 (26%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V +GG+H L L+  G+V+ WG G +G+LG G+ I +                 D+
Sbjct: 2877 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISL-----------------DK 2919

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       S K+ R  +++IACG  HSA +T +G L T+G G YG+ GHG T  Q +
Sbjct: 2920 PRLIE------SLKSKR--IRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSK 2971

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGT-------------- 375
            P    SL+  +V QIA G     T+ ++ +G VY +G   FG+LG               
Sbjct: 2972 PKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDR 3031

Query: 376  --------------------------------------GVDQAENVPKLLETPILESKRA 397
                                                  G D     P L+E   L  K+ 
Sbjct: 3032 LNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG--LRGKKI 3089

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +I    PSLV  +       ++CG  
Sbjct: 3090 IHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSS 3149

Query: 457  HTLLLAETTQ 466
            H++    T Q
Sbjct: 3150 HSIAWVLTDQ 3159



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 28/259 (10%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   +A G +   ++S  G+++  G G  G+LGLG     V  P  IP L         
Sbjct: 2823 LKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDD-SNVCEPKPIPFLSQ------- 2874

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
              ++++ +V+S              GG+H+  +T  G + ++G G  G+ GHG++    +
Sbjct: 2875 -YVIKKVAVHS--------------GGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDK 2919

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P    SL   ++  IA G  H+  I+  G +Y +G  ++G+LG G    ++ PKL+++  
Sbjct: 2920 PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQS-- 2977

Query: 392  LESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
            L  +R   ++CG+R   +  LT DG V SWG   +G+LG G S     P L+  ++G   
Sbjct: 2978 LVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV 3037

Query: 449  RNIACGWWHTLLLAETTQI 467
              I CG   +L L +  ++
Sbjct: 3038 VQIECGAQFSLALTKYGEV 3056



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 173/416 (41%), Gaps = 66/416 (15%)

Query: 18   KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
            + + VY+WG         L G S  K P+ S + ++L      K V   GG       S+
Sbjct: 2788 QHSAVYVWGLNDKDQLGGLKG-SKIKLPVYSEVLSKL------KPVHIAGGSKTLFVVSQ 2840

Query: 69   SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
             GKL   G   + G+  L    +   P+P P  ++  + K A  +G  H +++T+ G+V+
Sbjct: 2841 EGKLYACGEGTN-GRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVF 2899

Query: 127  TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
            +WG  E           G   S   D      +L +++       +G        TSS  
Sbjct: 2900 SWGEGE-------DGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAI---TSSGE 2949

Query: 187  E------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGY 238
                   E      GD      P LV    G ++ ++A G R   T+ L+  G V+ WG 
Sbjct: 2950 LYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGD 3009

Query: 239  GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
            G  G+LG G                  + G   PLL+ +  +N  G      V +I CG 
Sbjct: 3010 GDFGKLGRG-----------------GSDGCYTPLLIDR--LNGLG------VVQIECGA 3044

Query: 299  RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            + S  +T  G + T+G G Y + GHG+ +   +P+    L   ++  +A G  H + ++ 
Sbjct: 3045 QFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 3104

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA--VLTE 412
             G+VY +G N  GQ G G       P L+    L+  R   VSCG+ HS   VLT+
Sbjct: 3105 IGQVYAWGDNDHGQQGNGTTIVNKKPSLVHE--LDDARVNRVSCGSSHSIAWVLTD 3158



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 117/250 (46%), Gaps = 38/250 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            IT +A G  ++  LS  G+++ WG G  G+LG G+  K V    +IP L  A +G    
Sbjct: 555 NITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDV----MIPTLVTALNGH--- 607

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGG---RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                             V  +ACGG     +  VT +G + ++G G +G+ G G  +  
Sbjct: 608 -----------------MVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGS 650

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
             P     L+DI V ++  G   +  ++  G VY +G  +  +LG G +     PK+++ 
Sbjct: 651 KTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIID- 709

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL--GLGDSIDRNIPSLVPIHGFL 447
            IL++K+ K +  G  H   LTED  V  WG N +GQ+   LG  +    P+L P   F 
Sbjct: 710 -ILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQIDPALGTIVPE--PTLCPT--FS 764

Query: 448 PRNI---ACG 454
            +N+   ACG
Sbjct: 765 GKNVIGLACG 774



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 30/223 (13%)

Query: 220  GGRHTLI-LSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
            GG  TL  ++  G+V+  GYG  G+LG+G +   MVPT  L+  ++H        + V++
Sbjct: 3824 GGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPT--LLESIQH--------VFVKK 3873

Query: 278  GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
             +VNS              GG+H   ++  G + ++G G  G+ GHG+     RP     
Sbjct: 3874 VAVNS--------------GGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEE 3919

Query: 338  LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
            L+  ++  IA G  H+  I+  G +Y +G  ++G+LG G  + +  PKL+E   L+  + 
Sbjct: 3920 LLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEA--LQDYKV 3977

Query: 398  KVVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
              V+CG+  +  L  T+D  V SWG   YG+LG G S    IP
Sbjct: 3978 IDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIP 4020



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 29/215 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L+P L+      K+  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 3958 GDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG----- 4012

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G   P+ +          AG   +K + CG + S  +T +GA+ T
Sbjct: 4013 ------------GSDGCKIPMKIE-------SLAGLGVIK-VECGSQFSVALTRSGAIYT 4052

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHG+ +   RP   ++L   ++  IA G  H V  + +G V+ +G N  GQ
Sbjct: 4053 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4112

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            LG G   A   P+L+    L+ K+   V+CG+ H+
Sbjct: 4113 LGDGTTSALQRPRLVHA--LQGKKITRVACGSAHT 4145



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 34/257 (13%)

Query: 214 ITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           IT +A+   G H L L+    V+ WG G  G+LG G+ +     P LI  L         
Sbjct: 502 ITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGN-MTWYDEPKLIEALVEKN----- 555

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQL 330
                              +  IACG  +SA ++  G L T+G G YG+ GHG+++ D +
Sbjct: 556 -------------------ITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVM 596

Query: 331 RPSYASSLMDIQVEQIAAG---LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
            P+  ++L    V  +A G      T+C++  G V+ +G    G+LG G       PK++
Sbjct: 597 IPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIV 656

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
           +  +L+   AKV  CG + SA LT  G+V +WG  +  +LG G+      P ++ I    
Sbjct: 657 DK-LLDINVAKVY-CGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTK 714

Query: 448 P-RNIACGWWHTLLLAE 463
             +++  G  H L L E
Sbjct: 715 KIKDLYIGHLHVLALTE 731



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P Y+  L  ++   IA G      +S EG++Y  G    G+LG G D     PK +  P 
Sbjct: 2814 PVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPI--PF 2871

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT+DG+V SWG  + G+LG G+SI  + P L+  +     
Sbjct: 2872 LSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRI 2931

Query: 449  RNIACGWWHT 458
            R+IACG  H+
Sbjct: 2932 RDIACGSGHS 2941



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 1/153 (0%)

Query: 307  AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            +GA+  +G    GQ G         P    SL  ++  Q+  G      ++ +G+VY  G
Sbjct: 3783 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 3842

Query: 367  GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
                G+LG G   +  VP LLE+      +   V+ G +H   L+ +G V SWG    G+
Sbjct: 3843 YGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 3902

Query: 427  LGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            LG G+ +  + P L+  + G    +IACG  H+
Sbjct: 3903 LGHGNRLSYDRPKLIEELLGTEIVDIACGGHHS 3935



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 45/166 (27%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF-------------------------- 365
           P Y  ++ ++ ++Q+       + +SV G VY+                           
Sbjct: 452 PVYYDTISELGIKQLCCTERAVIILSVNGNVYMMYYGSETQRVYGFSEKPITMIASHSDG 511

Query: 366 ---------------GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
                          G  + G+LG G     + PKL+E   L  K    ++CG+ +SA L
Sbjct: 512 THYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEA--LVEKNITFIACGSTYSAAL 569

Query: 411 TEDGQVLSWGWNKYGQLGLGDS-IDRNIPSLV-PIHGFLPRNIACG 454
           + +G++ +WG   YG+LG G+S  D  IP+LV  ++G +   +ACG
Sbjct: 570 SSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACG 615



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A + SG + TWG  D     + T   H   P          ++  A G  HCV+
Sbjct: 4037 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4095

Query: 119  VTEAGEVYTWG 129
             T+ GEV+TWG
Sbjct: 4096 CTDKGEVFTWG 4106



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 77/218 (35%), Gaps = 70/218 (32%)

Query: 56   CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
            CG G    L  ++   + +WG  D     Y   G+ G      P+  E+     V+K   
Sbjct: 3982 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4036

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G    V++T +G +YTWG                 G + +   G                
Sbjct: 4037 GSQFSVALTRSGAIYTWG----------------KGDYHRLGHG---------------- 4064

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
              + V + RK ++ +                        G KI  +A G  H +  +D G
Sbjct: 4065 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACTDKG 4100

Query: 232  QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
            +V+ WG   EGQLG G+    +  P L+    HA  GK
Sbjct: 4101 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4133


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3142

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3203 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3260

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 457  HTL 459
            H++
Sbjct: 3321 HSV 3323



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 131/315 (41%), Gaps = 57/315 (18%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGA 4104

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4105 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4148

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              VA  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4149 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4191

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4192 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4243

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC S +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4244 RQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4301

Query: 393  ESKRAKVVSCGARHS 407
            + K+   V+CG+ H+
Sbjct: 4302 QGKKVNRVACGSAHT 4316



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 36/291 (12%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      P +I
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR-SPCDRPRVI 4088

Query: 260  PCL------EHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYV 291
              L      + AA G     +   G + +   G+ GR                      V
Sbjct: 4089 ESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRV 4148

Query: 292  KEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
             ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G
Sbjct: 4149 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4208

Query: 350  LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
               +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H   
Sbjct: 4209 SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVC 4266

Query: 410  LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
             +EDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4267 CSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3056

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3057 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3106

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3207

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3208 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3261

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3262 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3319

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3320 SHSVAWT 3326



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C   AA    RP+ +  G     +V + 
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----CEALAAL---RPVQLIGGEQTLFAVTAD 4006

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4007 GKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4066

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL   +V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4067 GEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4127 GHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4218



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2940 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2990

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2991 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3030

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3031 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3090

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3091 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDE 3172



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 130/328 (39%), Gaps = 73/328 (22%)

Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           ++VK AA     H +++   GEVY+WG              G  G       G    +P 
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536

Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
           E+    +  S K+AG+ VV      T SA   +E               + +S DE    
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594

Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI
Sbjct: 595 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             L+                           V ++ CG + S  +T  G + ++G G   
Sbjct: 653 EKLQDLD------------------------VVKVRCGSQFSVALTKDGQVYSWGKGDNQ 688

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +  
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRV 748

Query: 380 AENVPKLLETPILESKRAKVVSCGARHS 407
            +  P  L  P L++K    ++CG   S
Sbjct: 749 TKPEPSAL--PGLDTKHIVGIACGPAQS 774



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 119  VTEAGEVYTWG 129
             +E GEVYTWG
Sbjct: 4267 CSEDGEVYTWG 4277



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPSALPGLD 760



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4055 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4106

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4107 ACVTAAGDLYTWG 4119


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
           mulatta]
          Length = 4840

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3141

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3202 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3259

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 457  HTL 459
            H++
Sbjct: 3320 HSV 3322



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4058 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4117

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4118 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4177

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4178 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4237

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4238 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4295

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4296 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4345



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4073 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4132

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4133 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4176

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4177 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4219

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4220 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4271

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4272 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4329

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4330 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4364



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3260

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3261 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3318

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3319 SHSVAWT 3325



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4034

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4035 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4094

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4095 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4154

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4155 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4212

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4213 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4246



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2939 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2989

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2990 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3029

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3030 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3089

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3090 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDE 3171



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4236 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4294

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4295 CTEDGEVYTWG 4305



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4083 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4134

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4135 ACVTAAGDLYTWG 4147


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
           [Equus caballus]
          Length = 4840

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----- 265
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  +  L        
Sbjct: 2995 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKV 3054

Query: 266  ---ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 3055 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 3115 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3175 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3232

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + +  Q+
Sbjct: 3233 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQV 3282



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3051 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3093

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3094 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3145

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3205

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3206 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3263

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3264 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3323

Query: 457  HTL 459
            H++
Sbjct: 3324 HSV 3326



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 136/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4033 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4092

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4093 SLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4152

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4153 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4212

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4213 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4270

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LVP + G     +ACG  HTL
Sbjct: 4271 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAHTL 4320



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 144/351 (41%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4048 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGA 4107

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4108 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4151

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              VA  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4152 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4194

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4195 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4246

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+  P L
Sbjct: 4247 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV--PAL 4304

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4305 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPTQVPM 4339



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 151/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQVTALSSYVVKK 3053

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H  ++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3054 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3205

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHGS     +P     L
Sbjct: 3206 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3258

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3259 RGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3316

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3317 RVACGSSHSVAWT 3329



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4009

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4010 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4069

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I++  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4070 GEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4129

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4130 GHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4187

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4188 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4221



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 5/151 (3%)

Query: 321  CGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            C  G    Q++ PS++ +L  + V Q+A G      ++VEG+VY  G    G+LG G+  
Sbjct: 2975 CCDGVGLSQIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISS 3034

Query: 380  AENVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
               VP   +   L S   K V+   G RH+  LT DG+V SWG    G+LG    ++ + 
Sbjct: 3035 G-TVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3093

Query: 438  PSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            P L+  +     R+IACG  H+  L  + ++
Sbjct: 3094 PRLIEALKTKRIRDIACGSSHSAALTSSGEL 3124



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPSAL--PGLDTKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4211 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4269

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4270 CTEDGEVYTWG 4280



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAVPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPSALPGLD 760



 Score = 38.5 bits (88), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     +V  AAG AH 
Sbjct: 4058 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHS 4109

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4110 ACVTAAGDLYTWG 4122


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 118/248 (47%), Gaps = 28/248 (11%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            I  V+ G  HTL L+D GQV+ WG   +GQLGL    + +  P  I  L          
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQ------ 138

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLR 331
                             + ++ACG  HS  ++ A  +  +G   YGQ G G     Q  
Sbjct: 139 ------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P    SL+ I   Q+AAG  H+  +++ G ++ +G N+FGQLG   +    VP LL++  
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS-- 238

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFLPRN 450
           L S++   + CG  H+A LT++G V ++G   YGQLG    S + N   +  + G +   
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298

Query: 451 IACGWWHT 458
           +ACG  HT
Sbjct: 299 VACGRQHT 306



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 128/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G + ++G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYSWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFANKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY+WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E          E +   R   S  +                        
Sbjct: 111 DSDGQLGLLGSE----------EYIRVPRNIKSLSD------------------------ 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       V+CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +    + +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV SWG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3042 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3084

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3085 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3136

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3137 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3196

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3197 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3254

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3255 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3314

Query: 457  HTL 459
            H++
Sbjct: 3315 HSV 3317



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4022 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4081

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4082 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4141

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4142 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4201

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4202 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4259

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4260 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4309



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4037 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4096

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4097 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4140

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4141 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4183

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4184 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4235

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4236 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4293

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4294 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4328



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2993 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3050

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3051 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3100

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3101 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3160

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3161 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3201

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3202 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3255

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3256 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3313

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3314 SHSVAWT 3320



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 3998

Query: 284  GK----------------------------AGRSYVKEIAC--GGRHSAVVTDAGALLTF 313
            GK                                ++K++A   GG+H   ++  G + ++
Sbjct: 3999 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4058

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4059 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4118

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4119 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4176

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4177 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4210



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2934 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2984

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2985 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3024

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3025 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3084

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3085 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3142

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3143 LLGHRVIQVACGSRDAQTLALTDE 3166



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4200 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4258

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4259 CTEDGEVYTWG 4269



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4047 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4098

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4099 ACVTAAGDLYTWG 4111


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 181/414 (43%), Gaps = 70/414 (16%)

Query: 72  LITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           ++TWGS+ +    + T G+     TPE  P      +   + G  +  ++TE G+VY WG
Sbjct: 590 IMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWG 649

Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK----RRKTSSA 185
                         GS  +    + G  S    +Q  P+   +  EVV        +++ 
Sbjct: 650 R-------------GSVKNPPLSTLGNGSL--EDQLLPTKVESLSEVVLVSIGYYHSAAL 694

Query: 186 REESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
           +   E              GD      P +V       +T+V  G +HT+ L+  G+V+ 
Sbjct: 695 KSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFT 754

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG    GQLGLG   K   TP L+  LE                        +  + +IA
Sbjct: 755 WGTSEYGQLGLGDTQKNC-TPMLVTSLE------------------------KYNIIQIA 789

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CG  H AV+T+A  +L FG G       GS N    P    +L  + +E+++ G + T  
Sbjct: 790 CGSTHCAVLTNAREVLVFGNG----AAMGSANIISVPMMVPALKHLNIERLSCGHYSTAA 845

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++  G VY +G  Q  +LG G +Q+E  PKL++   L S+  + +SCG RH A LT+ G+
Sbjct: 846 LTECGDVYTWGSGQ--ELGHGTNQSELHPKLVDG--LRSQSIRQISCGGRHMAFLTDSGK 901

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAETTQ 466
           + + G + +GQLG     D+N P    I   L     +++CG  H   L +TT+
Sbjct: 902 IYTCGKDPFGQLGHAQG-DQNKPK--KIDSLLKTTFISVSCGENHNASLFDTTR 952



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 155/384 (40%), Gaps = 67/384 (17%)

Query: 43  PARLCGGDSWKDVCGGGCG--FALATSESGKLITWG--SADDEGQSYLTSGKHGETPEPF 98
           P RL   +   ++C   CG  ++ A +E+G +  WG  S  +   S L +G   +   P 
Sbjct: 615 PERLPNFN-IPEICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPT 673

Query: 99  PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
            + + + VV  + G+ H  ++   GE+ TWG   C          G  G         Q+
Sbjct: 674 KVESLSEVVLVSIGYYHSAALKSNGELLTWG---C----------GEDGQLGHGDVLNQT 720

Query: 159 ALPTEQAPPS----DKRAGEE----VVKRRKTSS-AREESENPASGDEFFTLSPCLVTLN 209
                Q   S      + GE+    + K  K  +    E      GD     +P LVT  
Sbjct: 721 IPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSL 780

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
               I ++A G  H  +L++  +V  +G G      +GS   ++  P ++P L+H     
Sbjct: 781 EKYNIIQIACGSTHCAVLTNAREVLVFGNGA----AMGS-ANIISVPMMVPALKHLN--- 832

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                                ++ ++CG   +A +T+ G + T  WG   + GHG+   +
Sbjct: 833 ---------------------IERLSCGHYSTAALTECGDVYT--WGSGQELGHGTNQSE 869

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG---VDQAENVPKL 386
           L P     L    + QI+ G  H   ++  G++Y  G + FGQLG      ++ + +  L
Sbjct: 870 LHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQGDQNKPKKIDSL 929

Query: 387 LETPILESKRAKVVSCGARHSAVL 410
           L+T  +       VSCG  H+A L
Sbjct: 930 LKTTFIS------VSCGENHNASL 947



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 141/359 (39%), Gaps = 66/359 (18%)

Query: 22  VYMWGYLPGTSPEKSPILSPI----------PARLCGGDSWKDVCGGGCGF--ALATSES 69
           VYMWG        K+P LS +          P ++   +S  +V     G+  + A   +
Sbjct: 645 VYMWG----RGSVKNPPLSTLGNGSLEDQLLPTKV---ESLSEVVLVSIGYYHSAALKSN 697

Query: 70  GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           G+L+TWG  +D GQ       +   P+     T   V +   G  H + +T+ G+V+TWG
Sbjct: 698 GELLTWGCGED-GQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWG 756

Query: 130 WRECVPSAKVTRDFGS--AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
                     T ++G    G  QK+ T     L T     +  +           ++ARE
Sbjct: 757 ----------TSEYGQLGLGDTQKNCT---PMLVTSLEKYNIIQIACGSTHCAVLTNARE 803

Query: 188 E---SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
                   A G       P +V     + I +++ G   T  L++ G V+ WG G E  L
Sbjct: 804 VLVFGNGAAMGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQE--L 861

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G G+    +  P L+  L   +                        +++I+CGGRH A +
Sbjct: 862 GHGTNQSEL-HPKLVDGLRSQS------------------------IRQISCGGRHMAFL 896

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           TD+G + T G   +GQ GH    DQ +P    SL+      ++ G  H   +    R +
Sbjct: 897 TDSGKIYTCGKDPFGQLGHAQ-GDQNKPKKIDSLLKTTFISVSCGENHNASLFDTTRSF 954


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
           carolinensis]
          Length = 4839

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 131/272 (48%), Gaps = 28/272 (10%)

Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P +
Sbjct: 483 LGPQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL-EEPKM 541

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I  L                    SGK    +V  IACG  +SA +T  G L T+G G Y
Sbjct: 542 ISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G+ GHGS+ DQ  P   + L  ++V  ++  +G   T+ ++  G+V+ +G   +G+LG G
Sbjct: 582 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  PKL+E   L+      VSCG++ S  LT+DGQV SWG     +LG G      
Sbjct: 642 GSDGCKTPKLIEK--LQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 437 IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P L+  + G    ++  G  H L L E +++
Sbjct: 700 YPKLLEGLQGEKVIDVVAGSTHCLALTEDSEV 731



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 134/290 (46%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----- 265
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L +      
Sbjct: 2995 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKV 3054

Query: 266  ---ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 3055 AVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L ++G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 3115 SAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3175 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3232

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + +T Q+
Sbjct: 3233 WGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQV 3282



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 133/306 (43%), Gaps = 82/306 (26%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH + L+  G+V+ WG G +G+LG  SR+                  
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3091

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L ++G G YG+ GHG    
Sbjct: 3092 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT 3142

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--- 383
            QL+P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+   
Sbjct: 3143 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3202

Query: 384  -------------------------------------------------PKLLETPILES 394
                                                             P+++E   L  
Sbjct: 3203 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG--LRG 3260

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
            K+   V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +AC
Sbjct: 3261 KKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 454  GWWHTL 459
            G  H++
Sbjct: 3321 GSSHSV 3326



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 141/349 (40%), Gaps = 69/349 (19%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGA 4106

Query: 157  QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             SA  T         A  ++    K    R        GD    L P LV    G ++  
Sbjct: 4107 HSACIT---------AAGDLYTWGKGRYGRL-----GHGDSEDQLKPKLVEALQGYRVID 4152

Query: 217  VA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
            +A  +G   TL L+D   VW WG G  G+LG G                  + G   P+ 
Sbjct: 4153 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVPM- 4194

Query: 275  VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
                 ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP  
Sbjct: 4195 ----KIDSLTGVG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4247

Query: 335  ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
               L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L+ 
Sbjct: 4248 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--LQG 4305

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4306 KKINRVACGSAHT---------LAWSTSKPANAG-------KLPTQVPM 4338



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 118/247 (47%), Gaps = 49/247 (19%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4008

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4068

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  IAAG  H+ CI+  G +Y +G  ++G+L
Sbjct: 4069 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRL 4128

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G G  + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4129 GHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 432  SIDRNIP 438
            S    +P
Sbjct: 4187 SDGCKVP 4193



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 151/370 (40%), Gaps = 63/370 (17%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGLSSGTVPIPRQITALSNYVVKK 3053

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H +++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3054 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3205

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHG+     +P     L
Sbjct: 3206 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL 3258

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3259 RGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3316

Query: 399  VVSCGARHSA 408
             V+CG+ HS 
Sbjct: 3317 RVACGSSHSV 3326



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2997

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G +   G    G+ G G ++  +  P   ++L +  V+++A 
Sbjct: 2998 -VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAV 3056

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3114

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA +T  G++ SWG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3115 SAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174

Query: 466  Q 466
            +
Sbjct: 3175 E 3175



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LVT   G+K+  V+  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           + +++CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------IVKVSCGSQFSVALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  + AG  H + ++ +  VY +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDTLRIT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L+SK    ++CG   S
Sbjct: 750 KPDPTAL--PGLDSKHIVGIACGPAQS 774



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4269 CTEDGEVYTWG 4279



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 3960 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      +   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 4079

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    +IA G  H+
Sbjct: 4080 NRSPCDRPRVIESLRGIEVVDIAAGGAHS 4108



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 42  IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
           IP  + G    K +   CG G    LA +E+G++ +WG  D     Y   G+ G    +T
Sbjct: 594 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648

Query: 95  PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           P+      +  +VK + G    V++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWG 683



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 4046 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 4097

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   +T AG++YTWG
Sbjct: 4098 VVDIAAGGAHSACITAAGDLYTWG 4121


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
           [Pan paniscus]
          Length = 4839

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 427 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 485

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 486 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 525

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 526 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 585

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 586 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 643

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 644 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 676



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3052 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3094

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3095 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3146

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3147 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3206

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3207 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3264

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3265 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3324

Query: 457  HTL 459
            H++
Sbjct: 3325 HSV 3327



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4091

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4092 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4151

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4211

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4269

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4270 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4319



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4106

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4107 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4150

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4151 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4193

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4194 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4245

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4246 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4303

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4304 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4338



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 3003 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3060

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3061 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3110

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3111 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3170

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3171 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3211

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3212 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3265

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3266 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3323

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3324 SHSVAWT 3330



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4008

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4068

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4069 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4128

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4129 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4220



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2944 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2994

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2995 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3034

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3035 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3094

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3095 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3152

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3153 LLGHRVIQVACGSRDAQTLALTDE 3176



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 130/328 (39%), Gaps = 73/328 (22%)

Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           ++VK AA     H +++   GEVY+WG              G  G       G    +P 
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 481

Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
           E+    +  S K+AG+ VV      T SA   +E               + +S DE    
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 539

Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI
Sbjct: 540 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 597

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             L+                           V ++ CG + S  +T  G + ++G G   
Sbjct: 598 EKLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQ 633

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +  
Sbjct: 634 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRV 693

Query: 380 AENVPKLLETPILESKRAKVVSCGARHS 407
            +  P  L  P L++K    ++CG   S
Sbjct: 694 TKPEPAAL--PGLDTKHIVGIACGPAQS 719



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4269 CTEDGEVYTWG 4279



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 604 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 662

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 663 GSTHCLALTEDSEVHSWG 680



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 462 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 518

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 519 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 569

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 570 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 619

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 620 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 679

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 680 GSNDQCQHFDTLRVTK-PEPAALPGLD 705



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4057 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4108

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4109 ACVTAAGDLYTWG 4121


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 128/259 (49%), Gaps = 30/259 (11%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+     P LI  L+        
Sbjct: 85  VKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMN-CDKPRLIEALK-------- 135

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                              +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 136 ----------------TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 179

Query: 332 PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+P+ +E 
Sbjct: 180 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 239

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
             L  +    + CGA+ S  LT+ G V +WG   Y +LG G  +    P +V  + G   
Sbjct: 240 --LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 297

Query: 449 RNIACGWWHTLLLAETTQI 467
            ++A G  H L + ++ Q+
Sbjct: 298 VHVAVGALHCLAVTDSGQV 316



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 119/295 (40%), Gaps = 47/295 (15%)

Query: 92  GETPEPFPLPTEAS-VVKAAA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
           G  P P  +   +S VVK  A   G  H  ++T  G+V+ WG            D G  G
Sbjct: 69  GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWG----------EGDDGKLG 118

Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR------EESENPASGDEFFTL 201
            F + +  K   +   +       A         TSS         E      GD    L
Sbjct: 119 HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 178

Query: 202 SPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            P +V +  G ++ +VA G R   TL L+D G V+ WG G  G+LG G            
Sbjct: 179 KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------------ 226

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
                 + G + P  + +  +N  G      V +I CG + S  +T +G + T+G G Y 
Sbjct: 227 -----GSEGCNIPQNIER--LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYF 273

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           + GHGS     +P     L   ++  +A G  H + ++  G+VY +G N  GQ G
Sbjct: 274 RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 328



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 4/139 (2%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           PS++ +L  + V Q+A G      ++VEG+VY  G    G+LG G+     VP   +   
Sbjct: 21  PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITA 79

Query: 392 LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
           L S   K V+   G RH+  LT DG+V  WG    G+LG    ++ + P L+  +     
Sbjct: 80  LSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKTKRI 139

Query: 449 RNIACGWWHTLLLAETTQI 467
           R+IACG  H+  L  + ++
Sbjct: 140 RDIACGSSHSAALTSSGEL 158


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3141

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3202 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3259

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 457  HTL 459
            H++
Sbjct: 3320 HSV 3322



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4264

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4189 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4240

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4298

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4299 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4333



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3260

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3261 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3318

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3319 SHSVAWT 3325



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4003

Query: 284  GK----------------------------AGRSYVKEIAC--GGRHSAVVTDAGALLTF 313
            GK                                ++K++A   GG+H   ++  G + ++
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4124 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2939 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2989

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2990 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3029

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3030 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3089

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3090 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDE 3171



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Ailuropoda melanoleuca]
          Length = 4837

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3142

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3203 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3260

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 457  HTL 459
            H++
Sbjct: 3321 HSV 3323



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4089

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4090 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4209

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4210 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4267

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4268 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4104

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4105 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4148

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              VA  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4149 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4191

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4192 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4243

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4244 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4301

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4302 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4336



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3056

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3057 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3106

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3207

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3208 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3261

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3262 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3319

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3320 SHSVAWT 3326



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 131/269 (48%), Gaps = 36/269 (13%)

Query: 202  SPC--LVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            +PC  L TL P   I     GG  TL  ++  G+++  GYG  G+LG     + V TP L
Sbjct: 3980 TPCEALATLRPVQLI-----GGEQTLFAVTADGKLYATGYGAGGRLG-IGGTESVSTPTL 4033

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + +++ +VNS              GG+H   ++  G + ++G    
Sbjct: 4034 LESIQH--------VFIKKVAVNS--------------GGKHCLALSSEGEVYSWGEAED 4071

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+LG    
Sbjct: 4072 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 4131

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + +  PKL+E   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G S    
Sbjct: 4132 EDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4189

Query: 437  IPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            +P  +  + G     + CG   ++ L ++
Sbjct: 4190 VPMKIDSLTGLGVVKVECGSQFSVALTKS 4218



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2940 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2990

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2991 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3030

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3031 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3090

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3091 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDE 3172



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPAAL--PGLDTKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4267 CTEDGEVYTWG 4277



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPAALPGLD 760



 Score = 42.4 bits (98), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 3958 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      +   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 4077

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    ++A G  H+
Sbjct: 4078 NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4055 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4107 ACVTAAGDLYTWG 4119


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
           catus]
          Length = 4837

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3142

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3203 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3260

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 457  HTL 459
            H++
Sbjct: 3321 HSV 3323



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4089

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                     +V 
Sbjct: 4090 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVV 4149

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4209

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4210 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4267

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4268 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 142/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4104

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G  +
Sbjct: 4105 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHHV 4148

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              VA  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4149 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4191

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4192 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4243

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4244 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4301

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4302 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4336



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3056

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3057 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3106

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3207

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3208 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3261

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3262 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3319

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3320 SHSVAWT 3326



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4006

Query: 284  GK----------------------------AGRSYVKEIAC--GGRHSAVVTDAGALLTF 313
            GK                                ++K++A   GG+H   ++  G + ++
Sbjct: 4007 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4066

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4067 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+      V+CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4127 GHSDSEDQLKPKLVEA--LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4218



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2940 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2990

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2991 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3030

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3031 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3090

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3091 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDE 3172



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPAAL--PGLDTKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4267 CTEDGEVYTWG 4277



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPVLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPAALPGLD 760



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4055 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4107 ACVTAAGDLYTWG 4119


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 459 TLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 517

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 518 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 557

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 558 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 617

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 618 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 675

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 676 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 708



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3025 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3067

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3068 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3119

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3120 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3179

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3180 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3237

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3238 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3297

Query: 457  HTL 459
            H++
Sbjct: 3298 HSV 3300



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4007 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4066

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4067 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4126

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4127 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4186

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4187 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4244

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4245 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4294



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4022 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4081

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4082 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4125

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              VA  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4126 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4168

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4169 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4220

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4221 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4278

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4279 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4313



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2976 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3033

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3034 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3083

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3084 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3143

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3144 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3184

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3185 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3238

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3239 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3296

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3297 SHSVAWT 3303



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 131/269 (48%), Gaps = 36/269 (13%)

Query: 202  SPC--LVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            +PC  L TL P   I     GG  TL  ++  G+++  GYG  G+LG     + V TP L
Sbjct: 3957 TPCEALATLRPVQLI-----GGEQTLFAVTADGKLYATGYGAGGRLG-IGGTESVSTPTL 4010

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + +++ +VNS              GG+H   ++  G + ++G    
Sbjct: 4011 LESIQH--------VFIKKVAVNS--------------GGKHCLALSSEGEVYSWGEAED 4048

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+LG    
Sbjct: 4049 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 4108

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + +  PKL+E   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G S    
Sbjct: 4109 EDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4166

Query: 437  IPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            +P  +  + G     + CG   ++ L ++
Sbjct: 4167 VPMKIDSLTGLGVVKVECGSQFSVALTKS 4195



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2917 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2967

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2968 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3007

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3008 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3067

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3068 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3125

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3126 LLGHRVIQVACGSRDAQTLALTDE 3149



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 572 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 630

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 631 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 666

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 667 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 726

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 727 KPEPAAL--PGLDTKHIVGIACGPAQS 751



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 636 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 694

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 695 GSTHCLALTEDSEVHSWG 712



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4185 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4243

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4244 CTEDGEVYTWG 4254



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 494 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 550

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 551 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 601

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 602 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 651

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 652 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 711

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 712 GSNDQCQHFDTLRVTK-PEPAALPGLD 737



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 3935 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3994

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      +   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 3995 GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 4054

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    ++A G  H+
Sbjct: 4055 NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4083



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4032 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4083

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4084 ACVTAAGDLYTWG 4096


>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 129/282 (45%), Gaps = 45/282 (15%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
           D+ +T  P  V+  P  KI  +AAG  H+  ++  G+++ WG    GQLGLG +    V 
Sbjct: 103 DKNYTTEPLEVSALP-KKIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVS 161

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P  + CL   +                        +K +A G  HS   TD G  L++G
Sbjct: 162 VPSKVECLNGIS------------------------IKMVALGSEHSVAATDQGEALSWG 197

Query: 315 WGLYGQCGHGS---------TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
            G  G+ GHG          T+ + RP     L  I+V+ +AAGL H+ CI   G V++F
Sbjct: 198 AGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIF 257

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G     + G    +    P +    I E   +K V+CG  H+ V++  G++ +WG N+ G
Sbjct: 258 GERAMDKFGFREAKNATAPSM----ISELPYSKQVACGGYHTCVISSSGELFTWGSNENG 313

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPRN----IACGWWHTLLLAE 463
            LG+G     + P    I G   +N    ++CGW HT  ++E
Sbjct: 314 CLGMGFMETIHFPE--RIEGPFSKNPVSQVSCGWKHTAAISE 353



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 188/440 (42%), Gaps = 70/440 (15%)

Query: 59  GCGFA--LATSESGKLIT--WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
           G GF   L++SE  K     WG+ D  G+  L S +    P         S+V  A G A
Sbjct: 18  GLGFCRRLSSSEPRKRFAALWGNGDF-GRLGLGSLESQWRPAVCSAFDHHSLVAIACGGA 76

Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGK---QSALPTE------- 163
           H + +TE+G VY  G            DFG  G S  K+ T +    SALP +       
Sbjct: 77  HTLFLTESGCVYAAG----------LNDFGQLGVSVDKNYTTEPLEVSALPKKIIHIAAG 126

Query: 164 QAPPSDKRAGEEVVKRRKTSSAR----EESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
               +   A  E+    K S+ +    +++ N  S        P  V    G+ I  VA 
Sbjct: 127 YYHSAAITADGELYMWGKNSNGQLGLGKKAANAVS-------VPSKVECLNGISIKMVAL 179

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G  H++  +D G+   WG GG G+LG G    ++             S + RP L+R   
Sbjct: 180 GSEHSVAATDQGEALSWGAGGSGRLGHGHESSLLGF--------FRTSSEYRPRLIR--- 228

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                +     VK +A G  HSA + + G++  FG     + G     +   PS  S L 
Sbjct: 229 -----RLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGFREAKNATAPSMISELP 283

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
               +Q+A G +HT  IS  G ++ +G N+ G LG G  +  + P+ +E P  ++  ++ 
Sbjct: 284 --YSKQVACGGYHTCVISSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQ- 340

Query: 400 VSCGARHSAVLTEDGQVLSWGW------------NKYGQLGLGDSIDRNIPSLVPI-HGF 446
           VSCG +H+A ++E G V +WGW            +  GQLG G  +D   P +V      
Sbjct: 341 VSCGWKHTAAISE-GNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESV 399

Query: 447 LPRNIACGWWHTLLLAETTQ 466
               ++CG+ HT  + E  +
Sbjct: 400 RALQVSCGFNHTGAILEYIE 419



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 35/242 (14%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG G  G+LGLGS ++    P +    +H +                        +  IA
Sbjct: 38  WGNGDFGRLGLGS-LESQWRPAVCSAFDHHS------------------------LVAIA 72

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGG H+  +T++G +   G   +GQ G     +        S +  ++  IAAG +H+  
Sbjct: 73  CGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPKKIIHIAAGYYHSAA 132

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           I+ +G +Y++G N  GQLG G   A  V    +   L     K+V+ G+ HS   T+ G+
Sbjct: 133 ITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGE 192

Query: 416 VLSWGWNKYGQLGLGD---------SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
            LSWG    G+LG G          +     P L+  + G   +N+A G  H+  + E  
Sbjct: 193 ALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENG 252

Query: 466 QI 467
            +
Sbjct: 253 SV 254



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 29/154 (18%)

Query: 9   EENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
           +EN  +    E  +  +G+    +     ++S +P       S +  CGG        S 
Sbjct: 249 DENGSVFIFGERAMDKFGFREAKNATAPSMISELPY------SKQVACGGY--HTCVISS 300

Query: 69  SGKLITWGSADD--EGQSYLTSGKHGETPE-PFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
           SG+L TWGS ++   G  ++ +    E  E PF   ++  V + + GW H  +++E G V
Sbjct: 301 SGELFTWGSNENGCLGMGFMETIHFPERIEGPF---SKNPVSQVSCGWKHTAAISE-GNV 356

Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKD--STGKQ 157
           +TWGW             GS G+F  D  S+G Q
Sbjct: 357 FTWGWG------------GSYGTFSDDGHSSGGQ 378


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
           catus]
          Length = 4844

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3055 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3097

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3098 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3149

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3150 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3209

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3210 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3267

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3268 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3327

Query: 457  HTL 459
            H++
Sbjct: 3328 HSV 3330



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4037 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4096

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                     +V 
Sbjct: 4097 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVV 4156

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4157 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4216

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4217 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4274

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4275 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4324



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 142/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4052 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4111

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G  +
Sbjct: 4112 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHHV 4155

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              VA  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4156 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4198

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4199 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4250

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4251 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4308

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4309 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4343



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 3006 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3063

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3064 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3113

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3114 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3173

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3174 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3214

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3215 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3268

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3269 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3326

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3327 SHSVAWT 3333



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4013

Query: 284  GK----------------------------AGRSYVKEIAC--GGRHSAVVTDAGALLTF 313
            GK                                ++K++A   GG+H   ++  G + ++
Sbjct: 4014 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4073

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4074 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4133

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+      V+CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4134 GHSDSEDQLKPKLVEA--LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4191

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4192 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4225



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2947 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2997

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2998 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3037

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3038 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3097

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3098 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3155

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3156 LLGHRVIQVACGSRDAQTLALTDE 3179



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPAAL--PGLDTKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4215 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4273

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4274 CTEDGEVYTWG 4284



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPVLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPAALPGLD 760



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4062 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4113

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4114 ACVTAAGDLYTWG 4126


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3141

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3202 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3259

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 457  HTL 459
            H++
Sbjct: 3320 HSV 3322



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4264

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4189 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4240

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4298

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4299 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4333



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3260

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3261 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3318

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3319 SHSVAWT 3325



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4003

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4124 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2939 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2989

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2990 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3029

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3030 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3089

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3090 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDE 3171



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3040 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3082

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3083 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3134

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3135 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3194

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3195 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3252

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3253 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3312

Query: 457  HTL 459
            H++
Sbjct: 3313 HSV 3315



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 3969 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4028

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4029 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4088

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4089 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4148

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4149 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4206

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4207 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4256



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 3984 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4043

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4044 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4087

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4088 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4130

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4131 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4182

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4183 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4240

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4241 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4275



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2991 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3048

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3049 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3098

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3099 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3158

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3159 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3199

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3200 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3253

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3254 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3311

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3312 SHSVAWT 3318



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 7/180 (3%)

Query: 290  YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
            ++K++A   GG+H   ++  G + ++G    G+ GHG+ +   RP    SL  I+V  +A
Sbjct: 3980 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4039

Query: 348  AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
            AG  H+ C++  G +Y +G  ++G+LG    + +  PKL+E   L+  R   ++CG+   
Sbjct: 4040 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDA 4097

Query: 406  HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
             +  LT+D  V SWG   YG+LG G S    +P  +  + G     + CG   ++ L ++
Sbjct: 4098 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4157



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2932 NSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2982

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2983 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3022

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3023 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3082

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3083 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3140

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3141 LLGHRVIQVACGSRDAQTLALTDE 3164



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4147 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4205

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4206 CTEDGEVYTWG 4216



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 3983 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 4034

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   VT AG++YTWG
Sbjct: 4035 VVDVAAGGAHSACVTAAGDLYTWG 4058


>gi|198421655|ref|XP_002121487.1| PREDICTED: similar to hect domain and RLD 4 [Ciona intestinalis]
          Length = 1029

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 119/254 (46%), Gaps = 36/254 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           V I  +A G  H L + D G+V+GWG   + QLG        P+P  I  L +       
Sbjct: 77  VHIVDIALGDSHILAIDDKGKVYGWGGNDKDQLGWTDG-NCYPSPKKIKSLSNK------ 129

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQL 330
                              + ++ACG  HS  +   GAL + G   YGQ G G  ++ +L
Sbjct: 130 -------------------IVQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSSTEL 170

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
           RP    SL  I   QI+AG WH+ C++  G V+ +G N  GQLG G     NVP LL+  
Sbjct: 171 RP--LISLKGIPFSQISAGFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNVPVLLKA- 227

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-----IHG 445
            L S   K +  G  H+A LT DG V ++G N++GQLG G S    +P   P     + G
Sbjct: 228 -LRSLSVKYICAGELHTAALTLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMG 286

Query: 446 FLPRNIACGWWHTL 459
                IACG  HT+
Sbjct: 287 NEVTQIACGAQHTV 300



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 113/247 (45%), Gaps = 37/247 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           KI +VA G  H+L L   G +W  G    GQLG G +                +S + RP
Sbjct: 129 KIVQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDK----------------SSTELRP 172

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
           L+  +G   S          +I+ G  HS  VT +GA+  +G    GQ G G   D+  P
Sbjct: 173 LISLKGIPFS----------QISAGFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNVP 222

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               +L  + V+ I AG  HT  ++++G V+ FG NQFGQLG G    E +P      I 
Sbjct: 223 VLLKALRSLSVKYICAGELHTAALTLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIF 282

Query: 393 ESKRAKV--VSCGARHSAVLT-EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
           E    +V  ++CGA+H+     + G V ++G N + QLG        IP   P   F+P 
Sbjct: 283 ELMGNEVTQIACGAQHTVCYVGKTGNVYTFGNNNHSQLGY-------IPKH-PRSEFVPH 334

Query: 450 NIACGWW 456
            ++   W
Sbjct: 335 PLSSDMW 341



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 120/291 (41%), Gaps = 70/291 (24%)

Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG--------WRE--CVPSAKVTRDFGSA------GSF 149
           +V  A G +H +++ + G+VY WG        W +  C PS K  +   +       G  
Sbjct: 79  IVDIALGDSHILAIDDKGKVYGWGGNDKDQLGWTDGNCYPSPKKIKSLSNKIVQVACGHS 138

Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
                G   AL                      S+          GD+  T    L++L 
Sbjct: 139 HSLFLGSNGAL---------------------WSAGSNNYGQLGFGDKSSTELRPLISLK 177

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
            G+  ++++AG  H+  ++  G V+ WG    GQLGLG             C++     +
Sbjct: 178 -GIPFSQISAGFWHSFCVTHSGAVFCWGRNDNGQLGLGD------------CVD-----R 219

Query: 270 DRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
           + P+L+         KA RS  VK I  G  H+A +T  G + TFG   +GQ GHGS+  
Sbjct: 220 NVPVLL---------KALRSLSVKYICAGELHTAALTLDGGVFTFGSNQFGQLGHGSSGP 270

Query: 329 Q----LRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLG 374
           +      P     LM  +V QIA G  HTVC +   G VY FG N   QLG
Sbjct: 271 EPLPVSTPRKIFELMGNEVTQIACGAQHTVCYVGKTGNVYTFGNNNHSQLG 321



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 9/178 (5%)

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
           G++ +K +      +  + + G + TFG       GH + + ++     S+L  + +  I
Sbjct: 29  GKTIIKSVRVSRTIAVFLLEDGTVHTFG-AENDNIGHSAGSTKV-----SALETVHIVDI 82

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G  H + I  +G+VY +GGN   QLG         PK +++    S +   V+CG  H
Sbjct: 83  ALGDSHILAIDDKGKVYGWGGNDKDQLGWTDGNCYPSPKKIKSL---SNKIVQVACGHSH 139

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           S  L  +G + S G N YGQLG GD     +  L+ + G     I+ G+WH+  +  +
Sbjct: 140 SLFLGSNGALWSAGSNNYGQLGFGDKSSTELRPLISLKGIPFSQISAGFWHSFCVTHS 197


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3141

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3202 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3259

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 457  HTL 459
            H++
Sbjct: 3320 HSV 3322



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4264

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4189 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4240

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4298

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4299 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4333



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3260

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3261 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3318

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3319 SHSVAWT 3325



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4003

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4124 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2939 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2989

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2990 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3029

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3030 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3089

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3090 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDE 3171



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3141

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3202 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3259

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 457  HTL 459
            H++
Sbjct: 3320 HSV 3322



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4264

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4189 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4240

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4298

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4299 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4333



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3260

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3261 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3318

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3319 SHSVAWT 3325



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4003

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4124 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2939 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2989

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2990 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3029

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3030 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3089

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3090 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDE 3171



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 4092

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   VT AG++YTWG
Sbjct: 4093 VVDVAAGGAHSACVTAAGDLYTWG 4116


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3141

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3202 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3259

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 457  HTL 459
            H++
Sbjct: 3320 HSV 3322



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4264

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4189 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4240

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4298

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4299 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4333



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3260

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3261 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3318

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3319 SHSVAWT 3325



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4003

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4124 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2939 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2989

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2990 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3029

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3030 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3089

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3090 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDE 3171



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3141

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3202 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3259

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 457  HTL 459
            H++
Sbjct: 3320 HSV 3322



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4264

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4189 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4240

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4298

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4299 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4333



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3260

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3261 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3318

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3319 SHSVAWT 3325



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4003

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4124 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2939 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2989

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2990 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3029

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3030 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3089

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3090 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDE 3171



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274



 Score = 42.4 bits (98), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 37/247 (14%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           L++ + G+ + K+A G  HT I+S +G+++ +GYG  G LG G    +V  P  +  L  
Sbjct: 332 LISTSDGISVLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVH-PKEVESLRG 390

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA----------GALLTFG 314
                                   S  K +ACG  H+A + +           G L T+G
Sbjct: 391 ------------------------SRAKSVACGPWHTAAIVETSGTLKSSAPGGKLFTWG 426

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
               G+ GH +   +L P+   SL+D    Q++ G+  T  +++ G V+  G  + GQLG
Sbjct: 427 DAGGGKLGHTNKKSKLVPTRVESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLG 486

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
                  ++  ++E P L+++  K +SCG+ H AVLT +G+V +WG    GQLGLGD +D
Sbjct: 487 NSRSDNTSIC-MVEGP-LKTEFVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLGLGDYVD 544

Query: 435 RNIPSLV 441
           R+ P+LV
Sbjct: 545 RSSPTLV 551



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 4/178 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACG +H+A+VT  G + ++G    G+ GH +++    P    SL    V+ IA G 
Sbjct: 234 VQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFGA 293

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARHSA 408
            +T  +SV G +Y +G      LG G +Q +  P      I  S    V  ++CG  H+A
Sbjct: 294 KYTCAVSVSGELYEWGEG-IHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTA 352

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
           +++  G++ ++G+  +G LG GD+     P  V  + G   +++ACG WHT  + ET+
Sbjct: 353 IISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVESLRGSRAKSVACGPWHTAAIVETS 410



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 120/315 (38%), Gaps = 69/315 (21%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-FPLPTEA-----SVVKAAAG 112
           G  +  A S SG+L  WG    EG   L  GK+     P FP    +     SV+K A G
Sbjct: 292 GAKYTCAVSVSGELYEWG----EGIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACG 347

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
             H   ++  G++YT+G+            FG  G     S       P E       RA
Sbjct: 348 QWHTAIISSLGKLYTYGYGT----------FGVLGHGDTHSV----VHPKEVESLRGSRA 393

Query: 173 GEEVVKRRKTSSAREES---ENPASGDEFFT-----------------LSPCLVTLNPGV 212
                    T++  E S   ++ A G + FT                 L P  V      
Sbjct: 394 KSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDC 453

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
             T+V+ G   T +L+  G V+  G    GQLG                    +   +  
Sbjct: 454 DFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLG-------------------NSRSDNTS 494

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
           + + +G + +       +VK+I+CG  H AV+T  G + T+G G  GQ G G   D+  P
Sbjct: 495 ICMVEGPLKTE------FVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLGLGDYVDRSSP 548

Query: 333 SYASSLMDIQVEQIA 347
           +   +L D QV+ IA
Sbjct: 549 TLVEALEDKQVDSIA 563



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 14/160 (8%)

Query: 313 FGWG--LYGQCGHG---STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           F WG  L     HG   +TN  L P    S   + V+ IA G  H   ++ +G+V+ +G 
Sbjct: 200 FVWGDVLGRMSDHGHVPATNISL-PRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGE 258

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
              G+LG     + + PK++++  L S   K ++ GA+++  ++  G++  WG   +  L
Sbjct: 259 ENGGRLGHKTSDSVSDPKIIDS--LASTPVKTIAFGAKYTCAVSVSGELYEWGEGIHS-L 315

Query: 428 GLGDSIDRNIP----SLVPI-HGFLPRNIACGWWHTLLLA 462
           G G +  +  P     L+    G     IACG WHT +++
Sbjct: 316 GFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTAIIS 355


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 118/248 (47%), Gaps = 28/248 (11%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            I  V+ G  HTL L+D GQV+ WG   +GQLGL    + +  P  I  L          
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQ------ 138

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLR 331
                             + ++ACG  HS  ++ A  +  +G   YGQ G G     Q  
Sbjct: 139 ------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P    SL+ I   Q+AAG  H+  +++ G ++ +G N+FGQLG   +    VP LL++  
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS-- 238

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFLPRN 450
           L S++   + CG  H+A LT++G V ++G   YGQLG    S + N   +  + G +   
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298

Query: 451 IACGWWHT 458
           +ACG  HT
Sbjct: 299 VACGRQHT 306



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 128/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G + ++G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYSWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFANKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY+WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E          E +   R   S  +                        
Sbjct: 111 DSDGQLGLLGSE----------EYIRVPRNIKSLSD------------------------ 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       V+CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +    + +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV SWG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 179/431 (41%), Gaps = 48/431 (11%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAG 123
           A + SG ++ WG  +D GQ  L  G       P  +    S V A AAG  H  ++T +G
Sbjct: 67  ALTGSGGVMCWG-GNDFGQ--LGDGTPTTRSTPGAVSGLPSGVTAIAAGNYHTCALTGSG 123

Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
            V  WG       A  +   G+  +F + + G  S LP+     +    G+       + 
Sbjct: 124 GVRCWG-------ANYSGQLGNGLTFGRSTPGAVSGLPS--GVTAIAAGGDHTCALMSSG 174

Query: 184 SAREESENPAS--GDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
                 +N     GD   T   +P  V+  P   +T +AAGG HT  L+  G+VW WGY 
Sbjct: 175 GVMCWGDNYYGQLGDGTTTNRRTPVAVSGLP-SGVTAIAAGGLHTCALTGSGEVWCWGYN 233

Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEH-----AASGKDRPLLVRQGSV-----NSSGKAGR- 288
             GQLG G+      TP  +  L       AA G     L+  G V     N SG+ G  
Sbjct: 234 YYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDG 293

Query: 289 ---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                          S V  IA G  H+  +T +G +  +G   +GQ G G+T  +  P+
Sbjct: 294 SDTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPA 353

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
             S L    VE IAAG +HT  +   G V+ +G N  GQLG G   A + P  +    L 
Sbjct: 354 AVSGLPS-GVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSG--LP 410

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC 453
           S     ++ G  H+  L   G V  WG N  GQLG G   D + P  V         IA 
Sbjct: 411 SG-VTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVETIAA 469

Query: 454 GWWHTLLLAET 464
           G WHT  L  +
Sbjct: 470 GGWHTCALTSS 480



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 166/406 (40%), Gaps = 50/406 (12%)

Query: 68  ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAGEVY 126
            SG +  WG  +D GQ  L  G   ++  P  +    S V A AAG  H  ++T +GEV+
Sbjct: 275 SSGGVWCWGR-NDSGQ--LGDGSDTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGSGEVW 331

Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT--EQAPPSDKRAGEEVVKRRKTSS 184
            WG              G   +  + +    S LP+  E     D      +        
Sbjct: 332 CWG-------GNGFGQLGDGTTTARSTPAAVSGLPSGVETIAAGDYHTCALMSSGGVWCW 384

Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
            R  S     G      +P  V+  P   +T +AAGG HT  L   G VW WG    GQL
Sbjct: 385 GRNNSGQLGDGTTTARSTPAAVSGLP-SGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQL 443

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G GS                       P+ V       SG A  S V+ IA GG H+  +
Sbjct: 444 GDGSDTD-----------------SSTPVAV-------SGLA--SGVETIAAGGWHTCAL 477

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
           T +G +  +G    GQ G GST   + P   S L    V  IAAG +HT  ++  G V+ 
Sbjct: 478 TSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGDYHTCALTGSGGVWC 536

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G N  GQLG G     + P  +      +    V++ G  H+  LT  G V  WG N  
Sbjct: 537 WGYNLSGQLGDGTTTDRSTPVAVSG---LTSGVTVIAAGRFHTCALTSSGGVWCWGANFD 593

Query: 425 GQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAETTQI 467
           GQLG G + +R  P  V + G LP     IA G WHT  L  + ++
Sbjct: 594 GQLGDGTTTNRTTP--VAVSG-LPSGVTAIAAGGWHTCALTSSGEV 636



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 117/257 (45%), Gaps = 36/257 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           +  +AAGG HT  L+  G VW WG    GQLG GS I      H+ P    A SG     
Sbjct: 464 VETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIY-----HITPV---AVSGLP--- 512

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                          S V  IA G  H+  +T +G +  +G+ L GQ G G+T D+  P 
Sbjct: 513 ---------------SGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPV 557

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
             S L    V  IAAG +HT  ++  G V+ +G N  GQLG G       P  +    L 
Sbjct: 558 AVSGLTS-GVTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSG--LP 614

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN--- 450
           S     ++ G  H+  LT  G+V  WG N YGQLG G + +R+ P  V     LP     
Sbjct: 615 SG-VTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVS---GLPSGVTA 670

Query: 451 IACGWWHTLLLAETTQI 467
           IA GW HT  L  + ++
Sbjct: 671 IAAGWEHTCALTSSGEV 687



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 121/278 (43%), Gaps = 30/278 (10%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R  S     G   + ++P  V+  P   +T +AAG  HT  L+  G VW WGY   GQLG
Sbjct: 488 RNNSGQLGDGSTIYHITPVAVSGLP-SGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLG 546

Query: 246 LGS---RIKMVPTPHLIPCLEHAASGKDRPL-LVRQGSV-----NSSGKAGR-------- 288
            G+   R   V    L   +   A+G+     L   G V     N  G+ G         
Sbjct: 547 DGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTT 606

Query: 289 --------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
                   S V  IA GG H+  +T +G +  +G   YGQ G G+T ++  P   S L  
Sbjct: 607 PVAVSGLPSGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS 666

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
             V  IAAG  HT  ++  G V+ +G N +GQLG G     + P  +    L S     +
Sbjct: 667 -GVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSG--LPSG-VTAI 722

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           + G  H+  LT  G V+ WG N  GQLG G  + R  P
Sbjct: 723 AAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTP 760



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 126/291 (43%), Gaps = 38/291 (13%)

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-- 264
           + +P   +T +AAGG HT  L+  G V  WG    GQLG G+      TP  +  L    
Sbjct: 48  SFSPLQGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTR-STPGAVSGLPSGV 106

Query: 265 ---AASGKDRPLLVRQGSV-----NSSGKAGR----------------SYVKEIACGGRH 300
              AA       L   G V     N SG+ G                 S V  IA GG H
Sbjct: 107 TAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAIAAGGDH 166

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           +  +  +G ++ +G   YGQ G G+T ++  P   S L    V  IAAG  HT  ++  G
Sbjct: 167 TCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPS-GVTAIAAGGLHTCALTGSG 225

Query: 361 RVYVFGGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
            V+ +G N +GQLG G    + + P  +    L S    + + G  H+  L   G V  W
Sbjct: 226 EVWCWGYNYYGQLGDGTTTYSRSTPAAVGG--LPSGMTAIAA-GGLHTCALMSSGGVWCW 282

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAETTQI 467
           G N  GQLG G   D + P  V + G LP     IA G +HT  L  + ++
Sbjct: 283 GRNDSGQLGDGSDTDSSTP--VAVSG-LPSGVTAIAAGDYHTCALTGSGEV 330



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 53/109 (48%), Gaps = 4/109 (3%)

Query: 334 YASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
           + SS   +Q V  IAAG  HT  ++  G V  +GGN FGQLG G     + P  +    L
Sbjct: 45  HTSSFSPLQGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSG--L 102

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            S     ++ G  H+  LT  G V  WG N  GQLG G +  R+ P  V
Sbjct: 103 PSG-VTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAV 150



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 109/266 (40%), Gaps = 32/266 (12%)

Query: 22  VYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
           V+ WGY L G   + +      P  + G  S   V   G     A + SG +  WG A+ 
Sbjct: 534 VWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWG-ANF 592

Query: 81  EGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
           +GQ    +  +  TP     LP+  + + AA GW H  ++T +GEV+ WG          
Sbjct: 593 DGQLGDGTTTNRTTPVAVSGLPSGVTAI-AAGGW-HTCALTSSGEVWCWG-------DNY 643

Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF 199
               G   +  + + G  S LP+     +   AG E      T +     E    GD ++
Sbjct: 644 YGQLGDGTTTNRSTPGAVSGLPSGV---TAIAAGWE-----HTCALTSSGEVWCWGDNYY 695

Query: 200 TLSPCLVTLN---PGV------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
                  T N   PG        +T +AAG  HT  L+  G V  WG  G+GQLG G R 
Sbjct: 696 GQLGDGTTTNRSTPGAVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDG-RP 754

Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVR 276
               TP  +  +  A+ G   P+++R
Sbjct: 755 LYRTTP--VDVVTSASWGVYLPMIIR 778


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3141

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3202 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3259

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 457  HTL 459
            H++
Sbjct: 3320 HSV 3322



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4264

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4189 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4240

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4298

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4299 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4333



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3260

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3261 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3318

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3319 SHSVAWT 3325



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4003

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4124 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2939 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2989

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2990 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3029

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3030 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3089

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3090 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDE 3171



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3141

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3202 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3259

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 457  HTL 459
            H++
Sbjct: 3320 HSV 3322



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4264

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4189 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4240

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4298

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4299 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4333



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3260

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3261 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3318

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3319 SHSVAWT 3325



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4003

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4124 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2939 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2989

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2990 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3029

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3030 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3089

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3090 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDE 3171



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 4092

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   VT AG++YTWG
Sbjct: 4093 VVDVAAGGAHSACVTAAGDLYTWG 4116


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 118/248 (47%), Gaps = 28/248 (11%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            I  V+ G  HTL L+D GQV+ WG   +GQLGL    + +  P  I  L          
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQ------ 138

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLR 331
                             + ++ACG  HS  ++ A  +  +G   YGQ G G     Q  
Sbjct: 139 ------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P    SL+ I   Q+AAG  H+  +++ G ++ +G N+FGQLG   +    VP LL++  
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS-- 238

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFLPRN 450
           L S++   + CG  H+A LT++G V ++G   YGQLG    S + N   +  + G +   
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298

Query: 451 IACGWWHT 458
           +ACG  HT
Sbjct: 299 VACGRQHT 306



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 128/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G + ++G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYSWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFANKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY+WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E          E +   R   S  +                        
Sbjct: 111 DSDGQLGLLGSE----------EYIRVPRNIKSLSD------------------------ 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       V+CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +    + +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV SWG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3142

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3203 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3260

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 457  HTL 459
            H++
Sbjct: 3321 HSV 3323



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 131/315 (41%), Gaps = 57/315 (18%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGA 4103

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4104 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4147

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              VA  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4148 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4190

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4191 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4242

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC S +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4243 RQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4300

Query: 393  ESKRAKVVSCGARHS 407
            + K+   V+CG+ H+
Sbjct: 4301 QGKKVNRVACGSAHT 4315



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 36/291 (12%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      P +I
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR-SPCDRPRVI 4087

Query: 260  PCL------EHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYV 291
              L      + AA G     +   G + +   G+ GR                      V
Sbjct: 4088 ESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRV 4147

Query: 292  KEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
             ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G
Sbjct: 4148 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4207

Query: 350  LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
               +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H   
Sbjct: 4208 SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVC 4265

Query: 410  LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
             +EDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4266 CSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3056

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3057 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3106

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3207

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3208 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3261

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3262 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3319

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3320 SHSVAWT 3326



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C   AA    RP+ +  G     +V + 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----CEALAAL---RPVQLIGGEQTLFAVTAD 4005

Query: 284  GK----------------------------AGRSYVKEIAC--GGRHSAVVTDAGALLTF 313
            GK                                ++K++A   GG+H   ++  G + ++
Sbjct: 4006 GKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4065

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL   +V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4066 GEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4126 GHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I + AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2940 NSGSLIRRKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2990

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2991 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3030

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 3031 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3090

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 3091 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3148

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 3149 LLGHRVIQVACGSRDAQTLALTDE 3172



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPSAL--PGLDTKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 119  VTEAGEVYTWG 129
             +E GEVYTWG
Sbjct: 4266 CSEDGEVYTWG 4276



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPSALPGLD 760



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4054 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4105

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4106 ACVTAAGDLYTWG 4118


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 122/249 (48%), Gaps = 30/249 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L LS  G V+ WG G +G+LG G+R+                   DR
Sbjct: 4040 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY-----------------DR 4082

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+ +         G   V +IACGG HSA +T AG L T+G G YG+ GHG + DQL 
Sbjct: 4083 PKLIEE-------LLGTEIV-DIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLT 4134

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L D +V  +A  +G   T+C++ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 4135 PKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIES 4194

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIHGFLP 448
              L       V CG++ S  LT  G + +WG   Y +LG G D   R    +  + G   
Sbjct: 4195 --LAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4252

Query: 449  RNIACGWWH 457
             +IA G  H
Sbjct: 4253 ISIATGSLH 4261



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 134/310 (43%), Gaps = 82/310 (26%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   V +GG+H L L+  G+V+ WG G +G+LG G+ I +                 D+
Sbjct: 3021 IKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISL-----------------DK 3063

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       S K+ R  +++IACG  HSA +T +G L T+G G YG+ GHG T  Q +
Sbjct: 3064 PRLIE------SLKSKR--IRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSK 3115

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGT-------------- 375
            P    SL+  ++ QIA G     T+ ++ +G VY +G   FG+LG               
Sbjct: 3116 PKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDR 3175

Query: 376  --------------------------------------GVDQAENVPKLLETPILESKRA 397
                                                  G D     P L+E   L  K+ 
Sbjct: 3176 LNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG--LRGKKV 3233

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +I    PSLV  +       ++CG  
Sbjct: 3234 IHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSS 3293

Query: 457  HTLLLAETTQ 466
            H++    T Q
Sbjct: 3294 HSIAWVLTDQ 3303



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 28/259 (10%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +K   +A G +   ++S  G+++  G G  G+LGLG     V  P  IP L         
Sbjct: 2967 LKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDD-SNVCEPKPIPFLSQ------- 3018

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
              ++++ SV+S              GG+H+  +T  G + ++G G  G+ GHG++    +
Sbjct: 3019 -YVIKKVSVHS--------------GGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDK 3063

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P    SL   ++  IA G  H+  I+  G +Y +G  ++G+LG G    ++ PKL+++  
Sbjct: 3064 PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQS-- 3121

Query: 392  LESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
            L  +R   ++CG+R   +  LT DG V SWG   +G+LG G S     P L+  ++G   
Sbjct: 3122 LVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV 3181

Query: 449  RNIACGWWHTLLLAETTQI 467
              I CG   +L L +  ++
Sbjct: 3182 VQIECGAQFSLALTKYGEV 3200



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 173/416 (41%), Gaps = 66/416 (15%)

Query: 18   KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
            + + VY+WG         L G S  K P+ S + ++L      K V   GG       S+
Sbjct: 2932 QHSAVYVWGLNDKDQLGGLKG-SKIKLPVYSEVLSKL------KPVHIAGGSKTLFVVSQ 2984

Query: 69   SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
             GKL   G   + G+  L    +   P+P P  ++  + K +  +G  H +++T+ G+V+
Sbjct: 2985 EGKLYACGEGTN-GRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVF 3043

Query: 127  TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
            +WG  E           G   S   D      +L +++       +G        TSS  
Sbjct: 3044 SWGEGE-------DGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAI---TSSGE 3093

Query: 187  E------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGY 238
                   E      GD      P LV    G +I ++A G R   T+ L+  G V+ WG 
Sbjct: 3094 LYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGD 3153

Query: 239  GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
            G  G+LG G                  + G   PLL+ +  +N  G      V +I CG 
Sbjct: 3154 GDFGKLGRG-----------------GSDGCYTPLLIDR--LNGLG------VVQIECGA 3188

Query: 299  RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            + S  +T  G + T+G G Y + GHG+ +   +P+    L   +V  +A G  H + ++ 
Sbjct: 3189 QFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD 3248

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA--VLTE 412
             G+VY +G N  GQ G G       P L+    L+  R   VSCG+ HS   VLT+
Sbjct: 3249 IGQVYAWGDNDHGQQGNGTTIVNKKPSLVHE--LDDARVNRVSCGSSHSIAWVLTD 3302



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 30/252 (11%)

Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
           + G H L L+    V+ WG G  G+LG G R                 +  D P L+ + 
Sbjct: 512 SDGTHYLALTQDNSVYSWGNGDGGRLGHGDR-----------------AWYDEPKLI-EA 553

Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
            V  +       +  IACG  +SA ++  G L T+G G YG+ GHG++++ + P+  ++L
Sbjct: 554 LVEKN-------ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTAL 606

Query: 339 MDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
               V  +A  +G   T+C++  G V+ +G   +G+LG G       PK+++  +L+   
Sbjct: 607 NGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDK-LLDINV 665

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGW 455
           AKV  CG + SA LT  G+V +WG  +  +LG G+      P ++ I      + +  G 
Sbjct: 666 AKVY-CGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGN 724

Query: 456 WHTLLLAETTQI 467
            H L L E   I
Sbjct: 725 LHVLALTEDQLI 736



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 34/265 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD  +   P L+       IT +A G  ++  LS  G+++ WG G  G+LG G+   +  
Sbjct: 540 GDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNV-- 597

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLT 312
              +IP L  A +G                      V  +ACG     +  VT +G + +
Sbjct: 598 ---MIPTLVTALNGH--------------------MVVYVACGSGDSQTLCVTASGIVFS 634

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G YG+ G G  +    P     L+DI V ++  G   +  ++  G VY +G  +  +
Sbjct: 635 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYR 694

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL--GLG 430
           LG G +     PK+++  IL++K+ K +  G  H   LTED  +  WG N YGQ+   LG
Sbjct: 695 LGHGNEDHVRYPKIID--ILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQIDPALG 752

Query: 431 DSIDRNIPSLVP-IHGFLPRNIACG 454
             +    P+L P + G     +ACG
Sbjct: 753 TVVPE--PTLCPTLSGKNVIGLACG 775



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 30/223 (13%)

Query: 220  GGRHTLI-LSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
            GG  TL  ++  G+V+  GYG  G+LG+G +   MVPT  L+  ++H        + V++
Sbjct: 3993 GGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPT--LLESIQH--------VFVKK 4042

Query: 278  GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
             +VNS              GG+H   ++  G + ++G G  G+ GHG+     RP     
Sbjct: 4043 VAVNS--------------GGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEE 4088

Query: 338  LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
            L+  ++  IA G  H+  I+  G +Y +G  ++G+LG G  + +  PKL+E   L+  + 
Sbjct: 4089 LLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEA--LQDYKV 4146

Query: 398  KVVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
              V+CG+  +  L  T+D  V SWG   YG+LG G S    IP
Sbjct: 4147 IDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIP 4189



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 29/215 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L+P L+      K+  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 4127 GDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG----- 4181

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G   P+ +          AG   VK + CG + S  +T +GA+ T
Sbjct: 4182 ------------GSDGCKIPMKIE-------SLAGLGVVK-VECGSQFSVALTRSGAIYT 4221

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHG+ +   RP   ++L   ++  IA G  H V  + +G V+ +G N  GQ
Sbjct: 4222 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4281

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            LG G   A   P+L+    L+ K+   V+CG+ H+
Sbjct: 4282 LGDGTTSALQRPRLVHA--LQGKKITRVACGSAHT 4314



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P Y+  L  ++   IA G      +S EG++Y  G    G+LG G D     PK +  P 
Sbjct: 2958 PVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPI--PF 3015

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K VS   G +H+  LT+DG+V SWG  + G+LG G+SI  + P L+  +     
Sbjct: 3016 LSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRI 3075

Query: 449  RNIACGWWHT 458
            R+IACG  H+
Sbjct: 3076 RDIACGSGHS 3085



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 1/153 (0%)

Query: 307  AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            +GA+  +G    GQ G         P    SL  ++  Q+  G      ++ +G+VY  G
Sbjct: 3952 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 4011

Query: 367  GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
                G+LG G   +  VP LLE+      +   V+ G +H   L+ +G V SWG    G+
Sbjct: 4012 YGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4071

Query: 427  LGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            LG G+ +  + P L+  + G    +IACG  H+
Sbjct: 4072 LGHGNRLSYDRPKLIEELLGTEIVDIACGGHHS 4104



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A + SG + TWG  D     + T   H   P          ++  A G  HCV+
Sbjct: 4206 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4264

Query: 119  VTEAGEVYTWG 129
             T+ GEV+TWG
Sbjct: 4265 CTDKGEVFTWG 4275



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 77/218 (35%), Gaps = 70/218 (32%)

Query: 56   CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
            CG G    L  ++   + +WG  D     Y   G+ G      P+  E+     VVK   
Sbjct: 4151 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVVKVEC 4205

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G    V++T +G +YTWG                 G + +   G                
Sbjct: 4206 GSQFSVALTRSGAIYTWG----------------KGDYHRLGHG---------------- 4233

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
              + V + RK ++ +                        G KI  +A G  H +  +D G
Sbjct: 4234 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACTDKG 4269

Query: 232  QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
            +V+ WG   EGQLG G+    +  P L+    HA  GK
Sbjct: 4270 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4302


>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
           rubripes]
          Length = 527

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 114/223 (51%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L+P LV+ N  G ++ +VA G  HT+ L+  G+V+ WGY   GQ+G GS     PTP  +
Sbjct: 116 LTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ-PTPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D+G +  +G+   
Sbjct: 175 SSCLQNKV------------------------VVNIACGQLCSMAVLDSGEIYGWGYNCN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G+  +Q  P   ++L  + V Q+A G  HT+ ++ EG VY +G N +GQLGTG  
Sbjct: 211 GQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNK 270

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             + VP L+ T   + + ++V +C   H SA  T+ GQVL WG
Sbjct: 271 CNQAVPTLINTE--KERMSEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 120/249 (48%), Gaps = 28/249 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  + +  G KI  ++ G G H  I +  G+V+ WG+ G  QLG G+    +
Sbjct: 57  GDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGTSTHGL 116

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
            TP L+                   S N  GK     V E+ACG  H+  +T  G +  +
Sbjct: 117 -TPALV-------------------STNLLGKR----VIEVACGSHHTIALTTDGEVFAW 152

Query: 314 GWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G GST +Q  P   SS L +  V  IA G   ++ +   G +Y +G N  GQ
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQ 212

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G +  +  P       L+      V+CG  H+  LT++G V SWG N YGQLG G+ 
Sbjct: 213 LGLGNNGNQQTP--CRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNK 270

Query: 433 IDRNIPSLV 441
            ++ +P+L+
Sbjct: 271 CNQAVPTLI 279



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 118/311 (37%), Gaps = 87/311 (27%)

Query: 46  LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTE 103
           LCG        G G   A+AT++ G++ +WG     G S L +G   HG TP        
Sbjct: 71  LCGKKIVSLSYGTGPHVAIATAD-GEVFSWGH---NGYSQLGNGTSTHGLTPALVSTNLL 126

Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
              V++ A G  H +++T  GEV+ WG+              ++G     ST  Q     
Sbjct: 127 GKRVIEVACGSHHTIALTTDGEVFAWGYN-------------NSGQVGSGSTANQ----- 168

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
               P+ +R                             +S CL        +  +A G  
Sbjct: 169 ----PTPRR-----------------------------VSSCL----QNKVVVNIACGQL 191

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            ++ + D G+++GWGY   GQLGLG+           PC   A  G +            
Sbjct: 192 CSMAVLDSGEIYGWGYNCNGQLGLGNN-----GNQQTPCRIAALQGVN------------ 234

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                   V ++ACG  H+  +TD G + ++G   YGQ G G+  +Q  P+  ++  +  
Sbjct: 235 --------VIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQAVPTLINTEKERM 286

Query: 343 VEQIAAGLWHT 353
            E  A    HT
Sbjct: 287 SEVAACHTSHT 297



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 18/171 (10%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    P P R+      K V    CG   ++A  +SG++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           +  GQ  L +  + +TP         +V++ A G+AH +++T+ G VY+WG         
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWG--------- 258

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
               +G  G+  K +    + + TE+   S+  A         TS+A+ +S
Sbjct: 259 -ANSYGQLGTGNKCNQAVPTLINTEKERMSEVAA----CHTSHTSAAKTQS 304


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 443 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 501

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 502 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 541

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 542 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 601

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 602 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 659

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 660 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 692



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 556 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 614

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 615 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 650

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 651 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 710

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 711 KPEPAAL--PGLDTKHIVGIACGPAQS 735



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 620 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 678

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 679 GSTHCLALTEDSEVHSWG 696



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 478 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 534

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 535 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 585

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 586 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 635

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 636 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 695

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 696 GSNDQCQHFDTLRVTK-PEPAALPGLD 721


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 131/273 (47%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G    + ++  G+V+ +G   +G+LG 
Sbjct: 581 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGR 640

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 641 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV 698

Query: 436 NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 699 RYPKLLEALQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 132/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------ 264
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  +  L        
Sbjct: 2695 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKV 2754

Query: 265  --AASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 2755 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 2814

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 2815 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2874

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  NVP+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 2875 EGLVFSWGDGDFGKLGRGGSEGCNVPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 2932

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + +  Q+
Sbjct: 2933 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQV 2982



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 2751 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 2793

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 2794 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 2845

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  NV      
Sbjct: 2846 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIER 2905

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 2906 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 2963

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 2964 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3023

Query: 457  HTL 459
            H++
Sbjct: 3024 HSV 3026



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 121/247 (48%), Gaps = 35/247 (14%)

Query: 202  SPC--LVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            +PC  L TL P   I     GG  TL  ++  G+++  GYG  G+LG     + V  P L
Sbjct: 3656 TPCEALATLRPVQLI-----GGEQTLFAVTADGKLYATGYGAGGRLG-VGGTESVSAPTL 3709

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + +R+ +VNS              GG+H   ++  G + ++G    
Sbjct: 3710 LESIQH--------VFIRKVAVNS--------------GGKHCLALSSEGEVYSWGEAED 3747

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+ +   RP    SL   +V  IAAG  H+ C++  G +Y +G  ++G+LG    
Sbjct: 3748 GKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSDS 3807

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + +  PKL+E   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G S    
Sbjct: 3808 EDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 3865

Query: 437  IPSLVPI 443
            +P  VP+
Sbjct: 3866 VPMKVPL 3872



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 151/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 2702 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGMSSGTVPIPRQVTALSSYVVKK 2753

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H  ++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 2754 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 2803

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 2804 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 2863

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 2864 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNVPQNIER- 2905

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHGS     +P     L
Sbjct: 2906 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 2958

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 2959 RGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3016

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3017 RVACGSSHSVAWT 3029



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 132/351 (37%), Gaps = 81/351 (23%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 3721 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGA 3780

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 3781 HSACVTS--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 3824

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              VA  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 3825 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 3867

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      V  S + GR            S    D G     G G Y + GHGS +   RP
Sbjct: 3868 M-----KVPLSLRVGRPSTPP------PSWPRLDVG-----GKGDYHRLGHGSDDHVRRP 3911

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + EG VY +G N  GQLG G   A   P+L+    L
Sbjct: 3912 RQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 3969

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + ++   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 3970 QGRKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4004



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 4/139 (2%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            PS++ +L  + V Q+A G      ++VEG+VY  G    G+LG G+     VP   +   
Sbjct: 2687 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSG-TVPIPRQVTA 2745

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L S   K V+   G RH+  LT DG+V SWG    G+LG    ++ + P L+  +     
Sbjct: 2746 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRI 2805

Query: 449  RNIACGWWHTLLLAETTQI 467
            R+IACG  H+  L  + ++
Sbjct: 2806 RDIACGSSHSAALTSSGEL 2824



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G    L ++D GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VVKVRCGSQFSVALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P    +L   +V  +AAG  H + ++ +  V+ +G N   Q    + Q 
Sbjct: 690 LGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQHFDTLHQT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P LL  P L++K    ++CG   S
Sbjct: 750 KPEPSLL--PGLDTKHIVGIACGPAQS 774



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 76/191 (39%), Gaps = 52/191 (27%)

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ-- 369
             GWGL G   + +    + P  +  L ++ V QIA      + +S  GRVY    N   
Sbjct: 426 VIGWGLIGWKCYANV---IGPIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT 482

Query: 370 -FGQLGTGVDQAENVPKL------------------------------------LETPIL 392
              QL  G+  + N+ K+                                    LE P +
Sbjct: 483 LAPQLVQGL-ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKV 541

Query: 393 ES--------KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-I 443
            S        K    ++CG+ +SA +T +G++ +WG   YG+LG G S D  IP LV  +
Sbjct: 542 ISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL 601

Query: 444 HGFLPRNIACG 454
            G    ++ACG
Sbjct: 602 KGLKVIDVACG 612



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEALQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 45.1 bits (105), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 3634 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3693

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      R   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 3694 GRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 3753

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P +V  + G    +IA G  H+
Sbjct: 3754 NRSPCDRPRVVESLRGTEVVDIAAGGAHS 3782



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 103/275 (37%), Gaps = 64/275 (23%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VT+ 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQPLAVTDN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G+V++WG            D+G  G    D       +        +K    +VVK R  
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLI--------EKLQDLDVVKVRCG 666

Query: 183 SS--------------AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           S                + +++    G E     P L+    G K+  VAAG  H L L+
Sbjct: 667 SQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALT 726

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           +  +V  WG   + Q    +  +  P P L+P L+
Sbjct: 727 EDSEVHSWGNNDQCQ-HFDTLHQTKPEPSLLPGLD 760



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 3731 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHS 3782

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 3783 ACVTSAGDLYTWG 3795


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 128/272 (47%), Gaps = 30/272 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G +  T  P L+       I ++  G RH+L LSD GQV  WG    GQLG  +  ++V 
Sbjct: 73  GHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQ 132

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P ++           R L+ +              V +IACG  HS  +T  G L ++G
Sbjct: 133 LPKVV-----------RQLVTKT-------------VVQIACGNNHSLALTSCGELYSWG 168

Query: 315 WGLYGQCGHGSTNDQLRPSY---ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
             +YGQ G  S ND    +Y    ++L+ I +  IA G  H+  IS  G V+ +G N  G
Sbjct: 169 SNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCG 228

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG   +   + P  L+T  L +   + V+CG   S  LT +G V + G   YGQLG G 
Sbjct: 229 QLGLNDETNRSYPTQLKT--LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF 286

Query: 432 SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
           S +  +P +V  + G     +ACG  HTL L 
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 108/239 (45%), Gaps = 34/239 (14%)

Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           +++ WG    GQLGLG    + + TP  IP     A                        
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTA------------------------ 41

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+++ACG RH+  +T  G +   G   Y Q GH       RP     L D  + QI  G 
Sbjct: 42  VQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPLLIPELQDYVIIQICCGS 99

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+V  +G N  GQLG   D +   +PK++    L +K    ++CG  HS  
Sbjct: 100 RHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVVQIACGNNHSLA 157

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR---NIP-SLVPIHGFLPRNIACGWWHTLLLAET 464
           LT  G++ SWG N YGQLG+    D    N P  L  + G     IACG  H+ L++++
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 141/348 (40%), Gaps = 57/348 (16%)

Query: 59  GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWA 114
            CG    L  + +GK+   GS D     Y   G    T  P  +P   +  +++   G  
Sbjct: 46  ACGHRHTLFLTATGKVYACGSND-----YSQLGHDLPTKRPLLIPELQDYVIIQICCGSR 100

Query: 115 HCVSVTEAGEVYTWGWREC-----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
           H +++++ G+V +WG  +C           V   KV R   +    Q       S   T 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160

Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
                    G  +  +   +S  + +             P  +T   G+ +  +A GG H
Sbjct: 161 CGELYS--WGSNIYGQLGVNSPNDLTHCNY---------PLRLTTLLGIPLAAIACGGNH 209

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           + ++S  G V+GWG    GQLGL                       +R    +  ++ + 
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDE-------------------TNRSYPTQLKTLRTL 250

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
           G      V+ +ACG   S  +T+ G + T G G YGQ GHG +++++ P     LM   +
Sbjct: 251 G------VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTI 304

Query: 344 EQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            Q+A G  HT+  +   GRVY FG    GQLGT   ++  +P+++  P
Sbjct: 305 TQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 118/313 (37%), Gaps = 56/313 (17%)

Query: 33  PEKSPILSP-----IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
           P K P+L P     +  ++C G             +LA S+ G++++WG  D     + T
Sbjct: 77  PTKRPLLIPELQDYVIIQICCGSR----------HSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 88  SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
             +  + P+        +VV+ A G  H +++T  GE+Y+WG       + +    G   
Sbjct: 127 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG-------SNIYGQLGVNS 179

Query: 148 SFQKDSTGKQSALPTEQAPPSDKRA--GEEVVKRRKTSSA----REESENPASGDEFFTL 201
                       L T    P    A  G       K+ +     R         DE    
Sbjct: 180 PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIP 260
            P  +     + +  VA G   ++ L++ G V+  G G  GQLG G S  +M+P      
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP------ 293

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYG 319
                     R ++   GS           + ++ACG RH+ A+V   G +  FG G  G
Sbjct: 294 ----------RMVMELMGST----------ITQVACGNRHTLALVPSRGRVYAFGLGSSG 333

Query: 320 QCGHGSTNDQLRP 332
           Q G  ST   + P
Sbjct: 334 QLGTRSTKSLMLP 346



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +Y +G    GQLG G  + E +    + P       + V+CG RH+  LT  G+V + G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66

Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           N Y QLG      R  P L+P +  ++   I CG  H+L L++  Q+
Sbjct: 67  NDYSQLGHDLPTKR--PLLIPELQDYVIIQICCGSRHSLALSDWGQV 111


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 166/397 (41%), Gaps = 75/397 (18%)

Query: 5   GSKREENEKMEECKETVVYMWGY----LPGTSPEKSPI-LSPIPARLCGGDSWKDV-CGG 58
           G KR+EN+  +  K   +  WGY     PGTS    PI L P  +      S K+V CGG
Sbjct: 43  GGKRQENKLDDFLKGKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGG 102

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
                L   E G++ T G  + +GQ  L   K G  PE      +  ++  A G +H ++
Sbjct: 103 NHSIFLL--EDGEVYTCG-VNTKGQ--LGHEKEGSKPEQIGALADQHIIHVACGESHSLA 157

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           +++ G +++WG              GS G     +T    A+P        K+  +E++ 
Sbjct: 158 LSDQGRLFSWGA-------------GSDGQLGLTTTEDSVAVPR-----LIKKLNQEMI- 198

Query: 179 RRKTSSAREESENPASGDEFFT------------------LSPCLVTLNPGVKITKVAAG 220
             + S         A+  +FF                    SP  V    G+ + +VAAG
Sbjct: 199 -LQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAG 257

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
           G H+  LS  G V+GWG    GQLGL                      ++ P  V+    
Sbjct: 258 GAHSFALSLSGAVFGWGKNTSGQLGLSDE-----------------QDRESPCHVKLLRT 300

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
                     V  I+CG  H+AV+T  G + TFG G  GQ GH S ND++ P     LM 
Sbjct: 301 QK--------VVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMG 352

Query: 341 IQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTG 376
            +V QIA G  HT+  +   G +Y FG    GQLG+G
Sbjct: 353 SEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSG 389



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD G+++ WG G +GQLGL +    V  P LI              
Sbjct: 145 IIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIK------------- 191

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G    +G   +GQ G G     Q  P
Sbjct: 192 -----------KLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASP 240

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   +Q    P      +L
Sbjct: 241 QRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESP--CHVKLL 298

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG+ H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 299 RTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQI 358

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 359 ACGRQHTL 366



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 5/150 (3%)

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
           +SG      VKE+ACGG HS  + + G + T G    GQ GH       +P    +L D 
Sbjct: 86  TSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGS--KPEQIGALADQ 143

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVV 400
            +  +A G  H++ +S +GR++ +G    GQLG T  + +  VP+L++   L  +    V
Sbjct: 144 HIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKK--LNQEMILQV 201

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           SCG  H   L  DGQ  +WG N +GQLGLG
Sbjct: 202 SCGNWHCLALAADGQFFAWGQNSHGQLGLG 231



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 12/164 (7%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G+  +G  G  ST     L P  +  + +  V+++A G  H++ +  +G VY  G 
Sbjct: 60  MLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGV 119

Query: 368 NQFGQLGTGVD--QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           N  GQLG   +  + E +  L +  I+       V+CG  HS  L++ G++ SWG    G
Sbjct: 120 NTKGQLGHEKEGSKPEQIGALADQHIIH------VACGESHSLALSDQGRLFSWGAGSDG 173

Query: 426 QLGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           QLGL  + D   +P L+  ++  +   ++CG WH L LA   Q 
Sbjct: 174 QLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQF 217


>gi|365877111|ref|ZP_09416617.1| Ig domain-containing protein [Elizabethkingia anophelis Ag1]
 gi|442586957|ref|ZP_21005779.1| Ig domain-containing protein [Elizabethkingia anophelis R26]
 gi|365755385|gb|EHM97318.1| Ig domain-containing protein [Elizabethkingia anophelis Ag1]
 gi|442563364|gb|ELR80577.1| Ig domain-containing protein [Elizabethkingia anophelis R26]
          Length = 658

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 137/285 (48%), Gaps = 42/285 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-------IKMVPTPHLIPCLEHA 265
            I K+A G  H L L++ G+V+  G    GQ+GLG +       +K+      IP ++  
Sbjct: 357 NIKKIALGLTHILFLNNSGEVYVNGSNNYGQIGLGDQWGTNNAYVKLTD----IPTVKDI 412

Query: 266 ASGKDRPLLVR-QGSVNSSGKA---------------------GRSYVKEIACGGRHSAV 303
           A+G    LL+   G V  +GK                        S +K+IA    HS +
Sbjct: 413 AAGDYHSLLLSTSGEVYVAGKNDYGQLGIMDLLNRTNFTKPKFNVSNIKKIAASSEHSIL 472

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           +T++G ++  G+   GQ G G+TN  +    + ++ D  V+ I+   + T+ ++  G VY
Sbjct: 473 LTNSGEVMVAGFNNRGQLGLGNTNASITFQTSKTISD--VKDISTSGYSTLVLTNSGEVY 530

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
             GGN  GQLG G D+ +   +   T I     AK +S G  H+ VLT  G++   GWN 
Sbjct: 531 ATGGNSNGQLGLG-DETD---RTSFTKISTVTNAKNISMGVFHALVLTNSGEIYGCGWNA 586

Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           YG+LG GD  +R   + VP I+     NIA G  H+LL+    +I
Sbjct: 587 YGKLGFGDDTNRTSYTKVPDINNI--ENIAVGKDHSLLINSMGKI 629



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 109/247 (44%), Gaps = 32/247 (12%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV----PTPHLIPCLEHA 265
           P VK   +AAG  H+L+LS  G+V+  G    GQLG+   +       P  ++    + A
Sbjct: 407 PTVK--DIAAGDYHSLLLSTSGEVYVAGKNDYGQLGIMDLLNRTNFTKPKFNVSNIKKIA 464

Query: 266 ASGKDRPLLVRQGSVNSSGKAGR--------------------SYVKEIACGGRHSAVVT 305
           AS +   LL   G V  +G   R                    S VK+I+  G  + V+T
Sbjct: 465 ASSEHSILLTNSGEVMVAGFNNRGQLGLGNTNASITFQTSKTISDVKDISTSGYSTLVLT 524

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
           ++G +   G    GQ G G   D  R S+         + I+ G++H + ++  G +Y  
Sbjct: 525 NSGEVYATGGNSNGQLGLGDETD--RTSFTKISTVTNAKNISMGVFHALVLTNSGEIYGC 582

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G N +G+LG G D      +   T + +    + ++ G  HS ++   G++   G N YG
Sbjct: 583 GWNAYGKLGFGDD----TNRTSYTKVPDINNIENIAVGKDHSLLINSMGKIYGAGSNLYG 638

Query: 426 QLGLGDS 432
           QLGL  S
Sbjct: 639 QLGLDKS 645



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 135/314 (42%), Gaps = 52/314 (16%)

Query: 95  PEPF-PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
           P PF  +   +++ K A G  H + +  +GEVY  G          + ++G  G   +  
Sbjct: 346 PSPFTKIQGISNIKKIALGLTHILFLNNSGEVYVNG----------SNNYGQIGLGDQWG 395

Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN---- 209
           T       T+     D  AG+       TS      E   +G   +     +  LN    
Sbjct: 396 TNNAYVKLTDIPTVKDIAAGDYHSLLLSTS-----GEVYVAGKNDYGQLGIMDLLNRTNF 450

Query: 210 --PGVKIT---KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPC 261
             P   ++   K+AA   H+++L++ G+V   G+   GQLGLG+    I    +  +   
Sbjct: 451 TKPKFNVSNIKKIAASSEHSILLTNSGEVMVAGFNNRGQLGLGNTNASITFQTSKTISDV 510

Query: 262 LEHAASGKDRPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHS 301
            + + SG    +L   G V     NS+G+ G                +  K I+ G  H+
Sbjct: 511 KDISTSGYSTLVLTNSGEVYATGGNSNGQLGLGDETDRTSFTKISTVTNAKNISMGVFHA 570

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI-QVEQIAAGLWHTVCISVEG 360
            V+T++G +   GW  YG+ G G  +D  R SY + + DI  +E IA G  H++ I+  G
Sbjct: 571 LVLTNSGEIYGCGWNAYGKLGFG--DDTNRTSY-TKVPDINNIENIAVGKDHSLLINSMG 627

Query: 361 RVYVFGGNQFGQLG 374
           ++Y  G N +GQLG
Sbjct: 628 KIYGAGSNLYGQLG 641



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 31/136 (22%)

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           ++ E I +    +  I+  G VY+ G GN      T +    N+ K              
Sbjct: 315 LKFETIISAGTRSYAITTSGDVYIAGSGNPGPSPFTKIQGISNIKK-------------- 360

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN--------IPSLVPIHGFLPRNI 451
           ++ G  H   L   G+V   G N YGQ+GLGD    N        IP++        ++I
Sbjct: 361 IALGLTHILFLNNSGEVYVNGSNNYGQIGLGDQWGTNNAYVKLTDIPTV--------KDI 412

Query: 452 ACGWWHTLLLAETTQI 467
           A G +H+LLL+ + ++
Sbjct: 413 AAGDYHSLLLSTSGEV 428


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 472 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 530

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 531 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 570

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 571 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 630

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 631 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 688

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 689 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 721



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 585 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 643

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 644 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 679

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 680 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 739

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 740 KPEPAAL--PGLDTKHIVGIACGPAQS 764



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 649 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 707

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 708 GSTHCLALTEDSEVHSWG 725



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 507 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 563

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 564 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 614

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 615 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 664

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 665 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 724

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 725 GSNDQCQHFDTLRVTK-PEPAALPGLD 750


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 128/272 (47%), Gaps = 30/272 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G +  T  P L+       I ++  G RH+L LSD GQV  WG    GQLG  +  ++V 
Sbjct: 73  GHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQ 132

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P ++           R L+ +              V +IACG  HS  +T  G L ++G
Sbjct: 133 LPKVV-----------RQLVTKT-------------VVQIACGNNHSLALTSCGELYSWG 168

Query: 315 WGLYGQCGHGSTNDQLRPSY---ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
             +YGQ G  S ND    +Y    ++L+ I +  IA G  H+  IS  G V+ +G N  G
Sbjct: 169 SNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCG 228

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG   +   + P  L+T  L +   + V+CG   S  LT +G V + G   YGQLG G 
Sbjct: 229 QLGLNDETNRSYPTQLKT--LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF 286

Query: 432 SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
           S +  +P +V  + G     +ACG  HTL L 
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 108/239 (45%), Gaps = 34/239 (14%)

Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           +++ WG    GQLGLG    + + TP  IP     A                        
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTA------------------------ 41

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+++ACG RH+  +T  G +   G   Y Q GH       RP     L D  + QI  G 
Sbjct: 42  VQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPLLIPELQDYVIIQICCGS 99

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+V  +G N  GQLG   D +   +PK++    L +K    ++CG  HS  
Sbjct: 100 RHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVVQIACGNNHSLA 157

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR---NIP-SLVPIHGFLPRNIACGWWHTLLLAET 464
           LT  G++ SWG N YGQLG+    D    N P  L  + G     IACG  H+ L++++
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 141/348 (40%), Gaps = 57/348 (16%)

Query: 59  GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWA 114
            CG    L  + +GK+   GS D     Y   G    T  P  +P   +  +++   G  
Sbjct: 46  ACGHRHTLFLTATGKVYACGSND-----YSQLGHDLPTKRPLLIPELQDYVIIQICCGSR 100

Query: 115 HCVSVTEAGEVYTWGWREC-----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
           H +++++ G+V +WG  +C           V   KV R   +    Q       S   T 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160

Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
                    G  +  +   +S  + +             P  +T   G+ +  +A GG H
Sbjct: 161 CGELYS--WGSNIYGQLGVNSPNDLTHCNY---------PLRLTTLLGIPLAAIACGGNH 209

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           + ++S  G V+GWG    GQLGL                       +R    +  ++ + 
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDE-------------------TNRSYPTQLKTLRTL 250

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
           G      V+ +ACG   S  +T+ G + T G G YGQ GHG +++++ P     LM   +
Sbjct: 251 G------VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTI 304

Query: 344 EQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            Q+A G  HT+  +   GRVY FG    GQLGT   ++  +P+++  P
Sbjct: 305 TQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 118/313 (37%), Gaps = 56/313 (17%)

Query: 33  PEKSPILSP-----IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
           P K P+L P     +  ++C G             +LA S+ G++++WG  D     + T
Sbjct: 77  PTKRPLLIPELQDYVIIQICCGSR----------HSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 88  SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
             +  + P+        +VV+ A G  H +++T  GE+Y+WG       + +    G   
Sbjct: 127 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG-------SNIYGQLGVNS 179

Query: 148 SFQKDSTGKQSALPTEQAPPSDKRA--GEEVVKRRKTSSA----REESENPASGDEFFTL 201
                       L T    P    A  G       K+ +     R         DE    
Sbjct: 180 PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIP 260
            P  +     + +  VA G   ++ L++ G V+  G G  GQLG G S  +M+P      
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP------ 293

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYG 319
                     R ++   GS           + ++ACG RH+ A+V   G +  FG G  G
Sbjct: 294 ----------RMVMELMGST----------ITQVACGNRHTLALVPSRGRVYAFGLGSSG 333

Query: 320 QCGHGSTNDQLRP 332
           Q G  ST   + P
Sbjct: 334 QLGTRSTKSLMLP 346



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +Y +G    GQLG G  + E +    + P       + V+CG RH+  LT  G+V + G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66

Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           N Y QLG      R  P L+P +  ++   I CG  H+L L++  Q+
Sbjct: 67  NDYSQLGHDLPTKR--PLLIPELQDYVIIQICCGSRHSLALSDWGQV 111


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
           boliviensis]
          Length = 4472

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 131/273 (47%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  +       
Sbjct: 170 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV------- 222

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
                         PL   +     SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 223 --------------PLEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 268

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 269 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 328

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 329 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 386

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 387 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 419



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 2685 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 2727

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 2728 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 2779

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  NV      
Sbjct: 2780 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIER 2839

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 2840 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 2897

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 2898 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 2957

Query: 457  HTL 459
            H++
Sbjct: 2958 HSV 2960



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 136/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            SP L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG GSR      +++ 
Sbjct: 3665 SPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIE 3724

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 3725 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3784

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P+   SL  + V ++  G 
Sbjct: 3785 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGS 3844

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 3845 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 3902

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 3903 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3952



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 132/321 (41%), Gaps = 69/321 (21%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG  E                      G  S  P ++  
Sbjct: 3680 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGSRSPCDRPR 3721

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
              +   G EVV     ++    S    +  + +T                 L P LV   
Sbjct: 3722 VIESLRGIEVVD---VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL 3778

Query: 210  PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAA 266
             G ++  +A  +G   TL L+D   VW WG G  G+LG G S    VPT           
Sbjct: 3779 QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPT----------- 3827

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
                         ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS 
Sbjct: 3828 ------------KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 3872

Query: 327  NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
            +   RP     L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L
Sbjct: 3873 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 3932

Query: 387  LETPILESKRAKVVSCGARHS 407
            +    L+ K+   V+CG+ H+
Sbjct: 3933 VAA--LQGKKVNRVACGSAHT 3951



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 3641

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 3642 GKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3701

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHGS +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 3702 GEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3761

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 3762 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3819

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P+ +  + G     + CG   ++ L ++
Sbjct: 3820 SDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKS 3853



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 29/219 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L P +V +  G ++ +VA G R   TL L+D G V+ WG G  G+LG G     
Sbjct: 2772 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG----- 2826

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G + P  + +  +N  G      V +I CG + S  +T +G + T
Sbjct: 2827 ------------GSEGCNVPQNIER--LNGQG------VCQIECGAQFSLALTKSGVVWT 2866

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHGS     +P     L   ++  +A G  H + ++  G+VY +G N  GQ
Sbjct: 2867 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 2926

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
             G G       P L++   LE ++   V+CG+ HS   T
Sbjct: 2927 QGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAWT 2963



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 37/262 (14%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASG 268
            G  I K AAG   T  +    +V+ WG   + QLG   GS+IK       +P      S 
Sbjct: 2579 GSLIRKKAAGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSA 2629

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             +                    V ++A G +    VT  G +   G    G+ G G ++ 
Sbjct: 2630 LN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSG 2669

Query: 329  QL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
             +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + P+
Sbjct: 2670 TVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 2729

Query: 386  LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-H 444
            L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +  
Sbjct: 2730 LIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 2787

Query: 445  GFLPRNIACGWWHTLLLAETTQ 466
            G     +ACG      LA T +
Sbjct: 2788 GHRVIQVACGSRDAQTLALTDE 2809



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 283 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 341

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 342 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 377

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 378 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 437

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 438 KPEPAAL--PGLDTKHIVGIACGPAQS 462



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 3843 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3901

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 3902 CTEDGEVYTWG 3912



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 347 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 405

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 406 GSTHCLALTEDSEVHSWG 423



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    I A   G  + K V    CG  ++ A +  G+L
Sbjct: 205 VYSWGCGDGGRLGHGDTVPLEEP--KAISA-FSGKQAGKHVVHIACGSTYSAAITAEGEL 261

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 262 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 312

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 313 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 362

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 363 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 422

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 423 GSNDQCQHFDTLRVTK-PEPAALPGLD 448



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 3690 LALSSEGEVYSWGEAED--------GKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHS 3741

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 3742 ACVTAAGDLYTWG 3754


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 34/242 (14%)

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            H++ L++ G+V+ WG G  G+LG G+                     DR     QG    
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGN--------------------SDRQRRPXQGE--- 4128

Query: 283  SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                    V +++CG +HSAVVT  G L TFG G YG+ G G+T+++  P   ++L   Q
Sbjct: 4129 -------EVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQ 4181

Query: 343  VEQIAAGLWHTVCISVEG-RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            + Q+A GL HT+ +S +G  V+ FG   +G+LG G   A++ P+ ++  +L     K V+
Sbjct: 4182 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKID--VLCGIGIKKVA 4239

Query: 402  CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLL 460
            CG + S  LT+DG V ++G ++   L  G + + N P  +P+  G +  ++A G  HTL 
Sbjct: 4240 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLA 4299

Query: 461  LA 462
            LA
Sbjct: 4300 LA 4301



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 36/243 (14%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           I+S+  +V+ WG     QL  G++ K++  P L P    A +                  
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKIL-QPKLAPSFSDAQT------------------ 407

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-----LRPSYASSLMD 340
                   I  G   + V++  G++   G G YG+ G G +N+Q     L      S+  
Sbjct: 408 --------IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           +   + + G  HT+  + EG V+ +G   +G+LG G    +  PKL++ P L+ K    V
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCV 516

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           S G RHSA +TEDG++ +WG   +G+LG GDS  RNIP+LV     +   ++CG  HT+ 
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIA 575

Query: 461 LAE 463
           L++
Sbjct: 576 LSK 578



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 39/231 (16%)

Query: 233  VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
            V+ WG G  GQL    R  MVP                            +     S  +
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP----------------------------AAAPSFSQAQ 4029

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL-- 350
            ++ CG   + V+   G +L  G G YG+ G G+++D    +  S+L    V Q+      
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089

Query: 351  -WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
              H++ ++  G V+ +G   +G+LG G    +  P        + +    +SCG +HSAV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX-------QGEEVVQMSCGFKHSAV 4142

Query: 410  LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            +T DG++ ++G   YG+LGLG++ ++ +P  V  + G+    +ACG  HTL
Sbjct: 4143 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4193



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 32/219 (14%)

Query: 206 VTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           +T  P   I KV++      HTL  +  G+V+ WG G  G+LG G+              
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGN-------------- 494

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
              +S +  P L+ QG +   GK     V  ++ G RHSA VT+ G L T+G G +G+ G
Sbjct: 495 ---SSTQKYPKLI-QGPLQ--GKV----VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAE 381
           HG +N +  P+    + +  V +++ G  HT+ +S +GR V+ FGG   G+LG G     
Sbjct: 545 HGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
             PK++E   L+    + V  G++ S  LT  GQV +WG
Sbjct: 603 YKPKVIEA--LQGMFIRKVCAGSQSSLALTSTGQVYAWG 639



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +  V+AG RH+  +++ G+++ WG G  G+LG G                  ++ ++
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD-----------------SNSRN 552

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            P LV+            S V E++CG  H+ A+  D   + +FG G  G+ GHG TN  
Sbjct: 553 IPTLVKD----------ISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLE 388
            +P    +L  + + ++ AG   ++ ++  G+VY +G      LG G  +A  + PKL+E
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE 660

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
              L + R   VS G  H   L+ D +V +WG N  GQ G G+S
Sbjct: 661 E--LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 153/397 (38%), Gaps = 80/397 (20%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
            P  +P  S     +CG +    +   G   A      G+L   G++DD     + S   G
Sbjct: 4019 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4077

Query: 93   ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
                 F +     +V +     H +++TE+GEV++WG            D+G  G    D
Sbjct: 4078 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4119

Query: 153  STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
                       Q  P     GEEVV   + S   + S    S  + FT            
Sbjct: 4120 ----------RQRRPXQ---GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4163

Query: 203  -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVP 254
                   P  VT   G +I +VA G  HTL +S D   VW +G G  G+LGLG+      
Sbjct: 4164 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN------ 4217

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       ++ K  P       ++     G   +K++ACG + S  +T  G + TFG
Sbjct: 4218 -----------STAKSSP-----QKIDVLCGIG---IKKVACGTQFSVALTKDGHVYTFG 4258

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
                     G   +  RP     L  + +E +A G  HT+ ++  G VY +G N  GQLG
Sbjct: 4259 QDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLG 4318

Query: 375  TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
             G       P L+    L+ K  + +S G  HSA  T
Sbjct: 4319 LGHTNHVREPTLVTG--LQGKNVRQISAGRCHSAAWT 4353



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 125/314 (39%), Gaps = 64/314 (20%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
           G  G  LA +  G++ +WG  D     Y   G    + + +P     P +  VV   +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           + H  +VTE GE+YTWG            DFG  G    DS  +   +PT     S+   
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563

Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
           GE       T +  ++     S           GD      P ++    G+ I KV AG 
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
           + +L L+  GQV+ WG G    LG GS       P LI   E  A+ +            
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI---EELAATR------------ 666

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMD 340
                    + +++ G  H   ++    +  +G    GQCG G ST    +P   S L  
Sbjct: 667 ---------IVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDG 717

Query: 341 IQVEQIAAGLWHTV 354
           I ++QI+AG  H++
Sbjct: 718 IAIQQISAGTSHSL 731



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 362  VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
            VY++G  + GQL    +   NV      P     +A+ V CG   + V+  +G VL+ G 
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 422  NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI--ACGW-WHTLLLAETTQI 467
              YG+LG G+S D ++ +++  + GF+   +  +CG   H++ L E+ ++
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4102


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 140/274 (51%), Gaps = 24/274 (8%)

Query: 198 FFTLSPCLV-TLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           F  L  CLV  +N  +K + +VA   RHT  +   G+++ WG    G+LG G + ++  +
Sbjct: 76  FGNLEDCLVPRVNLSLKNVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHG-QFELSIS 134

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
            +++           +P+ V+          G   + +++CG  H+  +TD    LT+G 
Sbjct: 135 NNVVS----------QPMKVK-------ALEGEKVI-QVSCGSYHTGCLTDDKKALTWGL 176

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           GL G+ GHG T D   P    SL  + +++I+ G  HT  + V G++Y+FGG  FG+LG 
Sbjct: 177 GLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGF 236

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW-NKYGQLGLGDSID 434
           G      +P+LLE P LE  +   VS G++HSA +T+ G+V +WG   + G +  G   D
Sbjct: 237 GSTDDVLIPRLLEGP-LEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHD 295

Query: 435 RNIPS-LVPIHGFLPRNIACGWWHTLLLAETTQI 467
              P  L  +      +I+CG  H++ L++   I
Sbjct: 296 FLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDI 329



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 179/423 (42%), Gaps = 78/423 (18%)

Query: 67  SESGKLITWGSADDEGQSYLTSGKHGETPEPFP-----LPTEASVVKAAAGWAHCVSVTE 121
           S+SG ++ WGS +     Y   G  GE   P P     L   +S+ K + G  +  ++T 
Sbjct: 6   SKSG-VVVWGSTE-----YGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITN 59

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
           +G++  WG+  C          G  G       G        +   S K   +     R 
Sbjct: 60  SGDLILWGYGGC----------GQLG------FGNLEDCLVPRVNLSLKNVIQVACSDRH 103

Query: 182 TSSAREE--------SENPASGDEFFTLS--------PCLVTLNPGVKITKVAAGGRHTL 225
           T++            S+N   G   F LS        P  V    G K+ +V+ G  HT 
Sbjct: 104 TAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTG 163

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            L+D  +   WG G +G+LG G   + + TP LI  L                       
Sbjct: 164 CLTDDKKALTWGLGLQGRLGHGD-TQDIFTPKLIESL----------------------- 199

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVE 344
           AG   +KEI+CGG H+A++   G L  FG G +G+ G GST+D L P      L DIQ+ 
Sbjct: 200 AGLP-IKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQIT 258

Query: 345 QIAAGLWHTVCISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           +++ G  H+  ++  G+VY +G G + G +  G +     PK L    LE      +SCG
Sbjct: 259 KVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSN--LEKAFIVDISCG 316

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLL 460
             HS  L++ G + +WG  K    G+   I  N+PS  PI     +NI    C   H++ 
Sbjct: 317 NSHSVALSDVGDIYTWGMTKNIGHGI-QGIHPNMPSKHPI--LQNKNIVQVVCSSSHSIA 373

Query: 461 LAE 463
           L++
Sbjct: 374 LSD 376



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 35/241 (14%)

Query: 233 VWGWG-YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           VWG   YG  G  G     ++ P PHL+  L H +S                       +
Sbjct: 12  VWGSTEYGQHGSKGE----EVSPGPHLVDGLRHLSS-----------------------I 44

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
            +++CG  +SA +T++G L+ +G+G  GQ G G+  D L P    SL +  V Q+A    
Sbjct: 45  SKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLKN--VIQVACSDR 102

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI----LESKRAKVVSCGARHS 407
           HT  I   G +Y +G ++ G+LG G  +      ++  P+    LE ++   VSCG+ H+
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTLLLAETTQ 466
             LT+D + L+WG    G+LG GD+ D   P L+     LP + I+CG  HT +L  T +
Sbjct: 163 GCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGK 222

Query: 467 I 467
           +
Sbjct: 223 L 223



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 171/413 (41%), Gaps = 58/413 (14%)

Query: 22  VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V +WG    G    K   +SP P  + G      +    CG  ++ A + SG LI WG  
Sbjct: 10  VVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
              G   L  G   +   P    +  +V++ A    H  ++   GE+YTWG   C  + K
Sbjct: 70  ---GCGQLGFGNLEDCLVPRVNLSLKNVIQVACSDRHTAAILSNGELYTWG---CSKNGK 123

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-------- 190
           +       G F+   +    + P +      ++  +       T    ++ +        
Sbjct: 124 LGH-----GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGL 178

Query: 191 --NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
                 GD     +P L+    G+ I +++ GG HT IL   G+++ +G G  G+LG GS
Sbjct: 179 QGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238

Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
              +     LIP L         PL   Q             + +++ G +HSA VT  G
Sbjct: 239 TDDV-----LIPRLLEG------PLEDIQ-------------ITKVSLGSQHSAAVTKCG 274

Query: 309 ALLTFGWGLYGQCGH---GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
            + T  WG  G+ GH   G  +D L P   S+L    +  I+ G  H+V +S  G +Y +
Sbjct: 275 KVYT--WGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTW 332

Query: 366 GGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           G  +   +G G+     N+P   + PIL++K    V C + HS  L++ G ++
Sbjct: 333 GMTK--NIGHGIQGIHPNMPS--KHPILQNKNIVQVVCSSSHSIALSDIGALV 381


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 29/242 (11%)

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            H++ L++ G+V+ WG G  G+LG G+  +                 + R +   QG    
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDR---------------QRRPRQIEALQGE--- 4133

Query: 283  SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                    V +++CG +HSAVVT  G L TFG G YG+ G G+T+++  P   ++L   Q
Sbjct: 4134 -------EVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQ 4186

Query: 343  VEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            + Q+A GL HT+ +S +G  V+ FG   +G+LG G   A++ P+ ++  +L     K V+
Sbjct: 4187 IGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVD--VLCGIGIKKVA 4244

Query: 402  CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLL 460
            CG + S  LT+DG V ++G ++   L  G + + N P  +P+  G +  ++A G  HTL 
Sbjct: 4245 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLA 4304

Query: 461  LA 462
            LA
Sbjct: 4305 LA 4306



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 34/231 (14%)

Query: 233  VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
            V+ WG G  GQL    R  MVP                            +     S  +
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP----------------------------AAAPSFSQAQ 4029

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL-- 350
            ++ CG   + V+   G +L  G G YG+ G G+++D    +  S+L    V Q+      
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089

Query: 351  -WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
              H++ ++  G V+ +G   +G+LG G    +  P+ +E   L+ +    +SCG +HSAV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFKHSAV 4147

Query: 410  LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            +T DG++ ++G   YG+LGLG++ ++ +P  V  + G+    +ACG  HTL
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4198



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 36/243 (14%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           I+S+  +V+ WG     QL  G++ K++  P L P    A +                  
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKIL-QPKLAPSFSDAQT------------------ 407

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-----LRPSYASSLMD 340
                   I  G   + V++  G++   G G YG+ G G +N+Q     L      S+  
Sbjct: 408 --------IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           +   + + G  HT+  + EG V+ +G   +G+LG G    +  PKL++ P L+ K    V
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCV 516

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           S G RHSA +TEDG++ +WG   +G+LG GDS  RNIP+LV     +   ++CG  HT+ 
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIA 575

Query: 461 LAE 463
           L++
Sbjct: 576 LSK 578



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 26/250 (10%)

Query: 216  KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            +V  G   T ++   G V   G G  G+LG G+   +    H++  +  A  G      V
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL----HVLTVIS-ALQG-----FV 4079

Query: 276  RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                V S G  G            HS  +T++G + ++G G YG+ GHG+++ Q RP   
Sbjct: 4080 VTQLVTSCGSDG------------HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI 4127

Query: 336  SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
             +L   +V Q++ G  H+  ++ +G+++ FG   +G+LG G    + +P+      LE  
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE--RVTALEGY 4185

Query: 396  RAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIAC 453
            +   V+CG  H+  ++ DG V+ ++G   YG+LGLG+S  ++ P  V +  G   + +AC
Sbjct: 4186 QIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4245

Query: 454  GWWHTLLLAE 463
            G   ++ L +
Sbjct: 4246 GTQFSVALTK 4255



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 32/219 (14%)

Query: 206 VTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           +T  P   I KV++      HTL  +  G+V+ WG G  G+LG G+              
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGN-------------- 494

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
              +S +  P L+ QG +   GK     V  ++ G RHSA VT+ G L T+G G +G+ G
Sbjct: 495 ---SSTQKYPKLI-QGPLQ--GKV----VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAE 381
           HG +N +  P+    + +  V +++ G  HT+ +S +GR V+ FGG   G+LG G     
Sbjct: 545 HGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
             PK++E   L+    + V  G++ S  LT  GQV +WG
Sbjct: 603 YKPKVIEA--LQGMFIRKVCAGSQSSLALTSTGQVYAWG 639



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +  V+AG RH+  +++ G+++ WG G  G+LG G                  ++ ++
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD-----------------SNSRN 552

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            P LV+            S V E++CG  H+ A+  D   + +FG G  G+ GHG TN  
Sbjct: 553 IPTLVKD----------ISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLE 388
            +P    +L  + + ++ AG   ++ ++  G+VY +G      LG G  +A  + PKL+E
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE 660

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
              L + R   VS G  H   L+ D +V +WG N  GQ G G+S
Sbjct: 661 E--LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 154/397 (38%), Gaps = 75/397 (18%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
            P  +P  S     +CG +    +   G   A      G+L   G++DD     + S   G
Sbjct: 4019 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4077

Query: 93   ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
                 F +     +V +     H +++TE+GEV++WG            D+G  G    D
Sbjct: 4078 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4119

Query: 153  STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
               +   +   Q        GEEVV   + S   + S    S  + FT            
Sbjct: 4120 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4168

Query: 203  -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVP 254
                   P  VT   G +I +VA G  HTL +S D   VW +G G  G+LGLG+      
Sbjct: 4169 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN------ 4222

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       ++ K  P       V+     G   +K++ACG + S  +T  G + TFG
Sbjct: 4223 -----------STAKSSP-----QKVDVLCGIG---IKKVACGTQFSVALTKDGHVYTFG 4263

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
                     G   +  RP     L  + +E +A G  HT+ ++  G VY +G N  GQLG
Sbjct: 4264 QDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLG 4323

Query: 375  TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
             G       P L+    L+ K  + +S G  HSA  T
Sbjct: 4324 LGHTNHVREPTLVTG--LQGKNVRQISAGRCHSAAWT 4358



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 125/314 (39%), Gaps = 64/314 (20%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
           G  G  LA +  G++ +WG  D     Y   G    + + +P     P +  VV   +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           + H  +VTE GE+YTWG            DFG  G    DS  +   +PT     S+   
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563

Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
           GE       T +  ++     S           GD      P ++    G+ I KV AG 
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
           + +L L+  GQV+ WG G    LG GS       P LI   E  A+ +            
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI---EELAATR------------ 666

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMD 340
                    + +++ G  H   ++    +  +G    GQCG G ST    +P   S L  
Sbjct: 667 ---------IVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDG 717

Query: 341 IQVEQIAAGLWHTV 354
           I ++QI+AG  H++
Sbjct: 718 IAIQQISAGTSHSL 731



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 362  VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
            VY++G  + GQL    +   NV      P     +A+ V CG   + V+  +G VL+ G 
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 422  NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI--ACGW-WHTLLLAETTQI 467
              YG+LG G+S D ++ +++  + GF+   +  +CG   H++ L E+ ++
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4102


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 472 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 530

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 531 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 570

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 571 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 630

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 631 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 688

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 689 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 721



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 585 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 643

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 644 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 679

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 680 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 739

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 740 KPEPAAL--PGLDTKHIVGIACGPAQS 764



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 649 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 707

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 708 GSTHCLALTEDSEVHSWG 725



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 507 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 563

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 564 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 614

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 615 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 664

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 665 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 724

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 725 GSNDQCQHFDTLRVTK-PEPAALPGLD 750


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  117 bits (293), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 93/316 (29%), Positives = 145/316 (45%), Gaps = 46/316 (14%)

Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
           S N    D++FT       L P  +I  V AG  H  ++S  G+++ WG G  G+LG G 
Sbjct: 112 SNNNNDDDKYFT------KLYPEERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGD 165

Query: 249 RIKMVPTPHLIPCLEHA------ASGKDRPLLVRQGSV-------NSSGKAGRSYVKE-- 293
             + + TP  +  L +         G+    L             N  G+ GR    +  
Sbjct: 166 E-ESISTPKQVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDF 224

Query: 294 -----------------IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                            +  G   +AV+  +GAL T+G G +G+ GHG T ++ +P+  S
Sbjct: 225 TCLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVS 284

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESK 395
           SL    V  +A G  H++ ++  G ++ +G  + GQLG G  Q++ + PK L+   ++  
Sbjct: 285 SLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQF-FVDMP 343

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR--NIPS--LVPIHGFLPRNI 451
           +   +S G  HS    +DG V +WG + YG LG GDS D   NIP   L+P  G   + I
Sbjct: 344 KIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMP-RGIRFKTI 402

Query: 452 ACGWWHTLLLAETTQI 467
           +CG+ HT+ L     I
Sbjct: 403 SCGFQHTVALTSDNTI 418



 Score =  110 bits (275), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 161/379 (42%), Gaps = 51/379 (13%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           E  ++   AG AH   ++++G+++TWG  +          +G  G   ++S      +  
Sbjct: 128 EERIILVNAGAAHIAMISQSGKLFTWGEGQ----------YGRLGHGDEESISTPKQVVA 177

Query: 163 EQAPPSDKR--AGEEVVKRRKTSSA------REESENPASGD--EFFTLSPCLVTLNPGV 212
               P       G   +    T+ +        E      GD  + FT  P  V +    
Sbjct: 178 LANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAK 237

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           ++  + AG     ++   G ++ WG G  G+LG G                     + +P
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGD-----------------TENRYQP 280

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLR 331
            LV       S   G   V  +A GG HS  +T AG L ++G G  GQ GHGS  + QL 
Sbjct: 281 TLV-------SSLYGHVVVA-VALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLA 332

Query: 332 PSYASSLMDI-QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV--DQAENVPKLLE 388
           P      +D+ ++  I+AG +H+V    +G VY +G + +G LGTG   D A N+P+ + 
Sbjct: 333 PKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRIL 392

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
            P     R K +SCG +H+  LT D  + SWG    G+LG  +  ++  P    I  + P
Sbjct: 393 MP--RGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQCAPIACNIPNYQP 450

Query: 449 RNIACGWWHTLLLAETTQI 467
              + G   T+++ +   +
Sbjct: 451 VVFSAGEISTIVIGKKNTV 469



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 98/373 (26%), Positives = 145/373 (38%), Gaps = 67/373 (17%)

Query: 67  SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-ASVVKAAAGWAHC-------VS 118
           S+SGKL TWG    EGQ Y   G HG+  E    P +  ++      +  C       +S
Sbjct: 145 SQSGKLFTWG----EGQ-YGRLG-HGDE-ESISTPKQVVALANIPMKYVFCGGRSTIALS 197

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR-----AG 173
            T    +YTWG            +FG  G  + D     + LP   A P  KR     AG
Sbjct: 198 HTAGSGLYTWG----------NNEFGQLG--RGDCGDDFTCLPESVAVPGAKRLVALDAG 245

Query: 174 EEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
                   +S A     R +      GD      P LV+   G  +  VA GG H+L L+
Sbjct: 246 ASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALT 305

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
             G+++ WG G  GQLG GS       P  +          D P ++             
Sbjct: 306 KAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFF------VDMPKII------------- 346

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM--DIQVEQI 346
                I+ GG HS    D G++  +G   YG  G G ++D         LM   I+ + I
Sbjct: 347 ----GISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTI 402

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP-----ILESKRAKVVS 401
           + G  HTV ++ +  +Y +G    G+LGT  ++ +  P     P     +  +     + 
Sbjct: 403 SCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQCAPIACNIPNYQPVVFSAGEISTIV 462

Query: 402 CGARHSAVLTEDG 414
            G +++ V T  G
Sbjct: 463 IGKKNTVVATSSG 475



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 73/313 (23%), Positives = 111/313 (35%), Gaps = 95/313 (30%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEAS------VVKA 109
            G   A     SG L TWG  D         G+  HG+T   +  PT  S      VV  
Sbjct: 244 AGASRAAVIDSSGALFTWGRGD--------HGRLGHGDTENRYQ-PTLVSSLYGHVVVAV 294

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           A G  H +++T+AGE+++WG              G  G     S   Q   P +      
Sbjct: 295 ALGGGHSLALTKAGELFSWGR-------------GENGQLGHGSYQSQQLAPKQL----- 336

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
                                      +FF   P         KI  ++AGG H++   D
Sbjct: 337 ---------------------------QFFVDMP---------KIIGISAGGYHSVAQLD 360

Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            G V+ WG    G LG G               +  A    + +L+ +G           
Sbjct: 361 DGSVYAWGMSDYGILGTGDS-------------DDGAINIPQRILMPRG----------I 397

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
             K I+CG +H+  +T    + ++G GL G+ G  +  +Q  P  A ++ + Q    +AG
Sbjct: 398 RFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQCAP-IACNIPNYQPVVFSAG 456

Query: 350 LWHTVCISVEGRV 362
              T+ I  +  V
Sbjct: 457 EISTIVIGKKNTV 469


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 28/272 (10%)

Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P +
Sbjct: 483 LAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 541

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I                       SGK    +V  IACG  +SA +T  G L T+G G Y
Sbjct: 542 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G+ GHGS+ D++ P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG G
Sbjct: 582 GRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G      
Sbjct: 642 GSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 437 IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P L+  + G    ++A G  H L L E +++
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 132/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----- 265
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L        
Sbjct: 2993 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKV 3052

Query: 266  ---ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 3053 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3112

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 3113 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3172

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3173 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3230

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + +  Q+
Sbjct: 3231 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQV 3280



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3049 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3091

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3092 PRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLK 3143

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3144 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3203

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3204 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3261

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3262 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3321

Query: 457  HTL 459
            H++
Sbjct: 3322 HSV 3324



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      ++V 
Sbjct: 4031 TPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVE 4090

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4091 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4150

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4151 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4210

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4211 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4268

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4269 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 131/315 (41%), Gaps = 57/315 (18%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGA 4105

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4106 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4149

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4150 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4192

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4193 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4244

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4245 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4302

Query: 393  ESKRAKVVSCGARHS 407
            + K+   V+CG+ H+
Sbjct: 4303 QGKKVNRVACGSAHT 4317



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 3000 AGGSKSLFAVTVEGKVYACGEATNGRLGLGLSS--GTVPIPRQITALSSYVVKKVAVHSG 3057

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3058 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3107

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3108 CGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3167

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3168 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3208

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3209 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3262

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3263 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3320

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3321 SHSVAWT 3327



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C   AA    RP+ +  G     +V + 
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----CEALAAL---RPVQLIGGEQTLFAVTAD 4007

Query: 284  GK----------------------------AGRSYVKEIAC--GGRHSAVVTDAGALLTF 313
            GK                                ++K++A   GG+H   ++  G + ++
Sbjct: 4008 GKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4067

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4068 GEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4127

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4128 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4186 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4219



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2962 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2995

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G +   G    G+ G G ++  +  P   ++L    V+++A 
Sbjct: 2996 -VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3054

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3055 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3112

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA +T  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3113 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3172

Query: 466  Q 466
            +
Sbjct: 3173 E 3173



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 130/328 (39%), Gaps = 73/328 (22%)

Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           +++K AA     H +++   GEVY+WG              G  G       G    +P 
Sbjct: 495 NIIKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536

Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
           E+    +  S K+AG+ VV      T SA   +E               + +S DE    
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVI-- 594

Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI
Sbjct: 595 -PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             L+                           V ++ CG + S  +T  G + ++G G   
Sbjct: 653 EKLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQ 688

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +  
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRV 748

Query: 380 AENVPKLLETPILESKRAKVVSCGARHS 407
            +  P  L  P L++K    ++CG   S
Sbjct: 749 TKPEPSAL--PGLDTKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4209 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4267

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4268 CTEDGEVYTWG 4278



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)

Query: 42  IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
           IP  + G    K +   CG G    LA +E+G++ +WG  D     Y   G+ G    +T
Sbjct: 594 IPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648

Query: 95  PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           P+      +  VVK   G    +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 4045 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVVESLRGIE 4096

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   VT AG++YTWG
Sbjct: 4097 VVDVAAGGAHSACVTAAGDLYTWG 4120


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 102/275 (37%), Gaps = 64/275 (23%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G+V++WG            D+G  G    D       +        +K    +VVK R  
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLI--------EKLQDLDVVKVRCG 665

Query: 183 SS--------------AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           S                + +++    G E     P L+    G K+  VAAG  H L L+
Sbjct: 666 SQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           +  +V  WG   + Q     R+   P P  +P L+
Sbjct: 726 EDSEVHSWGSNDQCQHFDTLRVTK-PEPAALPGLD 759


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 28/272 (10%)

Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 541

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I                       SGK    +V  IACG  +SA +T  G L T+G G Y
Sbjct: 542 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G      
Sbjct: 642 GSDGCKTPKLIEK--LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 437 IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P L+  + G    ++A G  H L+L E +++
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEV 731



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----- 265
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L        
Sbjct: 2992 ALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKV 3051

Query: 266  ---ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IA G  H
Sbjct: 3052 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSH 3111

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 3112 SAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3229

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + ++ Q+
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L++      + K  R  +++IA G  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3091 PRLIQ------ALKTKR--IRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLK 3142

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3203 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3260

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3261 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 457  HTL 459
            H++
Sbjct: 3321 HSV 3323



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4266

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4267 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4103

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4104 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4147

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4148 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4190

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4191 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4242

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4243 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4300

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4301 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4335



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+ + G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEA--------TNGRLGLGMSSGTVPIPRQITALSSYVVKK 3050

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H  ++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3051 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIQALKTK 3100

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3101 RIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3161 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3202

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHGS     +P     L
Sbjct: 3203 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3255

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3256 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3313

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3314 RVACGSSHSVAWT 3326



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4005

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4006 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4065

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4066 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4126 GHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2994

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G + + G    G+ G G ++  +  P   ++L    V+++A 
Sbjct: 2995 -VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L++   L++KR + ++ G+ H
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQA--LKTKRIRDIAYGSSH 3111

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA LT  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3112 SAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 466  Q 466
            +
Sbjct: 3172 E 3172



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 87/211 (41%), Gaps = 37/211 (17%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN----QFGQLGTG 376
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N     F  LG  
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGV- 748

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHS 407
                  P+    P L+SK    ++CG   S
Sbjct: 749 -----TKPEPTAFPGLDSKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 47/247 (19%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L+L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSW 734

Query: 237 GYGGEGQ 243
           G   + Q
Sbjct: 735 GSNDQCQ 741



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4054 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4106 ACVTAAGDLYTWG 4118


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 97/176 (55%), Gaps = 4/176 (2%)

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           K +ACG  H+A+VT++G L TFG   +GQ G        RP     L   +V+ +A G  
Sbjct: 39  KSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRI 98

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           HT+  +  G +Y FG N  GQLG     + N P  +E    E ++ K ++ GA HS  LT
Sbjct: 99  HTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVE---CEPRQYKALAAGADHSVALT 155

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           +DG++  WG    GQLGLGD  D++ P+L+     +  ++ACG++HT  + +  ++
Sbjct: 156 DDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDNKV-ISVACGYYHTAFVTDVGEV 210



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 173/421 (41%), Gaps = 101/421 (23%)

Query: 49  GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
           GD  K V  G    AL T ESG+L T+G  +D GQ  +   K    P          V  
Sbjct: 35  GDKAKSVACGDEHTALVT-ESGRLFTFG-VNDWGQLGIDEVKVSTRPCCVKKLKPEKVKV 92

Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
            A G  H +  TE+G +YT               FG+ G  Q         L  E  P S
Sbjct: 93  VACGRIHTIVATESGCLYT---------------FGANGDGQ---------LGVEDIPSS 128

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           +                                 P  V   P  +   +AAG  H++ L+
Sbjct: 129 N--------------------------------CPVKVECEP-RQYKALAAGADHSVALT 155

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
           D G+++ WG G EGQLGLG  I    TP L+                          +  
Sbjct: 156 DDGELYVWGGGSEGQLGLGD-IDDKSTPTLL--------------------------STD 188

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI--QVEQI 346
           + V  +ACG  H+A VTD G + TFG G  G+ G G+   +   + A   ++I  + + +
Sbjct: 189 NKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGK---AVAPKKVNIPEKAKSV 245

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGA 404
           A G  HTV ++  G+VY FG    GQLG      +N     ETP+  + + KV  ++ G 
Sbjct: 246 ACGGSHTVVLTECGKVYTFGEGGNGQLG-----HKNKYFYCETPVWLNFKHKVTQIAAGE 300

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN--IPSLVP-IHGFLPRNIACGWWHTLLL 461
            H+A++TE GQ+ ++G  ++ +LGL      N   P        F+   ++CG  H ++L
Sbjct: 301 NHTALVTEKGQLYTFGDGRHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCGGCHMIVL 360

Query: 462 A 462
           A
Sbjct: 361 A 361



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 125/269 (46%), Gaps = 39/269 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           PC V      K+  VA G  HT++ ++ G ++ +G  G+GQLG+   I     P  + C 
Sbjct: 79  PCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGV-EDIPSSNCPVKVEC- 136

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                    R Y K +A G  HS  +TD G L  +G G  GQ G
Sbjct: 137 -----------------------EPRQY-KALAAGADHSVALTDDGELYVWGGGSEGQLG 172

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            G  +D+  P+  S+  D +V  +A G +HT  ++  G V+ FG    G+LG G D  + 
Sbjct: 173 LGDIDDKSTPTLLST--DNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKA 230

Query: 383 V-PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           V PK +  P    ++AK V+CG  H+ VLTE G+V ++G    GQLG     ++      
Sbjct: 231 VAPKKVNIP----EKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLG---HKNKYFYCET 283

Query: 442 PI-HGFLPR--NIACGWWHTLLLAETTQI 467
           P+   F  +   IA G  HT L+ E  Q+
Sbjct: 284 PVWLNFKHKVTQIAAGENHTALVTEKGQL 312



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 13/110 (11%)

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           I   G ++ FG ++FG         +N+P       +   +AK V+CG  H+A++TE G+
Sbjct: 9   IPESGAIFTFGKSRFG---------DNLPNKF---WVRGDKAKSVACGDEHTALVTESGR 56

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           + ++G N +GQLG+ +      P  V  +     + +ACG  HT++  E+
Sbjct: 57  LFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATES 106


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 28/272 (10%)

Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P +
Sbjct: 393 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 451

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I                       SGK    +V  IACG  +SA +T  G L T+G G Y
Sbjct: 452 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 491

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG G
Sbjct: 492 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 551

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G      
Sbjct: 552 GSDGCKTPKLIEK--LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 609

Query: 437 IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P L+  + G    ++A G  H L+L E +++
Sbjct: 610 YPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEV 641



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----- 265
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L        
Sbjct: 2902 ALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKV 2961

Query: 266  ---ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IA G  H
Sbjct: 2962 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSH 3021

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 3022 SAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3081

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3082 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3139

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + ++ Q+
Sbjct: 3140 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3189



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 2958 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3000

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L++      + K  R  +++IA G  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3001 PRLIQ------ALKTKR--IRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLK 3052

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3053 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3112

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3113 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3170

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3171 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3230

Query: 457  HTL 459
            H++
Sbjct: 3231 HSV 3233



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 3939 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3998

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 3999 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4058

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4059 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4118

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4119 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4176

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4177 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4226



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 3954 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4013

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4014 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4057

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4058 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4100

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4101 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4152

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4153 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4210

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4211 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4245



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 149/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+ + G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2909 AGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSS--GTVPIPRQITALSSYVVKKVAVHSG 2966

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 2967 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIA 3016

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3017 YGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3076

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3077 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3117

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3118 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3171

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3172 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3229

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3230 SHSVAWT 3236



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 3915

Query: 284  GK----------------------------AGRSYVKEIAC--GGRHSAVVTDAGALLTF 313
            GK                                ++K++A   GG+H   ++  G + ++
Sbjct: 3916 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3975

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 3976 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4035

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4036 GHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4093

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4094 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4127



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2871 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2904

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G + + G    G+ G G ++  +  P   ++L    V+++A 
Sbjct: 2905 -VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 2963

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L++   L++KR + ++ G+ H
Sbjct: 2964 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQA--LKTKRIRDIAYGSSH 3021

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA LT  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3022 SAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3081

Query: 466  Q 466
            +
Sbjct: 3082 E 3082



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 130/332 (39%), Gaps = 81/332 (24%)

Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           ++VK AA     H +++   GEVY+WG              G  G       G    +P 
Sbjct: 405 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 446

Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
           E+    +  S K+AG+ VV      T SA   +E               + +S DE    
Sbjct: 447 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 504

Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI
Sbjct: 505 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 562

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             L+                           V ++ CG + S  +T  G + ++G G   
Sbjct: 563 EKLQDLD------------------------VIKVRCGSQFSIALTKDGQVYSWGKGDNQ 598

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN----QFGQLGT 375
           + GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N     F  LG 
Sbjct: 599 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGV 658

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHS 407
                   P+    P L+SK    ++CG   S
Sbjct: 659 ------TKPEPTAFPGLDSKHIVGIACGPAQS 684



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4117 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4175

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4176 CTEDGEVYTWG 4186



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 47/247 (19%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 427 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 483

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 484 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 534

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 535 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 584

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L+L++  +V  W
Sbjct: 585 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSW 644

Query: 237 GYGGEGQ 243
           G   + Q
Sbjct: 645 GSNDQCQ 651



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 3964 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4015

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4016 ACVTAAGDLYTWG 4028


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 35/295 (11%)

Query: 177  VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
            V++R      E+ +  +SG +       LV++    ++  V+ G  H   L++ G V+ W
Sbjct: 843  VEKRNLGPESEQDDGVSSGGKLNVPFGGLVSMR---QVVNVSCGWNHCAALTENGHVYTW 899

Query: 237  GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
            G  G G+LG G +  +   P L P               +Q     S       VKE+ C
Sbjct: 900  GRNGSGELGHGDKSGV---PQLHP---------------KQVIFFKS-----KCVKEVVC 936

Query: 297  GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            GG H+   T++G++  +G G  GQ G G       P    +L  + V Q+AAG  HT+ +
Sbjct: 937  GGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVV 996

Query: 357  SVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
               G V VFGG + GQLGTG+ +   VP KL   P +        +CG  H+A+LTE G+
Sbjct: 997  LKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPSIVQ-----AACGYCHTALLTEAGE 1051

Query: 416  VLSWGWNKYGQLGLGDSI--DRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            V + G    GQLG  D++  DR  P +V  ++G   R IACG +HT+ + +   +
Sbjct: 1052 VYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNV 1106



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 172/404 (42%), Gaps = 74/404 (18%)

Query: 92   GETPEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
            G+   PF  L +   VV  + GW HC ++TE G VYTWG              GS     
Sbjct: 862  GKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRN------------GSGELGH 909

Query: 151  KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-----------GDEFF 199
             D +G     P +Q      +  +EVV   + + AR ES +              GD   
Sbjct: 910  GDKSGVPQLHP-KQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTL 968

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP-H 257
               P  +     + +T++AAG  HT+++   G+V  +G G  GQLG G R  + VPT   
Sbjct: 969  HWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQ 1028

Query: 258  LIPCLEHAASGK-DRPLLVRQGSVNS-----SGKAGRS-------------------YVK 292
             +P +  AA G     LL   G V +     SG+ G +                    ++
Sbjct: 1029 AMPSIVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIR 1088

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR--------PSYASSLMDIQVE 344
             IACG  H+  +TD   + T+G G+ G    G+   + +        PS    LM  ++ 
Sbjct: 1089 FIACGSFHTIAITDLDNVYTWG-GVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRIS 1147

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQ-----LGTGVDQAENVPK--LLETPILESKRA 397
             ++ G  H+V  +++G VYV+      Q      G+G+  A    +  LL + I + + A
Sbjct: 1148 LVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDA 1207

Query: 398  KV------VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
            K        + G   + V+TE+G + SWG   +GQLGLGD  DR
Sbjct: 1208 KSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQGDR 1251


>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1055

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 184/446 (41%), Gaps = 64/446 (14%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKD-VCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
           G   E++ +  P    +  G   K+ VCGG     L     G + T GS    G   L  
Sbjct: 13  GIEVERNSMFEPRNCNVFSGRGLKEAVCGGQHSVFLL--HDGSVYTCGS---NGCGQLGH 67

Query: 89  GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
            K G +PE         +   + G AH ++V E G+V+ WG              G  G 
Sbjct: 68  NKPGTSPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGA-------------GDGGQ 114

Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----NPASGD------E 197
               +T     +P       D R  + +   +   +  ++ +        SG       E
Sbjct: 115 LGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGE 174

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
              L P  +    G+ + K+ AGG H+  LS  G V+GWG    GQLGL   I+    P 
Sbjct: 175 PSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLND-IQDRAVPC 233

Query: 258 LIPCLE-----HAASGKDRPLLVRQGSVNSSGKAGRS---------YVKEIACGGRHSAV 303
            I  L      H + G +    + +  + S+ +  R+         + + I C   HS  
Sbjct: 234 HIKFLRSQKVVHISCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFFCQRIGCS--HSTR 291

Query: 304 VT------DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           VT        G L TFG G +GQ GHGST+++L P     LM  +V QI  G  HT+  +
Sbjct: 292 VTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVSQITCGRHHTLAFA 351

Query: 358 -VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL-------ESKRAKV--VSCGARHS 407
              G VY FGGN  GQLGTG   AE     ++  +L       +SK+  V  ++CG  HS
Sbjct: 352 PSSGVVYAFGGNSHGQLGTGELSAEKCLYPVKINLLSGNNHRTDSKKYSVTKITCGGDHS 411

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSI 433
            +L  + Q L +    +  + +G+SI
Sbjct: 412 FLLYSNEQSLEYP-EDFRVINIGNSI 436



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 128/309 (41%), Gaps = 72/309 (23%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP LV      +IT V+ G  H++ +++ GQV+ WG G  GQLGLG+    V  P LI  
Sbjct: 73  SPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKR 132

Query: 262 L-EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
           L +H                          + ++ CG +H   ++  G L T+G    GQ
Sbjct: 133 LCDHR-------------------------IAQVMCGNQHCIALSKDGQLFTWGQNTSGQ 167

Query: 321 CGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            G G     +L P    SL  I + +I AG  H+  +S+ G V+ +G N+ GQLG    Q
Sbjct: 168 LGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQ 227

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLT---------------------------- 411
              VP       L S++   +SCG  H+A LT                            
Sbjct: 228 DRAVP--CHIKFLRSQKVVHISCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFFCQRIG 285

Query: 412 --------------EDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWW 456
                         +DG + ++G   +GQLG G + +  +P  ++ + G     I CG  
Sbjct: 286 CSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVSQITCGRH 345

Query: 457 HTLLLAETT 465
           HTL  A ++
Sbjct: 346 HTLAFAPSS 354



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 112/258 (43%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +   GG+H++ L   G V+  G  G GQLG                  H   G   P 
Sbjct: 35  LKEAVCGGQHSVFLLHDGSVYTCGSNGCGQLG------------------HNKPGTS-PE 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
           LV        G      +  ++CG  HS  V + G +  +G G  GQ G G+T   +R P
Sbjct: 76  LV--------GALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIP 127

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI- 391
                L D ++ Q+  G  H + +S +G+++ +G N  GQLG G  +     KL   P+ 
Sbjct: 128 RLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPS---KLFPQPLK 184

Query: 392 -LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR- 449
            L       ++ G  HS  L+  G V  WG NK GQLGL D  DR +P  +    FL   
Sbjct: 185 SLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIK---FLRSQ 241

Query: 450 ---NIACGWWHTLLLAET 464
              +I+CG  HT  L + 
Sbjct: 242 KVVHISCGDEHTAALTKV 259



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 6/143 (4%)

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
           N    P   +      +++   G  H+V +  +G VY  G N  GQLG   ++    P+L
Sbjct: 19  NSMFEPRNCNVFSGRGLKEAVCGGQHSVFLLHDGSVYTCGSNGCGQLGH--NKPGTSPEL 76

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS-IDRNIPSLVP-IH 444
           +    L+++R  +VSCG  HS  + E GQV +WG    GQLGLG +     IP L+  + 
Sbjct: 77  VGA--LDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLC 134

Query: 445 GFLPRNIACGWWHTLLLAETTQI 467
                 + CG  H + L++  Q+
Sbjct: 135 DHRIAQVMCGNQHCIALSKDGQL 157


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 140/274 (51%), Gaps = 24/274 (8%)

Query: 198 FFTLSPCLV-TLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           F  L  CLV  +N  +K + +VA   RHT  +   G+++ WG    G+LG G + ++  +
Sbjct: 76  FGNLEDCLVPRVNLSLKNVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHG-QFELSIS 134

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
            +++           +P+ V+          G   + +++CG  H+  +TD    LT+G 
Sbjct: 135 NNVVS----------QPMKVK-------ALEGEKVI-QVSCGSYHTGCLTDDKKALTWGL 176

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           GL G+ GHG T D   P    SL  + +++I+ G  HT  + V G++Y+FGG  FG+LG 
Sbjct: 177 GLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGF 236

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW-NKYGQLGLGDSID 434
           G      +P+LLE P LE  +   VS G++HSA +T+ G+V +WG   + G +  G   D
Sbjct: 237 GSTDDVLIPRLLEGP-LEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHD 295

Query: 435 RNIPS-LVPIHGFLPRNIACGWWHTLLLAETTQI 467
              P  L  +      +I+CG  H++ L++   I
Sbjct: 296 FLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDI 329



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 180/423 (42%), Gaps = 78/423 (18%)

Query: 67  SESGKLITWGSADDEGQSYLTSGKHGETPEPFP-----LPTEASVVKAAAGWAHCVSVTE 121
           S+SG ++ WGS++     Y   G  GE   P P     L   +S+ K + G  +  ++T 
Sbjct: 6   SKSG-VVVWGSSE-----YGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITN 59

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
           +G++  WG+  C          G  G       G        +   S K   +     R 
Sbjct: 60  SGDLILWGYGGC----------GQLG------FGNLEDCLVPRVNLSLKNVVQVACSDRH 103

Query: 182 TSSAREE--------SENPASGDEFFTLS--------PCLVTLNPGVKITKVAAGGRHTL 225
           T++            S+N   G   F LS        P  V    G K+ +V+ G  HT 
Sbjct: 104 TAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTG 163

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            L+D  +   WG G +G+LG G   + + TP LI  L                       
Sbjct: 164 CLTDDKKALTWGLGLQGRLGHGD-TQDIFTPKLIESL----------------------- 199

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVE 344
           AG   +KEI+CGG H+A++   G L  FG G +G+ G GST+D L P      L DIQ+ 
Sbjct: 200 AGLP-IKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQIT 258

Query: 345 QIAAGLWHTVCISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           +++ G  H+  ++  G+VY +G G + G +  G +     PK L    LE      +SCG
Sbjct: 259 KVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSN--LEKAFIVDISCG 316

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLL 460
             HS  L++ G + +WG  K    G+   I  N+PS  PI     +NI    C   H++ 
Sbjct: 317 NSHSVALSDVGDIYTWGMTKNIGHGI-QGIHPNMPSKHPI--LQNKNIVQVVCSSSHSIA 373

Query: 461 LAE 463
           L++
Sbjct: 374 LSD 376



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 35/241 (14%)

Query: 233 VWGWG-YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           VWG   YG  G  G     ++ P PHL+  L H +S                       +
Sbjct: 12  VWGSSEYGQHGSKGE----EVSPGPHLVDGLRHLSS-----------------------I 44

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
            +++CG  +SA +T++G L+ +G+G  GQ G G+  D L P    SL +  V Q+A    
Sbjct: 45  SKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLKN--VVQVACSDR 102

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI----LESKRAKVVSCGARHS 407
           HT  I   G +Y +G ++ G+LG G  +      ++  P+    LE ++   VSCG+ H+
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTLLLAETTQ 466
             LT+D + L+WG    G+LG GD+ D   P L+     LP + I+CG  HT +L  T +
Sbjct: 163 GCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGK 222

Query: 467 I 467
           +
Sbjct: 223 L 223



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 171/413 (41%), Gaps = 58/413 (14%)

Query: 22  VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V +WG    G    K   +SP P  + G      +    CG  ++ A + SG LI WG  
Sbjct: 10  VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
              G   L  G   +   P    +  +VV+ A    H  ++   GE+YTWG   C  + K
Sbjct: 70  ---GCGQLGFGNLEDCLVPRVNLSLKNVVQVACSDRHTAAILSNGELYTWG---CSKNGK 123

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-------- 190
           +       G F+   +    + P +      ++  +       T    ++ +        
Sbjct: 124 LGH-----GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGL 178

Query: 191 --NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
                 GD     +P L+    G+ I +++ GG HT IL   G+++ +G G  G+LG GS
Sbjct: 179 QGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238

Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
              +     LIP L         PL   Q             + +++ G +HSA VT  G
Sbjct: 239 TDDV-----LIPRLLEG------PLEDIQ-------------ITKVSLGSQHSAAVTKCG 274

Query: 309 ALLTFGWGLYGQCGH---GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
            + T  WG  G+ GH   G  +D L P   S+L    +  I+ G  H+V +S  G +Y +
Sbjct: 275 KVYT--WGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTW 332

Query: 366 GGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           G  +   +G G+     N+P   + PIL++K    V C + HS  L++ G ++
Sbjct: 333 GMTK--NIGHGIQGIHPNMPS--KHPILQNKNIVQVVCSSSHSIALSDIGALV 381


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 149/361 (41%), Gaps = 56/361 (15%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
           G   E +P+  P    +  G   K+V  GG    L   + G + T GS +  GQ  L   
Sbjct: 13  GIGVEGNPVFEPRICHVFSGRGLKEVACGG-QHTLFLLQDGSVYTCGS-NSCGQ--LGHD 68

Query: 90  KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
           K G +PE         +   + G AH V+V E G+V+ WG              G  G  
Sbjct: 69  KAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGA-------------GDGGQL 115

Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----NPASGD------EF 198
             ++      +P       D    + V   +   +   + +       +SG       E 
Sbjct: 116 GLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGET 175

Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
             LSP  V    G+ + ++ AGG H   LS  G V+GWG    GQLGL  +         
Sbjct: 176 SKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDK--------- 226

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGL 317
                     +DR       +V    K  RS  V  I+CG  H+A +T +G L TFG G 
Sbjct: 227 ----------QDR-------AVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGS 269

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTG 376
            GQ GHGS+N++L P     LM  +V QI  G  HT+  +   G VY FG N  GQLGTG
Sbjct: 270 RGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTG 329

Query: 377 V 377
           +
Sbjct: 330 I 330



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 129/296 (43%), Gaps = 38/296 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+  F    C V    G+K  +VA GG+HTL L   G V+  G    GQLG     K   
Sbjct: 18  GNPVFEPRICHVFSGRGLK--EVACGGQHTLFLLQDGSVYTCGSNSCGQLG---HDKAGN 72

Query: 255 TPHLIPCLE-----HAASGKDRPLLVR-QGSVNSSG-----------------------K 285
           +P L+  L+       + G+   + V  QG V   G                       K
Sbjct: 73  SPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKK 132

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVE 344
                + ++ CG +H   ++  G L T+G    GQ G G     +L PS   SL  I + 
Sbjct: 133 LCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLA 192

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           QI AG  H   +S+ G V+ +G N+ GQLG    Q   VP       L S+R   +SCG 
Sbjct: 193 QITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVP--CHIKFLRSQRVVYISCGD 250

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTL 459
            H+A LT+ G + ++G    GQLG G S +  +P  ++ + G     I CG  HTL
Sbjct: 251 EHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTL 306



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 130/285 (45%), Gaps = 37/285 (12%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP LV      KIT V+ G  H++ +++ GQV+ WG G  GQLGL +    V  P L+  
Sbjct: 73  SPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKK 132

Query: 262 L-EHAAS----GKDRPL-LVRQGSV-----NSSGKAGR----------SYVK-------- 292
           L +H+ S    G    + L R G +     NSSG+ G           S VK        
Sbjct: 133 LCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLA 192

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +I  GG H   ++ +GA+  FGWG    GQ G     D+  P +   L   +V  I+ G 
Sbjct: 193 QITAGGDHCFALSLSGAV--FGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGD 250

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AV 409
            HT  ++  G ++ FG    GQLG G    E +P+ +    L       ++CG  H+ A 
Sbjct: 251 EHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVME--LMGTEVSQITCGRHHTLAF 308

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACG 454
           +   G V ++G N +GQLG G   D   P  V  + FL  N+  G
Sbjct: 309 VPSSGTVYAFGCNSHGQLGTGILADLRSPHPVK-NDFLTLNLRKG 352



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 29/196 (14%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG   +GQLG+G        P   P + H  SG+                     +KE+A
Sbjct: 4   WGNARDGQLGIGVE----GNPVFEPRICHVFSGRG--------------------LKEVA 39

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGG+H+  +   G++ T G    GQ GH    +   P    +L   ++  ++ G  H+V 
Sbjct: 40  CGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNS--PELVGALDTQKITMVSCGRAHSVA 97

Query: 356 ISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
           ++ +G+V+V+G    GQLG    + A  +P+LL+  + +   ++VV CG +H   L+ DG
Sbjct: 98  VNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKK-LCDHSISQVV-CGNQHCIALSRDG 155

Query: 415 QVLSWGWNKYGQLGLG 430
           Q+ +WG N  GQLGLG
Sbjct: 156 QLFTWGQNSSGQLGLG 171



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 112/298 (37%), Gaps = 47/298 (15%)

Query: 46  LCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE 103
           L G    + +    CG A  +A +E G++  WG+ D       T+      P       +
Sbjct: 76  LVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCD 135

Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
            S+ +   G  HC++++  G+++TWG              G  G   K  T K S  P +
Sbjct: 136 HSISQVVCGNQHCIALSRDGQLFTWGQNSS----------GQLG-LGKGETSKLSPSPVK 184

Query: 164 Q---APPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKIT 215
                P +   AG +       S A     + ++      D+     PC +      ++ 
Sbjct: 185 SLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVV 244

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            ++ G  HT  L+  G ++ +G G  GQLG GS         L+P          R ++ 
Sbjct: 245 YISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSS-----NNELLP----------RRVME 289

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
             G          + V +I CG  H+ A V  +G +  FG   +GQ G G   D   P
Sbjct: 290 LMG----------TEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTGILADLRSP 337


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 166/401 (41%), Gaps = 87/401 (21%)

Query: 69  SGK-LITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
           SGK L  WGS    GQ  L     +   TP   P   + +V + A G  H + +T  G+V
Sbjct: 3   SGKELYCWGSTS-HGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKV 61

Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
           Y  G          + D+   G            LPT               KR + S  
Sbjct: 62  YACG----------SNDYSQLGH----------DLPT---------------KRPRMSP- 85

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
                        F L P L        I ++  G RH+L LSD GQV  WG    GQLG
Sbjct: 86  -------------FLLIPEL----QDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLG 128

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
             +  ++V  P ++           R L+ +              V +IACG  HS  +T
Sbjct: 129 HATDKEIVQLPKVV-----------RQLVTKT-------------VVQIACGNNHSLALT 164

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSY---ASSLMDIQVEQIAAGLWHTVCISVEGRV 362
             G L ++G  +YGQ G  S ND    +Y    ++L+ I +  IA G  H+  IS  G V
Sbjct: 165 SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV 224

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           + +G N  GQLG   +   + P  L+T  L +   + V+CG   S  LT +G V + G  
Sbjct: 225 FGWGRNNCGQLGLNDETNRSYPTQLKT--LRTLGVRFVACGDEFSVFLTNEGGVFTCGAG 282

Query: 423 KYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
            YGQLG G S +  +P +V  + G     +ACG  HTL L 
Sbjct: 283 AYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALV 323



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 109/242 (45%), Gaps = 35/242 (14%)

Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           +++ WG    GQLGLG    + + TP  IP     A                        
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTA------------------------ 41

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS---YASSLMDIQVEQIA 347
           V+++ACG RH+  +T  G +   G   Y Q GH     + R S       L D  + QI 
Sbjct: 42  VQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQIC 101

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARH 406
            G  H++ +S  G+V  +G N  GQLG   D +   +PK++    L +K    ++CG  H
Sbjct: 102 CGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVVQIACGNNH 159

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDR---NIP-SLVPIHGFLPRNIACGWWHTLLLA 462
           S  LT  G++ SWG N YGQLG+    D    N P  L  + G     IACG  H+ L++
Sbjct: 160 SLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 219

Query: 463 ET 464
           ++
Sbjct: 220 KS 221



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 31/208 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM--------VPTPHLIPCLEHA 265
           + ++A G  H+L L+  G+++ WG    GQLG+ S   +        + T   IP    A
Sbjct: 150 VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 209

Query: 266 ASGKDRPLLVRQGSV-----NSSGKAG------RSY-----------VKEIACGGRHSAV 303
             G    L+ + G+V     N+ G+ G      RSY           V+ +ACG   S  
Sbjct: 210 CGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVF 269

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRV 362
           +T+ G + T G G YGQ GHG +++++ P     LM   + Q+A G  HT+  +   GRV
Sbjct: 270 LTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRV 329

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETP 390
           Y FG    GQLGT   ++  +P+++  P
Sbjct: 330 YAFGLGSSGQLGTRSTKSLMLPQVVIGP 357



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 119/313 (38%), Gaps = 45/313 (14%)

Query: 28  LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
           LP   P  SP L  IP  L      +  CG     +LA S+ G++++WG  D     + T
Sbjct: 76  LPTKRPRMSPFLL-IP-ELQDYVIIQICCGSR--HSLALSDWGQVLSWGDNDCGQLGHAT 131

Query: 88  SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
             +  + P+        +VV+ A G  H +++T  GE+Y+WG       + +    G   
Sbjct: 132 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG-------SNIYGQLGVNS 184

Query: 148 SFQKDSTGKQSALPTEQAPPSDKRA--GEEVVKRRKTSSA----REESENPASGDEFFTL 201
                       L T    P    A  G       K+ +     R         DE    
Sbjct: 185 PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 244

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIP 260
            P  +     + +  VA G   ++ L++ G V+  G G  GQLG G S  +M+P      
Sbjct: 245 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP------ 298

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYG 319
                     R ++   GS           + ++ACG RH+ A+V   G +  FG G  G
Sbjct: 299 ----------RMVMELMGST----------ITQVACGNRHTLALVPSRGRVYAFGLGSSG 338

Query: 320 QCGHGSTNDQLRP 332
           Q G  ST   + P
Sbjct: 339 QLGTRSTKSLMLP 351



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +Y +G    GQLG G  + E +    + P       + V+CG RH+  LT  G+V + G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66

Query: 422 NKYGQLG--LGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           N Y QLG  L     R  P L+   +  ++   I CG  H+L L++  Q+
Sbjct: 67  NDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQV 116


>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 41/260 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  + L   +KI  V  G  H LILS  G+ + + Y                       
Sbjct: 87  TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYS---------------------- 124

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           ++H          +R  S+    K     + +I CG  HS  ++  G L  +G  L+GQ 
Sbjct: 125 MKH----------LRSESILQEKK-----IIQITCGDYHSLALSKGGELFAWGQNLHGQL 169

Query: 322 GHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
           G G T      P     L  + + QI+AG  H++ +S+ G +Y +G N+FGQLG G  ++
Sbjct: 170 GVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTES 229

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           ++ P L+E   L++++ + ++CG  HSA+LT+DG + ++G  K+GQLG   + +   P L
Sbjct: 230 KDSPSLIEA--LDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCL 287

Query: 441 VP-IHGFLPRNIACGWWHTL 459
           V  + G     IACG WHTL
Sbjct: 288 VAELVGNRVTQIACGRWHTL 307



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 119/244 (48%), Gaps = 34/244 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G ++ WG    GQLGLG            
Sbjct: 178 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 225

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               H  S KD P L+               V+ +ACGG HSA++T  G L TFG G +G
Sbjct: 226 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 272

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L+  +V QIA G WHT+  +S  G+V+ FG  + GQLG G  
Sbjct: 273 QLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGT 332

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRN 436
             + +P  L   +  S+  K+ S  +    ++   G   +L W   +   + L     R 
Sbjct: 333 LDQLIP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRT 386

Query: 437 IPSL 440
           IP+L
Sbjct: 387 IPTL 390



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 12/134 (8%)

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLE----TP 390
           S L + ++ QI  G +H++ +S  G ++ +G N  GQLG G    +   P+++E     P
Sbjct: 132 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVP 191

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPR 449
           + +      +S G  HS  L+  G + SWG N++GQLGLG +  ++ PSL+  +      
Sbjct: 192 LAQ------ISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVE 245

Query: 450 NIACGWWHTLLLAE 463
            +ACG  H+ LL +
Sbjct: 246 FLACGGSHSALLTQ 259



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 128/307 (41%), Gaps = 65/307 (21%)

Query: 77  SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
           S+D +   Y  S KH  +     +  E  +++   G  H +++++ GE++ WG +     
Sbjct: 113 SSDGKPFEYDYSMKHLRSES---ILQEKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQ 168

Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-- 194
             V R F S       +T  Q        P +   AGE        S A   S N  S  
Sbjct: 169 LGVGRTFPS-------TTTPQIVEHLAGVPLAQISAGE------AHSMALSMSGNIYSWG 215

Query: 195 GDEFFTL---------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
            +EF  L         SP L+      K+  +A GG H+ +L+  G ++ +G G  GQLG
Sbjct: 216 KNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLG 275

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVV 304
                             ++   + RP LV +   N         V +IACG  H+ A V
Sbjct: 276 -----------------HNSTQNELRPCLVAELVGNR--------VTQIACGRWHTLAYV 310

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           +D G + +FG G  GQ G+G T DQL   P   SS  ++++E       HT   S +  +
Sbjct: 311 SDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLES------HT---SEKELI 361

Query: 363 YVFGGNQ 369
            + GGNQ
Sbjct: 362 MIAGGNQ 368


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 133/273 (48%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P L+      K+ K+AA   G+H L LS  G+V+ WG G  G+LG G     +  P 
Sbjct: 444 TLAPMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD-TTYLEEPT 502

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       +GK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 503 MIAAF--------------------NGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGN 542

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ DQ  P   ++L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 543 YGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 602

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV +WG     +LG G     
Sbjct: 603 GGSDGCKTPKLVEK--LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHV 660

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L +  ++
Sbjct: 661 RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEV 693



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 134/290 (46%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------ 264
             + + +VA G +    ++  G+++  G    G+LGLG     +P P  I  L +      
Sbjct: 2762 ALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKV 2821

Query: 265  --AASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 2822 AVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSH 2881

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L ++G G YG+ GHG    QLRP     L+  +V Q+A G     T+ ++ 
Sbjct: 2882 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD 2941

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 2942 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 2999

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + +T Q+
Sbjct: 3000 WGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQV 3049



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 134/306 (43%), Gaps = 82/306 (26%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH + L+  G+V+ WG G +G+LG  SR+                  
Sbjct: 2815 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 2858

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + KA R  +++IACG  HSA +T +G L ++G G YG+ GHG    
Sbjct: 2859 -DKPRLIE------ALKAKR--IRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT 2909

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--- 383
            QLRP     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+   
Sbjct: 2910 QLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 2969

Query: 384  -------------------------------------------------PKLLETPILES 394
                                                             P+++E   L  
Sbjct: 2970 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG--LRG 3027

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
            K+   V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +AC
Sbjct: 3028 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3087

Query: 454  GWWHTL 459
            G  H++
Sbjct: 3088 GSSHSV 3093



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 145/373 (38%), Gaps = 100/373 (26%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG  E                      G  +  P ++  
Sbjct: 3847 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGNRSPCDRPR 3888

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
              +   G EVV     ++    S    +  E FT                 L P LV   
Sbjct: 3889 VIESLRGVEVVD---IAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDAL 3945

Query: 210  PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
             G ++  VA  +G   TL L+D   VW WG G  G+LG G                  + 
Sbjct: 3946 QGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-----------------GSD 3988

Query: 268  GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
            G   P+      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +
Sbjct: 3989 GCKTPM-----KIDSLTGLG---VIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4040

Query: 328  DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF-----------------GGNQF 370
               RP     L   +V  IA G  H VC + +GR+ VF                 G N  
Sbjct: 4041 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDE 4100

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            GQLG G   A   P+L+    L+ K+   V+CG+ H+         LSW  +K    G  
Sbjct: 4101 GQLGDGTTNAIQRPRLVAA--LQGKKINRVACGSAHT---------LSWSTSKPTNAG-- 4147

Query: 431  DSIDRNIPSLVPI 443
                  +P+ VP+
Sbjct: 4148 -----KLPAQVPM 4155



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 153/373 (41%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 2769 AGGSKSLFAVTVEGKIYACGEA--------TNGRLGLGLSSGTIPIPRQITALSNYVVKK 2820

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H +++T  G+V++WG            D G  G F + +  K   +   +A 
Sbjct: 2821 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKAK 2870

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P LV +  G ++ +VA G
Sbjct: 2871 RIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG 2930

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 2931 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 2972

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHG+     +P     L
Sbjct: 2973 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGL 3025

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3026 RGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3083

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3084 RVACGSSHSVAWT 3096



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 118/236 (50%), Gaps = 33/236 (13%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            T +  L TL P   I     GG  TL  ++  G+++  GYG  G+LG     + V TP L
Sbjct: 3782 TPTEALATLRPVQLI-----GGEQTLFAVTADGKLYATGYGAGGRLG-IGGTESVSTPTL 3835

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + +R+ +VNS              GG+H   ++  G + ++G    
Sbjct: 3836 LESIQH--------VFIRKVAVNS--------------GGKHCLALSSEGEVYSWGEAED 3873

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+ +   RP    SL  ++V  IAAG  H+ CI+  G ++ +G  ++G+LG G  
Sbjct: 3874 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDS 3933

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
            + +  PKL++   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G S
Sbjct: 3934 EDQLKPKLVDA--LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGS 3987



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2731 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2764

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G +   G    G+ G G ++  +  P   ++L +  V+++A 
Sbjct: 2765 -VVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAV 2823

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 2824 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKAKRIRDIACGSSH 2881

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA +T  G++ SWG  +YG+LG GD+  +  P LV +  G     +ACG      LA T 
Sbjct: 2882 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD 2941

Query: 466  Q 466
            +
Sbjct: 2942 E 2942



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 147/363 (40%), Gaps = 72/363 (19%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAA--GWAHCVSV 119
           +  SE G LI   S     Q+Y ++     T  P  + + +S  +VK AA     H +++
Sbjct: 419 IVCSEKGFLILSSSGAVYTQNYKST-----TLAPMLIHSLSSRKMVKLAAHPDGQHYLAL 473

Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
           +  GEV++WG            D G  G    D+T  +   PT  A  + K+AG+ VV  
Sbjct: 474 SSNGEVFSWG----------CGDGGRLG--HGDTTYLEE--PTMIAAFNGKQAGKHVVH- 518

Query: 180 RKTSSAREESENPASGDEFFT-----------------LSPCLVTLNPGVKITKVA--AG 220
              +     S       E +T                  +P LVT   G+K+  VA  +G
Sbjct: 519 --IACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSG 576

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
              TL +++ GQVW WG G  G+LG G                  + G   P LV     
Sbjct: 577 DAQTLAVTENGQVWSWGDGDYGKLGRG-----------------GSDGCKTPKLVE---- 615

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
               K     + ++ CG + S  +T  G + T+G G   + GHG+      P    +L  
Sbjct: 616 ----KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQG 671

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
            +V  +A G  H + ++ +G V+ +G N   Q    +   +  PK L  P L SK    +
Sbjct: 672 KKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTLFSNKKQPKAL--PGLNSKHIVGI 729

Query: 401 SCG 403
           SCG
Sbjct: 730 SCG 732



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 3760 YGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3819

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      R   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 3820 GRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 3879

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    +IA G  H+
Sbjct: 3880 NRSPCDRPRVIESLRGVEVVDIAAGGAHS 3908



 Score = 41.6 bits (96), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
           CG G    LA +E+G++ +WG  D     Y   G+ G    +TP+      +  +VK   
Sbjct: 573 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 627

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G    V++T+ G+VYTWG
Sbjct: 628 GSQFSVALTKDGQVYTWG 645


>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 41/260 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  + L   +KI  V  G  H LILS  G+ + + Y                       
Sbjct: 87  TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYS---------------------- 124

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           ++H          +R  S+    K     + +I CG  HS  ++  G L  +G  L+GQ 
Sbjct: 125 MKH----------LRSESILQEKK-----IIQITCGDYHSLALSKGGELFAWGQNLHGQL 169

Query: 322 GHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
           G G T      P     L  + + QI+AG  H++ +S+ G +Y +G N+FGQLG G  ++
Sbjct: 170 GVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTES 229

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           ++ P L+E   L++++ + ++CG  HSA+LT+DG + ++G  K+GQLG   + +   P L
Sbjct: 230 KDSPSLIEA--LDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCL 287

Query: 441 VP-IHGFLPRNIACGWWHTL 459
           V  + G     IACG WHTL
Sbjct: 288 VAELVGNRVTQIACGRWHTL 307



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 119/244 (48%), Gaps = 34/244 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G ++ WG    GQLGLG            
Sbjct: 178 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 225

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               H  S KD P L+               V+ +ACGG HSA++T  G L TFG G +G
Sbjct: 226 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 272

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L+  +V QIA G WHT+  +S  G+V+ FG  + GQLG G  
Sbjct: 273 QLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGT 332

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRN 436
             + +P  L   +  S+  K+ S  +    ++   G   +L W   +   + L     R 
Sbjct: 333 LDQLIP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRT 386

Query: 437 IPSL 440
           IP+L
Sbjct: 387 IPTL 390



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 12/134 (8%)

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLE----TP 390
           S L + ++ QI  G +H++ +S  G ++ +G N  GQLG G    +   P+++E     P
Sbjct: 132 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVP 191

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPR 449
           + +      +S G  HS  L+  G + SWG N++GQLGLG +  ++ PSL+  +      
Sbjct: 192 LAQ------ISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVE 245

Query: 450 NIACGWWHTLLLAE 463
            +ACG  H+ LL +
Sbjct: 246 FLACGGSHSALLTQ 259



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 128/307 (41%), Gaps = 65/307 (21%)

Query: 77  SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
           S+D +   Y  S KH  +     +  E  +++   G  H +++++ GE++ WG +     
Sbjct: 113 SSDGKPFEYDYSMKHLRSES---ILQEKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQ 168

Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-- 194
             V R F S       +T  Q        P +   AGE        S A   S N  S  
Sbjct: 169 LGVGRTFPS-------TTTPQIVEHLAGVPLAQISAGE------AHSMALSMSGNIYSWG 215

Query: 195 GDEFFTL---------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
            +EF  L         SP L+      K+  +A GG H+ +L+  G ++ +G G  GQLG
Sbjct: 216 KNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLG 275

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVV 304
                             ++   + RP LV +   N         V +IACG  H+ A V
Sbjct: 276 -----------------HNSTQNELRPCLVAELVGNR--------VTQIACGRWHTLAYV 310

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           +D G + +FG G  GQ G+G T DQL   P   SS  ++++E       HT   S +  +
Sbjct: 311 SDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLES------HT---SEKELI 361

Query: 363 YVFGGNQ 369
            + GGNQ
Sbjct: 362 MIAGGNQ 368


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 142/319 (44%), Gaps = 54/319 (16%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD     +P L   + G  I  V AG   T +L++ G+V+  GY  EGQ G+G   + VP
Sbjct: 27  GDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGEIDETVP 86

Query: 255 ------------TPHLIPC----LEHAASGKDRPLLVRQ-------GSVNS----SGKAG 287
                        P   P     L H+ +G +  ++V +       G  NS     G+ G
Sbjct: 87  EMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRNNSGQLGHGEVG 146

Query: 288 RSY-------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
           + Y             V ++AC   H+ VVTD     TFG   YGQ GHG  + +  P+ 
Sbjct: 147 KGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAA 206

Query: 335 ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT--GVDQAENVPKLLETPIL 392
            +    + V  +A G++HTV     G +Y FG N  GQLG   G  +   V     T ++
Sbjct: 207 LACFQGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGESRFTPVQHRACTSVV 266

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR----NIPSLVPIHGFLP 448
           E      ++CG  H+  L+  G+V+++G N YGQLGLG          +P L    G   
Sbjct: 267 EQ-----LACGYYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLA---GLRI 318

Query: 449 RNIACGWWHTLLLAETTQI 467
             +ACG +HT+ L +  ++
Sbjct: 319 IQVACGSYHTISLDDEGRV 337



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 118/252 (46%), Gaps = 29/252 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G ++TKVA    HT++++D  + W +G  G GQLG G               +H++    
Sbjct: 160 GYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHG---------------DHSSRSAP 204

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
             L   QG            V  +ACG  H+ V   +G L +FG   +GQ G      + 
Sbjct: 205 AALACFQGLG----------VLSVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGESRF 254

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P    +   + VEQ+A G +HTV +S  G V  FG N +GQLG G    E+  +  + P
Sbjct: 255 TPVQHRACTSV-VEQLACGYYHTVALSRAGEVVAFGRNDYGQLGLG--HRESTWQGGQVP 311

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPR 449
            L   R   V+CG+ H+  L ++G+V  +G N +GQLG G   D   P  V  +      
Sbjct: 312 DLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVC 371

Query: 450 NIACGWWHTLLL 461
            +A G++HTL L
Sbjct: 372 QVAAGFYHTLCL 383



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 112/281 (39%), Gaps = 52/281 (18%)

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD----------RPLLVRQGSV- 280
           +++G+G    G+LGLG  ++        P L   + GKD            +L   G V 
Sbjct: 12  ELYGFGQNACGELGLGDTLE-----RHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVY 66

Query: 281 ----NSSGK-----------------------------AGRSYVKEIACGGRHSAVVTDA 307
               NS G+                             AGR  +     G  H  VVT+ 
Sbjct: 67  SCGYNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEE 126

Query: 308 GALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           G L T G    GQ GHG        P   +     +V ++A    HTV ++ + R + FG
Sbjct: 127 GELQTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFG 186

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
           GN +GQLG G   + + P  L     +      V+CG  H+ V    G + S+G N +GQ
Sbjct: 187 GNGYGQLGHGDHSSRSAPAAL--ACFQGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQ 244

Query: 427 LGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL     R  P        +   +ACG++HT+ L+   ++
Sbjct: 245 LGLEGGESRFTPVQHRACTSVVEQLACGYYHTVALSRAGEV 285



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 14/104 (13%)

Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
           MD+ +++             E  +Y FG N  G+LG G     + P L +T     K   
Sbjct: 1   MDVDIDRFQ-----------ERELYGFGQNACGELGLGDTLERHTPTLSQTS--RGKDIV 47

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            V+ G   +AVLT  G+V S G+N  GQ G+G+ ID  +P +VP
Sbjct: 48  GVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGE-IDETVPEMVP 90


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 132/262 (50%), Gaps = 32/262 (12%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLI 259
           SP LV    G  ++ +A G +H++ L + GQ + WG    GQLG  LGS           
Sbjct: 78  SPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGS----------- 126

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               HA   +D+P +++  +  +        V ++ACG  H+ V+T+ G L  +G   YG
Sbjct: 127 ----HA---QDKPKIIKTLATKN--------VIQVACGSYHTVVLTNNGDLYAWGANSYG 171

Query: 320 QCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           QCG G+ +N +  P   SS++ I +  IA G  HT  +S  G V+ +G N  GQLG    
Sbjct: 172 QCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDR 231

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           ++   P  L+T  L + +   +SCG   +A LT DG V + G  +YGQ G G++ D  +P
Sbjct: 232 ESRCYPTHLKT--LRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVP 289

Query: 439 -SLVPIHGFLPRNIACGWWHTL 459
             ++ + G     +ACG  H L
Sbjct: 290 RKVMELMGSTVTQVACGRRHML 311



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 6/180 (3%)

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIA 347
           S++++I+ G  H+  +++ G L T G    GQ G  + + D   P    +     +  IA
Sbjct: 35  SHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIA 94

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGV-DQAENVPKLLETPILESKRAKVVSCGARH 406
            GL H++ +   G+ + +G +  GQLG+ +   A++ PK+++T  L +K    V+CG+ H
Sbjct: 95  CGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKT--LATKNVIQVACGSYH 152

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP--SLVPIHGFLPRNIACGWWHTLLLAET 464
           + VLT +G + +WG N YGQ GLG+  ++     +L  I G     IACG  HT  L+++
Sbjct: 153 TVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQS 212



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 11/147 (7%)

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G+ +  ++P+ +       ++QI+AG +HT+ +S  G +Y  G N+ GQLG   + A+  
Sbjct: 18  GNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGT 77

Query: 384 -PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG--LGDSIDRNIPSL 440
            P L++T   +      ++CG +HS  L E GQ  SWG +  GQLG  LG S  ++ P +
Sbjct: 78  SPVLVDT--FKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLG-SHAQDKPKI 134

Query: 441 VPIHGFLPRN---IACGWWHTLLLAET 464
             I     +N   +ACG +HT++L   
Sbjct: 135 --IKTLATKNVIQVACGSYHTVVLTNN 159


>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
           [Ornithorhynchus anatinus]
          Length = 721

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 130/253 (51%), Gaps = 30/253 (11%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +GD   T+ P  +    G KIT ++ G G H ++ +  G+V+ WG+    QLG G+    
Sbjct: 250 TGDVQNTIEPRRIDSLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGT---- 305

Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
             T H LIPC  H ++      LV +  V            E+ACG  HS V+T  G + 
Sbjct: 306 --TNHGLIPC--HVSTN-----LVNKKVV------------EVACGSHHSLVLTSDGEVY 344

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV-EQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +G+   GQ G GST +Q  P   +S +  ++   IA G   ++ +   G VYV+G N  
Sbjct: 345 AWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGN 404

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           GQLG G   + N P       L+  R + V+CG  H+ VLT++GQ+ +WG N YGQLG G
Sbjct: 405 GQLGLG--SSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTG 462

Query: 431 DSIDRNIPSLVPI 443
           +  +++ P  VP+
Sbjct: 463 NKSNQSYPIPVPV 475



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 113/223 (50%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC V+ N    K+ +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 310 LIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQ-PIPRRV 368

Query: 260 -PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++  +                          IACG   S  V ++G +  +G+   
Sbjct: 369 TSCLQNKIA------------------------TNIACGQMCSMAVVESGEVYVWGYNGN 404

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++  G  HT+ ++ EG++Y +G N +GQLGTG  
Sbjct: 405 GQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNK 464

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P  +  P+ + +  ++ +C + H SA  T+ G V  WG
Sbjct: 465 SNQSYP--IPVPVEKDRIIEIAACHSAHTSAAKTQSGHVYMWG 505



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+I C     G H  V T  G + T+G   Y Q G+G+TN  L P + S+ L++ +V ++
Sbjct: 268 KKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEV 327

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G  H++ ++ +G VY +G N  GQ+G+G    + +P+ + T  L++K A  ++CG   
Sbjct: 328 ACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRV-TSCLQNKIATNIACGQMC 386

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  + E G+V  WG+N  GQLGLG S ++  P  +  + G   + + CG+ HTL+L +  
Sbjct: 387 SMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEG 446

Query: 466 QI 467
           Q+
Sbjct: 447 QL 448



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 5/109 (4%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTEDGQVLSWG 420
           V+V G N  G LGTG  Q    P+ +++  L  K+   +S G+  H  V T +G+V +WG
Sbjct: 237 VFVLGTNCSGCLGTGDVQNTIEPRRIDS--LCGKKITCLSYGSGPHVVVATAEGEVYTWG 294

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAETTQI 467
            N Y QLG G +    IP  V  +    +   +ACG  H+L+L    ++
Sbjct: 295 HNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEV 343



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 22/173 (12%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           VY WGY   G     S    PIP R+      K      CG   ++A  ESG++  WG  
Sbjct: 343 VYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGY- 401

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
              G   L  G  G  P P  +       V +   G+AH + +T+ G++Y WG       
Sbjct: 402 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWG------- 452

Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
                 +G  G+  K +      +P E+    D+           TS+A+ +S
Sbjct: 453 ---ANSYGQLGTGNKSNQSYPIPVPVEK----DRIIEIAACHSAHTSAAKTQS 498


>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 954

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 127/260 (48%), Gaps = 42/260 (16%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRP 272
           I  +A G +H++ L+  G+V+ WG G +G+LG G  R + VP   ++  L H        
Sbjct: 298 IIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRK-IMALLRHR------- 349

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                             ++ ++CGG H+AVV+D   + TFG G  G+ G G T     P
Sbjct: 350 ------------------IEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTP 391

Query: 333 SYASS--LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV-DQAENVPKLLET 389
               +      ++ ++  G   T+ +S+EGRV+ +G    GQ G G  DQ E  P L+E 
Sbjct: 392 QEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIEK 451

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-------DSIDRNIPSLVP 442
             L   R   V+CG  HS  LT   +VLSWG  +YGQLG G       +SID+   SL  
Sbjct: 452 --LLDNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQ---SLFA 506

Query: 443 IHGFLPRNIACGWWHTLLLA 462
             G  P+ I CG +H+++ A
Sbjct: 507 CEGGHPQRIYCGAFHSIITA 526



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 119/254 (46%), Gaps = 29/254 (11%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           +I  V+ GG HT ++SD   V+ +G G  G+LGLG   K   TP  +P            
Sbjct: 349 RIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGD-TKCHDTPQEVP------------ 395

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLR 331
                     +    +  + ++ CG   +  ++  G + ++G    GQCG G  + D+L 
Sbjct: 396 ----------TWGFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELS 445

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P     L+D ++  +A G  H++ ++ +  V  +G  ++GQLG G+   +  P+ ++  +
Sbjct: 446 PCLIEKLLDNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLGRGI-VYQPSPESIDQSL 504

Query: 392 L--ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              E    + + CGA HS +      + +WG N YG  GLG +++R+IP        +  
Sbjct: 505 FACEGGHPQRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRDIPERNDFFANIDT 564

Query: 450 NIA--CGWWHTLLL 461
           ++   CG  +T+ L
Sbjct: 565 DVVLCCGHKYTIAL 578



 Score = 42.0 bits (97), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 11/114 (9%)

Query: 22  VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
           V++WG  PG S   S +L+P    +  G S  ++  GG    L  S +G +    S++D 
Sbjct: 213 VFLWGRPPGWSHTNS-LLTPQKVDVLPGQSIAEIACGG-NHILYLSSAGDVY---SSEDH 267

Query: 82  GQSYLTSGKHGETPEPFP-LPTEAS-----VVKAAAGWAHCVSVTEAGEVYTWG 129
             S        +TP+    L  E +     ++  A G  H V++T AGEVY+WG
Sbjct: 268 AISTTEPTNMLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWG 321


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 124/236 (52%), Gaps = 33/236 (13%)

Query: 213 KITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGK 269
           ++ K+AA   G+H L L+   +V+ WG G  G+LG G +  K  PT      L  A  GK
Sbjct: 514 EVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPT------LIQALKGK 567

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
           D                    + ++ CGG +SA ++  GAL T+G G YG+ GHG+  D 
Sbjct: 568 D--------------------IIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDC 607

Query: 330 LRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           L P+  S+L D  + ++A G +  HT+CI+ +G+VY +G   +G+LG G      +P+L+
Sbjct: 608 LTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLI 667

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           E   L++ +   V CGA+ S  L+EDG V +WG  +  +LG     +   P +V +
Sbjct: 668 EK--LQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEV 721



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 29/249 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD      P L+    G  I  V  GG ++  +S  G ++ WG G  G+LG G+    + 
Sbjct: 550 GDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCL- 608

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLT 312
           TP +I  L                           ++ ++ACG    H+  +T  G + +
Sbjct: 609 TPTMISALSD------------------------EHIIKVACGSFYAHTLCITSQGKVYS 644

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G YG+ G G ++    P     L ++++ Q+  G   +V +S +G VY +G  +  +
Sbjct: 645 WGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWK 704

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG   ++    P+++E  +L  ++   VS G  H   LT+ G+V  WG N+  Q+     
Sbjct: 705 LGHPTEENVRFPEMVE--VLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSE 762

Query: 433 IDRNIPSLV 441
           +    P L+
Sbjct: 763 LFVQQPRLI 771



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 29/217 (13%)

Query: 201 LSPCLVTLNPGVKITKVAAGG--RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L+P +++      I KVA G    HTL ++  G+V+ WG G  G+LG G           
Sbjct: 608 LTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRG----------- 656

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
                  + G   P L+         K     + ++ CG + S  +++ G + T+G G  
Sbjct: 657 ------GSDGSKLPRLIE--------KLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEG 702

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            + GH +  +   P     L D +V  ++ G+ H + ++ +G VY +G N+  Q+    +
Sbjct: 703 WKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSE 762

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
                P+L+E   L+ ++   V CG   S   T+D +
Sbjct: 763 LFVQQPRLIEA--LKGQKVVGVCCGPAQSFAWTDDNE 797



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 46/268 (17%)

Query: 18  KETVVYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
           K+  VY WG   G       TS ++ P L  I A L G D     CGG   ++ A S +G
Sbjct: 532 KDYEVYSWGNGDGGRLGHGDTSTKEEPTL--IQA-LKGKDIIDVECGGT--YSAAISANG 586

Query: 71  KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG--WAHCVSVTEAGEVYTW 128
            L TWG  +  G+    + +   TP      ++  ++K A G  +AH + +T  G+VY+W
Sbjct: 587 ALYTWGRGN-YGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSW 645

Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
           G            D+G  G    D     S LP       + +  +     + + +  E+
Sbjct: 646 G----------DGDYGKLGRGGSDG----SKLPRLIEKLQNVKIVQVYCGAQFSVALSED 691

Query: 189 SE-------------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
                          +P   +  F   P +V +    K+  V+ G  H L L+D G+V+G
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRF---PEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYG 748

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           WG     Q+   S +  V  P LI  L+
Sbjct: 749 WGKNENKQICDSSEL-FVQQPRLIEALK 775


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 195/479 (40%), Gaps = 52/479 (10%)

Query: 22  VYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
           V+ WGY   G   + S      P  + G  S       G     A + SG ++ WG  + 
Sbjct: 81  VWCWGYNWSGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCALTSSGGVMCWG-GNY 139

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
            GQ  L  G + +   P  +    S V A AAG AH  ++  +G V+ WG+        +
Sbjct: 140 FGQ--LGDGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCALMSSGGVWCWGY-------NL 190

Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF 199
           +   G   +    +    S LP+E    +   A    +          ++     GD  F
Sbjct: 191 SGQLGDGSTIYHITPVAVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSF 250

Query: 200 TLS--PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           T S  P  V   P   +T +AAGGR+T  L+  G VW WG    GQLG GS      TP 
Sbjct: 251 TDSSTPAAVGGLP-SGVTAIAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNR-STPG 308

Query: 258 LIPCLEH-----AASGKDRPLLVRQGSV-----NSSGKAGR----------------SYV 291
            +  L       AA G     L   G V     N SG+ G                 S V
Sbjct: 309 AVGGLPSGVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGV 368

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
             IA GG H+   T +G +  +G   YGQ G G+T D+  P   S L    V  IAAG +
Sbjct: 369 TAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPS-GVTAIAAGNY 427

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           HT  ++    V+ +G N +GQLG G     + P  +    L S     ++ G  H+  LT
Sbjct: 428 HTCALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSG--LPSG-VTAIAAGNYHTCALT 484

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAETTQI 467
             G V  WG N  GQLG G + +R+ P  V   G LP     IA G +HT  L  +  +
Sbjct: 485 SSGGVWCWGRNDSGQLGDGTTTNRSTPGAV---GGLPSGVTAIAAGDYHTCALMSSGGV 540



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 127/290 (43%), Gaps = 37/290 (12%)

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-- 264
           + +P   +T +AAG  HT  L+  G+VW WGY   GQLG GS      TP  +  L    
Sbjct: 55  SFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDR-STPVAVSGLPSGV 113

Query: 265 ---AASGKDRPLLVRQGSV-----NSSGKAGR----------------SYVKEIACGGRH 300
              AA G     L   G V     N  G+ G                 S V  IA GG H
Sbjct: 114 TAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAH 173

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           +  +  +G +  +G+ L GQ G GST   + P   S L   +V  IAAG  HT  ++  G
Sbjct: 174 TCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPS-EVTAIAAGYAHTCALTGSG 232

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            V+ +G N FGQLG G     + P  +    L S     ++ G R++  LT  G V  WG
Sbjct: 233 GVWCWGDNGFGQLGDGSFTDSSTPAAVGG--LPSG-VTAIAAGGRYTCALTSSGGVWCWG 289

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAETTQI 467
            N  GQLG G   +R+ P  V   G LP     IA G  HT  L  +  +
Sbjct: 290 RNDSGQLGDGSFTNRSTPGAV---GGLPSGVTAIAAGGAHTCALTSSGGV 336



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 174/437 (39%), Gaps = 67/437 (15%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAG 123
           A + SG +  WG  +D GQ  L  G + +   P  +    S V A AAG AH  + T +G
Sbjct: 329 ALTSSGGVWCWG-GNDSGQ--LGDGSYTDRSTPGAVSGLPSGVTAIAAGGAHTCARTSSG 385

Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
            V+ WG              G   +  + + G  S LP+             +      +
Sbjct: 386 GVWCWG-------GNFYGQLGDGTTTDRSTPGAVSGLPSGV---------TAIAAGNYHT 429

Query: 184 SAREESENP-ASGDEFFTLSPCLVTLN---PGV------KITKVAAGGRHTLILSDMGQV 233
            A   S+     GD F+       T N   PG        +T +AAG  HT  L+  G V
Sbjct: 430 CALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGNYHTCALTSSGGV 489

Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----AASGKDRPLLVRQGSV-----NSS 283
           W WG    GQLG G+      TP  +  L       AA       L+  G V     N+ 
Sbjct: 490 WCWGRNDSGQLGDGTTTNR-STPGAVGGLPSGVTAIAAGDYHTCALMSSGGVWCWGLNNR 548

Query: 284 GKAGR----------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
           G+ G                 S V  IA G  H+  +T +  +  +G    GQ G G+T 
Sbjct: 549 GQLGDGSYTDSSTPVAVGGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTT 608

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           ++  P   S L    V  IAAG +HT  ++  G V+ +G N  GQLG G     + P  +
Sbjct: 609 NRSTPVAVSGLPS-GVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAV 667

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
               L S     ++ G  H+  LT  G V  WG N YGQLG G + +R+ P  V     L
Sbjct: 668 SG--LPSG-VTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVS---GL 721

Query: 448 PRN---IACGWWHTLLL 461
           P     IA G +HT  L
Sbjct: 722 PSGVTAIAAGVYHTCAL 738



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 108/251 (43%), Gaps = 31/251 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI---PCLEHAASGKD 270
           +T +AAG  HT  L   G VW WG    GQLG GS      TP  +   P    A +  +
Sbjct: 521 VTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDS-STPVAVGGLPSGVMAIAAGN 579

Query: 271 RPLLVRQGS-------VNSSGKAGR----------------SYVKEIACGGRHSAVVTDA 307
                  GS        NS G+ G                 S V  IA G  H+  +T +
Sbjct: 580 YHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSGVTAIAAGNYHTCALTSS 639

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G +  +G+ L GQ G G+T ++  P   S L    V  IAAG  HT  ++  G V+ +G 
Sbjct: 640 GGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGDEHTCALTGSGGVWCWGD 698

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N +GQLG G     + P  +    L S     ++ G  H+  LT  G V+ WG N  GQL
Sbjct: 699 NYYGQLGDGTTTNRSTPGAVSG--LPSG-VTAIAAGVYHTCALTGSGGVMCWGNNGDGQL 755

Query: 428 GLGDSIDRNIP 438
           G G  + R  P
Sbjct: 756 GDGRPLYRTTP 766


>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
          Length = 531

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 128/253 (50%), Gaps = 30/253 (11%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +GD   T+ P  +    G KI  ++ G G H ++ ++ G+V+ WG+    QLG G+    
Sbjct: 61  TGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT---- 116

Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
             T H  +PC               Q S N   K     V E+ACG  HS V+T  G + 
Sbjct: 117 --TNHGFVPC---------------QVSTNLVNKK----VIEVACGSHHSMVLTSDGEVY 155

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
           T+G+   GQ G GST +Q  P   +S L +  V  IA G   ++ +   G VYV+G N  
Sbjct: 156 TWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGN 215

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           GQLG G   + N P       L+  R + V+CG  H+ VLT++GQ+ +WG N YGQLG G
Sbjct: 216 GQLGLG--SSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG 273

Query: 431 DSIDRNIPSLVPI 443
           +  +++ P+ V +
Sbjct: 274 NKSNQSYPTTVVV 286



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 32/222 (14%)

Query: 203 PCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-P 260
           PC V+ N    K+ +VA G  H+++L+  G+V+ WGY   GQ+G GS     P P  +  
Sbjct: 123 PCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-PIPRRVTS 181

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
           CL++                          V  IACG   S  V + G +  +G+   GQ
Sbjct: 182 CLQN------------------------KIVVNIACGQMCSMAVVENGEVYVWGYNGNGQ 217

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG++Y +G N +GQLGTG    
Sbjct: 218 LGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSN 277

Query: 381 ENVPKLLETPILESKRA-KVVSCGARH-SAVLTEDGQVLSWG 420
           ++ P    T +++  R  ++ +C + H SA  T+ GQV  WG
Sbjct: 278 QSYPT---TVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 316



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T+ G + T+G   Y Q G+G+TN    P   S+ L++ +V ++
Sbjct: 79  KKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEV 138

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G  H++ ++ +G VY +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 139 ACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRV-TSCLQNKIVVNIACGQMC 197

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  + E+G+V  WG+N  GQLGLG S ++  P  +  + G   + +ACG+ HTL+L +  
Sbjct: 198 SMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 257

Query: 466 QI 467
           QI
Sbjct: 258 QI 259



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 96/237 (40%), Gaps = 38/237 (16%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
           GT   +S I       LCG        G G    LAT E G++ TWG       S L +G
Sbjct: 60  GTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 115

Query: 90  KHGETPEPFPLPTE---ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
                  P  + T      V++ A G  H + +T  GEVYTWG             + ++
Sbjct: 116 TTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNS 162

Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP-------------- 192
           G     ST  Q  +P         +    +   +  S A  E+                 
Sbjct: 163 GQVGSGSTANQ-PIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 221

Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
           +SG++    +PC +    G+++ +VA G  HTL+L+D GQ++ WG    GQLG G++
Sbjct: 222 SSGNQ---PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 275



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 26/175 (14%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           VY WGY   G     S    PIP R+      K V    CG   ++A  E+G++  WG  
Sbjct: 154 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGY- 212

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
              G   L  G  G  P P  +       V + A G+AH + +T+ G++Y WG       
Sbjct: 213 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWG------- 263

Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
                    A S+ +  TG +S  + PT      D+           TS+A+ +S
Sbjct: 264 ---------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQS 309



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 5/103 (4%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTEDGQVLSWG 420
           V+V G N  G LGTG  Q+   P+ L++  L  K+   +S G+  H  + TE+G+V +WG
Sbjct: 48  VFVLGMNCSGCLGTGDMQSTIEPRRLDS--LCGKKIACLSYGSGPHVVLATEEGEVYTWG 105

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLL 461
            N Y QLG G +    +P  V  +    +   +ACG  H+++L
Sbjct: 106 HNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVL 148


>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
          Length = 628

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 122/260 (46%), Gaps = 35/260 (13%)

Query: 208 LNPGVKITKVAAGGRHTLILSDMG-QVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHA 265
           +N  +++  +A+G  H L +   G QV+ WG    GQLG G +  +  PTP  I      
Sbjct: 127 INMQLRVLAMASGDSHVLAIVHPGNQVYAWGCNRWGQLGTGDQTNRATPTPIAI------ 180

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                               A  +    ++CG +HS  +++ G L ++G G  G+ GHGS
Sbjct: 181 --------------------ATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGHGS 220

Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
               L P   S+L+  Q+  +A G+ H+    + G VY +G N++GQLG    +    P 
Sbjct: 221 EAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQLGNNTAKKHLSPN 280

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PI 443
            L    +E      V+CG  H+ +LT +G + S+G+N  GQLG+G   D   P  V  P 
Sbjct: 281 KLRD--MEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADSQQPKKVDLPE 338

Query: 444 HGFLPRNIACGWWHTLLLAE 463
           H     +I  G++HTL L  
Sbjct: 339 HAV---DIVSGYYHTLCLTN 355



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 115/251 (45%), Gaps = 30/251 (11%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           +GD+    +P  + +      T V+ G +H++ LS+ G+++ WG G  G+ G GS     
Sbjct: 166 TGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGHGSE---- 221

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
             P L P +  A  GK                     +  +A G  HSA     G++ T+
Sbjct: 222 -APSLSPQVVSALVGKQ--------------------ITSMAGGMLHSAATDLRGSVYTW 260

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           GW  YGQ G+ +    L P+    +    V ++  G  HT  ++ EG +Y FG N  GQL
Sbjct: 261 GWNKYGQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQL 320

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD-S 432
           G G       PK ++ P    + A  +  G  H+  LT  G V SWG+   G LGLGD +
Sbjct: 321 GVGGYADSQQPKKVDLP----EHAVDIVSGYYHTLCLTNKGNVYSWGYMSDGALGLGDIA 376

Query: 433 IDRNIPSLVPI 443
             ++ P L+P+
Sbjct: 377 GHQSKPKLIPL 387



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 115/297 (38%), Gaps = 47/297 (15%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEASVVK----AAA 111
           G   ++A S  G+L +WG          T G+ G   E P   P    A V K     A 
Sbjct: 192 GAQHSMALSNYGELYSWGCG--------TGGRTGHGSEAPSLSPQVVSALVGKQITSMAG 243

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
           G  H  +    G VYTWGW +          +G  G    ++T K+   P +        
Sbjct: 244 GMLHSAATDLRGSVYTWGWNK----------YGQLG----NNTAKKHLSPNKLRDMEKHH 289

Query: 172 AGEEVVKRRKTSSAREESENPASGDEF--------FTLSPCLVTLNPGVKITKVAAGGRH 223
             +    +  T     E    + G           +  S     ++       + +G  H
Sbjct: 290 VVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADSQQPKKVDLPEHAVDIVSGYYH 349

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           TL L++ G V+ WGY  +G LGLG        P LIP L H         +    S+  S
Sbjct: 350 TLCLTNKGNVYSWGYMSDGALGLGDIAGHQSKPKLIP-LSHIRHNYSDS-MDSYNSIYES 407

Query: 284 GKAGRS--YVK-----EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRP 332
           G  G +  Y K     +IA G  +SA++T +G L  FG+G   + G+G+ T DQ  P
Sbjct: 408 GGEGTNPRYAKGDVAEKIAAGAWNSAIITTSGKLYCFGFGDSYRIGNGTNTEDQDIP 464



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 2/105 (1%)

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG-QVLSW 419
           ++Y +G N FGQ  +       +P  +E  I    R   ++ G  H   +   G QV +W
Sbjct: 97  QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAW 156

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHG-FLPRNIACGWWHTLLLAE 463
           G N++GQLG GD  +R  P+ + I    +  +++CG  H++ L+ 
Sbjct: 157 GCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSN 201


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 135/290 (46%), Gaps = 29/290 (10%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIP 260
           +P  V L  G  IT +AAGG H+L L+D G V  WG    GQLG G+   +  P    +P
Sbjct: 80  TPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSNSRGQLGDGTTTDRSTPVTVGLP 139

Query: 261 C---LEHAASGKDRPL-LVRQGSV-----NSSGKAG------RSYVKEIA---------- 295
               +   A+G+   L L   G+V     NS+G+ G      RS    +           
Sbjct: 140 AGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTTTARSTPVTVGLPAGTTITAL 199

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
               +S  +TD GA L +G    GQ G G+T D+  P   S      +  +AA   H++ 
Sbjct: 200 AASTYSLALTDTGAALAWGSNSRGQLGDGTTTDRSTPVTVSLPAGTTITALAASYDHSLA 259

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++  G V  +G N  GQLG G     + P  +  P   +  A  ++ G  H+ VLT  G 
Sbjct: 260 LTDTGAVLAWGSNSNGQLGDGTTTNRSTPVTVGLPAGTTITA--LAAGRSHTLVLTSAGA 317

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAET 464
           VL+WG N  GQLG G + DR+ P  V +  G     +A G++H+L L +T
Sbjct: 318 VLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTDT 367



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 146/359 (40%), Gaps = 52/359 (14%)

Query: 93  ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
            TP    LP   ++   AAG +H +++T+ G V  WG          +   G  G    D
Sbjct: 79  STPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWG----------SNSRGQLG----D 124

Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE--------ESENPASGDEFFTL--S 202
            T    + P     P+          RR + +  +         + N   GD   T   +
Sbjct: 125 GTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTTTARST 184

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V L  G  IT +AA   ++L L+D G    WG    GQLG G+              
Sbjct: 185 PVTVGLPAGTTITALAAS-TYSLALTDTGAALAWGSNSRGQLGDGTTTD----------- 232

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                        R   V  S  AG + +  +A    HS  +TD GA+L +G    GQ G
Sbjct: 233 -------------RSTPVTVSLPAGTT-ITALAASYDHSLALTDTGAVLAWGSNSNGQLG 278

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            G+T ++  P          +  +AAG  HT+ ++  G V  +G N  GQLG G     +
Sbjct: 279 DGTTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRS 338

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            P  +  P   +  A  ++ G  HS  LT+ G VL+WG N YGQLG G + DR+ P  V
Sbjct: 339 TPVTVGLPAGTTITA--LAAGYYHSLALTDTGAVLAWGGNSYGQLGDGTTTDRSTPVTV 395



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 155/374 (41%), Gaps = 61/374 (16%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
           GT+  +S   +P+   L  G +   +  GG   +LA +++G ++ WGS +  GQ    + 
Sbjct: 73  GTTTARS---TPVTVGLPAGTTITALAAGGS-HSLALTDTGVVLAWGS-NSRGQLGDGTT 127

Query: 90  KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
               TP    LP   ++   AAG  H +++T+ G V  WG               S G  
Sbjct: 128 TDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSN-------------SNGQL 174

Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-----------GDEF 198
              +T  +S   T   P     AG  +     ++ +   ++  A+           GD  
Sbjct: 175 GDGTTTARSTPVTVGLP-----AGTTITALAASTYSLALTDTGAALAWGSNSRGQLGDGT 229

Query: 199 FT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
            T   +P  V+L  G  IT +AA   H+L L+D G V  WG    GQLG G+        
Sbjct: 230 TTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGTTTN----- 284

Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
                       +  P+ V        G    + +  +A G  H+ V+T AGA+L +G  
Sbjct: 285 ------------RSTPVTV--------GLPAGTTITALAAGRSHTLVLTSAGAVLAWGSN 324

Query: 317 LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
             GQ G G+T D+  P          +  +AAG +H++ ++  G V  +GGN +GQLG G
Sbjct: 325 SNGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLGDG 384

Query: 377 VDQAENVPKLLETP 390
                + P  +  P
Sbjct: 385 TTTDRSTPVTVGLP 398


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 128/253 (50%), Gaps = 30/253 (11%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +GD   T+ P  +    G KI  ++ G G H ++ ++ G+V+ WG+    QLG G+    
Sbjct: 56  TGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT---- 111

Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
             T H  +PC               Q S N   K     V E+ACG  HS V+T  G + 
Sbjct: 112 --TNHGFVPC---------------QVSTNLVNKK----VIEVACGSHHSMVLTSDGEVY 150

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
           T+G+   GQ G GST +Q  P   +S L +  V  IA G   ++ +   G VYV+G N  
Sbjct: 151 TWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGN 210

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           GQLG G   + N P       L+  R + V+CG  H+ VLT++GQ+ +WG N YGQLG G
Sbjct: 211 GQLGLG--SSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG 268

Query: 431 DSIDRNIPSLVPI 443
           +  +++ P+ V +
Sbjct: 269 NKSNQSYPTTVVV 281



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 32/222 (14%)

Query: 203 PCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-P 260
           PC V+ N    K+ +VA G  H+++L+  G+V+ WGY   GQ+G GS     P P  +  
Sbjct: 118 PCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-PIPRRVTS 176

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
           CL++                          V  IACG   S  V + G +  +G+   GQ
Sbjct: 177 CLQN------------------------KIVVNIACGQMCSMAVVENGEVYVWGYNGNGQ 212

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG++Y +G N +GQLGTG    
Sbjct: 213 LGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSN 272

Query: 381 ENVPKLLETPILESKRA-KVVSCGARH-SAVLTEDGQVLSWG 420
           ++ P    T +++  R  ++ +C + H SA  T+ GQV  WG
Sbjct: 273 QSYPT---TVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 311



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T+ G + T+G   Y Q G+G+TN    P   S+ L++ +V ++
Sbjct: 74  KKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEV 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G  H++ ++ +G VY +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 134 ACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRV-TSCLQNKIVVNIACGQMC 192

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  + E+G+V  WG+N  GQLGLG S ++  P  +  + G   + +ACG+ HTL+L +  
Sbjct: 193 SMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 252

Query: 466 QI 467
           QI
Sbjct: 253 QI 254



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 96/237 (40%), Gaps = 38/237 (16%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
           GT   +S I       LCG        G G    LAT E G++ TWG       S L +G
Sbjct: 55  GTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 110

Query: 90  --KHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
              HG  P           V++ A G  H + +T  GEVYTWG             + ++
Sbjct: 111 TTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNS 157

Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP-------------- 192
           G     ST  Q  +P         +    +   +  S A  E+                 
Sbjct: 158 GQVGSGSTANQ-PIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 216

Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
           +SG++    +PC +    G+++ +VA G  HTL+L+D GQ++ WG    GQLG G++
Sbjct: 217 SSGNQ---PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 270



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 26/175 (14%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           VY WGY   G     S    PIP R+      K V    CG   ++A  E+G++  WG  
Sbjct: 149 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
              G   L  G  G  P P  +       V + A G+AH + +T+ G++Y WG       
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWG------- 258

Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
                    A S+ +  TG +S  + PT      D+           TS+A+ +S
Sbjct: 259 ---------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQS 304



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTEDGQVLSWG 420
           V+V G N  G LGTG  Q+   P+ L++  L  K+   +S G+  H  + TE+G+V +WG
Sbjct: 43  VFVLGMNCSGCLGTGDMQSTIEPRRLDS--LCGKKIACLSYGSGPHVVLATEEGEVYTWG 100

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAETTQI 467
            N Y QLG G +    +P  V  +    +   +ACG  H+++L    ++
Sbjct: 101 HNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEV 149


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 122/254 (48%), Gaps = 33/254 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           IT+V+ G  HTL ++D GQV GWG    GQ GL +                 +  K +P 
Sbjct: 90  ITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTG---------------DSEDKRKPR 134

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL--- 330
            ++  S           V ++ACG  HS  +T  G +  +G   +GQ G G+    L   
Sbjct: 135 FLKSLS--------SCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRD 186

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P   SSL  + + ++A G WH+  +SV G V+ +G N  GQLG G  +    P  L+  
Sbjct: 187 HPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKN- 245

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN 450
            L++K+ K ++CG  ++A+LT  G +  +G    GQLG G   +   P    + GFL   
Sbjct: 246 -LKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPR--SVQGFLGSE 302

Query: 451 I---ACGWWHTLLL 461
           I   ACG  HTL+L
Sbjct: 303 ITQVACGRQHTLVL 316



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 37/239 (15%)

Query: 233 VWGWGYGGEGQLG---LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
           V+ WG   +GQLG   LG  +  + +P  +P L                       AG+ 
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPAL-----------------------AGKQ 39

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
            ++EI+CG RH+ V+   G ++  G    GQ G      +L  ++  +   + + Q++ G
Sbjct: 40  -IREISCGLRHTCVLLRDGTVMMCGANDRGQLGQDRPGSEL--AHVPATETLVITQVSCG 96

Query: 350 LWHTVCISVEGRVYVFGGNQFGQ--LGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
             HT+ ++  G+V  +G N  GQ  L TG  + +  P+ L++  L S +   V+CG+ HS
Sbjct: 97  NDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKS--LSSCQVAQVACGSMHS 154

Query: 408 AVLTEDGQVLSWGWNKYGQLGL---GDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLA 462
             LT DG++ +WG N +GQLG+   G ++ R+ P  L  + G   R +ACG WH+  L+
Sbjct: 155 MALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALS 213



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 154/368 (41%), Gaps = 85/368 (23%)

Query: 78  ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
           A+D GQ  L   + G      P      + + + G  H ++VT+ G+V  WG        
Sbjct: 64  ANDRGQ--LGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWG-------- 113

Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
               D G  G    DS               DKR      K R   S             
Sbjct: 114 --RNDRGQCGLSTGDS--------------EDKR------KPRFLKS------------- 138

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
              LS C        ++ +VA G  H++ L+  G+++ WG    GQLG+G          
Sbjct: 139 ---LSSC--------QVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIG---------- 177

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
                   A G+    L R      S   G   ++ +ACGG HS  ++ +GA+  FGWG 
Sbjct: 178 --------APGRT---LYRDHPQQLSSLPGVP-IRRLACGGWHSFALSVSGAV--FGWGK 223

Query: 318 Y--GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
              GQ G G+T D++ P+   +L   QV+ IA G  +T  ++  G +++FG    GQLG 
Sbjct: 224 NNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGH 283

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT-EDGQVLSWGWNKYGQLGLGDSID 434
           G    E  P+ ++   L S+  + V+CG +H+ VL    G+  S G    GQLGL +   
Sbjct: 284 GSHSNEVNPRSVQG-FLGSEITQ-VACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSS 341

Query: 435 RNIPSLVP 442
           ++  S VP
Sbjct: 342 KSCASPVP 349



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 104/253 (41%), Gaps = 38/253 (15%)

Query: 211 GVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLG-----SRIKMVPTPHLIPCLEH 264
           G +IT+VA G +HTL+L    G+ +  G G +GQLGL      S    VP P   P    
Sbjct: 300 GSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTE 359

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV----TDAGALLTFGWGLYGQ 320
             S               +G+  RS +  I  GG  S  +     D    L F   +   
Sbjct: 360 GCS---------------NGEESRSIIGSIFAGGDQSFCIVSRGNDPDHPLDFREAIPSI 404

Query: 321 CGHGSTNDQLRP-SYASSLMDIQ--VEQIAAGLWHTVCISVE-------GRVYVFGGNQF 370
                T D L+  S +S L++    V+ +   L    C++         G +++FG    
Sbjct: 405 EPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSSPACLNASFLVGAGSGGLFLFGQGSE 464

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT-EDGQVLSWGWNKYGQLGL 429
           GQLG G    E  P+ ++  +        V+CG +H+ VL    G   S G    GQLGL
Sbjct: 465 GQLGHGSHSNEVNPRSVKDFL--GNEITQVACGRQHTLVLEGRTGGFYSLGQGSKGQLGL 522

Query: 430 GDSIDRNIPSLVP 442
            +   ++  SLVP
Sbjct: 523 DNGSSKSCASLVP 535


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
           musculus]
          Length = 4902

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 28/272 (10%)

Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P +
Sbjct: 551 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 609

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I                       SGK    +V  IACG  +SA +T  G L T+G G Y
Sbjct: 610 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 649

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG G
Sbjct: 650 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 709

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G      
Sbjct: 710 GSDGCKTPKLIEK--LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 767

Query: 437 IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P L+  + G    ++A G  H L L E +++
Sbjct: 768 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 799



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----- 265
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L        
Sbjct: 3058 ALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKV 3117

Query: 266  ---ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 3118 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3177

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 3178 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3237

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3238 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3295

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + ++ Q+
Sbjct: 3296 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3345



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3114 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3156

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3157 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3208

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3209 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3268

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3269 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3326

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3327 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3386

Query: 457  HTL 459
            H++
Sbjct: 3387 HSV 3389



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4095 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4154

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4155 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4214

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4274

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4275 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4332

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4333 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4382



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4169

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4170 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4213

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4214 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4256

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4257 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4308

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4309 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4366

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4367 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4401



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+ + G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 3065 AGGSKSLFAVTVEGKVYSCGEA--------TNGRLGLGMSSGTVPIPRQITALSSYVVKK 3116

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H  ++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3117 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3166

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3167 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3226

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3227 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3268

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHGS     +P     L
Sbjct: 3269 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3321

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3322 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3379

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3380 RVACGSSHSVAWT 3392



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4071

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4072 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4131

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4132 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4191

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4192 GHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4249

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4283



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 3027 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 3060

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G + + G    G+ G G ++  +  P   ++L    V+++A 
Sbjct: 3061 -VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3119

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3120 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3177

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA LT  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3178 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3237

Query: 466  Q 466
            +
Sbjct: 3238 E 3238



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 663 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 721

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 722 KLQDLD------------------------VIKVRCGSQFSIALTKDGQVYSWGKGDNQR 757

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 758 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 817

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L+SK    ++CG   S
Sbjct: 818 KPEPTAL--PGLDSKHIVGIACGPAQS 842



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4273 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4331

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4332 CTEDGEVYTWG 4342



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 727 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 785

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 786 GSTHCLALTEDSEVHSWG 803



 Score = 42.4 bits (98), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 585 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 641

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 642 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 692

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 693 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 742

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 743 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 802

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 803 GSNDQCQHFDTLRVTK-PEPTALPGLD 828



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4120 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4171

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4172 ACVTAAGDLYTWG 4184


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 132/269 (49%), Gaps = 33/269 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   ++ P  +    G KIT ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 57  GDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGT----- 111

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
               L+PC               Q S N   K     V E+ACG  HS ++T  G + T+
Sbjct: 112 TNNSLLPC---------------QISTNLVNKK----VTEVACGSHHSMILTSDGEVYTW 152

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVE-QIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G GST +Q  P   +S +  ++   IA G   ++ +   G VYV+G N  GQ
Sbjct: 153 GYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQ 212

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G   + N P       L+  R + V+CG  H+ VLT++GQ+ +WG N YGQLG G+ 
Sbjct: 213 LGLG--NSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNR 270

Query: 433 IDRNIPSLVPIHGFLPRNI---ACGWWHT 458
            +++ P  VPI     R I   AC   HT
Sbjct: 271 SNQSYP--VPITVDKDRVIEIAACHSAHT 297



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 108/182 (59%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQI 346
           K+I C     G H  V T  G + T+G   Y Q G+G+TN+ L P   +++L++ +V ++
Sbjct: 74  KKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEV 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G  H++ ++ +G VY +G N  GQ+G+G    + +P+ + T  L++K A  ++CG   
Sbjct: 134 ACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRV-TSCLQNKIAVNIACGQMC 192

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  + E+G+V  WG+N  GQLGLG+S ++  P  +  + G   + +ACG+ HTL+L +  
Sbjct: 193 SMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 252

Query: 466 QI 467
           Q+
Sbjct: 253 QM 254



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 28/223 (12%)

Query: 200 TLSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           +L PC ++ N    K+T+VA G  H++IL+  G+V+ WGY   GQ+G GS         +
Sbjct: 115 SLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRV 174

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++  +            VN            IACG   S  V + G +  +G+   
Sbjct: 175 TSCLQNKIA------------VN------------IACGQMCSMAVVENGEVYVWGYNGN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG++Y +G N +GQLGTG  
Sbjct: 211 GQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNR 270

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P  +   + + +  ++ +C + H SA  T+  QV  WG
Sbjct: 271 SNQSYP--VPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWG 311



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 32/218 (14%)

Query: 46  LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-- 103
           LCG        G G    +AT+E G++ TWG       S L +G    +  P  + T   
Sbjct: 71  LCGKKITCLSYGSGPHVVVATAE-GEVYTWGH---NAYSQLGNGTTNNSLLPCQISTNLV 126

Query: 104 -ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
              V + A G  H + +T  GEVYTWG             + ++G     ST  Q A+P 
Sbjct: 127 NKKVTEVACGSHHSMILTSDGEVYTWG-------------YNNSGQVGSGSTANQ-AIPR 172

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPG 211
                   +    +   +  S A  E+                G+     +PC +    G
Sbjct: 173 RVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQG 232

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
           +++ +VA G  HTL+L+D GQ++ WG    GQLG G+R
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNR 270



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTEDG 414
           ++    V+  G N  G LG G  Q    P+ L+T  L  K+   +S G+  H  V T +G
Sbjct: 37  VTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDT--LCGKKITCLSYGSGPHVVVATAEG 94

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAETTQI 467
           +V +WG N Y QLG G + +  +P  +  +    +   +ACG  H+++L    ++
Sbjct: 95  EVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEV 149



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           VY WGY   G     S     IP R+      K      CG   ++A  E+G++  WG  
Sbjct: 149 VYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G++Y WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWG 258


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
           musculus]
          Length = 4841

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 28/272 (10%)

Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P +
Sbjct: 488 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 546

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I                       SGK    +V  IACG  +SA +T  G L T+G G Y
Sbjct: 547 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 586

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG G
Sbjct: 587 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 646

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G      
Sbjct: 647 GSDGCKTPKLIEK--LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 704

Query: 437 IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P L+  + G    ++A G  H L L E +++
Sbjct: 705 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 736



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----- 265
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L        
Sbjct: 2997 ALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKV 3056

Query: 266  ---ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 3057 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3116

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 3117 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3176

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3177 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3234

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + ++ Q+
Sbjct: 3235 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3284



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3053 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3095

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3096 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3147

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3148 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3207

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3208 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3265

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3266 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3325

Query: 457  HTL 459
            H++
Sbjct: 3326 HSV 3328



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4034 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4093

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4094 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4153

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4154 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4213

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4214 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4271

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4272 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4321



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4049 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4108

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4109 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4152

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4153 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4195

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4196 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4247

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4248 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4305

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4306 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4340



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 149/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+ + G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 3004 AGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSS--GTVPIPRQITALSSYVVKKVAVHSG 3061

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3062 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3111

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3112 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3171

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3172 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3212

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3213 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3266

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3267 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3324

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3325 SHSVAWT 3331



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4010

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4011 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4070

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4071 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4130

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4131 GHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4188

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4189 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4222



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2966 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2999

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G + + G    G+ G G ++  +  P   ++L    V+++A 
Sbjct: 3000 -VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3058

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3059 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3116

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA LT  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3117 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3176

Query: 466  Q 466
            +
Sbjct: 3177 E 3177



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 600 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 658

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 659 KLQDLD------------------------VIKVRCGSQFSIALTKDGQVYSWGKGDNQR 694

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 695 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 754

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L+SK    ++CG   S
Sbjct: 755 KPEPTAL--PGLDSKHIVGIACGPAQS 779



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4212 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4270

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4271 CTEDGEVYTWG 4281



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 664 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 722

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 723 GSTHCLALTEDSEVHSWG 740



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 522 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 578

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 579 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 629

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 630 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 679

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 680 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 739

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 740 GSNDQCQHFDTLRVTK-PEPTALPGLD 765



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 4048 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 4099

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   VT AG++YTWG
Sbjct: 4100 VVDVAAGGAHSACVTAAGDLYTWG 4123


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 98/176 (55%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGGRH+A+VT  G + ++G    G+ GHG  +D L P    SL +I +E +A G 
Sbjct: 306 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGE 365

Query: 351 WHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G     FG LG G + +  VPK +  P LE      +SCG  H+A
Sbjct: 366 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 424

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           V+T  GQ+ ++G   +G LG GD    +IP  V  + G      ACG WHT  + E
Sbjct: 425 VVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 480



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 125/258 (48%), Gaps = 42/258 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R K V  P  +  L+       
Sbjct: 410 GIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLK------- 461

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G L T+G G  
Sbjct: 462 ----------------GLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 504

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 505 GRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN--P 562

Query: 379 QAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           QA+  +P  +E  + +S   + ++CGA H AVLT   +V +WG    G+LG GD+ DRN 
Sbjct: 563 QADGKLPNRVEGRLSKS-FVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNF 621

Query: 438 PSLV-PIHGFLPRNIACG 454
           PSLV  +     ++IACG
Sbjct: 622 PSLVEALKDKQVKSIACG 639



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           G G   D L P    S + + V+ IA G  H   ++ +G V+ +G    G+LG GVD   
Sbjct: 285 GFGVKLDSLLPKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV 344

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPS 439
             PKL+++  L +   ++V+CG  H+  +T  G + +WG   Y  G LG G+ +   +P 
Sbjct: 345 LHPKLIDS--LSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 402

Query: 440 LV--PIHGFLPRNIACGWWHTLLLAETTQI 467
            V  P+ G    +I+CG WHT ++  + Q+
Sbjct: 403 RVNGPLEGIHVSSISCGPWHTAVVTSSGQL 432



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 158/384 (41%), Gaps = 70/384 (18%)

Query: 53  KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAA 110
           +++  GG   AL T + G++ +WG   +E    L  G   +   P  + +    ++   A
Sbjct: 307 QNIACGGRHAALVTKQ-GEVFSWG---EESGGRLGHGVDSDVLHPKLIDSLSNINIELVA 362

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS--TGKQSALPTEQAPPS 168
            G  H  +VT +G++YTWG          T +FG  G   + S    K+   P E    S
Sbjct: 363 CGEYHTCAVTLSGDLYTWG--------DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 414

Query: 169 DKRAG---EEVVKRRKTSSAREESENPAS------GDEFFTLSPCLVTLNPGVKITKVAA 219
               G     VV    TSS +  +    +      GD      P  V    G++  + A 
Sbjct: 415 SISCGPWHTAVV----TSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 470

Query: 220 GGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAA 266
           G  HT  + ++            G+++ WG G +G+LG G +  K+VPT     C+    
Sbjct: 471 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT-----CV---- 521

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
                  LV                 ++ACG   +  +T +G + T G  +YGQ G+   
Sbjct: 522 -----AALVEPNFC------------QVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA 564

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
           + +L       L    VE+IA G +H   ++ +  VY +G    G+LG G     N P L
Sbjct: 565 DGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSL 624

Query: 387 LETPILESKRAKVVSCGARHSAVL 410
           +E   L+ K+ K ++CG   +A +
Sbjct: 625 VEA--LKDKQVKSIACGTNFTAAI 646


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R  +                 D+
Sbjct: 819  VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 861

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV               ++++ACG  HSA ++  G L T+G G YG+ GHG    QL+
Sbjct: 862  PRLVEALRAKK--------IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 913

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++L   +V Q+A G     T+ ++ +G V+ +G   FG+LG G  +  + P  +E 
Sbjct: 914  PKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIER 973

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L       + CGA+ S  LT  G+V +WG   Y +LG G   D+++    PI G   R
Sbjct: 974  --LSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLRGR 1029

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + +  Q+
Sbjct: 1030 RVIHVAVGALHCLAVTDAGQV 1050



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 134/309 (43%), Gaps = 79/309 (25%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R+                   DR
Sbjct: 1884 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 1926

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV   +  S        V +IACG  HSA +T +G +LT+G G YG+ GHG + DQLR
Sbjct: 1927 PKLVEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 1978

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 1979 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 2038

Query: 390  --------------------------------------------------PILESKRAKV 399
                                                                L+ K+   
Sbjct: 2039 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 2098

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            ++ G+ H    ++ G+V +WG N  GQLG G       P LV  + G     + CG  HT
Sbjct: 2099 IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHT 2158

Query: 459  LLLAETTQI 467
            L L+ T+Q+
Sbjct: 2159 LALS-TSQL 2166



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 32/271 (11%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T S  +  L P      +A G +   I+S  G+V+  G G  G+LGLG     VP PH +
Sbjct: 757 TFSQTISRLRP----IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQL 811

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
           P L           +V++ +V+S              GG+H+  +T  G + ++G G  G
Sbjct: 812 PVLHQ--------YVVKKVAVHS--------------GGKHALALTLDGKVFSWGEGEDG 849

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG+     +P    +L   ++  +A G  H+  IS +G +Y +G  ++G+LG G + 
Sbjct: 850 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 909

Query: 380 AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
            +  PKL+    L  +R   V+CG+R   +  LTEDG V SWG   +G+LG G S   + 
Sbjct: 910 TQLKPKLVTA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT 967

Query: 438 PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           P  +  + G     I CG   +L L    ++
Sbjct: 968 PHEIERLSGIGVVQIECGAQFSLALTRAGEV 998



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 34/227 (14%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            ++GWG+   GQLG   GSRIK  PT    PC    A    RP+                 
Sbjct: 1799 IYGWGHNHRGQLGGLEGSRIK-TPT----PC---EALSLLRPV----------------- 1833

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--A 348
              ++A G +    VT  G L   G+G  G+ G G ++    P+   SL  + V+++A  +
Sbjct: 1834 --QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNS 1891

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G  H + ++ EG VY +G  + G+LG G   + + PKL+E   L       ++CG+ HSA
Sbjct: 1892 GGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH--LNGMSVADIACGSAHSA 1949

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
             +T  G VL+WG  +YG+LG GDS D+  P LV  + G+   +IACG
Sbjct: 1950 AITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 1996



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 126/308 (40%), Gaps = 35/308 (11%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQA 165
            V   +G  HC+++T  GEVY WG  E        R         +   G   A +    A
Sbjct: 1887 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA 1946

Query: 166  PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGRH 223
              +   A   V+   K    R        GD    L P LV    G +   +A  +G   
Sbjct: 1947 HSAAITASGHVLTWGKGRYGRL-----GHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQ 2001

Query: 224  TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
            TL ++D   VW WG G  G+LG G        P+ I  L                     
Sbjct: 2002 TLCITDDDNVWSWGDGDYGKLGRGGS-DGCKLPYKIESL--------------------- 2039

Query: 284  GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              AG   VK + CG + S  +T +GA+ T+G G + + GHGS +   RP   ++L   ++
Sbjct: 2040 --AGLGVVK-VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 2096

Query: 344  EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
              IA G  H V  S  G VY +G N  GQLG G   A   P+L+    L+ K    V+CG
Sbjct: 2097 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCG 2154

Query: 404  ARHSAVLT 411
            + H+  L+
Sbjct: 2155 SAHTLALS 2162



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 147/367 (40%), Gaps = 60/367 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
             GG       S+ GK+   G   +     L  G     P P  LP     VVK  A   G
Sbjct: 771  AGGSKSLFIVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 827

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H +++T  G+V++WG  E           G  G   + +  K   +   +A    K+ 
Sbjct: 828  GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 873

Query: 173  GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
             +       +++   + E              GD    L P LVT   G ++ +VA G R
Sbjct: 874  RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSR 933

Query: 223  --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
               TL L++ G V+ WG G  G+LG G                  + G D P  + +  +
Sbjct: 934  DAQTLALTEDGAVFSWGDGDFGKLGRG-----------------GSEGSDTPHEIER--L 974

Query: 281  NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
            +  G      V +I CG + S  +T AG + T+G G Y + GHG      +P     L  
Sbjct: 975  SGIG------VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRG 1028

Query: 341  IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
             +V  +A G  H + ++  G+VY +G N  GQ G+G       P L+    L++     V
Sbjct: 1029 RRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG--LDAVFVNRV 1086

Query: 401  SCGARHS 407
            +CG+ HS
Sbjct: 1087 ACGSSHS 1093



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P+++ ++  ++   IA G      +S +G+VY  G    G+LG GV    NVP   + P+
Sbjct: 756 PTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPV 813

Query: 392 LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
           L     K V+   G +H+  LT DG+V SWG  + G+LG G+    + P LV  +     
Sbjct: 814 LHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKI 873

Query: 449 RNIACGWWHT 458
           R++ACG  H+
Sbjct: 874 RDVACGSSHS 883



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 66/222 (29%)

Query: 46   LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
            L G  +    CG G    L  ++   + +WG  D     Y   G+ G      P   E+ 
Sbjct: 1985 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 2039

Query: 105  ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
                VVK   G    V++T++G VYTWG                 G F +   G      
Sbjct: 2040 AGLGVVKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHGSV---- 2079

Query: 162  TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
                         + V+R K  +A +                       G KI  +A G 
Sbjct: 2080 -------------DHVRRPKKVAALQ-----------------------GKKIISIATGS 2103

Query: 222  RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             H +  SD G+V+ WG   EGQLG G+ +  +  P L+  L+
Sbjct: 2104 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 2144


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 28/272 (10%)

Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 541

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I                       SGK    +V  IACG  +SA +T  G L T+G G Y
Sbjct: 542 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G      
Sbjct: 642 GSDGCKTPKLIEK--LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 437 IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P L+  + G    ++A G  H L L E +++
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----- 265
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L        
Sbjct: 2992 ALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKV 3051

Query: 266  ---ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 3052 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3229

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + ++ Q+
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3142

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3203 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3260

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3261 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 457  HTL 459
            H++
Sbjct: 3321 HSV 3323



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4266

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4267 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4103

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4104 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4147

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4148 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4190

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4191 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4242

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4243 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4300

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4301 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4335



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+ + G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEA--------TNGRLGLGMSSGTVPIPRQITALSSYVVKK 3050

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H  ++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3051 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3100

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3101 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3161 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3202

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHGS     +P     L
Sbjct: 3203 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3255

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3256 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3313

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3314 RVACGSSHSVAWT 3326



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4005

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4006 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4065

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4066 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4126 GHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2994

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G + + G    G+ G G ++  +  P   ++L    V+++A 
Sbjct: 2995 -VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3111

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA LT  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 466  Q 466
            +
Sbjct: 3172 E 3172



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L+SK    ++CG   S
Sbjct: 750 KPEPTAL--PGLDSKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPTALPGLD 760



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4054 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4106 ACVTAAGDLYTWG 4118


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
           norvegicus]
          Length = 4779

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 28/272 (10%)

Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P +
Sbjct: 428 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 486

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I                       SGK    +V  IACG  +SA +T  G L T+G G Y
Sbjct: 487 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 526

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG G
Sbjct: 527 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 586

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G      
Sbjct: 587 GSDGCKTPKLIEK--LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 644

Query: 437 IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P L+  + G    ++A G  H L L E +++
Sbjct: 645 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 676



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------ 264
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L        
Sbjct: 2935 ALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKV 2994

Query: 265  --AASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 2995 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3054

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 3055 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3114

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3115 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3172

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + ++ Q+
Sbjct: 3173 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3222



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 2991 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3033

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3034 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3085

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3086 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3145

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3146 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3203

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3204 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3263

Query: 457  HTL 459
            H++
Sbjct: 3264 HSV 3266



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 3972 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4031

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4032 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4091

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4092 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4151

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4152 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4209

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4210 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4259



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 3987 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4046

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4047 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4090

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4091 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4133

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4134 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4185

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4186 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4243

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4244 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4278



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+ + G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 2942 AGGSKSLFAVTVEGKVYSCGEA--------TNGRLGLGMSSGTVPIPRQITALSSYVVKK 2993

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H  ++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 2994 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3043

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3044 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3103

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 3104 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3145

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHGS     +P     L
Sbjct: 3146 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3198

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3199 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3256

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3257 RVACGSSHSVAWT 3269



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 3948

Query: 284  GK----------------------------AGRSYVKEIAC--GGRHSAVVTDAGALLTF 313
            GK                                ++K++A   GG+H   ++  G + ++
Sbjct: 3949 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4008

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4009 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4068

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4069 GHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4126

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4127 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4160



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2937

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G + + G    G+ G G ++  +  P   ++L    V+++A 
Sbjct: 2938 -VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 2996

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 2997 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3054

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA LT  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3055 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3114

Query: 466  Q 466
            +
Sbjct: 3115 E 3115



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 130/328 (39%), Gaps = 73/328 (22%)

Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           ++VK AA     H +++   GEVY+WG              G  G       G    +P 
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 481

Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
           E+    +  S K+AG+ VV      T SA   +E               + +S DE    
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 539

Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI
Sbjct: 540 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 597

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             L+                           V ++ CG + S  +T  G + ++G G   
Sbjct: 598 EKLQDLD------------------------VIKVRCGSQFSIALTKDGQVYSWGKGDNQ 633

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +  
Sbjct: 634 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRV 693

Query: 380 AENVPKLLETPILESKRAKVVSCGARHS 407
            +  P  L  P L++K    ++CG   S
Sbjct: 694 TKPEPTAL--PGLDTKHIVGIACGPAQS 719



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4150 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4208

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4209 CTEDGEVYTWG 4219



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 662

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 663 GSTHCLALTEDSEVHSWG 680



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 462 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 518

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 519 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 569

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 570 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 619

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 620 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 679

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 680 GSNDQCQHFDTLRVTK-PEPTALPGLD 705



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 3986 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 4037

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   VT AG++YTWG
Sbjct: 4038 VVDVAAGGAHSACVTAAGDLYTWG 4061


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 128/272 (47%), Gaps = 30/272 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G +  T  P L+       I +++ G RH+L LSD GQV  WG    GQLG  +  ++V 
Sbjct: 73  GHDLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQ 132

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P ++           R L+ +              V +IACG  HS  +T  G L ++G
Sbjct: 133 LPKVV-----------RQLVSKT-------------VVQIACGNNHSLALTSCGELYSWG 168

Query: 315 WGLYGQCGHGSTNDQLRPSY---ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
             +YGQ G  S ND    +Y    ++L+ I +  IA G  H+  IS  G V+ +G N  G
Sbjct: 169 SNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCG 228

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG   +     P  L+T  L +   + V+CG   S  LT +G V + G   YGQLG G 
Sbjct: 229 QLGLNDETNRAYPTQLKT--LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF 286

Query: 432 SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
           S +  +P +V  + G     +ACG  HTL L 
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 109/239 (45%), Gaps = 34/239 (14%)

Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           +++ WG    GQLGLG    + + TP  IP     A                        
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTA------------------------ 41

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+++ACG RH+  +T  G +   G   Y Q GH       RP     L D  + QI+ G 
Sbjct: 42  VQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPQLIPELQDYVIIQISCGS 99

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+V  +G N  GQLG   + +   +PK++    L SK    ++CG  HS  
Sbjct: 100 RHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQ--LVSKTVVQIACGNNHSLA 157

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR---NIP-SLVPIHGFLPRNIACGWWHTLLLAET 464
           LT  G++ SWG N YGQLG+    D    N P  L  + G     IACG  H+ L++++
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 142/346 (41%), Gaps = 53/346 (15%)

Query: 59  GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG    L  + +GK+   GS D    S L      + P+  P   +  +++ + G  H 
Sbjct: 46  ACGHRHTLFLTATGKVYACGSND---YSQLGHDLPTKRPQLIPELQDYVIIQISCGSRHS 102

Query: 117 VSVTEAGEVYTWGWREC-----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           +++++ G+V +WG  +C           V   KV R   S    Q       S   T   
Sbjct: 103 LALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCG 162

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
                  G  +  +   +S  + +             P  +T   G+ +  +A GG H+ 
Sbjct: 163 ELYS--WGSNIYGQLGVNSPNDLTHCNY---------PLRLTTLLGIPLAAIACGGNHSF 211

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           ++S  G V+GWG    GQLGL                       +R    +  ++ + G 
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDE-------------------TNRAYPTQLKTLRTLG- 251

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
                V+ +ACG   S  +T+ G + T G G YGQ GHG +++++ P     LM   + Q
Sbjct: 252 -----VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQ 306

Query: 346 IAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
           +A G  HT+  +   G+VY FG    GQLGT   ++  +P+++  P
Sbjct: 307 VACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +Y +G    GQLG G  + E +    + P       + V+CG RH+  LT  G+V + G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66

Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           N Y QLG      R  P L+P +  ++   I+CG  H+L L++  Q+
Sbjct: 67  NDYSQLGHDLPTKR--PQLIPELQDYVIIQISCGSRHSLALSDWGQV 111


>gi|290983154|ref|XP_002674294.1| predicted protein [Naegleria gruberi]
 gi|284087883|gb|EFC41550.1| predicted protein [Naegleria gruberi]
          Length = 526

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 40/272 (14%)

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP-CLEHA 265
            L+    I K+ +G  HTLIL+   +++  G   + QL + S +      H++  CLE  
Sbjct: 138 VLDIDENIEKIESGSWHTLILTSKNRIFAIGKNADSQLNISSTVHSTVYKHILKFCLEDL 197

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                                    +K+IACG R+S ++T  G +   G+ +YGQ G  +
Sbjct: 198 E------------------------IKDIACGKRNSMILTKDGQVYGVGYNIYGQIGCVN 233

Query: 326 TNDQLRPSY------ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV-D 378
             + L   Y      + + +D +V+ +A G +HT+ I+   +VY F G  +G +   +  
Sbjct: 234 DENYLGEDYCRVNTLSKTRIDEKVKLLACGSYHTIMITRTNKVY-FCGEMYGDVDIKIPS 292

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           +     +L+E+    +      SCG  HS  LT+ GQV + G N YGQLGL D   R+  
Sbjct: 293 RLTFFDELVES----NDYVIFASCGELHSVFLTKLGQVFACGRNSYGQLGLQDFKSRSDI 348

Query: 439 SLVPIHGFLPRN---IACGWWHTLLLAETTQI 467
           +L+    F  ++   IACGW HTL L    Q+
Sbjct: 349 TLIDKKHFSNQSISMIACGWNHTLFLTRNNQL 380



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 11/150 (7%)

Query: 328 DQLRPSYASSLMDI--QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
           D    S  S+++DI   +E+I +G WHT+ ++ + R++  G N   QL         V K
Sbjct: 128 DHQVKSIKSTVLDIDENIEKIESGSWHTLILTSKNRIFAIGKNADSQLNISSTVHSTVYK 187

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG-------LGDSIDR-NI 437
            +    LE    K ++CG R+S +LT+DGQV   G+N YGQ+G       LG+   R N 
Sbjct: 188 HILKFCLEDLEIKDIACGKRNSMILTKDGQVYGVGYNIYGQIGCVNDENYLGEDYCRVNT 247

Query: 438 PSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
            S   I   + + +ACG +HT+++  T ++
Sbjct: 248 LSKTRIDEKV-KLLACGSYHTIMITRTNKV 276



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 41/215 (19%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG-------LGS---RIKMVPTPHLIPC 261
           ++I  +A G R+++IL+  GQV+G GY   GQ+G       LG    R+  +    +   
Sbjct: 197 LEIKDIACGKRNSMILTKDGQVYGVGYNIYGQIGCVNDENYLGEDYCRVNTLSKTRIDEK 256

Query: 262 LEHAASGKDRPLLV-RQGSVNSSGKA--------------------GRSYVKEIACGGRH 300
           ++  A G    +++ R   V   G+                        YV   +CG  H
Sbjct: 257 VKLLACGSYHTIMITRTNKVYFCGEMYGDVDIKIPSRLTFFDELVESNDYVIFASCGELH 316

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ------VEQIAAGLWHTV 354
           S  +T  G +   G   YGQ G        +     +L+D +      +  IA G  HT+
Sbjct: 317 SVFLTKLGQVFACGRNSYGQLGL----QDFKSRSDITLIDKKHFSNQSISMIACGWNHTL 372

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            ++   ++Y  G N+ GQLG G     N+P  + T
Sbjct: 373 FLTRNNQLYCSGRNKHGQLGLGDYSDRNMPTRINT 407



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 24/150 (16%)

Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
           + G  H++ L+ +GQV+  G    GQLGL                +   S  D  L+ ++
Sbjct: 311 SCGELHSVFLTKLGQVFACGRNSYGQLGL----------------QDFKSRSDITLIDKK 354

Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
              N S       +  IACG  H+  +T    L   G   +GQ G G  +D+  P+  ++
Sbjct: 355 HFSNQS-------ISMIACGWNHTLFLTRNNQLYCSGRNKHGQLGLGDYSDRNMPTRINT 407

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           + ++ +  I AG   +V  + +G  Y+ G 
Sbjct: 408 VNEL-ITSIHAGRACSVFGTKKGHFYITGS 436


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  116 bits (290), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 37/258 (14%)

Query: 213  KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDR 271
            K  KV+ G  H  +++D G+++ WG    GQLG G  + K +  P  +            
Sbjct: 1123 KAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFR-------- 1174

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQL 330
                           G+S +  + CGG H+  V     + ++G   +GQ GHG+   +Q 
Sbjct: 1175 ---------------GKSPIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQS 1219

Query: 331  RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            RP     L   +++ IAAG  H + +   G ++ FG   FGQLGTG   ++N+P  +E  
Sbjct: 1220 RPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEIN 1279

Query: 391  IL-------ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI--PSLV 441
             +       +  +   ++CG  HS + +E+G+V SWG  K GQ  LG  +  NI  P L+
Sbjct: 1280 AIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQ--LGHKVFENISKPRLI 1337

Query: 442  PIHGFLPRNIACGWWHTL 459
                 + + I+CG +HT+
Sbjct: 1338 ETLRGVTK-ISCGHFHTV 1354



 Score =  110 bits (274), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 103/395 (26%), Positives = 169/395 (42%), Gaps = 71/395 (17%)

Query: 99   PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD-STGKQ 157
            PL  E   +K + GW H   +T+ GE+YTWG       +  +   G      K  S  K+
Sbjct: 1117 PLKNEKKAIKVSCGWDHIAVITDDGELYTWG-------SNQSGQLGHGLEVNKTLSLPKR 1169

Query: 158  SALPTEQAPPSDKRAGEEVVKRRKT-----SSAREESENPASGDEFFTLS-PCLVTLNPG 211
                  ++P      G E      +     S   ++      G +    S P ++    G
Sbjct: 1170 VDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTG 1229

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPT----PHLIPCLEHAA 266
             KI  +AAG  H ++L   G+++ +GYG  GQLG GS   K +PT      ++  L+H  
Sbjct: 1230 QKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHD 1289

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
             GK                     + +IACG  HS + ++ G + ++G G  GQ GH   
Sbjct: 1290 GGK---------------------ITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVF 1328

Query: 327  NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
             +  +P    +L    V +I+ G +HTV  +    VY +G  +  +LG   D+ E+VPK+
Sbjct: 1329 ENISKPRLIETLRG--VTKISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKV 1386

Query: 387  LETPILESKRAKVVSCGARHSAVLT------------EDGQ---------VLSWGWNKYG 425
            ++  I   K    V CG  H+  +T            ED +         + +WG  ++G
Sbjct: 1387 VDFFI--QKNVSKVVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHG 1444

Query: 426  QLGLGDSI-----DRNIPSLVP-IHGFLPRNIACG 454
            +LGLG  +     D+ IP+ +  ++     +I+CG
Sbjct: 1445 KLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDISCG 1479



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 102/432 (23%), Positives = 174/432 (40%), Gaps = 115/432 (26%)

Query: 40   SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPF 98
            SPI    CGG+             +A   +  + +WGS D  GQ  + T   +   P+  
Sbjct: 1177 SPIFMVECGGEH-----------TIAVDSNYFVYSWGS-DKFGQLGHGTKAVNQSRPKVI 1224

Query: 99   PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGK 156
               T   +   AAG+AH + + ++GE++++G+           DFG    GSF   +   
Sbjct: 1225 EELTGQKIQAIAAGFAHNIVLKKSGELFSFGYG----------DFGQLGTGSFHSKN--- 1271

Query: 157  QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
               +PT                       R E      G          +  + G KIT+
Sbjct: 1272 ---IPT-----------------------RIEINAIMGG----------LQHHDGGKITQ 1295

Query: 217  VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
            +A G  H++I S+ G+V+ WG G +GQLG     + +  P LI  L              
Sbjct: 1296 IACGFGHSVICSENGEVYSWGLGKQGQLG-HKVFENISKPRLIETLRG------------ 1342

Query: 277  QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                          V +I+CG  H+   TD   + ++G G + + GH S  D+  P    
Sbjct: 1343 --------------VTKISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVD 1388

Query: 337  SLMDIQVEQIAAGLWHTVCIS-----------------VEGR----VYVFGGNQFGQLGT 375
              +   V ++  G  HT+ I+                 + G+    +Y +G  + G+LG 
Sbjct: 1389 FFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGL 1448

Query: 376  GVD-QAENVPKLLETPI--LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
            G D ++    K + T I  + S     +SCG+  SA++T +  +  WG  ++GQ+G G +
Sbjct: 1449 GGDLKSPFFDKPIPTAIKGVNSLNLIDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKN 1508

Query: 433  IDRNIPSLVPIH 444
             D  +P+ + ++
Sbjct: 1509 DDVWVPTRISLN 1520



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 16/189 (8%)

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQ--VEQIAAG 349
            +++CG  H AV+TD G L T+G    GQ GHG   N  L           +  +  +  G
Sbjct: 1126 KVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECG 1185

Query: 350  LWHTVCISVEGRVYVFGGNQFGQLGTGVDQA-ENVPKLLETPILESKRAKVVSCGARHSA 408
              HT+ +     VY +G ++FGQLG G     ++ PK++E   L  ++ + ++ G  H+ 
Sbjct: 1186 GEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEE--LTGQKIQAIAAGFAHNI 1243

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP----------RNIACGWWHT 458
            VL + G++ S+G+  +GQLG G    +NIP+ + I+  +             IACG+ H+
Sbjct: 1244 VLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHS 1303

Query: 459  LLLAETTQI 467
            ++ +E  ++
Sbjct: 1304 VICSENGEV 1312



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 4/74 (5%)

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
            P+   K+A  VSCG  H AV+T+DG++ +WG N+ GQLG G  +++ +     +  F  +
Sbjct: 1117 PLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGK 1176

Query: 450  N----IACGWWHTL 459
            +    + CG  HT+
Sbjct: 1177 SPIFMVECGGEHTI 1190


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 28/272 (10%)

Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 541

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I                       SGK    +V  IACG  +SA +T  G L T+G G Y
Sbjct: 542 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G      
Sbjct: 642 GSDGCKTPKLIEK--LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 437 IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P L+  + G    ++A G  H L L E +++
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3142

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3203 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3260

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3261 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 457  HTL 459
            H++
Sbjct: 3321 HSV 3323



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4266

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4267 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4103

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4104 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4147

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4148 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4190

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4191 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4242

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4243 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4300

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4301 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4335



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 149/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+ + G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSS--GTVPIPRQITALSSYVVKKVAVHSG 3056

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 3057 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3106

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3207

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 3208 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3261

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3262 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3319

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3320 SHSVAWT 3326



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4005

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4006 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4065

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4066 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4126 GHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 121/262 (46%), Gaps = 37/262 (14%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASG 268
            G  I K  AG   T  +    +V+ WG   + QLG   GS+IK       +P      S 
Sbjct: 2942 GSLIRKKTAGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSA 2992

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             +                    V ++A G +    VT  G + + G    G+ G G ++ 
Sbjct: 2993 LN--------------------VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSG 3032

Query: 329  QL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
             +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + P+
Sbjct: 3033 TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 3092

Query: 386  LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-H 444
            L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +  
Sbjct: 3093 LIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 3150

Query: 445  GFLPRNIACGWWHTLLLAETTQ 466
            G     +ACG      LA T +
Sbjct: 3151 GHRVIQVACGSRDAQTLALTDE 3172



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 130/328 (39%), Gaps = 73/328 (22%)

Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           ++VK AA     H +++   GEVY+WG              G  G       G    +P 
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536

Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
           E+    +  S K+AG+ VV      T SA   +E               + +S DE    
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594

Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI
Sbjct: 595 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             L+                           V ++ CG + S  +T  G + ++G G   
Sbjct: 653 EKLQDLD------------------------VIKVRCGSQFSIALTKDGQVYSWGKGDNQ 688

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +  
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRV 748

Query: 380 AENVPKLLETPILESKRAKVVSCGARHS 407
            +  P  L  P L++K    ++CG   S
Sbjct: 749 TKPEPTAL--PGLDTKHIVGIACGPAQS 774



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPTALPGLD 760



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 4054 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 4106 ACVTAAGDLYTWG 4118


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 130/247 (52%), Gaps = 29/247 (11%)

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            H++ L++ G+V+ WG G  G+LG G+  +                 + R +   QG    
Sbjct: 4184 HSMALTESGEVFSWGDGDYGKLGHGNSDR---------------QRRPRQIEALQG---- 4224

Query: 283  SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                    V +++CG +HSAVVT  G L TFG G YG+ G G+T+++  P   ++L   Q
Sbjct: 4225 ------EEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQ 4278

Query: 343  VEQIAAGLWHTVCISVEG-RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            + ++A GL HT+ +S +G  V+ FG   +G+LG G   A++ P+ ++  IL     K V+
Sbjct: 4279 IGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVD--ILCGIGIKKVA 4336

Query: 402  CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLL 460
            CG + S  LT+DG V ++G ++   L  G + + N P  VP + G    +IA G  HTL 
Sbjct: 4337 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLA 4396

Query: 461  LAETTQI 467
            L+ +  +
Sbjct: 4397 LSASGDV 4403



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 170/431 (39%), Gaps = 94/431 (21%)

Query: 30   GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
              SP  SP        +CG +    +   G   A      G+L   G++DD     + S 
Sbjct: 4108 AVSPPPSPSFCQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISA 4166

Query: 90   KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
              G             +V +     H +++TE+GEV++WG            D+G  G  
Sbjct: 4167 LQGFVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHG 4208

Query: 150  QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
              D   +   +   Q        GEEVV+                               
Sbjct: 4209 NSDRQRRPRQIEALQ--------GEEVVQ------------------------------- 4229

Query: 210  PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
                   ++ G +H+ +++  G+++ +G G  G+LGLG+       P  +  LE    G 
Sbjct: 4230 -------MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNK-KLPERVAALEGYQIG- 4280

Query: 270  DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL-TFGWGLYGQCGHGSTND 328
                                   E+ACG  H+ VV+  G+++  FG G YG+ G G++  
Sbjct: 4281 -----------------------EVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTA 4317

Query: 329  QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            +  P     L  I ++++A G   +V ++ +G VY FG ++   L  G  +  N P+  +
Sbjct: 4318 KSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQ--Q 4375

Query: 389  TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
             P L     + ++ GA H+  L+  G V +WG N  GQLGLG +     P+LV  + G  
Sbjct: 4376 VPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVREPTLVTSLQGKS 4435

Query: 448  PRNIACGWWHT 458
             R I+ G  H+
Sbjct: 4436 VRQISAGRCHS 4446



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 26/254 (10%)

Query: 216  KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            +V  G   T ++   G V   G G  G+LG G+   +    H++  +  A  G      V
Sbjct: 4122 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL----HVLTVIS-ALQG-----FV 4171

Query: 276  RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                V S G  G            HS  +T++G + ++G G YG+ GHG+++ Q RP   
Sbjct: 4172 VTQLVTSCGSDG------------HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI 4219

Query: 336  SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
             +L   +V Q++ G  H+  ++ +G+++ FG   +G+LG G    + +P+      LE  
Sbjct: 4220 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPE--RVAALEGY 4277

Query: 396  RAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIAC 453
            +   V+CG  H+ V++ DG ++ ++G   YG+LGLG+S  ++ P  V I  G   + +AC
Sbjct: 4278 QIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVAC 4337

Query: 454  GWWHTLLLAETTQI 467
            G   ++ L +   +
Sbjct: 4338 GTQFSVALTKDGHV 4351



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 36/243 (14%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           ++S+  +V+ WG     QL  G++ K++  P L P    A                    
Sbjct: 369 VVSETCEVYVWGSNSSHQLVEGTQEKIL-QPKLAPSFSDA-------------------- 407

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-----LRPSYASSLMD 340
                 + I  G   + V++  G++   G G YG+ G G +N+Q     L      S+  
Sbjct: 408 ------QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 461

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           +   + + G  HT+  + EG V+ +G   +G+LG G    +  PKL++ P L+ K    V
Sbjct: 462 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCV 518

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           S G RHSA +TEDG++ +WG   +G+LG GDS  RNIP+LV     +   ++CG  HT+ 
Sbjct: 519 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIA 577

Query: 461 LAE 463
           L++
Sbjct: 578 LSK 580



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 32/219 (14%)

Query: 206 VTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           +T  P   I KV++      HTL  +  G+V+ WG G  G+LG G+              
Sbjct: 451 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGN-------------- 496

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
              +S +  P L+ QG +   GK     V  ++ G RHSA VT+ G L T+G G +G+ G
Sbjct: 497 ---SSTQKYPKLI-QGPLQ--GKV----VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 546

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAE 381
           HG +N +  P+    + +  V +++ G  HT+ +S +GR V+ FGG   G+LG G     
Sbjct: 547 HGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 604

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
             PK++E   L+    + V  G++ S  LT  GQV +WG
Sbjct: 605 YKPKVIEA--LQGMFIRKVCAGSQSSLALTSTGQVYAWG 641



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +  V+AG RH+  +++ G+++ WG G  G+LG G                  ++ ++
Sbjct: 512 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD-----------------SNSRN 554

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            P LV+            S V E++CG  H+ A+  D   + +FG G  G+ GHG TN  
Sbjct: 555 IPTLVKD----------ISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 604

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLE 388
            +P    +L  + + ++ AG   ++ ++  G+VY +G      LG G  +A  + PKL+E
Sbjct: 605 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE 662

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
              L + R   +S G  H   L+ D +V +WG N  GQ G G+S
Sbjct: 663 E--LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 704



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 125/314 (39%), Gaps = 64/314 (20%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
           G  G  LA +  G++ +WG  D     Y   G    + + +P     P +  VV   +AG
Sbjct: 467 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 521

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           + H  +VTE GE+YTWG            DFG  G    DS  +   +PT     S+   
Sbjct: 522 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 565

Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
           GE       T +  ++     S           GD      P ++    G+ I KV AG 
Sbjct: 566 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 625

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
           + +L L+  GQV+ WG G    LG GS       P LI   E  A+ +            
Sbjct: 626 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI---EELAATR------------ 668

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMD 340
                    + +I+ G  H   ++    +  +G    GQCG G ST    +P   S L  
Sbjct: 669 ---------IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDG 719

Query: 341 IQVEQIAAGLWHTV 354
           + ++QI+AG  H++
Sbjct: 720 VAIQQISAGTSHSL 733


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 118/248 (47%), Gaps = 28/248 (11%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHL-IPCLEHAASGKDRPL- 273
           V+AGG H+L+L+    VW WG    GQLG G+   +  PTP   +P +   ++G+   L 
Sbjct: 75  VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPSVAQVSAGESHSLA 134

Query: 274 LVRQGSV-----NSSGKAGR------------------SYVKEIACGGRHSAVVTDAGAL 310
           L   G V     NSSG+ G                   S +K +A GG HS  +T  G +
Sbjct: 135 LTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDGRV 194

Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
             +G    GQ G+ ST D   P     L    V  +AAG  H++ ++ +GR+Y +G N  
Sbjct: 195 FAWGKNSSGQLGNNSTVDSSIPVQVQGL-PANVTAVAAGGNHSLALTSDGRIYAWGLNSS 253

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           GQLG G     + P L+      SK   V S G  HS  L +DG V +WG N YGQLG G
Sbjct: 254 GQLGDGTTSNSSTPVLVAGLPAGSKPVAV-SAGKDHSLALMQDGTVYAWGGNSYGQLGNG 312

Query: 431 DSIDRNIP 438
            +    +P
Sbjct: 313 TTTASEMP 320



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 121/258 (46%), Gaps = 40/258 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPTPHLIPCLEH 264
            + +V+AG  H+L L+D G+V+ WG    GQLG G+        +++ + T   I  +  
Sbjct: 121 SVAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVV-- 178

Query: 265 AASGKDRPLLVRQGSV-----NSSGKAGR----------------SYVKEIACGGRHSAV 303
           AA G     L   G V     NSSG+ G                 + V  +A GG HS  
Sbjct: 179 AAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPANVTAVAAGGNHSLA 238

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL-MDIQVEQIAAGLWHTVCISVEGRV 362
           +T  G +  +G    GQ G G+T++   P   + L    +   ++AG  H++ +  +G V
Sbjct: 239 LTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTV 298

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARHSAVLTEDGQVLSWG 420
           Y +GGN +GQLG G   A       E P+  +  A V  VS G   S  LT DG V +WG
Sbjct: 299 YAWGGNSYGQLGNGTTTAS------EMPVQVTGLANVTAVSAGGSDSLALTSDGYVYAWG 352

Query: 421 WNKYGQLGLGDSIDRNIP 438
            N  GQLG G + +RN P
Sbjct: 353 LNSSGQLGDGTTSNRNTP 370



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 94/177 (53%), Gaps = 9/177 (5%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++ GG HS V+T    +  +G    GQ G G+T  +  P+ A  L    V Q++AG  H+
Sbjct: 75  VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLP--SVAQVSAGESHS 132

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           + ++ +GRV+ +G N  GQLG G       P  ++    +S   KVV+ G  HS  LT D
Sbjct: 133 LALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDST-IKVVAAGGNHSLALTSD 191

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAETTQI 467
           G+V +WG N  GQLG   ++D +IP  V + G LP N   +A G  H+L L    +I
Sbjct: 192 GRVFAWGKNSSGQLGNNSTVDSSIP--VQVQG-LPANVTAVAAGGNHSLALTSDGRI 245



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 138/349 (39%), Gaps = 94/349 (26%)

Query: 40  SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           +P PA+  G  S   V  G    +LA ++ G++  WG  +  GQ  L  G   ++  P  
Sbjct: 112 TPTPAQ--GLPSVAQVSAGES-HSLALTDDGRVFAWG-LNSSGQ--LGDGTTADSRTPVQ 165

Query: 100 ---LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
              L T++++   AAG  H +++T  G V+ WG               S+G    +ST  
Sbjct: 166 VQGLATDSTIKVVAAGGNHSLALTSDGRVFAWGKN-------------SSGQLGNNST-V 211

Query: 157 QSALPTE-QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
            S++P + Q  P++                                            +T
Sbjct: 212 DSSIPVQVQGLPAN--------------------------------------------VT 227

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            VAAGG H+L L+  G+++ WG    GQLG G+                  S    P+LV
Sbjct: 228 AVAAGGNHSLALTSDGRIYAWGLNSSGQLGDGT-----------------TSNSSTPVLV 270

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                  +G    S    ++ G  HS  +   G +  +G   YGQ G+G+T     P   
Sbjct: 271 -------AGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASEMPVQV 323

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
           + L +  V  ++AG   ++ ++ +G VY +G N  GQLG G     N P
Sbjct: 324 TGLAN--VTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTTSNRNTP 370



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 10/134 (7%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P Y +S   +    ++AG  H++ ++ +  V+ +G N  GQLG G       P    TP 
Sbjct: 61  PLYPASAAVLGEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTP----TPA 116

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP--- 448
                   VS G  HS  LT+DG+V +WG N  GQLG G + D   P  V + G      
Sbjct: 117 QGLPSVAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTP--VQVQGLATDST 174

Query: 449 -RNIACGWWHTLLL 461
            + +A G  H+L L
Sbjct: 175 IKVVAAGGNHSLAL 188


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 132/260 (50%), Gaps = 32/260 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R+                   DR
Sbjct: 4323 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4365

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV    +N         V +IACG  HSA +T +G +LT+G G YG+ GHG + DQLR
Sbjct: 4366 PKLVEH--LNGMN------VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 4417

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 4418 PQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 4477

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID--RNIPSLVPIHGFL 447
              L       V CG++ S  LT+ G V +WG   + +LG G S+D  R    +  + G  
Sbjct: 4478 --LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG-SVDHVRRPKKVAALQGKK 4534

Query: 448  PRNIACGWWHTLLLAETTQI 467
              +IA G  H +  +++ ++
Sbjct: 4535 IISIATGSLHCVACSDSGEV 4554



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 132/261 (50%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R  +                 D+
Sbjct: 3182 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3224

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV   ++ S        ++++ACG  HSA ++  G L T+G G YG+ GHG  + QL+
Sbjct: 3225 PRLVE--TLRSKK------IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLK 3276

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++L   +V Q+A G     T+ ++ +G V+ +G   FG+LG G  +  + P  +E 
Sbjct: 3277 PKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIER 3336

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L       + CGA+ S  LT  G+V +WG   Y +LG G   D+++    PI G   R
Sbjct: 3337 --LSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIAGLRGR 3392

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + +  Q+
Sbjct: 3393 RVIHVAVGALHCLAVTDAGQV 3413



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 128/271 (47%), Gaps = 32/271 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            T S  +  L P      +A G +   I+   G+V+  G G  G+LGLG     VP PH +
Sbjct: 3120 TFSQTISRLRP----IHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGV-THNVPLPHQL 3174

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            P L           +V++ +V+S              GG+H+  +T  G + ++G G  G
Sbjct: 3175 PVLHQ--------YVVKKVAVHS--------------GGKHALALTLDGKVFSWGEGEDG 3212

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            + GHG+     +P    +L   ++  +A G  H+  IS +G +Y +G  ++G+LG G + 
Sbjct: 3213 KLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNS 3272

Query: 380  AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
             +  PKL+    L  +R   V+CG+R   +  LTEDG V SWG   +G+LG G S   + 
Sbjct: 3273 TQLKPKLVAA--LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT 3330

Query: 438  PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P  +  + G     I CG   +L L    ++
Sbjct: 3331 PHEIERLSGIGVIQIECGAQFSLALTRAGEV 3361



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 34/203 (16%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           GRH + +      + WG G + +LG G +  + VPT   I  L+                
Sbjct: 629 GRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTK--ITLLDRC-------------- 672

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                      VK + CG  +SA +T +G L T+G G Y + GHG+++DQ  P+   +L 
Sbjct: 673 -----------VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALT 721

Query: 340 DIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           + ++  +A  +G  H++C++ EG VY +G   +G+LG G       P L+E+      + 
Sbjct: 722 EHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVES----LPKV 777

Query: 398 KVVSCGARHSAVLTEDGQVLSWG 420
           + V  GA+ S  LT DGQ+ SWG
Sbjct: 778 QRVFAGAQFSMALTTDGQLYSWG 800



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 103/239 (43%), Gaps = 33/239 (13%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P LV    G+ +  +A G  H+  ++  G V  WG G  G+LG G     +  P L+  L
Sbjct: 4366 PKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPQLVEAL 4424

Query: 263  ------EHAASGKDRPLLVRQGSVN-------SSGKAGR--------SY---------VK 292
                  + A    D   L      N         GK GR         Y         V 
Sbjct: 4425 LGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVI 4484

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            ++ CG + S  +T +GA+ T+G G + + GHGS +   RP   ++L   ++  IA G  H
Sbjct: 4485 KVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLH 4544

Query: 353  TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
             V  S  G VY +G N  GQLG G   A   P+L+    L+ K    V+CG+ H+  L+
Sbjct: 4545 CVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCGSAHTLALS 4601



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 148/367 (40%), Gaps = 60/367 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
             GG        ++GK+   G   +     L  G     P P  LP     VVK  A   G
Sbjct: 3134 AGGSKSLFIVGQNGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 3190

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H +++T  G+V++WG  E           G  G   + +  K   + T ++    K+ 
Sbjct: 3191 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVETLRS----KKI 3236

Query: 173  GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
             +       +++   + E              GD    L P LV    G ++ +VA G R
Sbjct: 3237 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSR 3296

Query: 223  --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
               TL L++ G V+ WG G  G+LG G                  + G D P  + +  +
Sbjct: 3297 DAQTLALTEDGAVFSWGDGDFGKLGRG-----------------GSEGSDTPHEIER--L 3337

Query: 281  NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
            +  G      V +I CG + S  +T AG + T+G G Y + GHG      +P   + L  
Sbjct: 3338 SGIG------VIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRG 3391

Query: 341  IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
             +V  +A G  H + ++  G+VY +G N  GQ G+G       P L+    L++     V
Sbjct: 3392 RRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG--LDAVFVNRV 3449

Query: 401  SCGARHS 407
            +CG+ HS
Sbjct: 3450 ACGSSHS 3456



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+++ ++  ++   IA G      +   G+VY  G    G+LG GV    NVP   + P+
Sbjct: 3119 PTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGV--THNVPLPHQLPV 3176

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT DG+V SWG  + G+LG G+    + P LV  +     
Sbjct: 3177 LHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKI 3236

Query: 449  RNIACGWWHT 458
            R++ACG  H+
Sbjct: 3237 RDVACGSSHS 3246



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 59/204 (28%)

Query: 308  GALLTFGWG--LYGQCG--HGSTNDQLRPSYASSLM------------------------ 339
            GA   +GWG    GQ G   GS      P  A SL+                        
Sbjct: 4234 GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFAT 4293

Query: 340  --------------------------DIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFG 371
                                       + V+++A  +G  H + ++ EG VY +G  + G
Sbjct: 4294 GYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4353

Query: 372  QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            +LG G   + + PKL+E   L       ++CG+ HSA +T  G VL+WG  +YG+LG GD
Sbjct: 4354 KLGHGNRMSYDRPKLVEH--LNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD 4411

Query: 432  SIDRNIPSLV-PIHGFLPRNIACG 454
            S D+  P LV  + G+   +IACG
Sbjct: 4412 SEDQLRPQLVEALLGYRAIDIACG 4435



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 1/146 (0%)

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           C GRH   +       ++G G   + GHG T+ +  P+  + L+D  V+ +  G  ++  
Sbjct: 627 CEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKIT-LLDRCVKAVFCGCSYSAA 685

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           I+  G +Y +G   + +LG G    + +P ++            +  G  HS  LT +G 
Sbjct: 686 ITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGH 745

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV 441
           V +WG   YG+LG G+      P LV
Sbjct: 746 VYAWGDADYGKLGNGNLNGSMSPVLV 771



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 122/296 (41%), Gaps = 35/296 (11%)

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           + R   S    E      GD      P  +TL     +  V  G  ++  ++  G ++ W
Sbjct: 637 INRNAYSWGNGEDHRLGHGDTHARAVPTKITLLDRC-VKAVFCGCSYSAAITCSGNLYTW 695

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCL-EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           G G   +LG G+     P P ++  L EH        + V  GS                
Sbjct: 696 GRGTYARLGHGNSDDQ-PLPTVVMALTEHEI------IDVALGS---------------- 732

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
            G  HS  +T  G +  +G   YG+ G+G+ N  + P    SL  +Q  ++ AG   ++ 
Sbjct: 733 -GDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQ--RVFAGAQFSMA 789

Query: 356 ISVEGRVYVFG-GNQFG-QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           ++ +G++Y +G  +  G QL     Q  +VP+L+    L+ KR   V+ G  H   L+  
Sbjct: 790 LTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLISG--LQHKRIVDVAVGVAHCLALSSC 847

Query: 414 GQVLSWGWNKYGQL---GLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQ 466
           G+V  WG N   Q+    +       +P LV +       +AC    +L+  ++++
Sbjct: 848 GEVFGWGRNDSQQICPSSVSSEPLLRVPILVALPTLPASGVACTASQSLIWTQSSR 903



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 18/176 (10%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++I C      ++++ G L  + W ++          +  P     +    +  IA+  
Sbjct: 578 VQQIVCSESIVLILSEDGKL--YNWRMF--------KPETEPQLLEEIAHETIVSIASHC 627

Query: 351 --WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
              H + I +    Y +G  +  +LG G   A  VP  +    L  +  K V CG  +SA
Sbjct: 628 EGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKI---TLLDRCVKAVFCGCSYSA 684

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLLL 461
            +T  G + +WG   Y +LG G+S D+ +P++V     H  +   +  G  H+L L
Sbjct: 685 AITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCL 740



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 83/217 (38%), Gaps = 31/217 (14%)

Query: 42  IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
           +P ++   D        GC ++ A + SG L TWG       +Y   G      +P P  
Sbjct: 662 VPTKITLLDRCVKAVFCGCSYSAAITCSGNLYTWGRG-----TYARLGHGNSDDQPLPTV 716

Query: 102 ----TEASVVKAA--AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
               TE  ++  A  +G AH + +T  G VY WG            D+G  G+   +  G
Sbjct: 717 VMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWG----------DADYGKLGN--GNLNG 764

Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--GDEFFTLS------PCLVT 207
             S +  E  P   +           T+  +  S   AS  G +    S      P L++
Sbjct: 765 SMSPVLVESLPKVQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLIS 824

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
                +I  VA G  H L LS  G+V+GWG     Q+
Sbjct: 825 GLQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQI 861



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)

Query: 46   LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
            L G  +    CG G    L  ++   + +WG  D     Y   G+ G      P   E+ 
Sbjct: 4424 LLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4478

Query: 105  ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
                V+K   G    V++T++G VYTWG                 G F +   G      
Sbjct: 4479 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4516

Query: 162  TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
                         + V+R K  +A +                       G KI  +A G 
Sbjct: 4517 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4542

Query: 222  RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             H +  SD G+V+ WG   EGQLG G+ +  +  P L+  L+
Sbjct: 4543 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4583


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R  +                 D+
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3115

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV               ++++ACG  HSA ++  G L T+G G YG+ GHG    QL+
Sbjct: 3116 PRLVEALRAKK--------IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLK 3167

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++L   +V Q+A G     T+ ++ +G V+ +G   FG+LG G  +  + P  +E 
Sbjct: 3168 PKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIER 3227

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L       + CGA+ S  LT  G+V +WG   Y +LG G   D+++    PI G   R
Sbjct: 3228 --LSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLRGR 3283

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + +  Q+
Sbjct: 3284 RVIHVAVGALHCLAVTDAGQV 3304



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 134/309 (43%), Gaps = 79/309 (25%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R+                   DR
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4178

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV   +  S        V +IACG  HSA +T +G +LT+G G YG+ GHG + DQLR
Sbjct: 4179 PKLVEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 4230

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 4231 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 4290

Query: 390  --------------------------------------------------PILESKRAKV 399
                                                                L+ K+   
Sbjct: 4291 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4350

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            ++ G+ H    ++ G+V +WG N  GQLG G       P LV  + G     + CG  HT
Sbjct: 4351 IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHT 4410

Query: 459  LLLAETTQI 467
            L L+ T+Q+
Sbjct: 4411 LALS-TSQL 4418



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 130/271 (47%), Gaps = 32/271 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            T S  +  L P      +A G +   I+S  G+V+  G G  G+LGLG     VP PH +
Sbjct: 3011 TFSQTISRLRP----IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQL 3065

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            P L        R  +V++ +V+S              GG+H+  +T  G + ++G G  G
Sbjct: 3066 PVL--------RQYVVKKVAVHS--------------GGKHALALTLDGKVFSWGEGEDG 3103

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            + GHG+     +P    +L   ++  +A G  H+  IS +G +Y +G  ++G+LG G + 
Sbjct: 3104 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNT 3163

Query: 380  AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
             +  PKL+    L  +R   V+CG+R   +  LTEDG V SWG   +G+LG G S   + 
Sbjct: 3164 TQLKPKLVTA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT 3221

Query: 438  PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P  +  + G     I CG   +L L    ++
Sbjct: 3222 PHEIERLSGIGVVQIECGAQFSLALTRAGEV 3252



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 34/227 (14%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            ++GWG+   GQLG   GSRIK  PT    PC    A    RP+                 
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIK-TPT----PC---EALSLLRPV----------------- 4085

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--A 348
              ++A G +    VT  G L   G+G  G+ G G ++    P+   SL  + V+++A  +
Sbjct: 4086 --QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNS 4143

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G  H + ++ EG VY +G  + G+LG G   + + PKL+E   L       ++CG+ HSA
Sbjct: 4144 GGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH--LNGMSVADIACGSAHSA 4201

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
             +T  G VL+WG  +YG+LG GDS D+  P LV  + G+   +IACG
Sbjct: 4202 AITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4248



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 126/308 (40%), Gaps = 35/308 (11%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQA 165
            V   +G  HC+++T  GEVY WG  E        R         +   G   A +    A
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA 4198

Query: 166  PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGRH 223
              +   A   V+   K    R        GD    L P LV    G +   +A  +G   
Sbjct: 4199 HSAAITASGHVLTWGKGRYGRL-----GHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQ 4253

Query: 224  TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
            TL ++D   VW WG G  G+LG G                  + G   P  +        
Sbjct: 4254 TLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKLPYKI-------E 4289

Query: 284  GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              AG   VK + CG + S  +T +GA+ T+G G + + GHGS +   RP   ++L   ++
Sbjct: 4290 SLAGLGVVK-VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4348

Query: 344  EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
              IA G  H V  S  G VY +G N  GQLG G   A   P+L+    L+ K    V+CG
Sbjct: 4349 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCG 4406

Query: 404  ARHSAVLT 411
            + H+  L+
Sbjct: 4407 SAHTLALS 4414



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 33/203 (16%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           GRH L +      + WG G + +LG G +  + VPT   I  LE                
Sbjct: 625 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTK--IAALEQHC------------- 669

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                      V+ + CG  +SA +T  G LLT+G G Y + GHG+++D+  P+   +L 
Sbjct: 670 -----------VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS 718

Query: 340 DIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           D  V  +A  +G  H++ ++ EG V+ +G   +G+LG G       P L+E+      R 
Sbjct: 719 DHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVES----LPRV 774

Query: 398 KVVSCGARHSAVLTEDGQVLSWG 420
           + V  G++ S  L+ +GQ+ +WG
Sbjct: 775 QRVFAGSQFSVALSSEGQLYTWG 797



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 147/367 (40%), Gaps = 60/367 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
             GG       S+ GK+   G   +     L  G     P P  LP     VVK  A   G
Sbjct: 3025 AGGSKSLFIVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSG 3081

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H +++T  G+V++WG  E           G  G   + +  K   +   +A    K+ 
Sbjct: 3082 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 3127

Query: 173  GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
             +       +++   + E              GD    L P LVT   G ++ +VA G R
Sbjct: 3128 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSR 3187

Query: 223  --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
               TL L++ G V+ WG G  G+LG G                  + G D P  + +  +
Sbjct: 3188 DAQTLALTEDGAVFSWGDGDFGKLGRG-----------------GSEGSDTPHEIER--L 3228

Query: 281  NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
            +  G      V +I CG + S  +T AG + T+G G Y + GHG      +P     L  
Sbjct: 3229 SGIG------VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRG 3282

Query: 341  IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
             +V  +A G  H + ++  G+VY +G N  GQ G+G       P L+    L++     V
Sbjct: 3283 RRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG--LDAVFVNRV 3340

Query: 401  SCGARHS 407
            +CG+ HS
Sbjct: 3341 ACGSSHS 3347



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+++ ++  ++   IA G      +S +G+VY  G    G+LG GV    NVP   + P+
Sbjct: 3010 PTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPV 3067

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT DG+V SWG  + G+LG G+    + P LV  +     
Sbjct: 3068 LRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKI 3127

Query: 449  RNIACGWWHT 458
            R++ACG  H+
Sbjct: 3128 RDVACGSSHS 3137



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 65/146 (44%)

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           C GRH   +       ++G G   + GHG T+ +  P+  ++L    V+ +  G  ++  
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 682

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           I+  G +  +G   + +LG G     ++P L+            +  G  HS  LT +G 
Sbjct: 683 ITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGL 742

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV 441
           V +WG   YG+LG G+      P LV
Sbjct: 743 VFAWGDGDYGKLGNGNCNGSLQPILV 768



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 30/164 (18%)

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
           R  +K++AC      +++  G L T  W L           +  P        + +E++A
Sbjct: 571 RFQIKQVACCETQMLILSQEGKLYT--WRL--------AKPEAEP--------LPMEEVA 612

Query: 348 AGLWHTVCISVEGR----------VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
             ++ ++    EGR           Y +G  +  +LG G   A  VP   +   LE    
Sbjct: 613 HDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPT--KIAALEQHCV 670

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           + V CG  +SA +T  G +L+WG   Y +LG G+S DR++P+LV
Sbjct: 671 QSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLV 714



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 41/219 (18%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV       +  VA  +G  H+L L+  G V+ WG G  G+LG G+            
Sbjct: 711 PTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGN------------ 758

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                 +G  +P+LV               V+ +  G + S  ++  G L T  WG    
Sbjct: 759 -----CNGSLQPILVE----------SLPRVQRVFAGSQFSVALSSEGQLYT--WGKATC 801

Query: 321 CGHGSTNDQLR----PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            GH      ++    P   SSL   ++  +A  + H + +S  G V+ +G N   Q+   
Sbjct: 802 LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPA 861

Query: 377 VDQAENVPKLLETPILESK---RAKVVSCGARHSAVLTE 412
              +E    LL TPIL S     A  ++C +  S V T+
Sbjct: 862 SVSSE---PLLRTPILVSLPTFPASGIACTSAQSLVWTQ 897



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 66/222 (29%)

Query: 46   LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
            L G  +    CG G    L  ++   + +WG  D     Y   G+ G      P   E+ 
Sbjct: 4237 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4291

Query: 105  ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
                VVK   G    V++T++G VYTWG                 G F +   G      
Sbjct: 4292 AGLGVVKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4329

Query: 162  TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
                         + V+R K  +A +                       G KI  +A G 
Sbjct: 4330 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4355

Query: 222  RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             H +  SD G+V+ WG   EGQLG G+ +  +  P L+  L+
Sbjct: 4356 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4396



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
            G  F++A S  G+L TWG A   G   +     G   P          +V  A   AHC
Sbjct: 779 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 838

Query: 117 VSVTEAGEVYTWG 129
           ++++ +GEV+ WG
Sbjct: 839 LALSSSGEVFGWG 851


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R  +                 D+
Sbjct: 2728 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 2770

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV               ++++ACG  HSA ++  G L T+G G YG+ GHG    QL+
Sbjct: 2771 PRLVEALRAKK--------IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLK 2822

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++L   +V Q+A G     T+ ++ +G V+ +G   FG+LG G  +  + P  +E 
Sbjct: 2823 PKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIER 2882

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L       + CGA+ S  LT  G+V +WG   Y +LG G   D+++    PI G   R
Sbjct: 2883 --LSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLRGR 2938

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + +  Q+
Sbjct: 2939 RVIHVAVGALHCLAVTDAGQV 2959



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 32/271 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            T S  +  L P      +A G +   I+S  G+V+  G G  G+LGLG     VP PH +
Sbjct: 2666 TFSQTISRLRP----IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQL 2720

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            P L           +V++ +V+S              GG+H+  +T  G + ++G G  G
Sbjct: 2721 PVLHQ--------YVVKKVAVHS--------------GGKHALALTLDGKVFSWGEGEDG 2758

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            + GHG+     +P    +L   ++  +A G  H+  IS +G +Y +G  ++G+LG G + 
Sbjct: 2759 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNT 2818

Query: 380  AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
             +  PKL+    L  +R   V+CG+R   +  LTEDG V SWG   +G+LG G S   + 
Sbjct: 2819 TQLKPKLVTA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT 2876

Query: 438  PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P  +  + G     I CG   +L L    ++
Sbjct: 2877 PHEIERLSGIGVVQIECGAQFSLALTRAGEV 2907



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 33/203 (16%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           GRH L +      + WG G + +LG G +  + VPT   I  LE                
Sbjct: 279 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTK--IAALE---------------- 320

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                   +  V+ + CG  +SA +T  G LLT+G G Y + GHG+++D+  P+   +L 
Sbjct: 321 --------QHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS 372

Query: 340 DIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           D  V  +A  +G  H++ ++ EG V+ +G   +G+LG G       P L+E+      R 
Sbjct: 373 DHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVES----LPRV 428

Query: 398 KVVSCGARHSAVLTEDGQVLSWG 420
           + V  G++ S  L+ +GQ+ +WG
Sbjct: 429 QRVFAGSQFSVALSSEGQLYTWG 451



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 147/367 (40%), Gaps = 60/367 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
             GG       S+ GK+   G   +     L  G     P P  LP     VVK  A   G
Sbjct: 2680 AGGSKSLFIVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 2736

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H +++T  G+V++WG  E           G  G   + +  K   +   +A    K+ 
Sbjct: 2737 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 2782

Query: 173  GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
             +       +++   + E              GD    L P LVT   G ++ +VA G R
Sbjct: 2783 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSR 2842

Query: 223  --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
               TL L++ G V+ WG G  G+LG G                  + G D P  + +  +
Sbjct: 2843 DAQTLALTEDGAVFSWGDGDFGKLGRG-----------------GSEGSDTPHEIER--L 2883

Query: 281  NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
            +  G      V +I CG + S  +T AG + T+G G Y + GHG      +P     L  
Sbjct: 2884 SGIG------VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRG 2937

Query: 341  IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
             +V  +A G  H + ++  G+VY +G N  GQ G+G       P L+    L++     V
Sbjct: 2938 RRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG--LDAVFVNRV 2995

Query: 401  SCGARHS 407
            +CG+ HS
Sbjct: 2996 ACGSSHS 3002



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+++ ++  ++   IA G      +S +G+VY  G    G+LG GV    NVP   + P+
Sbjct: 2665 PTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPV 2722

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT DG+V SWG  + G+LG G+    + P LV  +     
Sbjct: 2723 LHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKI 2782

Query: 449  RNIACGWWHT 458
            R++ACG  H+
Sbjct: 2783 RDVACGSSHS 2792



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 65/146 (44%)

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           C GRH   +       ++G G   + GHG T+ +  P+  ++L    V+ +  G  ++  
Sbjct: 277 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 336

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           I+  G +  +G   + +LG G     ++P L+            +  G  HS  LT +G 
Sbjct: 337 ITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGL 396

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV 441
           V +WG   YG+LG G+      P LV
Sbjct: 397 VFAWGDGDYGKLGNGNCNGSLQPILV 422



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 30/164 (18%)

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
           R  +K++AC      +++  G L T  W L           +  P        + +E++A
Sbjct: 225 RFQIKQVACCETQMLILSQEGKLYT--WRL--------AKPEAEP--------LPMEEVA 266

Query: 348 AGLWHTVCISVEGR----------VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
             ++ ++    EGR           Y +G  +  +LG G   A  VP   +   LE    
Sbjct: 267 HDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPT--KIAALEQHCV 324

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           + V CG  +SA +T  G +L+WG   Y +LG G+S DR++P+LV
Sbjct: 325 QSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLV 368



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 41/219 (18%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV       +  VA  +G  H+L L+  G V+ WG G  G+LG G+            
Sbjct: 365 PTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGN------------ 412

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                 +G  +P+LV               V+ +  G + S  ++  G L T  WG    
Sbjct: 413 -----CNGSLQPILVE----------SLPRVQRVFAGSQFSVALSSEGQLYT--WGKATC 455

Query: 321 CGHGSTNDQLR----PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            GH      ++    P   SSL   ++  +A  + H + +S  G V+ +G N   Q+   
Sbjct: 456 LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPA 515

Query: 377 VDQAENVPKLLETPILESK---RAKVVSCGARHSAVLTE 412
              +E    LL TPIL S     A  ++C +  S V T+
Sbjct: 516 SVSSE---PLLRTPILVSLPTFPASGIACTSAQSLVWTQ 551



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
            G  F++A S  G+L TWG A   G   +     G   P          +V  A   AHC
Sbjct: 433 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 492

Query: 117 VSVTEAGEVYTWG 129
           ++++ +GEV+ WG
Sbjct: 493 LALSSSGEVFGWG 505


>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
 gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
          Length = 400

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 42/262 (16%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDR 271
           K+ +V+AG  H+  ++  G+++ WG    GQLGLG R  K+V TP  + CL  A      
Sbjct: 101 KVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADAR----- 155

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS------ 325
                              VK +A G  HS   T+ G +L++G    G+ GHG       
Sbjct: 156 -------------------VKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILG 196

Query: 326 ---TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
              T  +  P    +L  +++++IAAG+ H+ CI  +G +++FG  Q  + G G    E 
Sbjct: 197 FSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG--QKTEKGFGRSGDEL 254

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            P ++E    E   ++ V+CG  H+ V+T+ G + SWG N+ G LGLG +     P ++ 
Sbjct: 255 RPTVVE----EVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLK 310

Query: 443 --IHGFLPRNIACGWWHTLLLA 462
             +  F    ++CGW HT +++
Sbjct: 311 SSLFKFPVSKVSCGWKHTAVIS 332



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 10/171 (5%)

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +T++G +   G   +GQ G GS+          S  D +V +++AG  H+  ++ +G++
Sbjct: 62  FLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKL 121

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           + +G N  GQLG G    + V    +   L   R K+V+ G+ HS   TE+G+VLSWG  
Sbjct: 122 FAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAA 181

Query: 423 KYGQLG-------LGDSIDRN--IPSLVP-IHGFLPRNIACGWWHTLLLAE 463
             G+LG       LG SI  +   P L+  + G   + IA G  H+  + E
Sbjct: 182 GAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDE 232



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 141/364 (38%), Gaps = 97/364 (26%)

Query: 65  ATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           A +  GKL  WG  +  GQ  L   +GK   TP       +A V   A G  H ++ TE 
Sbjct: 114 AVTADGKLFAWGR-NSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEE 172

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           GEV +WG               +AG+ +     K S L            G  +     T
Sbjct: 173 GEVLSWG---------------AAGAGRLGHGHKTSIL------------GFSITTSEYT 205

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                               P L+    GVKI ++AAG  H+  + + G ++ +G   E 
Sbjct: 206 --------------------PRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEK 245

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKD-RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
             G                     SG + RP +V +            + +E+ACGG H+
Sbjct: 246 GFG--------------------RSGDELRPTVVEE----------VPFSEEVACGGYHT 275

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS-YASSLMDIQVEQIAAGLWHTVCISVEG 360
            VVTD+G L ++G    G  G G T+    P    SSL    V +++ G  HT  IS  G
Sbjct: 276 CVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVIS-GG 334

Query: 361 RVYVFG-----GNQF-------GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            +Y +G     G  F       GQLG G D     P ++E    ++ RA  VSCG  H+ 
Sbjct: 335 DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVE--FGKNARAVHVSCGFNHTG 392

Query: 409 VLTE 412
            + E
Sbjct: 393 AIFE 396


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 184/413 (44%), Gaps = 69/413 (16%)

Query: 72  LITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
           L+TWGS       + +  K  + TPE  P    + +   + G  +  ++TE G+VY WG 
Sbjct: 544 LMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWG- 602

Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK----RRKTSSAR 186
           R  V +  +    G+ G+F             +Q  P    + +E+V        +++ +
Sbjct: 603 RGSVKNPPIAT-LGN-GTFD------------DQLLPQKVESLQEIVVISIGFYHSAAVK 648

Query: 187 EESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
              E              GD F    P +V       +T+V  G +HT+ L+  G+V+ W
Sbjct: 649 SNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTW 708

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G    GQLGLG   K   TP L+  L+                        + ++ +IAC
Sbjct: 709 GTSEYGQLGLGDTQKNC-TPMLVTSLD------------------------KYHIIQIAC 743

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G  H+AV+T+   +L FG G       GS N    P    SL  + +E+++ G + T  +
Sbjct: 744 GATHNAVLTNNREVLVFGNG----AAMGSANIISIPIMVPSLKIMNIERLSCGHYSTAAL 799

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           +  G VY +G  Q  +LG G   +E  PKL+ET  L ++  + +SCG RH A LT+ G++
Sbjct: 800 TECGDVYTWGSGQ--ELGHGHGTSEAHPKLVET--LRNQSIRQISCGGRHMAFLTDSGKI 855

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP---RNIACGWWHTLLLAETTQ 466
            + G + +GQLG     D+N P    I   L     +I+CG  H   L +TT+
Sbjct: 856 YTSGKDPFGQLGHAAG-DQNRPK--KIDSLLKTTFMSISCGENHNAALFDTTR 905



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 106/256 (41%), Gaps = 34/256 (13%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           +I  ++ G  H+  +   G++  WG G +GQLG G      P P ++  +          
Sbjct: 633 EIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQ-PIPKVVQSIT--------- 682

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                            +V ++ CG +H+  +T  G + T+G   YGQ G G T     P
Sbjct: 683 ---------------SHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTP 727

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
              +SL    + QIA G  H   ++    V VFG       G  +  A  +   +  P L
Sbjct: 728 MLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGN------GAAMGSANIISIPIMVPSL 781

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI 451
           +    + +SCG   +A LTE G V +WG  +  +LG G       P LV  +     R I
Sbjct: 782 KIMNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGHGTSEAHPKLVETLRNQSIRQI 839

Query: 452 ACGWWHTLLLAETTQI 467
           +CG  H   L ++ +I
Sbjct: 840 SCGGRHMAFLTDSGKI 855



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 153/389 (39%), Gaps = 69/389 (17%)

Query: 41  PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG--SADDEGQSYLTSGKHGETPE 96
           P P RL   +   D+C   CG  ++ A +E+G +  WG  S  +   + L +G   +   
Sbjct: 566 PTPERLPNFN-ISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLL 624

Query: 97  PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE----------CVPSAKVTRDFGSA 146
           P  + +   +V  + G+ H  +V   GE+ TWG  E            P  KV +   S 
Sbjct: 625 PQKVESLQEIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSH 684

Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV 206
              Q     K +   T+                +  +    E      GD     +P LV
Sbjct: 685 WVTQVQCGEKHTICLTKNG--------------KVFTWGTSEYGQLGLGDTQKNCTPMLV 730

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
           T      I ++A G  H  +L++  +V  +G G      +GS   ++  P ++P L+   
Sbjct: 731 TSLDKYHIIQIACGATHNAVLTNNREVLVFGNGA----AMGSA-NIISIPIMVPSLKIMN 785

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
                                   ++ ++CG   +A +T+ G + T  WG   + GHG  
Sbjct: 786 ------------------------IERLSCGHYSTAALTECGDVYT--WGSGQELGHGHG 819

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV---DQAENV 383
             +  P    +L +  + QI+ G  H   ++  G++Y  G + FGQLG      ++ + +
Sbjct: 820 TSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHAAGDQNRPKKI 879

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTE 412
             LL+T  +       +SCG  H+A L +
Sbjct: 880 DSLLKTTFMS------ISCGENHNAALFD 902



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 141/362 (38%), Gaps = 72/362 (19%)

Query: 22  VYMWGYLPGTSPEKSPILSPIPARLCGG-----------DSWKDVCGGGCGF--ALATSE 68
           VYMWG        +  + +P  A L  G           +S +++     GF  + A   
Sbjct: 598 VYMWG--------RGSVKNPPIATLGNGTFDDQLLPQKVESLQEIVVISIGFYHSAAVKS 649

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVY 126
           +G+L+TWG  +D GQ  L  G     P P  + +  S  V +   G  H + +T+ G+V+
Sbjct: 650 NGELLTWGCGED-GQ--LGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVF 706

Query: 127 TWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
           TWG          T ++G    G  QK+ T     L T        +           ++
Sbjct: 707 TWG----------TSEYGQLGLGDTQKNCT---PMLVTSLDKYHIIQIACGATHNAVLTN 753

Query: 185 AREE---SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
            RE        A G       P +V     + I +++ G   T  L++ G V+ WG G E
Sbjct: 754 NREVLVFGNGAAMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQE 813

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
              G G+       P L+  L + +                        +++I+CGGRH 
Sbjct: 814 LGHGHGTS---EAHPKLVETLRNQS------------------------IRQISCGGRHM 846

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           A +TD+G + T G   +GQ GH +  DQ RP    SL+      I+ G  H   +    R
Sbjct: 847 AFLTDSGKIYTSGKDPFGQLGHAA-GDQNRPKKIDSLLKTTFMSISCGENHNAALFDTTR 905

Query: 362 VY 363
            +
Sbjct: 906 SF 907



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 12/183 (6%)

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST--NDQLRPSYASSLMDIQVEQIAAGL 350
           E +   R +  +  +  L+T+G G Y + G  S   + Q  P    +     +  I+ G 
Sbjct: 527 ESSLSMRSATQLDTSRGLMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGS 586

Query: 351 WHTVCISVEGRVYVFG-----GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           +++  ++  G VY++G           LG G    + +P+ +E+     +   V+S G  
Sbjct: 587 YYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVES----LQEIVVISIGFY 642

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           HSA +  +G++L+WG  + GQLG GD  ++ IP +V  I       + CG  HT+ L + 
Sbjct: 643 HSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKN 702

Query: 465 TQI 467
            ++
Sbjct: 703 GKV 705


>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
          Length = 526

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 128/252 (50%), Gaps = 31/252 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 57  GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K    +V E+ACG  HS V+T  G +  
Sbjct: 112 -TNHGLVPC---------------HISTNLSNK----HVIEVACGSYHSLVLTSDGEVFA 151

Query: 313 FGWGLYGQCGHGSTNDQLRPS-YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P    SSL +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNG 211

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G    ++ P  L    L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 212 QLGLGSSGNQSTPCRLA---LQGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 268

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 269 KSNQSYPTPVVV 280



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 106/181 (58%), Gaps = 6/181 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L +  V ++
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKHVIEV 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TSSLQNKVVVNIACGQMC 192

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQ 466
           S  + ++G+V  WG+N  GQLGLG S +++ P  + + G   + +ACG+ HTL+L +  Q
Sbjct: 193 SMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRLALQGVRVQRVACGYAHTLVLTDEGQ 252

Query: 467 I 467
           +
Sbjct: 253 V 253



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 124/331 (37%), Gaps = 92/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 65  PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 120

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG             + ++G     ST  
Sbjct: 121 ISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 167

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
           Q                   + RR TSS + +                         +  
Sbjct: 168 QP------------------IPRRVTSSLQNKV------------------------VVN 185

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G   ++ + D G+V+ WGY G GQLGLGS           PC            L  
Sbjct: 186 IACGQMCSMAVVDNGEVYVWGYNGNGQLGLGS-----SGNQSTPCR-----------LAL 229

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
           QG            V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+   
Sbjct: 230 QGV----------RVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVV 279

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 280 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 310



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 17/120 (14%)

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTEDGQ 415
           +V   V+V G N  G LG G  Q+   P+ L++  L  K+   +S G+  H  + T +G+
Sbjct: 38  TVNDEVFVLGTNCCGCLGLGDVQSTIEPRRLDS--LSGKKIACLSYGSGPHIVLATTEGE 95

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN--------IACGWWHTLLLAETTQI 467
           V +WG N Y QLG G +       LVP H  +  N        +ACG +H+L+L    ++
Sbjct: 96  VFTWGHNAYSQLGNGTTNH----GLVPCH--ISTNLSNKHVIEVACGSYHSLVLTSDGEV 149



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+      K V    CG   ++A  ++G++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE-ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G    P  L  +   V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQSTPCRLALQGVRVQRVACGYAHTLVLTDEGQVYAWG 257


>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 393

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 164/418 (39%), Gaps = 98/418 (23%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  + GKL TWG        +    K    P         ++V+AA G  HC++V + 
Sbjct: 50  SLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQ 109

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSF--QKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
           G  Y WG  E          +G  G    +KD TGK                    ++R 
Sbjct: 110 GRAYAWGGNE----------YGQCGEEPERKDDTGK-------------------TLRRD 140

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
                R               +P LV       + +VAAGG H+++L+  G VW WG   
Sbjct: 141 IVIPQR--------------CAPKLV-------VRQVAAGGTHSVVLTREGHVWTWG--- 176

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
             Q      IK +  P  +  LE                           VK IA G  H
Sbjct: 177 --QPWPPGDIKQISVPVRVQGLEK--------------------------VKLIAVGAFH 208

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           +  + + G L  +G   YGQ G G T  + +P     L  + +  IAAG WH+  ++ +G
Sbjct: 209 NLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDG 268

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            VY +G  + G+LG G +   +     +  +L  +    +SCG  HS  LT+DG++ S+G
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFG 328

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIH---------------GFLPRNIACGWWHTLLLAE 463
              +G+LG G  +    P  VP                  ++ + +ACG  HTL + E
Sbjct: 329 RGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWIAKLVACGGRHTLAIVE 386



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 121/273 (44%), Gaps = 41/273 (15%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           C+V      K+  V AG R++L + D G+++ WG+   G LG  +  K    P  +  L 
Sbjct: 30  CVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALN 89

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
                          +VN         + + A GG H   V D G    +G   YGQCG 
Sbjct: 90  ---------------NVN---------IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 324 -----GSTNDQLRPSYA---SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
                  T   LR            + V Q+AAG  H+V ++ EG V+ +G         
Sbjct: 126 EPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWG----QPWPP 181

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G  +  +VP  ++      ++ K+++ GA H+  L EDG + +WG N+YGQLG GD+  R
Sbjct: 182 GDIKQISVPVRVQG----LEKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPR 237

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           + P  V  + G    +IA G WH+  L +  ++
Sbjct: 238 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 270



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 4/104 (3%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +  +G  + GQLG G+++ +    ++    LE  + + V  G+R+S  + +DG++ +WGW
Sbjct: 7   LIAWGAGEDGQLGIGINEEKEWVCVVNA--LEPYKVRSVVAGSRNSLAICDDGKLFTWGW 64

Query: 422 NKYGQLGL-GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           N+ G LG   ++   NIPS V  ++       A G WH L + +
Sbjct: 65  NQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDD 108



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 12/143 (8%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
           +  P   PIP +   G +  D+  GG   + A ++ G++  WG  +     +  + K  +
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSK 291

Query: 94  -TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
             P+   L     +V+ + G  H V++T+ G ++++G            D G  G  +K 
Sbjct: 292 MVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFG----------RGDHGRLGYGKKV 341

Query: 153 STGKQSALPTEQAPPSDKRAGEE 175
           +TG+   +PT+  PP      EE
Sbjct: 342 TTGQPVEVPTDIPPPKSLSGTEE 364


>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Papio anubis]
          Length = 1023

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 41/260 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  + L   +KI  V  G  H LILS  G+ + + Y                       
Sbjct: 87  TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYS---------------------- 124

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           ++H          +R  S+    K     + +I CG  HS  ++  G L  +G  L+GQ 
Sbjct: 125 MKH----------LRSESILQEKK-----IIQITCGDYHSLALSKGGELFAWGQNLHGQL 169

Query: 322 GHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
           G G        P     L  + + QI+AG  H++ +S+ G VY +G N+FGQLG G  ++
Sbjct: 170 GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTES 229

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           ++ P L+E   L++++ + ++CG  HSA+LT+DG + ++G  K+GQLG   + +   P L
Sbjct: 230 KDSPSLIEA--LDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCL 287

Query: 441 VP-IHGFLPRNIACGWWHTL 459
           V  + G     IACG WHTL
Sbjct: 288 VAELVGNRVTQIACGRWHTL 307



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 119/244 (48%), Gaps = 34/244 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G V+ WG    GQLGLG            
Sbjct: 178 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLG------------ 225

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               H  S KD P L+               V+ +ACGG HSA++T  G L TFG G +G
Sbjct: 226 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 272

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L+  +V QIA G WHT+  +S  G+V+ FG  + GQLG G  
Sbjct: 273 QLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 332

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRN 436
             + +P  L   +  S+  K+ S  +    ++   G   +L W   +   + L     R 
Sbjct: 333 LDQLIP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRT 386

Query: 437 IPSL 440
           IP+L
Sbjct: 387 IPTL 390



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 12/134 (8%)

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE----TP 390
           S L + ++ QI  G +H++ +S  G ++ +G N  GQLG G    +   P+++E     P
Sbjct: 132 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 191

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPR 449
           + +      +S G  HS  L+  G V SWG N++GQLGLG +  ++ PSL+  +      
Sbjct: 192 LAQ------ISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVE 245

Query: 450 NIACGWWHTLLLAE 463
            +ACG  H+ LL +
Sbjct: 246 FLACGGSHSALLTQ 259



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 128/307 (41%), Gaps = 65/307 (21%)

Query: 77  SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
           S+D +   Y  S KH  +     +  E  +++   G  H +++++ GE++ WG +     
Sbjct: 113 SSDGKPFEYDYSMKHLRSES---ILQEKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQ 168

Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-- 194
             V R F S       +T  Q        P +   AGE        S A   S N  S  
Sbjct: 169 LGVGRKFPS-------TTTPQIVEHLAGVPLAQISAGE------AHSMALSMSGNVYSWG 215

Query: 195 GDEFFTL---------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
            +EF  L         SP L+      K+  +A GG H+ +L+  G ++ +G G  GQLG
Sbjct: 216 KNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLG 275

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVV 304
                             ++   + RP LV +   N         V +IACG  H+ A V
Sbjct: 276 -----------------HNSTQNELRPCLVAELVGNR--------VTQIACGRWHTLAYV 310

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           +D G + +FG G  GQ G+G T DQL   P   SS  ++++E       HT   S +  +
Sbjct: 311 SDLGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLES------HT---SEKELI 361

Query: 363 YVFGGNQ 369
            + GGNQ
Sbjct: 362 MIAGGNQ 368


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  +ACG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVACGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D Q +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 116/262 (44%), Gaps = 38/262 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
            I  VA G  HTL L+D GQV+ WG   +GQLGL    + +  P  I  L        A 
Sbjct: 85  NIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144

Query: 268 GKDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAV 303
           G    L + + S       N  G+ G                       ++A GG HS V
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV 204

Query: 304 VTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           +T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  G  HT  ++ EG 
Sbjct: 205 LTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGG 262

Query: 362 VYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSW 419
           V+ FG   +GQLG      E  P K+ E   L       V+CG +H SA +   G++ S+
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQVACGRQHTSAFVPSSGRIYSF 319

Query: 420 GWNKYGQLGLGDSIDRNIPSLV 441
           G    GQLG G + +R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    V+CG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 117/288 (40%), Gaps = 41/288 (14%)

Query: 53  KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
           +++    CG A  LA ++ G++  WG  D +GQ  L   +     P      ++  +V+ 
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQV 142

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS----ALPTEQA 165
           A G+ H +++++A EV+ WG  +           G     QK ++ +       +P  Q 
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNK-------YGQLGLGIDCQKQTSPQLIKSLLGIPFMQV 195

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
                 +    +        R +       DE     P L+      KI  +  G  HT 
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 255

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            L+  G V+ +G GG GQLG  S      T H I           R +    GS+     
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI----- 295

Query: 286 AGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                V ++ACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 296 -----VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
          Length = 527

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 113/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L+P LV+ N  G ++T+V+ G  HT+ L+  G+V+ WGY   GQ+G GS     PTP  +
Sbjct: 116 LTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ-PTPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G   T+GWG  
Sbjct: 175 SSCLQNKV------------------------VVNIACGQLCSMAVLDNGE--TYGWGYN 208

Query: 319 --GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
             GQ G G+  +Q  P   ++L  I + Q+A G  HT+ ++ EG VY +G N +GQLGTG
Sbjct: 209 CNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTG 268

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
               + VP L+     + +  +V +C   H SA  T+ GQVL WG
Sbjct: 269 NKSNQAVPTLINMD--KERMVEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 122/251 (48%), Gaps = 28/251 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  + +  G KI  ++ G G H +I +  G+V+ WG+ G  QLG G+     
Sbjct: 57  GDTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGT----- 111

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
            T H +            P LV   S N  GK     V E++CG  H+  +T  G +  +
Sbjct: 112 -TNHGLT-----------PALV---STNLIGKR----VTEVSCGSHHTIALTTDGEVYAW 152

Query: 314 GWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G GST +Q  P   SS L +  V  IA G   ++ +   G  Y +G N  GQ
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQ 212

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G +  +  P       L+      V+CG  H+  LT++G V SWG N YGQLG G+ 
Sbjct: 213 LGLGNNGNQQTP--CRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNK 270

Query: 433 IDRNIPSLVPI 443
            ++ +P+L+ +
Sbjct: 271 SNQAVPTLINM 281



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 94/168 (55%), Gaps = 3/168 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H  + T  G +  +G   Y Q G+G+TN  L P+  S+ L+  +V +++ G  HT+ +
Sbjct: 84  GPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIAL 143

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G VY +G N  GQ+G+G    +  P+ + +  L++K    ++CG   S  + ++G+ 
Sbjct: 144 TTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSS-CLQNKVVVNIACGQLCSMAVLDNGET 202

Query: 417 LSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAE 463
             WG+N  GQLGLG++ ++  P  +  + G     +ACG+ HTL L +
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTD 250



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 4/154 (2%)

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVCISVEGRV 362
           VT    +   G    G  G G T   + P     L   ++  ++ G   H V  + +G V
Sbjct: 37  VTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEV 96

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           Y +G N + QLG G       P L+ T ++  KR   VSCG+ H+  LT DG+V +WG+N
Sbjct: 97  YAWGHNGYSQLGNGTTNHGLTPALVSTNLI-GKRVTEVSCGSHHTIALTTDGEVYAWGYN 155

Query: 423 KYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACG 454
             GQ+G G + ++  P  V   +   +  NIACG
Sbjct: 156 NSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACG 189



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 22/173 (12%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           VY WGY   G     S    P P R+      K V    CG   ++A  ++G+   WG  
Sbjct: 149 VYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           +  GQ  L +  + +TP         ++++ A G+AH +++T+ G VY+WG         
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWG--------- 258

Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
                  A S+ +  TG +S  A+PT      ++           TS+A+ +S
Sbjct: 259 -------ANSYGQLGTGNKSNQAVPTLINMDKERMVEVAACHTSHTSAAKTQS 304


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 126/252 (50%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   TL P  +      KI  ++ G G H ++ +  G+V+ WG+ G  QLG G+     
Sbjct: 57  GDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGT----- 111

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC               Q S N S K     V E+ACG  HS V+T  G +  
Sbjct: 112 -TNHGLVPC---------------QVSTNLSNKQ----VIEVACGSYHSLVLTSDGEVYA 151

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   +V +   G VYV+G N  G
Sbjct: 152 WGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNG 211

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 212 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGN 269

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 270 KSNQSYPTPVVV 281



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 111/224 (49%), Gaps = 32/224 (14%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC V+ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS         + 
Sbjct: 116 LVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVT 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            CL++                          V  IACG   S  V D G +  +G+   G
Sbjct: 176 GCLQNKV------------------------VVNIACGQMCSVAVVDTGEVYVWGYNGNG 211

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           Q G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG   
Sbjct: 212 QLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271

Query: 380 AENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
            ++ P    TP++  K    ++ +C + H SA  T+ G V  WG
Sbjct: 272 NQSYP----TPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P   S+ L + QV ++
Sbjct: 74  KKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEV 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G VY +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRV-TGCLQNKVVVNIACGQMC 192

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
           S  + + G+V  WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 193 SVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEG 252

Query: 466 QI 467
           Q+
Sbjct: 253 QV 254



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 42/238 (17%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG     G + L +G       P  
Sbjct: 65  PRRLDSLSDKKIACLSYGSGPHIILATTE-GEVFTWGH---NGYTQLGNGTTNHGLVPCQ 120

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEVY WG             + ++G     ST  
Sbjct: 121 VSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWG-------------YNNSGQVGSGSTAN 167

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
           Q A+P         +    +   +  S A  ++                 +SG++    +
Sbjct: 168 Q-AIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PT 223

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           PC V    G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++     PTP ++
Sbjct: 224 PCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 281



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           VY WGY   G     S     IP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 149 VYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWG 258


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 134/273 (49%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P L+      KI K+AA   G+H L LS  G+V+ WG G  G+LG G          
Sbjct: 432 TLAPMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGD--------- 482

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
                   A+  + P L+   S   +GK     V +IACG  +SA VT  G L T+G G 
Sbjct: 483 --------ATYLEEPALITTFSGKQTGKQ----VVQIACGSTYSAAVTADGELYTWGRGN 530

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D   P   ++L   +V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 531 YGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 590

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV +WG     +LG G     
Sbjct: 591 GGSDGCKTPKLVEK--LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHV 648

Query: 436 NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    +IA G  H L L +  ++
Sbjct: 649 RYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEV 681



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 134/304 (44%), Gaps = 78/304 (25%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH + L+  G+V+ WG G +G+LG  SR+                  
Sbjct: 3006 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3049

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L ++G G YG+ GHG    
Sbjct: 3050 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT 3100

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
            QLRP     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+P+ 
Sbjct: 3101 QLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3160

Query: 387  LET-----------------------------------------------PILESKRAKV 399
            +E                                                 I+E  R K 
Sbjct: 3161 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKK 3220

Query: 400  ---VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW 455
               V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG 
Sbjct: 3221 IVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGS 3280

Query: 456  WHTL 459
             H++
Sbjct: 3281 SHSV 3284



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------ 264
             + + +VA G +    ++  G+++  G    G+LGLG     +  P  I  L +      
Sbjct: 2953 ALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKV 3012

Query: 265  --AASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 3013 AVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3072

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L ++G G YG+ GHG    QLRP     L+  +V Q+A G     T+ ++ 
Sbjct: 3073 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD 3132

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 3133 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3190

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + ++ Q+
Sbjct: 3191 WGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQV 3240



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 3970 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4029

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   +  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4030 SLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4089

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4090 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4149

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4150 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4207

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4208 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4257



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 132/320 (41%), Gaps = 67/320 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG  E                      G  +  P ++  
Sbjct: 3985 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGNRSPCDRPR 4026

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
              +   G EVV     ++    S    +  E FT                 L P LV   
Sbjct: 4027 VIESLRGVEVVD---IAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDAL 4083

Query: 210  PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
             G ++  VA  +G   TL L+D   VW WG G  G+LG G                  + 
Sbjct: 4084 QGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-----------------GSD 4126

Query: 268  GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
            G   P+ +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +
Sbjct: 4127 GCKVPMKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4178

Query: 328  DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
               RP     L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+
Sbjct: 4179 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4238

Query: 388  ETPILESKRAKVVSCGARHS 407
                L+ K+   V+CG+ H+
Sbjct: 4239 AA--LQGKKINRVACGSAHT 4256



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 33/238 (13%)

Query: 195 GDEFFTLSPCLVTL----NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
           GD  +   P L+T       G ++ ++A G  ++  ++  G+++ WG G  G+LG GS  
Sbjct: 481 GDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSS- 539

Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAG 308
           + V TP L+  L+                       G+  V ++ACG     +  VT+ G
Sbjct: 540 EDVTTPMLVTALK-----------------------GQKVV-DVACGSGDAQTLAVTENG 575

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            + ++G G YG+ G G ++    P     L D+ + ++  G   +V ++ +G+VY +G  
Sbjct: 576 QVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG 635

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
              +LG G D+    PKLL++  L+ K+   ++ G+ H   LT++G+V SWG N   Q
Sbjct: 636 DNQRLGHGTDEHVRYPKLLDS--LQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQ 691



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 146/365 (40%), Gaps = 47/365 (12%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWA 114
             GG     A +  GK+   G A +       S    + P      +   V K A  +G  
Sbjct: 2960 AGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGR 3019

Query: 115  HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
            H +++T  G+V++WG            D G  G F + +  K   +   +       A  
Sbjct: 3020 HAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3069

Query: 175  EVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLI 226
                   TSS         E      GD    L P LV +  G ++ +VA G R   TL 
Sbjct: 3070 SSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 3129

Query: 227  LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
            L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G  
Sbjct: 3130 LTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG-- 3168

Query: 287  GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
                V +I CG + S  +T +G + T+G G Y + GHG+     +P     L   ++  +
Sbjct: 3169 ----VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHV 3224

Query: 347  AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
            A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+ H
Sbjct: 3225 AVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSH 3282

Query: 407  SAVLT 411
            S   T
Sbjct: 3283 SVAWT 3287



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP         A    RP+ +  G     +V + 
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVK-VPTPT-------EALATLRPVQLIGGEQTLFAVTAD 3946

Query: 284  GK----------------------------AGRSYVKEIAC--GGRHSAVVTDAGALLTF 313
            GK                                ++K++A   GG+H   ++  G + ++
Sbjct: 3947 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4006

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  ++V  IAAG  H+ CI+  G ++ +G  ++G+L
Sbjct: 4007 GEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRL 4066

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G G  + +  PKL++   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4067 GHGDSEDQLKPKLVDA--LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4124

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4125 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4158



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 116/241 (48%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2922 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2955

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G +   G    G+ G G ++  ++ P   S+L +  V+++A 
Sbjct: 2956 -VVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAV 3014

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3015 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3072

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA +T  G++ SWG  +YG+LG GD+  +  P LV +  G     +ACG      LA T 
Sbjct: 3073 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD 3132

Query: 466  Q 466
            +
Sbjct: 3133 E 3133



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 120/306 (39%), Gaps = 39/306 (12%)

Query: 106 VVKAAA--GWAHCVSVTEAGEVYTWGW----RECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           +VK AA     H ++++ +GEVY+WG     R     A    +     +F    TGKQ  
Sbjct: 446 IVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVV 505

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA- 218
               Q       +          +  R        G      +P LVT   G K+  VA 
Sbjct: 506 ----QIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVAC 561

Query: 219 -AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
            +G   TL +++ GQVW WG G  G+LG G                  + G   P LV  
Sbjct: 562 GSGDAQTLAVTENGQVWSWGDGDYGKLGRG-----------------GSDGCKTPKLVE- 603

Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
                  K     + ++ CG + S  +T  G + T+G G   + GHG+      P    S
Sbjct: 604 -------KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDS 656

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           L   +V  IA G  H + ++ EG V+ +G N   Q    +   +  PK L  P L SK  
Sbjct: 657 LQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDTLFPNKKQPKAL--PGLNSKHI 714

Query: 398 KVVSCG 403
             +SCG
Sbjct: 715 VGISCG 720



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 17/184 (9%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V +I C  +   +++ +GA+ T  +           +  L P     L   ++ ++AA  
Sbjct: 404 VTQIVCSEKVFLILSRSGAVYTQNY----------KSTTLAPMLIHGLSSRKIVKLAAHP 453

Query: 351 --WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV--SCGARH 406
              H + +S  G VY +G    G+LG G       P L+ T   +    +VV  +CG+ +
Sbjct: 454 DGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTY 513

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGW--WHTLLLAE 463
           SA +T DG++ +WG   YG+LG G S D   P LV  + G    ++ACG     TL + E
Sbjct: 514 SAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTE 573

Query: 464 TTQI 467
             Q+
Sbjct: 574 NGQV 577



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           D+    CG  F++A ++ G++ TWG  D++   + T  +H   P+         VV  A 
Sbjct: 609 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRYPKLLDSLQGKKVVDIAV 667

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++T+ GEV++WG
Sbjct: 668 GSTHCLALTDEGEVHSWG 685



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4148 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4206

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4207 CTEDGEVYTWG 4217



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 10/97 (10%)

Query: 38  ILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---- 92
           + +P+      G    DV CG G    LA +E+G++ +WG  D     Y   G+ G    
Sbjct: 542 VTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGC 596

Query: 93  ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           +TP+      +  +VK   G    V++T+ G+VYTWG
Sbjct: 597 KTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWG 633


>gi|146298949|ref|YP_001193540.1| regulator of chromosome condensation, RCC1 [Flavobacterium
           johnsoniae UW101]
 gi|146153367|gb|ABQ04221.1| regulator of chromosome condensation, RCC1 [Flavobacterium
           johnsoniae UW101]
          Length = 1679

 Score =  115 bits (288), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 105/408 (25%), Positives = 164/408 (40%), Gaps = 68/408 (16%)

Query: 52  WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK--- 108
           WK     G    +A    G L TWG+ +DEGQ          TP    +PT+        
Sbjct: 21  WK-TAAAGYSHTVAVRNDGTLWTWGN-NDEGQL------GNSTPAAINIPTKMGTANNWK 72

Query: 109 -AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
            AAAGW H V++   G ++ WG             +G  G     +      LP +    
Sbjct: 73  TAAAGWGHTVALKTDGTLWAWG-------------YGRLGQLGNGNYNTNFNLPQQIGTE 119

Query: 168 SDKRA-----GEEVVKRRKTSS---AREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
           +D +      G  V  +   +        S    +G  F   +P    +        ++A
Sbjct: 120 NDWQTIAAGHGHTVALKNDGTLWAWGNNFSGQLGNGTSFDRNTP--TKIGSDSNWLAISA 177

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           GG +T+ L   G +W WG    G LG G+      T + +P               +Q  
Sbjct: 178 GGLYTIALKKDGTLWAWGKNTYGTLGDGT-----TTNNRVP---------------KQIG 217

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
            ++  K        IA G  H+  + + G+L  +G   YG  G  +T D++ P+   +  
Sbjct: 218 TDTDWKT-------IAAGSDHTIAIKNDGSLWIWGKNTYGALGDNTTIDKIVPTKIGT-- 268

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           D   +    G+ +TV I  +G ++ +G N  G  G G      +  L+   I   K  ++
Sbjct: 269 DTDWKSAEGGVDYTVAIKTDGTLWAWGYNADGVFGNG----SKINSLIPVQIGTEKNWQM 324

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
           VS G+ H+  +  D  + SWG N YGQLG G SI++NIP+L+   G L
Sbjct: 325 VSGGSVHTVAVKTDESLWSWGNNSYGQLGDGTSIEKNIPTLLNCAGSL 372



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 92/378 (24%), Positives = 146/378 (38%), Gaps = 63/378 (16%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
           ++ WG    G     +P    IP ++   ++WK     G G  +A    G L  WG    
Sbjct: 40  LWTWGNNDEGQLGNSTPAAINIPTKMGTANNWK-TAAAGWGHTVALKTDGTLWAWGYGR- 97

Query: 81  EGQSYLTSGKHGETPEPFPLP----TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
                L    +G     F LP    TE      AAG  H V++   G ++ WG       
Sbjct: 98  -----LGQLGNGNYNTNFNLPQQIGTENDWQTIAAGHGHTVALKNDGTLWAWG------- 145

Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GEEVVKRRKTSSAREESENP 192
              +   G+  SF +++       PT+    S+  A    G   +  +K  +     +N 
Sbjct: 146 NNFSGQLGNGTSFDRNT-------PTKIGSDSNWLAISAGGLYTIALKKDGTLWAWGKNT 198

Query: 193 AS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
               GD   T +     +        +AAG  HT+ + + G +W WG    G LG  + I
Sbjct: 199 YGTLGDGTTTNNRVPKQIGTDTDWKTIAAGSDHTIAIKNDGSLWIWGKNTYGALGDNTTI 258

Query: 251 -KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
            K+VPT            G D      +G V+ +                  A+ TD G 
Sbjct: 259 DKIVPT----------KIGTDTDWKSAEGGVDYT-----------------VAIKTD-GT 290

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           L  +G+   G  G+GS  + L P    +  + Q+  ++ G  HTV +  +  ++ +G N 
Sbjct: 291 LWAWGYNADGVFGNGSKINSLIPVQIGTEKNWQM--VSGGSVHTVAVKTDESLWSWGNNS 348

Query: 370 FGQLGTGVDQAENVPKLL 387
           +GQLG G    +N+P LL
Sbjct: 349 YGQLGDGTSIEKNIPTLL 366


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 141/300 (47%), Gaps = 47/300 (15%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD      P LV       + +VA G  HT++LS+ G V+ WG G +G+LG
Sbjct: 14  RGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLG 73

Query: 246 LGSR-IKMVPTPHLIPCLE------------HAASGKDRPLLV--------RQGSVNSSG 284
            G    K VP   ++  LE            H A+  D+  L         + G  N SG
Sbjct: 74  HGDNGWKYVP--RIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESG 131

Query: 285 KAGRSYVK----------EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPS 333
                 VK          +IACG RH+ V+TD G + T+G    G  GH + +  Q  P 
Sbjct: 132 HPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPR 191

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
              SL    V Q+AA  +HT  ++  G ++ +G  +FG+LG G+++ + VP+++E   L 
Sbjct: 192 MLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEA--LM 249

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ-----------LGLGDSIDRNIPSLVP 442
            KR   V+CG  HSA + + G++ +WG  ++GQ           LG GD    ++P+LV 
Sbjct: 250 GKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVA 309



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 47/249 (18%)

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G V+ WG G +GQLGLG                   + +DRP+LV   ++ S G      
Sbjct: 7   GLVYSWGRGEDGQLGLGD-----------------TNDQDRPVLV--DALKSKG------ 41

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V ++ACG  H+ V+++ GA+ T+G G  G+ GHG    +  P    +L   ++ Q   G 
Sbjct: 42  VVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGS 101

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           +HT  ++ +G +Y +GG  +G+LG G +     P +++    E  R   ++CG+RH+ VL
Sbjct: 102 YHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVL 161

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI------------ACGWWHT 458
           T+ G+V +WG  + G +G  ++           H +LPR +            ACG +HT
Sbjct: 162 TDLGKVYTWGDKENGVVGHTNA---------DGHQYLPRMLESLQAKTVTQVAACG-FHT 211

Query: 459 LLLAETTQI 467
             L    +I
Sbjct: 212 AALTAAGEI 220



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 145/367 (39%), Gaps = 100/367 (27%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHC 116
           G G  +  SE G + TWG  DD     L  G +G    P          +V+A  G  H 
Sbjct: 48  GSGHTVVLSEDGAVYTWGRGDD---GRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHT 104

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
            +VT+ GE+YTWG                 G + K   G +S  PT              
Sbjct: 105 AAVTDKGELYTWG----------------GGMYGKLGHGNESGHPT-------------- 134

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVT--LNPGVKITKVAAGGRHTLILSDMGQVW 234
                                     PC+V    + G ++T++A G RHT++L+D+G+V+
Sbjct: 135 --------------------------PCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVY 168

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
            WG    G +G  +       P ++  L+                           V ++
Sbjct: 169 TWGDKENGVVGHTNADGHQYLPRMLESLQ------------------------AKTVTQV 204

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           A  G H+A +T AG + T+G G +G+ GHG   +Q+ P    +LM  +V  +A G +H+ 
Sbjct: 205 AACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSA 264

Query: 355 CI-----------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
            I              G+VY FG    G+LG G  +  +VP L+   +++    KV S  
Sbjct: 265 AILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLV-AGLVKMHVVKVASYN 323

Query: 404 ARHSAVL 410
             H+A L
Sbjct: 324 -EHTAAL 329



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           AG + ++G G  GQ G G TNDQ RP    +L    V Q+A G  HTV +S +G VY +G
Sbjct: 6   AGLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWG 65

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
               G+LG G +  + VP+++E   LE +R    +CG+ H+A +T+ G++ +WG   YG+
Sbjct: 66  RGDDGRLGHGDNGWKYVPRIVEA--LEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 427 LGLGDSIDRNIPSLVP---IHGFLPRNIACGWWHTLLLAETTQI 467
           LG G+      P +V      G     IACG  HT++L +  ++
Sbjct: 124 LGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKV 167



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           V G VY +G  + GQLG G    ++ P L++   L+SK    V+CG+ H+ VL+EDG V 
Sbjct: 5   VAGLVYSWGRGEDGQLGLGDTNDQDRPVLVDA--LKSKGVVQVACGSGHTVVLSEDGAVY 62

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           +WG    G+LG GD+  + +P +V  + G       CG +HT  + +  ++
Sbjct: 63  TWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGEL 113


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R  +                 D+
Sbjct: 3161 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3203

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P   RQ     + K     ++++ACG  HSA ++  G L T+G G YG+ GHG    QL+
Sbjct: 3204 P---RQVEALRAKK-----IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 3255

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++L   +V Q+A G     T+ ++ +G V+ +G   FG+LG G  +  + P  +E 
Sbjct: 3256 PKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIER 3315

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L       + CGA+ S  LT  G+V +WG   Y +LG G   D+++    PI G   R
Sbjct: 3316 --LSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLRGR 3371

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + ++ Q+
Sbjct: 3372 RVIHVAVGALHCLAVTDSGQV 3392



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 133/309 (43%), Gaps = 79/309 (25%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R+                   DR
Sbjct: 4311 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSY-----------------DR 4353

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV      S        V +IACG  HSA +T +G +LT+G G YG+ GHG + DQLR
Sbjct: 4354 PKLVEHLHGMS--------VADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLR 4405

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 4406 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 4465

Query: 390  --------------------------------------------------PILESKRAKV 399
                                                                L+ K+   
Sbjct: 4466 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4525

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            ++ G+ H    ++ G+V +WG N  GQLG G       P LV  + G     + CG  HT
Sbjct: 4526 IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHT 4585

Query: 459  LLLAETTQI 467
            L L+ T+Q+
Sbjct: 4586 LALS-TSQL 4593



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 32/271 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            T S  +  L P      +A G +   I+S  G+V+  G G  G+LGLG     VP PH +
Sbjct: 3099 TFSQTISRLRP----IHIAGGSKSLFIVSQEGRVFACGEGTNGRLGLGVTYN-VPLPHQL 3153

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            P L           +V++ +V+S              GG+H+  +T  G + ++G G  G
Sbjct: 3154 PVLHQ--------YVVKKVAVHS--------------GGKHALALTLDGKVFSWGEGEDG 3191

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            + GHG+     +P    +L   ++  +A G  H+  IS +G +Y +G  ++G+LG G + 
Sbjct: 3192 KLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3251

Query: 380  AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
             +  PKL+    L  +R   V+CG+R   +  LTEDG V SWG   +G+LG G S   + 
Sbjct: 3252 TQLKPKLVAA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT 3309

Query: 438  PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P  +  + G     I CG   +L L    ++
Sbjct: 3310 PHEIERLSGIGVIQIECGAQFSLALTRAGEV 3340



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 34/227 (14%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            ++GWG+   GQLG   GSRIK  PT    PC    A    RP+                 
Sbjct: 4226 IYGWGHNHRGQLGGLEGSRIK-TPT----PC---EALSLLRPV----------------- 4260

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--A 348
              ++A G +    VT  G L   G+G  G+ G G ++    P+   SL  + V+++A  +
Sbjct: 4261 --QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNS 4318

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G  H + ++ EG VY +G  + G+LG G   + + PKL+E   L       ++CG+ HSA
Sbjct: 4319 GGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEH--LHGMSVADIACGSAHSA 4376

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
             +T  GQVL+WG  +YG+LG GDS D+  P LV  + G+   +IACG
Sbjct: 4377 AITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4423



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 127/308 (41%), Gaps = 35/308 (11%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQA 165
            V   +G  HC+++T  GEVY WG  E        R         +   G   A +    A
Sbjct: 4314 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSA 4373

Query: 166  PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGRH 223
              +   A  +V+   K    R        GD    L P LV    G +   +A  +G   
Sbjct: 4374 HSAAITASGQVLTWGKGRYGRL-----GHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQ 4428

Query: 224  TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
            TL ++D   VW WG G  G+LG G                  + G   P  +        
Sbjct: 4429 TLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKLPYKIE------- 4464

Query: 284  GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              AG   +K + CG + S  +T +GA+ T+G G + + GHGS +   RP   ++L   ++
Sbjct: 4465 SLAGLGVIK-VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4523

Query: 344  EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
              IA G  H V  S  G VY +G N  GQLG G   A   P+L+    L+ K    V+CG
Sbjct: 4524 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSA--LQGKHIVKVTCG 4581

Query: 404  ARHSAVLT 411
            + H+  L+
Sbjct: 4582 SAHTLALS 4589



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 33/203 (16%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           GRH + +      + WG G + +LG G +  + VPT   I  LE                
Sbjct: 640 GRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTK--IAALE---------------- 681

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                   +  V+ + CG  +SAV+T  G LLT+G G Y + GHG+++D+  P+  ++L 
Sbjct: 682 --------QHCVQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALA 733

Query: 340 DIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           +  V  +A  +G  H++ ++ EG V+ +G   +G+LG G       P L+E+      R 
Sbjct: 734 EHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVES----LPRV 789

Query: 398 KVVSCGARHSAVLTEDGQVLSWG 420
           + +  G+++S  L+ +GQV +WG
Sbjct: 790 QRIFAGSQYSVALSSEGQVYTWG 812



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 145/377 (38%), Gaps = 80/377 (21%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
             GG       S+ G++   G   +     L  G     P P  LP     VVK  A   G
Sbjct: 3113 AGGSKSLFIVSQEGRVFACGEGTN---GRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSG 3169

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H +++T  G+V++WG                 G   K   G ++ L        DK  
Sbjct: 3170 GKHALALTLDGKVFSWG----------------EGEDGKLGHGNRTTL--------DKPR 3205

Query: 173  GEEVVKRRKTSSAREESENPAS--------------------GDEFFTLSPCLVTLNPGV 212
              E ++ +K       S + A+                    GD    L P LV    G 
Sbjct: 3206 QVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGR 3265

Query: 213  KITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
            ++ +VA G R   TL L++ G V+ WG G  G+LG G                  + G D
Sbjct: 3266 RVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG-----------------GSEGSD 3308

Query: 271  RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
             P  + +  ++  G      V +I CG + S  +T AG + T+G G Y + GHG      
Sbjct: 3309 TPHEIER--LSGIG------VIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVR 3360

Query: 331  RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            +P     L   +V  +A G  H + ++  G+VY +G N  GQ G+G       P L+   
Sbjct: 3361 KPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTFVNKKPALVIG- 3419

Query: 391  ILESKRAKVVSCGARHS 407
             L+      V+CG+ HS
Sbjct: 3420 -LDDVFVNRVACGSSHS 3435



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+++ ++  ++   IA G      +S EGRV+  G    G+LG GV    NVP   + P+
Sbjct: 3098 PTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEGTNGRLGLGV--TYNVPLPHQLPV 3155

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT DG+V SWG  + G+LG G+    + P  V  +     
Sbjct: 3156 LHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRQVEALRAKKI 3215

Query: 449  RNIACGWWHT 458
            R++ACG  H+
Sbjct: 3216 RDVACGSSHS 3225



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 43/223 (19%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCL-EHAASGKDR 271
           +  V  G  ++ +++  G +  WG G   +LG G S  + +PT  L+  L EH       
Sbjct: 685 VQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPT--LVAALAEHT------ 736

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                              V ++A G    HS  +T  G +  +G G YG+ G+G+ N  
Sbjct: 737 -------------------VVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGS 777

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG-----GNQFGQLGTGVDQAENVP 384
           L+P    SL   +V++I AG  ++V +S EG+VY +G     G+Q  +      Q  +VP
Sbjct: 778 LQPILVESLP--RVQRIFAGSQYSVALSSEGQVYTWGKATCLGHQLVERSV---QGCSVP 832

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           +L+ +  L+ KR   ++ G  H   L+  G+V  WG N   Q+
Sbjct: 833 RLVSS--LQHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQV 873



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 7/187 (3%)

Query: 285 KAGRSYVKEIA--CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
           +AG      IA  C GRH   +       ++G G   + GHG T+ +  P+  ++L    
Sbjct: 625 EAGHETFISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHC 684

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
           V+ +  G  ++  I+  G +  +G   + +LG G      +P L+      +     +  
Sbjct: 685 VQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGS 744

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLL 460
           G  HS  LT +G V +WG   YG+LG G+      P LV     LPR   I  G  +++ 
Sbjct: 745 GDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE---SLPRVQRIFAGSQYSVA 801

Query: 461 LAETTQI 467
           L+   Q+
Sbjct: 802 LSSEGQV 808



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 78/222 (35%), Gaps = 66/222 (29%)

Query: 46   LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
            L G  +    CG G    L  ++   + +WG  D     Y   G+ G      P   E+ 
Sbjct: 4412 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4466

Query: 105  ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
                V+K   G    V++T++G VYTWG            DF   G    D         
Sbjct: 4467 AGLGVIKVECGSQFSVALTKSGAVYTWG----------KGDFHRLGHGSVDH-------- 4508

Query: 162  TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
                           V+R K  +A +                       G KI  +A G 
Sbjct: 4509 ---------------VRRPKKVAALQ-----------------------GKKIISIATGS 4530

Query: 222  RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             H +  SD G+V+ WG   EGQLG G+ +  +  P L+  L+
Sbjct: 4531 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVSALQ 4571



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 44/221 (19%)

Query: 204 CLVTLNPGV---KITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           CL TL   +    +  VA  +G  H+L L+  G V+ WG G  G+LG G+          
Sbjct: 724 CLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGN---------- 773

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
                   +G  +P+LV               V+ I  G ++S  ++  G + T  WG  
Sbjct: 774 -------CNGSLQPILVE----------SLPRVQRIFAGSQYSVALSSEGQVYT--WGKA 814

Query: 319 GQCGHGSTNDQLR----PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GH      ++    P   SSL   ++  +A G+ H + +S  G V+ +G N   Q+ 
Sbjct: 815 TCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQVC 874

Query: 375 TGVDQAENVPKLLETPI---LESKRAKVVSCGARHSAVLTE 412
                +E    LL +PI   L +  A  ++C A  S + T+
Sbjct: 875 PSSVSSE---PLLRSPILVALPTLPASGIACTAGQSLIWTQ 912



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
            G  +++A S  G++ TWG A   G   +     G   P          +V  A G AHC
Sbjct: 794 AGSQYSVALSSEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHC 853

Query: 117 VSVTEAGEVYTWGWREC 133
           ++++ +GEV+ WG  +C
Sbjct: 854 LALSSSGEVFGWGRNDC 870


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R  +                 D+
Sbjct: 1919 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 1961

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV   ++ S        ++++ACG  HSA ++  G L T+G G YG+ GHG    QL+
Sbjct: 1962 PRLVE--TLRSKK------IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 2013

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++L   +V Q+A G     T+ ++ +G V+ +G   FG+LG G  +  + P  +E 
Sbjct: 2014 PKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIER 2073

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L       + CGA+ S  LT  G+V +WG   Y +LG G   D+++    PI G   R
Sbjct: 2074 --LSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLRGR 2129

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + +  Q+
Sbjct: 2130 RVIHVAVGALHCLAVTDAGQV 2150



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 131/260 (50%), Gaps = 32/260 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R+                   DR
Sbjct: 3064 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 3106

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV    +N         V +IACG  HSA +T +G +LT+G G YG+ GHG + DQLR
Sbjct: 3107 PKLVEH--LNGMN------VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 3158

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 3159 PQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 3218

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID--RNIPSLVPIHGFL 447
              L       V CG++ S  LT+ G V +W    + +LG G S+D  R    +  + G  
Sbjct: 3219 --LAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHG-SVDHVRRPKKVAALQGKK 3275

Query: 448  PRNIACGWWHTLLLAETTQI 467
              +IA G  H +  +++ ++
Sbjct: 3276 IISIATGSLHCVACSDSGEV 3295



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 128/271 (47%), Gaps = 32/271 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            T S  +  L P      +A G +   I+   G+V+  G G  G+LGLG     VP PH +
Sbjct: 1857 TFSQTISRLRP----IHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGV-THNVPLPHQL 1911

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            P L           +V++ +V+S              GG+H+  +T  G + ++G G  G
Sbjct: 1912 PVLHQ--------YVVKKVAVHS--------------GGKHALALTLDGKVFSWGEGEDG 1949

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            + GHG+     +P    +L   ++  +A G  H+  IS +G +Y +G  ++G+LG G + 
Sbjct: 1950 KLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 2009

Query: 380  AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
             +  PKL+    L  +R   V+CG+R   +  LTEDG V SWG   +G+LG G S   + 
Sbjct: 2010 TQLKPKLVAA--LAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDT 2067

Query: 438  PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P  +  + G     I CG   +L L    ++
Sbjct: 2068 PHEIERLSGIGVIQIECGAQFSLALTRAGEV 2098



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 114/227 (50%), Gaps = 34/227 (14%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            ++GWG+   GQLG   GSRIK  PT    PC    A    RP+                 
Sbjct: 2979 IYGWGHNHRGQLGGLEGSRIK-TPT----PC---EALSLLRPV----------------- 3013

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--A 348
              ++A G +    VT  G L   G+G  G+ G G  +    P+   SL  + V+++A  +
Sbjct: 3014 --QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNS 3071

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G  H + ++ EG VY +G  + G+LG G   + + PKL+E   L       ++CG+ HSA
Sbjct: 3072 GGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH--LNGMNVADIACGSAHSA 3129

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
             +T  G VL+WG  +YG+LG GDS D+  P LV  + G+   +IACG
Sbjct: 3130 AITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACG 3176



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 125/308 (40%), Gaps = 35/308 (11%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQA 165
            V   +G  HC+++T  GEVY WG  E        R         +   G   A +    A
Sbjct: 3067 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSA 3126

Query: 166  PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGRH 223
              +   A   V+   K    R        GD    L P LV    G +   +A  +G   
Sbjct: 3127 HSAAITASGHVLTWGKGRYGRL-----GHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQ 3181

Query: 224  TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
            TL ++D   VW WG G  G+LG G                  + G   P  +        
Sbjct: 3182 TLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKLPYKI-------E 3217

Query: 284  GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              AG   +K + CG + S  +T +GA+ T+  G + + GHGS +   RP   ++L   ++
Sbjct: 3218 SLAGLGVIK-VECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKI 3276

Query: 344  EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
              IA G  H V  S  G VY +G N  GQLG G   A   P+L+    L+ K    V+CG
Sbjct: 3277 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCG 3334

Query: 404  ARHSAVLT 411
            + H+  L+
Sbjct: 3335 SAHTLALS 3342



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 147/367 (40%), Gaps = 60/367 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
             GG        ++GK+   G   +     L  G     P P  LP     VVK  A   G
Sbjct: 1871 AGGSKSLFIVGQNGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 1927

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H +++T  G+V++WG  E           G  G   + +  K   + T ++    K+ 
Sbjct: 1928 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVETLRS----KKI 1973

Query: 173  GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
             +       +++   + E              GD    L P LV    G ++ +VA G R
Sbjct: 1974 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSR 2033

Query: 223  --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
               TL L++ G V+ WG G  G+LG G                  + G D P  + +  +
Sbjct: 2034 DAQTLALTEDGSVFSWGDGDFGKLGRG-----------------GSEGSDTPHEIER--L 2074

Query: 281  NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
            +  G      V +I CG + S  +T AG + T+G G Y + GHG      +P     L  
Sbjct: 2075 SGIG------VIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRG 2128

Query: 341  IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
             +V  +A G  H + ++  G+VY +G N  GQ G+G       P L+    L++     V
Sbjct: 2129 RRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG--LDAVFVNRV 2186

Query: 401  SCGARHS 407
            +CG+ HS
Sbjct: 2187 ACGSSHS 2193



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+++ ++  ++   IA G      +   G+VY  G    G+LG GV    NVP   + P+
Sbjct: 1856 PTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGV--THNVPLPHQLPV 1913

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT DG+V SWG  + G+LG G+    + P LV  +     
Sbjct: 1914 LHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKI 1973

Query: 449  RNIACGWWHT 458
            R++ACG  H+
Sbjct: 1974 RDVACGSSHS 1983



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TW   D     +  S  H   P+         ++  A G  HCV+
Sbjct: 3230 GSQFSVALTKSGAVYTWSKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 3288

Query: 119  VTEAGEVYTWG 129
             +++GEVYTWG
Sbjct: 3289 CSDSGEVYTWG 3299


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 126/268 (47%), Gaps = 45/268 (16%)

Query: 198 FFTLSPC----LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
            F+ S C     + L   +KI  V  G  H LILS  G+ + + Y               
Sbjct: 319 LFSYSFCDSRECIKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYS-------------- 364

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
                   +EHA        ++++ S+            +I CG  HS  ++  G L  +
Sbjct: 365 --------IEHARFQ----CILQEKSI-----------IQITCGDYHSLALSKGGELFAW 401

Query: 314 GWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G  L+GQ G G     +  P     L  + + QI+AG  H++ +S+ G +Y +G N  GQ
Sbjct: 402 GQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQ 461

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G    E+ P L+E   L++++ + ++CG  H+A+LT+DG V ++G  KYGQLG   +
Sbjct: 462 LGLGHTNGEDFPSLIEA--LDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNST 519

Query: 433 IDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            +   P LV  + G     +ACG WHTL
Sbjct: 520 QNELRPRLVTELAGNRVTQVACGRWHTL 547



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 123/258 (47%), Gaps = 37/258 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI------PCLEHAAS 267
           I ++  G  H+L LS  G+++ WG    GQLG+G     +PTP L+      P ++ +A 
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 438

Query: 268 GKDRPLLVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVVT 305
                 L   G++     N  G+ G  +                 V+ +ACGG H+A++T
Sbjct: 439 KAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLT 498

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYV 364
             G + TFG G YGQ GH ST ++LRP   + L   +V Q+A G WHT+  +S  G+V+ 
Sbjct: 499 KDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDLGKVFS 558

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWN 422
           FG  + GQLG G    + +P  ++ P   ++  K  S  +    ++   G   +L W   
Sbjct: 559 FGSGKEGQLGNGGTHNQLIPLPMKLP--SNEELKFESRTSEKELIMIAGGNQSILLWMGK 616

Query: 423 KYGQLGLGDSIDRNIPSL 440
           K   + L     R IP+L
Sbjct: 617 KNPYVNL----RRRIPTL 630



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 12/132 (9%)

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLE----TPIL 392
           L +  + QI  G +H++ +S  G ++ +G N  GQLG G +  +   P+L+E     P++
Sbjct: 374 LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLV 433

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI 451
           +      +S G  HS  L+  G + SWG N  GQLGLG +   + PSL+  +       +
Sbjct: 434 Q------ISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFL 487

Query: 452 ACGWWHTLLLAE 463
           ACG  HT LL +
Sbjct: 488 ACGGSHTALLTK 499



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 52/237 (21%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVV 107
           K +    CG   +LA S+ G+L  WG  +  GQ  L  G+      TP+     +   +V
Sbjct: 377 KSIIQITCGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRLFTSIPTPQLVEHLSGVPLV 433

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR-------------------ECVPSAKVTRDFGSAGS 148
           + +AG AH ++++ +G +Y+WG                     E + + KV  +F + G 
Sbjct: 434 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKV--EFLACG- 490

Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
                 G  +AL T+        AG      +        ++N         L P LVT 
Sbjct: 491 ------GSHTALLTKDGLVFTFGAG------KYGQLGHNSTQN--------ELRPRLVTE 530

Query: 209 NPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPCLE 263
             G ++T+VA G  HTL  +SD+G+V+ +G G EGQLG  G+  +++P P  +P  E
Sbjct: 531 LAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNE 587


>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
           latipes]
          Length = 527

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 111/223 (49%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L+P LV+ N  G ++T+VA G  HT+ L+  G+V+ WGY   GQ+G GS     PTP  +
Sbjct: 116 LTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQ-PTPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL+                           V  + CG   S  V D G +  +G+   
Sbjct: 175 SSCLQ------------------------SKVVVNVGCGQLCSMAVLDNGEIYGWGYNCN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G+  +Q  P   ++L  + V Q+A G  HT+ ++ EG VY +G N +GQLGTG  
Sbjct: 211 GQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNK 270

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             + +P L+ T   + +  +V +C   H SA  T+ GQVL WG
Sbjct: 271 SNQALPTLINTD--KERMVEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 121/249 (48%), Gaps = 28/249 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  + +  G KI  ++ G G H +I +  G+V+ WG+ G  QLG G+     
Sbjct: 57  GDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVFAWGHNGYSQLGNGT----- 111

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
            T H +            P LV   S N  GK     V E+ACG  H+  +T  G +  +
Sbjct: 112 -TNHGLT-----------PALV---STNLLGKR----VTEVACGSHHTIALTADGEVFAW 152

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVE-QIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G GST +Q  P   SS +  +V   +  G   ++ +   G +Y +G N  GQ
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQ 212

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G +  +  P       L+      V+CG  H+  LT++G V +WG N YGQLG G+ 
Sbjct: 213 LGLGNNGNQQTP--CRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNK 270

Query: 433 IDRNIPSLV 441
            ++ +P+L+
Sbjct: 271 SNQALPTLI 279



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 94/168 (55%), Gaps = 3/168 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H  + T  G +  +G   Y Q G+G+TN  L P+  S+ L+  +V ++A G  HT+ +
Sbjct: 84  GPHVVIATADGEVFAWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIAL 143

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    +  P+ + +  L+SK    V CG   S  + ++G++
Sbjct: 144 TADGEVFAWGYNNSGQVGSGSTANQPTPRRVSS-CLQSKVVVNVGCGQLCSMAVLDNGEI 202

Query: 417 LSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAE 463
             WG+N  GQLGLG++ ++  P  +  + G     +ACG+ HTL L +
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTD 250



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 4/167 (2%)

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVCISVEGRV 362
           VT    +   G    G  G G     + P     L   ++  ++ G   H V  + +G V
Sbjct: 37  VTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEV 96

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           + +G N + QLG G       P L+ T +L  KR   V+CG+ H+  LT DG+V +WG+N
Sbjct: 97  FAWGHNGYSQLGNGTTNHGLTPALVSTNLL-GKRVTEVACGSHHTIALTADGEVFAWGYN 155

Query: 423 KYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
             GQ+G G + ++  P  V   +   +  N+ CG   ++ + +  +I
Sbjct: 156 NSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEI 202



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 22/173 (12%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    P P R+      K V   GCG   ++A  ++G++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           +  GQ  L +  + +TP         +VV+ A G+AH +++T+ G VY WG         
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWG--------- 258

Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
                  A S+ +  TG +S  ALPT      ++           TS+A+ +S
Sbjct: 259 -------ANSYGQLGTGNKSNQALPTLINTDKERMVEVAACHTSHTSAAKTQS 304


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 122/253 (48%), Gaps = 30/253 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           IT++A G RH++ LS+ GQV+ WG    GQLG  S   +V  P ++           R L
Sbjct: 88  ITQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIV-----------RNL 136

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-- 331
           + +              V +IACG  HS  +T  G L ++G  LYGQ G  S ND  +  
Sbjct: 137 VSKT-------------VVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSN 183

Query: 332 -PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P   ++L+ I V  IA G  H+  IS    V+ +G N  GQLG   +     P  L+T 
Sbjct: 184 TPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKT- 242

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPR 449
            L +   + V+CG   S  LT +G V + G   YGQLG G S +  +P +V  + G    
Sbjct: 243 -LRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTIS 301

Query: 450 NIACGWWHTLLLA 462
            +ACG  HTL L 
Sbjct: 302 QVACGNRHTLALV 314



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 119/259 (45%), Gaps = 34/259 (13%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L+P  +   P   + ++A G RHTL L+  G+V+  G     QLG           H +P
Sbjct: 25  LTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGSNDYSQLG-----------HELP 73

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                     RPL + +             + +IACG RHS  +++ G + ++G    GQ
Sbjct: 74  --------TKRPLQIPE--------LQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQ 117

Query: 321 CGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD- 378
            GH S  D ++ P    +L+   V QIA G  H++ ++  G +Y +G N +GQLG     
Sbjct: 118 LGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPN 177

Query: 379 --QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
             Q  N P  L T  L       ++CG  HS ++++   V  WG N  GQLGL D  +R 
Sbjct: 178 DLQQSNTPMRLTT--LLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 437 IPS-LVPIHGFLPRNIACG 454
            P+ L  +     R +ACG
Sbjct: 236 YPTQLKTLRTLGVRFVACG 254



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 164/392 (41%), Gaps = 68/392 (17%)

Query: 34  EKSPILSP--IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
           E+  IL+P  IP +    DS  +    G    L  + SGK+   GS D     Y   G  
Sbjct: 20  EEEQILTPSRIPWK---PDSAVNQIACGHRHTLFLTASGKVYACGSND-----YSQLGHE 71

Query: 92  GETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWGWREC-----------VPSAK 138
             T  P  +P   +  + + A G  H ++++E G+V++WG  EC           V   K
Sbjct: 72  LPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPK 131

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
           + R+  S    Q       S   T          G  +  +   SS  +  ++       
Sbjct: 132 IVRNLVSKTVVQIACGSNHSLALT--CCGELYSWGSNLYGQLGVSSPNDLQQSN------ 183

Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
              +P  +T   G+ ++ +A GG H+ ++S    V+GWG    GQLGL            
Sbjct: 184 ---TPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE--------- 231

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
                      +R    +  ++ + G      V+ +ACG   S  +T  G + T G G Y
Sbjct: 232 ----------TNRAYPTQLKTLRTLG------VRFVACGDEFSVFLTIEGGVFTCGAGAY 275

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGV 377
           GQ GHG +++++ P     LM   + Q+A G  HT+  +   GR+Y FG    GQLGT  
Sbjct: 276 GQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRN 335

Query: 378 DQAENVPKLLETP--------ILESKRAKVVS 401
            ++ N+P+L+  P        +L+S  AK+ S
Sbjct: 336 TKSLNLPQLVIGPWVSPSGSTLLQSNDAKIAS 367



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 115/242 (47%), Gaps = 34/242 (14%)

Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           +++ WG    GQLGLG    + + TP  IP    +A                        
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSA------------------------ 37

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V +IACG RH+  +T +G +   G   Y Q GH       RP     L D  + QIA G 
Sbjct: 38  VNQIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTK--RPLQIPELQDYVITQIACGS 95

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+V+ +G N+ GQLG   DQ    +PK++    L SK    ++CG+ HS  
Sbjct: 96  RHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRN--LVSKTVVQIACGSNHSLA 153

Query: 410 LTEDGQVLSWGWNKYGQLGL---GDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLAETT 465
           LT  G++ SWG N YGQLG+    D    N P  L  + G     IACG  H+ L+++++
Sbjct: 154 LTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSS 213

Query: 466 QI 467
            +
Sbjct: 214 AV 215


>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
          Length = 957

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 124/244 (50%), Gaps = 34/244 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G ++ WG    GQLGLG            
Sbjct: 112 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 159

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               H  S KD P L+ +G  N         V+ +ACGG HSA++T  G L TFG G +G
Sbjct: 160 ----HTES-KDYPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 206

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L++ +V QIA G WHT+  +S  G+V+ FG  + GQLG G  
Sbjct: 207 QLGHNSTQNELRPCLVAELVEYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 266

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRN 436
           + + +P  L   +  S+  K+ S  +    ++   G   +L W   +   + L     R 
Sbjct: 267 RDQLMP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRT 320

Query: 437 IPSL 440
           IP+L
Sbjct: 321 IPTL 324



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 4/157 (2%)

Query: 305 TDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           T +G L  +G  L+GQ G G        P     L  + + QI+AG  H++ +S+ G +Y
Sbjct: 87  TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 146

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
            +G N+FGQLG G  ++++ P L+E   L++++ + V+CG  HSA+LT+DG + ++G  K
Sbjct: 147 SWGKNEFGQLGLGHTESKDYPSLIEG--LDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 204

Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           +GQLG   + +   P LV  +  +    IACG WHTL
Sbjct: 205 HGQLGHNSTQNELRPCLVAELVEYRVTQIACGRWHTL 241



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 14/129 (10%)

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE----TPILESK 395
           +QV Q+ AG       S  G ++ +G N  GQLG G    +   P+++E     P+ +  
Sbjct: 73  VQVHQLLAGSGGARTPS--GELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQ-- 128

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
               +S G  HS  L+  G + SWG N++GQLGLG +  ++ PSL+  +       +ACG
Sbjct: 129 ----ISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACG 184

Query: 455 WWHTLLLAE 463
             H+ LL +
Sbjct: 185 GSHSALLTQ 193


>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 1598

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 132/263 (50%), Gaps = 35/263 (13%)

Query: 210  PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
            P  ++ ++A G RHT +++D   ++ +G+G  G+LG G+            C +    G 
Sbjct: 1242 PLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEED---------CTDPIPVGY 1292

Query: 270  DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
               L+  +G V   G      V +++CG  H+ VVT  G L  FGWG  G+ G G T   
Sbjct: 1293 FTSLIAAEG-VEFGG------VVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSS 1345

Query: 330  LRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            L PS     +D++ +  +A G  HT+ ++ +GRV+ FG    G+LG G +  E +P L+E
Sbjct: 1346 LYPSR----VDLRNIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVE 1401

Query: 389  TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP------ 442
               LE      ++ G  HS  L+ DG+VL+WG+   G LG G   +  IP+LV       
Sbjct: 1402 G--LEEYSIVAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNP 1459

Query: 443  -----IHGF-LPRNIACGWWHTL 459
                 IH   +  ++ACG +HTL
Sbjct: 1460 NVETLIHDISVVTSVACGSYHTL 1482



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 107/257 (41%), Gaps = 42/257 (16%)

Query: 214  ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
            +  V+ G  HT++++  G ++G+G+G  G+LG G                          
Sbjct: 1307 VVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGE------------------------- 1341

Query: 274  LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                GS     +     +  +ACG  H+  +T  G +  FG G  G+ G+GS  D+  P 
Sbjct: 1342 ---TGSSLYPSRVDLRNIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPF 1398

Query: 334  YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL------- 386
                L +  +  IAAG  H+  +S +G V  +G    G LG G      +P L       
Sbjct: 1399 LVEGLEEYSIVAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTN 1458

Query: 387  --LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
              +ET I +      V+CG+ H+   T DG +  WG    GQLG      +++  L P  
Sbjct: 1459 PNVETLIHDISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKE 1518

Query: 445  GFLP-----RNIACGWW 456
              LP     R IACG +
Sbjct: 1519 IRLPTSSGIRGIACGTF 1535



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 342  QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ--AENVPKLLETPILESKRAKV 399
            +V QIA G  HT  I+ +  +Y FG  + G+LG G ++   + +P    T ++ ++  + 
Sbjct: 1245 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEF 1304

Query: 400  -----VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACG 454
                 VSCG  H+ V+T +G +  +GW + G+LG G++     PS V +       +ACG
Sbjct: 1305 GGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVDLRNIAA--VACG 1362

Query: 455  WWHTLLL 461
              HTL L
Sbjct: 1363 REHTLAL 1369



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 27/217 (12%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P LV       I  +AAG  H+  LS  G+V  WG+G  G LG G+R        LIP L
Sbjct: 1397 PFLVEGLEEYSIVAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNC-----LIPTL 1451

Query: 263  EHAA-SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYG 319
                 +  +   L+   SV          V  +ACG  H+   T+ G L  +GWG    G
Sbjct: 1452 VDGPWTNPNVETLIHDISV----------VTSVACGSYHTLAATNDGVL--YGWGDAAAG 1499

Query: 320  QCG--HGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
            Q G  H S  D   L P          +  IA G + +   S +G+++++G    G  G 
Sbjct: 1500 QLGAEHLSAQDLVVLSPKEIRLPTSSGIRGIACGTFTSAVCSTQGQLFMWGSPAAGN-GA 1558

Query: 376  GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
             +D  +   K     +L       ++CGA H+  +T 
Sbjct: 1559 PLDVEDAHVK--RVGVLGEFEFSQIACGAYHAVAITR 1593


>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 292

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 122/260 (46%), Gaps = 33/260 (12%)

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
           +N   K+  V+ G  H+ + ++   V  WG G  G+LG G  I                 
Sbjct: 62  INIKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLGTGDEIS---------------- 105

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
            + +P+L                V +I+CG   +AV+T AG + TFG G YG+ GHG+ +
Sbjct: 106 -RTQPVLPEH------------KVAQISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDS 152

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           +QL P     L   +V  ++ G  H   +++EG V+ +G    G+LG G ++    P L+
Sbjct: 153 NQLVPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSERDSKKPVLV 212

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVP-IHG 445
           +   +    A  V CG  H  V T DG++  WGWN YGQ GLG  ++  + P LV  + G
Sbjct: 213 KG--MNGLVALTVECGGYHMGVTTLDGELYMWGWNVYGQCGLGLHVENQLTPVLVEQLRG 270

Query: 446 FLPRNIACGWWHTLLLAETT 465
                +ACG  HT+ L    
Sbjct: 271 KRVLMVACGESHTMALVSNN 290



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 122/240 (50%), Gaps = 25/240 (10%)

Query: 232 QVWGWGYGGEGQLGL-----GSRIKMVPT----PHLIPCLEHAASGKDRPLLVRQGSVNS 282
            V+ WG G  GQLG      GS  + V      P +I  + +  SG+     +  G+ N 
Sbjct: 1   MVFSWGLGNGGQLGHHDEENGSFPREVSALRKKPSVIIAVGNGESGR-----LGLGNENC 55

Query: 283 SGKAGRSYVKE----IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
                R  +K+    ++CG  HSAV T+A  +LT+G G  G+ G G    + +P     L
Sbjct: 56  CNIPKRINIKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLGTGDEISRTQP----VL 111

Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
            + +V QI+ G   T  +++ G+V+ FG   +G+LG G D  + VPKL+E   L+++R  
Sbjct: 112 PEHKVAQISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDSNQLVPKLVEE--LDTERVV 169

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWH 457
            +SCGA H A L  +G V +WG    G+LG G   D   P LV  ++G +   + CG +H
Sbjct: 170 SLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSERDSKKPVLVKGMNGLVALTVECGGYH 229



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 101/265 (38%), Gaps = 42/265 (15%)

Query: 97  PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           P  +  +  VV  + G  H    TEA  V TWG              G  G+  + S   
Sbjct: 59  PKRINIKKKVVGVSCGDEHSAVFTEANTVLTWG----------NGTGGRLGTGDEISR-T 107

Query: 157 QSALPTEQAPP----SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
           Q  LP  +       SD  A   +  +  T       +    G++   L P LV      
Sbjct: 108 QPVLPEHKVAQISCGSDWTAVLTLAGKVFTFGVGSYGK-LGHGNDSNQLVPKLVEELDTE 166

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           ++  ++ G  H   L+  G V+ WG GG G+LG GS                      +P
Sbjct: 167 RVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSE-----------------RDSKKP 209

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLR 331
           +LV+       G  G   +  + CGG H  V T  G L  +GW +YGQCG G    +QL 
Sbjct: 210 VLVK-------GMNGLVALT-VECGGYHMGVTTLDGELYMWGWNVYGQCGLGLHVENQLT 261

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCI 356
           P     L   +V  +A G  HT+ +
Sbjct: 262 PVLVEQLRGKRVLMVACGESHTMAL 286


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 118/259 (45%), Gaps = 28/259 (10%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L+    G  I  VA G  H++ LSD GQV+ WG G +GQLGL +    V  P LI   
Sbjct: 75  PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK-- 132

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                 K  +  + +I+CG  H   +   G   T+G   YGQ G
Sbjct: 133 ----------------------KLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLG 170

Query: 323 HGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G     Q  P    SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++  
Sbjct: 171 LGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR 230

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SL 440
             P      +L S++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  +
Sbjct: 231 ESP--CHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 441 VPIHGFLPRNIACGWWHTL 459
           + + G     IACG  HTL
Sbjct: 289 LELMGSEVSQIACGRHHTL 307



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 144/335 (42%), Gaps = 85/335 (25%)

Query: 46  LCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPT 102
           L G  + + +    CG   ++A S+ G++ +WG+  D GQ  LT+ +   T P       
Sbjct: 77  LIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLN 135

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           + ++++ + G  HC+++   G+ +TWG             +G  G       GK+   P+
Sbjct: 136 QQTILQISCGNWHCLALAADGQFFTWG----------QNSYGQLG------LGKEC--PS 177

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
           + +P           +R K+                            G+ + +VAAGG 
Sbjct: 178 QASP-----------QRVKSLD--------------------------GIPLAQVAAGGA 200

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           H+  LS  G V+GWG    GQLGL                      ++ P  V+   +  
Sbjct: 201 HSFALSLSGAVFGWGKNSSGQLGLSDE-----------------RDRESPCHVK---LLR 240

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
           S K     V  I+CG  H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +
Sbjct: 241 SQK-----VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSE 295

Query: 343 VEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTG 376
           V QIA G  HT+  +   G +Y FG    GQLGTG
Sbjct: 296 VSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 96/197 (48%), Gaps = 30/197 (15%)

Query: 236 WGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
           WGY   GQ G+GS ++ ++P P +   +       DR                   VKE+
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIH------DRN------------------VKEV 39

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           ACGG HS  + + G + T G    GQ GH S     +P    +L    +  +A G  H+V
Sbjct: 40  ACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS--KPELIGALAGQHIVHVACGESHSV 97

Query: 355 CISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
            +S +G+V+ +G    GQLG T ++ A  VP+L++   L  +    +SCG  H   L  D
Sbjct: 98  ALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKK--LNQQTILQISCGNWHCLALAAD 155

Query: 414 GQVLSWGWNKYGQLGLG 430
           GQ  +WG N YGQLGLG
Sbjct: 156 GQFFTWGQNSYGQLGLG 172



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 8/162 (4%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G+  +GQ G GS    +   P     + D  V+++A G  H+V +  +G VY  G 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   + ++  P+L+    L  +    V+CG  HS  L++ GQV SWG    GQL
Sbjct: 61  NTKGQLGHESEGSK--PELIGA--LAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL 116

Query: 428 GLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           GL    D   +P L+  ++      I+CG WH L LA   Q 
Sbjct: 117 GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQF 158


>gi|428186664|gb|EKX55514.1| hypothetical protein GUITHDRAFT_99290 [Guillardia theta CCMP2712]
          Length = 1033

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 133/268 (49%), Gaps = 46/268 (17%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            ++I + AAG RH+L+LS  G V+ +G G +GQLG G  + +V                  
Sbjct: 790  IEIVQAAAGERHSLLLSSSGIVFSFGDGLQGQLGQGDIVNLV-----------------E 832

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P  V +  V+         V  +A GG HS  +   G   ++G G  GQ G G+     R
Sbjct: 833  PKAVEEDLVD---------VVFVAAGGYHSLAIERNGHATSWGRGGEGQLGSGTRYSTSR 883

Query: 332  PS--YASS-------LMDIQVEQIAAGLWHT--------VCISVEGRVYVFGGNQFGQLG 374
            PS  +AS+       L   +++ IAAG WHT        + +  +G+V+V G N+ GQLG
Sbjct: 884  PSPMFASNEGGARQGLYGCKLKMIAAGDWHTAAAGREHSLLLDDKGKVWVCGSNERGQLG 943

Query: 375  TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            TG+D   ++P +LE P+  S  A + + G   SA + E G V +WG N  G LGLGDS D
Sbjct: 944  TGLDGGSSIPCILE-PLRSSNIASIFA-GPATSAAVDEQGAVFAWGSNSSGMLGLGDSED 1001

Query: 435  RNIP-SLVPIHGFLPRNIACGWWHTLLL 461
            R  P ++  + G    ++A G  H L L
Sbjct: 1002 RRTPCAITSLGGLQVVDLAVGAQHMLAL 1029



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 80/201 (39%), Gaps = 12/201 (5%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            V +  VAAGG H+L +   G    WG GGEGQLG G+R     T    P       G   
Sbjct: 841  VDVVFVAAGGYHSLAIERNGHATSWGRGGEGQLGSGTRYS---TSRPSPMFASNEGG--- 894

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGR-HSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                RQG      K   +     A  GR HS ++ D G +   G    GQ G G      
Sbjct: 895  ---ARQGLYGCKLKMIAAGDWHTAAAGREHSLLLDDKGKVWVCGSNERGQLGTGLDGGSS 951

Query: 331  RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
             P     L    +  I AG   +  +  +G V+ +G N  G LG G  +    P  + + 
Sbjct: 952  IPCILEPLRSSNIASIFAGPATSAAVDEQGAVFAWGSNSSGMLGLGDSEDRRTPCAITS- 1010

Query: 391  ILESKRAKVVSCGARHSAVLT 411
             L   +   ++ GA+H   LT
Sbjct: 1011 -LGGLQVVDLAVGAQHMLALT 1030


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 27  DEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 76

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  +ACG  H+  + D G +  +G 
Sbjct: 77  --------HEKSRKKPEQVVALDAQN---------IVAVACGEAHTLALNDKGQVYAWGL 119

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 120 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 179

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D Q +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 180 LGIDCQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 233

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 234 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 268



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 116/262 (44%), Gaps = 38/262 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
            I  VA G  HTL L+D GQV+ WG   +GQLGL    + +  P  I  L        A 
Sbjct: 94  NIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 153

Query: 268 GKDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAV 303
           G    L + + S       N  G+ G                       ++A GG HS V
Sbjct: 154 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV 213

Query: 304 VTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           +T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  G  HT  ++ EG 
Sbjct: 214 LTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGG 271

Query: 362 VYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSW 419
           V+ FG   +GQLG      E  P K+ E   L       V+CG +H SA +   G++ S+
Sbjct: 272 VFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQVACGRQHTSAFVPSSGRIYSF 328

Query: 420 GWNKYGQLGLGDSIDRNIPSLV 441
           G    GQLG G + +R  P  V
Sbjct: 329 GLGGNGQLGTGSTSNRKSPFTV 350



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 14/166 (8%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           ++L +G   YGQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G
Sbjct: 9   SMLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 68

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   +++   P+  +   L+++    V+CG  H+  L + GQV +WG +  GQ
Sbjct: 69  CNDLGQLGH--EKSRKKPE--QVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 124

Query: 427 LGLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 125 LGLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 167



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 48/301 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLT-SGKHGETPEPFP 99
           P ++   D+ +++    CG A  LA ++ G++  WG  D +GQ  L  S +    P    
Sbjct: 84  PEQVVALDA-QNIVAVACGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 141

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK 156
             ++  +V+ A G+ H +++++A EV+ WG  +          +G  G     QK ++ +
Sbjct: 142 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCQKQTSPQ 191

Query: 157 QSA----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
                  +P  Q       +    +        R +       DE     P L+      
Sbjct: 192 LIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 251

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           KI  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R 
Sbjct: 252 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRK 296

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           +    GS+          V ++ACG +H SA V  +G + +FG G  GQ G GST+++  
Sbjct: 297 VFELMGSI----------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 346

Query: 332 P 332
           P
Sbjct: 347 P 347


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  +ACG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVACGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D Q +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 116/262 (44%), Gaps = 38/262 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
            I  VA G  HTL L+D GQV+ WG   +GQLGL    + +  P  I  L        A 
Sbjct: 85  NIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144

Query: 268 GKDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAV 303
           G    L + + S       N  G+ G                       ++A GG HS V
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV 204

Query: 304 VTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           +T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  G  HT  ++ EG 
Sbjct: 205 LTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGG 262

Query: 362 VYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSW 419
           V+ FG   +GQLG      E  P K+ E   L       V+CG +H SA +   G++ S+
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQVACGRQHTSAFVPSSGRIYSF 319

Query: 420 GWNKYGQLGLGDSIDRNIPSLV 441
           G    GQLG G + +R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    V+CG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 124/301 (41%), Gaps = 48/301 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFP 99
           P ++   D+ +++    CG A  LA ++ G++  WG  D +GQ  L   +     P    
Sbjct: 75  PEQVVALDA-QNIVAVACGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 132

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK 156
             ++  +V+ A G+ H +++++A EV+ WG  +          +G  G     QK ++ +
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCQKQTSPQ 182

Query: 157 QSA----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
                  +P  Q       +    +        R +       DE     P L+      
Sbjct: 183 LIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           KI  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R 
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRK 287

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           +    GS+          V ++ACG +H SA V  +G + +FG G  GQ G GST+++  
Sbjct: 288 VFELMGSI----------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 332 P 332
           P
Sbjct: 338 P 338


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  +ACG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVACGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D Q +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 115/262 (43%), Gaps = 38/262 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
            I  VA G  HTL L+D GQV+ WG   +GQLGL    + +  P  I  L        A 
Sbjct: 85  NIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144

Query: 268 GKDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAV 303
           G    L + + S       N  G+ G                       ++A GG HS V
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV 204

Query: 304 VTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           +T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  G  HT  ++ EG 
Sbjct: 205 LTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGG 262

Query: 362 VYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSW 419
           V+ FG   +GQLG      E  P K+ E   L        +CG +H SA +   G++ S+
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQAACGRQHTSAFVPSSGRIYSF 319

Query: 420 GWNKYGQLGLGDSIDRNIPSLV 441
           G    GQLG G + +R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    V+CG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 48/301 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLT-SGKHGETPEPFP 99
           P ++   D+ +++    CG A  LA ++ G++  WG  D +GQ  L  S +    P    
Sbjct: 75  PEQVVALDA-QNIVAVACGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 132

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK 156
             ++  +V+ A G+ H +++++A EV+ WG  +          +G  G     QK ++ +
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCQKQTSPQ 182

Query: 157 QSA----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
                  +P  Q       +    +        R +       DE     P L+      
Sbjct: 183 LIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           KI  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R 
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRK 287

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           +    GS+          V + ACG +H SA V  +G + +FG G  GQ G GST+++  
Sbjct: 288 VFELMGSI----------VTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 332 P 332
           P
Sbjct: 338 P 338


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  +ACG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVACGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D Q +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 116/262 (44%), Gaps = 38/262 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
            I  VA G  HTL L+D GQV+ WG   +GQLGL    + +  P  I  L        A 
Sbjct: 85  NIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144

Query: 268 GKDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAV 303
           G    L + + S       N  G+ G                       ++A GG HS V
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV 204

Query: 304 VTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           +T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  G  HT  ++ EG 
Sbjct: 205 LTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGG 262

Query: 362 VYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSW 419
           V+ FG   +GQLG      E  P K+ E   L       V+CG +H SA +   G++ S+
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQVACGRQHTSAFVPSSGRIYSF 319

Query: 420 GWNKYGQLGLGDSIDRNIPSLV 441
           G    GQLG G + +R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    V+CG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 48/301 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLT-SGKHGETPEPFP 99
           P ++   D+ +++    CG A  LA ++ G++  WG  D +GQ  L  S +    P    
Sbjct: 75  PEQVVALDA-QNIVAVACGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 132

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK 156
             ++  +V+ A G+ H +++++A EV+ WG  +          +G  G     QK ++ +
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCQKQTSPQ 182

Query: 157 QSA----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
                  +P  Q       +    +        R +       DE     P L+      
Sbjct: 183 LIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           KI  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R 
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRK 287

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           +    GS+          V ++ACG +H SA V  +G + +FG G  GQ G GST+++  
Sbjct: 288 VFELMGSI----------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 332 P 332
           P
Sbjct: 338 P 338


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 123/259 (47%), Gaps = 30/259 (11%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           +K   V +GGRH + L+  G V+ WG G EG+LG GSR   + TP  I            
Sbjct: 515 IKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADAL-TPRKIETFPEKC----- 568

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                              +++I+CG  HSA +  +G L T+G G+YG+ GHG+ +  L+
Sbjct: 569 -------------------IRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLK 609

Query: 332 PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           P    +L   QV Q+A G     T+C++ +G VY +G   FG+LG G      VPK +E 
Sbjct: 610 PKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPKPVER 669

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
             L  +    + CGA+ S  L+  G V +WG   Y +LG G       P +V  +     
Sbjct: 670 --LSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKV 727

Query: 449 RNIACGWWHTLLLAETTQI 467
            ++A G  H L + E  Q+
Sbjct: 728 VDVAVGALHCLAVTEGGQV 746



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 129/267 (48%), Gaps = 38/267 (14%)

Query: 203  PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
            P L+     V IT+V+  AGG+H L LS+ G+V+ WG G +G+LG G+R           
Sbjct: 1482 PTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNR----------- 1530

Query: 261  CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                  S  D P ++           G   VK +A GG HSA +   G L T+G G YG+
Sbjct: 1531 ------SSLDHPRIIE-------SLRGDLIVK-VATGGSHSAAINATGGLYTWGKGRYGR 1576

Query: 321  CGHGSTNDQLRPSYASSLMDIQVEQIAAGL--WHTVCISVEGR-----VYVFGGNQFGQL 373
             GH  + DQL+P   ++L D  V  +A G     T+CI+ EG      V+ +G   +G+L
Sbjct: 1577 LGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCIT-EGTGGSSVVWSWGDGDYGKL 1635

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
            G G      VP +++T  L  K    V+CG++ S  L++ G V +WG   Y +LG G   
Sbjct: 1636 GRGGSDGCKVPAIIDT--LMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDE 1693

Query: 434  DRNIPSLV-PIHGFLPRNIACGWWHTL 459
                P L+  + G     ++ G  H +
Sbjct: 1694 HVRRPKLIESLRGMKVVEVSVGSLHCI 1720



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 37/240 (15%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P ++    G  I KVA GG H+  ++  G ++ WG G  G+LG       +  P L+  L
Sbjct: 1536 PRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL-KPKLVNAL 1594

Query: 263  EH-------AASGKDRPLLVRQGSVNSS----------GKAGR----------------- 288
            +          +G  + L + +G+  SS          GK GR                 
Sbjct: 1595 KDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMG 1654

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
             ++  +ACG + S  ++ AG + T+G G Y + GHGS     RP    SL  ++V +++ 
Sbjct: 1655 KHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSV 1714

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G  H +     G VY +G N  GQ+G G  QA  +P+L+    L+      VSCG+ H+ 
Sbjct: 1715 GSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAA--LQGHHISHVSCGSAHTV 1772



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G ++GWG+   GQLG   G+++K +P    IPC   AA    +P+               
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVK-IP----IPCPSLAAL---KPI--------------- 1442

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                ++  G +    VT  G +   G+G  G+ G GS      P+   S+  + + Q++ 
Sbjct: 1443 ----QLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSV 1498

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             AG  H + +S EG VY +G    G+LG G   + + P+++E+  L       V+ G  H
Sbjct: 1499 NAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIES--LRGDLIVKVATGGSH 1556

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA +   G + +WG  +YG+LG  DS D+  P LV  +   L  ++ACG
Sbjct: 1557 SAAINATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACG 1605



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 159/427 (37%), Gaps = 99/427 (23%)

Query: 22  VYMWGY--------LPGTSPEKSPILSPIPARLC------GGDSWKDVCGGGCGFALATS 67
           V++WG         L G S  K+P+ S    RL       G  S   V  GG  +A   S
Sbjct: 431 VFVWGLNDKDQLGGLKG-SKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGES 489

Query: 68  ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
            SG+L         G   +T      T   FP P +   V +  G  H +++T  G VY+
Sbjct: 490 TSGRL---------GLGPVTGSVSRLTQVLFPQPIKKLAVHS--GGRHAMALTYDGHVYS 538

Query: 128 WG-------------------WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
           WG                     E  P  K  RD  S GS    + G    L T      
Sbjct: 539 WGDGEEGKLGHGSRADALTPRKIETFPE-KCIRDI-SCGSSHSAAIGSSGTLYT------ 590

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLI 226
               G  +  R               G+    L P  V    G ++ +VA G R   TL 
Sbjct: 591 ---WGHGMYGRL------------GHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLC 635

Query: 227 LSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           L+  G V+ WG G  G+LG G S    VP P          SG+D               
Sbjct: 636 LTQDGLVYSWGDGDFGKLGRGGSDGCCVPKP------VERLSGQD--------------- 674

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
                V +I CG + S  ++  G + T+G G Y + GHGS     RP     L + +V  
Sbjct: 675 -----VVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVD 729

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           +A G  H + ++  G+V+ +G N  GQ G G       P  ++   LE  +   ++CG+ 
Sbjct: 730 VAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKP--MKVQGLEGVKITKLACGSS 787

Query: 406 HSAVLTE 412
           HS    +
Sbjct: 788 HSIAFAD 794



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 8/152 (5%)

Query: 312 TFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
            F WGL    Q G    +    P  +  L  ++V Q+  G      +++ G+VY  G + 
Sbjct: 431 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGEST 490

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+LG G     +V +L +    +  +   V  G RH+  LT DG V SWG  + G+LG 
Sbjct: 491 SGRLGLG-PVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGH 549

Query: 430 GDSIDRNIPSLVPIHGF---LPRNIACGWWHT 458
           G   D   P    I  F     R+I+CG  H+
Sbjct: 550 GSRADALTPR--KIETFPEKCIRDISCGSSHS 579



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 76/192 (39%), Gaps = 31/192 (16%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P ++    G  IT VA G + +L LS  G V+ WG G   +LG GS  + V  P LI  L
Sbjct: 1646 PAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSD-EHVRRPKLIESL 1704

Query: 263  EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                        V E++ G  H     D G + T+G    GQ G
Sbjct: 1705 RGMK------------------------VVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIG 1740

Query: 323  HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
             G+T     P   ++L    +  ++ G  HTV  S+    +    N   +  TG    + 
Sbjct: 1741 DGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESH----NMHKRRRTGAKLPDQ 1796

Query: 383  VPKLLETPILES 394
            +P  LE  +L++
Sbjct: 1797 IP--LEYNLLQN 1806



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 3/155 (1%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            FGWG    GQ G         P    SL  ++  Q+  G      ++ EG+V+  G    
Sbjct: 1409 FGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGYGAG 1468

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G +++  +P L+E+          V+ G +H   L+ +G+V SWG    G+LG G
Sbjct: 1469 GRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHG 1528

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            +    + P ++  + G L   +A G  H+  +  T
Sbjct: 1529 NRSSLDHPRIIESLRGDLIVKVATGGSHSAAINAT 1563



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 53   KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
            K +    CG  F+LA S++G + TWG  D     +  S +H   P+         VV+ +
Sbjct: 1655 KHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGH-GSDEHVRRPKLIESLRGMKVVEVS 1713

Query: 111  AGWAHCVSVTEAGEVYTWG 129
             G  HC++  + G+VYTWG
Sbjct: 1714 VGSLHCIAAVDNGDVYTWG 1732


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 123/259 (47%), Gaps = 30/259 (11%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           +K   V +GGRH + L+  G V+ WG G EG+LG GSR   + TP  I            
Sbjct: 516 IKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADAL-TPRKIETFPEKC----- 569

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                              +++I+CG  HSA +  +G L T+G G+YG+ GHG+ +  L+
Sbjct: 570 -------------------IRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLK 610

Query: 332 PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           P    +L   QV Q+A G     T+C++ +G VY +G   FG+LG G      VPK +E 
Sbjct: 611 PKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPKPVER 670

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
             L  +    + CGA+ S  L+  G V +WG   Y +LG G       P +V  +     
Sbjct: 671 --LSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKV 728

Query: 449 RNIACGWWHTLLLAETTQI 467
            ++A G  H L + E  Q+
Sbjct: 729 VDVAVGALHCLAVTEGGQV 747



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 129/267 (48%), Gaps = 38/267 (14%)

Query: 203  PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
            P L+     V IT+V+  AGG+H L LS+ G+V+ WG G +G+LG G+R           
Sbjct: 1483 PTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNR----------- 1531

Query: 261  CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                  S  D P ++           G   VK +A GG HSA +   G L T+G G YG+
Sbjct: 1532 ------SSLDHPRIIE-------SLRGDLIVK-VATGGSHSAAINATGGLYTWGKGRYGR 1577

Query: 321  CGHGSTNDQLRPSYASSLMDIQVEQIAAGL--WHTVCISVEGR-----VYVFGGNQFGQL 373
             GH  + DQL+P   ++L D  V  +A G     T+CI+ EG      V+ +G   +G+L
Sbjct: 1578 LGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCIT-EGTGGSSVVWSWGDGDYGKL 1636

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
            G G      VP +++T  L  K    V+CG++ S  L++ G V +WG   Y +LG G   
Sbjct: 1637 GRGGSDGCKVPAIIDT--LMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDE 1694

Query: 434  DRNIPSLV-PIHGFLPRNIACGWWHTL 459
                P L+  + G     ++ G  H +
Sbjct: 1695 HVRRPKLIESLRGMKVVEVSVGSLHCI 1721



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 37/240 (15%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P ++    G  I KVA GG H+  ++  G ++ WG G  G+LG       +  P L+  L
Sbjct: 1537 PRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL-KPKLVNAL 1595

Query: 263  EH-------AASGKDRPLLVRQGSVNSS----------GKAGR----------------- 288
            +          +G  + L + +G+  SS          GK GR                 
Sbjct: 1596 KDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMG 1655

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
             ++  +ACG + S  ++ AG + T+G G Y + GHGS     RP    SL  ++V +++ 
Sbjct: 1656 KHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSV 1715

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G  H +     G VY +G N  GQ+G G  QA  +P+L+    L+      VSCG+ H+ 
Sbjct: 1716 GSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAA--LQGHHISHVSCGSAHTV 1773



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            G ++GWG+   GQLG   G+++K +P    IPC   AA    +P+               
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVK-IP----IPCPSLAAL---KPI--------------- 1443

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                ++  G +    VT  G +   G+G  G+ G GS      P+   S+  + + Q++ 
Sbjct: 1444 ----QLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSV 1499

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             AG  H + +S EG VY +G    G+LG G   + + P+++E+  L       V+ G  H
Sbjct: 1500 NAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIES--LRGDLIVKVATGGSH 1557

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA +   G + +WG  +YG+LG  DS D+  P LV  +   L  ++ACG
Sbjct: 1558 SAAINATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACG 1606



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 159/427 (37%), Gaps = 99/427 (23%)

Query: 22  VYMWGY--------LPGTSPEKSPILSPIPARLC------GGDSWKDVCGGGCGFALATS 67
           V++WG         L G S  K+P+ S    RL       G  S   V  GG  +A   S
Sbjct: 432 VFVWGLNDKDQLGGLKG-SKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGES 490

Query: 68  ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
            SG+L         G   +T      T   FP P +   V +  G  H +++T  G VY+
Sbjct: 491 TSGRL---------GLGPVTGSVSRLTQVLFPQPIKKLAVHS--GGRHAMALTYDGHVYS 539

Query: 128 WG-------------------WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
           WG                     E  P  K  RD  S GS    + G    L T      
Sbjct: 540 WGDGEEGKLGHGSRADALTPRKIETFPE-KCIRDI-SCGSSHSAAIGSSGTLYT------ 591

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLI 226
               G  +  R               G+    L P  V    G ++ +VA G R   TL 
Sbjct: 592 ---WGHGMYGRL------------GHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLC 636

Query: 227 LSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           L+  G V+ WG G  G+LG G S    VP P          SG+D               
Sbjct: 637 LTQDGLVYSWGDGDFGKLGRGGSDGCCVPKP------VERLSGQD--------------- 675

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
                V +I CG + S  ++  G + T+G G Y + GHGS     RP     L + +V  
Sbjct: 676 -----VVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVD 730

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           +A G  H + ++  G+V+ +G N  GQ G G       P  ++   LE  +   ++CG+ 
Sbjct: 731 VAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKP--MKVQGLEGVKITKLACGSS 788

Query: 406 HSAVLTE 412
           HS    +
Sbjct: 789 HSIAFAD 795



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 8/152 (5%)

Query: 312 TFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
            F WGL    Q G    +    P  +  L  ++V Q+  G      +++ G+VY  G + 
Sbjct: 432 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGEST 491

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+LG G     +V +L +    +  +   V  G RH+  LT DG V SWG  + G+LG 
Sbjct: 492 SGRLGLG-PVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGH 550

Query: 430 GDSIDRNIPSLVPIHGF---LPRNIACGWWHT 458
           G   D   P    I  F     R+I+CG  H+
Sbjct: 551 GSRADALTPR--KIETFPEKCIRDISCGSSHS 580



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 76/192 (39%), Gaps = 31/192 (16%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P ++    G  IT VA G + +L LS  G V+ WG G   +LG GS  + V  P LI  L
Sbjct: 1647 PAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSD-EHVRRPKLIESL 1705

Query: 263  EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                        V E++ G  H     D G + T+G    GQ G
Sbjct: 1706 RGMK------------------------VVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIG 1741

Query: 323  HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
             G+T     P   ++L    +  ++ G  HTV  S+    +    N   +  TG    + 
Sbjct: 1742 DGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESH----NMHKRRRTGAKLPDQ 1797

Query: 383  VPKLLETPILES 394
            +P  LE  +L++
Sbjct: 1798 IP--LEYNLLQN 1807



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 3/155 (1%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            FGWG    GQ G         P    SL  ++  Q+  G      ++ EG+V+  G    
Sbjct: 1410 FGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGYGAG 1469

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G +++  +P L+E+          V+ G +H   L+ +G+V SWG    G+LG G
Sbjct: 1470 GRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHG 1529

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            +    + P ++  + G L   +A G  H+  +  T
Sbjct: 1530 NRSSLDHPRIIESLRGDLIVKVATGGSHSAAINAT 1564



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 53   KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
            K +    CG  F+LA S++G + TWG  D     +  S +H   P+         VV+ +
Sbjct: 1656 KHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGH-GSDEHVRRPKLIESLRGMKVVEVS 1714

Query: 111  AGWAHCVSVTEAGEVYTWG 129
             G  HC++  + G+VYTWG
Sbjct: 1715 VGSLHCIAAVDNGDVYTWG 1733


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 129/272 (47%), Gaps = 28/272 (10%)

Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P L
Sbjct: 483 LAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKL 541

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I                        GK     V  IACG  +SA +T  G L T+G G Y
Sbjct: 542 ISAF--------------------CGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNY 581

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G      
Sbjct: 642 GSDGCKTPKLVEK--LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 437 IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P L+  + G    ++A G  H L L E +++
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP L+ 
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLVE 653

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           V ++ CG + S  +T  G + ++G G   +
Sbjct: 654 KLQDLD------------------------VVKVRCGSQFSVALTKDGQVYSWGKGDNQR 689

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLHAT 749

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           +  P  L  P L++K    ++CG   S
Sbjct: 750 KPEPAAL--PGLDTKHIVGIACGPAQS 774



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 82/211 (38%), Gaps = 64/211 (30%)

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV------- 364
             GWGL G   + +    + P   + L  + V QIA      + +S  GRVY        
Sbjct: 426 VIGWGLIGWKYYANV---IGPIQCAGLASLGVSQIACAEKRFLILSRSGRVYTQAYSSDA 482

Query: 365 -------------------------------------FGGNQFGQLGTGVDQAENVPKLL 387
                                                +G    G+LG G    + VP  L
Sbjct: 483 LAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVP--L 536

Query: 388 ETPILES--------KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           E P L S        +R   ++CG+ +SA +T +G++ +WG   YG+LG G S D  IP 
Sbjct: 537 EEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 440 LVP-IHGFLPRNIACGW--WHTLLLAETTQI 467
           LV  + G    ++ACG     TL + E  Q+
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQV 627



 Score = 45.1 bits (105), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P L    +  CG  + + V    CG  ++ A +  G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEPKLI---SAFCGKQAGQRVVHIACGSTYSAAITAEGEL 573

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALT 674

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q    +     P P  +P L+
Sbjct: 735 GSNDQCQ-HFDTLHATKPEPAALPGLD 760


>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
          Length = 425

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 42/262 (16%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDR 271
           K+ +V+AG  H+  ++  G+++ WG    GQLGLG R  K+V TP  + CL  A      
Sbjct: 126 KVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADA------ 179

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS------ 325
                              VK +A G  HS   T+ G +L++G    G+ GHG       
Sbjct: 180 ------------------RVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILG 221

Query: 326 ---TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
              T  +  P    +L  +++++IAAG+ H+ CI  +G +++FG  Q  + G G    E 
Sbjct: 222 FSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG--QKTEKGFGRSGDEL 279

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            P ++E    E   ++ V+CG  H+ V+T+ G + SWG N+ G LGLG +     P ++ 
Sbjct: 280 RPTVVE----EVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLK 335

Query: 443 --IHGFLPRNIACGWWHTLLLA 462
             +  F    ++CGW HT +++
Sbjct: 336 SSLFKFPVSKVSCGWKHTAVIS 357



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 27/238 (11%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG G  G+LG+G+ ++   +P   P            L  R G  +    A       +A
Sbjct: 37  WGNGDYGRLGMGA-LESRWSPTACPFF----------LTGRPGDDDDDPPA------SLA 79

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGG H+  +T++G +   G   +GQ G GS+          S  D +V +++AG  H+  
Sbjct: 80  CGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCA 139

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++ +G+++ +G N  GQLG G    + V    +   L   R K+V+ G+ HS   TE+G+
Sbjct: 140 VTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGE 199

Query: 416 VLSWGWNKYGQLG-------LGDSIDRN--IPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           VLSWG    G+LG       LG SI  +   P L+  + G   + IA G  H+  + E
Sbjct: 200 VLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDE 257



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 123/322 (38%), Gaps = 71/322 (22%)

Query: 65  ATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           A +  GKL  WG  +  GQ  L   +GK   TP       +A V   A G  H ++ TE 
Sbjct: 139 AVTADGKLFAWGR-NSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEE 197

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           GEV +WG              G  G   K S    S   +E  P   K      +KR   
Sbjct: 198 GEVLSWG----------AAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAA 247

Query: 183 S----------------SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
                              + E     SGDE   L P +V   P  +  +VA GG HT +
Sbjct: 248 GMLHSACIDEKGTLFIFGQKTEKGFGRSGDE---LRPTVVEEVPFSE--EVACGGYHTCV 302

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           ++D G ++ WG    G LGLG    MV +P ++      +S    P              
Sbjct: 303 VTDSGDLYSWGSNENGCLGLGG-TDMVRSPEVLK-----SSLFKFP-------------- 342

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWG-----LY-------GQCGHGSTNDQLRPSY 334
               V +++CG +H+AV++  G + T+GWG      +       GQ GHG+  D   P  
Sbjct: 343 ----VSKVSCGWKHTAVIS-GGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMM 397

Query: 335 ASSLMDIQVEQIAAGLWHTVCI 356
                + +   ++ G  HT  I
Sbjct: 398 VEFGKNARAVHVSCGFNHTGAI 419


>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
           magnipapillata]
          Length = 896

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 124/283 (43%), Gaps = 59/283 (20%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           N G+++  VA G  HT+ L + G V+ WG    GQLG+G                     
Sbjct: 494 NQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGD-----------------TRT 535

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
           + RP+L+   S           +  + CG  H+  +T    + ++GWG++GQ G  S  +
Sbjct: 536 RYRPVLITHISSKQ--------IVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVEN 587

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           QL P     L   +V Q AAG  H+  ++ +  VY FG + +GQLG G    + +P+L++
Sbjct: 588 QLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVD 647

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN-------------KYGQLGLGDSIDR 435
           +  L+S    ++SCG   +  ++ED  +  WG N             KYG+    ++ D 
Sbjct: 648 SLTLDS--IYLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDL 705

Query: 436 NIPSLVPIHGFLPR-----------NIACGWWHTLLLAETTQI 467
           N       H F P             I CG WH ++L    Q+
Sbjct: 706 N-------HRFYPETLQFQLQHPITQIFCGNWHYIILTSVNQV 741



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 153/375 (40%), Gaps = 82/375 (21%)

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           L T     + A G  H   VT   E+YTWG +EC             G  +KD+  + + 
Sbjct: 441 LFTSTPRARIACGRNHIAFVTNNKELYTWG-KEC------------GG--RKDNV-QNTC 484

Query: 160 LPTEQAPPSDKRAGEEVVK----RRKTSSAREESENPASGDEFFTL---------SPCLV 206
           LP       ++  G +VV        T +  EE       +E+  L          P L+
Sbjct: 485 LPMRMENLHNQ--GIQVVSVACGEFHTIALCEEGVYSWGSNEYGQLGVGDTRTRYRPVLI 542

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
           T     +I  V  G  HTL ++   +V+ WG+G  GQLGL S ++   TP  I  L+   
Sbjct: 543 THISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKS-VENQLTPKQIDLLD--- 598

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
                           S K     V + A G  HSAV+T    + TFG  LYGQ G GS 
Sbjct: 599 ----------------SHK-----VIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSH 637

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN--QFGQLGT------GVD 378
             Q+ P    SL    +  I+ G + T+ IS +  ++ +G N  QF           G  
Sbjct: 638 YKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRK 697

Query: 379 QAENVPKL------------LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            A N   L            L+ PI +      + CG  H  +LT   QV +WG+N  GQ
Sbjct: 698 MASNTKDLNHRFYPETLQFQLQHPITQ------IFCGNWHYIILTSVNQVYTWGYNDCGQ 751

Query: 427 LGLGDSIDRNIPSLV 441
           LG  + ID++ P LV
Sbjct: 752 LGHYNKIDQSAPRLV 766



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 100/196 (51%), Gaps = 17/196 (8%)

Query: 274 LVRQGSVNSSGKAGRSYVK-EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ--L 330
           L++  S++S+     S  +  IACG  H A VT+   L T  WG   +CG    N Q   
Sbjct: 429 LIKSDSISSNDLLFTSTPRARIACGRNHIAFVTNNKELYT--WG--KECGGRKDNVQNTC 484

Query: 331 RPSYASSLMD--IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            P    +L +  IQV  +A G +HT+ +  EG VY +G N++GQLG G  +    P L+ 
Sbjct: 485 LPMRMENLHNQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLIT 543

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP---SLVPIHG 445
              + SK+   V CGA H+  +T D +V SWGW  +GQLGL    ++  P    L+  H 
Sbjct: 544 H--ISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHK 601

Query: 446 FLPRNIACGWWHTLLL 461
            +    A G+ H+ +L
Sbjct: 602 VIQA--AAGYAHSAVL 615



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 43/217 (19%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV------- 253
           L+P  + L    K+ + AAG  H+ +L+    V+ +G    GQLG+GS  K V       
Sbjct: 589 LTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDS 648

Query: 254 ---PTPHLIPC--LEHAASGKDRPLLV--------------------RQGSVNSSGKAGR 288
               + +LI C   E  A  +D+ +                      R+ + N+     R
Sbjct: 649 LTLDSIYLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHR 708

Query: 289 SY-----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
            Y           + +I CG  H  ++T    + T+G+   GQ GH +  DQ  P    +
Sbjct: 709 FYPETLQFQLQHPITQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKA 768

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           L+   +  +A G   +V    +  +  +G N  G++G
Sbjct: 769 LIRRAIIGVAVGAEFSVAFDADDNIMAWGRNDEGKIG 805



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 93/236 (39%), Gaps = 36/236 (15%)

Query: 51  SWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
           S K +    CG    LA +   K+ +WG     GQ  L S ++  TP+   L     V++
Sbjct: 546 SSKQIVSVVCGAYHTLAITSDYKVYSWGWGV-HGQLGLKSVENQLTPKQIDLLDSHKVIQ 604

Query: 109 AAAGWAHCVSVTEAGEVYTWG------------WRECVPSAKVTRDFGSAGSFQKDSTGK 156
           AAAG+AH   +T    VYT+G            +++ +P            S   DS   
Sbjct: 605 AAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQL--------VDSLTLDSIYL 656

Query: 157 QSALPTEQAPPSDKRA----GEEV------VKRRKTSSAREESENPASGDEFFTLSPCLV 206
            S  P E    S+ +     G          K   +   R+ + N    +  F   P  +
Sbjct: 657 ISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFY--PETL 714

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
                  IT++  G  H +IL+ + QV+ WGY   GQLG  ++I     P L+  L
Sbjct: 715 QFQLQHPITQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQ-SAPRLVKAL 769


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  +ACG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVACGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D Q +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 116/262 (44%), Gaps = 38/262 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
            I  VA G  HTL L+D GQV+ WG   +GQLGL    + +  P  I  L        A 
Sbjct: 85  NIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144

Query: 268 GKDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAV 303
           G    L + + S       N  G+ G                       ++A GG HS V
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV 204

Query: 304 VTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           +T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  G  HT  ++ EG 
Sbjct: 205 LTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGG 262

Query: 362 VYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSW 419
           V+ FG   +GQLG      E  P K+ E   L       V+CG +H SA +   G++ S+
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQVACGRQHTSAFVPSSGRIYSF 319

Query: 420 GWNKYGQLGLGDSIDRNIPSLV 441
           G    GQLG G + +R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    V+CG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 124/301 (41%), Gaps = 48/301 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFP 99
           P ++   D+ +++    CG A  LA ++ G++  WG  D +GQ  L   +     P    
Sbjct: 75  PEQVVALDA-QNIVAVACGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 132

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK 156
             ++  +V+ A G+ H +++++A EV+ WG  +          +G  G     QK ++ +
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCQKQTSPQ 182

Query: 157 QSA----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
                  +P  Q       +    +        R +       DE     P L+      
Sbjct: 183 LIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           KI  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R 
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRK 287

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           +    GS+          V ++ACG +H SA V  +G + +FG G  GQ G GST+++  
Sbjct: 288 VFELMGSI----------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 332 P 332
           P
Sbjct: 338 P 338


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  +ACG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVACGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D Q +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 116/262 (44%), Gaps = 38/262 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
            I  VA G  HTL L+D GQV+ WG   +GQLGL    + +  P  I  L        A 
Sbjct: 85  NIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144

Query: 268 GKDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAV 303
           G    L + + S       N  G+ G                       ++A GG HS V
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV 204

Query: 304 VTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           +T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  G  HT  ++ EG 
Sbjct: 205 LTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGG 262

Query: 362 VYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSW 419
           V+ FG   +GQLG      E  P K+ E   L       V+CG +H SA +   G++ S+
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQVACGRQHTSAFVPSSGRIYSF 319

Query: 420 GWNKYGQLGLGDSIDRNIPSLV 441
           G    GQLG G + +R  P  V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    V+CG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 124/301 (41%), Gaps = 48/301 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFP 99
           P ++   D+ +++    CG A  LA ++ G++  WG  D +GQ  L   +     P    
Sbjct: 75  PEQVVALDA-QNIVAVACGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 132

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK 156
             ++  +V+ A G+ H +++++A EV+ WG  +          +G  G     QK ++ +
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCQKQTSPQ 182

Query: 157 QSA----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
                  +P  Q       +    +        R +       DE     P L+      
Sbjct: 183 LIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           KI  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R 
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRK 287

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           +    GS+          V ++ACG +H SA V  +G + +FG G  GQ G GST+++  
Sbjct: 288 VFELMGSI----------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 332 P 332
           P
Sbjct: 338 P 338


>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
          Length = 425

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 42/262 (16%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDR 271
           K+ +V+AG  H+  ++  G+++ WG    GQLGLG R  K+V TP  + CL         
Sbjct: 126 KVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLAD------- 178

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS------ 325
                            S VK +A G  HS   T+ G +L++G    G+ GHG       
Sbjct: 179 -----------------SRVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILG 221

Query: 326 ---TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
              T  +  P    +L  +++++IAAG+ H+ CI  +G +++FG  Q  + G G    E 
Sbjct: 222 FSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG--QKTEKGFGRSGDEL 279

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            P ++E    E   ++ V+CG  H+ V+T+ G + SWG N+ G LGLG +     P ++ 
Sbjct: 280 RPTVVE----EVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLK 335

Query: 443 --IHGFLPRNIACGWWHTLLLA 462
             +  F    ++CGW HT +++
Sbjct: 336 SSLFKFPVSKVSCGWKHTAVIS 357



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 27/238 (11%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG G  G+LG+G+ ++   +P   P            L  R G  +    A       +A
Sbjct: 37  WGNGDYGRLGMGA-LESRWSPTACPFF----------LTGRPGDDDDDPPA------SLA 79

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGG H+  +T++G +   G   +GQ G GS+          S  D +V +++AG  H+  
Sbjct: 80  CGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCA 139

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++ +G+++ +G N  GQLG G    + V    +   L   R K+V+ G+ HS   TE+G+
Sbjct: 140 VTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGE 199

Query: 416 VLSWGWNKYGQLG-------LGDSIDRN--IPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           VLSWG    G+LG       LG SI  +   P L+  + G   + IA G  H+  + E
Sbjct: 200 VLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDE 257



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 123/322 (38%), Gaps = 71/322 (22%)

Query: 65  ATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           A +  GKL  WG  +  GQ  L   +GK   TP       ++ V   A G  H ++ TE 
Sbjct: 139 AVTADGKLFAWGR-NSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEE 197

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           GEV +WG              G  G   K S    S   +E  P   K      +KR   
Sbjct: 198 GEVLSWG----------AAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAA 247

Query: 183 S----------------SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
                              + E     SGDE   L P +V   P  +  +VA GG HT +
Sbjct: 248 GMLHSACIDEKGTLFIFGQKTEKGFGRSGDE---LRPTVVEEVPFSE--EVACGGYHTCV 302

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           ++D G ++ WG    G LGLG    MV +P ++      +S    P              
Sbjct: 303 VTDSGDLYSWGSNENGCLGLGG-TDMVRSPEVLK-----SSLFKFP-------------- 342

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWG-----LY-------GQCGHGSTNDQLRPSY 334
               V +++CG +H+AV++  G + T+GWG      +       GQ GHG+  D   P  
Sbjct: 343 ----VSKVSCGWKHTAVIS-GGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMM 397

Query: 335 ASSLMDIQVEQIAAGLWHTVCI 356
                + +   ++ G  HT  I
Sbjct: 398 VEFGKNARAVHVSCGFNHTGAI 419


>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
           protein 2 [Mustela putorius furo]
          Length = 344

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 126/252 (50%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 10  GDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 64

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 65  -TNHGLVPC---------------HISTNLSNKQ----VTEVACGSYHSLVLTSDGEVFA 104

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +QL P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 105 WGYNNSGQVGSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNG 164

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 165 QLGLG--SSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 222

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 223 KSNQSYPAPVVV 234



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K +T+VA G  H+L+L+  G+V+ WGY   GQ+G GS    +    + 
Sbjct: 69  LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVT 128

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            CL++                          V  IACG   S  V + G +  +G+   G
Sbjct: 129 GCLQNKV------------------------VVNIACGQMCSMAVVNTGEVYVWGYNGNG 164

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           Q G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG   
Sbjct: 165 QLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 224

Query: 380 AENVPKLLETPILESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
            ++ P  +   ++E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 225 NQSYPAPV---VVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 264



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 27  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV 86

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 87  ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRV-TGCLQNKVVVNIACGQMC 145

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  +   G+V  WG+N  GQLGLG S ++  P  +  + G   + +ACG+ HTL+L +  
Sbjct: 146 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 205

Query: 466 QI 467
           Q+
Sbjct: 206 QV 207



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 96/235 (40%), Gaps = 36/235 (15%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 18  PRRLESLNGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 73

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V + A G  H + +T  GEV+ WG             + ++G     ST  
Sbjct: 74  ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 120

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCL 205
           Q  +P         +    +   +  S A   +        +G+    L       +PC 
Sbjct: 121 Q-LIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 179

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           +    G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++     P P ++
Sbjct: 180 IAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVV 234



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S     IP R+ G    K V    CG   ++A   +G++  WG  
Sbjct: 102 VFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 160

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 161 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 211


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 129/259 (49%), Gaps = 30/259 (11%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           +K   V +GG+H L LS  G+V+ WG G +G+LG G++                 S  +R
Sbjct: 668 IKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNK-----------------SSCER 710

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P ++     +  GK     V ++ACGG HSA +T +G L T+G G YG+ GHG ++DQLR
Sbjct: 711 PRVIE----SLRGKE----VVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLR 762

Query: 332 PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           P    +L   +V  +A  +G   T+C++ +  V+ +G   +G+LG G      VP  L  
Sbjct: 763 PKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGCKVP--LRV 820

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIHGFLP 448
            +L+      V CG++ S  LT  G V +WG   Y +LG G D   R    +  + G   
Sbjct: 821 DLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHVRRPKRVAALQGKKV 880

Query: 449 RNIACGWWHTLLLAETTQI 467
             IA G  H +   +T ++
Sbjct: 881 ICIAVGSLHCVACTDTGEV 899



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 132/320 (41%), Gaps = 67/320 (20%)

Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
           V   +G  HC++++  GEVY+WG            D G  G   K S  +   + + +  
Sbjct: 671 VVVNSGGKHCLALSAEGEVYSWG----------EGDDGKLGHGNKSSCERPRVIESLR-- 718

Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
                 G+EVV     +     S    +  E +T                 L P  V   
Sbjct: 719 ------GKEVVD---VACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEAL 769

Query: 210 PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
            G ++  VA  +G   TL ++D   VW WG G  G+LG G                  + 
Sbjct: 770 SGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRG-----------------GSD 812

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
           G   PL  R   +   G      V  + CG + S  +T +G++ T+G G Y + GHG+ +
Sbjct: 813 GCKVPL--RVDLLQGMG------VIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDD 864

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
              RP   ++L   +V  IA G  H V  +  G VY +G N  GQLG G   A + P+L+
Sbjct: 865 HVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIHKPRLV 924

Query: 388 ETPILESKRAKVVSCGARHS 407
               L+ K+   VSCG+ H+
Sbjct: 925 AA--LQGKKINRVSCGSAHT 942



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 50/264 (18%)

Query: 231 GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
           G + GWG+   GQLG   G+++K+      +PC    A    RP+ V  G     +V + 
Sbjct: 581 GTILGWGHNHRGQLGGVEGAKVKLP-----MPC---EALSALRPIQVVGGEQTLFAVTAD 632

Query: 284 GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
           GK   +                            ++K++    GG+H   ++  G + ++
Sbjct: 633 GKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSW 692

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G G  G+ GHG+ +   RP    SL   +V  +A G  H+ CI+  G +Y +G  ++G+L
Sbjct: 693 GEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRL 752

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGD 431
           G G    +  PK +E   L   R + V+CG+  +  L  T+D  V SWG   YG+LG G 
Sbjct: 753 GHGDSDDQLRPKKVEA--LSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGG 810

Query: 432 SIDRNIPSLVP-IHGFLPRNIACG 454
           S    +P  V  + G     + CG
Sbjct: 811 SDGCKVPLRVDLLQGMGVIRVECG 834



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 25/152 (16%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V L  G+ + +V  G + ++ L+  G V+ WG G   +LG G+    V  P  +  L
Sbjct: 817 PLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTD-DHVRRPKRVAAL 875

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           +                    GK     V  IA G  H    TD G + T+G    GQ G
Sbjct: 876 Q--------------------GKK----VICIAVGSLHCVACTDTGEVYTWGDNDEGQLG 911

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
            G+ N   +P   ++L   ++ +++ G  HTV
Sbjct: 912 DGTVNAIHKPRLVAALQGKKINRVSCGSAHTV 943



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 1/153 (0%)

Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +G +L +G    GQ G         P    +L  ++  Q+  G      ++ +G+VY  G
Sbjct: 580 SGTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYATG 639

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
               G+LG G   + + P LLE+      +  VV+ G +H   L+ +G+V SWG    G+
Sbjct: 640 YGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGK 699

Query: 427 LGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
           LG G+      P ++  + G    ++ACG  H+
Sbjct: 700 LGHGNKSSCERPRVIESLRGKEVVDVACGGAHS 732



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G  F++A + SG + TWG  D     + T   H   P+         V+  A G  HCV+
Sbjct: 834 GSQFSVALTASGSVYTWGKGDYHRLGHGTD-DHVRRPKRVAALQGKKVICIAVGSLHCVA 892

Query: 119 VTEAGEVYTWG 129
            T+ GEVYTWG
Sbjct: 893 CTDTGEVYTWG 903



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 53  KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
           K V   G    LA S  G++ +WG  DD G+    +    E P          VV  A G
Sbjct: 670 KVVVNSGGKHCLALSAEGEVYSWGEGDD-GKLGHGNKSSCERPRVIESLRGKEVVDVACG 728

Query: 113 WAHCVSVTEAGEVYTWG 129
            AH   +T +GE+YTWG
Sbjct: 729 GAHSACITASGELYTWG 745


>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
           garnettii]
          Length = 816

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 143/294 (48%), Gaps = 43/294 (14%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HT+I ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CIKALKPE-KVKFAACGRTHTIISTEGGNVYATGGNNEGQLGLGDTDERDTFHLISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTEDGQLFMWGDNSEGQIGLKDVTNVCVPHQVTIGKPISWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGS---TNDQLRPSYASSLMDIQVEQIAAGLWH 352
           CG  HSA VT  G L TFG    G+ G  S   TN ++ P   SS+ D +V Q+A G  H
Sbjct: 197 CGYYHSAFVTIDGELYTFGESESGKLGLPSQLLTNHRI-PQLVSSIPD-KVIQVACGGGH 254

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLT 411
           T+ ++ E  VY FG  QFGQLG G    E + PK+LE   ++ ++   +SCG  H+A++T
Sbjct: 255 TLVLTEES-VYAFGLGQFGQLGLGTFIFETSEPKVLE--YVKGEKIISISCGENHTAMIT 311

Query: 412 EDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLA 462
           + G + ++G  ++G+LGLG  +  +R  P+   +   F+ + +ACG  H L+ A
Sbjct: 312 DTGGIYTFGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGGCHMLVFA 365



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 87/168 (51%), Gaps = 2/168 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSA+VT    L  FG   +GQ G GS     +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G D  E     L +      + K +S G+  SA LTED
Sbjct: 100 IISTEGGNVYATGGNNEGQLGLG-DTDERDTFHLISFFTSQHKIKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
           GQ+  WG N  GQ+GL D  +  +P  V I G     I+CG++H+  +
Sbjct: 159 GQLFMWGDNSEGQIGLKDVTNVCVPHQVTI-GKPISWISCGYYHSAFV 205



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 134/281 (47%), Gaps = 40/281 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ I++   +++ +G    GQLGLGS+   V  P  I  L     + AA G+  
Sbjct: 40  LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKA-AVNKPTCIKALKPEKVKFAACGRTH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            ++  +G        N+ G+ G                  +  +K+++ G   SA +T+ 
Sbjct: 99  TIISTEGGNVYATGGNNEGQLGLGDTDERDTFHLISFFTSQHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G     +   P   +  +   +  I+ G +H+  ++++G +Y FG 
Sbjct: 159 GQLFMWGDNSEGQIGLKDVTNVCVPHQVT--IGKPISWISCGYYHSAFVTIDGELYTFGE 216

Query: 368 NQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           ++ G+LG       N  +P+L+ +      +   V+CG  H+ VLTE+  V ++G  ++G
Sbjct: 217 SESGKLGLPSQLLTNHRIPQLVSSI---PDKVIQVACGGGHTLVLTEES-VYAFGLGQFG 272

Query: 426 QLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
           QLGLG  I + + P ++  + G    +I+CG  HT ++ +T
Sbjct: 273 QLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMITDT 313



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 28/158 (17%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P LV+  P  K+ +VA GG HTL+L++   V+ +G G  GQLGLG+ I     P +   L
Sbjct: 235 PQLVSSIPD-KVIQVACGGGHTLVLTEES-VYAFGLGQFGQLGLGTFIFETSEPKV---L 289

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           E+    K                     +  I+CG  H+A++TD G + TFG G +G+ G
Sbjct: 290 EYVKGEK---------------------IISISCGENHTAMITDTGGIYTFGDGRHGKLG 328

Query: 323 HGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            G  N  ++  P+  S  +   V+ +A G  H +  + 
Sbjct: 329 LGLENFTNRFFPTPCSVFLKFMVQLVACGGCHMLVFAT 366



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR---IKMVP 254
           F T  P ++    G KI  ++ G  HT +++D G ++ +G G  G+LGLG      +  P
Sbjct: 281 FETSEPKVLEYVKGEKIISISCGENHTAMITDTGGIYTFGDGRHGKLGLGLENFTNRFFP 340

Query: 255 TP 256
           TP
Sbjct: 341 TP 342


>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
          Length = 267

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 101/217 (46%), Gaps = 24/217 (11%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           K+ K+ A   +++ +   G V+ WG G  G+LG    +K    P +I             
Sbjct: 59  KLEKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFS--------- 109

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                             V +IA G  HSA  T+ G L T+G G+ GQ GHGS  ++  P
Sbjct: 110 -------------IQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIP 156

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                  DI+V +IA G  HT+ I     VY +G NQ GQLG       N+PK  +    
Sbjct: 157 KKVKEFQDIRVLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQDLSRVNLPK--KIMFF 214

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
             K    + CG +HS  LT +GQV SWG N+YGQLG+
Sbjct: 215 NQKEVVQIQCGKKHSIALTVEGQVYSWGSNEYGQLGI 251



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 10/183 (5%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH-GSTNDQLRPSYAS--SLMDIQVEQIA 347
           +++I     +S  +   G + ++G G +G+ G+      Q  P      S+ +I V +IA
Sbjct: 60  LEKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIA 119

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            G  H+   + +G++Y +G    GQLG G +Q E +PK ++    +  R   ++CG  H+
Sbjct: 120 LGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKE--FQDIRVLEIACGDSHT 177

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAET 464
             +     V  WG+N+ GQLG  D    N+P    I  F  +    I CG  H++ L   
Sbjct: 178 MAIISGNLVYGWGFNQAGQLGFQDLSRVNLPK--KIMFFNQKEVVQIQCGKKHSIALTVE 235

Query: 465 TQI 467
            Q+
Sbjct: 236 GQV 238



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 6/135 (4%)

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLL 387
           Q+ P Y       ++E+I A   +++ I  +G V+ +G  +FG+LG   D + +  PK++
Sbjct: 50  QITPDYWQG----KLEKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKII 105

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGF 446
           ET  +++     ++ G  HSA  T  G++ +WG    GQLG G + +  IP  V      
Sbjct: 106 ETFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDI 165

Query: 447 LPRNIACGWWHTLLL 461
               IACG  HT+ +
Sbjct: 166 RVLEIACGDSHTMAI 180


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 40/260 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  + L   +KI  V  G  H LILS  G+ + +       L   + ++          
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFENVLQ---------- 136

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                                        + +I CG  HS  ++  G L  +G  L+GQ 
Sbjct: 137 --------------------------EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQL 170

Query: 322 GHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
           G G        P     L  + + QI+AG  H++ +S+ G +Y +G N+FGQLG G  ++
Sbjct: 171 GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTES 230

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           ++ P L+E   L++++ + V+CG  HSA+LT+DG + ++G  K+GQLG   + +   P L
Sbjct: 231 KDYPSLIEG--LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCL 288

Query: 441 VP-IHGFLPRNIACGWWHTL 459
           V  + G+    IACG WHTL
Sbjct: 289 VAELVGYRVTQIACGRWHTL 308



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 123/244 (50%), Gaps = 34/244 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G ++ WG    GQLGLG            
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 226

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               H  S KD P L+ +G  N         V+ +ACGG HSA++T  G L TFG G +G
Sbjct: 227 ----HTES-KDYPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 273

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L+  +V QIA G WHT+  +S  G+V+ FG  + GQLG G  
Sbjct: 274 QLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRN 436
           + + +P  L   +  S+  K+ S  +    ++   G   +L W   +   + L     R 
Sbjct: 334 RDQLMP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRT 387

Query: 437 IPSL 440
           IP+L
Sbjct: 388 IPTL 391



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 12/136 (8%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE---- 388
           + + L + ++ QI  G +H++ +S  G ++ +G N  GQLG G    +   P+++E    
Sbjct: 131 FENVLQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAG 190

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
            P+ +      +S G  HS  L+  G + SWG N++GQLGLG +  ++ PSL+  +    
Sbjct: 191 VPLAQ------ISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQK 244

Query: 448 PRNIACGWWHTLLLAE 463
              +ACG  H+ LL +
Sbjct: 245 VEFVACGGSHSALLTQ 260


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 36/273 (13%)

Query: 196 DEFFTLSP--CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           DE   L P  C   +N  V+   V  G RHT+ + D G V+  G    GQLG        
Sbjct: 18  DEEVVLEPRRCDFFINKNVR--DVGCGSRHTVFVLDDGTVYTCGCNDLGQLG-------- 67

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
                     H  S + +P           G      +  ++CG  H+  + D G + ++
Sbjct: 68  ----------HDKS-RRKP--------EQVGALDAQIIVAVSCGEAHTLALNDKGQVFSW 108

Query: 314 GWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G  +YGQ G  +  + +R P    SL D+Q+ Q+A G  H++ +S +  ++ +G NQ+GQ
Sbjct: 109 GHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQ 168

Query: 373 LGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           LG G++ + E  P+ +++  L       ++ G  HS  LT  G +  WG NK+GQLGL D
Sbjct: 169 LGLGLEIKKECAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTD 226

Query: 432 SIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
             DRN+P+L+  +      +I CG  HT  L +
Sbjct: 227 ETDRNVPALLKSLRSQKIIHICCGEDHTAALTK 259



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 146/357 (40%), Gaps = 58/357 (16%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P   R C     K+V   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEVVLEP---RRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCG-CNDLGQ--LGHDKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
              PE         +V  + G AH +++ + G+V++WG                 G    
Sbjct: 72  RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG-------------HAVYGQIGL 118

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-----------T 200
            +  +   +P      SD +  +       + +  ++S+  + G   +            
Sbjct: 119 STAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKE 178

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
            +P  +    G+    +AAGG H+  L+  G ++GWG    GQLGL              
Sbjct: 179 CAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE----------- 227

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                 + ++ P L++  S+ S        +  I CG  H+A +T  G + TFG G YGQ
Sbjct: 228 ------TDRNVPALLK--SLRSQK------IIHICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTG 376
            GH STN ++ P     LM   V QIA G  HT+  +   GR+Y FG    GQLGTG
Sbjct: 274 LGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 118/261 (45%), Gaps = 38/261 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
           I  V+ G  HTL L+D GQV+ WG+   GQ+GL +  + +  P  I  L        A G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACG 145

Query: 269 KDRPLLVRQGS------VNSSGKAGR----------SYVK--------EIACGGRHSAVV 304
               L + + S       N  G+ G            ++K         IA GG HS  +
Sbjct: 146 HHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFAL 205

Query: 305 TDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           T +GA+  FGWG   +GQ G     D+  P+   SL   ++  I  G  HT  ++ EG V
Sbjct: 206 TISGAI--FGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGV 263

Query: 363 YVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
           + FG   +GQLG      E  P K+ E   L       ++CG +H+ A +   G++ S+G
Sbjct: 264 FTFGAGGYGQLGHNSTNHEVNPRKVFE---LMGSIVTQIACGRQHTLAFVPSSGRIYSFG 320

Query: 421 WNKYGQLGLGDSIDRNIPSLV 441
               GQLG G +I+R  P  V
Sbjct: 321 LGGNGQLGTGSTINRKSPFTV 341



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P      ++  V  +  G  HTV +  +G VY  G 
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   D++   P+  +   L+++    VSCG  H+  L + GQV SWG   YGQ+
Sbjct: 61  NDLGQLGH--DKSRRKPE--QVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  +       +ACG  H+L L++ + I
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIV---QVACGHHHSLALSKDSDI 158


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            I+CG  HSA++T++G L TFG   +GQ G G      +P    SL    V  +A G  H
Sbjct: 40  HISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSH 99

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           T+  +  GR+Y FG    GQLGTG  Q    P+L+  P    ++ K++S G  HSA LT 
Sbjct: 100 TIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLINLP---EQKYKLLSAGTDHSAALTT 156

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           DG +  WG    GQLGLG++     P  +  H  +   ++CG++HT ++ +
Sbjct: 157 DGTLYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSW-VSCGYYHTAIVTD 206



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 154/358 (43%), Gaps = 64/358 (17%)

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           + G  H   +TE+G +YT+G          + D+G  G      T K   + + +    +
Sbjct: 42  SCGDEHSAIITESGRLYTFG----------SNDWGQLGLGHMKPTTKPGCVKSLKQEGVN 91

Query: 170 KRAGEEVVKRRKTSSAREESENPAS------GDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
             A         T + R  S    S      GD     SP L+ L P  K   ++AG  H
Sbjct: 92  LVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLINL-PEQKYKLLSAGTDH 150

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           +  L+  G ++ WG G EGQLGLG+    V TP  +                        
Sbjct: 151 SAALTTDGTLYMWGSGSEGQLGLGN-TDSVETPKELKF---------------------- 187

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR----PSYASSLM 339
                S V  ++CG  H+A+VTD G L TFG   +G+ G   T DQL     P +  S+ 
Sbjct: 188 ----HSSVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLG--LTEDQLEDTTTPKHVESIT 241

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI------LE 393
           + +++ +A G  HT  IS  G +Y FG    GQLG G       P LL+  +      L 
Sbjct: 242 E-KIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGNG-------PSLLQLSLPQKVARLS 293

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
             + K VSCG  H+AV+TE G + ++G  ++G+LG+ +    NI     +  F   ++
Sbjct: 294 EHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGISEEDFCNIFKPCKVSRFTSFDV 351



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 32/253 (12%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           K   ++ G  H+ I+++ G+++ +G    GQLGLG    M PT                 
Sbjct: 37  KAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLG---HMKPT----------------- 76

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
              + G V S  + G   V  +ACG  H+ V T AG L +FG G  GQ G G       P
Sbjct: 77  --TKPGCVKSLKQEG---VNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSP 131

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               +L + + + ++AG  H+  ++ +G +Y++G    GQLG G   +   PK L+    
Sbjct: 132 QLI-NLPEQKYKLLSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKELKF--- 187

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI--DRNIPSLVPIHGFLPRN 450
                  VSCG  H+A++T+DG++ ++G  ++G+LGL +    D   P  V       + 
Sbjct: 188 -HSSVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEKIKL 246

Query: 451 IACGWWHTLLLAE 463
           +ACG  HT ++++
Sbjct: 247 VACGGAHTAVISD 259



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 110/289 (38%), Gaps = 86/289 (29%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   + A +  G L  WGS   EGQ  L +    ETP+   L   +SV   + G+ H   
Sbjct: 147 GTDHSAALTTDGTLYMWGSGS-EGQLGLGNTDSVETPKE--LKFHSSVSWVSCGYYHTAI 203

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           VT+ G++YT+G +E          FG  G            L  +Q         E+   
Sbjct: 204 VTDDGKLYTFGEKE----------FGKLG------------LTEDQL--------EDTTT 233

Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
            +   S  E                         KI  VA GG HT ++SD+G ++ +G 
Sbjct: 234 PKHVESITE-------------------------KIKLVACGGAHTAVISDVGNLYTFGD 268

Query: 239 GGEGQLGLGSRIKMVPTPHLIPCL-EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
           G  GQLG G  +  +  P  +  L EH                           K ++CG
Sbjct: 269 GMHGQLGNGPSLLQLSLPQKVARLSEHKC-------------------------KYVSCG 303

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTN--DQLRPSYASSLMDIQVE 344
             H+AV+T+ GA+ TFG G +G+ G    +  +  +P   S      V+
Sbjct: 304 DNHTAVITEKGAMYTFGDGRHGKLGISEEDFCNIFKPCKVSRFTSFDVQ 352



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 13/102 (12%)

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G ++ FG ++F         A+N+P       + + +A  +SCG  HSA++TE G++ ++
Sbjct: 13  GAIFTFGKSRF---------ADNLPSKF---WIRNDKAMHISCGDEHSAIITESGRLYTF 60

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-IACGWWHTLL 460
           G N +GQLGLG       P  V        N +ACG  HT++
Sbjct: 61  GSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIV 102


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 163/397 (41%), Gaps = 59/397 (14%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
           G   EK+P+  P    +  G   K+V CGG     L     G + T GS +  GQ  L  
Sbjct: 13  GIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLM--HDGSVYTCGS-NSCGQ--LGH 67

Query: 89  GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
            K G +PE         +   + G  H ++V E G+++ WG              G  G 
Sbjct: 68  DKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGA-------------GDGGQ 114

Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----NPASGD------E 197
               +T     +P       D R  + +   +   +   + +        SG       E
Sbjct: 115 LGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGE 174

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
              L P  +    G+ + ++ AGG H+  LS  G V+GWG    GQLGL  +        
Sbjct: 175 PSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDK-----QDR 229

Query: 258 LIPC-LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
            +PC ++   S K                     V  I+CG  H+A +T  G L TFG G
Sbjct: 230 AVPCHIKFLRSQK---------------------VVYISCGDEHTAALTKDGGLFTFGDG 268

Query: 317 LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGT 375
            +GQ GHGSTN +L P     LM  +V QIA G  HT+  +   G VY FG N  GQLGT
Sbjct: 269 SWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGT 328

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           G+      P  ++T +  S+  +V++ G   S +  E
Sbjct: 329 GILGDARSPFPVKTSV-PSEDFRVINIGKSLSPINYE 364



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 126/262 (48%), Gaps = 30/262 (11%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           +SP +V      KIT V+ G  H++ +++ GQ++ WG G  GQLGLG+    V  P L+ 
Sbjct: 72  ISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVK 131

Query: 261 CL-EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            L +H  S                         ++ CG +H   ++  G L T+G    G
Sbjct: 132 RLCDHRIS-------------------------QVMCGNQHCVALSRDGQLFTWGQNTSG 166

Query: 320 QCGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           Q G G     +L P    SL  I + QI AG  H+  +S+ G V+ +G N+ GQLG    
Sbjct: 167 QLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDK 226

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           Q   VP       L S++   +SCG  H+A LT+DG + ++G   +GQLG G +    +P
Sbjct: 227 QDRAVP--CHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLP 284

Query: 439 -SLVPIHGFLPRNIACGWWHTL 459
             ++ + G     IACG  HTL
Sbjct: 285 RRVLELMGTEVSQIACGRHHTL 306



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 29/196 (14%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG   +GQLG+G     V  P    C  H  SG+                     +KE+ 
Sbjct: 4   WGNAKDGQLGIGVEKNPVFEPR--NC--HVFSGRG--------------------LKEVG 39

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGG+HS  +   G++ T G    GQ GH      + P    +L   ++  ++ G  H++ 
Sbjct: 40  CGGQHSVFLMHDGSVYTCGSNSCGQLGHDKAG--ISPEVVGALDTQKITMVSCGRGHSMA 97

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
           ++ +G+++ +G    GQLG G  +    +P+L++   L   R   V CG +H   L+ DG
Sbjct: 98  VNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKR--LCDHRISQVMCGNQHCVALSRDG 155

Query: 415 QVLSWGWNKYGQLGLG 430
           Q+ +WG N  GQLGLG
Sbjct: 156 QLFTWGQNTSGQLGLG 171


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 130/273 (47%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL P LV       + K+AA   G H L L+  G+V+ WG G   +LG G  + +   P 
Sbjct: 458 TLVPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPL-EEPK 516

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 517 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 556

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ D+  P   + L  ++V  +A  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 557 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 616

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 617 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 674

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 675 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 707



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 2799 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 2841

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 2842 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 2893

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 2894 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 2953

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 2954 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3011

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3012 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3071

Query: 457  HTL 459
            H++
Sbjct: 3072 HSV 3074



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 3779 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3838

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 3839 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3898

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 3899 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3958

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 3959 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4016

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4017 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4066



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 3794 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 3853

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 3854 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 3897

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 3898 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 3940

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 3941 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 3992

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 3993 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4050

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4051 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4085



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2750 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 2807

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 2808 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 2857

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 2858 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 2917

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 2918 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 2958

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 2959 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3012

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 3013 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3070

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3071 SHSVAWT 3077



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 36/269 (13%)

Query: 202  SPC--LVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            +PC  L TL P   I     GG  TL+ ++  G+++  GYG  G+LG     + V TP L
Sbjct: 3729 TPCEALATLRPVQLI-----GGEQTLLAVTADGKLYATGYGAGGRLG-IGGTESVSTPTL 3782

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + +++ +VNS              GG+H   ++  G + ++G    
Sbjct: 3783 LESIQH--------VFIKKVAVNS--------------GGKHCLALSSEGEVYSWGEAED 3820

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+LG    
Sbjct: 3821 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 3880

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G S    
Sbjct: 3881 EDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 3938

Query: 437  IPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            +P  +  + G     + CG   ++ L ++
Sbjct: 3939 VPMKIDSLTGLGVVKVECGSQFSVALTKS 3967



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 29/218 (13%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +  +A G  ++  ++  G+++ WG G  G+LG GS                 +  + 
Sbjct: 527 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS-----------------SEDEA 569

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
            P+LV       +G  G   + ++ACG     +  VT+ G + ++G G YG+ G G ++ 
Sbjct: 570 IPMLV-------AGLKGLKVI-DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 621

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P     L D+ V ++  G   ++ ++ +G+VY +G     +LG G ++    PKLLE
Sbjct: 622 CKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 681

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
              L+ K+   V+ G+ H   LTED +V SWG N   Q
Sbjct: 682 G--LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 717



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2691 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2741

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2742 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 2781

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 2782 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 2841

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 2842 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 2899

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 2900 LLGHRVIQVACGSRDAQTLALTDE 2923



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 130/325 (40%), Gaps = 65/325 (20%)

Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           +VVK AA     H +++   GEVY+WG  +        R  G   +   +     SA   
Sbjct: 471 NVVKIAAHSDGHHYLALAATGEVYSWGCGD-------GRRLGHGDTVPLEEPKVISAF-- 521

Query: 163 EQAPPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTLSPCL 205
                S K+AG+ VV      T SA   +E               + +S DE     P L
Sbjct: 522 -----SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI---PML 573

Query: 206 VTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           V    G+K+  VA  +G   TL +++ GQVW WG G  G+LG G       TP LI  L+
Sbjct: 574 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIEKLQ 632

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
                                      V ++ CG + S  +T  G + ++G G   + GH
Sbjct: 633 DLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 668

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G+      P     L   +V  +AAG  H + ++ +  V+ +G N   Q    +   +  
Sbjct: 669 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE 728

Query: 384 PKLLETPILESKRAKVVSCGARHSA 408
           P  L  P L++K    ++CG   S+
Sbjct: 729 PAAL--PGLDTKHIVGIACGPAQSS 751



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 3957 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4015

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4016 CTEDGEVYTWG 4026



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 635 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 693

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 694 GSTHCLALTEDSEVHSWG 711



 Score = 42.7 bits (99), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G    + ++ +G++Y  G    
Sbjct: 3707 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGYGAG 3766

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      +   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 3767 GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 3826

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    ++A G  H+
Sbjct: 3827 NRSPCDRPRVIESLRGIEVVDVAAGGAHS 3855



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)

Query: 22  VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           VY WG   G       T P + P    + +   G  + K V    CG  ++ A +  G+L
Sbjct: 493 VYSWGCGDGRRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 549

Query: 73  ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            TWG          S++DE    L +G  G          +   V   +G A  ++VTE 
Sbjct: 550 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 600

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
           G+V++WG            D+G  G    D       +   Q     K R G +    + 
Sbjct: 601 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 650

Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           K  +  S  + +++    G E     P L+    G K+  VAAG  H L L++  +V  W
Sbjct: 651 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 710

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           G   + Q     R+   P P  +P L+
Sbjct: 711 GSNDQCQHFDTLRVTK-PEPAALPGLD 736



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 3804 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3855

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 3856 ACVTAAGDLYTWG 3868


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 132/291 (45%), Gaps = 48/291 (16%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T  P  V L   + I +VA G  HTL LS  GQV+ WG     + G  S+          
Sbjct: 161 TFKP--VELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRGDRSQ---------- 208

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
              E   + K +P+L++    + +GK     +K+I CG  HS  + D G L ++G G  G
Sbjct: 209 ---ERKDNAKYKPVLLQ----SFAGKK----IKQIDCGDFHSLALDDNGTLYSWGVGEKG 257

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           +CGHG   DQ  P          + QI AG  HT+ I+ + +VY +G  ++GQ G G  +
Sbjct: 258 ECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFE 317

Query: 380 AENVPKLLETP----------------ILES----KRAKVVSCGARHSAVLTEDGQVLSW 419
              +P+L+  P                ILE      + K ++ G  H+ VLT  GQ+ S+
Sbjct: 318 NTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSF 377

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAETTQI 467
           G+N+ GQLG     +   P LV   G L      +A G  H+L L     +
Sbjct: 378 GYNQQGQLGHNTVDNYCRPKLVE--GMLNHKTVQVAAGRNHSLCLTNKNDV 426



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 192/480 (40%), Gaps = 121/480 (25%)

Query: 14  MEECKETVVYMWGYLPGTSPE-----KSPILSPIPARLCGGDSWKDV--CGGGCGFALAT 66
           +++ K+   Y+W +   T  E      + +L  +P R+ G    K +    GG    L T
Sbjct: 76  LDQIKKYHAYVWSFGQNTKGELGTGHYNEVL--MPERVRGLPKLKVIFLSSGGKHSGLVT 133

Query: 67  SESGKLITWGSA--DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
            E GKL   GS   D  G   +T+G   +T +P  L T+  + + A G  H +++++ G+
Sbjct: 134 -EDGKLWMCGSNLHDKLGLEGITTGSK-KTFKPVELLTQIFIKQVACGDYHTLALSKEGQ 191

Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
           VY WG                 GS                             KR   S 
Sbjct: 192 VYVWG-----------------GSLHN--------------------------KRGDRSQ 208

Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
            R+++             P L+    G KI ++  G  H+L L D G ++ WG G +G+ 
Sbjct: 209 ERKDNA---------KYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGEC 259

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G G + +   TP  I   +                    GK     + +I  G  H+  +
Sbjct: 260 GHG-KFEDQETPQRIKFFD--------------------GKI----ITQIEAGNHHTLAI 294

Query: 305 TDAGALLTFGWGLYGQCG-----------------HGSTNDQLRPSYASSLMDI-----Q 342
           T    +  +G G YGQCG                  G+    L  S    +++      +
Sbjct: 295 TADNQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPK 354

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
           ++QIAAG  HT+ ++  G+++ FG NQ GQLG         PKL+E  +L  K  + V+ 
Sbjct: 355 IKQIAAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVE-GMLNHKTVQ-VAA 412

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR----NIPSLVPIHGFLPRNIACGWWHT 458
           G  HS  LT    V + G N+YGQ GL D   R    ++ SL+ ++ F    +  G +H+
Sbjct: 413 GRNHSLCLTNKNDVYACGNNQYGQCGLPDREMRKTFSHVLSLLSVNSF---KLYAGGFHS 469



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 83/215 (38%), Gaps = 61/215 (28%)

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYA-------------------------------SSLMD 340
           +FG    G+ G G  N+ L P                                  S+L D
Sbjct: 88  SFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNLHD 147

Query: 341 -----------------------IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
                                  I ++Q+A G +HT+ +S EG+VYV+GG+   + G   
Sbjct: 148 KLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRGDRS 207

Query: 378 ----DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
               D A+  P LL++     K+ K + CG  HS  L ++G + SWG  + G+ G G   
Sbjct: 208 QERKDNAKYKPVLLQS--FAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGKFE 265

Query: 434 DRNIPSLVPIH-GFLPRNIACGWWHTLLLAETTQI 467
           D+  P  +    G +   I  G  HTL +    Q+
Sbjct: 266 DQETPQRIKFFDGKIITQIEAGNHHTLAITADNQV 300



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 5/109 (4%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           V+ FG N  G+LGTG      +P+ +    L   +   +S G +HS ++TEDG++   G 
Sbjct: 86  VWSFGQNTKGELGTGHYNEVLMPERVRG--LPKLKVIFLSSGGKHSGLVTEDGKLWMCGS 143

Query: 422 NKYGQLGLGDSIDRNIPSLVPIH---GFLPRNIACGWWHTLLLAETTQI 467
           N + +LGL      +  +  P+        + +ACG +HTL L++  Q+
Sbjct: 144 NLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQV 192


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 115/251 (45%), Gaps = 28/251 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  I  VA G  H++ LSD GQV+ WG G +GQLGL +    V  P LI           
Sbjct: 83  GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK---------- 132

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQ 329
                         K  +  + +I+CG  H   +   G   T+G   YGQ G G     Q
Sbjct: 133 --------------KLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQ 178

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
             P    SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P     
Sbjct: 179 ASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESP--CHV 236

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLP 448
            +L S++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G   
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 449 RNIACGWWHTL 459
             IACG  HTL
Sbjct: 297 SQIACGRHHTL 307



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 142/340 (41%), Gaps = 69/340 (20%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
           CGG     L   E G++ T G  + +GQ  L     G  PEP        +V  A G +H
Sbjct: 41  CGGNHSVFLL--EDGEVYTCG-LNTKGQ--LGHESEGSKPEPIGALAGQHIVHVACGESH 95

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
            V++++ G+V++WG              GS G       G  +       P   K+  ++
Sbjct: 96  SVALSDQGQVFSWGA-------------GSDGQL-----GLTTIEDAVTVPRLIKKLNQQ 137

Query: 176 VVKRRKTSSAREESENPASGDEFFT------------------LSPCLVTLNPGVKITKV 217
            +   + S         A+  +FFT                   SP  V    G+ + +V
Sbjct: 138 TI--LQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQV 195

Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
           AAGG H+  LS  G V+GWG    GQLGL                      ++ P  V+ 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGKNSSGQLGLSDE-----------------RDRESPCHVK- 237

Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
             +  S K     V  I+CG  H+AV+T +G + TFG G  GQ GH S ND++ P     
Sbjct: 238 --LLRSQK-----VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE 290

Query: 338 LMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTG 376
           LM  +V QIA G  HT+  +   G +Y FG    GQLGTG
Sbjct: 291 LMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 96/197 (48%), Gaps = 30/197 (15%)

Query: 236 WGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
           WGY   GQ G+GS ++ ++P P +   +       DR                   VKE+
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIH------DRN------------------VKEV 39

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           ACGG HS  + + G + T G    GQ GH S     +P    +L    +  +A G  H+V
Sbjct: 40  ACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS--KPEPIGALAGQHIVHVACGESHSV 97

Query: 355 CISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
            +S +G+V+ +G    GQLG T ++ A  VP+L++   L  +    +SCG  H   L  D
Sbjct: 98  ALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKK--LNQQTILQISCGNWHCLALAAD 155

Query: 414 GQVLSWGWNKYGQLGLG 430
           GQ  +WG N YGQLGLG
Sbjct: 156 GQFFTWGQNSYGQLGLG 172



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 42/260 (16%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG-KDR 271
            + +VA GG H++ L + G+V+  G   +GQLG                  H + G K  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HESEGSKPE 76

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P+          G     ++  +ACG  HS  ++D G + ++G G  GQ G  +  D + 
Sbjct: 77  PI----------GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVT 126

Query: 332 -PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLET 389
            P     L    + QI+ G WH + ++ +G+ + +G N +GQLG G +  ++  P+ +++
Sbjct: 127 VPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS 186

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
             L+      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R
Sbjct: 187 --LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE----SPCHVKLLR 240

Query: 450 N-----IACGWWHTLLLAET 464
           +     I+CG  HT +L ++
Sbjct: 241 SQKVVYISCGEEHTAVLTKS 260



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 8/162 (4%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G+  +GQ G GS    +   P     + D  V+++A G  H+V +  +G VY  G 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   + ++  P       L  +    V+CG  HS  L++ GQV SWG    GQL
Sbjct: 61  NTKGQLGHESEGSKPEP----IGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL 116

Query: 428 GLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           GL    D   +P L+  ++      I+CG WH L LA   Q 
Sbjct: 117 GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQF 158



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 112/273 (41%), Gaps = 31/273 (11%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAHCVSVTE 121
           ++A S+ G++ +WG+  D GQ  LT+ +   T P       + ++++ + G  HC+++  
Sbjct: 96  SVALSDQGQVFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAA 154

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
            G+ +TWG +       + ++  S  S Q+        +P  Q       +    +    
Sbjct: 155 DGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPLAQVAAGGAHSFALSLSGAV 211

Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
               +  S      DE    SPC V L    K+  ++ G  HT +L+  G V+ +G G  
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           GQLG  S    V                 R +L   G          S V +IACG  H+
Sbjct: 272 GQLGHDSMNDEV---------------NPRRVLELMG----------SEVSQIACGRHHT 306

Query: 302 -AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
            A V  +G +  FG G  GQ G G T +   PS
Sbjct: 307 LAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPS 339


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R  +                 D+
Sbjct: 3070 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3112

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV               ++++ACG  HSA ++  G L T+G G YG+ GHG    QL+
Sbjct: 3113 PRLVEALRAKK--------IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLK 3164

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L   +V Q+A G     T+ ++ +G V+ +G   FG+LG G  +  + P  +E 
Sbjct: 3165 PKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIER 3224

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L       + CGA+ S  LT  G+V +WG   Y +LG G   D+++    PI G   R
Sbjct: 3225 --LSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLRGR 3280

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + +  Q+
Sbjct: 3281 RVIHVAVGALHCLAVTDAGQV 3301



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 134/309 (43%), Gaps = 79/309 (25%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R+                   DR
Sbjct: 4132 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4174

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV   +  S        V +IACG  HSA +T +G +LT+G G YG+ GHG + DQLR
Sbjct: 4175 PKLVEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 4226

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 4227 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 4286

Query: 390  --------------------------------------------------PILESKRAKV 399
                                                                L+ K+   
Sbjct: 4287 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4346

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            ++ G+ H    ++ G+V +WG N  GQLG G       P LV  + G     + CG  HT
Sbjct: 4347 IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHT 4406

Query: 459  LLLAETTQI 467
            L L+ T+Q+
Sbjct: 4407 LALS-TSQL 4414



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 32/271 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            T S  +  L P      +A G +   I+S  G+V+  G G  G+LGLG     VP PH +
Sbjct: 3008 TFSQTISRLRP----IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQL 3062

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            P L           +V++ +V+S              GG+H+  +T  G + ++G G  G
Sbjct: 3063 PVLHQ--------YVVKKVAVHS--------------GGKHALALTLDGKVFSWGEGEDG 3100

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            + GHG+     +P    +L   ++  +A G  H+  IS +G +Y +G  ++G+LG G + 
Sbjct: 3101 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNV 3160

Query: 380  AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
             +  PKL+    L  +R   V+CG+R   +  LTEDG V SWG   +G+LG G S   + 
Sbjct: 3161 TQLKPKLVVA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT 3218

Query: 438  PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P  +  + G     I CG   +L L    ++
Sbjct: 3219 PHEIERLSGIGVVQIECGAQFSLALTRAGEV 3249



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 34/227 (14%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            ++GWG+   GQLG   GSRIK  PT    PC    A    RP+                 
Sbjct: 4047 IYGWGHNHRGQLGGLEGSRIK-TPT----PC---EALSLLRPV----------------- 4081

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--A 348
              ++A G +    VT  G L   G+G  G+ G G ++    P+   SL  + V+++A  +
Sbjct: 4082 --QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNS 4139

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G  H + ++ EG VY +G  + G+LG G   + + PKL+E   L       ++CG+ HSA
Sbjct: 4140 GGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH--LNGMSVADIACGSAHSA 4197

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
             +T  G VL+WG  +YG+LG GDS D+  P LV  + G+   +IACG
Sbjct: 4198 AITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4244



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 126/308 (40%), Gaps = 35/308 (11%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQA 165
            V   +G  HC+++T  GEVY WG  E        R         +   G   A +    A
Sbjct: 4135 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA 4194

Query: 166  PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGRH 223
              +   A   V+   K    R        GD    L P LV    G +   +A  +G   
Sbjct: 4195 HSAAITASGHVLTWGKGRYGRL-----GHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQ 4249

Query: 224  TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
            TL ++D   VW WG G  G+LG G                  + G   P  +        
Sbjct: 4250 TLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKLPYKIE------- 4285

Query: 284  GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              AG   VK + CG + S  +T +GA+ T+G G + + GHGS +   RP   ++L   ++
Sbjct: 4286 SLAGLGVVK-VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4344

Query: 344  EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
              IA G  H V  S  G VY +G N  GQLG G   A   P+L+    L+ K    V+CG
Sbjct: 4345 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCG 4402

Query: 404  ARHSAVLT 411
            + H+  L+
Sbjct: 4403 SAHTLALS 4410



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 33/203 (16%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           GRH L +      + WG G + +LG G +  + VPT   I  LE                
Sbjct: 622 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTK--IAALEQHC------------- 666

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                      V+ + CG  +SA +T  G LLT+G G Y + GHG+++D+  P+   +L 
Sbjct: 667 -----------VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS 715

Query: 340 DIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           D  V  +A  +G  H++ ++ EG V+ +G   +G+LG G       P L+E+      R 
Sbjct: 716 DHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVES----LPRV 771

Query: 398 KVVSCGARHSAVLTEDGQVLSWG 420
           + V  G++ S  L+ +GQ+ SWG
Sbjct: 772 QRVFAGSQFSLALSSEGQLYSWG 794



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 146/367 (39%), Gaps = 60/367 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
             GG       S+ GK+   G   +     L  G     P P  LP     VVK  A   G
Sbjct: 3022 AGGSKSLFIVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 3078

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H +++T  G+V++WG  E           G  G   + +  K   +   +A    K+ 
Sbjct: 3079 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 3124

Query: 173  GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
             +       +++   + E              GD    L P LV    G ++ +VA G R
Sbjct: 3125 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSR 3184

Query: 223  --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
               TL L++ G V+ WG G  G+LG G                  + G D P  + +  +
Sbjct: 3185 DAQTLALTEDGAVFSWGDGDFGKLGRG-----------------GSEGSDTPHEIER--L 3225

Query: 281  NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
            +  G      V +I CG + S  +T AG + T+G G Y + GHG      +P     L  
Sbjct: 3226 SGIG------VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRG 3279

Query: 341  IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
             +V  +A G  H + ++  G+VY +G N  GQ G+G       P L+    L++     V
Sbjct: 3280 RRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG--LDAVFVNRV 3337

Query: 401  SCGARHS 407
            +CG+ HS
Sbjct: 3338 ACGSSHS 3344



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+++ ++  ++   IA G      +S +G+VY  G    G+LG GV    NVP   + P+
Sbjct: 3007 PTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPV 3064

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT DG+V SWG  + G+LG G+    + P LV  +     
Sbjct: 3065 LHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKI 3124

Query: 449  RNIACGWWHT 458
            R++ACG  H+
Sbjct: 3125 RDVACGSSHS 3134



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 65/146 (44%)

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           C GRH   +       ++G G   + GHG T+ +  P+  ++L    V+ +  G  ++  
Sbjct: 620 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 679

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           I+  G +  +G   + +LG G     ++P L+            +  G  HS  LT +G 
Sbjct: 680 ITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGL 739

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV 441
           V +WG   YG+LG G+      P LV
Sbjct: 740 VFAWGDGDYGKLGNGNCNGSLQPILV 765



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 66/222 (29%)

Query: 46   LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
            L G  +    CG G    L  ++   + +WG  D     Y   G+ G      P   E+ 
Sbjct: 4233 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4287

Query: 105  ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
                VVK   G    V++T++G VYTWG                 G F +   G      
Sbjct: 4288 AGLGVVKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4325

Query: 162  TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
                         + V+R K  +A +                       G KI  +A G 
Sbjct: 4326 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4351

Query: 222  RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             H +  SD G+V+ WG   EGQLG G+ +  +  P L+  L+
Sbjct: 4352 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4392



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 41/219 (18%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV       +  VA  +G  H+L L+  G V+ WG G  G+LG G+            
Sbjct: 708 PTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGN------------ 755

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                 +G  +P+LV               V+ +  G + S  ++  G L  + WG    
Sbjct: 756 -----CNGSLQPILVE----------SLPRVQRVFAGSQFSLALSSEGQL--YSWGKATC 798

Query: 321 CGHGSTNDQLR----PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            GH      ++    P   SSL   ++  +A  + H + +S  G V+ +G N   Q+   
Sbjct: 799 LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPA 858

Query: 377 VDQAENVPKLLETPILESK---RAKVVSCGARHSAVLTE 412
              +E    LL TPIL S     A  ++C +  S V T+
Sbjct: 859 SVSSE---PLLRTPILVSLPTFPASGIACTSAQSLVWTQ 894



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 90/228 (39%), Gaps = 37/228 (16%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAA-- 110
           GC ++ A +  G L+TWG       +Y   G HG + +   LPT      +  VV  A  
Sbjct: 673 GCSYSAAITCGGNLLTWGRG-----TYARLG-HGNSDD-RSLPTLVVALSDHMVVDVALG 725

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
           +G AH +++T  G V+ WG            D+G  G+   +  G    +  E  P   +
Sbjct: 726 SGDAHSLALTSEGLVFAWG----------DGDYGKLGN--GNCNGSLQPILVESLPRVQR 773

Query: 171 RAGEEVVKRRKTSSAREESENPAS--GDEFFTLS------PCLVTLNPGVKITKVAAGGR 222
                      +S  +  S   A+  G +    S      P LV+     +I  VA    
Sbjct: 774 VFAGSQFSLALSSEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVA 833

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIK--MVPTPHLIPCLEHAASG 268
           H L LS  G+V+GWG     Q+   S     ++ TP L+      ASG
Sbjct: 834 HCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASG 881


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 36/273 (13%)

Query: 196 DEFFTLSP--CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           DE   L P  C   +N  V+   V  G RHT+ + D G V+  G    GQLG        
Sbjct: 18  DEEVVLEPRRCDFFINKNVR--DVGCGSRHTVFVLDDGTVYTCGCNDLGQLG-------- 67

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
                     H  S + +P           G      +  ++CG  H+  + D G + ++
Sbjct: 68  ----------HDKS-RRKP--------EQVGALDAQIIVAVSCGEAHTLALNDKGQVFSW 108

Query: 314 GWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G  +YGQ G  +  + +R P    SL D+Q+ Q+A G  H++ +S +  ++ +G NQ+GQ
Sbjct: 109 GHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQ 168

Query: 373 LGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           LG G++ + E  P+ +++  L       ++ G  HS  LT  G +  WG NK+GQLGL D
Sbjct: 169 LGLGLEIKKECAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTD 226

Query: 432 SIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
             DRN+P+L+  +      +I CG  HT  L +
Sbjct: 227 ETDRNVPALLKSLRSQKIIHICCGEDHTAALTK 259



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 146/357 (40%), Gaps = 58/357 (16%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P   R C     K+V   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEVVLEP---RRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCG-CNDLGQ--LGHDKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
              PE         +V  + G AH +++ + G+V++WG                 G    
Sbjct: 72  RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGH-------------AVYGQIGL 118

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-----------T 200
            +  +   +P      SD +  +       + +  ++S+  + G   +            
Sbjct: 119 STAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKE 178

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
            +P  +    G+    +AAGG H+  L+  G ++GWG    GQLGL              
Sbjct: 179 CAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE----------- 227

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                 + ++ P L++  S+ S        +  I CG  H+A +T  G + TFG G YGQ
Sbjct: 228 ------TDRNVPALLK--SLRSQK------IIHICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTG 376
            GH STN ++ P     LM   V QIA G  HT+  +   GR+Y FG    GQLGTG
Sbjct: 274 LGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 118/261 (45%), Gaps = 38/261 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
           I  V+ G  HTL L+D GQV+ WG+   GQ+GL +  + +  P  I  L        A G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACG 145

Query: 269 KDRPLLVRQGS------VNSSGKAGR----------SYVK--------EIACGGRHSAVV 304
               L + + S       N  G+ G            ++K         IA GG HS  +
Sbjct: 146 HHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFAL 205

Query: 305 TDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           T +GA+  FGWG   +GQ G     D+  P+   SL   ++  I  G  HT  ++ EG V
Sbjct: 206 TISGAI--FGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGV 263

Query: 363 YVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
           + FG   +GQLG      E  P K+ E   L       ++CG +H+ A +   G++ S+G
Sbjct: 264 FTFGAGGYGQLGHNSTNHEVNPRKVFE---LMGSIVTQIACGRQHTLAFVPSSGRIYSFG 320

Query: 421 WNKYGQLGLGDSIDRNIPSLV 441
               GQLG G +I+R  P  V
Sbjct: 321 LGGNGQLGTGSTINRKSPFTV 341



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P      ++  V  +  G  HTV +  +G VY  G 
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   D++   P+  +   L+++    VSCG  H+  L + GQV SWG   YGQ+
Sbjct: 61  NDLGQLGH--DKSRRKPE--QVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  +       +ACG  H+L L++ + I
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIV---QVACGHHHSLALSKDSDI 158


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 32/291 (10%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL---GSRIKMVPTPH 257
           L P  +      +I ++A G  +T++++ +G+++  G    GQLG      R++++P   
Sbjct: 50  LIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLD 109

Query: 258 LIPCLEHAASGKDRPLLVR--------------QGSVNSSG----------KAGRSYVKE 293
                + AA G    L +               Q  +NS              G S V +
Sbjct: 110 AF-VFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQ 168

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWH 352
           IACG +H+  +T+ G L ++G    GQ G G+ T  +++P + S+ + I +  IA G +H
Sbjct: 169 IACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYH 228

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           ++ IS  G V+ +G N FGQLG    Q  N+P  L+T  L++ +    +CG   S  LT 
Sbjct: 229 SIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQT--LQNAKICYAACGEEFSVFLTV 286

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLA 462
           DG V + G   YGQLG G + +  +P  ++ + G     I+CG  HTL L 
Sbjct: 287 DGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALV 337



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 130/276 (47%), Gaps = 43/276 (15%)

Query: 206 VTLNPGVK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           + L PG+      K A G  HTL +++ GQ++ WG   EGQLGL S+  M  +P ++  L
Sbjct: 102 LQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTL 161

Query: 263 ------------EHAASGKDRPLLVRQGSVNSSGKAG----RSY--------------VK 292
                       +HA +  +   L   GS NS G+ G      Y              + 
Sbjct: 162 GTSVVVQIACGMKHAFALTNNGELYSWGS-NSEGQLGLGTDTKYEIKPKFISAFIGIPIA 220

Query: 293 EIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            IACGG HS  ++ +GA+  FGWG   +GQ G   T D+  P    +L + ++   A G 
Sbjct: 221 FIACGGYHSIAISKSGAV--FGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGE 278

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AV 409
             +V ++V+G V+  G   +GQLG G +  E +P+  +   L       +SCG RH+ A+
Sbjct: 279 EFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPR--QVMELMGSTVTQISCGKRHTLAL 336

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG 445
           +   G+V +WG    GQLG   +     P +V  HG
Sbjct: 337 VPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVV--HG 370



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 11/179 (6%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTNDQLRPSYASSLMDIQVEQIAA 348
           +++IACG  ++ V+T  G + + G   YGQ GH  G    QL P   + +     ++ A 
Sbjct: 63  IQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVF----KKAAC 118

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHS 407
           G +HT+ I+  G+++ +G N  GQLG       E+ P++++T  L +     ++CG +H+
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKT--LGTSVVVQIACGMKHA 176

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVPIHGFLP-RNIACGWWHTLLLAET 464
             LT +G++ SWG N  GQLGLG      I P  +     +P   IACG +H++ ++++
Sbjct: 177 FALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKS 235



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 10/161 (6%)

Query: 313 FGWG--LYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           F WG  ++G+ G G   D+  L P         +++QIA G  +TV I+  G +Y  G N
Sbjct: 29  FCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNN 88

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            +GQLG      +   +L   P L++   K  +CGA H+  + E GQ+ SWG N  GQLG
Sbjct: 89  DYGQLG----HEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLG 144

Query: 429 LGD-SIDRNIPSLVPIHGF-LPRNIACGWWHTLLLAETTQI 467
           L   +   + P +V   G  +   IACG  H   L    ++
Sbjct: 145 LNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGEL 185



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           ++ +G    G+LG G  + EN+    E    ++   + ++CG  ++ V+T+ G++ S G 
Sbjct: 28  MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGN 87

Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           N YGQ  LG    R    L+P +  F+ +  ACG +HTL + E  Q+
Sbjct: 88  NDYGQ--LGHEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQL 132



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAHCV 117
           G    LA +E G+L +WGS + EGQ  L S    E+ P        + VV+ A G  H  
Sbjct: 119 GAYHTLAINEWGQLFSWGS-NTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAF 177

Query: 118 SVTEAGEVYTWG 129
           ++T  GE+Y+WG
Sbjct: 178 ALTNNGELYSWG 189


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 115/248 (46%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G   YGQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 159/377 (42%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         AS  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALASDGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G YGQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQF 158


>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Anolis carolinensis]
          Length = 788

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 99/174 (56%), Gaps = 2/174 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           I+CG  H++VVT+ G L  FG   +GQ G GS N   +P+   +L   +V+  A G  HT
Sbjct: 40  ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  + +G VY  GGN  GQLG G D  E     L +   +  + K ++ G+  SAVLTED
Sbjct: 100 LICTEQGNVYAAGGNSEGQLGLG-DTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GQ++ WG N  GQ+GLGD    ++P  V I G     I+CG++H+ L+ +  ++
Sbjct: 159 GQLVMWGDNSEGQIGLGDKAYVSVPHQVDI-GKPVSCISCGYYHSALITQDGEL 211



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 146/293 (49%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
           C+  L P  K+   A G  HTLI ++ G V+  G   EGQLGLG   +   T HLI    
Sbjct: 80  CVKALKP-EKVKLAACGRNHTLICTEQGNVYAAGGNSEGQLGLGD-TEERSTFHLISFFT 137

Query: 263 -EH-----AASGKDRPLLVRQGSV-----NSSGKAG---RSYVKE------------IAC 296
            +H     AA      +L   G +     NS G+ G   ++YV              I+C
Sbjct: 138 KQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDIGKPVSCISC 197

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL---MDIQVEQIAAGLWHT 353
           G  HSA++T  G L TFG    G+ G   +  QL+      L   +  +V ++A G  HT
Sbjct: 198 GYYHSALITQDGELYTFGEPENGKLG--LSPKQLKNHKLPQLVSGISGKVSKVACGGGHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ EG VY FG  Q+GQLG G    E + PK ++   L   +   ++CG  H+A++TE
Sbjct: 256 VVLA-EGDVYTFGLGQYGQLGHGTFVFETSEPKTVDH--LGKHKICHIACGENHTALITE 312

Query: 413 DGQVLSWGWNKYGQLGLGDS--IDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           +G + ++G  ++G+LGLG+    ++ +P+L      F+  ++ACG  H L+ A
Sbjct: 313 NGLMYTFGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACGGCHMLVFA 365



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 42/287 (14%)

Query: 188 ESENPASGDEFFTLSPCLVTLN-------PGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
           E + P SG   FT   C    N          K   ++ G  HT ++++ G+++ +G   
Sbjct: 5   EEQVPESG-AVFTFGKCKFAENVPSKFWFKNDKPLHISCGDEHTSVVTENGKLYMFGSNN 63

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
            GQLG GS+   V  P  +  L        +P                  VK  ACG  H
Sbjct: 64  WGQLGFGSK-NAVNKPTCVKAL--------KP----------------EKVKLAACGRNH 98

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM-DIQVEQIAAGLWHTVCISVE 359
           + + T+ G +   G    GQ G G T ++      S      +++Q+AAG + +  ++ +
Sbjct: 99  TLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTED 158

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G++ ++G N  GQ+G G     +VP  ++      K    +SCG  HSA++T+DG++ ++
Sbjct: 159 GQLVMWGDNSEGQIGLGDKAYVSVPHQVDI----GKPVSCISCGYYHSALITQDGELYTF 214

Query: 420 GWNKYGQLGLGDSIDRN--IPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           G  + G+LGL     +N  +P LV  I G + + +ACG  HT++LAE
Sbjct: 215 GEPENGKLGLSPKQLKNHKLPQLVSGISGKVSK-VACGGGHTVVLAE 260


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 127/261 (48%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R                 S  D+
Sbjct: 3132 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR-----------------STLDK 3174

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV               +++IACG  HSA ++  G L T+G G YG+ GHG    QL+
Sbjct: 3175 PRLVEALRAKK--------IRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 3226

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++L   +V Q+A G     T+ ++ +G V+ +G   FG+LG G  +    P  +E 
Sbjct: 3227 PKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIER 3286

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L       + CGA+ S  LT  G+V +WG   Y +LG G   D+++    PI G   R
Sbjct: 3287 --LSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIAGLRGR 3342

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + +  Q+
Sbjct: 3343 RVIHVAVGALHCLAVTDAGQV 3363



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 134/309 (43%), Gaps = 79/309 (25%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R+                   DR
Sbjct: 4286 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4328

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+   +  S        V +IACG  HSA +T +G +LT+G G YG+ GHG + DQLR
Sbjct: 4329 PKLLEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 4380

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 4381 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 4440

Query: 390  --------------------------------------------------PILESKRAKV 399
                                                                L+ K+   
Sbjct: 4441 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4500

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            ++ G+ H    ++ G+V +WG N  GQLG G       P LV  + G     + CG  HT
Sbjct: 4501 IATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHT 4560

Query: 459  LLLAETTQI 467
            L L+ T+Q+
Sbjct: 4561 LALS-TSQL 4568



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 32/271 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            T S  +  L P      +A G +   ++S  G+V+  G G  G+LGLG     VP PH +
Sbjct: 3070 TFSQTISRLRP----IHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQL 3124

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            P L           +V++ +V+S              GG+H+  +T  G + ++G G  G
Sbjct: 3125 PVLHQ--------YVVKKVAVHS--------------GGKHALALTLDGKVFSWGEGEDG 3162

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            + GHG+ +   +P    +L   ++  IA G  H+  IS +G +Y +G  ++G+LG G + 
Sbjct: 3163 KLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3222

Query: 380  AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
             +  PKL+    L  +R   V+CG+R   +  LTEDG V SWG   +G+LG G S     
Sbjct: 3223 TQLKPKLVTA--LHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSAT 3280

Query: 438  PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P  +  + G     I CG   +L L    ++
Sbjct: 3281 PHEIERLSGIGVIQIECGAQFSLALTRAGEV 3311



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 34/227 (14%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            ++GWG+   GQLG   GSRIK  PT    PC    A    RP+                 
Sbjct: 4201 IYGWGHNHRGQLGGLEGSRIK-TPT----PC---EALSLLRPI----------------- 4235

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--A 348
              ++A G +    VT  G L   G+G  G+ G G ++    P+   SL  + V+++A  +
Sbjct: 4236 --QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNS 4293

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G  H + ++ +G VY +G  + G+LG G   + + PKLLE   L       ++CG+ HSA
Sbjct: 4294 GGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEH--LNGMSVADIACGSAHSA 4351

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
             +T  G VL+WG  +YG+LG GDS D+  P LV  + G+   +IACG
Sbjct: 4352 AITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4398



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 116/255 (45%), Gaps = 41/255 (16%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
           GRH L +      + WG G   +LG G             C       K   L+ R    
Sbjct: 626 GRHFLAVDSNHNAYSWGVGDSRRLGHGD------------CHARELPTKIESLVRR---- 669

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
                     V+ + CG  +SA +T  G L T+G G YG+ GHG+++DQ  P+   +L D
Sbjct: 670 ----------VQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKD 719

Query: 341 IQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
            QV  +A  +G  HT+C++  G VY +G   +G+LG G   +   P L+E       R +
Sbjct: 720 HQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIEC----LPRVQ 775

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-----IPSLV-PIHGFLPRNIA 452
            V  G++ S  LT +GQ+ SWG  K   LG    ++RN     +P L+  +      ++A
Sbjct: 776 RVFAGSQFSLALTCEGQLYSWG--KASCLG-HQLVERNVQGCSVPRLITSLQHKRIVHVA 832

Query: 453 CGWWHTLLLAETTQI 467
            G  H L L+   +I
Sbjct: 833 VGVAHCLALSSNGEI 847



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 126/308 (40%), Gaps = 35/308 (11%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQA 165
            V   +G  HC+++T  GEVY WG  E        R         +   G   A +    A
Sbjct: 4289 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSA 4348

Query: 166  PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGRH 223
              +   A   V+   K    R        GD    L P LV    G +   +A  +G   
Sbjct: 4349 HSAAITASGHVLTWGKGRYGRL-----GHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQ 4403

Query: 224  TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
            TL ++D   VW WG G  G+LG G                  + G   P  +        
Sbjct: 4404 TLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKLPYKI-------E 4439

Query: 284  GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              AG   +K + CG + S  +T +GA+ T+G G + + GHGS +   RP   ++L   ++
Sbjct: 4440 SLAGLGVIK-VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4498

Query: 344  EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
              IA G  H V  S  G VY +G N  GQLG G   A   P+L+    L+ K    V+CG
Sbjct: 4499 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCG 4556

Query: 404  ARHSAVLT 411
            + H+  L+
Sbjct: 4557 SAHTLALS 4564



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 147/377 (38%), Gaps = 80/377 (21%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
             GG       S+ GK+   G   +     L  G     P P  LP     VVK  A   G
Sbjct: 3084 AGGSKSLFVVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 3140

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H +++T  G+V++WG                 G   K   G +S L        DK  
Sbjct: 3141 GKHALALTLDGKVFSWG----------------EGEDGKLGHGNRSTL--------DKPR 3176

Query: 173  GEEVVKRRKTSSAREESENPAS--------------------GDEFFTLSPCLVTLNPGV 212
              E ++ +K       S + A+                    GD    L P LVT   G 
Sbjct: 3177 LVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALHGR 3236

Query: 213  KITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
            ++ +VA G R   TL L++ G V+ WG G  G+LG G   +   TPH I  L        
Sbjct: 3237 RVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSATPHEIERL-------- 3287

Query: 271  RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                        SG      V +I CG + S  +T AG + T+G G Y + GHG      
Sbjct: 3288 ------------SGIG----VIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVR 3331

Query: 331  RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            +P   + L   +V  +A G  H + ++  G+VY +G N  GQ G+G       P L+   
Sbjct: 3332 KPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG- 3390

Query: 391  ILESKRAKVVSCGARHS 407
             L++     V+CG+ HS
Sbjct: 3391 -LDAVFVNRVACGSSHS 3406



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+++ ++  ++   IA G      +S +G+VY  G    G+LG GV    NVP   + P+
Sbjct: 3069 PTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPV 3126

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT DG+V SWG  + G+LG G+    + P LV  +     
Sbjct: 3127 LHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKI 3186

Query: 449  RNIACGWWHT 458
            R+IACG  H+
Sbjct: 3187 RDIACGSSHS 3196



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 37/221 (16%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           ++  V  G  ++  ++  G ++ WG G  G+LG G+       P ++  L      KD  
Sbjct: 669 RVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQC-MPAMVMAL------KDHQ 721

Query: 273 LL-VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           +L V  GS                 G  H+  +T  G +  +G G YG+ G+GS N  L+
Sbjct: 722 VLDVALGS-----------------GDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQ 764

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG-----GNQFGQLGTGVDQAENVPKL 386
           P     L   +V+++ AG   ++ ++ EG++Y +G     G+Q  +      Q  +VP+L
Sbjct: 765 PLLIECL--PRVQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVERNV---QGCSVPRL 819

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           + +  L+ KR   V+ G  H   L+ +G++  WG N   Q+
Sbjct: 820 ITS--LQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQI 858



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 24/233 (10%)

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPC---LEHAASGKDRPLLVRQGS-------------- 279
           G+  E  L   S     P P L+ C   L+  A  +D  +L+ Q                
Sbjct: 545 GFNVEPALSWTSAATQQPPPALLTCKFQLKQVACSEDMVVLLCQEGKLYNWPIAKPETEP 604

Query: 280 --VNSSGKAGRSYVKEIA-CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
             ++ +  A  ++V   A C GRH   V       ++G G   + GHG  + +  P+   
Sbjct: 605 QLLDFAEIANETFVSIAAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIE 664

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
           SL+  +V+ +  G  ++  I++ G +Y +G   +G+LG G    + +P ++         
Sbjct: 665 SLVR-RVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVL 723

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              +  G  H+  LT  G V +WG   YG+LG G       P L+     LPR
Sbjct: 724 DVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIEC---LPR 773



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 78/222 (35%), Gaps = 66/222 (29%)

Query: 46   LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
            L G  +    CG G    L  ++   + +WG  D     Y   G+ G      P   E+ 
Sbjct: 4387 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4441

Query: 105  ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
                V+K   G    V++T++G VYTWG            DF   G    D         
Sbjct: 4442 AGLGVIKVECGSQFSVALTKSGAVYTWG----------KGDFHRLGHGSVDH-------- 4483

Query: 162  TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
                           V+R K  +A +                       G KI  +A G 
Sbjct: 4484 ---------------VRRPKKVAALQ-----------------------GKKIISIATGS 4505

Query: 222  RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             H +  SD G+V+ WG   EGQLG G+ +  +  P L+  L+
Sbjct: 4506 LHCVACSDAGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4546



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
            G  F+LA +  G+L +WG A   G   +     G   P          +V  A G AHC
Sbjct: 779 AGSQFSLALTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHC 838

Query: 117 VSVTEAGEVYTWG 129
           ++++  GE++ WG
Sbjct: 839 LALSSNGEIFGWG 851


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 124/248 (50%), Gaps = 26/248 (10%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            + + ++G +H+ +L+D GQV+ WG   + QLG G               +  ++    P
Sbjct: 95  NVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRG---------------QVDSASTSIP 139

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +VR       G A    V ++ACG  H+  +T  G + T+G   +GQ G  +   Q  P
Sbjct: 140 RMVR-------GLADHKVV-QVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEP 191

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
            + S +  + + ++AAG  H + +++ G ++ +G N FGQLG G DQ    P L++T  L
Sbjct: 192 QWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKT--L 249

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            ++    ++CG  HS  LT DG V ++G   YGQLG   S +  +P  +  + G     I
Sbjct: 250 RNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKVFELMGSSVTQI 309

Query: 452 ACGWWHTL 459
           ACG  H++
Sbjct: 310 ACGRKHSI 317



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 164/362 (45%), Gaps = 46/362 (12%)

Query: 54  DVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           +V    CG    L   + G++++ G+ +D GQ  L   K  + P       E +V++A++
Sbjct: 45  EVVHIACGLQHTLFVKKDGRVLSCGN-NDYGQ--LGHEKPCKRPALIDSLGERNVLQASS 101

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
           G  H   +T+AG+V+TWG  E     +   D  S  S  +   G       + A  S   
Sbjct: 102 GTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSAST-SIPRMVRGLADHKVVQVACGSAHT 160

Query: 172 AGEEVVKRRKTSSAREESE----NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
            G     +  T  +    +    N    +E     P  V+   G+ I +VAAG  H L+L
Sbjct: 161 VGLTATGQIYTWGSNNHGQLGLANKTPQNE-----PQWVSCISGLPIVRVAAGADHNLVL 215

Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGK 285
           +  G ++ WG    GQLG+G                     +DR  P LV+  ++ + G 
Sbjct: 216 TISGALFAWGCNSFGQLGVGD-------------------DQDRGAPTLVK--TLRNQG- 253

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
                +  +ACG  HS  +T  G + TFG G+YGQ GH ++N++L P     LM   V Q
Sbjct: 254 -----ICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKVFELMGSSVTQ 308

Query: 346 IAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           IA G  H++  +   GRVYVFG    GQLGTG       P +++ P + +  A+VV  GA
Sbjct: 309 IACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMVKGPFV-AFGAEVVDKGA 367

Query: 405 RH 406
            H
Sbjct: 368 IH 369



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 7/174 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  IACG +H+  V   G +L+ G   YGQ GH       RP+   SL +  V Q ++G 
Sbjct: 46  VVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCK--RPALIDSLGERNVLQASSGT 103

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTG-VDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
            H+  ++  G+V+ +G N+  QLG G VD A  ++P+++    L   +   V+CG+ H+ 
Sbjct: 104 KHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRG--LADHKVVQVACGSAHTV 161

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
            LT  GQ+ +WG N +GQLGL +   +N P  V  I G     +A G  H L+L
Sbjct: 162 GLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVL 215



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 9/164 (5%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           ++L +G   +GQ G G   ++    P    S  +++V  IA GL HT+ +  +GRV   G
Sbjct: 10  SVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCG 69

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N +GQLG   ++    P L+++  L  +     S G +HS VLT+ GQV +WG N+  Q
Sbjct: 70  NNDYGQLGH--EKPCKRPALIDS--LGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQ 125

Query: 427 LGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           LG G  DS   +IP +V  +       +ACG  HT+ L  T QI
Sbjct: 126 LGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQI 169


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 86  GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC               Q S N S K     V E+ACG  HS V+T  G +  
Sbjct: 141 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 181 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 240

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 241 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 299 KSNQSYPTPVTV 310



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 145 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 204 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 239

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 240 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 299

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 300 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 99/172 (57%), Gaps = 3/172 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAAGLWHTVCI 356
           G H  + T  G + T+G   Y Q G+G+TN  L P   +++L + QV ++A G +H++ +
Sbjct: 113 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 172

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG      + + G+V
Sbjct: 173 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMCCMAVVDTGEV 231

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  Q+
Sbjct: 232 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 283



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 122/314 (38%), Gaps = 88/314 (28%)

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
           G G    LAT+E G++ TWG       S L +G       P  + T  S   V++ A G 
Sbjct: 111 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGS 166

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
            H + +T  GEV+ WG+                     +++G+  +  T   P       
Sbjct: 167 YHSLVLTSDGEVFAWGY---------------------NNSGQVGSGSTVNQP------- 198

Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
              + RR T   + +                         +  +A G    + + D G+V
Sbjct: 199 ---IPRRVTGCLQNKV------------------------VVTIACGQMCCMAVVDTGEV 231

Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
           + WGY G GQLGLGS     PT    PC   A  G      +R              V+ 
Sbjct: 232 YVWGYNGNGQLGLGSSGNQ-PT----PCRVAALQG------IR--------------VQR 266

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +   D  +E  A    HT
Sbjct: 267 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHT 326

Query: 354 VCISVE-GRVYVFG 366
                + G VY++G
Sbjct: 327 SAAKTQGGHVYMWG 340



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 159/406 (39%), Gaps = 87/406 (21%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  + GKL TWG        +    K    P         ++V+AA G  HC++V + 
Sbjct: 50  SLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQ 109

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSF--QKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
           G  Y WG  E          +G  G    +KD TG+    P  +     +R   ++V R 
Sbjct: 110 GRAYAWGGNE----------YGQCGEEPERKDDTGR----PLRRDIVIPQRCASKLVVR- 154

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
                                              +VAAGG H+++L+  G VW WG   
Sbjct: 155 -----------------------------------QVAAGGTHSVVLTREGHVWSWG--- 176

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
             Q      IK +  P  +  LE                           V+ IA G  H
Sbjct: 177 --QPWPPGDIKQISVPVRVQGLER--------------------------VRLIAVGAFH 208

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           +  + + G L  +G   YGQ G G T  + +P     L  + +  IAAG WH+  ++ +G
Sbjct: 209 NLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDG 268

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            VY +G  + G+LG G +   +        +L  +    VSCG  HS  LT DG++ ++G
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFG 328

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA----CGWWHTLLLA 462
              +G+LG G  +    P  VPI    P+N+      G W   L+A
Sbjct: 329 RGDHGRLGYGRKVTTGQPMEVPIDIPPPKNLTDSGDAGRWIAKLVA 374



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 123/273 (45%), Gaps = 41/273 (15%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           C+V      K+  V AG R++L + D G+++ WG+   G LG     K    P  +  L 
Sbjct: 30  CIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKAL- 88

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
                          +VN         + + A GG H   V D G    +G   YGQCG 
Sbjct: 89  --------------ANVN---------IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 324 --GSTNDQLRPSYASSLM------DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
                +D  RP     ++       + V Q+AAG  H+V ++ EG V+ +G         
Sbjct: 126 EPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWG----QPWPP 181

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G  +  +VP  ++      +R ++++ GA H+  L EDG + +WG N+YGQLG GD+  R
Sbjct: 182 GDIKQISVPVRVQG----LERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPR 237

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           + P  V  + G    +IA G WH+  L +  ++
Sbjct: 238 SQPITVQGLSGLTLVDIAAGGWHSTALTDDGEV 270



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 8/112 (7%)

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++ E  V  +G  + GQLG G ++ +    +++   LE  + + V  G+R+S  + +DG+
Sbjct: 1   MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKA--LEPYKVRSVVAGSRNSLAICDDGK 58

Query: 416 VLSWGWNKYGQLGL-GDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLLLAE 463
           + +WGWN+ G LG   ++   NIPS V        NI   A G WH L + +
Sbjct: 59  LFTWGWNQRGTLGHPPETKTENIPSQV--KALANVNIVQAAIGGWHCLAVDD 108



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 12/111 (10%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           D+   + P  V L  G  I +V+ GG H++ L+  G+++ +G G  G+LG G ++     
Sbjct: 287 DKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKV-TTGQ 345

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
           P  +P         D P      ++  SG AGR   K +A GGRH+  + +
Sbjct: 346 PMEVPI--------DIP---PPKNLTDSGDAGRWIAKLVASGGRHTLAIVE 385


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 126/269 (46%), Gaps = 30/269 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G +  T  P L+       I +++ G RH+L LSD GQV  WG    GQLG  +  ++V 
Sbjct: 73  GHDLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQ 132

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P ++           R L+ +              V +IACG  HS  +T  G L ++G
Sbjct: 133 LPKVV-----------RQLVSKT-------------VVQIACGNNHSLALTSCGELYSWG 168

Query: 315 WGLYGQCGHGSTNDQLRPSY---ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
             +YGQ G  S ND    +Y    ++L+ I +  IA G  H+  IS  G V+ +G N  G
Sbjct: 169 SNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCG 228

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG   +     P  L+T  L +   +  +CG   S  LT +G V + G   YGQLG G 
Sbjct: 229 QLGLNDETNRAYPTQLKT--LRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF 286

Query: 432 SIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
           S +  +P +V  + G     +ACG  HTL
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTL 315



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 109/239 (45%), Gaps = 34/239 (14%)

Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           +++ WG    GQLGLG    + + TP  IP     A                        
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTA------------------------ 41

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++++CG RH+  +T  G +   G   Y Q GH       RP     L D  + QI+ G 
Sbjct: 42  VQQVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPQLIPELQDYVIIQISCGS 99

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+V  +G N  GQLG   + +   +PK++    L SK    ++CG  HS  
Sbjct: 100 RHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQ--LVSKTVVQIACGNNHSLA 157

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR---NIP-SLVPIHGFLPRNIACGWWHTLLLAET 464
           LT  G++ SWG N YGQLG+    D    N P  L  + G     IACG  H+ L++++
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 139/339 (41%), Gaps = 51/339 (15%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
           L  + +GK+   GS D    S L      + P+  P   +  +++ + G  H +++++ G
Sbjct: 53  LFLTATGKVYACGSND---YSQLGHDLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWG 109

Query: 124 EVYTWGWREC-----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           +V +WG  +C           V   KV R   S    Q       S   T          
Sbjct: 110 QVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYS--W 167

Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
           G  +  +   +S  + +             P  +T   G+ +  +A GG H+ ++S  G 
Sbjct: 168 GSNIYGQLGVNSPNDLTHCNY---------PLRLTTLLGIPLAAIACGGNHSFLISKSGA 218

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V+GWG    GQLGL                       +R    +  ++ + G      V+
Sbjct: 219 VFGWGRNNCGQLGLNDE-------------------TNRAYPTQLKTLRTLG------VR 253

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
             ACG   S  +T+ G + T G G YGQ GHG +++++ P     LM   + Q+A G  H
Sbjct: 254 FAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRH 313

Query: 353 TVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
           T+  +   G+VY FG    GQLGT   ++  +P+++  P
Sbjct: 314 TLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +Y +G    GQLG G  + E +    + P       + VSCG RH+  LT  G+V + G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGS 66

Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           N Y QLG      R  P L+P +  ++   I+CG  H+L L++  Q+
Sbjct: 67  NDYSQLGHDLPTKR--PQLIPELQDYVIIQISCGSRHSLALSDWGQV 111



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 106/282 (37%), Gaps = 41/282 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   +LA S+ G++++WG  D     + T  +  + P+        +VV+ A G  H ++
Sbjct: 98  GSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA--GEEV 176
           +T  GE+Y+WG       + +    G               L T    P    A  G   
Sbjct: 158 LTSCGELYSWG-------SNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHS 210

Query: 177 VKRRKTSSA----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
               K+ +     R         DE     P  +     + +   A G   ++ L++ G 
Sbjct: 211 FLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGG 270

Query: 233 VWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           V+  G G  GQLG G S  +M+P                R ++   GS           +
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLP----------------RMVMELMGST----------I 304

Query: 292 KEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            ++ACG RH+ A V   G +  FG G  GQ G  ST   + P
Sbjct: 305 TQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLP 346


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 115/251 (45%), Gaps = 28/251 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI           
Sbjct: 83  GQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIK---------- 132

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQ 329
                         K  +  + +++CG  H   +   G   T+G   YGQ G G     Q
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQ 178

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
             P    SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P     
Sbjct: 179 ASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESP--CHV 236

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLP 448
            +L S++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G   
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 449 RNIACGWWHTL 459
             IACG  HTL
Sbjct: 297 SQIACGRHHTL 307



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 139/322 (43%), Gaps = 85/322 (26%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAH 115
            CG   +LA S+ G+L +WG+  D GQ  LT+ +   T P       + ++++ + G  H
Sbjct: 90  ACGESHSLALSDQGQLFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH 148

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
           C+++   G+ +TWG             +G  G       GK+   P++ +P         
Sbjct: 149 CLALAADGQFFTWG----------QNSYGQLG------LGKEC--PSQASP--------- 181

Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
             +R K+                            G+ + +VAAGG H+  LS  G V+G
Sbjct: 182 --QRVKSLD--------------------------GIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG    GQLGL                      ++ P  V+   +  S K     V  I+
Sbjct: 214 WGKNSSGQLGLSDE-----------------RDRESPCHVK---LLRSQK-----VVYIS 248

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CG  H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+ 
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLA 308

Query: 356 -ISVEGRVYVFGGNQFGQLGTG 376
            +   G +Y FG    GQLGTG
Sbjct: 309 FVPSSGMIYAFGCGTRGQLGTG 330



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 40/263 (15%)

Query: 236 WGYGGEGQLGLGSRIK-MVPTPHLIPCL------EHAASGKDRPLLVRQGSV-----NSS 283
           WGY   GQ G+GS I+ +VP P +   +      E A  G     L+  G V     N+ 
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 284 GKAGRS---------------YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
           G+ G                 ++  +ACG  HS  ++D G L ++G G  GQ G  +  D
Sbjct: 64  GQLGHDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIED 123

Query: 329 QLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKL 386
            +  P     L    + Q++ G WH + ++ +G+ + +G N +GQLG G +  ++  P+ 
Sbjct: 124 AVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQR 183

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
           +++  L+      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  
Sbjct: 184 VKS--LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE----SPCHVK 237

Query: 447 LPRN-----IACGWWHTLLLAET 464
           L R+     I+CG  HT +L ++
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKS 260



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 12/164 (7%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G+  +GQ G GS    +   P     + D  V+++A G  H+V +  +G VY  G 
Sbjct: 1   MLCWGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 368 NQFGQLGTGVD--QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           N  GQLG   +  + E +  L    I+       V+CG  HS  L++ GQ+ SWG    G
Sbjct: 61  NTKGQLGHDCEGSKPEQIGALAGQHIVH------VACGESHSLALSDQGQLFSWGAGSDG 114

Query: 426 QLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           QLGL    D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 174/402 (43%), Gaps = 50/402 (12%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA-HCVSVTE 121
           +L     G + TWGS +  GQ  L  G   +   P  +   + VV  AAG   H V+V  
Sbjct: 310 SLVLKSDGTVWTWGS-NQRGQ--LGDGTQEQRLVPVQVMGLSGVVAVAAGSGQHSVAVMA 366

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
            GEV+TWG         V    G  GS    +  K+S    E+   +  R      K   
Sbjct: 367 NGEVWTWG-------HNVEGQLGE-GSSSYSAVPKRSHALVERTSVAAGRYHGLASKPDG 418

Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGG 240
           T  A  ++     GD   T    L T  PG+  +  VAAG   +L L   G VW WG   
Sbjct: 419 TVWAWGDNAKGQLGDGT-TAQRLLPTQVPGLTNMVAVAAGHHSSLALKADGTVWAWGDNA 477

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
            GQLG GS       P  +P L                          + V  IA G  H
Sbjct: 478 NGQLGNGSTTDR-SNPTQVPGL--------------------------TGVVSIAAGPGH 510

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           +  V   G L T+G    GQ G G+T D+  P+    +    V  +AAGL+H++ + V+G
Sbjct: 511 ALAVKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPGVTG--VVSVAAGLYHSLVVKVDG 568

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            V+ +G N  GQLG G      VP   +TP L    A  ++ G  HS  L  DG V +WG
Sbjct: 569 TVWAWGSNYEGQLGGGTTTIRPVPS--QTPNLTGVVA--ITAGLYHSLALKTDGTVWAWG 624

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFL-PRNIACGWWHTLLL 461
           +N +GQLG G++  + +P+ VP  GF    ++  G +H+L +
Sbjct: 625 YNLHGQLGNGNTTTQQVPTQVP--GFSGGVSLGAGIYHSLAI 664



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 179/434 (41%), Gaps = 60/434 (13%)

Query: 42  IPARLCGGDSWK-DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           +P R  G   W     G G   +LA    G + TWG  ++ GQ  L  G       P  +
Sbjct: 90  VPVRAWG--LWNISAVGAGDLHSLAMKSDGTVWTWG-GNNFGQ--LGDGTTTGRQAPVQV 144

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
           P    VV+ AAG++H +++   G V+ WG       +      G   + Q+    +   L
Sbjct: 145 PGLGEVVRVAAGFSHSLALKTDGTVWAWG-------SNGAGRLGDGTTTQRLMPVQVQGL 197

Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF--FTLSPCLVTLNPGV-KITKV 217
           PT +A  +   A    +       A   + N   GD    + + P LV   PG+   T +
Sbjct: 198 PTIKAIAAGN-AHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALV---PGLTNATGL 253

Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL---- 273
           +AG  H+L+    G  W WG    GQLG G+      T    P      +G D  L    
Sbjct: 254 SAGSNHSLVRQADGTTWVWGANTYGQLGDGT-----TTSRSAPQQVSGLAGVDGVLGAEL 308

Query: 274 ----LVRQGSV-----NSSGK---------------AGRSYVKEIACG-GRHSAVVTDAG 308
               L   G+V     N  G+                G S V  +A G G+HS  V   G
Sbjct: 309 HSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMGLSGVVAVAAGSGQHSVAVMANG 368

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            + T+G  + GQ G GS++    P  + +L  ++   +AAG +H +    +G V+ +G N
Sbjct: 369 EVWTWGHNVEGQLGEGSSSYSAVPKRSHAL--VERTSVAAGRYHGLASKPDGTVWAWGDN 426

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             GQLG G        +LL T +        V+ G   S  L  DG V +WG N  GQLG
Sbjct: 427 AKGQLGDGT----TAQRLLPTQVPGLTNMVAVAAGHHSSLALKADGTVWAWGDNANGQLG 482

Query: 429 LGDSIDRNIPSLVP 442
            G + DR+ P+ VP
Sbjct: 483 NGSTTDRSNPTQVP 496



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 182/457 (39%), Gaps = 63/457 (13%)

Query: 19   ETVVYMWGY-LPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKLIT 74
            +  V+ WGY L G     +     +P ++    GG S     G G   +LA    G + T
Sbjct: 617  DGTVWAWGYNLHGQLGNGNTTTQQVPTQVPGFSGGVS----LGAGIYHSLAIKTDGSVWT 672

Query: 75   WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
            WG  +  GQ  L  G       P  +     V   AAG  H V++   G  + WG     
Sbjct: 673  WGY-NYRGQ--LGDGTTTSRTTPTQVAGFTGVSFLAAGEFHSVALRTDGTAWAWG----- 724

Query: 135  PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK--RAGEEVVKRRKTSS-----ARE 187
                 + D G  G    D + +    PT       +   AG+     RK+          
Sbjct: 725  -----SNDKGQLG----DGSARWHYAPTLSRLVGARGLAAGDRFTAARKSDGTVWAWGDN 775

Query: 188  ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
                   G    T SP  V+    V+   +AAG  H +++   G VW WG   +GQLG G
Sbjct: 776  TYGQLGDGTTLATRSPAQVSGLTDVE--GLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDG 833

Query: 248  SRIK-MVPT--PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGR----------- 288
            +  + +VPT  P L   +  AA       L   G+V     N  G+ G            
Sbjct: 834  TTTRRLVPTQVPGLTGVVAVAAGYAHSLALKADGTVWGWGENIYGQLGDGTTTQRVAPTQ 893

Query: 289  ----SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                + V  +A G  H       G L  +G+  +GQ G G+T  +L P+   SL    V 
Sbjct: 894  AQGLTVVLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTLVPSLSG--VV 951

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             ++A   H++ +  +G V+ +G N  GQLG G     +VP   + P L S   K VS G 
Sbjct: 952  SLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTTTRHVPT--QAPSLSS--VKAVSAGF 1007

Query: 405  RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
             +S  +  DG V SWG N  GQLG G +  R  P+ V
Sbjct: 1008 EYSLAVKADGTVWSWGINDRGQLGSGTATPRATPTQV 1044



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 176/436 (40%), Gaps = 50/436 (11%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
           + + +  PIP ++ G      V  G    +L     G +  WGS + EGQ  L  G    
Sbjct: 533 DGTTVDRPIPTQVPGVTGVVSVAAG-LYHSLVVKVDGTVWAWGS-NYEGQ--LGGGTTTI 588

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
            P P   P    VV   AG  H +++   G V+ WG+             G  G+    +
Sbjct: 589 RPVPSQTPNLTGVVAITAGLYHSLALKTDGTVWAWGYNL----------HGQLGNGNTTT 638

Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPG 211
               + +P      S        +  +   S      N     GD   T       +   
Sbjct: 639 QQVPTQVPGFSGGVSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGF 698

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKD 270
             ++ +AAG  H++ L   G  W WG   +GQLG GS R    PT   +      A+G D
Sbjct: 699 TGVSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGSARWHYAPTLSRLVGARGLAAG-D 757

Query: 271 RPLLVRQ--GSV-----NSSGK---------------AGRSYVKEIACGGRHSAVVTDAG 308
           R    R+  G+V     N+ G+               +G + V+ +A G  H  VV   G
Sbjct: 758 RFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPAQVSGLTDVEGLAAGEGHVVVVKMDG 817

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            + T+G    GQ G G+T  +L P+    L    V  +AAG  H++ +  +G V+ +G N
Sbjct: 818 TVWTWGNNAKGQLGDGTTTRRLVPTQVPGLTG--VVAVAAGYAHSLALKADGTVWGWGEN 875

Query: 369 QFGQLGTGVDQAENVPKLLE--TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            +GQLG G       P   +  T +L       ++ G  H      DG + +WG+N +GQ
Sbjct: 876 IYGQLGDGTTTQRVAPTQAQGLTVVLS------MASGTYHGLARKADGTLWAWGYNAHGQ 929

Query: 427 LGLGDSIDRNIPSLVP 442
           LG+G +  R  P+LVP
Sbjct: 930 LGIGTTTTRLAPTLVP 945



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 32/275 (11%)

Query: 210 PGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP-HLIPCLEHAA 266
           PG+ ++ +VAAG  H+L L   G VW WG  G G+LG G+   +++P     +P ++  A
Sbjct: 145 PGLGEVVRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIKAIA 204

Query: 267 SGKDRPL-LVRQGSV-----NSSGKAGRSY---------------VKEIACGGRHSAVVT 305
           +G    L L   G V     NS+G+ G +                   ++ G  HS V  
Sbjct: 205 AGNAHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQ 264

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
             G    +G   YGQ G G+T  +  P   S L    V+ +     H++ +  +G V+ +
Sbjct: 265 ADGTTWVWGANTYGQLGDGTTTSRSAPQQVSGLAG--VDGVLGAELHSLVLKSDGTVWTW 322

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G NQ GQLG G  +   VP  +   +  S    V +   +HS  +  +G+V +WG N  G
Sbjct: 323 GSNQRGQLGDGTQEQRLVPVQV---MGLSGVVAVAAGSGQHSVAVMANGEVWTWGHNVEG 379

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPR-NIACGWWHTL 459
           QLG G S    +P     H  + R ++A G +H L
Sbjct: 380 QLGEGSSSYSAVPKRS--HALVERTSVAAGRYHGL 412



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 169/438 (38%), Gaps = 56/438 (12%)

Query: 22  VYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
           V+ WG+ + G   E S   S +P R         V  G     LA+   G +  WG   D
Sbjct: 370 VWTWGHNVEGQLGEGSSSYSAVPKRSHALVERTSVAAGRY-HGLASKPDGTVWAWG---D 425

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
             +  L  G   +   P  +P   ++V  AAG    +++   G V+ WG           
Sbjct: 426 NAKGQLGDGTTAQRLLPTQVPGLTNMVAVAAGHHSSLALKADGTVWAWG-------DNAN 478

Query: 141 RDFGSAGSFQKDSTGKQSALP---TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
              G+  +  + +  +   L    +  A P    A    VK   T     ++     GD 
Sbjct: 479 GQLGNGSTTDRSNPTQVPGLTGVVSIAAGPGHALA----VKADGTLWTWGDNNTGQLGDG 534

Query: 198 FFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
                P + T  PGV  +  VAAG  H+L++   G VW WG   EGQLG G    + P P
Sbjct: 535 TTVDRP-IPTQVPGVTGVVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLG-GGTTTIRPVP 592

Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
              P L                          + V  I  G  HS  +   G +  +G+ 
Sbjct: 593 SQTPNL--------------------------TGVVAITAGLYHSLALKTDGTVWAWGYN 626

Query: 317 LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           L+GQ G+G+T  Q  P+            + AG++H++ I  +G V+ +G N  GQLG G
Sbjct: 627 LHGQLGNGNTTTQQVPTQVPGFSG--GVSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDG 684

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
              +        T +        ++ G  HS  L  DG   +WG N  GQLG G +    
Sbjct: 685 TTTSRTT----PTQVAGFTGVSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGSARWHY 740

Query: 437 IPSLVPIHGFLPRNIACG 454
            P+L  + G   R +A G
Sbjct: 741 APTLSRLVG--ARGLAAG 756



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 122/290 (42%), Gaps = 41/290 (14%)

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF------TLSPCLVTLNP-GV 212
           L T +A  +  R G     R  T + R +    A GD  +      +L    V +   G+
Sbjct: 38  LATAKAAETASRLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGL 97

Query: 213 -KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
             I+ V AG  H+L +   G VW WG    GQLG G+                  +G+  
Sbjct: 98  WNISAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGT-----------------TTGRQA 140

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P+ V           G   V  +A G  HS  +   G +  +G    G+ G G+T  +L 
Sbjct: 141 PVQV----------PGLGEVVRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLM 190

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P     L  I+   IAAG  H++ +   GRV+ +G N  GQLG        +P L+  P 
Sbjct: 191 PVQVQGLPTIKA--IAAGNAHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALV--PG 246

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           L +  A  +S G+ HS V   DG    WG N YGQLG G +  R+ P  V
Sbjct: 247 LTN--ATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSRSAPQQV 294



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 108/251 (43%), Gaps = 37/251 (14%)

Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
           P+S DE  T          G+    VAAG  HTL +   G VW WG    GQLG GS   
Sbjct: 32  PSSPDELATAKAAETASRLGL----VAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSL-- 85

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
                            +D+ + VR          G   +  +  G  HS  +   G + 
Sbjct: 86  -----------------QDQRVPVR--------AWGLWNISAVGAGDLHSLAMKSDGTVW 120

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           T+G   +GQ G G+T  +  P     L   +V ++AAG  H++ +  +G V+ +G N  G
Sbjct: 121 TWGGNNFGQLGDGTTTGRQAPVQVPGLG--EVVRVAAGFSHSLALKTDGTVWAWGSNGAG 178

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           +LG G        +L+   +      K ++ G  HS  L   G+V +WG N  GQLG   
Sbjct: 179 RLGDGT----TTQRLMPVQVQGLPTIKAIAAGNAHSLALDGTGRVWAWGSNSNGQLGDTT 234

Query: 432 SIDRNIPSLVP 442
           +  R +P+LVP
Sbjct: 235 AGYRMLPALVP 245



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 170/427 (39%), Gaps = 100/427 (23%)

Query: 18   KETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCG--GGCGFALATSESGKLIT 74
             +  V+ WG    G   + + + +  PA++ G     DV G   G G  +     G + T
Sbjct: 765  SDGTVWAWGDNTYGQLGDGTTLATRSPAQVSG---LTDVEGLAAGEGHVVVVKMDGTVWT 821

Query: 75   WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
            WG+ + +GQ  L  G       P  +P    VV  AAG+AH +++   G V  WGW E +
Sbjct: 822  WGN-NAKGQ--LGDGTTTRRLVPTQVPGLTGVVAVAAGYAHSLALKADGTV--WGWGENI 876

Query: 135  PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
                    +G  G    D T  Q   PT+                               
Sbjct: 877  --------YGQLG----DGTTTQRVAPTQA------------------------------ 894

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
              +  T+            +  +A+G  H L     G +W WGY   GQLG+G+    + 
Sbjct: 895  --QGLTV------------VLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLA 940

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
             P L+P L                          S V  ++   +HS  +   G +  +G
Sbjct: 941  -PTLVPSL--------------------------SGVVSLSATHQHSLALKPDGTVWAWG 973

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            +   GQ G G+T  +  P+ A SL    V+ ++AG  +++ +  +G V+ +G N  GQLG
Sbjct: 974  YNSNGQLGDGTTTTRHVPTQAPSLSS--VKAVSAGFEYSLAVKADGTVWSWGINDRGQLG 1031

Query: 375  TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            +G       P+   T +       ++     H+ V++ DG +  +G N+ GQLG GD++ 
Sbjct: 1032 SGT----ATPRATPTQVAGLNSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDTLI 1087

Query: 435  RNIPSLV 441
            R  P+ V
Sbjct: 1088 RLAPNQV 1094



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 7/163 (4%)

Query: 300 HSAVVTDAGALLTFGWGLYG-QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
           H+ + + A  LL     + G Q G  S+ D+L  + A+     ++  +AAG  HT+ +  
Sbjct: 7   HTRIASKAVGLLFMLLAVSGCQDGGPSSPDELATAKAAETAS-RLGLVAAGRHHTLAVRS 65

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           +G V+ +G N +GQLG G  Q + VP  +    L +  A  V  G  HS  +  DG V +
Sbjct: 66  DGTVWAWGDNAYGQLGNGSLQDQRVP--VRAWGLWNISA--VGAGDLHSLAMKSDGTVWT 121

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
           WG N +GQLG G +  R  P  VP  G + R +A G+ H+L L
Sbjct: 122 WGGNNFGQLGDGTTTGRQAPVQVPGLGEVVR-VAAGFSHSLAL 163


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 115/248 (46%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G   YGQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 159/377 (42%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHVREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         AS  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALASDGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G YGQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HVREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGV--DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            N  GQLG     ++ E +  L +  I+       V+CG  HS  L++ GQ+ SWG    
Sbjct: 60  LNTKGQLGHVREGNKPEQIGALADQHIIH------VACGESHSLALSDRGQLFSWGAGSD 113

Query: 425 GQLGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           GQLGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQF 158


>gi|281203960|gb|EFA78156.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 614

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 9/230 (3%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ I  ++ G RH+  +S    ++ WG    GQLGL +    +  P  +  ++      D
Sbjct: 322 GIAIKSISCGMRHSTAVSSELDLFVWGCNKFGQLGLDANQDQIDIPTKLKIIQFTQQDSD 381

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
             LL  Q +   +  +G   + ++ACG +H+ V++    L +FG   +GQ G G T D+ 
Sbjct: 382 STLLEAQAT-KQTRSSGICSIAKVACGAKHTLVMSSDNQLYSFGSNKFGQLGLGDTQDRF 440

Query: 331 RPSYASSLMDIQVEQ---IAAGLWHTVCI--SVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
           +P+  +S  +I +++   I  G W   C+   V+G +Y+ G   +GQLG G  Q E    
Sbjct: 441 KPTLVNSNNNILIDKEFNIQCG-WSNSCLFNKVDGILYLCGRGDYGQLGNGKFQVEPQTS 499

Query: 386 L--LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
              L++   +  R    S G+ H  VLTED  + S+GWN++ QLGL + +
Sbjct: 500 FLPLQSHPFDKSRILDYSIGSEHLLVLTEDLSLYSFGWNEHFQLGLCEDV 549



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 26/164 (15%)

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLL- 387
           L P     L  I ++ I+ G+ H+  +S E  ++V+G N+FGQLG   +Q + ++P  L 
Sbjct: 312 LIPRVIEHLRGIAIKSISCGMRHSTAVSSELDLFVWGCNKFGQLGLDANQDQIDIPTKLK 371

Query: 388 ---------ETPILESKRAKV-----------VSCGARHSAVLTEDGQVLSWGWNKYGQL 427
                    ++ +LE++  K            V+CGA+H+ V++ D Q+ S+G NK+GQL
Sbjct: 372 IIQFTQQDSDSTLLEAQATKQTRSSGICSIAKVACGAKHTLVMSSDNQLYSFGSNKFGQL 431

Query: 428 GLGDSIDRNIPSLVPIHGFL----PRNIACGWWHTLLLAETTQI 467
           GLGD+ DR  P+LV  +  +      NI CGW ++ L  +   I
Sbjct: 432 GLGDTQDRFKPTLVNSNNNILIDKEFNIQCGWSNSCLFNKVDGI 475



 Score = 38.5 bits (88), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 14/82 (17%)

Query: 361 RVYVFGGNQFGQLGTGVDQAEN--VPKLLETPILESKRA----------KVVSCGA--RH 406
           ++YV GGN  GQLGTG+    N   P  L  PI    R+          KV+   A   H
Sbjct: 135 QLYVCGGNDCGQLGTGLSNNINTLTPLDLLPPIANISRSGSNSSSNSDHKVLEAAAGWNH 194

Query: 407 SAVLTEDGQVLSWGWNKYGQLG 428
           + +L  +G V S+G N + QLG
Sbjct: 195 TLILDSNGLVYSFGSNNHSQLG 216


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 123/259 (47%), Gaps = 41/259 (15%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V L   +KI  V  G  H LILS  G+ + + Y                       +
Sbjct: 100 PACVKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYS----------------------I 137

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           EHA        ++++ S+            +IACG  HS  ++  G L  +G  L+GQ G
Sbjct: 138 EHARF----QCILQEKSI-----------IQIACGDYHSLALSKGGELFAWGQNLHGQLG 182

Query: 323 HGSTNDQL-RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G     +  P     L  + + QI+AG  H++ +S+ G VY +G N  GQLG G    E
Sbjct: 183 VGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGE 242

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           + P L+ET  L++++ + ++CG  H+A+LT DG V ++G  KYGQLG   + +   P LV
Sbjct: 243 DFPSLIET--LDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLV 300

Query: 442 -PIHGFLPRNIACGWWHTL 459
             + G     IACG  HTL
Sbjct: 301 TELAGNRVTQIACGRRHTL 319



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 122/256 (47%), Gaps = 33/256 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP----HL--IPCLEHAAS 267
           I ++A G  H+L LS  G+++ WG    GQLG+G     +PTP    HL  +P ++ +A 
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 210

Query: 268 GKDRPLLVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVVT 305
                 L   G+V     N  G+ G  +                 V+ +ACGG H+A++T
Sbjct: 211 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT 270

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYV 364
             G + TFG G YGQ GH ST ++LRP   + L   +V QIA G  HT+  +S  G+V+ 
Sbjct: 271 TDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFS 330

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           FG  + GQLG G    + +P  ++ P  E  + +  +       +   +  VL W   K 
Sbjct: 331 FGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGNQSVLLWMEKKN 390

Query: 425 GQLGLGDSIDRNIPSL 440
             + L     R IP+L
Sbjct: 391 PYVNL----RRKIPTL 402



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 115/286 (40%), Gaps = 90/286 (31%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVV 107
           K +    CG   +LA S+ G+L  WG  +  GQ  L  G+      TP+     +   +V
Sbjct: 149 KSIIQIACGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRLFASIPTPQAVEHLSGVPLV 205

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
           + +AG AH ++++ +G VY+WG            D G  G    D               
Sbjct: 206 QISAGKAHSMALSMSGNVYSWG----------RNDLGQLGLGHTD--------------- 240

Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
                                      G++F    P L+      ++  +A GG HT +L
Sbjct: 241 ---------------------------GEDF----PSLIETLDNQQVEFLACGGSHTALL 269

Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
           +  G V+ +G G  GQLG                  ++   + RP LV + + N      
Sbjct: 270 TTDGLVFTFGAGKYGQLG-----------------HNSTQNELRPRLVTELAGNR----- 307

Query: 288 RSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
              V +IACG RH+ A V+D G + +FG G  GQ G+G T++QL P
Sbjct: 308 ---VTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 350



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 12/134 (8%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-----VDQAENVPKLLE 388
           +   L +  + QIA G +H++ +S  G ++ +G N  GQLG G     +   + V  L  
Sbjct: 142 FQCILQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSG 201

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
            P+++      +S G  HS  L+  G V SWG N  GQLGLG +   + PSL+  +    
Sbjct: 202 VPLVQ------ISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQ 255

Query: 448 PRNIACGWWHTLLL 461
              +ACG  HT LL
Sbjct: 256 VEFLACGGSHTALL 269


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC               Q S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVTV 305



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 98/172 (56%), Gaps = 3/172 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H  + T  G + T+G   Y Q G+G+TN  L P   S+ L + QV ++A G +H++ +
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG      + + G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMCCMAVVDTGEV 226

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  Q+
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 122/314 (38%), Gaps = 88/314 (28%)

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
           G G    LAT+E G++ TWG       S L +G       P  + T  S   V++ A G 
Sbjct: 106 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGS 161

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
            H + +T  GEV+ WG+                     +++G+  +  T   P       
Sbjct: 162 YHSLVLTSDGEVFAWGY---------------------NNSGQVGSGSTVNQP------- 193

Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
              + RR T   + +                         +  +A G    + + D G+V
Sbjct: 194 ---IPRRVTGCLQNKV------------------------VVTIACGQMCCMAVVDTGEV 226

Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
           + WGY G GQLGLGS     PTP  +  L+           +R              V+ 
Sbjct: 227 YVWGYNGNGQLGLGSSGNQ-PTPCRVAALQG----------IR--------------VQR 261

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +   D  +E  A    HT
Sbjct: 262 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHT 321

Query: 354 VCISVE-GRVYVFG 366
                + G VY++G
Sbjct: 322 SAAKTQGGHVYMWG 335



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
 gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
          Length = 596

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 139/279 (49%), Gaps = 41/279 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P +V    G  I KVA G  HTL LS  G+V+ WG G  G+LG G         HL    
Sbjct: 231 PHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGRLGQG---------HL---- 277

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV---TDAGALLTFGWGLYG 319
                 +DR   +R   + S        + ++AC   HSA V   +  GAL +FG   YG
Sbjct: 278 ------RDRFTPIRICGLESLN------LTQVACNEFHSAAVCACSKQGALFSFGENDYG 325

Query: 320 QCGHGSTNDQLRPSY---ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           Q   G   D+L  SY    SSL + ++ ++A G +H+  ++  G ++++G N+ GQLG G
Sbjct: 326 QL--GIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNG 383

Query: 377 VDQAENVPKLLET-PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG--LGDSI 433
              + ++P LLE    L       V+CG +HSA +T+ G++   G N YGQLG  L D+ 
Sbjct: 384 NYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQ 443

Query: 434 DRNIPSLVPIHGFLPRN-----IACGWWHTLLLAETTQI 467
           D ++   V +   +P +     +ACG  HT ++ +  +I
Sbjct: 444 DDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEI 482



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 43/250 (17%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           +  D   ++ WG G  G LG G   +    PH++  L     GKD               
Sbjct: 202 VKEDACDIYTWGEGTNGMLGHGEDTQEAH-PHVVEAL----LGKD--------------- 241

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
                ++++ACG  H+  ++  G + ++G G  G+ G G   D+  P     L  + + Q
Sbjct: 242 -----IRKVACGATHTLALSKDGEVFSWGSGYGGRLGQGHLRDRFTPIRICGLESLNLTQ 296

Query: 346 IAAGLWHTVCI---SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI-----LESKRA 397
           +A   +H+  +   S +G ++ FG N +GQLG   D      KLL + I     L   + 
Sbjct: 297 VACNEFHSAAVCACSKQGALFSFGENDYGQLGIPED------KLLTSYIQCVSSLSEHKI 350

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN----IAC 453
             V+CG+ HSA L E G +  WG N+ GQLG G+    ++PSL+     L  +    +AC
Sbjct: 351 SRVACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVAC 410

Query: 454 GWWHTLLLAE 463
           G  H+  + +
Sbjct: 411 GDQHSAFITK 420



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 148/341 (43%), Gaps = 58/341 (17%)

Query: 91  HGE-TPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
           HGE T E  P   EA     + K A G  H +++++ GEV++WG             +G 
Sbjct: 222 HGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWG-----------SGYGG 270

Query: 146 ---AGSFQKDST-----GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG-- 195
               G  +   T     G +S   T+ A      A      ++    +  E++    G  
Sbjct: 271 RLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQLGIP 330

Query: 196 -DEFFT-LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
            D+  T    C+ +L+   KI++VA G  H+  L++ G +W WG    GQLG G+     
Sbjct: 331 EDKLLTSYIQCVSSLSEH-KISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGNY---- 385

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
            T   +P L  A  G D    +R  +V            E+ACG +HSA +T  G +   
Sbjct: 386 -TSTSLPSLLEA--GND----LRHDAV-----------MEVACGDQHSAFITKKGRMFCC 427

Query: 314 GWGLYGQCG-HGSTNDQLRPSYASSL-----MDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G   YGQ G H + N     +Y  ++      D +   +A G  HT  ++  G ++ +G 
Sbjct: 428 GDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGR 487

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            + G+LG G +   ++P  +E   +E K  + VSCG  H+A
Sbjct: 488 GKGGRLGHGDNLNRHLPTEIEIG-MEGKHVRGVSCGRAHTA 527


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC               Q S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVTV 305



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 99/172 (57%), Gaps = 3/172 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAAGLWHTVCI 356
           G H  + T  G + T+G   Y Q G+G+TN  L P   +++L + QV ++A G +H++ +
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG      + + G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMCCMAVVDTGEV 226

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  Q+
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 122/314 (38%), Gaps = 88/314 (28%)

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
           G G    LAT+E G++ TWG       S L +G       P  + T  S   V++ A G 
Sbjct: 106 GSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGS 161

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
            H + +T  GEV+ WG+                     +++G+  +  T   P       
Sbjct: 162 YHSLVLTSDGEVFAWGY---------------------NNSGQVGSGSTVNQP------- 193

Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
              + RR T   + +                         +  +A G    + + D G+V
Sbjct: 194 ---IPRRVTGCLQNKV------------------------VVTIACGQMCCMAVVDTGEV 226

Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
           + WGY G GQLGLGS     PTP  +  L+           +R              V+ 
Sbjct: 227 YVWGYNGNGQLGLGSSGNQ-PTPCRVAALQG----------IR--------------VQR 261

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +   D  +E  A    HT
Sbjct: 262 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHT 321

Query: 354 VCISVE-GRVYVFG 366
                + G VY++G
Sbjct: 322 SAAKTQGGHVYMWG 335



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 115/225 (51%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 140 LVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++ A                        V  IACG   S  V DAG +  +G+   
Sbjct: 199 TGCLQNKA------------------------VVNIACGQMCSMAVVDAGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TPI +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWG 335



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPCYI---------------STNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+    + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ + +
Sbjct: 294 KSNQSYPTPISV 305



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P Y S+ L + QV ++
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKAVVNIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
           S  + + G+V  WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 217 SMAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 97/235 (41%), Gaps = 42/235 (17%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCY 144

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+              ++G     ST  
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 191

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
           Q  +P         +A   +   +  S A  ++                 +SG++    +
Sbjct: 192 Q-PIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQ---PT 247

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
           PC V    G+ + +VA G  HTL+L+D GQV+ WG    GQLG G++     PTP
Sbjct: 248 PCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 134/290 (46%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----- 265
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  +  L        
Sbjct: 1296 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKV 1355

Query: 266  ---ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 1356 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 1415

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG T  QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 1416 SAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTD 1475

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 1476 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 1533

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + ++ Q+
Sbjct: 1534 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 1583



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 132/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 1352 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 1394

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG T  QL+
Sbjct: 1395 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLK 1446

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 1447 PKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 1506

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 1507 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 1564

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 1565 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 1624

Query: 457  HTL 459
            H++
Sbjct: 1625 HSV 1627



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG GSR      +++ 
Sbjct: 2335 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIE 2394

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 2395 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 2454

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
             IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 2455 GIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGS 2514

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+A  ++ G+ H    
Sbjct: 2515 QFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKAIAIATGSLHCVCC 2572

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 2573 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 2622



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 141/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 2350 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGA 2409

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 2410 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 2453

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 2454 VGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 2496

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V  + CG + S  +T AGA+ T+G G Y + GHGS +   RP
Sbjct: 2497 MKI--DSLTGLG------VVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRP 2548

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +   IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 2549 RQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 2606

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 2607 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 2641



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 151/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    PLP + +     VVK 
Sbjct: 1303 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGLSSGTVPLPRQVTALSSYVVKK 1354

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H  ++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 1355 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 1404

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 1405 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACG 1464

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 1465 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 1506

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHGS     +P     L
Sbjct: 1507 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 1559

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 1560 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 1617

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 1618 RVACGSSHSVAWT 1630



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 49/247 (19%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C   AA    RP+ +  G     +V + 
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----CEALAAL---RPVQLIGGEQTLFAVTAD 2311

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 2312 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 2371

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHGS +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 2372 GEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 2431

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 2432 GHSDSEDQLKPKLVEA--LQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 2489

Query: 432  SIDRNIP 438
            S    +P
Sbjct: 2490 SDGCKVP 2496



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 4/139 (2%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            PS++ +L  + V Q+A G      ++VEG+VY  G    G+LG G+     VP   +   
Sbjct: 1288 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSG-TVPLPRQVTA 1346

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L S   K V+   G RH+  LT DG+V SWG    G+LG    ++ + P L+  +     
Sbjct: 1347 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRI 1406

Query: 449  RNIACGWWHTLLLAETTQI 467
            R+IACG  H+  L  + ++
Sbjct: 1407 RDIACGSSHSAALTSSGEL 1425



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A +++G + TWG  D     +  S  H   P           +  A G  HCV 
Sbjct: 2513 GSQFSVALTKAGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKAIAIATGSLHCVC 2571

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 2572 CTEDGEVYTWG 2582



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 2263 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAG 2322

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      +   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 2323 GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 2382

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
                 + P ++  + G    ++A G  H+
Sbjct: 2383 SRSPCDRPRVIESLRGIEVVDVAAGGAHS 2411



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 2360 LALSSEGEVYSWGEAED--------GKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHS 2411

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 2412 ACVTAAGDLYTWG 2424


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 128/273 (46%), Gaps = 36/273 (13%)

Query: 196 DEFFTLSP--CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           DE   L P  C   +N  V+   V  G RHT+ + D G V+  G    GQLG        
Sbjct: 2   DEEVVLEPRRCDFFINKNVR--DVGCGSRHTVFVLDDGTVYTCGCNDLGQLG-------- 51

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
                     H  S K +P        +  G      +  ++CG  H+  + D G + ++
Sbjct: 52  ----------HDKSRK-KP--------DQVGALDAQTIVAVSCGEAHTLALNDKGQVFSW 92

Query: 314 GWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G   +GQ G     D +R P    SL DIQ+ Q+A G  H++ +S E  +Y +G NQ+GQ
Sbjct: 93  GHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQ 152

Query: 373 LGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           LG G + + E+ P+ +++  L       ++ G  HS  LT  G +  WG NK+GQLGL D
Sbjct: 153 LGLGSEIKKESAPRHIKS--LAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLND 210

Query: 432 SIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
             DR+ P+L+  +      +I CG  HT  L +
Sbjct: 211 ETDRSAPALLKSLRSQKIIHICCGEDHTAALTK 243



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 107/234 (45%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS    ++ WG    GQLGLGS IK    P  I  L         
Sbjct: 121 IQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSL--------- 171

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                         AG  +   IA GG HS  +T +GA+  FGWG   +GQ G     D+
Sbjct: 172 --------------AGIPFA-HIAAGGGHSFALTMSGAI--FGWGRNKFGQLGLNDETDR 214

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 215 SAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFE 274

Query: 389 TPILESKRAKVVSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H+ A +   G++ S+G    GQLG G + +R  P  V
Sbjct: 275 ---LMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 325



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 116/286 (40%), Gaps = 41/286 (14%)

Query: 55  VCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASVVKAAA 111
           +    CG A  LA ++ G++ +WG A   GQ  L+  + +   P       +  +V+ A 
Sbjct: 70  IVAVSCGEAHTLALNDKGQVFSWGHAA-HGQIGLSVAEDYIRVPRNIKSLYDIQIVQVAC 128

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ----SALPTEQAPP 167
           G  H +++++  ++Y+WG  +           G     +K+S  +     + +P      
Sbjct: 129 GHHHSLALSKESDIYSWGQNQ-------YGQLGLGSEIKKESAPRHIKSLAGIPFAHIAA 181

Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
               +    +        R +       DE    +P L+      KI  +  G  HT  L
Sbjct: 182 GGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAAL 241

Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
           +  G V+ +G GG GQLG  S      T H +           R +    GS+       
Sbjct: 242 TKEGGVFTFGAGGYGQLGHNS------TNHEV---------NPRKVFELMGSI------- 279

Query: 288 RSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
              V +IACG +H+ A V  +G + +FG G  GQ G GST+++  P
Sbjct: 280 ---VTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 322


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 173/424 (40%), Gaps = 99/424 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P   R C     K V   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEVVLEP---RRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG             F + G    
Sbjct: 72  RKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWG-------------FAADG---- 114

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
                Q  LP                                 G E +T  P  +     
Sbjct: 115 -----QLGLP---------------------------------GTEEYTRVPRNIKSLSD 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           V+I +VA G  H+L LS   +V+ WG    GQLGLG  +K   +P LI  L     G   
Sbjct: 137 VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFG--- 193

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                                +IA GG HS  +T +GA+  FGWG   +GQ G    ND+
Sbjct: 194 ---------------------QIAAGGAHSFALTLSGAV--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I+ G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG-F 446
              L       ++CG +H SA +   G++ S+G    GQLG+G + +R  P   P+ G F
Sbjct: 291 ---LMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSP--FPVKGNF 345

Query: 447 LPRN 450
           LP N
Sbjct: 346 LPFN 349



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 133/273 (48%), Gaps = 36/273 (13%)

Query: 196 DEFFTLSP--CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           DE   L P  C   LN  V+   V  G RHT+ + D G V+  G    GQLG        
Sbjct: 18  DEEVVLEPRRCNFFLNKTVR--DVGCGLRHTVFVLDDGTVYTCGCNDLGQLG-------- 67

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
                     H  S K RP  V  G++++        +  ++CG  H+  + D G +  +
Sbjct: 68  ----------HEKSRK-RPEQV--GALDAQN------IVAVSCGEAHTLTLNDKGQVYAW 108

Query: 314 GWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G   T +  R P    SL D+Q+ Q+A G +H++ +S    V+ +G N+ GQ
Sbjct: 109 GFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQ 168

Query: 373 LGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           LG G D + +  P+L+++ +L     ++ + GA HS  LT  G V  WG NK+GQLGL D
Sbjct: 169 LGLGYDLKKQTSPQLIKS-LLGIPFGQIAAGGA-HSFALTLSGAVFGWGRNKFGQLGLND 226

Query: 432 SIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
             DR +P+L+  +       I+CG  HT  L +
Sbjct: 227 ENDRYVPNLLKSLRSQKIVYISCGEDHTAALTK 259



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P   +  ++  V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG+   GQL
Sbjct: 61  NDLGQLGH--EKSRKRPE--QVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  +       +ACG++H+L L++ +++
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQ---IVQVACGYYHSLALSKGSEV 158


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 173/424 (40%), Gaps = 99/424 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P   R C     K V   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEVVLEP---RRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG             F + G    
Sbjct: 72  RKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWG-------------FAADG---- 114

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
                Q  LP                                 G E +T  P  +     
Sbjct: 115 -----QLGLP---------------------------------GTEEYTRVPRNIKSLSD 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           V+I +VA G  H+L LS   +V+ WG    GQLGLG  +K   +P LI  L     G   
Sbjct: 137 VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFG--- 193

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                                +IA GG HS  +T +GA+  FGWG   +GQ G    ND+
Sbjct: 194 ---------------------QIAAGGAHSFALTLSGAV--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I+ G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG-F 446
              L       ++CG +H SA +   G++ S+G    GQLG+G + +R  P   P+ G F
Sbjct: 291 ---LMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSP--FPVKGNF 345

Query: 447 LPRN 450
           LP N
Sbjct: 346 LPFN 349



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 133/273 (48%), Gaps = 36/273 (13%)

Query: 196 DEFFTLSP--CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           DE   L P  C   LN  V+   V  G RHT+ + D G V+  G    GQLG        
Sbjct: 18  DEEVVLEPRRCNFFLNKTVR--DVGCGLRHTVFVLDDGTVYTCGCNDLGQLG-------- 67

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
                     H  S K RP  V  G++++        +  ++CG  H+  + D G +  +
Sbjct: 68  ----------HEKSRK-RPEQV--GALDAQN------IVAVSCGEAHTLTLNDKGQVYAW 108

Query: 314 GWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G   T +  R P    SL D+Q+ Q+A G +H++ +S    V+ +G N+ GQ
Sbjct: 109 GFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQ 168

Query: 373 LGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           LG G D + +  P+L+++ +L     ++ + GA HS  LT  G V  WG NK+GQLGL D
Sbjct: 169 LGLGYDLKKQTSPQLIKS-LLGIPFGQIAAGGA-HSFALTLSGAVFGWGRNKFGQLGLND 226

Query: 432 SIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
             DR +P+L+  +       I+CG  HT  L +
Sbjct: 227 ENDRYVPNLLKSLRSQKIVYISCGEDHTAALTK 259



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P   +  ++  V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG+   GQL
Sbjct: 61  NDLGQLGH--EKSRKRPE--QVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  +       +ACG++H+L L++ +++
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQ---IVQVACGYYHSLALSKGSEV 158


>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 569

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 143/361 (39%), Gaps = 49/361 (13%)

Query: 87  TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
           T+  +   P P  LP    V  AA G AH ++VT AG V  WG R  V            
Sbjct: 79  TTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWG-RNAV------------ 125

Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAG-------EEVVKRRKTSSAREESENPASGDEFF 199
           G     +T  +S     + PP                +    T  A  ++     GD   
Sbjct: 126 GQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR 185

Query: 200 T--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           T   +P  V+   G  IT VAAGG H+L L+  G V+ WG    GQLG G+R        
Sbjct: 186 TNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRTN------ 239

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
                      +  P++V        G    + V  IA GG HS  VT AG    +G   
Sbjct: 240 -----------RSTPVVV--------GLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNF 280

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
            GQ G GS  ++    +        V  +A GL H++ ++  G V  +G N +GQLG G 
Sbjct: 281 VGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGT 340

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
            +  N P  +  P         V+ G      LT  G VL+WG N  GQLG G +  R  
Sbjct: 341 ARDRNTPGSVSLP--PGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLGDGTTTVRRT 398

Query: 438 P 438
           P
Sbjct: 399 P 399



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 107/242 (44%), Gaps = 27/242 (11%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  V L PG  +T VAAG  H+L L+  G V+ WG    GQLG G+R            
Sbjct: 138 TPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTRTN---------- 187

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                  +  P+ V   S         + +  +A GG HS  +T AG +  +G    GQ 
Sbjct: 188 -------RSTPVAVSFPS--------GTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQL 232

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           G G+  ++  P      +   V  IA G  H++ ++  G    +G N  GQLG G +   
Sbjct: 233 GDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNINR 292

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           +    +  P         V+ G  HS  LT  G VLSWG N +GQLG G + DRN P  V
Sbjct: 293 DASVHVRLP--PGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTPGSV 350

Query: 442 PI 443
            +
Sbjct: 351 SL 352



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 113/264 (42%), Gaps = 36/264 (13%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V L  G ++T  A G  H+L ++  G V  WG    GQLG G+ I            
Sbjct: 87  PIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVGQLGDGTTIN----------- 135

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                 +  P+ VR            + V  +A G  HS  +T AG +  +G    GQ G
Sbjct: 136 ------RSTPVDVRLPP--------GTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLG 181

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            G+  ++  P   S      +  +AAG  H++ ++  G V+ +G N  GQLG G     +
Sbjct: 182 DGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRTNRS 241

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            P ++  P+        ++ G  HS  +T  G   +WG N  GQLG G +I+R+      
Sbjct: 242 TPVVVGLPV--GTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNINRD----AS 295

Query: 443 IHGFLP-----RNIACGWWHTLLL 461
           +H  LP       +A G  H+L L
Sbjct: 296 VHVRLPPGTTVTAVAGGLTHSLAL 319



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 138/354 (38%), Gaps = 39/354 (11%)

Query: 41  PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           PIP  L  G       GG    +LA + +G ++ WG  +  GQ    +  +  TP    L
Sbjct: 87  PIPVGLPKGTEVTAAAGGDA-HSLAVTSAGTVLAWGR-NAVGQLGDGTTINRSTPVDVRL 144

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
           P   +V   AAG+ H +++T AG V+ WG          T   G  G+    ST    + 
Sbjct: 145 PPGTTVTAVAAGFNHSLALTSAGTVFAWGDNS-------TGQLGD-GTRTNRSTPVAVSF 196

Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTLSPCLVTLNPGVKITK 216
           P+     +    G   +      +     +N       G      +P +V L  G  +T 
Sbjct: 197 PSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVVVGLPVGTIVTA 256

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A GG H+L ++  G    WG    GQLG GS I                         R
Sbjct: 257 IAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNIN------------------------R 292

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
             SV+     G + V  +A G  HS  +T  G +L++G   +GQ G G+  D+  P   S
Sbjct: 293 DASVHVRLPPG-TTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTPGSVS 351

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
               + +  +AAG    + ++  G V  +GGN  GQLG G       P     P
Sbjct: 352 LPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLGDGTTTVRRTPVAASLP 405



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTND-QLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           R S     + A+L +G   YGQ G G+TN+ +  P         +V   A G  H++ ++
Sbjct: 53  RPSPTTVASDAVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVT 112

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
             G V  +G N  GQLG G     + P  +  P         V+ G  HS  LT  G V 
Sbjct: 113 SAGTVLAWGRNAVGQLGDGTTINRSTPVDVRLP--PGTTVTAVAAGFNHSLALTSAGTVF 170

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLL 461
           +WG N  GQLG G   +R+ P  V    G +   +A G  H+L L
Sbjct: 171 AWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLAL 215


>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
          Length = 2141

 Score =  113 bits (283), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 91/285 (31%), Positives = 134/285 (47%), Gaps = 37/285 (12%)

Query: 187 EESEN-PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           +E EN     +E     P +V  +  + I KV+ G   TL LS  G V+ WG G  G LG
Sbjct: 226 KEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLG 285

Query: 246 LGSR-IKMVPT-------PHLIPCLEHAASGKDRPL-LVRQGSVNSSG-----------K 285
            G + + M P         HL   ++  A G +  L L  QG V S G           +
Sbjct: 286 QGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDE 345

Query: 286 AGRSYVKEI-----------ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
            G +  KEI             G   SA ++    L  +G GL+G+ G G T + L+P  
Sbjct: 346 TGENIPKEIIGLRQYKILMIEAGEGSSAAISIKNELFIWGVGLHGRLGTGKTANVLKPVM 405

Query: 335 ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPIL 392
              L D +VE IA G  H++CI   G+   +G ++ G+LG  T +D+    PK L T  L
Sbjct: 406 LEDLKDQKVEDIALGSNHSLCILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVT--L 463

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           + ++   ++ G  HS  LTE+G++ S+G +K G+LG  D I  N+
Sbjct: 464 DKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLGY-DEIKGNV 507



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 49/284 (17%)

Query: 231 GQVWGWGYGGEGQLGLGSRIKMV-----PTPHLIP------------CLEHAASGKDRPL 273
           G V+ WG   EG+LG+    K +         LIP             +   + G    L
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTL 265

Query: 274 LVRQ-------GSVNSSG------------------KAGRSY--VKEIACGGRHSAVVTD 306
            + Q       G  NS G                  K G  +  +K+IACG  H   +  
Sbjct: 266 ALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDH 325

Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            G + ++G G  G+ GHG    +  P     L   ++  I AG   +  IS++  ++++G
Sbjct: 326 QGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAAISIKNELFIWG 385

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
               G+LGTG  +  NV K +    L+ ++ + ++ G+ HS  +  +G+ + WG +K G+
Sbjct: 386 VGLHGRLGTG--KTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGSSKDGK 443

Query: 427 LGLGDSIDRNI---PSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  ++DRN      LV +       IA G +H++ L E  +I
Sbjct: 444 LGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEI 487



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 55/241 (22%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           +KI  V+ G  H L ++  G  +GWG    GQLG+G +  +V  P  I  L+      D+
Sbjct: 675 MKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQ------DK 728

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG------HGS 325
            +++                   A G  HS  ++D G +L  G+  +G+ G       G 
Sbjct: 729 VIIM------------------TASGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGG 770

Query: 326 TNDQLRP------SYASSLMDIQVEQ-------------IAAGLWHTVCISVEGR----- 361
            + +  P      +Y   L++ ++E              IAAG  H++ I    R     
Sbjct: 771 ADKKENPDEIYDENYQRQLIETKIELTPKIIKGLESIGFIAAGKNHSIAIRTYKRKEKAM 830

Query: 362 -VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            ++ +G    GQ G G  Q + +P++++ P+L+  +    SCG++H+  L   G +  +G
Sbjct: 831 KLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFG 890

Query: 421 W 421
           +
Sbjct: 891 Y 891



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 90/398 (22%), Positives = 161/398 (40%), Gaps = 80/398 (20%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHC 116
           G   +L    +GK + WGS+ D G+  L +       +P  L T  +  + + AAG  H 
Sbjct: 420 GSNHSLCILRNGKAMCWGSSKD-GKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHS 478

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE--QAPPSDKRAGE 174
           +++TE GE+Y++G          ++D    G    D       +P +    P   ++ G 
Sbjct: 479 IALTENGEIYSFG---------NSKD----GKLGYDEIKGNVQIPRKITNCPIFARKTG- 524

Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
                   +  R++ +     D+  T+      L  G ++ +   G   T+ L + GQ++
Sbjct: 525 -------LNDRRDKYQLFNQFDDQMTVISNNQQLG-GCEVIQAQCGFNSTVFLLNDGQMY 576

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
             G    GQLG   R                A GKD+     +  +NS+    +      
Sbjct: 577 VCGSNKYGQLGFSKR----------------AGGKDKD--GNKMLINSNNDGNQ------ 612

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ------------ 342
             GG   A   D         G + Q    +++D L P     L ++Q            
Sbjct: 613 --GGMSGANDNDNDDDDNGIGGGFLQ---QNSDDVLPPQLKKKLAELQQLQDVEKPSPLT 667

Query: 343 ---------VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPIL 392
                    ++ ++ G +H + ++ EG  + +G N  GQLG G  D   + P  +++  L
Sbjct: 668 IYHDAVQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKS--L 725

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           + K   + + G  HS  L++ G+VL  G+N++G+LG+G
Sbjct: 726 QDKVIIMTASGESHSLFLSDLGEVLCSGFNEFGELGIG 763



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 37/212 (17%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQL-RPSYASSLMDIQVEQIA 347
           +K ++ G  H   VT  GA  TFGWG    GQ G G  +  + +P+   SL D  +   A
Sbjct: 677 IKHVSTGYFHVLAVTHEGA--TFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTA 734

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGV-------DQAENVP---------KLLETPI 391
           +G  H++ +S  G V   G N+FG+LG G+       D+ EN           +L+ET I
Sbjct: 735 SGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKI 794

Query: 392 -LESKRAK------VVSCGARHSAVL------TEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
            L  K  K       ++ G  HS  +       +  ++ +WG   +GQ G G   +  +P
Sbjct: 795 ELTPKIIKGLESIGFIAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLP 854

Query: 439 SLVPIHGFLPRNI---ACGWWHTLLLAETTQI 467
            +V +           +CG  HT+ L  T  I
Sbjct: 855 QIVKVPVLKDTKFIQASCGSKHTIALDTTGHI 886


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 32/271 (11%)

Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           SP L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R          
Sbjct: 377 SPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNR---------- 426

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
                  +  DRP ++     +  GK     V +IA GG HSA +T  G L T+G G YG
Sbjct: 427 -------NSCDRPRVIE----SLRGKE----VVDIAAGGAHSACITSTGELFTWGKGRYG 471

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           + GHG + DQ++P    +L  ++V  +A  +G   T+CI+ +  V+ +G   +G+LG G 
Sbjct: 472 RLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGG 531

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRN 436
                +P+ +E  I   +    V CG++ S  LT+ G V +WG   Y +LG G D   R 
Sbjct: 532 SDGCKIPQKVEALI--GQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRR 589

Query: 437 IPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
              +  + G    +IA G  H +   +  ++
Sbjct: 590 PRKVAALQGKNVISIATGSLHCVACTDQGEV 620



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 119/244 (48%), Gaps = 43/244 (17%)

Query: 231 GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
           GQ+WGWG+   GQLG   G+++K+ PTP    C   AA    RP+ +  G     +V ++
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKL-PTP----CDALAAL---RPVQLIGGEQTLFAVYAT 359

Query: 284 GKAGRS----------------------YVKEIAC--GGRHSAVVTDAGALLTFGWGLYG 319
           G                           ++K++A   GG+H   ++  G + ++G    G
Sbjct: 360 GYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDG 419

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG+ N   RP    SL   +V  IAAG  H+ CI+  G ++ +G  ++G+LG G  +
Sbjct: 420 KLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSE 479

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNI 437
            +  PKL+E   L+  R   V+CG+  +  L  T+D  V SWG   YG+LG G S    I
Sbjct: 480 DQMKPKLVEA--LKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKI 537

Query: 438 PSLV 441
           P  V
Sbjct: 538 PQKV 541



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 134/320 (41%), Gaps = 67/320 (20%)

Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
           V   +G  HC++++  GEV++WG  E           G  G   ++S  +   + + +  
Sbjct: 392 VAVNSGGKHCLALSSEGEVFSWGEAED----------GKLGHGNRNSCDRPRVIESLR-- 439

Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
                 G+EVV     ++    S    S  E FT                 + P LV   
Sbjct: 440 ------GKEVVD---IAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEAL 490

Query: 210 PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
            GV++  VA  +G   TL ++D   VW WG G  G+LG G        P  +  L     
Sbjct: 491 KGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGS-DGCKIPQKVEAL----- 544

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
                  + QG V            ++ CG + S  +T +G + T+G G Y + GHGS +
Sbjct: 545 -------IGQGVV------------KVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDD 585

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
              RP   ++L    V  IA G  H V  + +G V+ +G N  GQLG G   A   P+L+
Sbjct: 586 HVRRPRKVAALQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLV 645

Query: 388 ETPILESKRAKVVSCGARHS 407
               L+ K+   V+CG+ HS
Sbjct: 646 AA--LQGKKINRVACGSAHS 663



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 76/212 (35%), Gaps = 66/212 (31%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
           CG G    L  ++   + +WG  D     Y   G+ G      P   EA     VVK   
Sbjct: 500 CGSGDAQTLCITDDDSVWSWGDGD-----YGKLGRGGSDGCKIPQKVEALIGQGVVKVEC 554

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
           G    V++T++G VYTWG                 G + +   G                
Sbjct: 555 GSQFSVALTKSGCVYTWG----------------KGDYHRLGHG---------------- 582

Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
           + + V + RK ++ +                        G  +  +A G  H +  +D G
Sbjct: 583 SDDHVRRPRKVAALQ------------------------GKNVISIATGSLHCVACTDQG 618

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           +V+ WG   EGQLG GS    +P P L+  L+
Sbjct: 619 EVFTWGDNDEGQLGDGS-TSAIPRPRLVAALQ 649



 Score = 38.5 bits (88), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTE 121
           LA S  G++ +WG A+D     L  G       P  + +     VV  AAG AH   +T 
Sbjct: 402 LALSSEGEVFSWGEAED---GKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITS 458

Query: 122 AGEVYTWG 129
            GE++TWG
Sbjct: 459 TGELFTWG 466


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VTEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPAPVVV 305



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 114/224 (50%), Gaps = 32/224 (14%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K +T+VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 140 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V + G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVNIACGQMCSMAVVNTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+++++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPILESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P  +   ++E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYPAPV---VVEKDRIVEIAACHSAHTSAAKTQGGHVYMWG 335



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVVNIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLAETT 465
           S  +   G+V  WG+N  GQLGLG S ++  P  +  + G   + +ACG+ HTL+L +  
Sbjct: 217 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 95/235 (40%), Gaps = 36/235 (15%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 89  PRRLDALSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 144

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V + A G  H + +T  GEV+ WG             + ++G     ST  
Sbjct: 145 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 191

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCL 205
           Q  +P         +    +   +  S A   +        +G+    L       +PC 
Sbjct: 192 Q-PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           +    G++I +VA G  HTL+L+D GQV+ WG    GQLG G++     P P ++
Sbjct: 251 IAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVV 305



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 4/111 (3%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A   +G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           +  GQ  L S  +  TP          + + A G+AH + +T+ G+VY WG
Sbjct: 232 NGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWG 282


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 122/268 (45%), Gaps = 36/268 (13%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L TL+    +  V+ G  H+L +   G+V+ WG   EGQLG+G   +    P  I  L
Sbjct: 42  PALETLH----VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTL 97

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                       + ++ACG  HS  +++ G + ++G   +GQ G
Sbjct: 98  ADIK------------------------IIQVACGHYHSLALSEDGQVFSWGKNSHGQLG 133

Query: 323 HGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G     Q  P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        
Sbjct: 134 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALS---GN 190

Query: 382 NVPKLLETPIL----ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           N P     P+L    ++     +SCG  H+AVLT+DG+V ++G N YGQLG   + ++  
Sbjct: 191 NAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRG 250

Query: 438 PSLVPIHGFLPRNIACGWWHTLLLAETT 465
           P LV     L   I CG +HTL    TT
Sbjct: 251 PQLVERIEGLVSQIDCGSYHTLAYVYTT 278



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 136/343 (39%), Gaps = 98/343 (28%)

Query: 30  GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
           G  PE+ P L  +   L  CG +            +LA    G++  WG+A  EGQ  L 
Sbjct: 35  GEQPERIPALETLHVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 80

Query: 88  SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
            G+  ET   P+      +  +++ A G  H ++++E G+V++WG              G
Sbjct: 81  IGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWG----------KNSHG 130

Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
             G       GK+   P+ QA P   R+ E                              
Sbjct: 131 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 151

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
                 G+ + +VAAGG H+  LS  G  +GWG    GQL L                 +
Sbjct: 152 ------GIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSG--------------NN 191

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
           A   + +P+LV        G      V  I+CG  H+AV+T  G + TFG   YGQ GH 
Sbjct: 192 APVQRYKPVLV--------GALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHD 243

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFG 366
           ST ++  P     +  + V QI  G +HT+  +   G+V  FG
Sbjct: 244 STAEKRGPQLVERIEGL-VSQIDCGSYHTLAYVYTTGQVVSFG 285



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 12/126 (9%)

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           +G  H++ +  +G V   G N  GQLG  G  + E   ++   P LE+    +VSCG  H
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI---PALETLHVALVSCGKEH 58

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGD-----SIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
           S  +   G+V +WG    GQLG+G+      I + I +L  I       +ACG +H+L L
Sbjct: 59  SLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKII---QVACGHYHSLAL 115

Query: 462 AETTQI 467
           +E  Q+
Sbjct: 116 SEDGQV 121


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S EG  + +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 172/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS  G+ + WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V  + F 
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF- 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G   FGQLG G    E V +  ++    +K+ + V CG RH+  + +DG V + G N  G
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 426 QLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           QLG   S  R  P  +V +       ++CG  HTL L +  Q+
Sbjct: 65  QLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105


>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
           griseus]
 gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
          Length = 551

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVVV 305



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VMNIACGQMCSMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP++  K    ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 100/172 (58%), Gaps = 3/172 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++A G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   S  + + G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVMNIACGQMCSMAVVDTGEV 226

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  Q+
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 129/270 (47%), Gaps = 30/270 (11%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P   +     K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K RP  V  G++++        +  ++CG  H+  + D G +  +G+
Sbjct: 68  --------HEKSRK-RPEQV--GALDAQN------IVTVSCGEAHTLALNDKGQVYAWGF 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            + GQ G   T +  R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 AVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLG 170

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            G +  +     +   +L    A++ + GA HS VLT  G V  WG NK+GQLGL D  D
Sbjct: 171 LGYEYKKQASPQIIKSLLGIPFAQIAAGGA-HSFVLTLSGAVFGWGRNKFGQLGLNDEND 229

Query: 435 RNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           R +P+L+  +       I+CG  HT  L +
Sbjct: 230 RYVPNLLKSLRSQKIVYISCGEDHTAALTK 259



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 126/272 (46%), Gaps = 41/272 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
            I  V+ G  HTL L+D GQV+ WG+  +GQLGL    +    P  I  L        A 
Sbjct: 85  NIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVAC 144

Query: 268 GKDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAV 303
           G    L + +GS       N  G+ G  Y                    +IA GG HS V
Sbjct: 145 GYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFV 204

Query: 304 VTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           +T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I+ G  HT  ++ EG 
Sbjct: 205 LTLSGAV--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGG 262

Query: 362 VYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSW 419
           V+ FG   +GQLG      E  P K+ E   L       ++CG +H SA +   G++ S+
Sbjct: 263 VFTFGAGGYGQLGHNSTAHEINPRKVFE---LMGNIVTQIACGRQHTSAFVPSTGRIYSF 319

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHG-FLPRN 450
           G    GQLG+G + +R  P   P+ G +LP N
Sbjct: 320 GLGGNGQLGMGTTSNRKSP--FPVKGNWLPYN 349



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P   S  ++ +V+ +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG+   GQL
Sbjct: 61  NDLGQLGH--EKSRKRPE--QVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLSGTEEYTRVPRNIKSLSDIQ---IVQVACGYFHSLALSKGSEV 158



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 123/288 (42%), Gaps = 41/288 (14%)

Query: 53  KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLT-SGKHGETPEPFPLPTEASVVKA 109
           +++    CG A  LA ++ G++  WG A D GQ  L+ + ++   P      ++  +V+ 
Sbjct: 84  QNIVTVSCGEAHTLALNDKGQVYAWGFAVD-GQLGLSGTEEYTRVPRNIKSLSDIQIVQV 142

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK--QSAL--PTEQA 165
           A G+ H +++++  EV++WG  +           G    ++K ++ +  +S L  P  Q 
Sbjct: 143 ACGYFHSLALSKGSEVFSWGQNK-------YGQLGLGYEYKKQASPQIIKSLLGIPFAQI 195

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
                 +    +        R +       DE     P L+      KI  ++ G  HT 
Sbjct: 196 AAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTA 255

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            L+  G V+ +G GG GQLG  S      T H I           R +    G++     
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNS------TAHEI---------NPRKVFELMGNI----- 295

Query: 286 AGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                V +IACG +H SA V   G + +FG G  GQ G G+T+++  P
Sbjct: 296 -----VTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSP 338


>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
           trifallax]
          Length = 546

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 119/251 (47%), Gaps = 20/251 (7%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + + +VAAG  HTLIL+D G V+  GY       +G+ +   P         +A S  + 
Sbjct: 1   MNVIQVAAGNEHTLILTDCGDVYSGGYN-----EMGNSLSQGP---------NAMSQNNN 46

Query: 272 PLLVRQGSVNSSGKA-GRSYVKEIACGG-RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
               R G +    K  G++ VK  A  G  H   +T+ G + +FG+ + GQ GHG     
Sbjct: 47  NNNTRTGQLKLVEKLRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSI 106

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTV-CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P    +L    V  +    +HT+   + E  +Y  G N +GQLG G    +N P L+E
Sbjct: 107 NSPKQVEALSRKFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIE 166

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
              L  KR   + CG  HS V + DG++ S+G N  GQLG+  S D NI     +     
Sbjct: 167 A--LNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGS-DGNISLPKEVKNLKS 223

Query: 449 RNIACGWWHTL 459
             IACG++HT+
Sbjct: 224 TQIACGYYHTV 234



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 157/367 (42%), Gaps = 78/367 (21%)

Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
           +V++ AAG  H + +T+ G+VY+ G+ E   S        S G          +   T Q
Sbjct: 2   NVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSL-------SQGPNAMSQNNNNNNTRTGQ 54

Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
               +K  G+ +VK                    F  + C                  H 
Sbjct: 55  LKLVEKLRGKNIVK-------------------IFASNGC-----------------EHV 78

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
           + L++ G+V+ +G+  +GQLG G +   + +P  +  L                      
Sbjct: 79  IALTNNGKVFSFGFNVKGQLGHGDQTS-INSPKQVEAL---------------------- 115

Query: 285 KAGRSYVKEIACGGRHSAV-VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              R +V  + C   H+     D   + + G   YGQ G G+ +D+  P+   +L   ++
Sbjct: 116 --SRKFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRI 173

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSC 402
             I  G +H+V  S++G ++ FG N  GQLG TG D   ++PK  E   L+S +   ++C
Sbjct: 174 VSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPK--EVKNLKSTQ---IAC 228

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLV-PIHGFLPRNIACGWWHTLL 460
           G  H+  +  +GQ+ SWG N  GQLG+G  S    +P+LV  +      ++ACG +HTL 
Sbjct: 229 GYYHTVAIN-NGQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLA 287

Query: 461 LAETTQI 467
           L    Q+
Sbjct: 288 LGYAGQL 294



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 25/148 (16%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
             +K T++A G  HT+ +++ GQ++ WG    GQLG+G        P L+  LE      
Sbjct: 219 KNLKSTQIACGYYHTVAINN-GQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLE------ 271

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
           D+ ++                   +ACG  H+  +  AG L +FG   +GQ G G+TN+ 
Sbjct: 272 DQEIV------------------SVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNS 313

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCIS 357
            +P     L+D +V QIAAG +H++ ++
Sbjct: 314 CKPLLIQGLIDKKVCQIAAGFYHSIVLA 341



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 31/210 (14%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP L+    G +I  +  G  H+++ S  G+++ +G    GQLG+      +  P  +  
Sbjct: 161 SPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKN 220

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           L+                             +IACG  H+  + + G L ++G    GQ 
Sbjct: 221 LKST---------------------------QIACGYYHTVAINN-GQLYSWGKNDSGQL 252

Query: 322 GHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
           G G  +  ++ P+    L D ++  +A G +HT+ +   G+++ FG N  GQLG G    
Sbjct: 253 GIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNN 312

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVL 410
              P L++  I   K+   ++ G  HS VL
Sbjct: 313 SCKPLLIQGLI--DKKVCQIAAGFYHSIVL 340


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 137/301 (45%), Gaps = 39/301 (12%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + S  L  LN    + +VA G +    ++  G+V+  G    G+LGLG     VP P  I
Sbjct: 20  SFSETLSALN----VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI 75

Query: 260 PCLEHA--------ASGKDRPLLVRQGSVNS-----SGKAGR-----------------S 289
             L           + G+    L   G V S      GK G                   
Sbjct: 76  TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTK 135

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
            +++IACG  HSA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G
Sbjct: 136 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 195

Query: 350 LW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
                T+ ++ EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S
Sbjct: 196 SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFS 253

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQ 466
             LT+ G V +WG   Y +LG G  +    P +V  + G    ++A G  H L + ++ Q
Sbjct: 254 LALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 313

Query: 467 I 467
           +
Sbjct: 314 V 314



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 83  VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 125

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 126 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 177

Query: 332 PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
           P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 178 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 237

Query: 384 ----------------------------------------------PKLLETPILESKRA 397
                                                         P+++E   L  K+ 
Sbjct: 238 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 295

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
             V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 296 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 355

Query: 457 HTL 459
           H++
Sbjct: 356 HSV 358



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 1064 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIE 1123

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 1124 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 1183

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 1184 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 1243

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 1244 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 1301

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 1302 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 1351



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 1079 VAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 1138

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 1139 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 1182

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 1183 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 1225

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 1226 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 1277

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 1278 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 1335

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 1336 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 1370



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 149/367 (40%), Gaps = 51/367 (13%)

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
            GG     A +  GK+ + G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 34  AGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSS--GTVPIPRQITALSSYVVKKVAVHSG 91

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
             H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 92  GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 141

Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                    TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 142 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 201

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
           L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 202 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 242

Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                 V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 243 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 296

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
            +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 297 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 354

Query: 405 RHSAVLT 411
            HS   T
Sbjct: 355 SHSVAWT 361



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 36/269 (13%)

Query: 202  SPC--LVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            +PC  L TL P   I     GG  TL  ++  G+++  GYG  G+LG     + V TP L
Sbjct: 1014 TPCEALATLRPVQLI-----GGEQTLFAVTADGKLYATGYGAGGRLG-IGGTESVSTPTL 1067

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + +++ +VNS              GG+H   ++  G + ++G    
Sbjct: 1068 LESIQH--------VFIKKVAVNS--------------GGKHCLALSSEGEVYSWGEAKD 1105

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+LG    
Sbjct: 1106 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 1165

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G S    
Sbjct: 1166 EDQLKPKLVEA--LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 1223

Query: 437  IPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            +P  +  + G     + CG   ++ L ++
Sbjct: 1224 VPMKIDSLTGLGVVKVECGSQFSVALTKS 1252



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 4/139 (2%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           PS++ +L  + V Q+A G      ++VEG+VY  G    G+LG G+     VP   +   
Sbjct: 19  PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSG-TVPIPRQITA 77

Query: 392 LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
           L S   K V+   G RH+  LT DG+V SWG    G+LG    ++ + P L+  +     
Sbjct: 78  LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRI 137

Query: 449 RNIACGWWHTLLLAETTQI 467
           R+IACG  H+  L  + ++
Sbjct: 138 RDIACGSSHSAALTSSGEL 156



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 1242 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1300

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 1301 CTEDGEVYTWG 1311



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 992  YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 1051

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      +   V+ G +H   L+ +G+V SWG  K G+LG G
Sbjct: 1052 GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHG 1111

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    ++A G  H+
Sbjct: 1112 NRSPCDRPRVIESLRGIEVVDVAAGGAHS 1140



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 1089 LALSSEGEVYSWGEAKD--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 1140

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 1141 ACVTAAGDLYTWG 1153


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC               Q S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVTM 305



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 99/172 (57%), Gaps = 3/172 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAAGLWHTVCI 356
           G H  + T  G + T+G   Y Q G+G+TN  L P   +++L + QV ++A G +H++ +
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG      + + G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMCCMAVVDTGEV 226

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  Q+
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 122/314 (38%), Gaps = 88/314 (28%)

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
           G G    LAT+E G++ TWG       S L +G       P  + T  S   V++ A G 
Sbjct: 106 GSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGS 161

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
            H + +T  GEV+ WG+                     +++G+  +  T   P       
Sbjct: 162 YHSLVLTSDGEVFAWGY---------------------NNSGQVGSGSTVNQP------- 193

Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
              + RR T   + +                         +  +A G    + + D G+V
Sbjct: 194 ---IPRRVTGCLQNKV------------------------VVTIACGQMCCMAVVDTGEV 226

Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
           + WGY G GQLGLGS     PTP  +  L+           +R              V+ 
Sbjct: 227 YVWGYNGNGQLGLGSSGNQ-PTPCRVAALQG----------IR--------------VQR 261

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +   D  +E  A    HT
Sbjct: 262 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHT 321

Query: 354 VCISVE-GRVYVFG 366
                + G VY++G
Sbjct: 322 SAAKTQGGHVYMWG 335



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 125/266 (46%), Gaps = 36/266 (13%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           L TLN    +  V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L  
Sbjct: 72  LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNG 127

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
                                     + +++CG  HS  ++    + ++G   +GQ G G
Sbjct: 128 IK------------------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 163

Query: 325 STN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
                Q  P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NV
Sbjct: 164 KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS---GRNV 220

Query: 384 PKLLETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           P     P+    L++     +SCGA H+AVLT+DG+V ++G N+ GQLG   + ++  P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 440 LVPIHGFLPRNIACGWWHTLLLAETT 465
           LV I   L   + CG +HTL    TT
Sbjct: 281 LVEIIDGLVSQVDCGSYHTLAYVHTT 306



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + +P  +T   G+KI +V+ G  H+L LS   QV+ WG    GQLGLG       +P  +
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY- 318
             LE        PL                   ++A GG HS  ++  G   +FGWG   
Sbjct: 176 RSLEGI------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNS 209

Query: 319 -GQCGHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ      N  +   +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N+ GQLG
Sbjct: 210 AGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E  I++   ++ V CG+ H+ A +   GQV+S+G
Sbjct: 270 YSPTPEKRGPQLVE--IIDGLVSQ-VDCGSYHTLAYVHTTGQVVSFG 313



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 10/131 (7%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPI--LESKRAK 398
           ++ Q A+G  H++ +    RV   G N  GQLG  G  + E     L  PI  LE+    
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGE-----LPEPIQALETLNVD 78

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWW 456
           +VSCG  HS  +   G+V +WG    GQLG+G+   I      +  ++G     ++CG +
Sbjct: 79  LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHY 138

Query: 457 HTLLLAETTQI 467
           H+L L++ +Q+
Sbjct: 139 HSLALSKDSQV 149


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 34/261 (13%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R  +                 D+
Sbjct: 3114 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3156

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV               ++++ACG  HSA ++  G L T+G G YG+ GHG    QL+
Sbjct: 3157 PRLVEALRAKK--------IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 3208

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++L   +V Q+A G     T+ ++ +G V+ +G   FG+LG G  +    P  +E 
Sbjct: 3209 PKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIER 3268

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              L       + CGA+ S  LT  G+V +WG   Y +LG G   D+++    PI G   R
Sbjct: 3269 --LSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLRGR 3324

Query: 450  ---NIACGWWHTLLLAETTQI 467
               ++A G  H L + +  Q+
Sbjct: 3325 RVIHVAVGALHCLAVTDAGQV 3345



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 134/309 (43%), Gaps = 79/309 (25%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R+                   DR
Sbjct: 4233 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4275

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV   +  S        V +IACG  HSA +T +G +LT+G G YG+ GHG + DQLR
Sbjct: 4276 PKLVEHLNGMS--------VADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLR 4327

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 4328 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 4387

Query: 390  --------------------------------------------------PILESKRAKV 399
                                                                L+ K+   
Sbjct: 4388 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4447

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            ++ G+ H    ++ G+V +WG N  GQLG G       P LV  + G     + CG  HT
Sbjct: 4448 IATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHT 4507

Query: 459  LLLAETTQI 467
            L L+ T+Q+
Sbjct: 4508 LALS-TSQL 4515



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 32/271 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            T S  +  L P      ++ G +   I+S  G+V+  G G  G+LGLG     VP PH +
Sbjct: 3052 TFSQTISRLRP----IHISGGSKSLFIVSQDGKVFACGEGTNGRLGLGV-THNVPLPHQL 3106

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            P L           +V++ +V+S              GG+H+  +T  G + ++G G  G
Sbjct: 3107 PVLHQ--------YVVKKVAVHS--------------GGKHALALTLDGKVFSWGEGEDG 3144

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            + GHG+     +P    +L   ++  +A G  H+  IS +G +Y +G  ++G+LG G + 
Sbjct: 3145 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3204

Query: 380  AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
             +  PK  +   L  +R   V+CG+R   +  LTEDG V SWG   +G+LG G S     
Sbjct: 3205 TQLKPK--QVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSAT 3262

Query: 438  PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P  +  + G     I CG   +L L    ++
Sbjct: 3263 PHEIERLSGIGVIQIECGAQFSLALTRAGEV 3293



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 34/203 (16%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           GRH L +      + WG G + +LG G +  + VPT           S  DR        
Sbjct: 624 GRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPT---------KISALDR-------- 666

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                      VK + CG  +SA +T +G L T+G G YG+ GHG+++DQ  P+   +L 
Sbjct: 667 ----------CVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALA 716

Query: 340 DIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           + ++  +A  +G  H++C++ EG VY +G   +G+LG G   +   P L+ET      R 
Sbjct: 717 EYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVET----LPRV 772

Query: 398 KVVSCGARHSAVLTEDGQVLSWG 420
           + +  GA+ S  LT +G + SWG
Sbjct: 773 QRIFAGAQSSMALTTEGHLYSWG 795



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 34/227 (14%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            ++GWG+   GQLG   GSRIK  PT    PC    A    RP+                 
Sbjct: 4148 IYGWGHNHRGQLGGLEGSRIK-TPT----PC---EALSLLRPV----------------- 4182

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--A 348
              ++A G +    VT  G L   G+G  G+ G G ++    P+   SL  + V+++A  +
Sbjct: 4183 --QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNS 4240

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G  H + ++ EG VY +G  + G+LG G   + + PKL+E   L       ++CG+ HSA
Sbjct: 4241 GGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH--LNGMSVADIACGSAHSA 4298

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
             +T  G VL+WG  +YG+LG GDS D+  P LV  + G+   +IACG
Sbjct: 4299 AITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4345



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 126/308 (40%), Gaps = 35/308 (11%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQA 165
            V   +G  HC+++T  GEVY WG  E        R         +   G   A +    A
Sbjct: 4236 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA 4295

Query: 166  PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGRH 223
              +   +   V+   K    R        GD    L P LV    G +   +A  +G   
Sbjct: 4296 HSAAITSSGHVLTWGKGRYGRL-----GHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQ 4350

Query: 224  TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
            TL ++D   VW WG G  G+LG G                  + G   P  +        
Sbjct: 4351 TLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKLPYKIE------- 4386

Query: 284  GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              AG   +K + CG + S  +T +GA+ T+G G + + GHGS +   RP   ++L   ++
Sbjct: 4387 SLAGLGVIK-VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4445

Query: 344  EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
              IA G  H V  S  G VY +G N  GQLG G   A   P+L+    L+ K    V+CG
Sbjct: 4446 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCG 4503

Query: 404  ARHSAVLT 411
            + H+  L+
Sbjct: 4504 SAHTLALS 4511



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 145/366 (39%), Gaps = 60/366 (16%)

Query: 58   GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---GW 113
            GG       S+ GK+   G   +     L  G     P P  LP     VVK  A   G 
Sbjct: 3067 GGSKSLFIVSQDGKVFACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGG 3123

Query: 114  AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
             H +++T  G+V++WG  E           G  G   + +  K   +   +A    K+  
Sbjct: 3124 KHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKIR 3169

Query: 174  EEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR- 222
            +       +++   + E              GD    L P  VT   G ++ +VA G R 
Sbjct: 3170 DVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRD 3229

Query: 223  -HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
              TL L++ G V+ WG G  G+LG G   +   TPH I  L                   
Sbjct: 3230 AQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSATPHEIERL------------------- 3269

Query: 282  SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
             SG      V +I CG + S  +T AG + T+G G Y + GHG      +P     L   
Sbjct: 3270 -SGIG----VIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR 3324

Query: 342  QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            +V  +A G  H + ++  G+VY +G N  GQ G+G       P L+    L++     V+
Sbjct: 3325 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG--LDAVFVNRVA 3382

Query: 402  CGARHS 407
            CG+ HS
Sbjct: 3383 CGSSHS 3388



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+++ ++  ++   I+ G      +S +G+V+  G    G+LG GV    NVP   + P+
Sbjct: 3051 PTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEGTNGRLGLGV--THNVPLPHQLPV 3108

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT DG+V SWG  + G+LG G+    + P LV  +     
Sbjct: 3109 LHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKI 3168

Query: 449  RNIACGWWHT 458
            R++ACG  H+
Sbjct: 3169 RDVACGSSHS 3178



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 4/154 (2%)

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           C GRH   +       ++G G   + GHG T+ +  P+  S+L D  V+ +  G  ++  
Sbjct: 622 CEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISAL-DRCVKAVFCGCSYSAA 680

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           I+  G +Y +G   +G+LG G    + VP ++            +  G  HS  LT +G 
Sbjct: 681 ITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGL 740

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
           V +WG   YG+LG G+      P LV     LPR
Sbjct: 741 VYAWGDGDYGKLGNGNCNSSLQPILVET---LPR 771



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 17/157 (10%)

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
           R  VK+IAC      +++  G L     G            +L P     L    +  IA
Sbjct: 570 RFQVKQIACSESLLLLLSQDGKLYNCRLG----------KPELEPQPIEELAQETILSIA 619

Query: 348 AGL--WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR-AKVVSCGA 404
                 H + I      Y +G  +  +LG G   A  VP    T I    R  K V CG 
Sbjct: 620 GHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVP----TKISALDRCVKAVFCGC 675

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            +SA +T  G + +WG   YG+LG G+S D+ +P++V
Sbjct: 676 SYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIV 712



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)

Query: 46   LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
            L G  +    CG G    L  ++   + +WG  D     Y   G+ G      P   E+ 
Sbjct: 4334 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4388

Query: 105  ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
                V+K   G    V++T++G VYTWG                 G F +   G      
Sbjct: 4389 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4426

Query: 162  TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
                         + V+R K  +A +                       G KI  +A G 
Sbjct: 4427 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4452

Query: 222  RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             H +  SD G+V+ WG   EGQLG G+ +  +  P L+  L+
Sbjct: 4453 LHCVACSDAGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4493



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
            G   ++A +  G L +WG A   G   +     G   P          +V  A G AHC
Sbjct: 777 AGAQSSMALTTEGHLYSWGKASCLGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHC 836

Query: 117 VSVTEAGEVYTWG 129
           +++T  GEV+ WG
Sbjct: 837 LALTSCGEVFGWG 849


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 117/262 (44%), Gaps = 27/262 (10%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  V L  G  IT V AGG H+L L+  G V  WG    GQLG G              
Sbjct: 79  TPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAWGRNFSGQLGNGDTTN---------- 128

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                         R   V+    AG + +  IA G  HS  +T AG +L +G  L+GQ 
Sbjct: 129 --------------RSTPVDVDLPAG-TTITAIAAGAFHSLALTSAGTVLAWGENLHGQL 173

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           G+G T +   P   S    + +  +AAG +H++ ++  G V  +G N  GQLG G     
Sbjct: 174 GNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGS 233

Query: 382 NVPKLLETPILES-KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           + P  ++ P   +         GA HS  LT  G  L+WG N  GQLG GD+ +R+ P  
Sbjct: 234 STPVDVDLPAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVD 293

Query: 441 VPI-HGFLPRNIACGWWHTLLL 461
           V +  G     +A G  H+L L
Sbjct: 294 VDLPAGVTITAVAAGGLHSLAL 315



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 159/409 (38%), Gaps = 44/409 (10%)

Query: 61  GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
           G + A   S     WG   D GQ    +     TP    LP   ++    AG  H +++T
Sbjct: 47  GPSAAIRASDTYFAWGDNSD-GQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALT 105

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSA---GSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
             G V  WG           R+F      G     ST     LP      +        +
Sbjct: 106 STGAVLAWG-----------RNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSL 154

Query: 178 KRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
                 +     EN      +G      +P  V+L  GV IT VAAG  H+L ++  G V
Sbjct: 155 ALTSAGTVLAWGENLHGQLGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTSTGAV 214

Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
             WG    GQLG G+                  +G   P+      V+       + V  
Sbjct: 215 LAWGDNSNGQLGNGTT-----------------TGSSTPV-----DVDLPAGTTITAVAA 252

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
              G  HS  +T  GA L +G    GQ G+G T ++  P        + +  +AAG  H+
Sbjct: 253 GVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHS 312

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           + ++  G V  +G N  GQLG G     + P  ++ P   +  A  ++ G      LT  
Sbjct: 313 LALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVDLPTGATINA--IAAGFDFGLALTTA 370

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLL 461
           G V++WG N  GQLG GD+I+R+ P  V +  G     +A G  H++ L
Sbjct: 371 GAVVAWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMAL 419



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 147/378 (38%), Gaps = 44/378 (11%)

Query: 40  SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           +P+   L  G +   V  GG   +LA + +G ++ WG  +  GQ       +  TP    
Sbjct: 79  TPVDVYLPAGTTITAVTAGGL-HSLALTSTGAVLAWGR-NFSGQLGNGDTTNRSTPVDVD 136

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           LP   ++   AAG  H +++T AG V  WG         +    G+ G+    ST    +
Sbjct: 137 LPAGTTITAIAAGAFHSLALTSAGTVLAWG-------ENLHGQLGNGGTTNM-STPVGVS 188

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKIT 215
           LP      +        +    T +     +N      +G    + +P  V L  G  IT
Sbjct: 189 LPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVDLPAGTTIT 248

Query: 216 ---KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
                 AG  H+L L+  G    WG   +GQLG G                         
Sbjct: 249 AVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTN--------------------- 287

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
              R   V+    AG + +  +A GG HS  +T AGA++ +G  + GQ G+G+T     P
Sbjct: 288 ---RSTPVDVDLPAGVT-ITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGSSTP 343

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                     +  IAAG    + ++  G V  +G N  GQLG G     + P  ++ P  
Sbjct: 344 VDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNVSGQLGNGDTINRSTPVDVDLPAG 403

Query: 393 ESKRAKVVSCGARHSAVL 410
            +  A  V+ G +HS  L
Sbjct: 404 VTITA--VAAGGQHSMAL 419


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 125/266 (46%), Gaps = 36/266 (13%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           L TLN    +  V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L  
Sbjct: 72  LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNG 127

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
                                     + +++CG  HS  ++    + ++G   +GQ G G
Sbjct: 128 IK------------------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 163

Query: 325 STN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
                Q  P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NV
Sbjct: 164 KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS---GRNV 220

Query: 384 PKLLETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           P     P+    L++     +SCGA H+AVLT+DG+V ++G N+ GQLG   + ++  P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 440 LVPIHGFLPRNIACGWWHTLLLAETT 465
           LV I   L   + CG +HTL    TT
Sbjct: 281 LVEIIDGLVSQVDCGSYHTLAYVHTT 306



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + +P  +T   G+KI +V+ G  H+L LS   QV+ WG    GQLGLG       +P  +
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY- 318
             LE        PL                   ++A GG HS  ++  G   +FGWG   
Sbjct: 176 RSLEGI------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNS 209

Query: 319 -GQCGHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ      N  +   +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N+ GQLG
Sbjct: 210 AGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E  I++   ++ V CG+ H+ A +   GQV+S+G
Sbjct: 270 YSPTPEKRGPQLVE--IIDGLVSQ-VDCGSYHTLAYVHTTGQVVSFG 313



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 10/131 (7%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPI--LESKRAK 398
           ++ Q A+G  H++ +    RV   G N  GQLG  G  + E     L  PI  LE+    
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGE-----LPEPIQALETLNVD 78

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWW 456
           +VSCG  HS  +   G+V +WG    GQLG+G+   I      +  ++G     ++CG +
Sbjct: 79  LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHY 138

Query: 457 HTLLLAETTQI 467
           H+L L++ +Q+
Sbjct: 139 HSLALSKDSQV 149


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 127/272 (46%), Gaps = 30/272 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G +  T  P L+       I +++ G RH+L LSD GQV  WG    GQLG  +  +++ 
Sbjct: 73  GHDLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQ 132

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P ++           R L+ +              V +IACG  HS  +T  G L ++G
Sbjct: 133 LPKVV-----------RQLVSKT-------------VVQIACGNNHSLALTSCGELYSWG 168

Query: 315 WGLYGQCGHGSTNDQLRPSY---ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
             +YGQ G  S  D    +Y    ++L+ I +  IA G  H+  IS  G V+ +G N  G
Sbjct: 169 SNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCG 228

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG   +     P  L+T  L +   + V+CG   S  LT +G V + G   YGQLG G 
Sbjct: 229 QLGLNDETNRAYPTQLKT--LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF 286

Query: 432 SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
           S +  +P +V  + G     +ACG  HTL L 
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 150/363 (41%), Gaps = 61/363 (16%)

Query: 59  GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG    L  + +GK+   GS D    S L      + P   P   +  +++ + G  H 
Sbjct: 46  ACGHRHTLFLTANGKVYACGSND---HSQLGHDLPTKRPLLIPELQDYVIIQISCGSRHS 102

Query: 117 VSVTEAGEVYTWGWREC-----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           +++++ G+V +WG  +C           +   KV R   S    Q       S   T   
Sbjct: 103 LALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCG 162

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
                  G  +  +   +S ++ +             P  +T   G+ +  +A GG H+ 
Sbjct: 163 ELYS--WGSNIYGQLGVNSPKDLTHCNY---------PLRLTTLLGIPLAAIACGGNHSF 211

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           ++S  G V+GWG    GQLGL                       +R    +  ++ + G 
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDE-------------------TNRAYPTQLKTLRTLG- 251

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
                V+ +ACG   S  +T+ G + T G G YGQ GHG +++++ P     LM   + Q
Sbjct: 252 -----VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQ 306

Query: 346 IAAGLWHTV-CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP--------ILESKR 396
           +A G  HT+  +   GRVY FG    GQLGT   ++  +P+++  P        +L+SK 
Sbjct: 307 VACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSALLQSKD 366

Query: 397 AKV 399
           AKV
Sbjct: 367 AKV 369



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 109/239 (45%), Gaps = 34/239 (14%)

Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           +++ WG    GQLGLG    + + TP  IP     A                        
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTA------------------------ 41

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+++ACG RH+  +T  G +   G   + Q GH       RP     L D  + QI+ G 
Sbjct: 42  VEQVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTK--RPLLIPELQDYVIIQISCGS 99

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+V  +G N  GQLG   D +   +PK++    L SK    ++CG  HS  
Sbjct: 100 RHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQ--LVSKTVVQIACGNNHSLA 157

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR---NIP-SLVPIHGFLPRNIACGWWHTLLLAET 464
           LT  G++ SWG N YGQLG+    D    N P  L  + G     IACG  H+ L++++
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +Y +G    GQLG G  + E +    + P       + V+CG RH+  LT +G+V + G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGS 66

Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           N + QLG      R  P L+P +  ++   I+CG  H+L L++  Q+
Sbjct: 67  NDHSQLGHDLPTKR--PLLIPELQDYVIIQISCGSRHSLALSDWGQV 111


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 127/272 (46%), Gaps = 30/272 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G E  T  P L+       + +++ G RH+L LS+ GQV  WG    GQLG  +  ++V 
Sbjct: 73  GHELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQ 132

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P ++           R L+ +              V +IACG  HS  +T  G L ++G
Sbjct: 133 LPKVV-----------RQLVSKT-------------VVQIACGNNHSLALTSCGELYSWG 168

Query: 315 WGLYGQCGHGSTNDQLRPSY---ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
             +YGQ G  S  D    +Y    ++L+ I +  IA G  H+  IS  G V+ +G N  G
Sbjct: 169 SNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCG 228

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG   +     P  L+T  L +   + V+CG   S  LT +G V + G   YGQLG G 
Sbjct: 229 QLGLNDEANRAYPTQLKT--LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF 286

Query: 432 SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
           S +  +P +V  + G     +ACG  HTL L 
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 149/365 (40%), Gaps = 65/365 (17%)

Query: 59  GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWA 114
            CG    L  + +GK+   GS D         G    T  P  +P   +  V++ + G  
Sbjct: 46  ACGHRHTLFLTANGKVYACGSNDHS-----QLGHELPTKRPLLIPELQDYVVIQISCGSR 100

Query: 115 HCVSVTEAGEVYTWGWREC-----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
           H ++++E G+V +WG  +C           V   KV R   S    Q       S   T 
Sbjct: 101 HSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
                    G  +  +   +S ++ +             P  +T   G+ +  +A GG H
Sbjct: 161 CGELYS--WGSNIYGQLGVNSPKDLTHCNY---------PLRLTTLLGIPLAAIACGGNH 209

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           + ++S  G V+GWG    GQLGL                       +R    +  ++ + 
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDE-------------------ANRAYPTQLKTLRTL 250

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
           G      V+ +ACG   S  +T+ G + T G G YGQ GHG +++++ P     LM   +
Sbjct: 251 G------VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTI 304

Query: 344 EQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP--------ILES 394
            Q+A G  HT+  +   GRVY FG    GQLGT   ++  +P+++  P        +L+S
Sbjct: 305 TQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSALLQS 364

Query: 395 KRAKV 399
             AKV
Sbjct: 365 NDAKV 369



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 109/239 (45%), Gaps = 34/239 (14%)

Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           +++ WG    GQLGLG    + + TP  IP     A                        
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTA------------------------ 41

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+++ACG RH+  +T  G +   G   + Q GH       RP     L D  V QI+ G 
Sbjct: 42  VQQVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTK--RPLLIPELQDYVVIQISCGS 99

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+V  +G N  GQLG   D +   +PK++    L SK    ++CG  HS  
Sbjct: 100 RHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQ--LVSKTVVQIACGNNHSLA 157

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR---NIP-SLVPIHGFLPRNIACGWWHTLLLAET 464
           LT  G++ SWG N YGQLG+    D    N P  L  + G     IACG  H+ L++++
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +Y +G    GQLG G  + E +    + P       + V+CG RH+  LT +G+V + G 
Sbjct: 7   LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGS 66

Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           N + QLG      R  P L+P +  ++   I+CG  H+L L+E  Q+
Sbjct: 67  NDHSQLGHELPTKR--PLLIPELQDYVVIQISCGSRHSLALSEWGQV 111


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACG +H+A+VT  G + ++G  L G+ GHG  +D   P +   L +  VE +A G 
Sbjct: 273 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGE 332

Query: 351 WHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           + +  +++ G +Y++GGN   FG LG G +  + VP+ L  P LE      VSCG  H+A
Sbjct: 333 YLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGP-LEGIHVSSVSCGPWHTA 391

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           V+T  GQ+ ++G   +G LG GD    + P  V  + G     +ACG WHT  + E
Sbjct: 392 VVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVACGVWHTAAVVE 447



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 41/244 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ V+ G  HT +++  GQ++ +G G  G LG G R   V TP  +  L+   + + 
Sbjct: 377 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-SSVSTPREVESLKGLRTMR- 434

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                                  +ACG  H+A V +             G L T+G G  
Sbjct: 435 -----------------------VACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK 471

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+Y ++L++    Q+A G   TV ++  G+VY  G   +GQLG    
Sbjct: 472 GRLGHGDKEARLVPTYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGN--P 529

Query: 379 QAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           QA+  VP  +E  ++++   + ++CGA H AVLT   +V +WG    G+LG GD+ DRN 
Sbjct: 530 QADGKVPTRVEGKLMKN-FVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 588

Query: 438 PSLV 441
           PS+V
Sbjct: 589 PSIV 592



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 41/229 (17%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEG 242
           GD     +P  V    G++  +VA G  HT  + ++            G+++ WG G +G
Sbjct: 413 GDRSSVSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKG 472

Query: 243 QLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           +LG G +  ++VPT ++   +E +                           ++ACG   +
Sbjct: 473 RLGHGDKEARLVPT-YVATLVEPSFC-------------------------QVACGHSLT 506

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
             +T +G + T G  +YGQ G+   + ++       LM   VE++A G +H   ++    
Sbjct: 507 VALTTSGQVYTMGSPVYGQLGNPQADGKVPTRVEGKLMKNFVEELACGAYHVAVLTSRTE 566

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           VY +G    G+LG G     N P ++E   L+ K+ K + CG   +A +
Sbjct: 567 VYTWGKGANGRLGHGDTDDRNFPSIVEA--LKDKQVKGIICGTSFTAAI 613



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D   P    S + + V+ IA G  H   ++ +G V+ +G    G+LG GVD   + PK +
Sbjct: 258 DSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFV 317

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPSLV--PI 443
           +   L++   ++V+CG   S  +T  G +  WG N Y  G LG G    + +P  +  P+
Sbjct: 318 DG--LKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPL 375

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G    +++CG WHT ++    Q+
Sbjct: 376 EGIHVSSVSCGPWHTAVVTSAGQL 399


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 111/225 (49%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L+P LV+ N   K +T+VA G  HT+ L+  G+V+ WGY   GQ+G GS     PTP  +
Sbjct: 125 LTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ-PTPRRV 183

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 184 SSCLQNKV------------------------VVNIACGQLCSMAVLDNGEIYGWGYNCN 219

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G+  +Q  P   ++L  + + Q+A G  HT+ ++ EG VY +G N +GQLGTG  
Sbjct: 220 GQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNK 279

Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
             + +P    TPI   K    +V +C   H SA  T+ GQVL WG
Sbjct: 280 SNQALP----TPINTDKERIVEVAACHTSHTSAAKTQSGQVLMWG 320



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 128/267 (47%), Gaps = 32/267 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  + +  G KI  ++ G G H +I +  G+V+ WG+ G  QLG G+     
Sbjct: 66  GDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGT----- 120

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L P L                 V+++  + R  V E+ACG  H+  +T  G +  
Sbjct: 121 -TNHGLTPAL-----------------VSTNLLSKR--VTEVACGSHHTIALTTDGEVYA 160

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   SS L +  V  IA G   ++ +   G +Y +G N  G
Sbjct: 161 WGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNG 220

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G +  +  P       L+      V+CG  H+  LT++G V +WG N YGQLG G+
Sbjct: 221 QLGLGNNGNQQTP--CRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGN 278

Query: 432 SIDRNIPSLVPIHGFLPRNIACGWWHT 458
             ++ +P+  PI+    R +     HT
Sbjct: 279 KSNQALPT--PINTDKERIVEVAACHT 303



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 95/168 (56%), Gaps = 3/168 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H  + T  G +  +G   Y Q G+G+TN  L P+  S+ L+  +V ++A G  HT+ +
Sbjct: 93  GPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIAL 152

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G VY +G N  GQ+G+G    +  P+ + +  L++K    ++CG   S  + ++G++
Sbjct: 153 TTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSS-CLQNKVVVNIACGQLCSMAVLDNGEI 211

Query: 417 LSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAE 463
             WG+N  GQLGLG++ ++  P  +  + G     +ACG+ HTL L +
Sbjct: 212 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTD 259



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVCISVEGRV 362
           VT    +   G    G  G G     + P     L   ++  ++ G   H V  + +G V
Sbjct: 46  VTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEV 105

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           Y +G N + QLG G       P L+ T +L SKR   V+CG+ H+  LT DG+V +WG+N
Sbjct: 106 YAWGHNGYSQLGNGTTNHGLTPALVSTNLL-SKRVTEVACGSHHTIALTTDGEVYAWGYN 164

Query: 423 KYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
             GQ+G G + ++  P  V   +   +  NIACG   ++ + +  +I
Sbjct: 165 NSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEI 211



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 22/173 (12%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           VY WGY   G     S    P P R+      K V    CG   ++A  ++G++  WG  
Sbjct: 158 VYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGY- 216

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           +  GQ  L +  + +TP         ++V+ A G+AH +++T+ G VY WG         
Sbjct: 217 NCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWG--------- 267

Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
                  A S+ +  TG +S  ALPT      ++           TS+A+ +S
Sbjct: 268 -------ANSYGQLGTGNKSNQALPTPINTDKERIVEVAACHTSHTSAAKTQS 313


>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1096

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 194/459 (42%), Gaps = 67/459 (14%)

Query: 40  SPIPARLCGGDSWK----DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
           +P+PAR+     W+       G G   +LA    G + +WG A+  GQ  L  G      
Sbjct: 87  NPMPARV-----WRLFSITAIGAGELHSLALKSDGTVWSWG-ANTNGQ--LGDGTLISRS 138

Query: 96  EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
            P P+P   +VV  AAG++H + +   G V+ WG               +AG    D T 
Sbjct: 139 VPAPVPGLTNVVAIAAGFSHSMVLKADGTVWAWG-------------LNAAGQL-GDGTP 184

Query: 156 KQSALPTEQAPPSDKR--AGEEVVKRRKTSSAREESENPASGDEFFT---LSPCLVTLNP 210
            +   P +    +  +  A   V     T+  R  +       +  T   +        P
Sbjct: 185 TRRLTPVQVLGLTGVKDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGDLVGRSTAAALP 244

Query: 211 GVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS-- 267
           G+  +  ++ GG H+LIL   G VW WG    GQLGLGS +   PTP  +P L    +  
Sbjct: 245 GMTGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVS-TPTPTQVPGLTEMVAVT 303

Query: 268 --GKDRPLLVRQGSVNSSGKAGR--------------------SYVKEIACGG-RHSAVV 304
             G+    L   G+V + G   R                    + VK +A GG  HS  V
Sbjct: 304 GGGQHSVALRVDGTVWAWGSNARAQLGDGTQTQRLSPCQVTGLTQVKGVAAGGGLHSVAV 363

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
              G +  +G    GQ G G+   +L P+ A  L  ++   ++AG  HT+ +  +G  + 
Sbjct: 364 KGNGEVWAWGSNSEGQVGDGTYLMKLVPTTARVL--VERADVSAGGGHTLALKPDGTAWG 421

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G N   QLG G   A  +P      +L   R   VS G  HS  L EDG V  WG N +
Sbjct: 422 WGLNAQSQLGDGTTTARPLP----VQVLNLTRVAAVSAGTYHSLALKEDGTVWGWGANYW 477

Query: 425 GQLGLGDSIDRNIPSLVPIHGFL-PRNIACGWWHTLLLA 462
           G +G G +++R+ P  V + G L    +A G +H+L L+
Sbjct: 478 GAIGDGTALNRSQP--VKVSGTLVAMTVASGNFHSLALS 514



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 164/407 (40%), Gaps = 61/407 (14%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPLPTEASVVKAAAGWAHCVSVTE 121
           +LA S  G +  WG   D     L  G    T   PF +P    VV  AAG  H +++  
Sbjct: 510 SLALSVDGSVWAWG---DNSLGQLGDGTVTPTRNAPFRVPNLEGVVSLAAGGEHSLALKA 566

Query: 122 AGEVYTWGWRE-CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
            G V+ WG ++ C     V R              +Q    T+       R    V++  
Sbjct: 567 DGTVWVWGRQDTCADPENVGRVL---------RVPEQVQGLTDAVAVRAGRCHSVVLRAD 617

Query: 181 KTSSAREESENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
            T  A   +      D  FT  ++P  V    GV     + G   TL L   G  W WG 
Sbjct: 618 GTLWAWGRNAEGQLADGTFTDRMTPARVDGLTGV--ISFSVGSEQTLALKADGTAWAWGP 675

Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
             +GQLG G  +     P  +P L                            V+ +A G 
Sbjct: 676 NAQGQLGGGLSVPRT-RPTQVPTLTD--------------------------VRTVAMGA 708

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVC 355
            H+ V+ D   L  +G    GQ G G+ + Q   +R   A+S        +AA   +++ 
Sbjct: 709 VHALVLKDDLTLWAWGSNAEGQVGDGALDWQAAPVRSGLAAS------RGLAAATQYSLG 762

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           I+++G V   G N  GQLG G       P+    P++     + ++ GA H   L  DG+
Sbjct: 763 IALDGSVQSTGANASGQLGDGT----LFPRAEPVPVIGLSECRAIAGGATHGLALKTDGR 818

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLL 461
           VLSWG N  G+LG G ++ R  P++V P+ G L  +IA G  H+L L
Sbjct: 819 VLSWGANAEGELGDGTTVARRAPAVVGPLAGVL--SIAVGARHSLAL 863



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 145/364 (39%), Gaps = 44/364 (12%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           GG   +L     G + +WG  +D GQ  L  G    TP P  +P    +V    G  H V
Sbjct: 254 GGGSHSLILKMDGSVWSWGK-NDAGQ--LGLGSVVSTPTPTQVPGLTEMVAVTGGGQHSV 310

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
           ++   G V+ WG       +      G     Q+ S  + + L   +   +        V
Sbjct: 311 ALRVDGTVWAWG-------SNARAQLGDGTQTQRLSPCQVTGLTQVKGVAAGGGLHSVAV 363

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
           K      A   +     GD  + +     T    V+   V+AGG HTL L   G  WGWG
Sbjct: 364 KGNGEVWAWGSNSEGQVGDGTYLMKLVPTTARVLVERADVSAGGGHTLALKPDGTAWGWG 423

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
              + QLG G+                      RPL V+  ++        + V  ++ G
Sbjct: 424 LNAQSQLGDGTTTA-------------------RPLPVQVLNL--------TRVAAVSAG 456

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
             HS  + + G +  +G   +G  G G+  ++ +P   S  +      +A+G +H++ +S
Sbjct: 457 TYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQPVKVSGTL--VAMTVASGNFHSLALS 514

Query: 358 VEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           V+G V+ +G N  GQLG G V    N P     P LE   +  ++ G  HS  L  DG V
Sbjct: 515 VDGSVWAWGDNSLGQLGDGTVTPTRNAP--FRVPNLEGVVS--LAAGGEHSLALKADGTV 570

Query: 417 LSWG 420
             WG
Sbjct: 571 WVWG 574



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 99/227 (43%), Gaps = 33/227 (14%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            V AG  H+L+L   G VW WG    GQLG GS                    +  P+  
Sbjct: 51  SVLAGRHHSLVLKADGTVWSWGGNNYGQLGTGST-------------------RQNPMPA 91

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
           R   + S        +  I  G  HS  +   G + ++G    GQ G G+   +  P+  
Sbjct: 92  RVWRLFS--------ITAIGAGELHSLALKSDGTVWSWGANTNGQLGDGTLISRSVPAPV 143

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
             L +  V  IAAG  H++ +  +G V+ +G N  GQLG G        +L    +L   
Sbjct: 144 PGLTN--VVAIAAGFSHSMVLKADGTVWAWGLNAAGQLGDGTP----TRRLTPVQVLGLT 197

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
             K ++ G  HS  LT DG++ +WG N  GQLG GD + R+  + +P
Sbjct: 198 GVKDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGDLVGRSTAAALP 244



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 116/263 (44%), Gaps = 30/263 (11%)

Query: 202  SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---SRIKMVPTPHL 258
            +P +V   P   +  +A G RH+L L   G V  WG   +GQLG G   SR+  V    L
Sbjct: 840  APAVV--GPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVRVQGL 897

Query: 259  IPCLEHAASGKDRPLLVRQGSV-----NSSGKAG-----RSYV----------KEIACGG 298
                  AA       L   G+V     N+ G+ G     RS V            +A G 
Sbjct: 898  TGVAAIAAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLRSLVPVRTQALTGVTAVAAGR 957

Query: 299  RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
             HS  +   G L  +G   YG+ G G+   +L P   +SL    V  + AG  H++ ++ 
Sbjct: 958  NHSLALKGDGTLWAWGSNTYGELGDGTQARKLAPVQVTSLTG--VSALDAGDHHSLAVTS 1015

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
             G+V+ +G NQFGQ+G GV   ++  +LL   +     A  V+ G  HS  L  D  V +
Sbjct: 1016 GGKVWGWGRNQFGQVGKGV---KSNWQLLPAQVPGLTSAVAVAGGGEHSLALLSDRSVWA 1072

Query: 419  WGWNKYGQLGLGDSIDRNIPSLV 441
            WG    GQLG G S  R  P  V
Sbjct: 1073 WGHGDMGQLGTGMSNLRLSPVQV 1095



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 82/176 (46%), Gaps = 9/176 (5%)

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
           G S    +  G  HS V+   G + ++G   YGQ G GST     P+    L  I    I
Sbjct: 45  GTSRQGSVLAGRHHSLVLKADGTVWSWGGNNYGQLGTGSTRQNPMPARVWRLFSITA--I 102

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
            AG  H++ +  +G V+ +G N  GQLG G   + +VP     P+        ++ G  H
Sbjct: 103 GAGELHSLALKSDGTVWSWGANTNGQLGDGTLISRSVPA----PVPGLTNVVAIAAGFSH 158

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL-PRNIACGWWHTLLL 461
           S VL  DG V +WG N  GQLG G    R  P  V + G    ++IA G  H+L L
Sbjct: 159 SMVLKADGTVWAWGLNAAGQLGDGTPTRRLTP--VQVLGLTGVKDIAAGNVHSLAL 212



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 96/225 (42%), Gaps = 33/225 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G  H L L   G+V  WG   EG+LG G+ +     P ++  L              
Sbjct: 803 IAGGATHGLALKTDGRVLSWGANAEGELGDGTTVAR-RAPAVVGPL-------------- 847

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                       + V  IA G RHS  +   G++  +G  + GQ G G+T  ++ P    
Sbjct: 848 ------------AGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVRVQ 895

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
            L    V  IAAG   ++ +  +G V+ +GGN  GQLG        VP  + T  L    
Sbjct: 896 GLTG--VAAIAAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLRSLVP--VRTQALTGVT 951

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           A  V+ G  HS  L  DG + +WG N YG+LG G    +  P  V
Sbjct: 952 A--VAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQARKLAPVQV 994



 Score = 44.7 bits (104), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 28/138 (20%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
            G +   L+P  VT   GV  + + AG  H+L ++  G+VWGWG    GQ+G G +     
Sbjct: 983  GTQARKLAPVQVTSLTGV--SALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQL 1040

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
             P  +P L  A +                          +A GG HS  +    ++  +G
Sbjct: 1041 LPAQVPGLTSAVA--------------------------VAGGGEHSLALLSDRSVWAWG 1074

Query: 315  WGLYGQCGHGSTNDQLRP 332
             G  GQ G G +N +L P
Sbjct: 1075 HGDMGQLGTGMSNLRLSP 1092


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 131/273 (47%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL P LV       I K+AA   G+H L LS   +++ WG G  G+LG G  + +   P 
Sbjct: 481 TLGPQLVQGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSL-EEPK 539

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           L+  L                    SGK     V  IACG  +SA +T  G L T+G G 
Sbjct: 540 LVSAL--------------------SGKQTGKQVIHIACGSTYSAAITADGELYTWGRGN 579

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           YG+ GHGS+ DQ  P   + L  ++V  ++  +G   T+ ++  G+V+ +G   +G+LG 
Sbjct: 580 YGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGR 639

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  +T+DGQV SWG     +LG G     
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHV 697

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P ++  + G    ++A G  H L L E+ ++
Sbjct: 698 RYPKIMNGLQGKKVVDVAVGSTHCLALTESGEV 730



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 111/218 (50%), Gaps = 29/218 (13%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                  
Sbjct: 3048 NYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3091

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    
Sbjct: 3092 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT 3142

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
            QL+P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+P+ 
Sbjct: 3143 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3202

Query: 387  LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            +E   L  +    + CGA+ S  LT+ G V +W   K+
Sbjct: 3203 IER--LNGQAVCQIECGAQFSLALTKSGVVWTWXXTKH 3238



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 27/257 (10%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L +      
Sbjct: 2995 ALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSN------ 3048

Query: 271  RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
               +V++ +V+S              GGRH+  +T  G + ++G G  G+ GH S  +  
Sbjct: 3049 --YVVKKVAVHS--------------GGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCD 3092

Query: 331  RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            +P    +L   ++  IA G  H+  I+  G +Y +G  ++G+LG G +  +  PK+++  
Sbjct: 3093 KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-- 3150

Query: 391  ILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
            +L   R   V+CG+R   +  LT++G V SWG   +G+LG G S   NIP  +  ++G  
Sbjct: 3151 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQA 3210

Query: 448  PRNIACGWWHTLLLAET 464
               I CG   +L L ++
Sbjct: 3211 VCQIECGAQFSLALTKS 3227



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 144/356 (40%), Gaps = 83/356 (23%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG  E                      G  +  P ++  
Sbjct: 4055 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGNRSPCDRPR 4096

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
              +   G EVV     ++    S    +  E +T                 L P LV   
Sbjct: 4097 VIESLRGTEVVD---IAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEAL 4153

Query: 210  PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
             G ++  +A  +G   TL L+D   VW WG G  G+LG G                  + 
Sbjct: 4154 QGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSD 4196

Query: 268  GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
            G   P+      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +
Sbjct: 4197 GCKVPM-----KIDSLTGVG---VTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4248

Query: 328  DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
               RP     L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+
Sbjct: 4249 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4308

Query: 388  ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
                L+ K+   V+CG+ H+         L+W  +K    G        +PS VP+
Sbjct: 4309 AA--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLPSQVPM 4346



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4016

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 4017 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4076

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL   +V  IAAG  H+ CI+  G +Y +G  ++G+L
Sbjct: 4077 GEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRL 4136

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G G  + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4137 GHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4194

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4195 SDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKS 4228



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2997

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G +   G    G+ G G ++  +  P   ++L +  V+++A 
Sbjct: 2998 -VVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 3057 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3114

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA +T  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174

Query: 466  Q 466
            +
Sbjct: 3175 E 3175



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 29/207 (14%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P LVT   G+K+  V+  +G   TL +++ GQVW WG G  G+LG G       TP LI 
Sbjct: 594 PMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           + ++ CG + S  +T  G + ++G G   +
Sbjct: 653 KLQDLD------------------------IVKVRCGSQFSIAITKDGQVYSWGKGDNQR 688

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+      P   + L   +V  +A G  H + ++  G VY +G N   Q    +  A
Sbjct: 689 LGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTLRIA 748

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
           + VP +L  P L+SK    +SCG   S
Sbjct: 749 KPVPSVL--PGLDSKHIVGISCGPAQS 773



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 143/383 (37%), Gaps = 76/383 (19%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 3002 AGGSKSLFAVTAEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3053

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H  ++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 3054 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P    Q 
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIP----QN 3202

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
                +G+A    V +I CG + S  +T +G + T+    +         + L   +   L
Sbjct: 3203 IERLNGQA----VCQIECGAQFSLALTKSGVVWTWXXTKHCLAVXFYYXNYLLELF---L 3255

Query: 339  MDIQVEQIAAGLWHTVC----------ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            + + V  +  G +   C          I +  +VY +G N  GQ G G       P L+ 
Sbjct: 3256 IKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGNGTTTVNRKPTLVH 3315

Query: 389  TPILESKRAKVVSCGARHSAVLT 411
               LE ++   V+CG+ HS   T
Sbjct: 3316 G--LEGQKITRVACGSSHSVAWT 3336



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           D+    CG  F++A ++ G++ +WG  D++   + T  +H   P+         VV  A 
Sbjct: 658 DIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTE-EHVRYPKIMNGLQGKKVVDVAV 716

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE+GEVY+WG
Sbjct: 717 GSTHCLALTESGEVYSWG 734



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 38/236 (16%)

Query: 46  LCGGDSWKDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGE 93
           L G  + K V    CG  ++ A +  G+L TWG          S++D+    L +G  G 
Sbjct: 544 LSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKG- 602

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
                    +   V   +G A  +SVTE G+V++WG            D+G  G    D 
Sbjct: 603 --------LKVVDVSCGSGDAQTLSVTENGQVWSWG----------DGDYGKLGRGGSDG 644

Query: 154 TGKQSALPTEQAPPSDK-RAGEE----VVKRRKTSS-AREESENPASGDEFFTLSPCLVT 207
                 +   Q     K R G +    + K  +  S  + +++    G E     P ++ 
Sbjct: 645 CKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMN 704

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
              G K+  VA G  H L L++ G+V+ WG   + Q     RI   P P ++P L+
Sbjct: 705 GLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTLRIAK-PVPSVLPGLD 759



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4218 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4276

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4277 CTEDGEVYTWG 4287



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 4054 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGTE 4105

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   +T AGE+YTWG
Sbjct: 4106 VVDIAAGGAHSACITAAGELYTWG 4129



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 4/95 (4%)

Query: 41   PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
            PIP ++    ++   K     G   A A +  GK+ +WG  DD G+    S  + + P  
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3096

Query: 98   FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
                    +   A G +H  ++T +GE+YTWG  E
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 115/248 (46%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG G   D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 159/379 (41%), Gaps = 79/379 (20%)

Query: 25  WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
           WGY     PG S     I++ P   R     S K+V CGG     L   E G++ T G  
Sbjct: 4   WGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           + +GQ  L   + G  PE      +  +V  A G +H +++++ G++++WG         
Sbjct: 61  NSKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA-------- 110

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
                GS G     +T    A+P        ++  ++ +   + S         A+  +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158

Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
           FT                   SP  V    G+ + +VAAGG H+  LS  G V+GWG   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
            GQLGL                      KDR  P  V+              V  I+CG 
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-IS 357
            H+AV+T +G + TFG G  GQ GHGS ND++ P     LM  +V QIA G  HT+  + 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP 311

Query: 358 VEGRVYVFGGNQFGQLGTG 376
             G +Y FG    GQLGTG
Sbjct: 312 SSGLIYAFGCGARGQLGTG 330



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +KE+ACGG HS  + + G + T G    GQ GH    +  +P    +L D  +  +A G 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+++ +G    GQLG    + +  VP+L++   L  +    VSCG  H   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK--LNQQTILQVSCGNWHCLA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
           L  DGQ  +WG N +GQLGLG     +  P  V  + G     +A G  H+  L+
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 12/160 (7%)

Query: 315 WGLYGQCGHGSTNDQLR-----PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           WG Y   G    +  LR     P     + D  ++++A G  H+V +  +G VY  G N 
Sbjct: 4   WG-YWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNS 62

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQLGL
Sbjct: 63  KGQLGH--EREGNKPE--QIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118

Query: 430 GDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
             + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|328872836|gb|EGG21203.1| hypothetical protein DFA_01078 [Dictyostelium fasciculatum]
          Length = 413

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 157/358 (43%), Gaps = 78/358 (21%)

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
           G  H + +   GE+YTWGW                 SF                      
Sbjct: 120 GHYHSMIINNKGELYTWGWS----------------SF---------------------- 141

Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
           AG E  K  K ++  E S  P   DE+   +  ++       + KVAAG  H+L L   G
Sbjct: 142 AGGE--KENKETNYNEWS--PRLVDEYVLDNDSIL---QSRDVVKVAAGWGHSLALDSEG 194

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
            +WGWG+  EGQL +       PT H              P+L R   V SS  +    V
Sbjct: 195 SIWGWGWNAEGQLFVD------PTRH--------------PVLHRPTKVFSSTSSSSLVV 234

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           ++I CG  +SA +TD G +   G G +GQ G G+T     P     L   +++++A G  
Sbjct: 235 RDIICGSDYSAFITDKGHVYMVGSGEHGQLGRGNTEASAYPQIVQGLQGQRIDKVACGFG 294

Query: 352 HTVCIS-VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           H++ +   +G+++  G N  GQLG G    + + +L+ TP+    R  ++  G  HSA +
Sbjct: 295 HSLLLDEQQGQLFSLGWNGNGQLGVG----DTLNRLVATPVSMPDRVVLIGAGRAHSAAV 350

Query: 411 TEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFL-------PRNIACGWWHTLL 460
             +GQ  +WG  + G+LG G+ +    IP+ +  +          P +++CG+ HTL+
Sbjct: 351 LANGQFYTWGCARKGKLGSGNINGMETIPTQITEYDDTDDWPSKRPIDLSCGFDHTLV 408



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 15/188 (7%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTN---------DQLRPSYASSLM 339
           +K + CG  HS ++ + G L T+GW  +  G+  +  TN         D+      S L 
Sbjct: 114 IKSLHCGHYHSMIINNKGELYTWGWSSFAGGEKENKETNYNEWSPRLVDEYVLDNDSILQ 173

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ---AENVPKLLETPILESKR 396
              V ++AAG  H++ +  EG ++ +G N  GQL     +        K+  +    S  
Sbjct: 174 SRDVVKVAAGWGHSLALDSEGSIWGWGWNAEGQLFVDPTRHPVLHRPTKVFSSTSSSSLV 233

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW 455
            + + CG+ +SA +T+ G V   G  ++GQLG G++     P +V  + G     +ACG+
Sbjct: 234 VRDIICGSDYSAFITDKGHVYMVGSGEHGQLGRGNTEASAYPQIVQGLQGQRIDKVACGF 293

Query: 456 WHTLLLAE 463
            H+LLL E
Sbjct: 294 GHSLLLDE 301


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 138/302 (45%), Gaps = 57/302 (18%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL--IPCLE------H 264
           +I ++ AG  HT++L+  G+V+  GY   GQ G G   ++    HL  IP ++      H
Sbjct: 407 EIIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTARV---SHLSEIPKMDSGSSQAH 463

Query: 265 AASGKDRPLLVR-QGSVNSSGKAGR----------------------SYVKEIACGGRHS 301
           A +G +  +LV   G V + G   R                        V+ ++C   H+
Sbjct: 464 AYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHT 523

Query: 302 AVVTDAGAL---LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            +  + G L    TFG   YGQ GH  + D+  P +  +L D Q+  +A G +HT+ ++V
Sbjct: 524 VLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTV 583

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---LESKRAKVVSCGARHSAVLTEDGQ 415
            G+ + FG N +GQL  G+D  EN  +L    +   LE +    + CG  H+  L     
Sbjct: 584 SGKAFAFGKNDYGQL--GIDTMEN--QLAPVQVRGGLERQECLEIRCGYYHTIALCSGAH 639

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV-------------PIHGFLPRNIACGWWHTLLLA 462
           + ++G N YGQLGLG S   +  +L               + G     IACG +HT+ ++
Sbjct: 640 LFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVS 699

Query: 463 ET 464
           + 
Sbjct: 700 DN 701



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 48/287 (16%)

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------AASGKDRPL 273
           G  HT+++S  G+V   GY   GQLG G+       P +I  LE+      + S     L
Sbjct: 467 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSE-SVPKIIRSLENKIVRLVSCSYYHTVL 525

Query: 274 LVRQGSVNSSGKAGRS-------------------------YVKEIACGGRHSAVVTDAG 308
               G++ +    GR+                          +  +ACG  H+ VVT +G
Sbjct: 526 ACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSG 585

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGG 367
               FG   YGQ G  +  +QL P      ++ Q   +I  G +HT+ +     ++ FG 
Sbjct: 586 KAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGR 645

Query: 368 NQFGQLGTGVDQAENVPKL-LE---------TPILESKRAKVVSCGARHSAVLTEDGQVL 417
           N +GQLG G   A +   L L+            LE K    ++CG  H+  ++++G + 
Sbjct: 646 NDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMY 705

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLLL 461
            +G N +GQLG GD+ +R  P   PI  F+ + I   A G++HT++L
Sbjct: 706 VFGRNNHGQLGTGDTTERVYP--FPIDDFVGKRIALVAAGFYHTVVL 750



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 96/213 (45%), Gaps = 42/213 (19%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           +I  VA G  HT++++  G+ + +G    GQLG             I  +E+  +    P
Sbjct: 567 QIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLG-------------IDTMENQLA----P 609

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN----- 327
           + VR       G   R    EI CG  H+  +     L  FG   YGQ G G +N     
Sbjct: 610 VQVR-------GGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTS 662

Query: 328 ----DQLRPSYASSLMDIQ---VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
                Q R S A  + +++   + +IA G +HT+ +S  G +YVFG N  GQLGTG D  
Sbjct: 663 NLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTG-DTT 721

Query: 381 ENVPKLLETPI--LESKRAKVVSCGARHSAVLT 411
           E V      PI     KR  +V+ G  H+ VLT
Sbjct: 722 ERVYPF---PIDDFVGKRIALVAAGFYHTVVLT 751



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 4/152 (2%)

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G   YG+ GHG T  +       +L   ++ QI AG  HTV ++ +G+V+  G N  GQ 
Sbjct: 379 GQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQC 438

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSC-GARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           G G      V  L E P ++S  ++  +  G  H+ +++ DG+V + G+N  GQLG G++
Sbjct: 439 GQG--GTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNT 496

Query: 433 IDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
              ++P ++  +   + R ++C ++HT+L  E
Sbjct: 497 TSESVPKIIRSLENKIVRLVSCSYYHTVLACE 528


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 38/262 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ I K+A G  HT I+S  GQ++ +G G  G LG G  + +                  
Sbjct: 321 GISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDTLTVA----------------- 363

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD----------AGALLTFGWGLYGQ 320
           RP  V       S K  R+  K IACG  H+A + +          +G L T+G    G+
Sbjct: 364 RPKQVE------SLKGVRA--KAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGK 415

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GH     +L P+    L D    Q++     T+ +++ G V+  G  + G+LG  + + 
Sbjct: 416 LGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSED 475

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
            ++  L+E P L+++  + +S G+ H AVLT +G+V +WG    GQLGLGD +DR+ P+L
Sbjct: 476 TSIC-LIEGP-LKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTL 533

Query: 441 V-PIHGFLPRNIACGWWHTLLL 461
           V  +      +IACG+  T+ +
Sbjct: 534 VEALEDKQVHSIACGFNFTMAI 555



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ +ACG +H+A+VT  G + ++G    G+ GH  +     P    SL   +V+ IA G 
Sbjct: 217 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGA 276

Query: 351 WHTVCISVEGRVYVF--GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            HT  +S+ G +Y +  G +  G  G    +++  P  L  P L+      ++CG  H+A
Sbjct: 277 KHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGP-LDGISILKIACGHWHTA 335

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           +++  GQ+ ++G   +G LG GD++    P  V  + G   + IACG WHT  + E
Sbjct: 336 IISSAGQIFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVE 391



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 8/141 (5%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P   ++   I V+ +A G  H   ++ +G V+ +G +  G+LG  V  + + PK++E+  
Sbjct: 206 PRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIES-- 263

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRN--IPSLV--PIHGF 446
           L S R K ++ GA+H+  ++  G++  WG   +  LGL GD   R+   P  +  P+ G 
Sbjct: 264 LASTRVKAIAFGAKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGI 322

Query: 447 LPRNIACGWWHTLLLAETTQI 467
               IACG WHT +++   QI
Sbjct: 323 SILKIACGHWHTAIISSAGQI 343


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 123/244 (50%), Gaps = 34/244 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G ++ WG    GQLGLG            
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLG------------ 226

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               H  S KD P L+ +G  N         V+ +ACGG HSA++T  G L TFG G +G
Sbjct: 227 ----HTES-KDDPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 273

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L+  +V QIA G WHT+  +S  G+V+ FG  + GQLG G  
Sbjct: 274 QLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRN 436
           + + +P  L   +  S+  K+ S  +    ++   G   +L W   +   + L     R 
Sbjct: 334 RDQLMP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRT 387

Query: 437 IPSL 440
           IP+L
Sbjct: 388 IPTL 391



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 40/260 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  + L   +KI  V  G  H LILS  G+ + +       L   S ++          
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQ---------- 136

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                                        + +I CG  HS  ++  G L  +G  L+GQ 
Sbjct: 137 --------------------------EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQL 170

Query: 322 GHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
           G G        P     L  + + QI+AG  H++ +S+ G +Y +G N+ GQLG G  ++
Sbjct: 171 GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTES 230

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           ++ P L+E   L++++ + V+CG  HSA+LT+DG + ++G  K+GQLG   + +   P L
Sbjct: 231 KDDPSLIEG--LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCL 288

Query: 441 VP-IHGFLPRNIACGWWHTL 459
           V  + G+    IACG WHTL
Sbjct: 289 VAELVGYRVTQIACGRWHTL 308



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 12/136 (8%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE---- 388
           + S L + ++ QI  G +H++ +S  G ++ +G N  GQLG G    +   P+++E    
Sbjct: 131 FESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAG 190

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
            P+ +      +S G  HS  L+  G + SWG N+ GQLGLG +  ++ PSL+  +    
Sbjct: 191 VPLAQ------ISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQK 244

Query: 448 PRNIACGWWHTLLLAE 463
              +ACG  H+ LL +
Sbjct: 245 VEFVACGGSHSALLTQ 260



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 40/270 (14%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           E  +++   G  H +++++ GE++ WG +       V R F S  + Q       + +P 
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
            Q    +  +    +     S  + E      G       P L+      K+  VA GG 
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           H+ +L+  G ++ +G G  GQLG  S         L PCL     G              
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVGYR------------ 296

Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLR--PSYASSLM 339
                   V +IACG  H+ A V+D G + +FG G  GQ G+G T DQL   P   SS  
Sbjct: 297 --------VTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSE 348

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           ++++E       HT   S +  + + GGNQ
Sbjct: 349 ELKLES------HT---SEKELIMIAGGNQ 369


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 123/244 (50%), Gaps = 34/244 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G ++ WG    GQLGLG            
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLG------------ 226

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               H  S KD P L+ +G  N         V+ +ACGG HSA++T  G L TFG G +G
Sbjct: 227 ----HTES-KDDPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 273

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L+  +V QIA G WHT+  +S  G+V+ FG  + GQLG G  
Sbjct: 274 QLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRN 436
           + + +P  L   +  S+  K+ S  +    ++   G   +L W   +   + L     R 
Sbjct: 334 RDQLMP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRT 387

Query: 437 IPSL 440
           IP+L
Sbjct: 388 IPTL 391



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 40/260 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  + L   +KI  V  G  H LILS  G+ + +       L   S ++          
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQ---------- 136

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                                        + +I CG  HS  ++  G L  +G  L+GQ 
Sbjct: 137 --------------------------EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQL 170

Query: 322 GHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
           G G        P     L  + + QI+AG  H++ +S+ G +Y +G N+ GQLG G  ++
Sbjct: 171 GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTES 230

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           ++ P L+E   L++++ + V+CG  HSA+LT+DG + ++G  K+GQLG   + +   P L
Sbjct: 231 KDDPSLIEG--LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCL 288

Query: 441 VP-IHGFLPRNIACGWWHTL 459
           V  + G+    IACG WHTL
Sbjct: 289 VAELVGYRVTQIACGRWHTL 308



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 12/136 (8%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE---- 388
           + S L + ++ QI  G +H++ +S  G ++ +G N  GQLG G    +   P+++E    
Sbjct: 131 FESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAG 190

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
            P+ +      +S G  HS  L+  G + SWG N+ GQLGLG +  ++ PSL+  +    
Sbjct: 191 VPLAQ------ISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQK 244

Query: 448 PRNIACGWWHTLLLAE 463
              +ACG  H+ LL +
Sbjct: 245 VEFVACGGSHSALLTQ 260



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 40/270 (14%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           E  +++   G  H +++++ GE++ WG +       V R F S  + Q       + +P 
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
            Q    +  +    +     S  + E      G       P L+      K+  VA GG 
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           H+ +L+  G ++ +G G  GQLG  S         L PCL     G              
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVGYR------------ 296

Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLR--PSYASSLM 339
                   V +IACG  H+ A V+D G + +FG G  GQ G+G T DQL   P   SS  
Sbjct: 297 --------VTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSE 348

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           ++++E       HT   S +  + + GGNQ
Sbjct: 349 ELKLES------HT---SEKELIMIAGGNQ 369


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 123/244 (50%), Gaps = 34/244 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G ++ WG    GQLGLG            
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLG------------ 226

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               H  S KD P L+ +G  N         V+ +ACGG HSA++T  G L TFG G +G
Sbjct: 227 ----HTES-KDDPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 273

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L+  +V QIA G WHT+  +S  G+V+ FG  + GQLG G  
Sbjct: 274 QLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRN 436
           + + +P  L   +  S+  K+ S  +    ++   G   +L W   +   + L     R 
Sbjct: 334 RDQLMP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRT 387

Query: 437 IPSL 440
           IP+L
Sbjct: 388 IPTL 391



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 40/260 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  + L   +KI  V  G  H LILS  G+ + +       L   S ++          
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQ---------- 136

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                                        + +I CG  HS  ++  G L  +G  L+GQ 
Sbjct: 137 --------------------------EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQL 170

Query: 322 GHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
           G G        P     L  + + QI+AG  H++ +S+ G +Y +G N+ GQLG G  ++
Sbjct: 171 GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTES 230

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           ++ P L+E   L++++ + V+CG  HSA+LT+DG + ++G  K+GQLG   + +   P L
Sbjct: 231 KDDPSLIEG--LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCL 288

Query: 441 VP-IHGFLPRNIACGWWHTL 459
           V  + G+    IACG WHTL
Sbjct: 289 VAELVGYRVTQIACGRWHTL 308



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 12/136 (8%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE---- 388
           + S L + ++ QI  G +H++ +S  G ++ +G N  GQLG G    +   P+++E    
Sbjct: 131 FESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAG 190

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
            P+ +      +S G  HS  L+  G + SWG N+ GQLGLG +  ++ PSL+  +    
Sbjct: 191 VPLAQ------ISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQK 244

Query: 448 PRNIACGWWHTLLLAE 463
              +ACG  H+ LL +
Sbjct: 245 VEFVACGGSHSALLTQ 260



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 40/270 (14%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           E  +++   G  H +++++ GE++ WG +       V R F S  + Q       + +P 
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
            Q    +  +    +     S  + E      G       P L+      K+  VA GG 
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           H+ +L+  G ++ +G G  GQLG  S         L PCL     G              
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVG-------------- 294

Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLR--PSYASSLM 339
                   V +IACG  H+ A V+D G + +FG G  GQ G+G T DQL   P   SS  
Sbjct: 295 ------YRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSE 348

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           ++++E       HT   S +  + + GGNQ
Sbjct: 349 ELKLES------HT---SEKELIMIAGGNQ 369


>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
           davidii]
          Length = 1369

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 141/296 (47%), Gaps = 47/296 (15%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
           C+  L P  K+  VA G  HTL+ ++ G+V+  G   EGQLGLG   +   T HLI    
Sbjct: 74  CVKALKPE-KVKHVACGRNHTLVSTEGGKVYAVGGNNEGQLGLGD-TEDRNTFHLIEFFT 131

Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
                 + +A       L   G +     NS G+ G + V                 I+C
Sbjct: 132 SQHQFKQLSAGSNTSAALTEDGKLFMWGENSEGQIGLNNVCNVYFPHEVTVGKPIAWISC 191

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCG------HGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           G  HSA VT  G L TFG   +G+ G            QL P     ++     Q+A G 
Sbjct: 192 GYYHSAFVTMEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEKVI-----QVACGG 246

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAV 409
            HTV ++ E  VY FG  QFGQLG G    E   PK++E+  ++  +   +SCG  H+A+
Sbjct: 247 GHTVVLT-EKAVYNFGLGQFGQLGLGTFVFETTEPKIMES--VKDHKITYISCGENHTAL 303

Query: 410 LTEDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           +T+ G++ ++G  +YG+LGLG  +  ++ +P+L P    F    +ACG  H ++ A
Sbjct: 304 ITDIGRMYTFGDGRYGKLGLGMENFTNQFVPTLCPNFLRFKVHLVACGGCHMVVFA 359



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +ACG  H+AV+T    L  FG   +GQ G GS +   +P+   +L   +V+ +A G  HT
Sbjct: 34  LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHT 93

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G+VY  GGN  GQLG G  +  N   L+E       + K +S G+  SA LTED
Sbjct: 94  LVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEF-FTSQHQFKQLSAGSNTSAALTED 152

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +   P  V + G     I+CG++H+  + 
Sbjct: 153 GKLFMWGENSEGQIGLNNVCNVYFPHEVTV-GKPIAWISCGYYHSAFVT 200



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 44/284 (15%)

Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGK 269
           T +A G  HT +++   +++ +G    GQLGLGS+   V  P  +  L     +H A G+
Sbjct: 32  TFLACGDEHTAVITGNKKLYMFGRNDWGQLGLGSK-SAVCKPTCVKALKPEKVKHVACGR 90

Query: 270 DRPLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVT 305
           +  L+  +G        N+ G+ G                  +   K+++ G   SA +T
Sbjct: 91  NHTLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALT 150

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
           + G L  +G    GQ G  +  +   P   +  +   +  I+ G +H+  +++EG +Y F
Sbjct: 151 EDGKLFMWGENSEGQIGLNNVCNVYFPHEVT--VGKPIAWISCGYYHSAFVTMEGELYTF 208

Query: 366 GGNQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
           G  +FG+LG       N  VP+L+  P +  K  + V+CG  H+ VLTE   V ++G  +
Sbjct: 209 GEPEFGKLGLPKQLLMNHKVPQLV--PGIPEKVIQ-VACGGGHTVVLTEKA-VYNFGLGQ 264

Query: 424 YGQLGLG----DSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           +GQLGLG    ++ +  I   V  H      I+CG  HT L+ +
Sbjct: 265 FGQLGLGTFVFETTEPKIMESVKDHKIT--YISCGENHTALITD 306



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 45/258 (17%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PTPHLIPCLEHAASGK 269
           G  I  ++ G  H+  ++  G+++ +G    G+LGL  ++ M    P L+P +       
Sbjct: 183 GKPIAWISCGYYHSAFVTMEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEK---- 238

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TND 328
                                V ++ACGG H+ V+T+  A+  FG G +GQ G G+   +
Sbjct: 239 ---------------------VIQVACGGGHTVVLTEK-AVYNFGLGQFGQLGLGTFVFE 276

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN--VPKL 386
              P    S+ D ++  I+ G  HT  I+  GR+Y FG  ++G+LG G++   N  VP L
Sbjct: 277 TTEPKIMESVKDHKITYISCGENHTALITDIGRMYTFGDGRYGKLGLGMENFTNQFVPTL 336

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL--VPIH 444
              P     +  +V+CG  H  V      V+        ++ LG   D  IP+   + I 
Sbjct: 337 C--PNFLRFKVHLVACGGCHMVVFATPRPVIE-------KIELGKIRDSRIPAAASLSIT 387

Query: 445 GFLPRNIACGWWHTLLLA 462
               RNI    +H  L A
Sbjct: 388 DLTSRNI----FHRTLSA 401



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 12/76 (15%)

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR---IKMVP 254
           F T  P ++      KIT ++ G  HT +++D+G+++ +G G  G+LGLG      + VP
Sbjct: 275 FETTEPKIMESVKDHKITYISCGENHTALITDIGRMYTFGDGRYGKLGLGMENFTNQFVP 334

Query: 255 T---------PHLIPC 261
           T          HL+ C
Sbjct: 335 TLCPNFLRFKVHLVAC 350


>gi|260826736|ref|XP_002608321.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
 gi|229293672|gb|EEN64331.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
          Length = 364

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 102/200 (51%), Gaps = 29/200 (14%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           VK + CG  HS  +T +G + ++G G  GQ GHG+T     P    +L  + +  IAAG 
Sbjct: 166 VKAVCCGKEHSLALTLSGRVFSWGNGSRGQLGHGTTEASNTPQVIEALEGVTMVTIAAGG 225

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD------------------QAENVPKLL--ETP 390
           WH+V +S  G +YV+G N+ GQLG                      Q +NV ++L   TP
Sbjct: 226 WHSVSVSAFGDLYVWGWNEAGQLGLPTSKHKTGPSDHKPSISEMGHQGDNVAEVLVQATP 285

Query: 391 IL----ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
            +      +    VSCG+RH+A LT DGQ+L+WGW  YGQLG G +    +P  V    F
Sbjct: 286 TIVDMPAGQEVSKVSCGSRHTAALTRDGQLLTWGWGAYGQLGNGQTERCEVPRAVEF--F 343

Query: 447 LPR---NIACGWWHTLLLAE 463
             R   N+ CG W+ L+  E
Sbjct: 344 KQRKVTNVWCGPWNVLVQVE 363



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 102/230 (44%), Gaps = 48/230 (20%)

Query: 22  VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
           + M G +  T+P      +P+P  L  G+  K VC   CG   +LA + SG++ +WG+  
Sbjct: 144 ITMLGDVQSTNP------TPLPVYL--GEKVKAVC---CGKEHSLALTLSGRVFSWGNGS 192

Query: 80  DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
             GQ    + +   TP+        ++V  AAG  H VSV+  G++Y WGW E       
Sbjct: 193 -RGQLGHGTTEASNTPQVIEALEGVTMVTIAAGGWHSVSVSAFGDLYVWGWNE------- 244

Query: 140 TRDFGSAGSFQKDSTGKQSALPT--EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
                            Q  LPT   +  PSD +           S    + +N A  + 
Sbjct: 245 ---------------AGQLGLPTSKHKTGPSDHKP--------SISEMGHQGDNVA--EV 279

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
               +P +V +  G +++KV+ G RHT  L+  GQ+  WG+G  GQLG G
Sbjct: 280 LVQATPTIVDMPAGQEVSKVSCGSRHTAALTRDGQLLTWGWGAYGQLGNG 329



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 13/147 (8%)

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           ++ CG      +TD G +   G          STN    P Y    +  +V+ +  G  H
Sbjct: 127 DVVCGESTILALTDTGDITMLG-------DVQSTNPTPLPVY----LGEKVKAVCCGKEH 175

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           ++ +++ GRV+ +G    GQLG G  +A N P+++E   LE      ++ G  HS  ++ 
Sbjct: 176 SLALTLSGRVFSWGNGSRGQLGHGTTEASNTPQVIEA--LEGVTMVTIAAGGWHSVSVSA 233

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPS 439
            G +  WGWN+ GQLGL  S  +  PS
Sbjct: 234 FGDLYVWGWNEAGQLGLPTSKHKTGPS 260



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 53/238 (22%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  + +  G K+  V  G  H+L L+  G+V+ WG G  GQLG G+  +   TP +I  
Sbjct: 154 NPTPLPVYLGEKVKAVCCGKEHSLALTLSGRVFSWGNGSRGQLGHGT-TEASNTPQVIEA 212

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           LE                       G + V  IA GG HS  V+  G L  +GW   GQ 
Sbjct: 213 LE-----------------------GVTMVT-IAAGGWHSVSVSAFGDLYVWGWNEAGQL 248

Query: 322 G-----HGSTNDQLRPSYAS-----------------SLMDI----QVEQIAAGLWHTVC 355
           G     H +     +PS +                  +++D+    +V +++ G  HT  
Sbjct: 249 GLPTSKHKTGPSDHKPSISEMGHQGDNVAEVLVQATPTIVDMPAGQEVSKVSCGSRHTAA 308

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           ++ +G++  +G   +GQLG G  +   VP+ +E    + ++   V CG  +  V  E+
Sbjct: 309 LTRDGQLLTWGWGAYGQLGNGQTERCEVPRAVE--FFKQRKVTNVWCGPWNVLVQVEE 364



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
           P+   ++ K V CG  HS  LT  G+V SWG    GQLG G +   N P ++  + G   
Sbjct: 159 PVYLGEKVKAVCCGKEHSLALTLSGRVFSWGNGSRGQLGHGTTEASNTPQVIEALEGVTM 218

Query: 449 RNIACGWWHTL 459
             IA G WH++
Sbjct: 219 VTIAAGGWHSV 229


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 160/378 (42%), Gaps = 76/378 (20%)

Query: 25  WGY----LPG--TSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
           WGY     PG  +S  +  +  P         S K+V CGG     L   E G++ T GS
Sbjct: 4   WGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLL--EDGEVYTCGS 61

Query: 78  ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
            + +GQ  L   + G  PE      +  +V  A G +H +++++ G++++WG        
Sbjct: 62  -NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGA------- 111

Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
                 GS G     +T    A+P        K+  ++++   + S         A+  +
Sbjct: 112 ------GSDGQLGHTTTEDSVAIPR-----LIKKLNQQMI--LQVSCGNWHCMALAADGQ 158

Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
           FFT                   SP  V    G+ + +VAAGG H+  LS  G V+GWG  
Sbjct: 159 FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRN 218

Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
             GQLGL        T    PC           LL  Q  V             I+CG  
Sbjct: 219 NAGQLGLSDE-----TDRQSPC--------HVKLLRTQKVV------------YISCGEE 253

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISV 358
           H+AV+T +G + TFG G +GQ GH S ND++ P     LM  +V QIA G  HT+  +  
Sbjct: 254 HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS 313

Query: 359 EGRVYVFGGNQFGQLGTG 376
            G +Y FG    GQLGTG
Sbjct: 314 SGLIYAFGCGARGQLGTG 331



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 113/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLG  +    V  P LI              
Sbjct: 87  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIK------------- 133

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 134 -----------KLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASP 182

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   +     P      +L
Sbjct: 183 QRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSP--CHVKLL 240

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G   +GQLG     D   P  ++ + G     I
Sbjct: 241 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQI 300

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 301 ACGRQHTL 308



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLG------------------HEREG-NKPE 77

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
            +        G     ++  +ACG  HS  ++D G L ++G G  GQ GH +T D +  P
Sbjct: 78  QI--------GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIP 129

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N+ GQLG G +  ++  P+ +++  
Sbjct: 130 RLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKS-- 187

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 188 LEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQ----SPCHVKLLRTQ 243

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 244 KVVYISCGEEHTAVLTKS 261



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 110/278 (39%), Gaps = 31/278 (11%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG   +LA S+ G+L +WG+  D    + T+      P       +  +++ + G  HC
Sbjct: 91  ACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHC 150

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +++   G+ +TWG         + ++F S  S Q+        +P  Q       +    
Sbjct: 151 MALAADGQFFTWGQNRH-GQLGLGKEFPSQASPQR--VKSLEGIPLAQVAAGGAHSFALS 207

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           +        R  +      DE    SPC V L    K+  ++ G  HT +L+  G V+ +
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G  GQLG  S    V                 R +L   G          S V +IAC
Sbjct: 268 GAGSFGQLGHDSMNDEV---------------NPRRVLELMG----------SEVTQIAC 302

Query: 297 GGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           G +H+ A V  +G +  FG G  GQ G G T +   PS
Sbjct: 303 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPS 340



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   G  G  S+N Q     P     + D  ++++A G  H++ +  +G VY  G
Sbjct: 1   MLCWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG 60

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 61  SNTKGQLGH--EREGNKPE--QIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 116

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LG   + D   IP L+  ++  +   ++CG WH + LA   Q 
Sbjct: 117 LGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQF 159


>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
 gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 393

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 168/437 (38%), Gaps = 101/437 (23%)

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           +I WGS +D GQ  + + +  E           SV    +G  + +++ + G ++TWGW 
Sbjct: 7   IIAWGSGED-GQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
                             Q+ + G Q    TE  P   K                     
Sbjct: 66  ------------------QRGTLGHQPETKTENIPSRVKALAN----------------- 90

Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ-------- 243
                               VKIT+ A GG H L + D G+ + WG    GQ        
Sbjct: 91  --------------------VKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKD 130

Query: 244 -LGLGSRIKMVPTPHLIPCL---EHAASGKDRPLLVRQGSVNSSGK-------------- 285
            +G   R  +V      P L   + AA G    +L R+G V + G+              
Sbjct: 131 EMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPV 190

Query: 286 --AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              G   V+ IA G  H+  + + G LL +G   YGQ G G T     P     L D+ +
Sbjct: 191 RVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTL 250

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
             IAAG WH+  ++ +G VY +G  + G+LG G +   +     +  +L  +    VSCG
Sbjct: 251 VDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCG 310

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP--------------- 448
             HS  LT DG++ S+G   +G+LG G  +    P  +PI    P               
Sbjct: 311 GTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKW 370

Query: 449 --RNIACGWWHTLLLAE 463
             ++IACG  HTL + E
Sbjct: 371 SAKSIACGGRHTLAIVE 387



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 44/274 (16%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           C+V       +  V +G R++L + D G ++ WG+   G LG     K    P  +  L 
Sbjct: 30  CVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALA 89

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
           +                          + + A GG H   V D G    +G   YGQCG 
Sbjct: 90  NVK------------------------ITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 324 GSTNDQL-RPSYASSLM------DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
               D++ RP     ++       + V Q+AAG  H+V ++ EG V+ +G         G
Sbjct: 126 EPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWG----QPWPPG 181

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
             +  +VP  ++   LE+ R  +++ GA H+  L EDG++L+WG N+YGQLG GD+   +
Sbjct: 182 DIKQISVPVRVQG--LENVR--LIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTS 237

Query: 437 IPSLVPIHGFLPR---NIACGWWHTLLLAETTQI 467
            P  VP+ G       +IA G WH+  L +  ++
Sbjct: 238 HP--VPVQGLDDLTLVDIAAGGWHSTALTDKGEV 269



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 144/377 (38%), Gaps = 66/377 (17%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  + G + TWG        +    K    P          + +AA G  HC++V + 
Sbjct: 50  SLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ 109

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQ-KDSTG----KQSALPTEQAPPSDKR----AG 173
           G  Y WG  E          +G  G    KD  G    +   +P   AP    R     G
Sbjct: 110 GRAYAWGGNE----------YGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGG 159

Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
              V   +        +    GD      P  V     V++  +A G  H L L + G++
Sbjct: 160 THSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRL--IAVGAFHNLALEEDGRL 217

Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
             WG    GQLG G      PT H +P       G D   LV                 +
Sbjct: 218 LAWGNNEYGQLGTGD---TQPTSHPVPV-----QGLDDLTLV-----------------D 252

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN--DQLRPSYASSLMDIQVEQIAAGLW 351
           IA GG HS  +TD G +  +G G +G+ G G  +   ++ P   + L +  + Q++ G  
Sbjct: 253 IAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGT 312

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL---------------ESK- 395
           H+V ++ +GR++ FG    G+LG G       P  LE PI                E K 
Sbjct: 313 HSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP--LELPIKIPPPEGSFNHTDEEEEGKW 370

Query: 396 RAKVVSCGARHSAVLTE 412
            AK ++CG RH+  + E
Sbjct: 371 SAKSIACGGRHTLAIVE 387


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 38/262 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ I K+A G  HT I+S  GQ++ +G G  G LG G  + +                  
Sbjct: 311 GISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVA----------------- 353

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD----------AGALLTFGWGLYGQ 320
           RP  V       S K  R+  K IACG  H+A + +          +G L T+G    G+
Sbjct: 354 RPKQVE------SLKGVRA--KAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGK 405

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GH     +L P+    L D    Q++     T+ +++ G V+  G  + G+LG  + + 
Sbjct: 406 LGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSED 465

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
            ++  L+E P L+++  + +S G+ H AVLT +G+V +WG    GQLGLGD +DR+ P+L
Sbjct: 466 TSIC-LIEGP-LKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTL 523

Query: 441 V-PIHGFLPRNIACGWWHTLLL 461
           V  +      +IACG+  T+ +
Sbjct: 524 VEALEDKQVHSIACGFNFTMAI 545



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ +ACG +H+A+VT  G + ++G    G+ GH  +     P    SL   +V+ IA G 
Sbjct: 207 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGA 266

Query: 351 WHTVCISVEGRVYVF--GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            HT  +S+ G +Y +  G +  G  G    +++  P  L  P L+      ++CG  H+A
Sbjct: 267 KHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGP-LDGISILKIACGHWHTA 325

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           +++  GQ+ ++G   +G LG GD++    P  V  + G   + IACG WHT  + E
Sbjct: 326 IISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVE 381



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 8/141 (5%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P   ++   I V+ +A G  H   ++ +G V+ +G +  G+LG  V  + + PK++E+  
Sbjct: 196 PRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIES-- 253

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRN--IPSLV--PIHGF 446
           L S R K ++ GA+H+  ++  G++  WG   +  LGL GD   R+   P  +  P+ G 
Sbjct: 254 LASTRVKAIAFGAKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGI 312

Query: 447 LPRNIACGWWHTLLLAETTQI 467
               IACG WHT +++   Q+
Sbjct: 313 SILKIACGHWHTAIISSAGQL 333


>gi|357520081|ref|XP_003630329.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524351|gb|AET04805.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 230

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 6/189 (3%)

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
           + S   A   +V  I+ G  H+  +     + ++G G  GQ GHG T+D+L P+  S+  
Sbjct: 3   IMSEKSASPPHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFD 62

Query: 340 DIQVEQIAAGLWHTVCISVEGR-VY---VFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
              +  +  G  +TV  S  G+ VY    +G NQ G+LG G  +  +VP+  +    E  
Sbjct: 63  GQDIVSVTCGADYTVARSKSGKDVYSWGCWGRNQNGELGLGTTKDSHVPQ--KILAFEGI 120

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
           R K+V+ GA HS  +TEDG +  WGW +YG LGLGD+ DR IP  V I G     ++CGW
Sbjct: 121 RIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGW 180

Query: 456 WHTLLLAET 464
            HT+ ++ +
Sbjct: 181 RHTISISSS 189



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 34/233 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           +  ++AG  HT+ L     V  WG G +GQLG G          L+P    A  G+D   
Sbjct: 14  VLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGD-----TDDRLLPTKLSAFDGQD--- 65

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG-----QCGHGSTND 328
                            +  + CG  ++   + +G  + + WG +G     + G G+T D
Sbjct: 66  -----------------IVSVTCGADYTVARSKSGKDV-YSWGCWGRNQNGELGLGTTKD 107

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    +   I+++ +AAG  H+V I+ +G +Y +G  ++G LG G      +P   E
Sbjct: 108 SHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIP---E 164

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              ++  +  +VSCG RH+  ++  G + + GW+KYGQLG GD  D  +P  V
Sbjct: 165 KVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKV 217



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 91/207 (43%), Gaps = 30/207 (14%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ---VWG-WGYGGE 241
           R E      GD    L P  ++   G  I  V  G  +T+  S  G+    WG WG    
Sbjct: 38  RGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGCWGRNQN 97

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           G+LGLG+  K    P  I   E           +R              +K +A G  HS
Sbjct: 98  GELGLGT-TKDSHVPQKILAFEG----------IR--------------IKMVAAGAEHS 132

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
             +T+ G L  +GWG YG  G G TND+L P   +   D ++  ++ G  HT+ IS  G 
Sbjct: 133 VAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGD-KIVMVSCGWRHTISISSSGG 191

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLE 388
           +Y  G +++GQLG G  +   VP+ ++
Sbjct: 192 LYTHGWSKYGQLGHGDFEDCLVPRKVQ 218



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 26/144 (18%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  +    G++I  VAAG  H++ +++ G ++GWG+G  G LGLG          LIP  
Sbjct: 111 PQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGD-----TNDRLIP-- 163

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           E      D+ ++V                   +CG RH+  ++ +G L T GW  YGQ G
Sbjct: 164 EKVNIDGDKIVMV-------------------SCGWRHTISISSSGGLYTHGWSKYGQLG 204

Query: 323 HGSTNDQLRPSYASSLMDIQVEQI 346
           HG   D L P    +L D  + Q+
Sbjct: 205 HGDFEDCLVPRKVQALSDKLISQV 228



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)

Query: 42  IPARLCGGDSWKDVCGGGCG--FALATSESGK-LITWG--SADDEGQSYLTSGKHGETPE 96
           +P +L   D  +D+    CG  + +A S+SGK + +WG    +  G+  L + K    P+
Sbjct: 54  LPTKLSAFDG-QDIVSVTCGADYTVARSKSGKDVYSWGCWGRNQNGELGLGTTKDSHVPQ 112

Query: 97  PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
                    +   AAG  H V++TE G++Y WGW
Sbjct: 113 KILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGW 146


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 184/454 (40%), Gaps = 105/454 (23%)

Query: 22  VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
           V+ WG   G+  E      P+P  L    +  DV    CG   A   ++ G++ +WG   
Sbjct: 234 VFFWGDAFGSILECGDTSKPLPM-LVDSTNMLDVQSIACGETHAAIITKQGEVYSWG--- 289

Query: 80  DEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
           +E    + +  + +   P  + + AS  V   A G  H  +VT +GE+  WG        
Sbjct: 290 NESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGSKHTCAVTVSGELIEWG-------- 341

Query: 138 KVTRDFGSAGSF--QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG 195
                    G +  Q DS  +    P +   P D                          
Sbjct: 342 --------EGPYMGQLDSYARNQWFPHKLFSPLD-------------------------- 367

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
                          G+ + K+A G  HT I++  GQ++ +G G  G LG G        
Sbjct: 368 ---------------GISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGD------- 405

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA-------- 307
                       G  RP  V       S K  R  VK +ACG  H+A + +         
Sbjct: 406 ----------TQGTTRPKEVE------SLKGSR--VKCVACGPWHTAAIVEVISDFKSNS 447

Query: 308 --GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
               L T+G    G+ GH     +L P+   SL D    Q++ G   TV +SV G V+  
Sbjct: 448 PRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGTALTVALSVTGVVFTS 507

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G +  GQLG      + V  +    +L+S+  + +S G+ H AV+T +G+V +WG  K G
Sbjct: 508 GSSMHGQLGNPHADGKTVSAV--EGLLKSEFVRHISSGSSHVAVVTTNGKVFTWGKGKEG 565

Query: 426 QLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
           QLGLGD ++R+ P+LV  + G    +++CG+ +T
Sbjct: 566 QLGLGDFLNRSTPTLVDALEGRHVESLSCGYNYT 599



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 123/274 (44%), Gaps = 39/274 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P LV     + +  +A G  H  I++  G+V+ WG    G++G    IK+          
Sbjct: 255 PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKV---------- 304

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY-GQC 321
                   RP +V+             +VK++A G +H+  VT +G L+ +G G Y GQ 
Sbjct: 305 -------SRPKVVQS--------LASLHVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQL 349

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
              + N        S L  I V +IA G WHT  I+  G++Y +G   FG LG G  Q  
Sbjct: 350 DSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGT 409

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTE----------DGQVLSWGWNKYGQLGLGD 431
             PK +E+  L+  R K V+CG  H+A + E            ++ +WG    G+LG  D
Sbjct: 410 TRPKEVES--LKGSRVKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHAD 467

Query: 432 SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
              + IP+ V  +  +    ++CG   T+ L+ T
Sbjct: 468 KKMKLIPTCVDSLTDYDFIQVSCGTALTVALSVT 501



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 15/163 (9%)

Query: 313 FGWG-LYG---QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           F WG  +G   +CG  S   +  P    S   + V+ IA G  H   I+ +G VY +G  
Sbjct: 235 FFWGDAFGSILECGDTS---KPLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNE 291

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             G++G  V+   + PK++++  L S   K V+ G++H+  +T  G+++ WG   Y  +G
Sbjct: 292 SSGRIGNQVNIKVSRPKVVQS--LASLHVKDVAYGSKHTCAVTVSGELIEWGEGPY--MG 347

Query: 429 LGDSIDRN--IPS--LVPIHGFLPRNIACGWWHTLLLAETTQI 467
             DS  RN   P     P+ G     IACG WHT ++  + Q+
Sbjct: 348 QLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQL 390



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 123/325 (37%), Gaps = 60/325 (18%)

Query: 53  KDVCGGGCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEA-SVVKA 109
           KDV  G      A + SG+LI WG     GQ  SY    ++   P     P +  SVVK 
Sbjct: 319 KDVAYGS-KHTCAVTVSGELIEWGEGPYMGQLDSY---ARNQWFPHKLFSPLDGISVVKI 374

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP--- 166
           A G  H   +T +G++YT+G             FG  G      T +   + + +     
Sbjct: 375 ACGPWHTAIITSSGQLYTYG----------DGTFGVLGHGDTQGTTRPKEVESLKGSRVK 424

Query: 167 -----PSDKRAGEEVVKRRKTSSARE--------ESENPASGDEFFTLSPCLVTLNPGVK 213
                P    A  EV+   K++S R         +       D+   L P  V       
Sbjct: 425 CVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYD 484

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
             +V+ G   T+ LS  G V+  G    GQLG          PH        A GK    
Sbjct: 485 FIQVSCGTALTVALSVTGVVFTSGSSMHGQLG---------NPH--------ADGKTVSA 527

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           +         G     +V+ I+ G  H AVVT  G + T+G G  GQ G G   ++  P+
Sbjct: 528 V--------EGLLKSEFVRHISSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFLNRSTPT 579

Query: 334 YASSLMDIQVEQIAAGLWHT--VCI 356
              +L    VE ++ G  +T  VC+
Sbjct: 580 LVDALEGRHVESLSCGYNYTAAVCL 604


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 38/261 (14%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHL 258
           L+P  +   P   + ++A G RHTL L+  G+V+  G     QLG  L S+ + +  P L
Sbjct: 25  LTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSK-RPLQIPEL 83

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           + C+                            + +IACG RHS  +T+ G +L++G    
Sbjct: 84  VDCV----------------------------ITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 319 GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           GQ GH S  D ++ P    +L+   V QIA G  H++ ++  G +Y +G N +GQLG   
Sbjct: 116 GQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKT 175

Query: 378 DQAE---NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
                  N P LL T +    RA  ++CG  HS ++++   V  WG N  GQLGL D  +
Sbjct: 176 PSELGQCNAPMLLTTLLGIPVRA--IACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETN 233

Query: 435 RNIPS-LVPIHGFLPRNIACG 454
           R  P+ L  +     R +ACG
Sbjct: 234 RAYPTQLKTLRTLGVRFVACG 254



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 141/355 (39%), Gaps = 55/355 (15%)

Query: 50  DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVV 107
           DS  +    G    L  + SGK+   GS D     Y   G    +  P  +P   +  + 
Sbjct: 35  DSAVNQIACGHRHTLFLTASGKVYACGSND-----YAQLGHELSSKRPLQIPELVDCVIT 89

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWREC-----------VPSAKVTRDFGSAGSFQKDSTGK 156
           + A G  H +++TE G+V +WG  EC           V   K  R   S    Q      
Sbjct: 90  QIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNN 149

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
            S   T          G  +  +    +  E  +  A         P L+T   G+ +  
Sbjct: 150 HSLALT--CCGELYAWGSNIYGQLGVKTPSELGQCNA---------PMLLTTLLGIPVRA 198

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A GG H+ ++S    V+GWG    GQLGL                       +R    +
Sbjct: 199 IACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE-------------------TNRAYPTQ 239

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
             ++ + G      V+ +ACG   S  +T+ G + T G G YGQ GHG   +++ P    
Sbjct: 240 LKTLRTLG------VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNEMLPRMVM 293

Query: 337 SLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            LM   + Q+A G  HT+  +   GR+Y FG    GQLGT   ++ N+P+++  P
Sbjct: 294 ELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSLNLPQMVIGP 348



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 40/263 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
           IT++A G RH++ L++ GQV  WG    GQLG  S   +V  P  +  L        A G
Sbjct: 88  ITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACG 147

Query: 269 KDRPLLVR--------------QGSVNSSGKAGRSY------------VKEIACGGRHSA 302
            +  L +               Q  V +  + G+              V+ IACGG HS 
Sbjct: 148 NNHSLALTCCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSF 207

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAAGLWHTVCISVE 359
           +++ + A+  FGWG    CG    ND+   +Y + L  ++   V  +A G   +V ++ E
Sbjct: 208 LISKSSAV--FGWG-RNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNE 264

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLS 418
           G V+  G   +GQLG G    E +P+++    L       V+CG RH+ A++   G++  
Sbjct: 265 GGVFTCGAGAYGQLGHGFCGNEMLPRMVME--LMGSTISQVACGNRHTLAMVPARGRIYG 322

Query: 419 WGWNKYGQLGLGDSIDRNIPSLV 441
           +G    GQLG  ++   N+P +V
Sbjct: 323 FGLGSSGQLGTRNTKSLNLPQMV 345



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 84/160 (52%), Gaps = 16/160 (10%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           L  +G   +GQ G G   D+  L PS      D  V QIA G  HT+ ++  G+VY  G 
Sbjct: 3   LYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGS 62

Query: 368 NQFGQLGTGVDQAE--NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           N + QLG  +       +P+L++  I +      ++CG+RHS  LTE GQVLSWG N+ G
Sbjct: 63  NDYAQLGHELSSKRPLQIPELVDCVITQ------IACGSRHSMALTEWGQVLSWGDNECG 116

Query: 426 QLGLGDSIDRNIPSL-VPIHGFLPR---NIACGWWHTLLL 461
           Q  LG + D+++  L   +   + +    IACG  H+L L
Sbjct: 117 Q--LGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLAL 154


>gi|196003320|ref|XP_002111527.1| hypothetical protein TRIADDRAFT_55637 [Trichoplax adhaerens]
 gi|190585426|gb|EDV25494.1| hypothetical protein TRIADDRAFT_55637 [Trichoplax adhaerens]
          Length = 346

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 97/175 (55%), Gaps = 5/175 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  ++CG  H+ +++  G + +FG G  GQ GH + +++  P    +L  +Q + +  G 
Sbjct: 168 VNLVSCGKEHALILSITGEVFSFGRGSRGQLGHDTLDNEGNPRVIEALQGLQFKLVTCGG 227

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPIL---ESKRAKVVSCGARH 406
           WH+  IS  G  Y +G NQ  QLG   + +A  V   + TP L   E++  + +S G++H
Sbjct: 228 WHSFAISSSGDAYSWGWNQSYQLGIDSNLEANEVGSCIATPTLIEIENENVQAISGGSKH 287

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLL 460
           SA +TE G+V +WGW KYGQLG        +P LV  +   L   + CG+WHT++
Sbjct: 288 SACITESGKVYTWGWGKYGQLGHNCYDSVKVPQLVTALSEKLASTVTCGFWHTIV 342



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 145/354 (40%), Gaps = 63/354 (17%)

Query: 87  TSGKHGETPEPF---PLPTEASVVKAAAGWAHCVSVT-----EAGEVYTWGWREC---VP 135
           T   H    +P     +  +  +V   AGW+  V +T     +    + WG + C   +P
Sbjct: 21  TCNTHMSYNQPLLMAKIDKDHRIVSMTAGWSESVIITRDTKTDRTSTHAWG-KSCHDQIP 79

Query: 136 SAKVTRDFGSAGSFQKDSTGKQ-----------SALPTEQAPPSDKRAGEEVVKRRKTSS 184
              +    GS       ST KQ           + L   + P      G       + + 
Sbjct: 80  RNDILAASGSWDKLMLLSTKKQLLLCSNLEDIANTLKAIENPSEQTYRGISCGDLHQLAI 139

Query: 185 AREESE---NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
             +E     + ++    F+L P L T     ++  V+ G  H LILS  G+V+ +G G  
Sbjct: 140 TTDEQVGQVDKSNSSWCFSLLPTLQT----TRVNLVSCGKEHALILSITGEVFSFGRGSR 195

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           GQLG  + +     P +I  L+                       G  + K + CGG HS
Sbjct: 196 GQLGHDT-LDNEGNPRVIEALQ-----------------------GLQF-KLVTCGGWHS 230

Query: 302 AVVTDAGALLTFGWGLYGQCGHGST--NDQLRPSYAS-SLMDIQ---VEQIAAGLWHTVC 355
             ++ +G   ++GW    Q G  S    +++    A+ +L++I+   V+ I+ G  H+ C
Sbjct: 231 FAISSSGDAYSWGWNQSYQLGIDSNLEANEVGSCIATPTLIEIENENVQAISGGSKHSAC 290

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
           I+  G+VY +G  ++GQLG     +  VP+L+    L  K A  V+CG  H+ V
Sbjct: 291 ITESGKVYTWGWGKYGQLGHNCYDSVKVPQLVTA--LSEKLASTVTCGFWHTIV 342



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR--NIPSLVPIHGFL 447
           P L++ R  +VSCG  H+ +L+  G+V S+G    GQLG  D++D   N   +  + G  
Sbjct: 161 PTLQTTRVNLVSCGKEHALILSITGEVFSFGRGSRGQLG-HDTLDNEGNPRVIEALQGLQ 219

Query: 448 PRNIACGWWHTLLLAET 464
            + + CG WH+  ++ +
Sbjct: 220 FKLVTCGGWHSFAISSS 236


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 115/251 (45%), Gaps = 28/251 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  I  VA G  H++ LSD GQ++ WG G +GQLGL +    V  P LI           
Sbjct: 83  GQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIK---------- 132

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQ 329
                         K  +  + +++CG  H   +   G   T+G   YGQ G G     Q
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQ 178

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
             P    SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P     
Sbjct: 179 ASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESP--CHV 236

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLP 448
            +L S++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G   
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 449 RNIACGWWHTL 459
             IACG  HTL
Sbjct: 297 SQIACGRHHTL 307



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 137/316 (43%), Gaps = 83/316 (26%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAHCVSVTE 121
           ++A S+ G+L +WG+  D GQ  LT+ +   T P       + ++++ + G  HC+++  
Sbjct: 96  SVALSDQGQLFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAA 154

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
            G+ +TWG             +G  G       GK+   P++ +P           +R K
Sbjct: 155 DGQFFTWG----------QNSYGQLG------LGKEC--PSQASP-----------QRVK 185

Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
           +                            G+ + +VAAGG H+  LS  G V+GWG    
Sbjct: 186 SLD--------------------------GIPLAQVAAGGAHSFALSLSGAVFGWGKNSS 219

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           GQLGL                      ++ P  V+   +  S K     V  I+CG  H+
Sbjct: 220 GQLGLSDE-----------------RDRESPCHVK---LLRSQK-----VVYISCGEEHT 254

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEG 360
           AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   G
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSG 314

Query: 361 RVYVFGGNQFGQLGTG 376
            +Y FG    GQLGTG
Sbjct: 315 MIYAFGCGTRGQLGTG 330



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 95/197 (48%), Gaps = 30/197 (15%)

Query: 236 WGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
           WGY   GQ G+GS ++ ++P P +   +       DR                   VKE+
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEPQVYGFIH------DRN------------------VKEV 39

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           ACGG HS  + + G + T G    GQ GH       +P    +L    +  +A G  H+V
Sbjct: 40  ACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS--KPEQIGALAGQHIVHVACGESHSV 97

Query: 355 CISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
            +S +G+++ +G    GQLG T ++ A  VP+L++   L  +    VSCG  H   L  D
Sbjct: 98  ALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKK--LNQQTILQVSCGNWHCLALAAD 155

Query: 414 GQVLSWGWNKYGQLGLG 430
           GQ  +WG N YGQLGLG
Sbjct: 156 GQFFTWGQNSYGQLGLG 172



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 12/164 (7%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G+  YGQ G GS    +   P     + D  V+++A G  H+V +  +G VY  G 
Sbjct: 1   MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 368 NQFGQLGTGVD--QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           N  GQLG   +  + E +  L    I+       V+CG  HS  L++ GQ+ SWG    G
Sbjct: 61  NTKGQLGHDCEGSKPEQIGALAGQHIVH------VACGESHSVALSDQGQLFSWGAGSDG 114

Query: 426 QLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           QLGL    D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 123/256 (48%), Gaps = 39/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ I+ VA G  HT ++S  G+++ +G G  G LG G+ I +   P  +  L        
Sbjct: 426 GISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISL-SQPKEVESLNGLC---- 480

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD-----------AGALLTFGWGLYG 319
                               VK +ACG  H+A + D            G L T+G G  G
Sbjct: 481 --------------------VKSVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKG 520

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG    +L P+  + L+D    Q++ G   TV ++  GRVY  G +  GQLG    +
Sbjct: 521 KLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSR 580

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
             +V  ++E  + E +  K +S G+ H A LT  G+V +WG   +GQLGLGDS DRN+P+
Sbjct: 581 DASVA-IVEGKLKE-EFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPT 638

Query: 440 LVPIHGFLP-RNIACG 454
            V   G     +IACG
Sbjct: 639 FVEALGDKQVESIACG 654



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 95/179 (53%), Gaps = 10/179 (5%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ I+ GG+H+A++T  G + ++G G  G+ GH    D   P    SL  I  + +A G 
Sbjct: 322 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVACGE 381

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-----VPKLLETPILESKRAKVVSCGAR 405
           + T  ++  G VY +G ++F   G   D  EN     +P+ L  P L+      V+CG  
Sbjct: 382 YQTCALTKAGEVYTWGDSRF---GADFDCEENSRSRWLPQKLSGP-LKGISISNVACGEW 437

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           H+AV++  G++ ++G   +G LG G+ I  + P  V  ++G   +++ACG WHT  + +
Sbjct: 438 HTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVD 496



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 6/139 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S M + V+ I+ G  H   I+  G ++ +G  + G+LG  ++   + PKL+
Sbjct: 307 DALLPKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLV 366

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN--IPSLV--PI 443
           ++  L    AK V+CG   +  LT+ G+V +WG +++G     +   R+  +P  +  P+
Sbjct: 367 DS--LNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL 424

Query: 444 HGFLPRNIACGWWHTLLLA 462
            G    N+ACG WHT +++
Sbjct: 425 KGISISNVACGEWHTAVVS 443



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 134/325 (41%), Gaps = 63/325 (19%)

Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP- 167
            A G     ++T+AGEVYTWG            D      F  +   +   LP + + P 
Sbjct: 377 VACGEYQTCALTKAGEVYTWG------------DSRFGADFDCEENSRSRWLPQKLSGPL 424

Query: 168 -----SDKRAGE---EVVKRRKTSSAREESENPASGD-EFFTLS-PCLVTLNPGVKITKV 217
                S+   GE    VV          +    A G     +LS P  V    G+ +  V
Sbjct: 425 KGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSV 484

Query: 218 AAGGRHTLILSDM-----------GQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHA 265
           A G  HT  + D+           G+++ WG G +G+LG G +  K++PT     C+   
Sbjct: 485 ACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPT-----CVA-- 537

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                 PL+                  +++CG   +  +T+ G + T G  ++GQ G+ S
Sbjct: 538 ------PLV-------------DCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLS 578

Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
           + D         L +  V+ I++G +H   ++  GRVY +G    GQLG G     N+P 
Sbjct: 579 SRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPT 638

Query: 386 LLETPILESKRAKVVSCGARHSAVL 410
            +E   L  K+ + ++CG+  +A +
Sbjct: 639 FVEA--LGDKQVESIACGSNFTAAI 661


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 133/261 (50%), Gaps = 32/261 (12%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L LS  G+V+ WG G +G+LG G+++         PC        DR
Sbjct: 3701 VKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKL---------PC--------DR 3743

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P ++     +  GK     V ++ACGG HSA +T  G L T+G G YG+ GHG ++DQL+
Sbjct: 3744 PRIIE----SLRGKD----VVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLK 3795

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVE--GRVYVFGGNQFGQLGTGVDQAENVPKLL 387
            P    +L+  +V  +A  +G   T  I+ E  G V+ +G   +G+LG G      +P  +
Sbjct: 3796 PKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKI 3855

Query: 388  ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIHGF 446
            E+  L       V CG++ S  L+ +G V +WG   Y +LG G D   R    ++ + G 
Sbjct: 3856 ES--LSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGK 3913

Query: 447  LPRNIACGWWHTLLLAETTQI 467
               +I+ G  H ++  +  ++
Sbjct: 3914 KVISISTGALHCVVCTDQGEV 3934



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 125/259 (48%), Gaps = 30/259 (11%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            V+   V +GGRH L L+  G+V+ WG G +G+LG G  +  + TP    C+E A +G   
Sbjct: 2785 VRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGD-VTSLDTPR---CIE-ALNG--- 2836

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                               V+++A G  HSA VT +G L T+G G YG+ GHG    QL 
Sbjct: 2837 -----------------FRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLT 2879

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    SL+  +V Q++ G     T+ +   G VY +G   FG+LG G  +  + P L++ 
Sbjct: 2880 PKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDK 2939

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
              L       V CGA+ S  LT +G V +WG   Y +LG G       P+LV  + G   
Sbjct: 2940 --LSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKV 2997

Query: 449  RNIACGWWHTLLLAETTQI 467
              ++ G  H L + +  Q+
Sbjct: 2998 IGVSVGALHCLAVTDAGQV 3016



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 31/259 (11%)

Query: 204  CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
            C+  LN G ++  VAAG  H+  ++  G+++ WG G  G+LG G  +  + TP  +  L 
Sbjct: 2830 CIEALN-GFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQL-TPKRVESL- 2886

Query: 264  HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR--HSAVVTDAGALLTFGWGLYGQC 321
                                   G+  V +++CG R   +  + + G + ++G G +G+ 
Sbjct: 2887 ----------------------VGQRVV-QVSCGSRDAQTLALVEGGLVYSWGDGDFGKL 2923

Query: 322  GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G G +     P     L  + V  +  G   +V ++  G VY +G   + +LG G DQ  
Sbjct: 2924 GRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHV 2983

Query: 382  NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              P L+E   L  K+   VS GA H   +T+ GQV +WG N +GQ G G       P+LV
Sbjct: 2984 RWPTLVEG--LRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLV 3041

Query: 442  P-IHGFLPRNIACGWWHTL 459
              I G     +ACG  H++
Sbjct: 3042 QGIDGIKITRVACGSSHSV 3060



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 32/252 (12%)

Query: 206  VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
            V+L P      VA G +   +++  G+ +  G G  G+LGLG   + V +PH I  L   
Sbjct: 2729 VSLQP----ISVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGHS-RNVNSPHQITALSQH 2783

Query: 266  ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                    +VR+ +V+S              GGRH+  +T  G + ++G G  G+ GHG 
Sbjct: 2784 --------VVRKVAVHS--------------GGRHALALTADGRVFSWGEGDDGKLGHGD 2821

Query: 326  TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
                  P    +L   +V  +AAG  H+  ++  G +Y +G  ++G+LG G +  +  PK
Sbjct: 2822 VTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPK 2881

Query: 386  LLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-P 442
             +E+  L  +R   VSCG+R   +  L E G V SWG   +G+LG G S   + P LV  
Sbjct: 2882 RVES--LVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDK 2939

Query: 443  IHGFLPRNIACG 454
            + G    ++ CG
Sbjct: 2940 LSGLGVCHVECG 2951



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 117/254 (46%), Gaps = 32/254 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
            G  +  VA GG H+  ++ +G+++ WG G  G+LG G          L P L  A  G  
Sbjct: 3752 GKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDS-----DDQLKPKLVEALLGY- 3805

Query: 271  RPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTD--AGALLTFGWGLYGQCGHGST 326
                                V ++ACG     +  +TD   G + ++G G YG+ G G +
Sbjct: 3806 -------------------RVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGS 3846

Query: 327  NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
            +    P+   SL  + + ++  G   +V +S  G VY +G   + +LG GVD+    PK 
Sbjct: 3847 DGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKK 3906

Query: 387  LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHG 445
            + T  L+ K+   +S GA H  V T+ G+V +WG N  GQLG G +     P LV  +  
Sbjct: 3907 VMT--LQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQN 3964

Query: 446  FLPRNIACGWWHTL 459
                 ++CG  HT+
Sbjct: 3965 KKINRVSCGSAHTV 3978



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 34/229 (14%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
            GQ++GWG+   GQLG   G+++K       +P +  A S   RP+               
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVK-------VPTVCEALSAL-RPI--------------- 3650

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA- 347
                ++A G +    +T  G +   G+G  G+ G G       PS   SL  + V+++A 
Sbjct: 3651 ----QLAGGEQTLFAITSDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAV 3706

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H + +S EG VY +G  + G+LG G     + P+++E+  L  K    V+CG  H
Sbjct: 3707 NSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIES--LRGKDVVDVACGGAH 3764

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            SA +T  G++ +WG  +YG+LG GDS D+  P LV  + G+   ++ACG
Sbjct: 3765 SAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACG 3813



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 127/310 (40%), Gaps = 64/310 (20%)

Query: 63   ALATSESGKLITWGSADD--EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
            ALA +  G++ +WG  DD   G   +TS    +TP          V   AAG  H  +VT
Sbjct: 2797 ALALTADGRVFSWGEGDDGKLGHGDVTSL---DTPRCIEALNGFRVRDVAAGSNHSAAVT 2853

Query: 121  EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV--- 177
             +GE+YTWG  E          +G  G    D+  + +    E         G+ VV   
Sbjct: 2854 SSGELYTWGLGE----------YGRLG--HGDNLTQLTPKRVESL------VGQRVVQVS 2895

Query: 178  ---KRRKTSSAREESENPASGD-EFFTL---------SPCLVTLNPGVKITKVAAGGRHT 224
               +  +T +  E     + GD +F  L         SPCLV    G+ +  V  G + +
Sbjct: 2896 CGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFS 2955

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            + L+  G V+ WG G   +LG GS  + V  P L+                        G
Sbjct: 2956 VALTCNGHVYTWGKGDYFRLGHGSD-QHVRWPTLV-----------------------EG 2991

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
              G+  +  ++ G  H   VTDAG +  +G   +GQ G+GS     RP+    +  I++ 
Sbjct: 2992 LRGKKVIG-VSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKIT 3050

Query: 345  QIAAGLWHTV 354
            ++A G  H+V
Sbjct: 3051 RVACGSSHSV 3060



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 3/155 (1%)

Query: 307  AGALLTFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
            +GA   + WGL    Q G    +    P      + +Q   +A G      ++  G+ Y 
Sbjct: 2695 SGAKRVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYA 2754

Query: 365  FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
             G    G+LG G  +  N P  +        R   V  G RH+  LT DG+V SWG    
Sbjct: 2755 CGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDD 2814

Query: 425  GQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            G+LG GD    + P  +  ++GF  R++A G  H+
Sbjct: 2815 GKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHS 2849



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+A G      I+ +GRVY  G    
Sbjct: 3617 YGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATGYGAG 3676

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++  VP LLE+      +   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 3677 GRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHG 3736

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            + +  + P ++  + G    ++ACG  H+
Sbjct: 3737 NKLPCDRPRIIESLRGKDVVDVACGGAHS 3765



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A S +G + TWG  D     +    +H   P+         V+  + G  HCV 
Sbjct: 3869 GSQFSVALSNNGSVYTWGKGDYHRLGH-GVDEHVRRPKKVMTLQGKKVISISTGALHCVV 3927

Query: 119  VTEAGEVYTWG 129
             T+ GEVYTWG
Sbjct: 3928 CTDQGEVYTWG 3938



 Score = 42.4 bits (98), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 11/81 (13%)

Query: 55   VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE----ASVVK 108
            VC   CG  F++A + +G + TWG  D     Y   G   +    +P   E      V+ 
Sbjct: 2945 VCHVECGAQFSVALTCNGHVYTWGKGD-----YFRLGHGSDQHVRWPTLVEGLRGKKVIG 2999

Query: 109  AAAGWAHCVSVTEAGEVYTWG 129
             + G  HC++VT+AG+V+ WG
Sbjct: 3000 VSVGALHCLAVTDAGQVFAWG 3020


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 131/256 (51%), Gaps = 39/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G++++ VA G  HT +++  GQ++ +G G  G LG G + + V  P  +  L+       
Sbjct: 413 GIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDK-RSVALPKEVESLK------- 464

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD-----------AGALLTFGWGLYG 319
                           G   V+ +ACG  H+A V +           +G L T+G G  G
Sbjct: 465 ----------------GLKTVR-VACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKG 507

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG    +L P+  ++L+D   +Q+A G   TV +++ GRV+  G + +GQLG  V  
Sbjct: 508 RLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLGD-VRA 566

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
              +P L+E  + E+   + ++CGA H AVLT   +V +WG    G+LG GD +DRN P+
Sbjct: 567 DGKLPGLVEGRLWEA-FVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPT 625

Query: 440 LV-PIHGFLPRNIACG 454
           LV  +     +++ACG
Sbjct: 626 LVEALKEKQVKSVACG 641



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 129/300 (43%), Gaps = 48/300 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A G RH  +++  G+V+ WG    G+LG G  +  V  P L+  L     E  A
Sbjct: 307 LDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVD-VAHPKLVEALATTNTEFVA 365

Query: 267 SGKDRPLLVR-QGSVNSSGKAGRSY-------------------------VKEIACGGRH 300
            G+     V   G + + G    SY                         V  +ACG  H
Sbjct: 366 CGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGIRVSSVACGVWH 425

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI---- 356
           +A+VT AG L TFG G +G  GHG       P    SL  ++  ++A G+WHT  +    
Sbjct: 426 TALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGVWHTAAVVEVM 485

Query: 357 -------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
                     G+++ +G    G+LG G  + + VP  +    L     K V+CG   +  
Sbjct: 486 VGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAA--LVDYNFKQVACGHTLTVA 543

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
           LT +G+V + G + YGQLG     D  +P LV   +       IACG +H  +L   T++
Sbjct: 544 LTINGRVFTMGSSLYGQLG-DVRADGKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEV 602



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 7/161 (4%)

Query: 312 TFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            F WG     G G    D L P    S + + V  IA G  H   ++ +G V+ +G    
Sbjct: 277 VFLWGESVGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGDESG 336

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW--GWNKYGQLG 428
           G+LG GVD     PKL+E   L +   + V+CG  HS  +T  G + +W  G + YG LG
Sbjct: 337 GRLGHGVDVDVAHPKLVEA--LATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLG 394

Query: 429 LGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
            G+ I    P  V  P+ G    ++ACG WHT L+    Q+
Sbjct: 395 HGNDISHWTPKRVGGPLEGIRVSSVACGVWHTALVTSAGQL 435



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 40/228 (17%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM-----------GQVWGWGYGGEGQ 243
           GD+     P  V    G+K  +VA G  HT  + ++           G+++ WG G +G+
Sbjct: 449 GDKRSVALPKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGR 508

Query: 244 LGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           LG G +  K+VPT     C+                             K++ACG   + 
Sbjct: 509 LGHGDKEQKLVPT-----CVAALVDYN---------------------FKQVACGHTLTV 542

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +T  G + T G  LYGQ G    + +L       L +  VE+IA G +H   ++ +  V
Sbjct: 543 ALTINGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEV 602

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           Y +G    G+LG G     N P L+E   L+ K+ K V+CG+  +A +
Sbjct: 603 YTWGKGANGRLGHGDVMDRNTPTLVEA--LKEKQVKSVACGSGFTAAI 648


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 57  GDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT----- 111

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 151

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNG 211

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 212 QLGLG--SSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 269

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 270 KSNQSYPTPVVV 281



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 113/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 175 TGCLQNKV------------------------VVNIACGQMCSMAVVDTGEVYVWGYNGN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   S+L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 211 GQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP++  K    ++ +C + H SA  T+ G V  WG
Sbjct: 271 SNQSYP----TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 74  KKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVVNIACGQMC 192

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
           S  + + G+V  WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 193 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEG 252

Query: 466 QI 467
           Q+
Sbjct: 253 QV 254



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
           G G    LAT+E G++ TWG       S L +G       P  + T  S   V++ A G 
Sbjct: 82  GSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 137

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
            H + +T  GEV+ WG             + ++G     ST  Q  +P         +  
Sbjct: 138 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTANQ-PIPRRVTGCLQNKVV 183

Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
             +   +  S A  ++                 +SG++    +PC V+   G+++ +VA 
Sbjct: 184 VNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVSALQGIRVQRVAC 240

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           G  HTL+L+D GQV+ WG    GQLG G++     PTP ++
Sbjct: 241 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 281



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258


>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 162/381 (42%), Gaps = 44/381 (11%)

Query: 71  KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
           ++ +WG A  EGQ      +    P+    P+ +S+   A G AH +++T AG+V +WG 
Sbjct: 19  RVWSWG-AGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGR 77

Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
                S ++      + S    +                  +G         +       
Sbjct: 78  GN---SGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFG 134

Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-R 249
               GD     SP  V+      + +VA G RH+L+L    QV+G+G G  GQLG+ + R
Sbjct: 135 QLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDR 194

Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
           +K V  P ++   E                           +  IA  G HSA V+  G 
Sbjct: 195 VKSVNVPKVVSGFEGVE------------------------IAGIAANGDHSAAVSVDGH 230

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           + T+G G  G        D   P   +S ++    ++A G  H + +S EG V + GGN 
Sbjct: 231 VYTWGRGFKG------FEDARVPQCLNSSLNFT--KVALGWNHALAMSGEGEVCMLGGNH 282

Query: 370 FGQLGT--GVDQAENVPKLLET-----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
            G L     +  A+++P L E      P L+  +   ++ GA HS ++TE G++ +WGW 
Sbjct: 283 LGVLSDLQNISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWGWG 342

Query: 423 KYGQLGLGDSIDRNIPSLVPI 443
           ++GQLGLGD+ DR  P  V +
Sbjct: 343 EHGQLGLGDTRDRISPVTVSL 363



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 115/269 (42%), Gaps = 38/269 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE F   P L+       I+ +A GG H + L+  G+V  WG G  GQLG G  +     
Sbjct: 38  DEHF---PQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLY 94

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
           P  +  L+                          ++  ++ G  HS  V+D G + T G 
Sbjct: 95  PKAVTSLD------------------------GYFITHVSAGWGHSGFVSDNGCVFTCGD 130

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           G +GQ GHG       P   S  +D  VEQ+A G+ H++ +    +VY FG  + GQLG 
Sbjct: 131 GSFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGV 190

Query: 376 GVDQAE--NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
             D+ +  NVPK++     E      ++    HSA ++ DG V +WG       G     
Sbjct: 191 SNDRVKSVNVPKVVSG--FEGVEIAGIAANGDHSAAVSVDGHVYTWG------RGFKGFE 242

Query: 434 DRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           D  +P  +       + +A GW H L ++
Sbjct: 243 DARVPQCLNSSLNFTK-VALGWNHALAMS 270



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 4/108 (3%)

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           E RV+ +G    GQLGT + Q E+ P+LL  P L S  +  ++CG  H   LT  G+VLS
Sbjct: 17  EQRVWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISS--LACGGAHVIALTSAGKVLS 74

Query: 419 WGWNKYGQLGLGDSIDRNI--PSLVPIHGFLPRNIACGWWHTLLLAET 464
           WG    GQLG G  +  ++   ++  + G+   +++ GW H+  +++ 
Sbjct: 75  WGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDN 122



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 89/398 (22%), Positives = 154/398 (38%), Gaps = 88/398 (22%)

Query: 3   MNGSKREENEKMEECKETVVYMWGYLPGTSPE---------------KSPILSPIPARLC 47
           M   K+ ENE  ++  E  V+ WG   GT  +                 P LS I +  C
Sbjct: 1   MEEPKKTENEDDKDESEQRVWSWG--AGTEGQLGTKILQDEHFPQLLHQPSLSSISSLAC 58

Query: 48  GGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
           GG              +A + +GK+++WG  +     +     +   P+         + 
Sbjct: 59  GG-----------AHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFIT 107

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL--PTEQA 165
             +AGW H   V++ G V+T G                 GSF +   G  ++   P + +
Sbjct: 108 HVSAGWGHSGFVSDNGCVFTCG----------------DGSFGQLGHGDHASHCSPVKVS 151

Query: 166 PPSDKRAGEEVVKRRKT-----------SSAREESENPASGDEFFTLS-PCLVTLNPGVK 213
              D+   +     R +             + +  +   S D   +++ P +V+   GV+
Sbjct: 152 CFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVE 211

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEG-----------------QLGLG--------- 247
           I  +AA G H+  +S  G V+ WG G +G                 ++ LG         
Sbjct: 212 IAGIAANGDHSAAVSVDGHVYTWGRGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSG 271

Query: 248 -SRIKMVPTPHL--IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
              + M+   HL  +  L++ +  K  P L R+ ++        + + +IA G  HS +V
Sbjct: 272 EGEVCMLGGNHLGVLSDLQNISPAKHLPHL-REVNLEKVPGLDGTKITDIATGAEHSVIV 330

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
           T+ G + T+GWG +GQ G G T D++ P   S   D+ 
Sbjct: 331 TEHGEIKTWGWGEHGQLGLGDTRDRISPVTVSLGYDLN 368



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 8/160 (5%)

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           ++G G  GQ G     D+  P          +  +A G  H + ++  G+V  +G    G
Sbjct: 22  SWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSG 81

Query: 372 QLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           QLG G+  + ++ PK + +  L+      VS G  HS  ++++G V + G   +GQLG G
Sbjct: 82  QLGHGLVVSNSLYPKAVTS--LDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHG 139

Query: 431 DSIDRNIPSLVPIHGFLPRNI---ACGWWHTLLLAETTQI 467
           D      P  V +  F+ +++   ACG  H+L+L +  Q+
Sbjct: 140 DHASHCSP--VKVSCFVDQHVEQVACGMRHSLVLLKGNQV 177


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC               Q S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVTM 305



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 98/172 (56%), Gaps = 3/172 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H  + T  G + T+G   Y Q G+G+TN  L P   S+ L + QV ++A G +H++ +
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG      + + G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMCCMAVVDTGEV 226

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  Q+
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 25/211 (11%)

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
           G G    LAT+E G++ TWG       S L +G       P  + T  S   V++ A G 
Sbjct: 106 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGS 161

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
            H + +T  GEV+ WG+         +   GS  +  +    + +     +   +     
Sbjct: 162 YHSLVLTSDGEVFAWGYNN-------SGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214

Query: 174 EEVVKRRKTSSAREESEN-------PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
              +    T        N        +SG++    +PC V    G+++ +VA G  HTL+
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVACGYAHTLV 271

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
           L+D GQV+ WG    GQLG G++     PTP
Sbjct: 272 LTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 22/172 (12%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG-Y 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           +  GQ  L S  +  TP          V + A G+AH + +T+ G+VY WG         
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG--------- 282

Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
                  A S+ +  TG +S  + PT      D+           TS+A+ +
Sbjct: 283 -------ANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQ 327


>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Hydra magnipapillata]
          Length = 364

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 30/248 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   TL P ++       I ++A G G H L ++D G+++ WG+GG GQLG        
Sbjct: 57  GDGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLAVTDSGELYSWGHGGYGQLG-------- 108

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
                     H +  K +P+LV            +  V ++ACG  HS  +T+ G +  +
Sbjct: 109 ----------HTSEEKSKPVLVYM----------QKKVIQVACGSYHSIALTEDGEVYAW 148

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G    GQ G G +N+Q  P   S +   ++  ++ G   TV ++ +G +Y +G N  GQL
Sbjct: 149 GSNNCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNGNGQL 208

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
           G   +  +  P  +   +      K+V CG  H  VLT+ G++ SWG N YGQLGLG + 
Sbjct: 209 GIENNTNQLQPVRVTGSLFGKFIEKIV-CGMAHVLVLTDIGELYSWGANSYGQLGLGTTH 267

Query: 434 DRNIPSLV 441
           + ++P+L+
Sbjct: 268 NTSVPTLI 275



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 146/362 (40%), Gaps = 91/362 (25%)

Query: 11  NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
           NE +       VY  G+      G     S +   I  +LC  D  +   G G    LA 
Sbjct: 32  NEALLTLTNGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMG-PHVLAV 90

Query: 67  SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
           ++SG+L +WG     GQ   TS    E  +P  +  +  V++ A G  H +++TE GEVY
Sbjct: 91  TDSGELYSWGHGG-YGQLGHTSE---EKSKPVLVYMQKKVIQVACGSYHSIALTEDGEVY 146

Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
            WG   C          G  G            +   QA P  KR               
Sbjct: 147 AWGSNNC----------GQLG----------LGISNNQATP--KR--------------- 169

Query: 187 EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
                              V+L P  KI  V+ G   T++L+  G+++ WGY G GQLG+
Sbjct: 170 -------------------VSLIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNGNGQLGI 210

Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
            +      T  L P                   V  +G     ++++I CG  H  V+TD
Sbjct: 211 ENN-----TNQLQP-------------------VRVTGSLFGKFIEKIVCGMAHVLVLTD 246

Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC--ISVEGRVYV 364
            G L ++G   YGQ G G+T++   P+  ++  D +   IAA  ++ +   +++ G++Y+
Sbjct: 247 IGELYSWGANSYGQLGLGTTHNTSVPTLINTTTDDRWSDIAAHHYNHISAGVTISGKIYM 306

Query: 365 FG 366
           +G
Sbjct: 307 WG 308



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVCI 356
           G  + +    G +   G+   G  G G  +  L P     L    + Q+A G+  H + +
Sbjct: 31  GNEALLTLTNGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLAV 90

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARHSAVLTEDG 414
           +  G +Y +G   +GQLG   ++          P+L   + KV  V+CG+ HS  LTEDG
Sbjct: 91  TDSGELYSWGHGGYGQLGHTSEEKSK-------PVLVYMQKKVIQVACGSYHSIALTEDG 143

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIP---SLVPIHGFLPRNIACGWWHTLLL 461
           +V +WG N  GQLGLG S ++  P   SL+P    +  +++CG   T++L
Sbjct: 144 EVYAWGSNNCGQLGLGISNNQATPKRVSLIPSKKIV--SVSCGQSFTVML 191



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 3/109 (2%)

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            G VY  G N  G LG G   +   PK++E  + +    ++      H   +T+ G++ S
Sbjct: 40  NGDVYALGFNGNGCLGVGDGSSTLEPKIIE-QLCQKDIVQLAYGMGPHVLAVTDSGELYS 98

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           WG   YGQLG   S +++ P LV +   + + +ACG +H++ L E  ++
Sbjct: 99  WGHGGYGQLG-HTSEEKSKPVLVYMQKKVIQ-VACGSYHSIALTEDGEV 145


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G++ Q +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIECQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 110/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   +   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI------ 190

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
           P +                  ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 191 PFM------------------QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 117/288 (40%), Gaps = 41/288 (14%)

Query: 53  KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
           +++    CG A  LA ++ G++  WG  D +GQ  L   +     P      ++  +V+ 
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQV 142

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS----ALPTEQA 165
           A G+ H +++++A EV+ WG  +           G     QK ++ +       +P  Q 
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNK-------YGQLGLGIECQKQTSPQLIKSLLGIPFMQV 195

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
                 +    +        R +       DE     P L+      KI  +  G  HT 
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 255

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            L+  G V+ +G GG GQLG  S      T H I           R +    GS+     
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI----- 295

Query: 286 AGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                V +IACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 296 -----VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
 gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
          Length = 560

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 90  GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 144

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 145 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 184

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 185 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNG 244

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQ+ +WG N YGQLG G+
Sbjct: 245 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 302

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 303 KSNQSYPTPVVV 314



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 149 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 207

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 208 TGCLQNKV------------------------VMNIACGQMCSMAVVDTGEVYVWGYNGN 243

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG++Y +G N +GQLGTG  
Sbjct: 244 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 303

Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP++  K    ++ +C + H SA  T+ G V  WG
Sbjct: 304 SNQSYP----TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 344



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 3/172 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++A G +H++ +
Sbjct: 117 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 176

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   S  + + G+V
Sbjct: 177 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVMNIACGQMCSMAVVDTGEV 235

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  QI
Sbjct: 236 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQI 287



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 182 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 240

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G++Y WG
Sbjct: 241 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 291


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 126/249 (50%), Gaps = 30/249 (12%)

Query: 215  TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
            T V + G HTL +++ G+V+ WG G  G+LG G+  +                 + R + 
Sbjct: 1890 TSVGSDG-HTLAVTESGEVFSWGDGDYGKLGHGNSDR---------------QRRPRQIE 1933

Query: 275  VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
              QG            V +++CG +HSAVVT  G L TFG G YG+ G G+T ++  P+ 
Sbjct: 1934 ALQGE----------EVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTR 1983

Query: 335  ASSLMDIQVEQIAAGLWHTVCISVEG-RVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
              +L   Q+  +A GL HT+C+S +G  V+ FG   FG+LG G    +++P  ++   L+
Sbjct: 1984 VVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKA--LQ 2041

Query: 394  SKRAKVVSCGARHSAVLTEDGQVLSWGWNKY-GQLGLGDSIDRNIPSLVPIHGFLPRNIA 452
                K V+CG + S  L++ G+V +WG  +  GQ       +     +  + G+   ++ 
Sbjct: 2042 GHVIKKVACGTQFSVALSKYGKVFTWGQERLIGQPDTRGGSNCQPQEVASLSGYFIEDVV 2101

Query: 453  CGWWHTLLL 461
            CG  HTL+L
Sbjct: 2102 CGAEHTLVL 2110



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 136/287 (47%), Gaps = 35/287 (12%)

Query: 208  LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP---CLEH 264
            LN  V+I   A       ++    + + WG G  GQ+  G R   VP    +P   C + 
Sbjct: 1778 LNMDVQIMNWAMQKPEDWLIGGKCEAFLWGSGRNGQMCEGGRGAFVPVR--VPSFSCSQQ 1835

Query: 265  AASGKDRPLLV---------------RQGSVNSSGKAGRSYVKEI----------ACGGR 299
               G++   +V               R G  NS      + +  I          + G  
Sbjct: 1836 IVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSD 1895

Query: 300  -HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
             H+  VT++G + ++G G YG+ GHG+++ Q RP    +L   +V Q++ G  H+  ++ 
Sbjct: 1896 GHTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTA 1955

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG-QVL 417
            +G+++ FG   +G+LG G    + VP       LES +   V+CG  H+  ++ DG  V 
Sbjct: 1956 DGKLFTFGNGDYGRLGLGTTTNKKVPT--RVVALESHQIGYVACGLNHTLCVSADGTNVW 2013

Query: 418  SWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            ++G   +G+LG G+++ +++P+ +  + G + + +ACG   ++ L++
Sbjct: 2014 AFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSK 2060



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 137/332 (41%), Gaps = 89/332 (26%)

Query: 115  HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
            H ++VTE+GEV++WG            D+G  G    D   +   +   Q        GE
Sbjct: 1897 HTLAVTESGEVFSWG----------DGDYGKLGHGNSDRQRRPRQIEALQ--------GE 1938

Query: 175  EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
            EV+                                      +++ G +H+ +++  G+++
Sbjct: 1939 EVI--------------------------------------QLSCGFKHSAVVTADGKLF 1960

Query: 235  GWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
             +G G  G+LGLG+   K VPT   +  LE    G                         
Sbjct: 1961 TFGNGDYGRLGLGTTTNKKVPTR--VVALESHQIGY------------------------ 1994

Query: 294  IACGGRHSAVVT-DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            +ACG  H+  V+ D   +  FG G +G+ G G+T  +  P+   +L    ++++A G   
Sbjct: 1995 VACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQF 2054

Query: 353  TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
            +V +S  G+V+ +G  +   +G    +  +  +  E   L     + V CGA H+ VLT 
Sbjct: 2055 SVALSKYGKVFTWGQERL--IGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTS 2112

Query: 413  DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP 442
            DG V  WG N  GQLGLG  +S  R  P LVP
Sbjct: 2113 DGDVWGWGSNSEGQLGLGHTNSPVRE-PQLVP 2143



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 30/52 (57%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            G  I  V  G  HTL+L+  G VWGWG   EGQLGLG     V  P L+PCL
Sbjct: 2094 GYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTNSPVREPQLVPCL 2145


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D + +  PKLL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGLDCKKQASPKLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 172/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+            V R   S A                          
Sbjct: 111 DSDGQLGLLGSEECIR---------VPRNIKSLA-------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V    +L
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK-GNWL 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIV---QVACGYYHSLALSKASEV 158


>gi|325192607|emb|CCA27034.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 362

 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 38/238 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           ++  V+ G +H+L+++  G+ + WG G  G+LGLG+ I                      
Sbjct: 124 RVQSVSCGWKHSLLVTATGEAFAWGTGRHGELGLGTSILH-------------------- 163

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                 SVN +    R   +++ CG +HS  V+  G + + G   +GQ G   TND L P
Sbjct: 164 ------SVNPTRILTRQMFQQVHCGWQHSVFVSFDGKVSSCGSNKHGQLG---TNDSLAP 214

Query: 333 SYASSLM---------DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            Y+  L+          I V+QI+ G  H VCI++   V  +G    GQLG G+D     
Sbjct: 215 LYSPRLITTTESDEVKSIVVKQISVGWHHCVCITLGNEVLSWGKGSHGQLGIGLDDGAYT 274

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           P  +    ++ +    V+CG+ H+ +LT DG V S GW ++G LG G + + +IPS +
Sbjct: 275 PTSILIDPIKHRAISQVACGSEHTLLLTHDGSVYSCGWGEHGNLGHGTTTNEDIPSEI 332



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 64/108 (59%), Gaps = 2/108 (1%)

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPIL-ESKRAKVVSCGARHSAVLTEDG 414
           S E +V+ +G N+FGQLGT  +  + + P  +   +L +  R + VSCG +HS ++T  G
Sbjct: 83  SHEHKVFCWGSNKFGQLGTASEGIDVHCPTAINIYLLAQPYRVQSVSCGWKHSLLVTATG 142

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           +  +WG  ++G+LGLG SI  ++     +   + + + CGW H++ ++
Sbjct: 143 EAFAWGTGRHGELGLGTSILHSVNPTRILTRQMFQQVHCGWQHSVFVS 190



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 114/309 (36%), Gaps = 67/309 (21%)

Query: 66  TSESGKLITWGSADDEGQSYLTSGKHGETPEP---FPLPTEASVVKAAAGWAHCVSVTEA 122
           +S   K+  WGS         + G     P     + L     V   + GW H + VT  
Sbjct: 82  SSHEHKVFCWGSNKFGQLGTASEGIDVHCPTAINIYLLAQPYRVQSVSCGWKHSLLVTAT 141

Query: 123 GEVYTWG-------------WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           GE + WG                  P+  +TR       FQ+   G Q ++         
Sbjct: 142 GEAFAWGTGRHGELGLGTSILHSVNPTRILTRQM-----FQQVHCGWQHSVFVS------ 190

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-SPCLVTLN-----PGVKITKVAAGGRH 223
                     + +S    +     + D    L SP L+T         + + +++ G  H
Sbjct: 191 -------FDGKVSSCGSNKHGQLGTNDSLAPLYSPRLITTTESDEVKSIVVKQISVGWHH 243

Query: 224 TLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            + ++   +V  WG G  GQLG+G       PT  LI  ++H A                
Sbjct: 244 CVCITLGNEVLSWGKGSHGQLGIGLDDGAYTPTSILIDPIKHRA---------------- 287

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                   + ++ACG  H+ ++T  G++ + GWG +G  GHG+T ++  PS      D Q
Sbjct: 288 --------ISQVACGSEHTLLLTHDGSVYSCGWGEHGNLGHGTTTNEDIPSEILYFQDQQ 339

Query: 343 --VEQIAAG 349
             VE + AG
Sbjct: 340 LAVESVRAG 348



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 25/133 (18%)

Query: 357 SVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILE-------SKRAKVVSCGARHSA 408
           + +G+++ +G N   QLG G + Q+    ++  T IL         +    V+CG +++ 
Sbjct: 9   TADGKLFAWGSNDHHQLGIGTMMQSSGSDRVQRTNILAPCAANWVVRNVVAVACGWQNTI 68

Query: 409 VLT------------EDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIH----GFLPRNI 451
            +T             + +V  WG NK+GQLG   + ID + P+ + I+     +  +++
Sbjct: 69  AITGPVNLTEGTQSSHEHKVFCWGSNKFGQLGTASEGIDVHCPTAINIYLLAQPYRVQSV 128

Query: 452 ACGWWHTLLLAET 464
           +CGW H+LL+  T
Sbjct: 129 SCGWKHSLLVTAT 141


>gi|443692774|gb|ELT94295.1| hypothetical protein CAPTEDRAFT_179088 [Capitella teleta]
          Length = 394

 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 43/213 (20%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +K ++CG  H+ +++  G + TFG G  GQ GHG+   Q +P   ++L  + +  ++AG 
Sbjct: 177 IKSVSCGHEHTILLSKIGIVFTFGSGSRGQLGHGTIESQTQPQKVAALEGMSMTSVSAGG 236

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT---GVD----------------------------- 378
           WH+  +S  G +Y +G N+ GQLG    GV                              
Sbjct: 237 WHSAALSDIGDIYTWGWNERGQLGARSKGVKMKVEPESIESVRPAKIQKTQTGGIPSNYK 296

Query: 379 ---------QAENVPKLL--ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
                      +++P +L  E    E    K ++CG+RHSA +T+DG + SWG N YGQL
Sbjct: 297 DEEVNVETVNVQSIPSVLDVEDENHELLSFKDIACGSRHSAAVTDDGSLYSWGCNDYGQL 356

Query: 428 GLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           GLGD I R+ P+ V        ++ CG+W+T++
Sbjct: 357 GLGDRISRDSPTKVIHFSKNVIDVRCGYWNTIV 389



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 29/176 (16%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPC 261
           P  V    G+ +T V+AGG H+  LSD+G ++ WG+   GQLG  S+ +KM   P  I  
Sbjct: 218 PQKVAALEGMSMTSVSAGGWHSAALSDIGDIYTWGWNERGQLGARSKGVKMKVEPESIES 277

Query: 262 LEHAASGKDR----PLLVRQGSVNSSGKAGRSY---------------VKEIACGGRHSA 302
           +  A   K +    P   +   VN      +S                 K+IACG RHSA
Sbjct: 278 VRPAKIQKTQTGGIPSNYKDEEVNVETVNVQSIPSVLDVEDENHELLSFKDIACGSRHSA 337

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPS----YASSLMDIQVEQIAAGLWHTV 354
            VTD G+L ++G   YGQ G G    +  P+    ++ +++D++      G W+T+
Sbjct: 338 AVTDDGSLYSWGCNDYGQLGLGDRISRDSPTKVIHFSKNVIDVR-----CGYWNTI 388


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 142/313 (45%), Gaps = 24/313 (7%)

Query: 139 VTRDFGSAGSFQKDS---TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE-----ESE 190
           +T    + G F++++   T  ++ LP E++   D    +  ++              + E
Sbjct: 40  ITNLENTEGDFRREAALVTDYRTELPEEESEGYDYHMEKRYIRENIELQGSHVFMWGDGE 99

Query: 191 NPASGD--EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
           N   G+  E     P +V     V +   A G +HTL LS  G V   G    GQLG+G 
Sbjct: 100 NGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGD 159

Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
            +    TP   P  + +    D+   + Q   N  G         IA G  HS  + D G
Sbjct: 160 HMLSRSTPVSEPSKQKSL---DKLQAIIQSLNNIVG---------IAAGYYHSLALNDTG 207

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            + ++G G +G+ G GS  +   P + +SL + +V  IA G  HT  I+  G V+ +G  
Sbjct: 208 KIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKG 267

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             GQLG    + E  P+L     L    A+ + CG  H+ V+   GQ+ S G N +GQLG
Sbjct: 268 LRGQLGHKSVKEEFSPRL--NASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLG 325

Query: 429 LGDSIDRNIPSLV 441
           LGD+ DR IP+LV
Sbjct: 326 LGDATDRIIPTLV 338



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 149/369 (40%), Gaps = 84/369 (22%)

Query: 94   TPEPF-PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
            TP+     P+   +V+ A G  H ++ +  G VY WG            D G  GS +  
Sbjct: 1202 TPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWG----------AGDRGQLGSLENF 1251

Query: 153  STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
               K +     Q   + KR                          +F LS          
Sbjct: 1252 DCVKINYAFNPQPVLNLKR--------------------------YFILS---------- 1275

Query: 213  KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
                +A G  H + L+   QV  WG G  GQLGL   +    TP ++  L+         
Sbjct: 1276 ----IACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSK-GTPQMVKALD--------- 1321

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                          GR+  K I CGG HSA + ++G +L +G  +YGQ GHG T     P
Sbjct: 1322 --------------GRAPCK-ILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAP 1366

Query: 333  SYASSL-MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG--VDQAENVPKLLET 389
                 L ++ +V     G  HT+ + V  +V+  G N  GQLG        +NVP  +E 
Sbjct: 1367 RVNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEE 1426

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLP 448
              L  K    V+ G +HS  L+  G+V SWG + +GQLG     D+  P+ L+  H   P
Sbjct: 1427 --LNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPP 1484

Query: 449  --RNIACGW 455
              ++IACG+
Sbjct: 1485 DVKSIACGY 1493



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 105/229 (45%), Gaps = 30/229 (13%)

Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
           P+       L   + +LN    I  +AAG  H+L L+D G+++ WG G  G+LG+GS   
Sbjct: 171 PSKQKSLDKLQAIIQSLN---NIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDAN 227

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
              +P  +  L++                        S V  IACG  H+A +T  G + 
Sbjct: 228 -AESPRFVASLQN------------------------SKVVHIACGAHHTAAITTVGDVW 262

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           T+G GL GQ GH S  ++  P   +SL     ++I  G  HT+ I   G++Y  G N  G
Sbjct: 263 TWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHG 322

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           QLG G D  + +   L T     K   + + G R S  LT  G+V ++G
Sbjct: 323 QLGLG-DATDRIIPTLVTGFANEKVIDIDAKGCR-SIALTNTGKVFAFG 369



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 124/265 (46%), Gaps = 24/265 (9%)

Query: 202  SPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
            +P  +T  P   KI +VA G  H+L  S  G V+ WG G  GQLG         +     
Sbjct: 1202 TPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAGDRGQLG---------SLENFD 1252

Query: 261  CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            C++   +   +P+L             R ++  IACG  H+  +T    +L++G G +GQ
Sbjct: 1253 CVKINYAFNPQPVL----------NLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQ 1302

Query: 321  CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
             G      +  P    +L      +I  G WH+  I   G++ ++G N +GQLG G  ++
Sbjct: 1303 LGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKS 1362

Query: 381  ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIP 438
             + P++ +   LE K  +    GA H+ V+    +V + G N  GQLGL D     +N+P
Sbjct: 1363 CSAPRVNQYLRLEGK-VRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVP 1421

Query: 439  -SLVPIHGFLPRNIACGWWHTLLLA 462
             S+  ++G     +A G  H+L L+
Sbjct: 1422 VSIEELNGKNICQVAAGDQHSLALS 1446



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 127/271 (46%), Gaps = 42/271 (15%)

Query: 202  SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
            SP L+       I  ++A    +  ++D G ++  G    G+LGLG    M P P     
Sbjct: 1633 SPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLG---HMAPAP----- 1684

Query: 262  LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                      P+ +R  S+N+        + ++ACG  H   +T+   +  +G G +G  
Sbjct: 1685 ---------TPVEIR--SLNTVK------IMKVACGTYHCLALTEEKRVYAWGDGKWGNA 1727

Query: 322  GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQA 380
            G  +TND L P   SSL    +  + AG +H+  +S  G ++++G N  GQLG G    A
Sbjct: 1728 GVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAA 1787

Query: 381  ENVPKL---LETPILESKRAKVVSCGARHSAVLTE--DGQVLSWGWNKYGQLGLGDSIDR 435
            E+ P     L+  +++      VS GA HSAVL +     + + G N  GQLGLGD +DR
Sbjct: 1788 EDSPTKISNLDGVVMD------VSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDR 1841

Query: 436  NIPSLVPIHGFLPRNI---ACGWWHTLLLAE 463
            +  +L  +     R I   +CG  HT  +++
Sbjct: 1842 S--TLTAVDALDDRQIVSASCGAAHTAAVSQ 1870



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 6/164 (3%)

Query: 310  LLTFGWGLYGQCGHGSTNDQLRPSYASSL-MDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            + T+G G+ G+ GHG       P   +S   + ++ ++A G  H++  S +G VY +G  
Sbjct: 1181 IYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAG 1240

Query: 369  QFGQLGT--GVDQAENVPKLLETPILESKRAKVVS--CGARHSAVLTEDGQVLSWGWNKY 424
              GQLG+    D  +        P+L  KR  ++S  CG  H+  LT + QVLSWG  ++
Sbjct: 1241 DRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEF 1300

Query: 425  GQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            GQLGL  ++ +  P +V  + G  P  I CG WH+  + E+ +I
Sbjct: 1301 GQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKI 1344



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 178/488 (36%), Gaps = 98/488 (20%)

Query: 17  CKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDV---CGGGCGFALATSESGKLI 73
           C+   +   G +     E  P L+ IP R   G    D+         F  A S++G+L 
Sbjct: 354 CRSIALTNTGKVFAFGNETEPHLNRIP-RFVAGLPKSDLIIAVARTAHFDFAISDTGQLF 412

Query: 74  TWG--SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
            W   S+++E    L S                 VV+   G  H   +            
Sbjct: 413 RWRPFSSEEESSRMLES-----------FHAIKGVVRMFCGHNHMAVI------------ 449

Query: 132 ECVPSAKVTRDFGS---AGSFQKD-STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
            C P    T+   S   + SF  D S       P+E+  P+      E +    T   R+
Sbjct: 450 -CSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSEKILPA-LGTNTEYLDEFATVQVRD 507

Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITK---------------------VAAGGRHTLI 226
                  G  +         L  GV+ T+                     +A G   T  
Sbjct: 508 SPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAA 567

Query: 227 LSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCL------------EHAASGKDRPL 273
           L+D G+V+ WG   +G+LGLGS +   +  P L+  L             HAA   D   
Sbjct: 568 LTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHK 627

Query: 274 LVRQGSVNSSGKAG----RSY--------------VKEIACGGRHSAVVTDAGALLTFGW 315
               GS N+ G+ G     SY              ++ IACGG H+ + T+ G++++ G 
Sbjct: 628 FFVWGS-NTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686

Query: 316 GLYGQCGHGSTNDQLRPS----YASSLM----DIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G +GQ GHG        S    Y   ++    D  + +++AG   +  I+ +GR++ +G 
Sbjct: 687 GWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGK 746

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
               QLG    + E  P+  E       R   VS G  H   L   G   SWG    GQL
Sbjct: 747 GDEYQLGHESSKNEAYPR--EVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQL 804

Query: 428 GLGDSIDR 435
           G G+  +R
Sbjct: 805 GHGEMCER 812



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 176/444 (39%), Gaps = 64/444 (14%)

Query: 29  PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYL 86
           P + P K   L  + A +    S  ++ G   G+  +LA +++GK+ +WGS    G+  +
Sbjct: 167 PVSEPSKQKSLDKLQAII---QSLNNIVGIAAGYYHSLALNDTGKIFSWGSGS-WGKLGI 222

Query: 87  TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG--WRECVPSAKVTRDFG 144
            S  + E+P        + VV  A G  H  ++T  G+V+TWG   R  +    V  +F 
Sbjct: 223 GSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFS 282

Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
              +      G Q     +       R+G+        S           GD    + P 
Sbjct: 283 PRLNASLRKCGAQKIRCGDDHTLVILRSGQLY------SMGANTHGQLGLGDATDRIIPT 336

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLE 263
           LVT     K+  + A G  ++ L++ G+V+ +G   E  L    R +  +P   LI  + 
Sbjct: 337 LVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNRIPRFVAGLPKSDLIIAVA 396

Query: 264 HAA----SGKDRPLLVRQGSVNSSGKAGRSY--------VKEIACGGRHSAVVTDAGALL 311
             A    +  D   L R    +S  ++ R          V  + CG  H AV+       
Sbjct: 397 RTAHFDFAISDTGQLFRWRPFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEM-- 454

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYAS-----SLMDIQVEQIAAGL---------WHTVCIS 357
                    C     +     S++S     SL     E+I   L         + TV + 
Sbjct: 455 --------GCTQAMISRNKSTSFSSDISRASLEKFPSEKILPALGTNTEYLDEFATVQVR 506

Query: 358 V------EGRVYVFGGNQFGQLGTGVDQA---ENV--PKLLETPILESKRAKVVSCGARH 406
                  +G +Y +G   FG+LG GV+     E+V  PK +ET  L       ++CG   
Sbjct: 507 DSPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIET--LAKMSVVFIACGKDS 564

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLG 430
           +A LT+ G+V +WG +  G+LGLG
Sbjct: 565 TAALTDTGKVYTWGKSAQGKLGLG 588



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 108/267 (40%), Gaps = 29/267 (10%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
             L P  ++      I  V AGG H+  LS  G ++ WG    GQLGLG+      +P  I
Sbjct: 1735 VLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKI 1794

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA--LLTFGWGL 317
              L+                           V +++ G  HSAV+    +  L T G   
Sbjct: 1795 SNLD-------------------------GVVMDVSLGANHSAVLMQVTSPNLFTCGLNA 1829

Query: 318  YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
             GQ G G   D+   +   +L D Q+   + G  HT  +S  G +  +G  + GQLG   
Sbjct: 1830 NGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKA 1889

Query: 378  DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
              ++++   ++ P + +     V CG   + V++E G++   G+     LG   S  R  
Sbjct: 1890 GLSKDIENPVQLPAICNDPMVKVVCGQEVTIVVSEKGELYMAGYESTIGLGGNSSRRREF 1949

Query: 438  P-SLVPIHGFL-PRNIACGWWHTLLLA 462
              S   + G + P  IA G  H L L 
Sbjct: 1950 DVSFREVEGLIQPTQIAVGSVHVLALV 1976



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 128/335 (38%), Gaps = 59/335 (17%)

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
            G  Y  S +  + P+      + SVV  A G     ++T+ G+VYTWG      SA+  
Sbjct: 530 HGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWG-----KSAQGK 584

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS         GK  A+     P   +     VV   + S  R  +       +FF 
Sbjct: 585 LGLGS---------GKPLAIVV---PQLVQDLSSHVVC--QISLGRNHAACSTDMHKFFV 630

Query: 201 L------------------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                               P  +T      I  +A GG HTLI ++ G V   G G  G
Sbjct: 631 WGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHG 690

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           QLG G    +      +P  +    G                  G S++ +++ G   SA
Sbjct: 691 QLGHGDYESLTALSKTLPYFKKIVEG-----------------FGDSFIVKVSAGKESSA 733

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +T+ G L T+G G   Q GH S+ ++  P        I+V  ++ G  H + +   G  
Sbjct: 734 AITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLP 793

Query: 363 YVFGGNQFGQLGTG-VDQAENVPKLLETPILESKR 396
           Y +G    GQLG G + + E +P+    PI+  +R
Sbjct: 794 YSWGNGSAGQLGHGEMCERETLPR----PIMLCRR 824



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 13/170 (7%)

Query: 308 GALLTFGWGLYGQCGHG-----STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           G + T+G G++G+ GHG     S      P    +L  + V  IA G   T  ++  G+V
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574

Query: 363 YVFGGNQFGQLGTGVDQ--AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           Y +G +  G+LG G  +  A  VP+L++   L S     +S G  H+A  T+  +   WG
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQD--LSSHVVCQISLGRNHAACSTDMHKFFVWG 632

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFLP---RNIACGWWHTLLLAETTQI 467
            N +GQLG+   I   +P    I        R+IACG WHTL+   T  +
Sbjct: 633 SNTFGQLGI-PHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSV 681



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 91/235 (38%), Gaps = 30/235 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGK 269
            G  I +VAAG +H+L LS  G+VW WG    GQLG  +   K+ PT    P LE      
Sbjct: 1429 GKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPT----PLLERHKIPP 1484

Query: 270  DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            D                    VK IACG   SA ++  G + T+G G  G+ GH      
Sbjct: 1485 D--------------------VKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLT 1524

Query: 330  LRPSYASSLMDIQVEQIAAGLWHTVCISVEGR---VYVFGGNQFGQLGTGVDQAENVPKL 386
              PS        +V QIA G  H   I  + R   + + G +  G   T    +     +
Sbjct: 1525 YAPSLIKDFS--EVVQIACGFKHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSV 1582

Query: 387  LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              +    +         A  ++     G V  WG +  GQLG+        PSL+
Sbjct: 1583 SGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLM 1637



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 10/135 (7%)

Query: 342  QVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
              EQI   A   + V +  E  +Y +G    G+LG G     + P+ + T    + +   
Sbjct: 1159 HFEQIRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEI-TSFPSNTKIVE 1217

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID-------RNIPSLVPIHGFLPRNIA 452
            V+CG  HS   + DG V +WG    GQLG  ++ D        N   ++ +  +   +IA
Sbjct: 1218 VACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIA 1277

Query: 453  CGWWHTLLLAETTQI 467
            CG WH + L    Q+
Sbjct: 1278 CGRWHNMTLTSERQV 1292



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 53   KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVK 108
            + +    CG A   A S+ G LITWG+  + GQ  L +G   +   P  LP   +  +VK
Sbjct: 1853 RQIVSASCGAAHTAAVSQYGDLITWGNGRN-GQLGLKAGLSKDIENPVQLPAICNDPMVK 1911

Query: 109  AAAGWAHCVSVTEAGEVYTWGWRECV 134
               G    + V+E GE+Y  G+   +
Sbjct: 1912 VVCGQEVTIVVSEKGELYMAGYESTI 1937


>gi|422294826|gb|EKU22126.1| hect domain and rld 4, partial [Nannochloropsis gaditana CCMP526]
          Length = 516

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 126/269 (46%), Gaps = 25/269 (9%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V+L   ++  +V+ G +H L L + G V  WG G  GQLG G  +     P LI  L
Sbjct: 161 PSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSS-DRPRLIHHL 219

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           +    G DR                   V  +ACGG+HSAV T   ++  FG+  YGQ G
Sbjct: 220 DPPRLGGDR-------------------VVAVACGGQHSAVHTAGQSVFCFGFNRYGQVG 260

Query: 323 HGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            G   +++   RP   S +   Q+ Q+  G  HT  ++ +G+V+ +G + FG+LG   D 
Sbjct: 261 QGQACNKISTPRPVNMSGIGSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGL-PDP 319

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
            + V    E P         ++CG  H   L  DG+  +WG+   GQ GLG ++    P 
Sbjct: 320 KKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPR 379

Query: 440 LVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            V  + G     IACG W ++++ E  ++
Sbjct: 380 PVEGLEGSRIAQIACGAWWSMVVTEAGRL 408



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 20/127 (15%)

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           D  V+ IA G   T+ ++  G  Y        Q GT   +A   P  +   +    R   
Sbjct: 125 DGLVQDIACGATFTIALTSRGVPY--------QWGTVNGRAYPEPSRVSLGV--PLRCLQ 174

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN--------I 451
           VSCG +H+  L E G V SWG   +GQLG GD++  + P L  IH   P          +
Sbjct: 175 VSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRL--IHHLDPPRLGGDRVVAV 232

Query: 452 ACGWWHT 458
           ACG  H+
Sbjct: 233 ACGGQHS 239



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 65/167 (38%), Gaps = 35/167 (20%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
            L     G+   WG    EGQ  L +  H  TP P      + + + A G    + VTEA
Sbjct: 347 VLGLGVDGRAYAWGYGS-EGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEA 405

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP-TEQAPPSDKRAGEEVVKRRK 181
           G +YTWG             +G  G    +   + S LP  E  PP        V K   
Sbjct: 406 GRLYTWG-------------YGDGGWLGLE---RASKLPYVEPCPP--------VTKYGA 441

Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           T S            +F    P +V+    +++ KV AGG HT+I++
Sbjct: 442 TCSF---------DSDFNACLPAVVSTLSHLRVEKVVAGGGHTIIMA 479


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 137/286 (47%), Gaps = 44/286 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPTPHLIPCLEH 264
           K+  VA G  HTLI +  G+V+  G   EGQLGLG         R+    +   I  L  
Sbjct: 89  KVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKML-- 146

Query: 265 AASGKDRPLLVRQGSV-----NSSGKAG---RSYVKE------------IACGGRHSAVV 304
           AA       L   G +     N+ G+ G    S V              ++CG  HSA+V
Sbjct: 147 AAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQVSSPQEVSVGQPISWVSCGYYHSALV 206

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           T  GAL TFG    G+ G G+   QL     P    S+ +  V Q+A G  HTV ++ EG
Sbjct: 207 TVDGALYTFGERDSGKLGLGT--HQLPGHRVPQLVKSIKE-PVRQVACGGGHTVALA-EG 262

Query: 361 RVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
            VY FG  QFGQLG G    E+ VP+L+E    +  RA  V CG  H+AV+TEDG + ++
Sbjct: 263 NVYTFGLGQFGQLGHGTFIFESRVPRLVEH--FKKGRACQVVCGENHTAVITEDGLLYTF 320

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA---CGWWHTLLLA 462
           G  ++G+LGLG+    N         FL  N+    CG  H ++LA
Sbjct: 321 GDGRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCGGCHMVVLA 366



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 93/169 (55%), Gaps = 4/169 (2%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           IACG  H+A++T+ G L  FG   +GQ G GS     +P+   +L   +V+ +A G  HT
Sbjct: 41  IACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHT 100

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK-RAKVVSCGARHSAVLTE 412
           +  + +G+VY  GGN  GQLG G  +     K L+    +S+   K+++ G+  SA LT 
Sbjct: 101 LICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLD--FFDSQGPIKMLAAGSNTSAALTV 158

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
            G++  WG N  GQ+GLG     + P  V + G     ++CG++H+ L+
Sbjct: 159 SGKLFMWGDNTEGQIGLGKESQVSSPQEVSV-GQPISWVSCGYYHSALV 206



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 138/286 (48%), Gaps = 50/286 (17%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----AASGKD 270
           ++A G  HT ++++ G+++ +G    GQLGLGS++  V  P  +  L+       A G++
Sbjct: 40  RIACGDEHTALITENGKLFMFGSNNWGQLGLGSKV-TVNKPTCVKALKSEKVQLVACGRN 98

Query: 271 RPLL-VRQGSV-----NSSGKAG------------------RSYVKEIACGGRHSAVVTD 306
             L+   +G V     NS G+ G                  +  +K +A G   SA +T 
Sbjct: 99  HTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKMLAAGSNTSAALTV 158

Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ----IAAGLWHTVCISVEGRV 362
           +G L  +G    GQ G G      + S  SS  ++ V Q    ++ G +H+  ++V+G +
Sbjct: 159 SGKLFMWGDNTEGQIGLG------KESQVSSPQEVSVGQPISWVSCGYYHSALVTVDGAL 212

Query: 363 YVFGGNQFGQLGTGVDQ--AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           Y FG    G+LG G  Q     VP+L+++ I E  R   V+CG  H+  L E G V ++G
Sbjct: 213 YTFGERDSGKLGLGTHQLPGHRVPQLVKS-IKEPVRQ--VACGGGHTVALAE-GNVYTFG 268

Query: 421 WNKYGQLGLGDSI-DRNIPSLVPIHGFLPR--NIACGWWHTLLLAE 463
             ++GQLG G  I +  +P LV  H    R   + CG  HT ++ E
Sbjct: 269 LGQFGQLGHGTFIFESRVPRLVE-HFKKGRACQVVCGENHTAVITE 313



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 12/132 (9%)

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           + ++GA+ TFG   +         D + PS      DI + +IA G  HT  I+  G+++
Sbjct: 9   IPESGAVFTFGKSKFA--------DNI-PSKFWLKNDIPL-RIACGDEHTALITENGKLF 58

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
           +FG N +GQLG G     N P  ++   L+S++ ++V+CG  H+ + T  G+V + G N 
Sbjct: 59  MFGSNNWGQLGLGSKVTVNKPTCVKA--LKSEKVQLVACGRNHTLICTAKGKVYASGGNS 116

Query: 424 YGQLGLGDSIDR 435
            GQLGLGD  +R
Sbjct: 117 EGQLGLGDCEER 128


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 38/262 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ I K+A G  HT I+S  GQ++ +G G  G LG G  + +                  
Sbjct: 309 GISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVA----------------- 351

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD----------AGALLTFGWGLYGQ 320
           RP  V       S K  R+  K IACG  H+A + +          +G L T+G    G+
Sbjct: 352 RPKQVE------SLKGVRA--KAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGK 403

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GH     +L P+    L D    Q++     T+ +++ G V+  G  + G+LG  + + 
Sbjct: 404 LGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSED 463

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
            ++  L+E P L+++  + +S G+ H AVLT +G+V +WG    GQLGLGD +DR+ P+L
Sbjct: 464 TSIC-LIEGP-LKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTL 521

Query: 441 V-PIHGFLPRNIACGWWHTLLL 461
           V  +      +IACG+  T+ +
Sbjct: 522 VEALEDKQVHSIACGFNFTMAI 543



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ +ACG +H+A+VT  G + ++G    G+ GH  +     P    SL   +V+ IA G 
Sbjct: 205 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGA 264

Query: 351 WHTVCISVEGRVYVF--GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            HT  +S+ G +Y +  G +  G  G    +++  P  L  P L+      ++CG  H+A
Sbjct: 265 KHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGP-LDGISILKIACGHWHTA 323

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           +++  GQ+ ++G   +G LG GD++    P  V  + G   + IACG WHT  + E
Sbjct: 324 IISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVE 379



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 8/141 (5%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P   ++   I V+ +A G  H   ++ +G V+ +G +  G+LG  V  + + PK++E+  
Sbjct: 194 PRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIES-- 251

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRN--IPSLV--PIHGF 446
           L S R K ++ GA+H+  ++  G++  WG   +  LGL GD   R+   P  +  P+ G 
Sbjct: 252 LASTRVKAIAFGAKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGI 310

Query: 447 LPRNIACGWWHTLLLAETTQI 467
               IACG WHT +++   Q+
Sbjct: 311 SILKIACGHWHTAIISSAGQL 331


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 114/249 (45%), Gaps = 28/249 (11%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI             
Sbjct: 132 NIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 179

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLR 331
                       K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  
Sbjct: 180 ------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS 227

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P    SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +
Sbjct: 228 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESP--CHVKL 285

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRN 450
           L +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     
Sbjct: 286 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 345

Query: 451 IACGWWHTL 459
           IACG  HTL
Sbjct: 346 IACGRQHTL 354



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 132/327 (40%), Gaps = 83/327 (25%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
           +++    CG   +LA S+ G+L +WG+  D     +T+      P       + ++++ +
Sbjct: 131 QNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 190

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
            G  HC+++   G+ +TWG              G  G       GK+   P+ QA P   
Sbjct: 191 CGNWHCLALAADGQFFTWG----------KNSHGQLG------LGKE--FPS-QASPQRV 231

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
           R+ E                                    G+ + +VAAGG H+  LS  
Sbjct: 232 RSLE------------------------------------GIPLAQVAAGGAHSFALSLS 255

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G V+ WG    GQLGL                E   S     LL  Q  V          
Sbjct: 256 GAVFAWGMNNAGQLGLSDE-------------EDRESPCHVKLLRTQKVV---------- 292

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
              I+CG  H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G 
Sbjct: 293 --YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 350

Query: 351 WHTVC-ISVEGRVYVFGGNQFGQLGTG 376
            HT+  +   G +Y FG    GQLGTG
Sbjct: 351 QHTLAFVPSSGLIYAFGCGARGQLGTG 377



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 5/141 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           VKE+ACGG HS  + + G + T G    GQ GH    +  +P    +L D  +  +A G 
Sbjct: 83  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQNIVHVACGE 140

Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+++ +G    GQLG    + +  VP+L++   L  +    VSCG  H   
Sbjct: 141 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK--LNQQTILQVSCGNWHCLA 198

Query: 410 LTEDGQVLSWGWNKYGQLGLG 430
           L  DGQ  +WG N +GQLGLG
Sbjct: 199 LAADGQFFTWGKNSHGQLGLG 219



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 6/138 (4%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P     + D  V+++A G  H+V +  +G VY  G N  GQLG   ++  N P+  +   
Sbjct: 72  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPE--QIGA 127

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLV-PIHGFLPR 449
           L  +    V+CG  HS  L++ GQ+ SWG    GQLGL  + D   +P L+  ++     
Sbjct: 128 LADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 187

Query: 450 NIACGWWHTLLLAETTQI 467
            ++CG WH L LA   Q 
Sbjct: 188 QVSCGNWHCLALAADGQF 205



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 27/116 (23%)

Query: 366 GGNQFGQLGTGVDQAENVPKLLETP----ILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
            GN  G    G+  + N+  ++  P     +  +  K V+CG  HS  L EDG+V + G 
Sbjct: 50  NGNDLGASQPGI--STNLRGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 107

Query: 422 NKYGQLG----------LGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           N  GQLG          +G   D+NI     +H      +ACG  H+L L++  Q+
Sbjct: 108 NTKGQLGHEREGNKPEQIGALADQNI-----VH------VACGESHSLALSDRGQL 152


>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Mus musculus]
 gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
 gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Mus musculus]
 gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
 gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
          Length = 551

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQ+ +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVVV 305



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VMNIACGQMCSMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG++Y +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP++  K    ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 3/172 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++A G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   S  + + G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVMNIACGQMCSMAVVDTGEV 226

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  QI
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQI 278



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D + +  PKLL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGLDCKKQASPKLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 172/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+            V R   S A                          
Sbjct: 111 DSDGQLGLLGSEECIR---------VPRNIKSLA-------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V    +L
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK-GNWL 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIV---QVACGYYHSLALSKASEV 158


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 169/396 (42%), Gaps = 84/396 (21%)

Query: 53  KDV--CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEA--S 105
           +DV    GG   ++A + +G++  +G    EG++     +  E    P      T A   
Sbjct: 208 RDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPR 267

Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           V   A G  HC +VT +G + +WG  E          FG  G                Q 
Sbjct: 268 VATVACGQRHCAAVTTSGVLLSWGNEE----------FGQLG----------------QG 301

Query: 166 PPSD---KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
           PP D   K   + +++RR  +S                + P LV  +  VK T VA G  
Sbjct: 302 PPRDSSSKGDAKSLIRRRADAS----------------MMPRLVG-SGHVKFTSVACGAG 344

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           HTL L+  G+V+ +G G  G LG G R+     P L+  L                    
Sbjct: 345 HTLALTANGRVFSFGRGAFGALGHGDRLN-CDVPRLVDALWGVG---------------- 387

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD-- 340
                   V +IA G  HSA ++ +G + T+G G YG  GH   +++ RP+   +L D  
Sbjct: 388 --------VAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAG 439

Query: 341 IQVEQIAAGLWHTVCIS--VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
           ++ EQIA G  HT+ I+    G +  +G    G  GTG       P +++  +L  ++  
Sbjct: 440 VRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVF 499

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLG--LGDS 432
            +S G++HS  +TE G V +WG    GQLG  LGD+
Sbjct: 500 QISAGSKHSVAVTEGGCVYTWGARTQGQLGHELGDA 535



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 147/366 (40%), Gaps = 73/366 (19%)

Query: 87  TSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           TS    E  E +P P   S      V   A G  H V+VT AGEVY +G           
Sbjct: 185 TSRDSSEAAEAYPTPRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFG----------- 233

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
                      D +G+  AL    AP    R  E V+   + ++                
Sbjct: 234 -----------DCSGEGKAL---SAP---TRLREAVIDPPEVTA---------------- 260

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
                 T N   ++  VA G RH   ++  G +  WG    GQLG G            P
Sbjct: 261 ------TTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQG------------P 302

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGK-AGRSYVK--EIACGGRHSAVVTDAGALLTFGWGL 317
             + ++ G  + L+ R+   +   +  G  +VK   +ACG  H+  +T  G + +FG G 
Sbjct: 303 PRDSSSKGDAKSLIRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGA 362

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           +G  GHG   +   P    +L  + V QIAAG  H+  +S  GRVY +G  ++G LG   
Sbjct: 363 FGALGHGDRLNCDVPRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRD 422

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDR 435
               + P  ++       R + ++CG  H+  +   G   +L+WG    G  G G + D 
Sbjct: 423 VDNRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADV 482

Query: 436 NIPSLV 441
             P+++
Sbjct: 483 LTPTII 488



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 23/199 (11%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY-------ASSLMDIQV 343
           V  +A G RHS  VT AG +  FG    G+    S   +LR +        A++    +V
Sbjct: 210 VTHVAGGARHSVAVTSAGEVYAFG-DCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRV 268

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV---- 399
             +A G  H   ++  G +  +G  +FGQLG G  +  +     ++ I     A +    
Sbjct: 269 ATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRL 328

Query: 400 ----------VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
                     V+CGA H+  LT +G+V S+G   +G LG GD ++ ++P LV  + G   
Sbjct: 329 VGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDALWGVGV 388

Query: 449 RNIACGWWHTLLLAETTQI 467
             IA G  H+  L+ + ++
Sbjct: 389 AQIAAGDNHSASLSASGRV 407



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 33/163 (20%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P   SSL    V  +A G  H+V ++  G VY FG        +G  +A + P  L   +
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDC------SGEGKALSAPTRLREAV 252

Query: 392 LE----------SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR----NI 437
           ++            R   V+CG RH A +T  G +LSWG  ++GQLG G   D     + 
Sbjct: 253 IDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDA 312

Query: 438 PSLVPIHG---FLPR----------NIACGWWHTLLLAETTQI 467
            SL+        +PR          ++ACG  HTL L    ++
Sbjct: 313 KSLIRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGRV 355



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 15/104 (14%)

Query: 47  CGGDSWKDVCGGGCGFALA--TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
           CGGD    + GGG G  LA     SG   T  +AD    + +     G+           
Sbjct: 447 CGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDE---------- 496

Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
            V + +AG  H V+VTE G VYTWG R      ++  + G AG+
Sbjct: 497 KVFQISAGSKHSVAVTEGGCVYTWGART---QGQLGHELGDAGT 537


>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
 gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Rattus norvegicus]
 gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Rattus norvegicus]
          Length = 551

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQ+ +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVVV 305



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 113/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VMSIACGQMCSMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG++Y +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP++  K    ++ +C + H SA  ++ G V  WG
Sbjct: 295 SNQSYP----TPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 3/172 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++A G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   S  + + G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVMSIACGQMCSMAVVDTGEV 226

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  QI
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQI 278



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 98  GDVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT----- 152

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 153 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 192

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 193 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNG 252

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G     N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 253 QLGLG--SGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 310

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 311 KSNQSYPTPVIV 322



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 112/225 (49%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 157 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 215

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 216 TGCLQNKT------------------------VVNIACGQMCSMAVVDTGEVYVWGYNGN 251

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS  +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 252 GQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 311

Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP++  K    ++ +C + H SA  T+ G V  WG
Sbjct: 312 SNQSYP----TPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 352



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 115 KKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 174

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 175 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKTVVNIACGQMC 233

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  + + G+V  WG+N  GQLGLG   ++  P  +  + G   + +ACG+ HTL+L +  
Sbjct: 234 SMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 293

Query: 466 QI 467
           Q+
Sbjct: 294 QV 295



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 36/235 (15%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 106 PRRLDSLSGKKIACLSYGSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 161

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+              ++G     ST  
Sbjct: 162 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 208

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCL 205
           Q  +P         +    +   +  S A  ++        +G+    L       +PC 
Sbjct: 209 Q-PIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCR 267

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           +    G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++     PTP ++
Sbjct: 268 IAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVIV 322



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 4/111 (3%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 190 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWG-Y 248

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           +  GQ  L SG +  TP          V + A G+AH + +T+ G+VY WG
Sbjct: 249 NGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 299


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/268 (34%), Positives = 130/268 (48%), Gaps = 31/268 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLMPC---------------HISTNLSNKQ----VTEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPIHGFLPRNI-ACGWWHT 458
             +++ P+ V +       I AC   HT
Sbjct: 294 KSNQSYPAPVVVEKDRIIEIAACHLAHT 321



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 113/224 (50%), Gaps = 32/224 (14%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K +T+VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 140 LMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V + G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVNIACGQMCSMAVVNTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   S+L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPILESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P  +   ++E  R  ++ +C   H SA  T+ G V  WG
Sbjct: 295 SNQSYPAPV---VVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 335



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVVNIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
           S  +   G+V  WG+N  GQLGLG S ++  P  +  + G   + +ACG+ HTL+L +  
Sbjct: 217 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 41/227 (18%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLMPCH 144

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V + A G  H + +T  GEV+ WG+              ++G     ST  
Sbjct: 145 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 191

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
           Q  +P         +    +   +  S A   +                 +SG++    +
Sbjct: 192 Q-PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ---PT 247

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
           PC ++   G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++
Sbjct: 248 PCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A   +G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 551

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VTEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE-QIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  +  +V   IA G   ++ +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPAPVIV 305



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K A  ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVAVNIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  +   G+V  WG+N  GQLGLG S ++  P  +  + G   + +ACG+ HTL+L +  
Sbjct: 217 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 116/224 (51%), Gaps = 32/224 (14%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K +T+VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 140 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++  +            VN            IACG   S  V + G +  +G+   
Sbjct: 199 TGCLQNKVA------------VN------------IACGQMCSMAVVNTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPILESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P  +   I+E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYPAPV---IVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 96/238 (40%), Gaps = 42/238 (17%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 144

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V + A G  H + +T  GEV+ WG+              ++G     ST  
Sbjct: 145 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 191

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
           Q  +P         +    +   +  S A   +                 +SG++    +
Sbjct: 192 Q-PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ---PT 247

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           PC +    G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++     P P ++
Sbjct: 248 PCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIV 305



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K      CG   ++A   +G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 124/268 (46%), Gaps = 36/268 (13%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L TLN    +  V+ G  H+L +   G+V+ WG   EGQLG+G   +    P  I  L
Sbjct: 70  PALETLN----VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                  AG   + ++ACG  HS  +++ G + ++G   +GQ G
Sbjct: 126 -----------------------AGIKII-QVACGHYHSVALSEDGQVFSWGTNSHGQLG 161

Query: 323 HGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G     Q  P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        
Sbjct: 162 LGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALS---GN 218

Query: 382 NVPKLLETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           N P     P+    L++     +SCG +H+AVLT+DG+V ++G N YGQLG   + ++  
Sbjct: 219 NAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG 278

Query: 438 PSLVPIHGFLPRNIACGWWHTLLLAETT 465
           P LV     L   I CG  HTL    TT
Sbjct: 279 PQLVERIEGLVSQIDCGSDHTLAYIYTT 306



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T  P  +    G+KI +VA G  H++ LS+ GQV+ WG    GQLGLG       +P  +
Sbjct: 116 TFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW---- 315
             LE        PL                   ++A GG HS  ++ +G   +FGW    
Sbjct: 176 RSLEGI------PL------------------AQVAAGGHHSFALSLSGT--SFGWGSNS 209

Query: 316 -GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G     G+ +   + +P    +L  + V  I+ G  HT  ++ +G+V+ FG N +GQLG
Sbjct: 210 AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E   +E   ++ + CG+ H+ A +   GQV+S+G
Sbjct: 270 HDPTAEKRGPQLVER--IEGLVSQ-IDCGSDHTLAYIYTTGQVVSFG 313



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 135/343 (39%), Gaps = 98/343 (28%)

Query: 30  GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
           G  PE+ P L  +   L  CG +            +LA    G++  WG+A  EGQ  L 
Sbjct: 63  GEQPERIPALETLNVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108

Query: 88  SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
            G+  ET   P+         +++ A G  H V+++E G+V++WG          T   G
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG----------TNSHG 158

Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
             G       GK+   P+ QA P   R+ E                              
Sbjct: 159 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 179

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
                 G+ + +VAAGG H+  LS  G  +GWG    GQL L                  
Sbjct: 180 ------GIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL------------------ 215

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
             SG + P  V++    S G      V  I+CG +H+AV+T  G + TFG   YGQ GH 
Sbjct: 216 --SGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFG 366
            T ++  P     +  + V QI  G  HT+  I   G+V  FG
Sbjct: 272 PTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 9/165 (5%)

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
           +G  RPL  RQ        AG + + + A G  HS ++   G + + G    GQ G   T
Sbjct: 7   AGGRRPLRERQVC------AGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGT 60

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPK 385
               +P    +L  + V  ++ G  H++ +  +GRV+ +G    GQLG G   +   +PK
Sbjct: 61  PRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPK 120

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            ++T  L   +   V+CG  HS  L+EDGQV SWG N +GQLGLG
Sbjct: 121 KIKT--LAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG 163



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 6/126 (4%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCG 403
           Q A+G  H++ +  +G V   G N  GQLG  G  + E   ++   P LE+    +VSCG
Sbjct: 27  QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI---PALETLNVALVSCG 83

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLVP-IHGFLPRNIACGWWHTLLL 461
             HS  +   G+V +WG    GQLG+G+  +   IP  +  + G     +ACG +H++ L
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVAL 143

Query: 462 AETTQI 467
           +E  Q+
Sbjct: 144 SEDGQV 149


>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
 gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
          Length = 710

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 7/174 (4%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +ACG  H+A+VT+ G L TFG   +GQ G G T    +PS   SL   + + +A G  HT
Sbjct: 40  VACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           +  + +G+VYV+GG   GQLG G D  E   P LL+    +SK A  VSCG  H+AV+TE
Sbjct: 100 LIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLD---FDSK-AISVSCGYYHTAVVTE 155

Query: 413 DGQVLSWGWNKYGQLGLGDS-ID-RNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           DG + ++G  +YG+LGL +S +D  + P  V       + + CG  HT  +AE+
Sbjct: 156 DGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAES 209



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 117/260 (45%), Gaps = 43/260 (16%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           VA G  HTLI +  G+V+ WG G EGQLGLG        P L+     A S         
Sbjct: 92  VACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDSKAIS--------- 142

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYA 335
                            ++CG  H+AVVT+ G L TFG   YG+ G  +++ D       
Sbjct: 143 -----------------VSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQK 185

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---- 391
            + +  +V+ +  G  HT  I+  G VY FG    GQLG G         LLE+P     
Sbjct: 186 VTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGN-------SLLESPTPHRV 238

Query: 392 --LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS--IDRNIP-SLVPIHGF 446
                   K  SCG   +AV+T  G + ++G  ++G+LGLGD    ++  P  +   + F
Sbjct: 239 ERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKF 298

Query: 447 LPRNIACGWWHTLLLAETTQ 466
             + +ACG  H +++A   Q
Sbjct: 299 QVQWVACGGCHMMVIASPRQ 318



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 26/147 (17%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           K+  V  GG HT  +++ G V+ +G G  GQLG G+ +   PTPH +     A       
Sbjct: 192 KVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDAD------ 245

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG--STNDQL 330
                              K  +CG   +AV+T  G L TFG G +G+ G G  S  +Q 
Sbjct: 246 ------------------CKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQF 287

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCIS 357
           RP   +     QV+ +A G  H + I+
Sbjct: 288 RPFKVARFNKFQVQWVACGGCHMMVIA 314



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 13/102 (12%)

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G ++ FG ++F         AEN+        + + R   V+CG  H+A++TE+G++ ++
Sbjct: 12  GAIFTFGKSKF---------AENISSKF---WIRNDRICAVACGDEHTALVTENGRLYTF 59

Query: 420 GWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLL 460
           G N +GQLGLG +   + PS V  +     + +ACG  HTL+
Sbjct: 60  GSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHTLI 101


>gi|307106136|gb|EFN54383.1| hypothetical protein CHLNCDRAFT_13561, partial [Chlorella
           variabilis]
          Length = 171

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 91/171 (53%), Gaps = 2/171 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +ACG RHS  +   G  L +GW L+ QCG  + +  + PS   SL  +    +A G+ HT
Sbjct: 2   VACGARHSLALNALGQCLAWGWSLHVQCGKSAPSVPM-PSVVQSLGPLTCVGVAGGMGHT 60

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           V  + +G VY +G N  GQLG G D +   PKL+E   L S+    V+ G+RH+ +L   
Sbjct: 61  VVCTDQGDVYAWGLNGDGQLGDGSDVSALEPKLVEDAALASESVTKVAAGSRHTLLLCAS 120

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAE 463
           G   + GW  +GQLG G       P  V +  G    +IA GWWH+L+L E
Sbjct: 121 GSAFACGWGAFGQLGSGTFASSRTPQAVAVPAGTKVTDIAAGWWHSLILTE 171



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 23/141 (16%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           VA G  HT++ +D G V+ WG  G+GQLG GS +  +                  P LV 
Sbjct: 53  VAGGMGHTVVCTDQGDVYAWGLNGDGQLGDGSDVSAL-----------------EPKLVE 95

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
             ++ S        V ++A G RH+ ++  +G+    GWG +GQ G G+      P   +
Sbjct: 96  DAALASE------SVTKVAAGSRHTLLLCASGSAFACGWGAFGQLGSGTFASSRTPQAVA 149

Query: 337 SLMDIQVEQIAAGLWHTVCIS 357
                +V  IAAG WH++ ++
Sbjct: 150 VPAGTKVTDIAAGWWHSLILT 170



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 83/198 (41%), Gaps = 30/198 (15%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           VA G RH+L L+ +GQ   WG+    Q   G     VP P ++  L              
Sbjct: 2   VACGARHSLALNALGQCLAWGWSLHVQ--CGKSAPSVPMPSVVQSL-------------- 45

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA- 335
            G +   G AG         G  H+ V TD G +  +G    GQ G GS    L P    
Sbjct: 46  -GPLTCVGVAG---------GMGHTVVCTDQGDVYAWGLNGDGQLGDGSDVSALEPKLVE 95

Query: 336 -SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
            ++L    V ++AAG  HT+ +   G  +  G   FGQLG+G   +   P+ +  P    
Sbjct: 96  DAALASESVTKVAAGSRHTLLLCASGSAFACGWGAFGQLGSGTFASSRTPQAVAVP--AG 153

Query: 395 KRAKVVSCGARHSAVLTE 412
            +   ++ G  HS +LTE
Sbjct: 154 TKVTDIAAGWWHSLILTE 171



 Score = 38.1 bits (87), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
            +TKVAAG RHTL+L   G  +  G+G  GQLG G+
Sbjct: 103 SVTKVAAGSRHTLLLCASGSAFACGWGAFGQLGSGT 138


>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
 gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 2290

 Score =  112 bits (279), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 79/239 (33%), Positives = 110/239 (46%), Gaps = 43/239 (17%)

Query: 195 GDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IK 251
           G+E F     P  + + P  K  +VA G  H++ L+D GQ++ WG    GQLG G R  +
Sbjct: 322 GNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQ 381

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
           + PT  +I  +                               I  G +HSA ++D   L 
Sbjct: 382 LKPTMIIIEVM----------------------------ATSICSGDQHSAFISDEKELY 413

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           T+G G Y + GHG T D+L P     L D+ V  ++ G+ HT+ I+ EG VY +G    G
Sbjct: 414 TWGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSG 473

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           +LG    Q  N  K L  P         VS G  HS  LT+ G + SWG +K G LG+G
Sbjct: 474 KLGV---QENN--KSLHLPTR-------VSAGGLHSMALTDQGILYSWGSSKGGVLGIG 520



 Score =  109 bits (273), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 86/306 (28%), Positives = 143/306 (46%), Gaps = 37/306 (12%)

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDE----FFTLSPCLVTLNPGVK--ITKVAAGGRH 223
           +R G++  ++  TS + +E ++    +E    F         +N  +K  I  V+ G  H
Sbjct: 222 RRRGQK--QQENTSESEQEDDDQFQKNENAQSFVRSYVNKTEINEEIKDGIKHVSCGHHH 279

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           TL+++D G ++ +G G +G+L L    ++         L    S   +  L  +  VN  
Sbjct: 280 TLVITDQGTIFYFGMGTQGKLFLLRECQL---------LLQNKSKIQKGQLGNENFVNVY 330

Query: 284 GKA------GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
                     R ++ ++ACG  HS  +TD G + T+G    GQ G G  NDQL+P+    
Sbjct: 331 EPTELLVWPKRKFI-QVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMI-- 387

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           ++++    I +G  H+  IS E  +Y +G  Q+ +LG GV   E  PK  +  +LE    
Sbjct: 388 IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDELYPK--KVVVLEDVYV 445

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWH 457
             VSCG  H+  +T +G V +WG    G+LG    +  N  SL      LP  ++ G  H
Sbjct: 446 THVSCGMTHTLAITNEGFVYAWGDGMSGKLG----VQENNKSL-----HLPTRVSAGGLH 496

Query: 458 TLLLAE 463
           ++ L +
Sbjct: 497 SMALTD 502



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 24/146 (16%)

Query: 343 VEQIAAGLWHTVCISVEGRVYVFG----GNQF-----------------GQLGTGVDQAE 381
           ++ ++ G  HT+ I+ +G ++ FG    G  F                 GQLG   +   
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGN--ENFV 327

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           NV +  E  +   ++   V+CG+ HS  LT++GQ+ +WG N  GQLG G   D+  P+++
Sbjct: 328 NVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMI 387

Query: 442 PIHGFLPRNIACGWWHTLLLAETTQI 467
            I   +  +I  G  H+  +++  ++
Sbjct: 388 IIE-VMATSICSGDQHSAFISDEKEL 412



 Score = 50.8 bits (120), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 2/78 (2%)

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           H + IS +G  Y +G N++ QLG G + +  ++P+ ++   LE+KR  + +C  R SA+L
Sbjct: 800 HAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGA-LETKRIIMSTCSDRFSALL 858

Query: 411 TEDGQVLSWGWNKYGQLG 428
           T+ G++ ++G +  G LG
Sbjct: 859 TDKGEIWTFGTSDSGVLG 876



 Score = 48.9 bits (115), Expect = 0.005,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 93/244 (38%), Gaps = 67/244 (27%)

Query: 101 PTEASV------VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
           PTE  V      ++ A G +H +++T+ G+++TWG        K TR  G  G   ++  
Sbjct: 332 PTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWG--------KNTR--GQLGQGHRNDQ 381

Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD-EFFTLS---------PC 204
            K + +  E    S     +       ++   +E E    G+ ++F L          P 
Sbjct: 382 LKPTMIIIEVMATSICSGDQH------SAFISDEKELYTWGNGQYFRLGHGVTTDELYPK 435

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
            V +   V +T V+ G  HTL +++ G V+ WG G  G+LG+    K +  P        
Sbjct: 436 KVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENNKSLHLP-------- 487

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
                                        ++ GG HS  +TD G L ++G    G  G G
Sbjct: 488 ---------------------------TRVSAGGLHSMALTDQGILYSWGSSKGGVLGIG 520

Query: 325 STND 328
              D
Sbjct: 521 FQRD 524



 Score = 45.4 bits (106), Expect = 0.057,   Method: Composition-based stats.
 Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 26/167 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           KI  ++    H + +S  G  + WG     QLGLG   K    P  I             
Sbjct: 790 KIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKI------------- 836

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               QG++ +        +    C  R SA++TD G + TFG    G  GH   N  +  
Sbjct: 837 ----QGALETK------RIIMSTCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYV-V 885

Query: 333 SYASSLMDI-QVEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGV 377
           S    + DI  +  +A+G    + I+ + R +Y +G N +GQLG  +
Sbjct: 886 SEPKMINDIPPMIFLASGPQGMMAITEQKRQIYAWGNNLYGQLGIQI 932


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 123/256 (48%), Gaps = 39/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ I+ VA G  HT ++S  G+++ +G G  G LG G+ I +   P  +  L        
Sbjct: 406 GISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISL-SQPKEVESLNGLC---- 460

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD-----------AGALLTFGWGLYG 319
                               VK +ACG  H+A + D            G L T+G G  G
Sbjct: 461 --------------------VKSVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKG 500

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG    +L P+  + L+D    Q++ G   TV ++  GRVY  G +  GQLG    +
Sbjct: 501 KLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSR 560

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
             +V  ++E  + E +  K +S G+ H A LT  G+V +WG   +GQLGLGDS DRN+P+
Sbjct: 561 DASVA-IVEGKLKE-EFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPT 618

Query: 440 LVPIHGFLP-RNIACG 454
            V   G     +IACG
Sbjct: 619 FVEALGDKQVESIACG 634



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 95/179 (53%), Gaps = 10/179 (5%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ I+ GG+H+A++T  G + ++G G  G+ GH    D   P    SL  I  + +A G 
Sbjct: 302 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVACGE 361

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-----VPKLLETPILESKRAKVVSCGAR 405
           + T  ++  G VY +G ++F   G   D  EN     +P+ L  P L+      V+CG  
Sbjct: 362 YQTCALTKAGEVYTWGDSRF---GADFDCEENSRSRWLPQKLSGP-LKGISISNVACGEW 417

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           H+AV++  G++ ++G   +G LG G+ I  + P  V  ++G   +++ACG WHT  + +
Sbjct: 418 HTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVD 476



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 6/139 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S M + V+ I+ G  H   I+  G ++ +G  + G+LG  ++   + PKL+
Sbjct: 287 DALLPKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLV 346

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN--IPSLV--PI 443
           ++  L    AK V+CG   +  LT+ G+V +WG +++G     +   R+  +P  +  P+
Sbjct: 347 DS--LNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL 404

Query: 444 HGFLPRNIACGWWHTLLLA 462
            G    N+ACG WHT +++
Sbjct: 405 KGISISNVACGEWHTAVVS 423



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 40/212 (18%)

Query: 211 GVKITKVAAGGRHTLILSDM-----------GQVWGWGYGGEGQLGLG-SRIKMVPTPHL 258
           G+ +  VA G  HT  + D+           G+++ WG G +G+LG G +  K++PT   
Sbjct: 458 GLCVKSVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPT--- 514

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             C+         PL+                  +++CG   +  +T+ G + T G  ++
Sbjct: 515 --CVA--------PLV-------------DCDFAQVSCGRMLTVGLTNMGRVYTMGSSIH 551

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G+ S+ D         L +  V+ I++G +H   ++  GRVY +G    GQLG G  
Sbjct: 552 GQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDS 611

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              N+P  +E   L  K+ + ++CG+  +A +
Sbjct: 612 DDRNLPTFVEA--LGDKQVESIACGSNFTAAI 641



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD    L P  V         +V+ G   T+ L++MG+V+  G    GQLG         
Sbjct: 505 GDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLG--------- 555

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       S +D  + + +G      K    +VK I+ G  H A +T  G + T+G
Sbjct: 556 ----------NLSSRDASVAIVEG------KLKEEFVKAISSGSYHVASLTSTGRVYTWG 599

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            G +GQ G G ++D+  P++  +L D QVE IA G   T  I +   +
Sbjct: 600 KGAHGQLGLGDSDDRNLPTFVEALGDKQVESIACGSNFTAAICLHRSI 647


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 124/268 (46%), Gaps = 36/268 (13%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L TLN    +  V+ G  H+L +   G+V+ WG   EGQLG+G   +    P  I  L
Sbjct: 70  PALETLN----VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                  AG   + ++ACG  HS  +++ G + ++G   +GQ G
Sbjct: 126 -----------------------AGIKII-QVACGHYHSVALSEDGQVFSWGTNSHGQLG 161

Query: 323 HGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G     Q  P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        
Sbjct: 162 LGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALS---GN 218

Query: 382 NVPKLLETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           N P     P+    L++     +SCG +H+AVLT+DG+V ++G N YGQLG   + ++  
Sbjct: 219 NAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG 278

Query: 438 PSLVPIHGFLPRNIACGWWHTLLLAETT 465
           P LV     L   I CG  HTL    TT
Sbjct: 279 PQLVERIEGLVSQIDCGSDHTLAYIYTT 306



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T  P  +    G+KI +VA G  H++ LS+ GQV+ WG    GQLGLG       +P  +
Sbjct: 116 TFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW---- 315
             LE        PL                   ++A GG HS  ++ +G   +FGW    
Sbjct: 176 RSLEGI------PL------------------AQVAAGGHHSFALSLSGT--SFGWGSNS 209

Query: 316 -GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G     G+ +   + +P    +L  + V  I+ G  HT  ++ +G+V+ FG N +GQLG
Sbjct: 210 AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E   +E   ++ + CG+ H+ A +   GQV+S+G
Sbjct: 270 HDPTAEKRGPQLVER--IEGLVSQ-IDCGSDHTLAYIYTTGQVVSFG 313



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 135/343 (39%), Gaps = 98/343 (28%)

Query: 30  GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
           G  PE+ P L  +   L  CG +            +LA    G++  WG+A  EGQ  L 
Sbjct: 63  GEQPERIPALETLNVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108

Query: 88  SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
            G+  ET   P+         +++ A G  H V+++E G+V++WG          T   G
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG----------TNSHG 158

Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
             G       GK+   P+ QA P   R+ E                              
Sbjct: 159 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 179

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
                 G+ + +VAAGG H+  LS  G  +GWG    GQL L                  
Sbjct: 180 ------GIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL------------------ 215

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
             SG + P  V++    S G      V  I+CG +H+AV+T  G + TFG   YGQ GH 
Sbjct: 216 --SGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFG 366
            T ++  P     +  + V QI  G  HT+  I   G+V  FG
Sbjct: 272 PTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 9/165 (5%)

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
           +G  RPL  RQ        AG + + + A G  HS ++   G + + G    GQ G   T
Sbjct: 7   AGGRRPLRERQVC------AGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGT 60

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPK 385
               +P    +L  + V  ++ G  H++ +  +GRV+ +G    GQLG G   +   +PK
Sbjct: 61  PRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPK 120

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            ++T  L   +   V+CG  HS  L+EDGQV SWG N +GQLGLG
Sbjct: 121 KIKT--LAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG 163



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 6/126 (4%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCG 403
           Q A+G  H++ +  +G V   G N  GQLG  G  + E   ++   P LE+    +VSCG
Sbjct: 27  QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI---PALETLNVALVSCG 83

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLVP-IHGFLPRNIACGWWHTLLL 461
             HS  +   G+V +WG    GQLG+G+  +   IP  +  + G     +ACG +H++ L
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVAL 143

Query: 462 AETTQI 467
           +E  Q+
Sbjct: 144 SEDGQV 149


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 132/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------ 264
             + + +VA G +    ++  G+V+  G    G+LGLG     VP P  I  L        
Sbjct: 2216 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKV 2275

Query: 265  --AASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 2276 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 2335

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 2336 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2395

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  N+P+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 2396 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 2453

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + +  Q+
Sbjct: 2454 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQV 2503



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 2272 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 2314

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 2315 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 2366

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 2367 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 2426

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 2427 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 2484

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 2485 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 2544

Query: 457  HTL 459
            H++
Sbjct: 2545 HSV 2547



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 3254 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3313

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 3314 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVV 3373

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 3374 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3433

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 3434 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 3491

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG   +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 3492 TEDGS-YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3540



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 142/351 (40%), Gaps = 74/351 (21%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 3269 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 3328

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 3329 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVDALQGHRV 3372

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              VA  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 3373 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 3415

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 3416 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 3467

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G  Y +G N  GQLG G   A   P+L+    L
Sbjct: 3468 RQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDNDEGQLGDGTTNAIQRPRLVAA--L 3524

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 3525 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 3559



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2223 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 2280

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 2281 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 2330

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 2331 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 2390

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 2391 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 2431

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 2432 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 2485

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 2486 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 2543

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 2544 SHSVAWT 2550



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C   AA    RP+ +  G     +V + 
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----CEALAAL---RPVQLIGGEQTLFAVTAD 3230

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 3231 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3290

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 3291 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3350

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL++   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 3351 GHSDSEDQLKPKLVDA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3408

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 3409 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3442



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 35/241 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            +V+ WG   + QLG   GS+IK       +P      S  +                   
Sbjct: 2185 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2218

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
             V ++A G +    VT  G +   G    G+ G G ++  +  P   ++L    V+++A 
Sbjct: 2219 -VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2277

Query: 348  -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
             +G  H   ++V+G+V+ +G    G+LG       + P+L+E   L++KR + ++CG+ H
Sbjct: 2278 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 2335

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
            SA LT  G++ +WG  +YG+LG GD+  +  P +V +  G     +ACG      LA T 
Sbjct: 2336 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2395

Query: 466  Q 466
            +
Sbjct: 2396 E 2396



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 3268 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 3319

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   VT AG++YTWG
Sbjct: 3320 VVDVAAGGAHSACVTAAGDLYTWG 3343


>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
           troglodytes]
          Length = 552

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 84  GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 138

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 139 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 178

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 179 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 238

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 239 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 296

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 297 KSNQSYPTPVTV 308



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 143 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 201

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 202 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 237

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 238 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 297

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 298 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 338



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 101 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 160

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 161 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 219

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 220 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 279

Query: 466 QI 467
           Q+
Sbjct: 280 QV 281



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 128/331 (38%), Gaps = 91/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 92  PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 147

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 148 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 186

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             +  T   P          + RR T   + +                         +  
Sbjct: 187 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 212

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G    + + D G+V+ WGY G GQLGLG+     PTP  +  L+           +R
Sbjct: 213 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PTPCRVAALQG----------IR 261

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +
Sbjct: 262 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT 307

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 308 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 338



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 176 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 234

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 235 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 285


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 124/268 (46%), Gaps = 36/268 (13%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L TLN    +  V+ G  H+L +   G+V+ WG   EGQLG+G   +    P  I  L
Sbjct: 70  PALETLN----VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                  AG   + ++ACG  HS  +++ G + ++G   +GQ G
Sbjct: 126 -----------------------AGIKII-QVACGHYHSVALSEDGQVFSWGTNSHGQLG 161

Query: 323 HGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G     Q  P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        
Sbjct: 162 LGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALS---GN 218

Query: 382 NVPKLLETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           N P     P+    L++     +SCG +H+AVLT+DG+V ++G N YGQLG   + ++  
Sbjct: 219 NAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG 278

Query: 438 PSLVPIHGFLPRNIACGWWHTLLLAETT 465
           P LV     L   I CG  HTL    TT
Sbjct: 279 PQLVERIEGLVSQIDCGSDHTLAYIYTT 306



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T  P  +    G+KI +VA G  H++ LS+ GQV+ WG    GQLGLG       +P  +
Sbjct: 116 TFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW---- 315
             LE        PL                   ++A GG HS  ++ +G   +FGW    
Sbjct: 176 RSLEGI------PL------------------AQVAAGGHHSFALSLSGT--SFGWGSNS 209

Query: 316 -GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G     G+ +   + +P    +L  + V  I+ G  HT  ++ +G+V+ FG N +GQLG
Sbjct: 210 AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E   +E   ++ + CG+ H+ A +   GQV+S+G
Sbjct: 270 HDPTAEKRGPQLVER--IEGLVSQ-IDCGSDHTLAYIYTTGQVVSFG 313



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 135/343 (39%), Gaps = 98/343 (28%)

Query: 30  GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
           G  PE+ P L  +   L  CG +            +LA    G++  WG+A  EGQ  L 
Sbjct: 63  GEQPERIPALETLNVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108

Query: 88  SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
            G+  ET   P+         +++ A G  H V+++E G+V++WG          T   G
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG----------TNSHG 158

Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
             G       GK+   P+ QA P   R+ E                              
Sbjct: 159 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 179

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
                 G+ + +VAAGG H+  LS  G  +GWG    GQL L                  
Sbjct: 180 ------GIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL------------------ 215

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
             SG + P  V++    S G      V  I+CG +H+AV+T  G + TFG   YGQ GH 
Sbjct: 216 --SGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFG 366
            T ++  P     +  + V QI  G  HT+  I   G+V  FG
Sbjct: 272 PTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 9/165 (5%)

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
           +G  RPL  RQ        AG + + + A G  HS ++   G + + G    GQ G   T
Sbjct: 7   AGGRRPLRERQVC------AGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGT 60

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPK 385
               +P    +L  + V  ++ G  H++ +  +GRV+ +G    GQLG G   +   +PK
Sbjct: 61  PRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPK 120

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            ++T  L   +   V+CG  HS  L+EDGQV SWG N +GQLGLG
Sbjct: 121 KIKT--LAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG 163



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 6/126 (4%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCG 403
           Q A+G  H++ +  +G V   G N  GQLG  G  + E   ++   P LE+    +VSCG
Sbjct: 27  QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI---PALETLNVALVSCG 83

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLVP-IHGFLPRNIACGWWHTLLL 461
             HS  +   G+V +WG    GQLG+G+  +   IP  +  + G     +ACG +H++ L
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVAL 143

Query: 462 AETTQI 467
           +E  Q+
Sbjct: 144 SEDGQV 149


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 121/256 (47%), Gaps = 41/256 (16%)

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
           + L   +KI  V  G  H LILS  G+ + + Y                       +EHA
Sbjct: 1   IKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYS----------------------IEHA 38

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                   ++++ S+            +I CG  HS  ++  G L  +G  L+GQ G G 
Sbjct: 39  RF----QCILQEKSI-----------IQITCGDYHSLALSKGGELFAWGQNLHGQLGIGR 83

Query: 326 TNDQL-RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
               +  P     L  + + QI+AG  H++ +S+ G +Y +G N  GQLG G    E  P
Sbjct: 84  LFASIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFP 143

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PI 443
            L+E   L+S++ + ++CG  H+A+LTEDGQV ++G  K+GQLG   + +   P LV  +
Sbjct: 144 SLVEA--LDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTEL 201

Query: 444 HGFLPRNIACGWWHTL 459
            G     +ACG  HTL
Sbjct: 202 TGIRVTQVACGRRHTL 217



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 33/256 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI------PCLEHAAS 267
           I ++  G  H+L LS  G+++ WG    GQLG+G     +PTP L+      P ++ +A 
Sbjct: 49  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108

Query: 268 GKDRPLLVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVVT 305
                 L   G++     N  G+ G  +                 V+ +ACGG H+A++T
Sbjct: 109 KAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLT 168

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYV 364
           + G + TFG G +GQ GH ST ++LRP   + L  I+V Q+A G  HT+  +S  G+V+ 
Sbjct: 169 EDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDLGKVFS 228

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           FG  + GQLG G    + +P  ++ P  E  + +  +       +   +  +L W   K 
Sbjct: 229 FGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLKFESRTSEKELIMIAGGNQSILLWMGKKN 288

Query: 425 GQLGLGDSIDRNIPSL 440
             + L     R IP+L
Sbjct: 289 PYVNL----RRKIPTL 300



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 12/140 (8%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLE---- 388
           +   L +  + QI  G +H++ +S  G ++ +G N  GQLG G +  +   P+L+E    
Sbjct: 40  FQCILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSG 99

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
            P+++      +S G  HS  L+  G + SWG N  GQLGLG +     PSLV  +    
Sbjct: 100 VPLVQ------ISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQK 153

Query: 448 PRNIACGWWHTLLLAETTQI 467
              +ACG  HT LL E  Q+
Sbjct: 154 VEFLACGGSHTALLTEDGQV 173



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 52/237 (21%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVV 107
           K +    CG   +LA S+ G+L  WG  +  GQ  L  G+      TP+     +   +V
Sbjct: 47  KSIIQITCGDYHSLALSKGGELFAWGQ-NLHGQ--LGIGRLFASIPTPQLVEHLSGVPLV 103

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR-------------------ECVPSAKVTRDFGSAGS 148
           + +AG AH ++++ +G +Y+WG                     E + S KV  +F + G 
Sbjct: 104 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKV--EFLACG- 160

Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
                 G  +AL TE        AG    K  +      ++E          L P LVT 
Sbjct: 161 ------GSHTALLTEDGQVFTFGAG----KHGQLGHNSTQNE----------LRPRLVTE 200

Query: 209 NPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPCLE 263
             G+++T+VA G RHTL  +SD+G+V+ +G G EGQLG  G+  +++P P  +P  E
Sbjct: 201 LTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNE 257


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 159/379 (41%), Gaps = 95/379 (25%)

Query: 97  PFP---LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
           P P   LP  AS + AAAGW     +T   E+Y WG                       S
Sbjct: 77  PVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWG-----------------------S 113

Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
           +G  + LP  +    DKR                               P L      + 
Sbjct: 114 SGVYALLPMRR----DKR----------------------------IYYPTLCEPAQSLG 141

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I K+  G +H + LS  G+V+ WG    GQ GLG++       HL   +E     +D+ +
Sbjct: 142 IVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNK----EAQHLPIRMEFF---RDKSI 194

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           +                  +++CG  HSA V+  G + T+G+G+ GQ GH  T D+L+P 
Sbjct: 195 V------------------DVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPK 236

Query: 334 YASSLMDIQVEQIAAGLWHTVCIS-VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
             + +    + ++  G   T  ++  EGR++ FG  + GQLG G          LE  ++
Sbjct: 237 ELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHG-----ERGLCLEPSVV 291

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID----RNIPSLVPIHGFLP 448
                K V+ G  H   LT+DGQ  SWGW + G+LG G + D      IP+L P  G + 
Sbjct: 292 PLDNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVV- 350

Query: 449 RNIACGWWHTLLLAETTQI 467
            +++ G  H+L L E+ Q+
Sbjct: 351 -SVSAGGGHSLALTESGQV 368



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 39/298 (13%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
           +A S++G++  WG+++  GQ+ L + +    P       + S+V  + G  H  +V++ G
Sbjct: 153 IALSKNGEVYIWGNSE-FGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDG 211

Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP----SDKRAGEEVVKR 179
            V+TWG+        +    G  G+  +    + + +  E        +D        + 
Sbjct: 212 RVWTWGY-------GIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEG 264

Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
           R  +    E+     G+    L P +V L+    + +VAAGG H L L+  GQ W WG+G
Sbjct: 265 RLFTFGNGEAGQLGHGERGLCLEPSVVPLD---NVKEVAAGGAHMLALTKDGQAWSWGWG 321

Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
            +G+LG G+    +  P  IP L  A                         V  ++ GG 
Sbjct: 322 EDGRLGHGATEDFL-KPEPIPTLGPAVG-----------------------VVSVSAGGG 357

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           HS  +T++G +  +G+   G+ G G+ +  + P+   +L D +V +   GL H++ I+
Sbjct: 358 HSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLFIT 415



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 110/272 (40%), Gaps = 76/272 (27%)

Query: 18  KETVVYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
           K+  V+ WGY         GT  E    L P    +  G+    V  G     L     G
Sbjct: 209 KDGRVWTWGYGIDGQLGHNGTEDE----LKPKELTVIRGEGISRVTCGTDFTGLLNETEG 264

Query: 71  KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
           +L T+G+ +  GQ  L  G+ G   EP  +P + +V + AAG AH +++T+ G+ ++WGW
Sbjct: 265 RLFTFGNGE-AGQ--LGHGERGLCLEPSVVPLD-NVKEVAAGGAHMLALTKDGQAWSWGW 320

Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
            E                                    D R G                 
Sbjct: 321 GE------------------------------------DGRLGH---------------- 328

Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
              + ++F    P + TL P V +  V+AGG H+L L++ GQV+GWG+   G+LGLG+  
Sbjct: 329 --GATEDFLKPEP-IPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNE- 384

Query: 251 KMVPTPHLIPCLE-----HAASGKDRPLLVRQ 277
             V TP LI  L       A  G D  L + Q
Sbjct: 385 SSVMTPTLIKALADKRVLRAICGLDHSLFITQ 416


>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 558

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 120/272 (44%), Gaps = 31/272 (11%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-----MVPTPH 257
           P  V L  G  +  VAAG RH++ L+  G V  WG   EGQLG G+         V  P 
Sbjct: 78  PIAVRLPTGTTVAAVAAGDRHSVALTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVSLPS 137

Query: 258 LIPCLEHAASGKDRPLLVRQGSV-----NSSGKAG-----------------RSYVKEIA 295
            I  +  A        L   GS+     N +G+ G                  + V  IA
Sbjct: 138 GIRIVAVAVGADHSLALTSTGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIA 197

Query: 296 CGGRHSAVVTDAG--ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
            G  H+ V+T  G  ALL +G    GQ G G+  D+ RP   +    + V  IA G  H+
Sbjct: 198 AGRDHNLVLTATGPAALLAWGANREGQLGDGTVVDRSRPVPVNLPTGLTVTAIAGGRDHS 257

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           + ++ +  V  +GGN  GQLG G      +P  +  P+     A  ++ G  HS  LT D
Sbjct: 258 LALTSDDTVLAWGGNSHGQLGDGTTTGSLLPVTVVLPV--GAEATAIAAGRLHSLALTSD 315

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG 445
           G  L+WG N +GQLG G + D + P  V + G
Sbjct: 316 GTALAWGGNHWGQLGNGSTSDSSEPVAVSLPG 347



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 169/408 (41%), Gaps = 58/408 (14%)

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVSVTEAGEVY 126
           S  ++ WG  +D GQ  L  G   ++ EP    LPT  +V   AAG  H V++T AG V 
Sbjct: 53  SDAILAWG-GNDGGQ--LGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAGTVL 109

Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR------AGEEVVKRR 180
            WG              G  G+    S+G+    P   + PS  R        +  +   
Sbjct: 110 AWGRNT----------EGQLGNGTTTSSGE----PVAVSLPSGIRIVAVAVGADHSLALT 155

Query: 181 KTSSAREESENPAS--GDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSDMG--QVW 234
            T S      N     GD   T S  P  V L P   +  +AAG  H L+L+  G   + 
Sbjct: 156 STGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPAALL 215

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
            WG   EGQLG G+ +                  + RP+ V           G + V  I
Sbjct: 216 AWGANREGQLGDGTVVD-----------------RSRPVPVNL-------PTGLT-VTAI 250

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           A G  HS  +T    +L +G   +GQ G G+T   L P      +  +   IAAG  H++
Sbjct: 251 AGGRDHSLALTSDDTVLAWGGNSHGQLGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSL 310

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
            ++ +G    +GGN +GQLG G     + P  +  P   ++   + S  + H+  +T +G
Sbjct: 311 ALTSDGTALAWGGNHWGQLGNGSTSDSSEPVAVSLPG-GTRLISIASRDSDHNVAITTEG 369

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLL 461
             L+WG N  G LG G + D   P  V +  G    +IA G  H+L L
Sbjct: 370 AALAWGLNSQGHLGDGTTTDSATPVAVSLPAGAALTSIAVGDDHSLAL 417



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 36/241 (14%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           ++SD   +  WG    GQLG G+                       P+ VR  +      
Sbjct: 51  VMSD--AILAWGGNDGGQLGDGTTTD-----------------SSEPIAVRLPT------ 85

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
              + V  +A G RHS  +T AG +L +G    GQ G+G+T     P   S    I++  
Sbjct: 86  --GTTVAAVAAGDRHSVALTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVSLPSGIRIVA 143

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           +A G  H++ ++  G +  +G N  GQLG G   + + P  +  P   +     ++ G  
Sbjct: 144 VAVGADHSLALTSTGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLP--PNTTVAAIAAGRD 201

Query: 406 HSAVLTEDG--QVLSWGWNKYGQLGLGDSIDRNIPSLVPIH---GFLPRNIACGWWHTLL 460
           H+ VLT  G   +L+WG N+ GQLG G  +DR+ P  VP++   G     IA G  H+L 
Sbjct: 202 HNLVLTATGPAALLAWGANREGQLGDGTVVDRSRP--VPVNLPTGLTVTAIAGGRDHSLA 259

Query: 461 L 461
           L
Sbjct: 260 L 260



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 138/356 (38%), Gaps = 50/356 (14%)

Query: 41  PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP- 99
           PI  RL  G +   V  G    ++A + +G ++ WG  + EGQ  L +G    + EP   
Sbjct: 78  PIAVRLPTGTTVAAVAAGDR-HSVALTSAGTVLAWGR-NTEGQ--LGNGTTTSSGEPVAV 133

Query: 100 -LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
            LP+   +V  A G  H +++T  G +  WG  +       T   G  GS    ST    
Sbjct: 134 SLPSGIRIVAVAVGADHSLALTSTGSLLAWGSND-------TGQLGD-GSVTSSSTPVAV 185

Query: 159 ALP--TEQAPPSDKRAGEEVVKRRKTSS-----AREESENPASGDEFFTLSPCLVTLNPG 211
            LP  T  A  +  R    V+     ++     A  E +    G       P  V L  G
Sbjct: 186 RLPPNTTVAAIAAGRDHNLVLTATGPAALLAWGANREGQL-GDGTVVDRSRPVPVNLPTG 244

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHA---AS 267
           + +T +A G  H+L L+    V  WG    GQLG G+    ++P   ++P    A   A+
Sbjct: 245 LTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQLGDGTTTGSLLPVTVVLPVGAEATAIAA 304

Query: 268 GKDRPL-LVRQGSV-----NSSGKAGRSYVKE---------------IACGGR---HSAV 303
           G+   L L   G+      N  G+ G     +               I+   R   H+  
Sbjct: 305 GRLHSLALTSDGTALAWGGNHWGQLGNGSTSDSSEPVAVSLPGGTRLISIASRDSDHNVA 364

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           +T  GA L +G    G  G G+T D   P   S      +  IA G  H++ +  +
Sbjct: 365 ITTEGAALAWGLNSQGHLGDGTTTDSATPVAVSLPAGAALTSIAVGDDHSLALPAQ 420


>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
          Length = 527

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 57  GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 111

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 151

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNG 211

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQ+ +WG N YGQLG G+
Sbjct: 212 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 269

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 270 KSNQSYPTPVVV 281



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 175 TGCLQNKV------------------------VMNIACGQMCSMAVVDTGEVYVWGYNGN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG++Y +G N +GQLGTG  
Sbjct: 211 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 270

Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP++  K    ++ +C + H SA  T+ G V  WG
Sbjct: 271 SNQSYP----TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 3/172 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++A G +H++ +
Sbjct: 84  GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 143

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   S  + + G+V
Sbjct: 144 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVMNIACGQMCSMAVVDTGEV 202

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  QI
Sbjct: 203 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQI 254



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G++Y WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 258


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC               Q S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G G T +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G     N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--SGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVVV 305



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 111/225 (49%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G G      P P  +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVNIACGQMCSMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS  +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP++  K    ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P   +++L + QV ++
Sbjct: 98  KKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRV-TGCLQNKVVVNIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
           S  + + G+V  WG+N  GQLGLG   ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 102/242 (42%), Gaps = 50/242 (20%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCQ 144

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 183

Query: 157 QSALPTEQAPPSDKRAG---EEVVKR----RKTSSAREESENP----ASGDEFFTL---- 201
             + PT   P   +  G    +VV      +  S A  ++        +G+    L    
Sbjct: 184 VGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGG 243

Query: 202 ---SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPH 257
              +PC V    G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++     PTP 
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV 303

Query: 258 LI 259
           ++
Sbjct: 304 VV 305



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 4/111 (3%)

Query: 22  VYMWGYLPGTSPEKSPILS-PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY         P  + PIP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWG-Y 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           +  GQ  L SG +  TP          V + A G+AH + +T+ G+VY WG
Sbjct: 232 NGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Callithrix jacchus]
          Length = 577

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 107 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 161

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 162 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 201

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 202 WGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNG 261

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 262 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 319

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 320 KSNQSYPTPVTV 331



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   PTP  +
Sbjct: 166 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PTPRRV 224

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D+G +  +G+   
Sbjct: 225 TGCLQNKV------------------------VVTIACGQMCCMAVVDSGEVYVWGYNGN 260

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 261 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 320

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 321 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 361



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 124 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 183

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    +  P+ + T  L++K    ++CG   
Sbjct: 184 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRV-TGCLQNKVVVTIACGQMC 242

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 243 CMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 302

Query: 466 QI 467
           Q+
Sbjct: 303 QV 304



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  P P R+ G    K V    CG    +A  +SG++  WG  
Sbjct: 199 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 257

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 258 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 308


>gi|91202109|emb|CAJ75169.1| hypothetical protein kuste4407 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1590

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 119/259 (45%), Gaps = 43/259 (16%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           L+T+ P     K+AAG RH+L L   G VW WG  G+GQLG                   
Sbjct: 560 LITVTP-----KIAAGARHSLALKSNGTVWAWGNNGDGQLG------------------- 595

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
             + K+R +  +  +VN+        +  I  G  HS  +   G +  +G    GQ G G
Sbjct: 596 DETTKNRTIPAQVSNVNA--------ITTIDGGASHSLALKSDGTVWVWGANWDGQLGDG 647

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
           +   +  P   S L DI    IA G++H++ +  +G V+ FG N +GQLG G +   N  
Sbjct: 648 TNTRKTTPVQISGLSDII--SIACGMYHSIALKSDGTVWAFGRNDYGQLGDGTNVYRN-- 703

Query: 385 KLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
                P+  S  + V++   G  H   L  DG V +WG N+ GQLG G + +RN P  V 
Sbjct: 704 ----KPVQVSGLSDVIAIAGGDYHCLALKSDGIVWAWGNNESGQLGDGTTTNRNTPVQVS 759

Query: 443 IHGFLPRNIACGWWHTLLL 461
               +   IA GW H+L L
Sbjct: 760 SISNVAA-IARGWVHSLAL 777



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 98/416 (23%), Positives = 153/416 (36%), Gaps = 107/416 (25%)

Query: 42  IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
           IPA++   ++   +  GG   +LA    G +  WG A+ +GQ  L  G +     P  + 
Sbjct: 604 IPAQVSNVNAITTI-DGGASHSLALKSDGTVWVWG-ANWDGQ--LGDGTNTRKTTPVQIS 659

Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
             + ++  A G  H +++   G V+ +G            D+G  G    D T      P
Sbjct: 660 GLSDIISIACGMYHSIALKSDGTVWAFG----------RNDYGQLG----DGTNVYRNKP 705

Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
            + +  SD                                            +  +A G 
Sbjct: 706 VQVSGLSD--------------------------------------------VIAIAGGD 721

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
            H L L   G VW WG    GQLG G+                  + ++ P+ V      
Sbjct: 722 YHCLALKSDGIVWAWGNNESGQLGDGT-----------------TTNRNTPVQV------ 758

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
               +  S V  IA G  HS  +     +  +G    GQ G G+T ++  P   +     
Sbjct: 759 ----SSISNVAAIARGWVHSLALKSDETVWAWGSNGSGQLGDGTTTNRTTP--VNITNIN 812

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------PKLLETPILESK 395
            +  IA G  +T+ +  +G  +  G  ++G      D +EN            TP   + 
Sbjct: 813 NIIAIAGGGGYTIALKSDGTGWTCG--EYGW-----DYSENNGSSYWGYSYRTTPDQVAG 865

Query: 396 RAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLP 448
              VV+   G +H  VL +DG V +WG N YGQLG G + DR+ P  V I+ G +P
Sbjct: 866 INDVVAVAGGWQHIVVLKQDGTVWTWGVNWYGQLGDGTTTDRDTPVQVDINLGEMP 921


>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Callithrix jacchus]
          Length = 556

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 86  GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 181 WGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNG 240

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 241 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 299 KSNQSYPTPVTV 310



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   PTP  +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PTPRRV 203

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D+G +  +G+   
Sbjct: 204 TGCLQNKV------------------------VVTIACGQMCCMAVVDSGEVYVWGYNGN 239

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 240 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 299

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 300 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 103 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 162

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    +  P+ + T  L++K    ++CG   
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRV-TGCLQNKVVVTIACGQMC 221

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 222 CMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 281

Query: 466 QI 467
           Q+
Sbjct: 282 QV 283



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  P P R+ G    K V    CG    +A  +SG++  WG  
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 236

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287


>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
          Length = 393

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 161/418 (38%), Gaps = 97/418 (23%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  + G L TWG        +    K    P          +V+AA G  HC++V + 
Sbjct: 50  SLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQ 109

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G  Y WG  E          +G                          + GEE       
Sbjct: 110 GRAYAWGGNE----------YG--------------------------QCGEE------- 126

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
              ++E E P   D       C     P + + +VAAGG H+++L+  G VW W     G
Sbjct: 127 -PGKDEMERPLRRD-IVIPKRCA----PKLVVRQVAAGGTHSVVLTREGHVWSW-----G 175

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           Q      IK +  P  +  LE+                          V+ IA G  H+ 
Sbjct: 176 QPWPPGDIKQISIPVRVQGLEN--------------------------VRLIAVGAFHNL 209

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            + + G L  +G   YGQ G G T  + +P     L  + +  IAAG WH+  ++ +G V
Sbjct: 210 ALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEV 269

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           Y +G  + G+LG G +   +     +  +L  +    VSCG  HS  LT DG++ S+G  
Sbjct: 270 YGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRG 329

Query: 423 KYGQLGLGDSIDRNIPSLVPIH-----------------GFLPRNIACGWWHTLLLAE 463
            +G+LG G  +    P  VP+                   ++ + +ACG  HTL + E
Sbjct: 330 DHGRLGCGRKVTTGQPLDVPVKIPPPEGQFNDAAEDDDGKWVAKVVACGGRHTLAIVE 387



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 44/274 (16%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           C+V       +  V +G R++L + D G ++ WG+   G LG     K    P  +  L 
Sbjct: 30  CVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALA 89

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
           +                          + + A GG H   V D G    +G   YGQCG 
Sbjct: 90  NVK------------------------IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 324 GSTNDQL-RPSYASSLM------DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
               D++ RP     ++       + V Q+AAG  H+V ++ EG V+ +G         G
Sbjct: 126 EPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGHVWSWG----QPWPPG 181

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
             +  ++P  ++   LE+ R  +++ GA H+  L E+G + +WG N+YGQLG GD+  R+
Sbjct: 182 DIKQISIPVRVQG--LENVR--LIAVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRS 237

Query: 437 IPSLVPIHGFLPR---NIACGWWHTLLLAETTQI 467
            P  +P+ G       +IA G WH+  L +  ++
Sbjct: 238 QP--IPVQGLDSLTLVDIAAGGWHSTALTDKGEV 269



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 113/300 (37%), Gaps = 90/300 (30%)

Query: 18  KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
           +E  V+ WG  + PG   + S     IP R+ G ++ + +  G     LA  E+G L  W
Sbjct: 167 REGHVWSWGQPWPPGDIKQIS-----IPVRVQGLENVRLIAVGAF-HNLALEENGTLWAW 220

Query: 76  GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           G+       Y   G     P   P+P +     ++V  AAG  H  ++T+ GEVY WG  
Sbjct: 221 GN-----NEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRG 275

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
           E           G  G    D + K                                   
Sbjct: 276 E----------HGRLGFGDNDKSSK----------------------------------- 290

Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI- 250
                    + P  V L  G  I +V+ GG H++ L+  G+++ +G G  G+LG G ++ 
Sbjct: 291 ---------MLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGCGRKVT 341

Query: 251 --KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK--AGRSYVKEIACGGRHSAVVTD 306
             + +  P  IP  E              G  N + +   G+   K +ACGGRH+  + +
Sbjct: 342 TGQPLDVPVKIPPPE--------------GQFNDAAEDDDGKWVAKVVACGGRHTLAIVE 387


>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
          Length = 527

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 57  GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VTEVACGSYHSLVLTSDGEVFA 151

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE-QIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  +  +V   IA G   ++ +   G VYV+G N  G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNG 211

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 212 QLGLG--SSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 269

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 270 KSNQSYPAPVIV 281



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K A  ++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVAVNIACGQMC 192

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  +   G+V  WG+N  GQLGLG S ++  P  +  + G   + +ACG+ HTL+L +  
Sbjct: 193 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 252

Query: 466 QI 467
           Q+
Sbjct: 253 QV 254



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 116/224 (51%), Gaps = 32/224 (14%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K +T+VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 116 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++  +            VN            IACG   S  V + G +  +G+   
Sbjct: 175 TGCLQNKVA------------VN------------IACGQMCSMAVVNTGEVYVWGYNGN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 211 GQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 379 QAENVPKLLETPILESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P  +   I+E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 271 SNQSYPAPV---IVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 96/238 (40%), Gaps = 42/238 (17%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 65  PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 120

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V + A G  H + +T  GEV+ WG+              ++G     ST  
Sbjct: 121 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 167

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
           Q  +P         +    +   +  S A   +                 +SG++    +
Sbjct: 168 Q-PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ---PT 223

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           PC +    G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++     P P ++
Sbjct: 224 PCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIV 281



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K      CG   ++A   +G++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G++ Q +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIECQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 111/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   +   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 125/301 (41%), Gaps = 48/301 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLT-SGKHGETPEPFP 99
           P ++   D+ +++    CG A  LA ++ G++  WG  D +GQ  L  S +    P    
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 132

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK 156
             ++  +V+ A G+ H +++++A EV+ WG  +          +G  G     QK ++ +
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIECQKQTSPQ 182

Query: 157 QSA----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
                  +P  Q       +    +        R +       DE     P L+      
Sbjct: 183 LIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           KI  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R 
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRK 287

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           +    GS+          V +IACG +H SA V  +G + +FG G  GQ G GST+++  
Sbjct: 288 VFELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 332 P 332
           P
Sbjct: 338 P 338


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G++ Q +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIECQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 111/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   +   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 48/301 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFP 99
           P ++   D+ +++    CG A  LA ++ G++  WG  D +GQ  L   +     P    
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 132

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK 156
             ++  +V+ A G+ H +++++A EV+ WG  +          +G  G     QK ++ +
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIECQKQTSPQ 182

Query: 157 QSA----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
                  +P  Q       +    +        R +       DE     P L+      
Sbjct: 183 LIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           KI  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R 
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRK 287

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           +    GS+          V +IACG +H SA V  +G + +FG G  GQ G GST+++  
Sbjct: 288 VFELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 332 P 332
           P
Sbjct: 338 P 338


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 100/182 (54%), Gaps = 4/182 (2%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
           A R  V+ I+CGGRH+A+VT  G + ++G    G+ GHG   D  +P    SL  + +E 
Sbjct: 308 AVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIEL 367

Query: 346 IAAGLWHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           +A G +HT  +++ G +Y +G    +FG LG G D +  VPK ++ P LE      +SCG
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGP-LEGIHVSSISCG 426

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
             H+A++T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + 
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVV 486

Query: 463 ET 464
           E 
Sbjct: 487 EV 488



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 49/272 (18%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  ++ GGRH  +++  G+++ WG    G+LG G     V  P LI  L H       
Sbjct: 311 LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD-VAQPKLIDSLAHMN----- 364

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                              ++ +ACG  H+  VT +G L T+G G   +G  GHG+    
Sbjct: 365 -------------------IELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSH 405

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P      ++ I V  I+ G WHT  ++  G+++ FG   FG LG G   + +VP+ +E
Sbjct: 406 WVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE 465

Query: 389 TPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLGDSIDRN 436
           +  L+  R    +CG  H+A + E             G++ +WG    G+LG GD   R 
Sbjct: 466 S--LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRF 523

Query: 437 IPSLVPIHGFLPRN---IACGWWHTLLLAETT 465
           +P+ V     +  N   +ACG  H L +A TT
Sbjct: 524 VPTCVA--ALVEPNFCQVACG--HCLTVALTT 551



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R  +   P  +  L+       
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASL-SVPREVESLK------- 468

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G + T+G G  
Sbjct: 469 ----------------GLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG  + +  P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 512 GRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN--P 569

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           QA+ +  +     L     + +SCGA H AVLT   +V +WG    G+LG G + D+N P
Sbjct: 570 QADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTP 629

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     R++ CG
Sbjct: 630 TLVEALKDKQVRSVVCG 646



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 121/281 (43%), Gaps = 43/281 (15%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG--GEGQLGLGSRIKMVPTPHLIP 260
           P L+     + I  VA G  HT  ++  G ++ WG G    G LG G+ +      H +P
Sbjct: 354 PKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVS-----HWVP 408

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                    D PL   +G           +V  I+CG  H+A+VT AG L TFG G +G 
Sbjct: 409 ------KRVDGPL---EG----------IHVSSISCGPWHTALVTSAGQLFTFGDGSFGV 449

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI------------SVEGRVYVFGGN 368
            GHG       P    SL  ++  + A G+WHT  +               G+++ +G  
Sbjct: 450 LGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             G+LG G   +  VP  +   ++E    + V+CG   +  LT  G V + G   YGQLG
Sbjct: 510 DKGRLGHGDKDSRFVPTCV-AALVEPNFCQ-VACGHCLTVALTTSGHVYTMGSAVYGQLG 567

Query: 429 LGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
                D  +P  V   +H      I+CG +H  +L   T++
Sbjct: 568 -NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEV 607



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P      + + V+ I+ G  H   ++ +G +Y +G    G+LG GVD     PKL+
Sbjct: 298 DYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLI 357

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV--PI 443
           ++  L     ++V+CG  H+  +T  G + +WG    K+G LG G+ +   +P  V  P+
Sbjct: 358 DS--LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G    +I+CG WHT L+    Q+
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQL 439



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 29/191 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+     P  V         +VA G   T+ L+  G V+  G    GQLG      ++P
Sbjct: 517 GDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLP 576

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                    V   GK  +++V+EI+CG  H AV+T    + T+G
Sbjct: 577 -------------------------VRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWG 611

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G  G+ GHG T+D+  P+   +L D QV  +  G+  T  I +    +V G +Q   + 
Sbjct: 612 KGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHK--WVSGSDQ--SMC 667

Query: 375 TGVDQAENVPK 385
           +G  Q  N+ +
Sbjct: 668 SGCRQPFNLRR 678



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 41/213 (19%)

Query: 211 GVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPH 257
           G++  + A G  HT  + ++            G+++ WG G +G+LG G +  + VPT  
Sbjct: 469 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPT-- 526

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
              C+           LV                 ++ACG   +  +T +G + T G  +
Sbjct: 527 ---CVA---------ALVEPNFC------------QVACGHCLTVALTTSGHVYTMGSAV 562

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           YGQ G+   +  L       L    VE+I+ G +H   ++    VY +G    G+LG G 
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +N P L+E   L+ K+ + V CG   +A +
Sbjct: 623 TDDKNTPTLVEA--LKDKQVRSVVCGINFTAAI 653


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 113/252 (44%), Gaps = 25/252 (9%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  V+ G  H++ + D G ++ WG G EGQLG G       TP  I              
Sbjct: 86  IVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRI-------------- 131

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRP 332
                    +G   R  + +I+CG  HS  + + G + ++G    GQ G GS   +Q  P
Sbjct: 132 ---------TGLLNRKII-QISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+ AG   T  +S+ G V+ +G N  GQLG   D  +   K      L
Sbjct: 182 QLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSL 241

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA 452
                  +SCG  H+AVL +DG V ++G + YGQLG       ++P  +  +      +A
Sbjct: 242 RDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQVSQVA 301

Query: 453 CGWWHTLLLAET 464
           CG +HTLL   T
Sbjct: 302 CGRYHTLLYVFT 313



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 81/152 (53%), Gaps = 4/152 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++++ G +HS  +   G LL+ G   YGQ G    N   R    SSL    +  ++ G 
Sbjct: 36  VQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNS--RIEQISSLEAQTIVDVSCGT 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            H+V +  EG +Y +G    GQLGTG   ++N      T +L  K  + +SCG  HS  L
Sbjct: 94  NHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQ-ISCGNFHSVAL 152

Query: 411 TEDGQVLSWGWNKYGQLGLGDS-IDRNIPSLV 441
            EDG+V SWG NK GQLGLG   I++  P LV
Sbjct: 153 AEDGRVFSWGQNKCGQLGLGSQIINQATPQLV 184



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 88/194 (45%), Gaps = 38/194 (19%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
           KI +++ G  H++ L++ G+V+ WG    GQLGLGS+I    TP L      IP ++  A
Sbjct: 138 KIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTA 197

Query: 267 SGKDRPLLVRQGSV-----NSSGKAG----------RSY---------VKEIACGGRHSA 302
            G     L   G+V     N++G+ G          + Y         V  I+CG  H+A
Sbjct: 198 GGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTA 257

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           V+   G + TFG   YGQ G  S N    P         QV Q+A G +HT+       +
Sbjct: 258 VLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEE-YSRQVSQVACGRYHTL-------L 309

Query: 363 YVFGGNQFGQLGTG 376
           YVF  N+    G G
Sbjct: 310 YVFTCNRIVSFGKG 323



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 8/124 (6%)

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
           V++++ G  H++ +  +G +   G N +GQLG    +  N  ++ +   LE++    VSC
Sbjct: 36  VQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLG----RKGNNSRIEQISSLEAQTIVDVSC 91

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTL 459
           G  HS  + ++G + SWG    GQLG G    +N      I G L R    I+CG +H++
Sbjct: 92  GTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTP-KRITGLLNRKIIQISCGNFHSV 150

Query: 460 LLAE 463
            LAE
Sbjct: 151 ALAE 154


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 92/268 (34%), Positives = 130/268 (48%), Gaps = 31/268 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 57  GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 112 -TNHGLMPC---------------HISTNLSNKQ----VTEVACGSYHSLVLTSDGEVFA 151

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNG 211

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 212 QLGLG--SSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 269

Query: 432 SIDRNIPSLVPIHGFLPRNI-ACGWWHT 458
             +++ P+ V +       I AC   HT
Sbjct: 270 KSNQSYPAPVVVEKDRIIEIAACHLAHT 297



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 113/224 (50%), Gaps = 32/224 (14%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K +T+VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 116 LMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V + G +  +G+   
Sbjct: 175 TGCLQNKV------------------------VVNIACGQMCSMAVVNTGEVYVWGYNGN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   S+L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 211 GQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 379 QAENVPKLLETPILESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P  +   ++E  R  ++ +C   H SA  T+ G V  WG
Sbjct: 271 SNQSYPAPV---VVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 311



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEV 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVVNIACGQMC 192

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
           S  +   G+V  WG+N  GQLGLG S ++  P  +  + G   + +ACG+ HTL+L +  
Sbjct: 193 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEG 252

Query: 466 QI 467
           Q+
Sbjct: 253 QV 254



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 41/227 (18%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 65  PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLMPCH 120

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V + A G  H + +T  GEV+ WG             + ++G     ST  
Sbjct: 121 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 167

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
           Q  +P         +    +   +  S A   +                 +SG++    +
Sbjct: 168 Q-PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ---PT 223

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
           PC ++   G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++
Sbjct: 224 PCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A   +G++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 40/260 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  + L   +KI  V  G  H LILS  G+ + +       L   S ++          
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQ---------- 136

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                                        + +I CG  HS  ++  G L  +G  L+GQ 
Sbjct: 137 --------------------------EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQL 170

Query: 322 GHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
           G G        P     L  + + QI+AG  H++ +S+ G +Y +G N+FGQLG G  ++
Sbjct: 171 GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTES 230

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           ++ P L+E   L+++  + ++CG  HSA+LT+DG + ++G  K+GQLG   + +   P L
Sbjct: 231 KDYPSLIEA--LDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCL 288

Query: 441 VP-IHGFLPRNIACGWWHTL 459
           V  + G     IACG WHTL
Sbjct: 289 VAELVGNRVTQIACGRWHTL 308



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 120/244 (49%), Gaps = 34/244 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G ++ WG    GQLGLG            
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 226

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               H  S KD P L+               V+ +ACGG HSA++T  G L TFG G +G
Sbjct: 227 ----HTES-KDYPSLIE--------ALDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHG 273

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L+  +V QIA G WHT+  +S  G+V+ FG  + GQLG G  
Sbjct: 274 QLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRN 436
           + + +P  L   +  S+  K+ +  +    ++   G   +L W   +   + L     R 
Sbjct: 334 RDQLIP--LPVKVSSSEELKLETHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRT 387

Query: 437 IPSL 440
           IP+L
Sbjct: 388 IPTL 391



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 12/136 (8%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE---- 388
           + S L + ++ QI  G +H++ +S  G ++ +G N  GQLG G    +   P+++E    
Sbjct: 131 FESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAG 190

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
            P+ +      +S G  HS  L+  G + SWG N++GQLGLG +  ++ PSL+  +    
Sbjct: 191 VPLAQ------ISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQE 244

Query: 448 PRNIACGWWHTLLLAE 463
              +ACG  H+ LL +
Sbjct: 245 VEFLACGGSHSALLTQ 260


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 100/182 (54%), Gaps = 4/182 (2%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
           A R  V+ I+CGGRH+A+VT  G + ++G    G+ GHG   D  +P    SL  + +E 
Sbjct: 308 AVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIEL 367

Query: 346 IAAGLWHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           +A G +HT  +++ G +Y +G    +FG LG G D +  VPK ++ P LE      +SCG
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGP-LEGIHVSSISCG 426

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
             H+A++T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + 
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVV 486

Query: 463 ET 464
           E 
Sbjct: 487 EV 488



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 49/272 (18%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  ++ GGRH  +++  G+++ WG    G+LG G     V  P LI  L H       
Sbjct: 311 LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD-VAQPKLIDSLAHMN----- 364

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                              ++ +ACG  H+  VT +G L T+G G   +G  GHG+    
Sbjct: 365 -------------------IELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSH 405

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P      ++ I V  I+ G WHT  ++  G+++ FG   FG LG G   + +VP+ +E
Sbjct: 406 WVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE 465

Query: 389 TPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLGDSIDRN 436
           +  L+  R    +CG  H+A + E             G++ +WG    G+LG GD   R 
Sbjct: 466 S--LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRF 523

Query: 437 IPSLVPIHGFLPRN---IACGWWHTLLLAETT 465
           +P+ V     +  N   +ACG  H L +A TT
Sbjct: 524 VPTCVA--ALVEPNFCQVACG--HCLTVALTT 551



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R  +   P  +  L+       
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASL-SVPREVESLK------- 468

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G + T+G G  
Sbjct: 469 ----------------GLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG  + +  P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 512 GRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN--P 569

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           QA+ +  +     L     + +SCGA H AVLT   +V +WG    G+LG G + D+N P
Sbjct: 570 QADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTP 629

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     R++ CG
Sbjct: 630 TLVEALKDKQVRSVVCG 646



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 121/281 (43%), Gaps = 43/281 (15%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG--GEGQLGLGSRIKMVPTPHLIP 260
           P L+     + I  VA G  HT  ++  G ++ WG G    G LG G+ +      H +P
Sbjct: 354 PKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVS-----HWVP 408

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                    D PL   +G           +V  I+CG  H+A+VT AG L TFG G +G 
Sbjct: 409 ------KRVDGPL---EG----------IHVSSISCGPWHTALVTSAGQLFTFGDGSFGV 449

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI------------SVEGRVYVFGGN 368
            GHG       P    SL  ++  + A G+WHT  +               G+++ +G  
Sbjct: 450 LGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             G+LG G   +  VP  +   ++E    + V+CG   +  LT  G V + G   YGQLG
Sbjct: 510 DKGRLGHGDKDSRFVPTCV-AALVEPNFCQ-VACGHCLTVALTTSGHVYTMGSAVYGQLG 567

Query: 429 LGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
                D  +P  V   +H      I+CG +H  +L   T++
Sbjct: 568 -NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEV 607



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P      + + V+ I+ G  H   ++ +G +Y +G    G+LG GVD     PKL+
Sbjct: 298 DYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLI 357

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV--PI 443
           ++  L     ++V+CG  H+  +T  G + +WG    K+G LG G+ +   +P  V  P+
Sbjct: 358 DS--LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G    +I+CG WHT L+    Q+
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQL 439



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 29/191 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+     P  V         +VA G   T+ L+  G V+  G    GQLG      ++P
Sbjct: 517 GDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLP 576

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                    V   GK  +++V+EI+CG  H AV+T    + T+G
Sbjct: 577 -------------------------VRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWG 611

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G  G+ GHG T+D+  P+   +L D QV  +  G+  T  I +    +V G +Q   + 
Sbjct: 612 KGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHK--WVSGSDQ--SMC 667

Query: 375 TGVDQAENVPK 385
           +G  Q  N+ +
Sbjct: 668 SGCRQPFNLRR 678



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 41/213 (19%)

Query: 211 GVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPH 257
           G++  + A G  HT  + ++            G+++ WG G +G+LG G +  + VPT  
Sbjct: 469 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPT-- 526

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
              C+           LV                 ++ACG   +  +T +G + T G  +
Sbjct: 527 ---CVA---------ALVEPNFC------------QVACGHCLTVALTTSGHVYTMGSAV 562

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           YGQ G+   +  L       L    VE+I+ G +H   ++    VY +G    G+LG G 
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +N P L+E   L+ K+ + V CG   +A +
Sbjct: 623 TDDKNTPTLVEA--LKDKQVRSVVCGINFTAAI 653


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 100/182 (54%), Gaps = 4/182 (2%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
           A R  V+ I+CGGRH+A+VT  G + ++G    G+ GHG   D  +P    SL  + +E 
Sbjct: 308 AVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIEL 367

Query: 346 IAAGLWHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           +A G +HT  +++ G +Y +G    +FG LG G D +  VPK ++ P LE      +SCG
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGP-LEGIHVSSISCG 426

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
             H+A++T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + 
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVV 486

Query: 463 ET 464
           E 
Sbjct: 487 EV 488



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 49/272 (18%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  ++ GGRH  +++  G+++ WG    G+LG G     V  P LI  L H       
Sbjct: 311 LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD-VAQPKLIDSLAHMN----- 364

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                              ++ +ACG  H+  VT +G L T+G G   +G  GHG+    
Sbjct: 365 -------------------IELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSH 405

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P      ++ I V  I+ G WHT  ++  G+++ FG   FG LG G   + +VP+ +E
Sbjct: 406 WVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE 465

Query: 389 TPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLGDSIDRN 436
           +  L+  R    +CG  H+A + E             G++ +WG    G+LG GD   R 
Sbjct: 466 S--LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRF 523

Query: 437 IPSLVPIHGFLPRN---IACGWWHTLLLAETT 465
           +P+ V     +  N   +ACG  H L +A TT
Sbjct: 524 VPTCVA--ALVEPNFCQVACG--HCLTVALTT 551



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R  +   P  +  L+       
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASL-SVPREVESLK------- 468

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G + T+G G  
Sbjct: 469 ----------------GLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG  + +  P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 512 GRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN--P 569

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           QA+ +  +     L     + +SCGA H AVLT   +V +WG    G+LG G + D+N P
Sbjct: 570 QADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTP 629

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     R++ CG
Sbjct: 630 TLVEALKDKQVRSVVCG 646



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 121/281 (43%), Gaps = 43/281 (15%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG--GEGQLGLGSRIKMVPTPHLIP 260
           P L+     + I  VA G  HT  ++  G ++ WG G    G LG G+ +      H +P
Sbjct: 354 PKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVS-----HWVP 408

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                    D PL   +G           +V  I+CG  H+A+VT AG L TFG G +G 
Sbjct: 409 ------KRVDGPL---EG----------IHVSSISCGPWHTALVTSAGQLFTFGDGSFGV 449

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI------------SVEGRVYVFGGN 368
            GHG       P    SL  ++  + A G+WHT  +               G+++ +G  
Sbjct: 450 LGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             G+LG G   +  VP  +   ++E    + V+CG   +  LT  G V + G   YGQLG
Sbjct: 510 DKGRLGHGDKDSRFVPTCVAA-LVEPNFCQ-VACGHCLTVALTTSGHVYTMGSAVYGQLG 567

Query: 429 LGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
                D  +P  V   +H      I+CG +H  +L   T++
Sbjct: 568 -NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEV 607



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P      + + V+ I+ G  H   ++ +G +Y +G    G+LG GVD     PKL+
Sbjct: 298 DYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLI 357

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV--PI 443
           ++  L     ++V+CG  H+  +T  G + +WG    K+G LG G+ +   +P  V  P+
Sbjct: 358 DS--LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G    +I+CG WHT L+    Q+
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQL 439



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 29/191 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+     P  V         +VA G   T+ L+  G V+  G    GQLG      ++P
Sbjct: 517 GDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLP 576

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                    V   GK  +++V+EI+CG  H AV+T    + T+G
Sbjct: 577 -------------------------VRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWG 611

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G  G+ GHG T+D+  P+   +L D QV  +  G+  T  I +    +V G +Q   + 
Sbjct: 612 KGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHK--WVSGSDQ--SMC 667

Query: 375 TGVDQAENVPK 385
           +G  Q  N+ +
Sbjct: 668 SGCRQPFNLRR 678



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 41/213 (19%)

Query: 211 GVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPH 257
           G++  + A G  HT  + ++            G+++ WG G +G+LG G +  + VPT  
Sbjct: 469 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPT-- 526

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
              C+           LV                 ++ACG   +  +T +G + T G  +
Sbjct: 527 ---CVA---------ALVEPNFC------------QVACGHCLTVALTTSGHVYTMGSAV 562

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           YGQ G+   +  L       L    VE+I+ G +H   ++    VY +G    G+LG G 
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +N P L+E   L+ K+ + V CG   +A +
Sbjct: 623 TDDKNTPTLVEA--LKDKQVRSVVCGINFTAAI 653


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 100/182 (54%), Gaps = 4/182 (2%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
           A R  V+ I+CGGRH+A+VT  G + ++G    G+ GHG   D  +P    SL  + +E 
Sbjct: 308 AVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIEL 367

Query: 346 IAAGLWHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           +A G +HT  +++ G +Y +G    +FG LG G D +  VPK ++ P LE      +SCG
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGP-LEGIHVSSISCG 426

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
             H+A++T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + 
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVV 486

Query: 463 ET 464
           E 
Sbjct: 487 EV 488



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 49/272 (18%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  ++ GGRH  +++  G+++ WG    G+LG G     V  P LI  L H       
Sbjct: 311 LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD-VAQPKLIDSLAHMN----- 364

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                              ++ +ACG  H+  VT +G L T+G G   +G  GHG+    
Sbjct: 365 -------------------IELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSH 405

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P      ++ I V  I+ G WHT  ++  G+++ FG   FG LG G   + +VP+ +E
Sbjct: 406 WVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE 465

Query: 389 TPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLGDSIDRN 436
           +  L+  R    +CG  H+A + E             G++ +WG    G+LG GD   R 
Sbjct: 466 S--LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRF 523

Query: 437 IPSLVPIHGFLPRN---IACGWWHTLLLAETT 465
           +P+ V     +  N   +ACG  H L +A TT
Sbjct: 524 VPTCVA--ALVEPNFCQVACG--HCLTVALTT 551



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R  +   P  +  L+       
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASL-SVPREVESLK------- 468

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G + T+G G  
Sbjct: 469 ----------------GLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG  + +  P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 512 GRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN--P 569

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           QA+ +  +     L     + +SCGA H AVLT   +V +WG    G+LG G + D+N P
Sbjct: 570 QADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTP 629

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     R++ CG
Sbjct: 630 TLVEALKDKQVRSVVCG 646



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 121/281 (43%), Gaps = 43/281 (15%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG--GEGQLGLGSRIKMVPTPHLIP 260
           P L+     + I  VA G  HT  ++  G ++ WG G    G LG G+ +      H +P
Sbjct: 354 PKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVS-----HWVP 408

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                    D PL   +G           +V  I+CG  H+A+VT AG L TFG G +G 
Sbjct: 409 ------KRVDGPL---EG----------IHVSSISCGPWHTALVTSAGQLFTFGDGSFGV 449

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI------------SVEGRVYVFGGN 368
            GHG       P    SL  ++  + A G+WHT  +               G+++ +G  
Sbjct: 450 LGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             G+LG G   +  VP  +   ++E    + V+CG   +  LT  G V + G   YGQLG
Sbjct: 510 DKGRLGHGDKDSRFVPTCV-AALVEPNFCQ-VACGHCLTVALTTSGHVYTMGSAVYGQLG 567

Query: 429 LGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
                D  +P  V   +H      I+CG +H  +L   T++
Sbjct: 568 -NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEV 607



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P      + + V+ I+ G  H   ++ +G +Y +G    G+LG GVD     PKL+
Sbjct: 298 DYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLI 357

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV--PI 443
           ++  L     ++V+CG  H+  +T  G + +WG    K+G LG G+ +   +P  V  P+
Sbjct: 358 DS--LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G    +I+CG WHT L+    Q+
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQL 439



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 29/191 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+     P  V         +VA G   T+ L+  G V+  G    GQLG      ++P
Sbjct: 517 GDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLP 576

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                    V   GK  +++V+EI+CG  H AV+T    + T+G
Sbjct: 577 -------------------------VRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWG 611

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G  G+ GHG T+D+  P+   +L D QV  +  G+  T  I +    +V G +Q   + 
Sbjct: 612 KGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHK--WVSGSDQ--SMC 667

Query: 375 TGVDQAENVPK 385
           +G  Q  N+ +
Sbjct: 668 SGCRQPFNLRR 678



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 41/213 (19%)

Query: 211 GVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPH 257
           G++  + A G  HT  + ++            G+++ WG G +G+LG G +  + VPT  
Sbjct: 469 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPT-- 526

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
              C+           LV                 ++ACG   +  +T +G + T G  +
Sbjct: 527 ---CVA---------ALVEPNFC------------QVACGHCLTVALTTSGHVYTMGSAV 562

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           YGQ G+   +  L       L    VE+I+ G +H   ++    VY +G    G+LG G 
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +N P L+E   L+ K+ + V CG   +A +
Sbjct: 623 TDDKNTPTLVEA--LKDKQVRSVVCGINFTAAI 653


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G++ Q +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIECQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 111/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   +   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 48/301 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFP 99
           P ++   D+ +++    CG A  LA ++ G++  WG  D +GQ  L   +     P    
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 132

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK 156
             ++  +V+ A G+ H +++++A EV+ WG  +          +G  G     QK ++ +
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIECQKQTSPQ 182

Query: 157 QSA----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
                  +P  Q       +    +        R +       DE     P L+      
Sbjct: 183 LIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           KI  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R 
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRK 287

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           +    GS+          V +IACG +H SA V  +G + +FG G  GQ G GST+++  
Sbjct: 288 VFELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 332 P 332
           P
Sbjct: 338 P 338


>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
            KIAA1239-like [Oreochromis niloticus]
          Length = 2697

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 132/285 (46%), Gaps = 28/285 (9%)

Query: 210  PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI--KMVPTPHLIPCLEHAAS 267
            PGV ITK+  G RHTL L+  G V   G+  +GQLG   +   K++     +  +   A 
Sbjct: 1710 PGV-ITKICCGDRHTLFLNADGNVLSCGHNSQGQLGRQKKKNGKIIAQVEALGSVVAMAC 1768

Query: 268  GKDRPLLVR-QGSVNS--SGKAGR---------------------SYVKEIACGGRHSAV 303
            G+D  L V   G V S  +G+ G+                       + ++ACG  HS  
Sbjct: 1769 GQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLA 1828

Query: 304  VTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +T  G + ++G   +GQ G G     Q  P    +L  + V QIAAG  H++ +++   V
Sbjct: 1829 LTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTLADLV 1888

Query: 363  YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
            Y  G N+ GQLG      +    +   P L       +SCG  HSAVLT+DG+V ++G  
Sbjct: 1889 YCCGANKCGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLTKDGKVYTFGDG 1948

Query: 423  KYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
              GQLG   S +   P LV         IACG  HTL+L  + Q+
Sbjct: 1949 SQGQLGHSTSANEVKPKLVAGLDGPASQIACGRHHTLVLGSSGQL 1993



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 127/316 (40%), Gaps = 86/316 (27%)

Query: 105  SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
            SVV  A G  HC++V+ +G V++WG  E                      G+   LPT  
Sbjct: 1762 SVVAMACGQDHCLAVSASGHVFSWGAGE---------------------DGQLGLLPT-- 1798

Query: 165  APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
             P S  R                               P  V +   + I +VA G  H+
Sbjct: 1799 -PSSSHR-------------------------------PSKVPIPLPIPIIQVACGNSHS 1826

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------EHAASGKDRPLLVRQG 278
            L L+  G V+ WG    GQLGLG  + +  TP +I  L      + AA G     L    
Sbjct: 1827 LALTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTLAD 1886

Query: 279  SV-----NSSGKAGRSYVKE-------------------IACGGRHSAVVTDAGALLTFG 314
             V     N  G+ G + V E                   I+CG  HSAV+T  G + TFG
Sbjct: 1887 LVYCCGANKCGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLTKDGKVYTFG 1946

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
             G  GQ GH ++ ++++P   + L D    QIA G  HT+ +   G+++ FG    GQ G
Sbjct: 1947 DGSQGQLGHSTSANEVKPKLVAGL-DGPASQIACGRHHTLVLGSSGQLWAFGSGAKGQTG 2005

Query: 375  TGVDQAENVPKLLETP 390
             G + +   P L++ P
Sbjct: 2006 NGHNDSCLTPTLVQFP 2021



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 77/205 (37%), Gaps = 54/205 (26%)

Query: 308  GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
            G +  F WG       G    Q  PS  S  +   + +I  G  HT+ ++ +G V   G 
Sbjct: 1681 GDMQLFCWG---DSSSGQFGPQAAPSPVSWTVPGVITKICCGDRHTLFLNADGNVLSCGH 1737

Query: 368  NQFGQLG-----------------------TGVDQAENVPK----------------LLE 388
            N  GQLG                        G D    V                  LL 
Sbjct: 1738 NSQGQLGRQKKKNGKIIAQVEALGSVVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLLP 1797

Query: 389  TPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID-RNI 437
            TP    + +KV          V+CG  HS  LT+ G V SWG N +GQLGLG  +  ++ 
Sbjct: 1798 TPSSSHRPSKVPIPLPIPIIQVACGNSHSLALTKGGDVFSWGLNSHGQLGLGKEVPVQHT 1857

Query: 438  PSLV-PIHGFLPRNIACGWWHTLLL 461
            P ++  + G     IA G  H+L L
Sbjct: 1858 PVIICALAGVAVTQIAAGGTHSLFL 1882


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 137/301 (45%), Gaps = 57/301 (18%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL--IPCLE------H 264
           +I ++ AG  HT++L+  G+V+  GY   GQ G G   ++    HL  IP ++      H
Sbjct: 596 EIIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTARV---SHLSEIPKMDSGSSQAH 652

Query: 265 AASGKDRPLLVR-QGSVNSSGKAGR----------------------SYVKEIACGGRHS 301
           A +G +  +LV   G V + G   R                        V+ ++C   H+
Sbjct: 653 AYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHT 712

Query: 302 AVVTDAGAL---LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            +  + G L    TFG   YGQ GH  + D+  P +  +L D Q+  +A G +HT+ ++ 
Sbjct: 713 VLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTA 772

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---LESKRAKVVSCGARHSAVLTEDGQ 415
            G+ + FG N +GQL  G+D  EN  +L    +   LE +    + CG  H+  L     
Sbjct: 773 SGKAFAFGKNDYGQL--GIDTMEN--QLAPVQVRGGLERQECLEIRCGYYHTIALCSGAH 828

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV-------------PIHGFLPRNIACGWWHTLLLA 462
           + ++G N YGQLGLG S   +  +L               + G     IACG +HT+ ++
Sbjct: 829 LFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVS 888

Query: 463 E 463
           +
Sbjct: 889 D 889



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 48/287 (16%)

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------AASGKDRPL 273
           G  HT+++S  G+V   GY   GQLG G+       P +I  LE+      + S     L
Sbjct: 656 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSE-SVPKIIRSLENKIVRLVSCSYYHTVL 714

Query: 274 LVRQGSVNSSGKAGRS-------------------------YVKEIACGGRHSAVVTDAG 308
               G++ +    GR+                          +  +ACG  H+ VVT +G
Sbjct: 715 ACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASG 774

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGG 367
               FG   YGQ G  +  +QL P      ++ Q   +I  G +HT+ +     ++ FG 
Sbjct: 775 KAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGR 834

Query: 368 NQFGQLGTGVDQAENVPKL-LETPI---------LESKRAKVVSCGARHSAVLTEDGQVL 417
           N +GQLG G   A +   L L+            LE K    ++CG  H+  ++++G + 
Sbjct: 835 NDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMY 894

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLL 461
            +G N +GQLG GD+ +R  P   PI  F+ +    +A G++HT++L
Sbjct: 895 VFGRNNHGQLGTGDTTERVYP--FPIDDFVGKRVALVAAGFYHTVVL 939



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 96/213 (45%), Gaps = 42/213 (19%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           +I  VA G  HT++++  G+ + +G    GQLG             I  +E+  +    P
Sbjct: 756 QIVSVACGQYHTMVVTASGKAFAFGKNDYGQLG-------------IDTMENQLA----P 798

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN----- 327
           + VR       G   R    EI CG  H+  +     L  FG   YGQ G G +N     
Sbjct: 799 VQVR-------GGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTS 851

Query: 328 ----DQLRPSYASSLMDIQ---VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
                Q R S A  + +++   + +IA G +HT+ +S  G +YVFG N  GQLGTG D  
Sbjct: 852 NLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTG-DTT 910

Query: 381 ENVPKLLETPI--LESKRAKVVSCGARHSAVLT 411
           E V      PI     KR  +V+ G  H+ VLT
Sbjct: 911 ERVYPF---PIDDFVGKRVALVAAGFYHTVVLT 940



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 4/152 (2%)

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G   YG+ GHG T  +       +L   ++ QI AG  HTV ++ +G+V+  G N  GQ 
Sbjct: 568 GQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQC 627

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSC-GARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           G G      V  L E P ++S  ++  +  G  H+ +++ DG+V + G+N  GQLG G++
Sbjct: 628 GQG--GTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNT 685

Query: 433 IDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
              ++P ++  +   + R ++C ++HT+L  E
Sbjct: 686 TSESVPKIIRSLENKIVRLVSCSYYHTVLACE 717


>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
 gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
          Length = 1160

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 164/411 (39%), Gaps = 63/411 (15%)

Query: 58   GGCGFALATSESGKLITWGSAD--DEGQSYLTS-GKHGETPEPFPLPTEASVVKAAAGWA 114
            G  GF LA    G    WG  +    G   LT   K     +P     + + V+ +AG  
Sbjct: 674  GDRGFTLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDE 733

Query: 115  HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
              ++V   G VY WG  E              G     S+G  S +P     P+D R+G 
Sbjct: 734  QSLAVGSDGYVYAWGNNES-------------GQLGNGSSGGYSTVPLRVIDPNDPRSGL 780

Query: 175  EVVKRRK---TSSAREESENP-----------ASGDEFFTLSPCLVTL--NPG-VKITKV 217
              V+       S A +   N             +G+   +  P L     + G V   +V
Sbjct: 781  TAVQVSAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQV 840

Query: 218  AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRPLLVR 276
            + G  HT  +   G  W WG+   GQLG G+ I   +P P   P                
Sbjct: 841  SGGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPR--------------- 885

Query: 277  QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP---- 332
                     AG     +++ G  HS ++   G    +GW   G+ G+GS++    P    
Sbjct: 886  --------DAGTVRAIQVSAGADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGM 937

Query: 333  -SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
              Y  +   +   Q++AG +H++ I   G  + +GGN  G+LG G      +P L++ P 
Sbjct: 938  VKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPK 997

Query: 392  LESKRAKV-VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
                   V VS G  HS  + ++G+  +WG+N++GQLG G   + +IP+ V
Sbjct: 998  NAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQFGQLGNGTISNSSIPTPV 1048



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 51/294 (17%)

Query: 191 NPASGDEFFTLSPCLVTLNPG--VKITKVAA----GGR-HTLILSDMGQVWGWGYGGEGQ 243
           NP  G +F   +   +T  PG  +K  +++     G R  TL +   G  + WG    GQ
Sbjct: 640 NPDKGSQFGNET-TTITPPPGQGIKFNQISGSRDFGDRGFTLAVGSDGNAYAWGRNNYGQ 698

Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
           LG G+  +                 +++P++V++    +   A  +YV +++ G   S  
Sbjct: 699 LGDGTLTQ-----------------RNKPVIVKK---PAGASADFTYV-QVSAGDEQSLA 737

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQ-------LRPSYASSLMDIQVEQIAAGLWHTVCI 356
           V   G +  +G    GQ G+GS+          + P+   S   +   Q++AG +H++ +
Sbjct: 738 VGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRS--GLTAVQVSAGYYHSLAL 795

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQ 415
              G ++ +G NQFG+LG G +    +P L + P        + VS G  H+A +   G 
Sbjct: 796 DARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGN 855

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN--------IACGWWHTLLL 461
             SWGWN +GQLG G++ID  IP  VP+    PR+        ++ G  H+L++
Sbjct: 856 TWSWGWNWFGQLGNGNNIDSAIP--VPVQ--YPRDAGTVRAIQVSAGADHSLII 905



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 120/260 (46%), Gaps = 38/260 (14%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           +V+AG   +L +   G V+ WG    GQLG GS                  SG    + +
Sbjct: 727 QVSAGDEQSLAVGSDGYVYAWGNNESGQLGNGS------------------SGGYSTVPL 768

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
           R    N   ++G + V +++ G  HS  +   G +  +G+  +G+ G+G+  +   P+ A
Sbjct: 769 RVIDPNDP-RSGLTAV-QVSAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIPTLA 826

Query: 336 SSLMD---IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP-I 391
               D   +   Q++ G  HT  I  +G  + +G N FGQLG G +    +P  ++ P  
Sbjct: 827 QYPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRD 886

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRN-IPSLVPIHGFLPR 449
             + RA  VS GA HS ++   G   +WGWN+ G+LG G  S D N +P +V      P 
Sbjct: 887 AGTVRAIQVSAGADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVK----YPE 942

Query: 450 N--------IACGWWHTLLL 461
           N        ++ G +H+L +
Sbjct: 943 NAGTVTAIQVSAGGYHSLAI 962


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 32/291 (10%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL---GSRIKMVPTPH 257
           L P  +      +I ++A G  +T++++ +G+++  G    GQLG      R++++P   
Sbjct: 50  LIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLD 109

Query: 258 LIPCLEHAASGKDRPLLVR--------------QGSVNSSG----------KAGRSYVKE 293
                + AA G    L +               Q  +NS              G S V +
Sbjct: 110 AF-VFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQ 168

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWH 352
           IACG +H+  +T+ G L ++G    GQ G G+    +++P + S+ + I +  IA G +H
Sbjct: 169 IACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYH 228

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           ++ IS  G V+ +G N FGQLG    Q  N+P  L+T  L++ +    +CG   S  LT 
Sbjct: 229 SIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQT--LQNAKICYAACGEEFSVFLTV 286

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLA 462
           DG V + G   YGQLG G + +  +P  ++ + G     I+CG  HTL L 
Sbjct: 287 DGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALV 337



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 154/366 (42%), Gaps = 62/366 (16%)

Query: 95  PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
           P        A + + A G  + V +T+ GE+Y+ G            D+G  G   +   
Sbjct: 52  PRELDFKKAAEIQQIACGENYTVVITQIGEIYSCG----------NNDYGQLG--HEKGR 99

Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE-----------ESENPASGDEFFTLSP 203
            +   +P   A    K A         T +  E           E +   +   F   SP
Sbjct: 100 KRLQLIPGLDAFVFKKAA----CGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSP 155

Query: 204 CLV-TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            +V TL   V + ++A G +H   L++ G+++ WG   EGQLGLG+ IK    P  I   
Sbjct: 156 RMVKTLGTSV-VVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFI--- 211

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQ 320
                               S   G   +  IACGG HS  ++ +GA+  FGWG   +GQ
Sbjct: 212 --------------------SAFIGIP-IAFIACGGYHSIAISKSGAV--FGWGKNTFGQ 248

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            G   T D+  P    +L + ++   A G   +V ++V+G V+  G   +GQLG G +  
Sbjct: 249 LGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSN 308

Query: 381 ENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           E +P+  +   L       +SCG RH+ A++   G+V +WG    GQLG   +     P 
Sbjct: 309 EILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQ 366

Query: 440 LVPIHG 445
           +V  HG
Sbjct: 367 VV--HG 370



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 99/179 (55%), Gaps = 11/179 (6%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTNDQLRPSYASSLMDIQVEQIAA 348
           +++IACG  ++ V+T  G + + G   YGQ GH  G    QL P   + +     ++ A 
Sbjct: 63  IQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVF----KKAAC 118

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHS 407
           G +HT+ I+  G+++ +G N  GQLG       E+ P++++T  L +     ++CG +H+
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKT--LGTSVVVQIACGMKHA 176

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVPIHGFLP-RNIACGWWHTLLLAET 464
             LT +G++ SWG N  GQLGLG  I   I P  +     +P   IACG +H++ ++++
Sbjct: 177 FALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKS 235



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 10/161 (6%)

Query: 313 FGWG--LYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           F WG  ++G+ G G   D+  L P         +++QIA G  +TV I+  G +Y  G N
Sbjct: 29  FCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNN 88

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            +GQLG      +   +L   P L++   K  +CGA H+  + E GQ+ SWG N  GQLG
Sbjct: 89  DYGQLG----HEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLG 144

Query: 429 LGD-SIDRNIPSLVPIHGF-LPRNIACGWWHTLLLAETTQI 467
           L   +   + P +V   G  +   IACG  H   L    ++
Sbjct: 145 LNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGEL 185



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           ++ +G    G+LG G  + EN+    E    ++   + ++CG  ++ V+T+ G++ S G 
Sbjct: 28  MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGN 87

Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           N YGQ  LG    R    L+P +  F+ +  ACG +HTL + E  Q+
Sbjct: 88  NDYGQ--LGHEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQL 132



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAHCV 117
           G    LA +E G+L +WGS + EGQ  L S    E+ P        + VV+ A G  H  
Sbjct: 119 GAYHTLAINEWGQLFSWGS-NTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAF 177

Query: 118 SVTEAGEVYTWG 129
           ++T  GE+Y+WG
Sbjct: 178 ALTNNGELYSWG 189


>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
          Length = 1024

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 37/259 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI------PCLEHAA 266
           KI ++  G  H+L LS  G+++ WG    GQLG+G +     TP ++      P  + +A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 267 SGKDRPLLVRQGSVNSSGK----------------------AGRSYVKEIACGGRHSAVV 304
                  L   G++ S GK                           V+ +ACGG HSA++
Sbjct: 199 GEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVY 363
           T  G L TFG G +GQ GH ST ++LRP   + L+  +V QIA G WHT+  +S  G+V+
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVF 318

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGW 421
            FG  + GQLG G  + + +P  L   +  S+  K+ S  +    ++   G   +L W  
Sbjct: 319 SFGSGKDGQLGNGGTRDQLMP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIK 376

Query: 422 NKYGQLGLGDSIDRNIPSL 440
            +   + L     R IP+L
Sbjct: 377 KENSYVNL----KRTIPTL 391



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 40/260 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  + L   +KI  V  G  H LILS  G+ + +       L   S ++          
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQ---------- 136

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                                        + +I CG  HS  ++  G L  +G  L+GQ 
Sbjct: 137 --------------------------EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQL 170

Query: 322 GHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
           G G        P     L  + + QI+AG  H+  +S+ G +Y +G N+ GQLG G  ++
Sbjct: 171 GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTES 230

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           ++ P L+E   L++++ + V+CG  HSA+LT+DG + ++G  K+GQLG   + +   P L
Sbjct: 231 KDDPSLIEG--LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCL 288

Query: 441 VP-IHGFLPRNIACGWWHTL 459
           V  + G+    IACG WHTL
Sbjct: 289 VAELVGYRVTQIACGRWHTL 308



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 12/136 (8%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE---- 388
           + S L + ++ QI  G +H++ +S  G ++ +G N  GQLG G    +   P+++E    
Sbjct: 131 FESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAG 190

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
            P+ +      +S G  HS  L+  G + SWG N+ GQLGLG +  ++ PSL+  +    
Sbjct: 191 VPLAQ------ISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQK 244

Query: 448 PRNIACGWWHTLLLAE 463
              +ACG  H+ LL +
Sbjct: 245 VEFVACGGSHSALLTQ 260



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 40/270 (14%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           E  +++   G  H +++++ GE++ WG +       V R F S  + Q       + +P 
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
            Q    +  +    +     S  + E      G       P L+      K+  VA GG 
Sbjct: 194 AQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           H+ +L+  G ++ +G G  GQLG  S         L PCL     G              
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVG-------------- 294

Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLR--PSYASSLM 339
                   V +IACG  H+ A V+D G + +FG G  GQ G+G T DQL   P   SS  
Sbjct: 295 ------YRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSE 348

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           ++++E       HT   S +  + + GGNQ
Sbjct: 349 ELKLES------HT---SEKELIMIAGGNQ 369


>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 883

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 119/244 (48%), Gaps = 34/244 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G ++ WG    GQLGLG            
Sbjct: 112 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 159

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               H  S KD P L+               V+ +ACGG HSA++T  G L TFG G +G
Sbjct: 160 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 206

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L+  +V QIA G WHT+  +S  G+V+ FG  + GQLG G  
Sbjct: 207 QLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGT 266

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRN 436
             + +P  L   +  S+  K+ S  +    ++   G   +L W   +   + L     R 
Sbjct: 267 LDQLIP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRT 320

Query: 437 IPSL 440
           IP+L
Sbjct: 321 IPTL 324



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 4/157 (2%)

Query: 305 TDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           T +G L  +G  L+GQ G G        P     L  + + QI+AG  H++ +S+ G +Y
Sbjct: 87  TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 146

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
            +G N+FGQLG G  ++++ P L+E   L++++ + ++CG  HSA+LT+DG + ++G  K
Sbjct: 147 SWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVEFLACGGSHSALLTQDGLLFTFGAGK 204

Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           +GQLG   + +   P LV  + G     IACG WHTL
Sbjct: 205 HGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTL 241



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 116/236 (49%), Gaps = 33/236 (13%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++ +V AG  G  T      G+++ WG    GQLG+G +     TP ++   EH A  
Sbjct: 72  GVQVHQVLAGSGGART----PSGELFAWGQNLHGQLGVGRKFPSTTTPQIV---EHLAGV 124

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
              PL                   +I+ G  HS  ++ +G + ++G   +GQ G G T  
Sbjct: 125 ---PL------------------AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTES 163

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           +  PS   +L + +VE +A G  H+  ++ +G ++ FG  + GQLG    Q E  P L+ 
Sbjct: 164 KDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA 223

Query: 389 TPILESKRAKVVSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
              L   R   ++CG  H+ A +++ G+V S+G  K GQLG G ++D+ IP  V +
Sbjct: 224 E--LVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 277



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 14/129 (10%)

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE----TPILESK 395
           +QV Q+ AG       S  G ++ +G N  GQLG G    +   P+++E     P+ +  
Sbjct: 73  VQVHQVLAGSGGARTPS--GELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQ-- 128

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
               +S G  HS  L+  G + SWG N++GQLGLG +  ++ PSL+  +       +ACG
Sbjct: 129 ----ISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACG 184

Query: 455 WWHTLLLAE 463
             H+ LL +
Sbjct: 185 GSHSALLTQ 193


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLVGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 169/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------VGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
          Length = 556

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 86  GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 181 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 240

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 241 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 299 KSNQSYPTPVTV 310



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 204 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 239

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 240 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 299

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 300 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 103 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 162

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 221

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 222 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 281

Query: 466 QI 467
           Q+
Sbjct: 282 QV 283



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 128/331 (38%), Gaps = 91/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 94  PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 188

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             +  T   P          + RR T   + +                         +  
Sbjct: 189 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 214

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G    + + D G+V+ WGY G GQLGLG+     PTP  +  L+           +R
Sbjct: 215 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PTPCRVAALQG----------IR 263

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +
Sbjct: 264 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT 309

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 310 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287


>gi|428164909|gb|EKX33919.1| hypothetical protein GUITHDRAFT_166344 [Guillardia theta CCMP2712]
          Length = 784

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 146/339 (43%), Gaps = 43/339 (12%)

Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE-------EVVKRRKTSSAR 186
           V  A     +GSA S+ K   G   A   +   P D   G        + V    ++   
Sbjct: 132 VCDASKCTSYGSANSYWK-VLGVDKASDMQCMKPQDVVWGSASQPQIVQTVASVDSTFVL 190

Query: 187 EESENPASGD-EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
            + E  A  D ++F   P L+     +   ++AAG  H + L+D+G+VW WG   EGQLG
Sbjct: 191 TKQEMLARPDGKYFRSVPMLINSIQDLHFLELAAGDFHVIALNDLGEVWSWGNNVEGQLG 250

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           +G                   S + +P  V           G + VK +A G  HS V+T
Sbjct: 251 VGD-----------------LSQRSQPAKVVY-------MDGLNTVK-VAAGSYHSLVLT 285

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
           D G + + G    GQ G G  + +  P+    L    +  IA G + +  IS  G V+ +
Sbjct: 286 DFGQVYSMGLNANGQLGLGDYSSRKAPTLIKYLATKNISSIACGDYASYAISDAGEVFAW 345

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARHSAVLTEDGQVLSWGWNK 423
           G N FGQLG       N P L+  P L++  A V  V  G R    + E G V ++G N 
Sbjct: 346 GDNSFGQLGQSAAVTYNEPSLI--PSLKNDGANVYKVFGGQRTIFAIDESGIVYAFGNND 403

Query: 424 YGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTL 459
           YG LGLGD   R  P+   I  F+  N   IA G +HT+
Sbjct: 404 YGMLGLGDKTTRKFPT--KISSFVGANVYVIASGAYHTI 440



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL----TEDGQVL 417
           VYV G N +GQLG G D  E   + L    L   R   ++ G  HS  L    +  G V 
Sbjct: 29  VYVVGYNDWGQLGLG-DYLERTTETLIDSKLPLDRTYGLAAGLYHSVALGDTSSTQGLVY 87

Query: 418 SWGWNKYGQLGLG 430
           +WG N  GQLGLG
Sbjct: 88  TWGRNSKGQLGLG 100


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 116/254 (45%), Gaps = 28/254 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 540 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLI-------------- 585

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 586 ----------QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSP 635

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 636 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 693

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 694 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 753

Query: 452 ACGWWHTLLLAETT 465
           ACG  HTL    ++
Sbjct: 754 ACGRQHTLAFVPSS 767



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 158/377 (41%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  + + V    CG   ++   E G++ T G  + 
Sbjct: 458 WGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 516

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  +V  A G +H +++++ G++++WG           
Sbjct: 517 KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 564

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 565 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 614

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 615 WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 674

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 675 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 707

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 708 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 767

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 768 GLIYAFGCGARGQLGTG 784



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 78/149 (52%), Gaps = 6/149 (4%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
           A RS VKE+ACGG HS  + + G + T G    GQ GH    +  +P    +L D  +  
Sbjct: 486 ADRS-VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVH 542

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGA 404
           +A G  H++ +S  G+++ +G    GQLG    + +  VP+L++   L  +    VSCG 
Sbjct: 543 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK--LNQQTILQVSCGN 600

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
            H   L  DGQ  +WG N +GQLGLG   
Sbjct: 601 WHCLALAADGQFFTWGKNSHGQLGLGKEF 629



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 11/187 (5%)

Query: 288 RSYVKEIACGGRHSAVVTDAG---ALLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQ 342
           R+ V  I     + AV  D      +L +G+   GQ G  S    +   P     + D  
Sbjct: 430 RAPVSHIVTAAYYLAVFVDVSWIRTMLCWGYWSLGQPGISSNLQGIVAEPQVCGFIADRS 489

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
           V+++A G  H+V +  +G VY  G N  GQLG   ++  N P+  +   L  +    V+C
Sbjct: 490 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPE--QIGALADQHIVHVAC 545

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLL 460
           G  HS  L++ GQ+ SWG    GQLGL  + D   +P L+  ++      ++CG WH L 
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 605

Query: 461 LAETTQI 467
           LA   Q 
Sbjct: 606 LAADGQF 612



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 31/278 (11%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG   +LA S+ G+L +WG+  D     +T+      P       + ++++ + G  HC
Sbjct: 544 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 603

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +++   G+ +TWG +       + ++F S  S Q+        +P  Q       +    
Sbjct: 604 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGAHSFALS 660

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           +           +      DE    SPC V L    K+  ++ G  HT +L+  G V+ +
Sbjct: 661 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 720

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G  GQLG  S    V                 R +L   G          S V +IAC
Sbjct: 721 GAGSCGQLGHDSMNDEV---------------NPRRVLELMG----------SEVTQIAC 755

Query: 297 GGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           G +H+ A V  +G +  FG G  GQ G G T +   PS
Sbjct: 756 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPS 793


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 123/262 (46%), Gaps = 41/262 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T  P  + L    KI  V  G  + LILS  G+ + + Y                     
Sbjct: 204 TRKPKCIKLGKKAKIHSVDQGAEYMLILSSDGKPFEYNYS-------------------- 243

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             +EHA     R   + Q             + +I CG  HS  ++  G L  +G  L+G
Sbjct: 244 --IEHA-----RFQCILQ----------EKXIIQITCGDYHSLALSKGGELFAWGQNLHG 286

Query: 320 QCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           Q G GS    +  P    +L  I + QI+AG  H++ +S+ G +Y +G N FGQLG G  
Sbjct: 287 QLGIGSQFASIAIPQIVENLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHT 346

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
             ++ P L+E   L++++ + ++CG  H+A+LT+DG V ++G  K+GQLG   + +   P
Sbjct: 347 DGKDFPSLIEA--LDNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRP 404

Query: 439 SLV-PIHGFLPRNIACGWWHTL 459
            LV  + G     IACG  HTL
Sbjct: 405 RLVTELAGNRVTQIACGRQHTL 426



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 119/250 (47%), Gaps = 35/250 (14%)

Query: 195 GDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           G +F +++ P +V    G+ + +++AG  H++ LS  G ++ WG    GQLGLG      
Sbjct: 291 GSQFASIAIPQIVENLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGH----- 345

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
                         GKD P L+               V+ +ACGG H+A++T  G + TF
Sbjct: 346 ------------TDGKDFPSLIE--------ALDNQKVEFLACGGSHTALLTKDGLVFTF 385

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQ 372
           G G +GQ GH ST ++LRP   + L   +V QIA G  HT+  +S  G+V+ FG  + GQ
Sbjct: 386 GAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQ 445

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLG 430
           LG G    + +P  ++ P   ++     S  +    ++   G   +L W   K   + L 
Sbjct: 446 LGNGGTHNQLIPLPMKLP--SNEELTFESRASEKELIMIAGGNQSILLWMGKKNSYVNL- 502

Query: 431 DSIDRNIPSL 440
               R IP+L
Sbjct: 503 ---RRKIPTL 509



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLET----PIL 392
           L +  + QI  G +H++ +S  G ++ +G N  GQLG G   A   +P+++E     P++
Sbjct: 253 LQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLV 312

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI 451
           +      +S G  HS  L+  G + SWG N +GQLGLG +  ++ PSL+  +       +
Sbjct: 313 Q------ISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFL 366

Query: 452 ACGWWHTLLLAE 463
           ACG  HT LL +
Sbjct: 367 ACGGSHTALLTK 378



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLVP-IHGFLP 448
           IL+ K    ++CG  HS  L++ G++ +WG N +GQLG+G       IP +V  + G   
Sbjct: 252 ILQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPL 311

Query: 449 RNIACGWWHTLLLAETTQI 467
             I+ G  H++ L+ +  I
Sbjct: 312 VQISAGKAHSMALSMSGNI 330


>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 556

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 86  GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 181 WGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNG 240

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 241 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 299 KSNQSYPTPVTV 310



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS I   P P  +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQ-PIPRRV 203

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D+G +  +G+   
Sbjct: 204 TGCLQNKV------------------------VVTIACGQMCCMAVVDSGEVYVWGYNGN 239

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 240 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 299

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 300 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 103 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 162

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRV-TGCLQNKVVVTIACGQMC 221

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 222 CMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 281

Query: 466 QI 467
           Q+
Sbjct: 282 QV 283



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 127/331 (38%), Gaps = 91/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 94  PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 188

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             +  T   P          + RR T   + +                         +  
Sbjct: 189 VGSGSTINQP----------IPRRVTGCLQNKV------------------------VVT 214

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G    + + D G+V+ WGY G GQLGLG+     PT    PC   A  G      +R
Sbjct: 215 IACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQ-PT----PCRVAALQG------IR 263

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +
Sbjct: 264 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT 309

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 310 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S I  PIP R+ G    K V    CG    +A  +SG++  WG  
Sbjct: 178 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 236

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287


>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 918

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 144/294 (48%), Gaps = 43/294 (14%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
           C+  L P  K+   A G  HTL+ ++ G+V+  G   EGQLGLG   +   T HLI    
Sbjct: 80  CVKALKP-EKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGD-TEERSTFHLISFFT 137

Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
                 + +A       L   G +     NS G+ G   V                 I+C
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISC 197

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL----MDIQVEQIAAGLWH 352
           G  HSA VT  G L TFG     +CG     +QL  ++        +  +V Q+A G  H
Sbjct: 198 GYYHSAFVTTEGQLYTFGEP---ECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGH 254

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLT 411
           TV ++ E  VY FG  QFGQLG G    E +VPK +E   ++ ++   ++CG  H+A++T
Sbjct: 255 TVVLT-EKAVYTFGLGQFGQLGLGTFLFETSVPKAIEH--IKDQKISFIACGENHTALIT 311

Query: 412 EDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           + G + ++G  ++G+LGLG  +S ++ IP+L      F+ + ++CG  HTL+ A
Sbjct: 312 DMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 2/174 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+AVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G+VY  GGN  GQLG G D  E     L +     ++ K +S G+  SA LTED
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           G++  WG N  GQ+GL +  +  +P  V + G     I+CG++H+  +    Q+
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTV-GKPISWISCGYYHSAFVTTEGQL 211


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 30/255 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP--SLVPIHGFLPRN 450
            +++   +SCG  H+AVLT+ G V ++G    GQLG  DS++  +    ++ + G     
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-HDSVNDEVNPRRVLELMGSEVTQ 298

Query: 451 IACGWWHTLLLAETT 465
           IACG  HTL L  ++
Sbjct: 299 IACGRQHTLALVPSS 313



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 158/379 (41%), Gaps = 79/379 (20%)

Query: 25  WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
           WGY     PG S     I++ P   R     S K+V CGG     L   E G++ T G  
Sbjct: 4   WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           + +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG         
Sbjct: 61  NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
                GS G     +T    A+P        ++  ++ +   + S         A+  +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158

Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
           FT                   SP  V    G+ + +VAAGG H+  LS  G V+GWG   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
            GQLGL                      KDR  P  V+              V  I+CG 
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-IS 357
            H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  + 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP 311

Query: 358 VEGRVYVFGGNQFGQLGTG 376
             G +Y FG    GQLGTG
Sbjct: 312 SSGLIYAFGCGAKGQLGTG 330



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +KE+ACGG HS  + + G + T G    GQ GH    +  +P    +L D  +  +A G 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+++ +G    GQLG    + +  VP+L++   L  +    VSCG  H   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK--LNQQTILQVSCGNWHCLA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLG 430
           L  DGQ  +WG N +GQLGLG
Sbjct: 152 LAADGQFFTWGKNSHGQLGLG 172



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 31/278 (11%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG   +LA S+ G+L +WG+  D     +T+      P       + ++++ + G  HC
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +++   G+ +TWG +       + ++F S  S Q+        +P  Q       +    
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGAHSFALS 206

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           +           +      DE    SPC V L    K+  ++ G  HT +L+  G V+ +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G  GQLG  S    V                 R +L   G          S V +IAC
Sbjct: 267 GAGSCGQLGHDSVNDEV---------------NPRRVLELMG----------SEVTQIAC 301

Query: 297 GGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           G +H+ A+V  +G +  FG G  GQ G G T +   PS
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPS 339



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 8/162 (4%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G+   GQ G  S    +   P     + D  ++++A G  H+V +  +G VY  G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQL
Sbjct: 61  NTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL 116

Query: 428 GLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 117 GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 708

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 194/460 (42%), Gaps = 60/460 (13%)

Query: 39  LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
           L  +P R+ G      V  GG G +LA    G +  WG+ +  GQ  L  G      EP 
Sbjct: 49  LRRVPVRVLGLSGVVTVAAGG-GHSLAVHSDGTVWAWGN-NSSGQ--LGDGSFDNRAEPV 104

Query: 99  PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
            +   + VV  AAG  H ++V+  G V+ WG              G  G    D+  +  
Sbjct: 105 RVRGLSGVVAVAAGGYHSLAVSADGTVWAWG----------NNSSGQLGDGSFDNRAEPV 154

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKI 214
            +       +    G   +  R         +N      +  EF +  P  V     +++
Sbjct: 155 RVRGSSGVVAVAAGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQV-----LRV 209

Query: 215 T---KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASG 268
           T    V+AG  H+L +S  G VW WG    GQLG+     ++  P  +P +  +   A+G
Sbjct: 210 TGGVTVSAGANHSLAVSADGTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVRGSVAMAAG 269

Query: 269 KDRPLLVRQ-GSV-----NSSGKAGRSY---------------VKEIACGGRHSAVVTDA 307
            +  L VR  G+V     N  G+ G  +               V  +A G  HS  V D 
Sbjct: 270 DNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPGLEGVGAVAAGSNHSLAVRDD 329

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G +  +G  + GQ G G+T     P+    +    V  +AA ++H++ +S +G  + +G 
Sbjct: 330 GTVWAWGSNVEGQRGDGTTGQLSAPTRVPGVS--GVVGVAANVFHSLAVSADGSAWAWGH 387

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  G+LG G     N P  +    L  K    V+ G+ HS  L  DG VL+WG N +GQL
Sbjct: 388 NSHGELGDG--STRNSPAPVRVDGL--KEVVAVAAGSSHSLALLADGTVLAWGDNTFGQL 443

Query: 428 GLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL-LLAETT 465
           G G     ++P+ V  + G +   +A G  H+L LLA+ T
Sbjct: 444 GDGTRASHSVPAQVRGLRGVVA--VAAGSSHSLALLADGT 481



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 114/249 (45%), Gaps = 31/249 (12%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRPL 273
           +AAG  H+L + D G VW WG  G GQLG G  +     P  +P LE     A+G +  L
Sbjct: 266 MAAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDN-SEPGRVPGLEGVGAVAAGSNHSL 324

Query: 274 LVRQ-GSV-----NSSGKAGRSYVKEIACGGR---------------HSAVVTDAGALLT 312
            VR  G+V     N  G+ G     +++   R               HS  V+  G+   
Sbjct: 325 AVRDDGTVWAWGSNVEGQRGDGTTGQLSAPTRVPGVSGVVGVAANVFHSLAVSADGSAWA 384

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G   +G+ G GST +   P     L   +V  +AAG  H++ +  +G V  +G N FGQ
Sbjct: 385 WGHNSHGELGDGSTRNSPAPVRVDGLK--EVVAVAAGSSHSLALLADGTVLAWGDNTFGQ 442

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G   + +VP      +   +    V+ G+ HS  L  DG V +WG+N  GQLG G +
Sbjct: 443 LGDGTRASHSVPA----QVRGLRGVVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGTT 498

Query: 433 IDRNIPSLV 441
             R  P  V
Sbjct: 499 TYRYEPVAV 507



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 178/466 (38%), Gaps = 74/466 (15%)

Query: 11  NEKMEECKETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCG-----GGCGF 62
           N  +    +  V+ WG   +        +P+LS IP R+       +V G      G   
Sbjct: 220 NHSLAVSADGTVWAWGDNSHGQLGIARTTPLLS-IPGRV------PEVRGSVAMAAGDNH 272

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  + G +  WGS    G   L +G   +  EP  +P    V   AAG  H ++V + 
Sbjct: 273 SLAVRDDGTVWAWGS---NGHGQLGNGFMVDNSEPGRVPGLEGVGAVAAGSNHSLAVRDD 329

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G V+ WG       + V    G       D T  Q + PT     S        V     
Sbjct: 330 GTVWAWG-------SNVEGQRG-------DGTTGQLSAPTRVPGVSGVVGVAANVFHSLA 375

Query: 183 SSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
            SA         + +   GD     SP  V ++   ++  VAAG  H+L L   G V  W
Sbjct: 376 VSADGSAWAWGHNSHGELGDGSTRNSPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAW 435

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G    GQLG G+R       H +P       G                      V  +A 
Sbjct: 436 GDNTFGQLGDGTRAS-----HSVPAQVRGLRG----------------------VVAVAA 468

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G  HS  +   G + T+G+ L GQ G G+T  +  P     L    V  +AAG  H++ +
Sbjct: 469 GSSHSLALLADGTVWTWGYNLNGQLGDGTTTYRYEPVAVKGLEG--VVAVAAGGNHSLAV 526

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
             +G  + +G N  GQLG G   +   P  ++        A+ +S        +  DG  
Sbjct: 527 RSDGTAWAWGENVKGQLGDGTLTSRPAPVEVKAAAKAVAAAQGLSL------AVGSDGFP 580

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
            +WG N  GQLG G +  R +P  V   G +   +A G  H+L L+
Sbjct: 581 WAWGNNSSGQLGDGSTTSRPMPMRVQGAGEVVA-VAAGNGHSLALS 625



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 114/256 (44%), Gaps = 34/256 (13%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHL-IPCLEHAASGKDRPL 273
           ++A GG H+L +   G VW  G    GQLG G + ++ VP   L +  +   A+G    L
Sbjct: 14  RIATGGSHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPVRVLGLSGVVTVAAGGGHSL 73

Query: 274 LVR-QGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGALLT 312
            V   G+V     NSSG+ G                S V  +A GG HS  V+  G +  
Sbjct: 74  AVHSDGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGLSGVVAVAAGGYHSLAVSADGTVWA 133

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G    GQ G GS +++  P        +          H++ +  +G ++ +G N +GQ
Sbjct: 134 WGNNSSGQLGDGSFDNRAEPVRVRGSSGVVAVAAGGA--HSLAVRSDGILWAWGDNLYGQ 191

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG   +   + P      +L       VS GA HS  ++ DG V +WG N +GQLG    
Sbjct: 192 LGNRGEFNSSEP----VQVLRVTGGVTVSAGANHSLAVSADGTVWAWGDNSHGQLG---- 243

Query: 433 IDRNIPSLVPIHGFLP 448
           I R  P L+ I G +P
Sbjct: 244 IARTTP-LLSIPGRVP 258



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 7/119 (5%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           +IA G  H++ +  +G V+  GGN  GQLG G      VP      +L       V+ G 
Sbjct: 14  RIATGGSHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVP----VRVLGLSGVVTVAAGG 69

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            HS  +  DG V +WG N  GQLG G   +R  P  V  + G +   +A G +H+L ++
Sbjct: 70  GHSLAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGLSGVVA--VAAGGYHSLAVS 126



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 76/202 (37%), Gaps = 22/202 (10%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   +LA    G + TWG  +  GQ  L  G      EP  +     VV  AAG  H ++
Sbjct: 469 GSSHSLALLADGTVWTWGY-NLNGQ--LGDGTTTYRYEPVAVKGLEGVVAVAAGGNHSLA 525

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           V   G  + WG         V    G       D T      P E    +   A  + + 
Sbjct: 526 VRSDGTAWAWG-------ENVKGQLG-------DGTLTSRPAPVEVKAAAKAVAAAQGLS 571

Query: 179 RRKTSS----AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
               S     A   + +   GD   T  P  + +    ++  VAAG  H+L LS  G VW
Sbjct: 572 LAVGSDGFPWAWGNNSSGQLGDGSTTSRPMPMRVQGAGEVVAVAAGNGHSLALSPEGGVW 631

Query: 235 GWGYGGEGQLGLGS-RIKMVPT 255
            WG    GQLG G+   ++ PT
Sbjct: 632 AWGQNARGQLGEGTLDRRLAPT 653


>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
           familiaris]
 gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 1003

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 144/294 (48%), Gaps = 43/294 (14%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
           C+  L P  K+   A G  HTL+ ++ G+V+  G   EGQLGLG   +   T HLI    
Sbjct: 80  CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGD-TEERSTFHLISFFT 137

Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
                 + +A       L   G +     NS G+ G   V                 I+C
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISC 197

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL----MDIQVEQIAAGLWH 352
           G  HSA VT  G L TFG     +CG     +QL  ++        +  +V Q+A G  H
Sbjct: 198 GYYHSAFVTTEGQLYTFGEP---ECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGH 254

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLT 411
           TV ++ E  VY FG  QFGQLG G    E +VPK +E   ++ ++   ++CG  H+A++T
Sbjct: 255 TVVLT-EKAVYTFGLGQFGQLGLGTFLFETSVPKAIEH--IKDQKISFIACGENHTALIT 311

Query: 412 EDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           + G + ++G  ++G+LGLG  +S ++ IP+L      F+ + ++CG  HTL+ A
Sbjct: 312 DMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 2/174 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+AVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G+VY  GGN  GQLG G D  E     L +     ++ K +S G+  SA LTED
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           G++  WG N  GQ+GL +  +  +P  V + G     I+CG++H+  +    Q+
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTV-GKPISWISCGYYHSAFVTTEGQL 211


>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
          Length = 854

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 119/244 (48%), Gaps = 34/244 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G ++ WG    GQLGLG            
Sbjct: 104 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 151

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               H  S KD P L+               V+ +ACGG HSA++T  G L TFG G +G
Sbjct: 152 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 198

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L+  +V QIA G WHT+  +S  G+V+ FG  + GQLG G  
Sbjct: 199 QLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGT 258

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRN 436
             + +P  L   +  S+  K+ S  +    ++   G   +L W   +   + L     R 
Sbjct: 259 LDQLIP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRT 312

Query: 437 IPSL 440
           IP+L
Sbjct: 313 IPTL 316



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 4/164 (2%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G  S  +   G L  +G  L+GQ G G        P     L  + + QI+AG  H++ +
Sbjct: 72  GNLSRFIVRGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 131

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           S+ G +Y +G N+FGQLG G  ++++ P L+E   L++++ + ++CG  HSA+LT+DG +
Sbjct: 132 SMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVEFLACGGSHSALLTQDGLL 189

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
            ++G  K+GQLG   + +   P LV  + G     IACG WHTL
Sbjct: 190 FTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTL 233



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 27/214 (12%)

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G+++ WG    GQLG+G +     TP ++   EH A     PL                 
Sbjct: 82  GELFAWGQNLHGQLGVGRKFPSTTTPQIV---EHLAG---VPL----------------- 118

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
             +I+ G  HS  ++ +G + ++G   +GQ G G T  +  PS   +L + +VE +A G 
Sbjct: 119 -AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGG 177

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AV 409
            H+  ++ +G ++ FG  + GQLG    Q E  P L+    L   R   ++CG  H+ A 
Sbjct: 178 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAE--LVGNRVTQIACGRWHTLAY 235

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           +++ G+V S+G  K GQLG G ++D+ IP  V +
Sbjct: 236 VSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 269



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 4/106 (3%)

Query: 360 GRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           G ++ +G N  GQLG G    +   P+++E   L       +S G  HS  L+  G + S
Sbjct: 82  GELFAWGQNLHGQLGVGRKFPSTTTPQIVEH--LAGVPLAQISAGEAHSMALSMSGNIYS 139

Query: 419 WGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           WG N++GQLGLG +  ++ PSL+  +       +ACG  H+ LL +
Sbjct: 140 WGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQ 185


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 173/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V    +L
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK-GNWL 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 127/269 (47%), Gaps = 32/269 (11%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L+     + +  ++ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  +  L
Sbjct: 64  PGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKAL 123

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                  AG   + +++CG  HS  ++  G + ++G   +GQ G
Sbjct: 124 -----------------------AGIKII-QVSCGHYHSLALSQDGQVFSWGNNSHGQLG 159

Query: 323 HGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G     Q  P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        
Sbjct: 160 LGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALS---GN 216

Query: 382 NVPKLLETP----ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           NVP     P     L+      +SCG+ H+AVLT+DG+V ++G N  GQLG G + ++  
Sbjct: 217 NVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRG 276

Query: 438 PSLVPIHGFLPRNIACGWWHTLLLAETTQ 466
           P LV     L   I CG +HTL+   TT+
Sbjct: 277 PQLVEGIDGLVSQIDCGSYHTLVYVYTTR 305



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 104/229 (45%), Gaps = 37/229 (16%)

Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
              +P  V    G+KI +V+ G  H+L LS  GQV+ WG    GQLGLG       +P  
Sbjct: 113 LNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQR 172

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           +  LE        PL                   ++A GG HS  ++ +G   +FGWG  
Sbjct: 173 VKSLEGI------PL------------------AQVAAGGAHSFALSLSGT--SFGWGSN 206

Query: 319 --GQCGHGSTN---DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
             GQ      N      +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N  GQL
Sbjct: 207 NAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQL 266

Query: 374 GTGVDQAENVPKLLE-TPILESKRAKVVSCGARHSAV-LTEDGQVLSWG 420
           G G    +  P+L+E    L S+    + CG+ H+ V +    QV+S+G
Sbjct: 267 GHGPTAEKRGPQLVEGIDGLVSQ----IDCGSYHTLVYVYTTRQVISFG 311



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 3/179 (1%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
           AG + +++ A G RHS ++   G +   G    GQ G      + RP    +L  + V+ 
Sbjct: 18  AGGAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDL 77

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           ++ G  H++ +  +GRV+ +G    GQLG G  +  N    ++   L   +   VSCG  
Sbjct: 78  LSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTP-MKVKALAGIKIIQVSCGHY 136

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           HS  L++DGQV SWG N +GQLGLG + + +  P  V  + G     +A G  H+  L+
Sbjct: 137 HSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALS 195



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +  +G V+  G N  GQLG         P L++   LE+    ++S
Sbjct: 22  ELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQA--LETLNVDLLS 79

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+  + N   +    + G     ++CG +H+L
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSL 139

Query: 460 LLAETTQI 467
            L++  Q+
Sbjct: 140 ALSQDGQV 147


>gi|221108961|ref|XP_002157481.1| PREDICTED: regulator of chromosome condensation-like [Hydra
           magnipapillata]
          Length = 441

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 176/421 (41%), Gaps = 81/421 (19%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAGW 113
           CGG     +  SE G++ +WG  DD      T G  GE   P    LP    VV A+AG 
Sbjct: 79  CGGM--HTIGVSEHGEVYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQGIRVVYASAGD 136

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
           +H  ++T+ G V+ WG           RD          S GK++               
Sbjct: 137 SHSAALTDDGRVFAWG---------AYRDASGQIGLTAASIGKKN--------------- 172

Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
            EV+K        ++ ++PA                      KV +G  HT+IL+  G +
Sbjct: 173 -EVIK---IYPKGDQIDDPA---------------------VKVVSGNDHTVILTSEGLI 207

Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
           +  G G +GQLG   RIK         C  H    +   +++    V    K    +  +
Sbjct: 208 YTSGTGEQGQLG---RIK--------ECFGHRGGRRGLEIILSPQVVRFRKK---QFFSD 253

Query: 294 IACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE-----QIA 347
           I  G   + A+  D   +  +G   YGQ G G+T +   P    SL +I+       QI 
Sbjct: 254 IFAGSFCTFALSRDTNDVYAWGLNNYGQLGSGTTENFFNPEVIQSLSEIREHANGYLQIH 313

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH 406
            G  H++     G+ Y  G +++G+LG G D  E ++PK +++  LE +    ++CG   
Sbjct: 314 GGQHHSIVADGNGKTYSIGRSEYGRLGLGKDAKETSLPKKIDS--LEKENVVKIACGEAV 371

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF-LPRN----IACGWWHTLLL 461
           S  +T+ G + SWG     QLG+GD  D   PSLV  +   L ++    ++ G  HT +L
Sbjct: 372 SFAVTDKGHLYSWGLGTSLQLGVGDDEDIFDPSLVQSNNLTLAQDEVLAVSAGGQHTAIL 431

Query: 462 A 462
            
Sbjct: 432 V 432



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 14/160 (8%)

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSY 334
           ++ +++ S K+   Y K      +   +V   G +LT G G  GQ G G +  ++ RP+ 
Sbjct: 12  KRKTIDESIKSPEKYAK------KDDKLVQKVGHILTLGQGDVGQLGLGENVLERKRPAM 65

Query: 335 ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT---GVDQAENVPKLLETPI 391
              +  +   Q+  G  HT+ +S  G VY +G N  G LG    G D  E +P+ +  P 
Sbjct: 66  IKEVEGVNFIQVTCGGMHTIGVSEHGEVYSWGCNDDGALGRPTEGTDGEEFIPRKVLLP- 124

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGL 429
            +  R    S G  HSA LT+DG+V +WG   +  GQ+GL
Sbjct: 125 -QGIRVVYASAGDSHSAALTDDGRVFAWGAYRDASGQIGL 163



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 110/258 (42%), Gaps = 43/258 (16%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P ++    GV   +V  GG HT+ +S+ G+V+ WG   +G   LG   +       IP  
Sbjct: 63  PAMIKEVEGVNFIQVTCGGMHTIGVSEHGEVYSWGCNDDG--ALGRPTEGTDGEEFIP-- 118

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY---- 318
                   R +L+ QG       AG S          HSA +TD G +  F WG Y    
Sbjct: 119 --------RKVLLPQGIRVVYASAGDS----------HSAALTDDGRV--FAWGAYRDAS 158

Query: 319 GQCGH-----GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           GQ G      G  N+ ++       +D    ++ +G  HTV ++ EG +Y  G  + GQL
Sbjct: 159 GQIGLTAASIGKKNEVIKIYPKGDQIDDPAVKVVSGNDHTVILTSEGLIYTSGTGEQGQL 218

Query: 374 GT-----GVDQAENVPKLLETPILESKRAKV----VSCGARHSAVLTED-GQVLSWGWNK 423
           G      G        +++ +P +   R K     +  G+  +  L+ D   V +WG N 
Sbjct: 219 GRIKECFGHRGGRRGLEIILSPQVVRFRKKQFFSDIFAGSFCTFALSRDTNDVYAWGLNN 278

Query: 424 YGQLGLGDSIDRNIPSLV 441
           YGQLG G + +   P ++
Sbjct: 279 YGQLGSGTTENFFNPEVI 296



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 34/212 (16%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           ++  +G +   G G  GQLGLG  +     P +I  +E                      
Sbjct: 33  LVQKVGHILTLGQGDVGQLGLGENVLERKRPAMIKEVE---------------------- 70

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGW---GLYGQCGHGSTNDQLRPSYASSLMDIQ 342
            G +++ ++ CGG H+  V++ G + ++G    G  G+   G+  ++  P        I+
Sbjct: 71  -GVNFI-QVTCGGMHTIGVSEHGEVYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQGIR 128

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGG-----NQFGQLGTGVDQAENVPKLL-ETPILESKR 396
           V   +AG  H+  ++ +GRV+ +G       Q G     + +   V K+  +   ++   
Sbjct: 129 VVYASAGDSHSAALTDDGRVFAWGAYRDASGQIGLTAASIGKKNEVIKIYPKGDQIDDPA 188

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            KVVS G  H+ +LT +G + + G  + GQLG
Sbjct: 189 VKVVS-GNDHTVILTSEGLIYTSGTGEQGQLG 219


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 30/255 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP--SLVPIHGFLPRN 450
            +++   +SCG  H+AVLT+ G V ++G    GQLG  DS++  +    ++ + G     
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-HDSVNDEVNPRRVLELMGSEVTQ 298

Query: 451 IACGWWHTLLLAETT 465
           IACG  HTL L  ++
Sbjct: 299 IACGRQHTLALVPSS 313



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 158/379 (41%), Gaps = 79/379 (20%)

Query: 25  WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
           WGY     PG S     I++ P   R     S K+V CGG     L   E G++ T G  
Sbjct: 4   WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           + +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG         
Sbjct: 61  NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
                GS G     +T    A+P        ++  ++ +   + S         A+  +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158

Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
           FT                   SP  V    G+ + +VAAGG H+  LS  G V+GWG   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
            GQLGL                      KDR  P  V+              V  I+CG 
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-IS 357
            H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  + 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP 311

Query: 358 VEGRVYVFGGNQFGQLGTG 376
             G +Y FG    GQLGTG
Sbjct: 312 SSGLIYAFGCGAKGQLGTG 330



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +KE+ACGG HS  + + G + T G    GQ GH    +  +P    +L D  +  +A G 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+++ +G    GQLG    + +  VP+L++   L  +    VSCG  H   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK--LNQQTILQVSCGNWHCLA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLG 430
           L  DGQ  +WG N +GQLGLG
Sbjct: 152 LAADGQFFTWGKNSHGQLGLG 172



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 31/278 (11%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG   +LA S+ G+L +WG+  D     +T+      P       + ++++ + G  HC
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +++   G+ +TWG +       + ++F S  S Q+        +P  Q       +    
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGAHSFALS 206

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           +           +      DE    SPC V L    K+  ++ G  HT +L+  G V+ +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G  GQLG  S    V                 R +L   G          S V +IAC
Sbjct: 267 GAGSCGQLGHDSVNDEV---------------NPRRVLELMG----------SEVTQIAC 301

Query: 297 GGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           G +H+ A+V  +G +  FG G  GQ G G T +   PS
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPS 339



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 8/162 (4%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G+   GQ G  S    +   P     + D  ++++A G  H+V +  +G VY  G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQL
Sbjct: 61  NTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL 116

Query: 428 GLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 117 GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 119/234 (50%), Gaps = 33/234 (14%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
           + D+ FTLSP  ++   G  + ++A       H+L L+D G+V+ WG G  G+LG G+  
Sbjct: 554 NSDDLFTLSP--ISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGN-- 609

Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
                              DR    RQ       +     V  +ACG +HSAVVT  G L
Sbjct: 610 ------------------SDRQRRPRQIEALRGEE-----VVNMACGFKHSAVVTVDGKL 646

Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQ 369
            TFG G YG+ GHG++ ++  P   ++L    + Q+A GL HT+ +S +G  V+ FG   
Sbjct: 647 FTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGD 706

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
           +G+LG G   A+  P+ ++  +L     K + CG + S VLT DG+V S+G  +
Sbjct: 707 YGKLGLGSCTAKTSPQAID--VLAGIGCKKICCGTQFSVVLTNDGRVFSFGQER 758



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 26/254 (10%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           +V  G   T ++   G +   G G  G+LG+G+   +                   P+  
Sbjct: 522 QVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLS---------------PISA 566

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
            QG V       R           HS  +TD+G + ++G G YG+ GHG+++ Q RP   
Sbjct: 567 LQGYVVIQIATSRG-------SDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQI 619

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
            +L   +V  +A G  H+  ++V+G+++ FG   +G+LG G    +  P+ +    LE  
Sbjct: 620 EALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTA--LEKH 677

Query: 396 RAKVVSCGARHSAVLTEDGQ-VLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIAC 453
               V+CG  H+ VL+ DG  V ++G   YG+LGLG    +  P  + +  G   + I C
Sbjct: 678 AIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICC 737

Query: 454 GWWHTLLLAETTQI 467
           G   +++L    ++
Sbjct: 738 GTQFSVVLTNDGRV 751



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 6/175 (3%)

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL- 350
           +++ CG   + VV   G +L  G G YG+ G G+++D    S  S+L    V QIA    
Sbjct: 521 QQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRG 580

Query: 351 --WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
              H++ ++  G V+ +G   +G+LG G    +  P+ +E   L  +    ++CG +HSA
Sbjct: 581 SDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LRGEEVVNMACGFKHSA 638

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
           V+T DG++ ++G   YG+LG G+S ++  P  V  +       +ACG  HTL+L+
Sbjct: 639 VVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTLVLS 693



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 135/359 (37%), Gaps = 93/359 (25%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGW 113
           G  G +LA ++SG++ +WG  D     Y   G      +  P   EA     VV  A G+
Sbjct: 580 GSDGHSLALTDSGEVFSWGDGD-----YGKLGHGNSDRQRRPRQIEALRGEEVVNMACGF 634

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
            H   VT  G+++T+G            D+G  G                    ++K+  
Sbjct: 635 KHSAVVTVDGKLFTFG----------NGDYGRLG----------------HGNSANKKTP 668

Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-DMGQ 232
           E V    K +                              I +VA G  HTL+LS D   
Sbjct: 669 ERVTALEKHA------------------------------IGQVACGLNHTLVLSADGNT 698

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           VW +G G  G+LGLGS      +P  I  L  A  G                       K
Sbjct: 699 VWAFGDGDYGKLGLGS-CTAKTSPQAIDVL--AGIG----------------------CK 733

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           +I CG + S V+T+ G + +FG         G      +P    +L    ++ +  G  H
Sbjct: 734 KICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEH 793

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
            + ++  G V+ +G N  GQLG G   A+  P ++  P L+ K  + +S G  HSA  T
Sbjct: 794 VLALTSTGEVWGWGNNVDGQLGLGHSNAQREPCVI--PDLKGKNIRQISAGRNHSAAWT 850



 Score = 38.5 bits (88), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 19/114 (16%)

Query: 363 YVFGGNQFGQL---GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           Y++GG + GQL   G GV    NVP +  T  L S  A+ V CG   + V+  +G +L+ 
Sbjct: 491 YLWGGGRHGQLAESGRGV----NVPTV--TKSLAS--AQQVVCGQNCTFVVQVNGTILAC 542

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPI---HGFLPRNIACGW---WHTLLLAETTQI 467
           G   YG+LG+G+S D  + +L PI    G++   IA       H+L L ++ ++
Sbjct: 543 GEGSYGRLGMGNSDD--LFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEV 594


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 135/290 (46%), Gaps = 40/290 (13%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR------IKMVPTP 256
           PC  T +    + +VA GG+HTL L + GQV+  G+ GEGQLG          +  +   
Sbjct: 25  PCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAPVATLAEE 84

Query: 257 HLIPCLEHAASGKDRPL-LVRQGSVNSSG-----------------------KAGRSYVK 292
           H    ++H A G+   L L  QG++ S G                       K  +  ++
Sbjct: 85  H----IKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQ 140

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLW 351
           +++CG  H   + D G L T+G   +GQ G G+    Q  P    SL  I + Q+ AG  
Sbjct: 141 QMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGS 200

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           H+  +S+ G V+ +G N  GQLG   +Q +  P       L + +   +SCG  H+A+LT
Sbjct: 201 HSFALSLSGAVFGWGKNSAGQLGLNDEQVKETP--CHVKPLRTHKVVYISCGEEHTAILT 258

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIP--SLVPIHGFLPRNIACGWWHTL 459
           + G + ++G    GQLG  DS+   I    ++ + G     IACG  HTL
Sbjct: 259 KAGGLFTFGAGGSGQLG-HDSLHNEINPRRVLELMGSEVSQIACGRKHTL 307



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 155/386 (40%), Gaps = 74/386 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
           +G L      K+ +  P           K+V  GG    L   E G++ + G  + EGQ 
Sbjct: 9   FGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGG-KHTLFLMEDGQVYSCG-WNGEGQ- 65

Query: 85  YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
            L     G  P P     E  +   A G +H ++++  G +Y+WG              G
Sbjct: 66  -LGHSHEGTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGA-------------G 111

Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD--EFFT-- 200
           + G     +    S +P         R  +++ +++    +  +    A GD  + FT  
Sbjct: 112 NDGQLGHATVEHYSRIP---------RIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWG 162

Query: 201 ----------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
                            SP  V    G+ + +V AGG H+  LS  G V+GWG    GQL
Sbjct: 163 QNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQL 222

Query: 245 GLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
           GL   ++K  P  H+ P   H                          V  I+CG  H+A+
Sbjct: 223 GLNDEQVKETPC-HVKPLRTHK-------------------------VVYISCGEEHTAI 256

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRV 362
           +T AG L TFG G  GQ GH S ++++ P     LM  +V QIA G  HT+  +   G +
Sbjct: 257 LTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTL 316

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLE 388
           Y FG    GQLGTG +     P +++
Sbjct: 317 YAFGCGDLGQLGTGHENNVKCPTVVK 342



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 28/197 (14%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG+   GQLG G  +K   +    PC                    +   +  + VKE+A
Sbjct: 4   WGHSAFGQLGNGHSLKNAVSE---PC--------------------ACTFSLATCVKEVA 40

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGG+H+  + + G + + GW   GQ GH  +++   P+  ++L +  ++ IA G  H++ 
Sbjct: 41  CGGKHTLFLMEDGQVYSCGWNGEGQLGH--SHEGTHPAPVATLAEEHIKHIACGQSHSLA 98

Query: 356 ISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
           +S++G +Y +G    GQLG   V+    +P++++   L  ++ + +SCG  H   L +DG
Sbjct: 99  LSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKK--LSQQKIQQMSCGDDHCLALGDDG 156

Query: 415 QVLSWGWNKYGQLGLGD 431
           Q+ +WG N +GQLGLG+
Sbjct: 157 QLFTWGQNTHGQLGLGN 173



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 310 LLTFGWGLYGQCGHGST--NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G+G +  N    P   +  +   V+++A G  HT+ +  +G+VY  G 
Sbjct: 1   MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGW 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +     P       L  +  K ++CG  HS  L+  G + SWG    GQL
Sbjct: 61  NGEGQLGHSHEGTHPAP----VATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQL 116

Query: 428 G 428
           G
Sbjct: 117 G 117


>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
          Length = 791

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 129/263 (49%), Gaps = 44/263 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G KI ++AAG  H+L L+  G V+ WG   EGQLGL     +V  P  +   E       
Sbjct: 144 GSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPE------- 196

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                               VK+I+ G  HS  +T++G +   G    G+ G       +
Sbjct: 197 -------------------PVKQISAGYYHSTFLTESGLVYVCGESESGKLG-------I 230

Query: 331 RPSYASSLMDIQVE------QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NV 383
             S+++ +   Q++       +A G  HTV ++  G +Y  G N  GQLG G + +E ++
Sbjct: 231 DASFSTQVAPKQMQLPSPAVHVACGGHHTVILAENGNLYCTGSNSSGQLGLGTNLSELHI 290

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           PKLL   +L ++    +SCG  H+AV+TE G++ + G  ++G+LGL ++ + N+  L  +
Sbjct: 291 PKLLPRGMLRNETITRISCGESHTAVVTESGKLYTCGDGRHGKLGLEEN-ENNVHELTFV 349

Query: 444 HGF---LPRNIACGWWHTLLLAE 463
             +      ++ACG  HT+L+ +
Sbjct: 350 QRYKELFVSDVACGGCHTILVGQ 372



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 132/272 (48%), Gaps = 43/272 (15%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           C+  L P  ++T VA G  HTLI +   +++  G   EGQLG G              + 
Sbjct: 81  CVKALKPE-RVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRG--------------IS 125

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG- 322
                 + P+LV       SG +G S + +IA G  HS  +T  G +  +G  L GQ G 
Sbjct: 126 AIGDSVNTPVLVYD-----SGLSG-SKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGL 179

Query: 323 ---HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
               G  N   +P+     +   V+QI+AG +H+  ++  G VYV G ++ G+LG     
Sbjct: 180 PDVSGLVN---KPTKVH--IPEPVKQISAGYYHSTFLTESGLVYVCGESESGKLGIDASF 234

Query: 380 AENV-PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NI 437
           +  V PK ++ P      A  V+CG  H+ +L E+G +   G N  GQLGLG ++   +I
Sbjct: 235 STQVAPKQMQLP----SPAVHVACGGHHTVILAENGNLYCTGSNSSGQLGLGTNLSELHI 290

Query: 438 PSLVPIHGFLPRN-----IACGWWHTLLLAET 464
           P L+P  G L RN     I+CG  HT ++ E+
Sbjct: 291 PKLLP-RGML-RNETITRISCGESHTAVVTES 320



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 13/185 (7%)

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
           R  V  I CG  HSAV+   G L  FG   +GQ G G  N   +PS   +L   +V  +A
Sbjct: 35  RDPVLSITCGDEHSAVICQTGRLFVFGSNDWGQLGLGHKNHISKPSCVKALKPERVTHVA 94

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVD---QAENVPKLLETPILESKRAKVVSCGA 404
            G  HT+  +   +++  G +Q GQLG G+     + N P L+    L   +   ++ G+
Sbjct: 95  CGRAHTLICTGSQKIFACGSDQEGQLGRGISAIGDSVNTPVLVYDSGLSGSKIVQIAAGS 154

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLP---RNIACGWWHTL 459
            HS  LT DG V +WG N  GQLGL D     +  LV  P    +P   + I+ G++H+ 
Sbjct: 155 HHSLALTSDGGVFAWGSNLEGQLGLPD-----VSGLVNKPTKVHIPEPVKQISAGYYHST 209

Query: 460 LLAET 464
            L E+
Sbjct: 210 FLTES 214


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 173/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V    +L
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK-GNWL 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVTV 305



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS I   P P  +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D+G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVTIACGQMCCMAVVDSGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRV-TGCLQNKVVVTIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 217 CMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 127/331 (38%), Gaps = 91/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 183

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             +  T   P          + RR T   + +                         +  
Sbjct: 184 VGSGSTINQP----------IPRRVTGCLQNKV------------------------VVT 209

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G    + + D G+V+ WGY G GQLGLG+     PTP  +  L+           +R
Sbjct: 210 IACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQ-PTPCRVAALQG----------IR 258

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +
Sbjct: 259 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT 304

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S I  PIP R+ G    K V    CG    +A  +SG++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 118/245 (48%), Gaps = 32/245 (13%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  V+ G  HTL L+D GQV+ WG G  GQLGL +  + V  P  I CL           
Sbjct: 86  IVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQ------- 138

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG---HGSTNDQL 330
                            + ++ACG  HS  ++  G + ++G   +GQ G   HGS+    
Sbjct: 139 -----------------IAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST- 180

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P    SL  I   Q++AG  H+  I++ G V+ +G N+FGQLG    +    P LL++ 
Sbjct: 181 -PQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKS- 238

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIHGFLPR 449
            L S+R   VSCG  H+A LT+   V ++G   YGQLG    + + N   +  + G +  
Sbjct: 239 -LRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKVFELMGNVVT 297

Query: 450 NIACG 454
            I+CG
Sbjct: 298 QISCG 302



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 118/248 (47%), Gaps = 31/248 (12%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   + P       G ++  V  G +HT+ L D G V+  G    GQLG          
Sbjct: 18  DEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   +           +  ++CG  H+  + D G + ++G 
Sbjct: 68  --------HEKSRKKPEHVVALDA---------QIIVAVSCGESHTLALNDKGQVFSWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           G  GQ G  +  + +R P     L D+Q+ Q+A G WH+  +S  G+V+ +G NQFGQLG
Sbjct: 111 GSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLG 170

Query: 375 TGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
            G+   + + P+++++  L+      +S G  HS  +T  G V  WG NK+GQLGL D+ 
Sbjct: 171 LGMHGSSISTPQIIQS--LQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTK 228

Query: 434 DRNIPSLV 441
           DR  P+L+
Sbjct: 229 DRWFPALL 236



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 126/338 (37%), Gaps = 88/338 (26%)

Query: 42  IPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           +  R C     K VC  GCG    +   + G + T G  +D GQ  L   K  + PE   
Sbjct: 23  VEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEHVV 79

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
                 +V  + G +H +++ + G+V++WG              GS G    ++  +   
Sbjct: 80  ALDAQIIVAVSCGESHTLALNDKGQVFSWG-------------LGSNGQLGLNNFEECVR 126

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
           +P      SD                                          V+I +VA 
Sbjct: 127 VPRNIKCLSD------------------------------------------VQIAQVAC 144

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPL 273
           G  H+  LS  GQV+ WG    GQLGLG     + TP +      IP  + +A G     
Sbjct: 145 GYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFA 204

Query: 274 LVRQGSV-----NSSGKAGRSYVKE-----------------IACGGRHSAVVTDAGALL 311
           +   G+V     N  G+ G +  K+                 ++CG  H+A +T    + 
Sbjct: 205 ITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVF 264

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
           TFG G YGQ GH  TN ++ P     LM   V QI+ G
Sbjct: 265 TFGAGGYGQLGHNCTNHEINPRKVFELMGNVVTQISCG 302



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  ++++   P         +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+      L+++    VSCG  H+  L + GQV SWG    GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--HVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQL 116

Query: 428 GLGD-----SIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL +      + RNI  L  +       +ACG+WH+  L++  Q+
Sbjct: 117 GLNNFEECVRVPRNIKCLSDVQ---IAQVACGYWHSHALSKGGQV 158


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 21/281 (7%)

Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG---LGSRIKMVPT 255
             L P  V+L  G  I +VA GG H L L+  G V+ +G   + ++    + +    +P 
Sbjct: 464 LVLRPKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPD 523

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                 +  + S    P LV + ++  +    R+ +  +ACG +HS  +TDAG L T+G 
Sbjct: 524 NESTRVV--STSSFLAPHLVEELALEKA--LHRTTIAMVACGAQHSLAITDAGELYTWGS 579

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           G  G+ GHG   D+  P    SL+   V   + G  HT  ++ +G V+ FG  + G+LG 
Sbjct: 580 GEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGL 639

Query: 376 GVDQAENVPKLLETPIL---ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           G ++  + P     PI+   +     +V CG   +A L   G V +WG    GQ GLG  
Sbjct: 640 GDNKWRDTPH----PIVGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLG-Y 694

Query: 433 IDRN------IPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           +DR+      +  L  + G    ++ACG+ HT++L  + ++
Sbjct: 695 VDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGEL 735



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 172/411 (41%), Gaps = 85/411 (20%)

Query: 95  PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
           P+   L     +V+ A G  H + +T  G+VY++G  E                      
Sbjct: 468 PKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNE---------------------- 505

Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV---TLNPG 211
                         DK+     V    ++    ES    S   F  L+P LV    L   
Sbjct: 506 --------------DKKVAAVTVATHTSTLPDNESTRVVSTSSF--LAPHLVEELALEKA 549

Query: 212 VK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAAS 267
           +    I  VA G +H+L ++D G+++ WG G +G+LG G  R + VP   +    E   S
Sbjct: 550 LHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVS 609

Query: 268 ----GKDRPLLVRQGSVNS--SGKAGR---------------------SYVKEIACGGRH 300
               G    +L  +GSV +   G+ GR                     + +  + CG   
Sbjct: 610 ASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNF 669

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDI---QVEQIAAGLWHTVCI 356
           +A +   G++ T+G    GQCG G  + DQ+ P     L D+    V  +A G  HTV +
Sbjct: 670 TAALDRQGSVFTWGKTGEGQCGLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVL 729

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP---ILESKRAKVVSCGARHSAVLTED 413
           +  G +Y +G  ++GQLGTG D  + +P  ++ P   +    +   V CGA HS   TE 
Sbjct: 730 TASGELYSWGLGEYGQLGTG-DVYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQ 788

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLL 461
             + +WG N YG  GLG + +++ P    I  F  +    +ACG  +T+ L
Sbjct: 789 RVMFAWGLNSYGACGLGHTANKDKPE--RIDCFSSQTELVVACGHKYTIAL 837


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  110 bits (276), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 101/377 (26%), Positives = 161/377 (42%), Gaps = 94/377 (24%)

Query: 95   PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
            P P PL  E   +K + GW H   ++E+GE++TWG                     K+ +
Sbjct: 1210 PMP-PLKNEKRAIKVSCGWDHVALISESGELFTWG---------------------KNQS 1247

Query: 155  GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
            G+                G ++ K + T         P   + F   SP          I
Sbjct: 1248 GQLGH-------------GLDIGKIQTT---------PKRLEFFRGKSP----------I 1275

Query: 215  TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
              V  GG H++ +     V+ WG    GQLG G++                +  ++RP +
Sbjct: 1276 IMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTK----------------SVSQNRPKI 1319

Query: 275  VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
            +     + SG+     ++ IA G  H+ V+  +G L +FG+G  GQ GHGS   +  P+ 
Sbjct: 1320 IE----DISGQK----IQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTR 1371

Query: 335  A--SSLMDIQ-----VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
               ++++ IQ     + QIA G  H+V  S  G VY +G  + GQLG G  ++   P+L+
Sbjct: 1372 IELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLI 1431

Query: 388  ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
            E      K    +SCG  ++   T+   V SWG  ++ +LG G   +   P +V    F+
Sbjct: 1432 EA----LKGVTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDF--FI 1485

Query: 448  PRN---IACGWWHTLLL 461
             +N   I CG  HT+ L
Sbjct: 1486 QKNVSKIVCGLNHTITL 1502



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 111/484 (22%), Positives = 184/484 (38%), Gaps = 113/484 (23%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ--SYLTSGK 90
            P+   ++ P+P       + K  CG         SESG+L TWG  +  GQ    L  GK
Sbjct: 1202 PDPELMICPMPPLKNEKRAIKVSCG--WDHVALISESGELFTWGK-NQSGQLGHGLDIGK 1258

Query: 91   HGETPEPFPL-PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
               TP+       ++ ++    G  H + V     VY+WG  +          FG  G  
Sbjct: 1259 IQTTPKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQDK----------FGQLGHG 1308

Query: 150  QKDSTGKQSALPTE------QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS- 202
             K  +  +  +  +      QA  +       + K  +  S     +       F + S 
Sbjct: 1309 TKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSI 1368

Query: 203  PCLVTLNP-------GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
            P  + LN        G KIT++A G  H++I SD G+V+ WG G +GQLG G+  + +  
Sbjct: 1369 PTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGN-YESIAR 1427

Query: 256  PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
            P LI  L+                           V +I+CG  ++   TD   + ++G 
Sbjct: 1428 PRLIEALKG--------------------------VTKISCGHFYTMATTDLKNVYSWGL 1461

Query: 316  GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV----------------- 358
            G + + GHGS  ++  P      +   V +I  GL HT+ ++                  
Sbjct: 1462 GEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVND 1521

Query: 359  -------------------------EGR-----------VYVFGGNQFGQLGTGVD-QAE 381
                                      GR           +Y  G  + G+LG G D ++ 
Sbjct: 1522 FIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLKSP 1581

Query: 382  NVPKLLETPI--LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
               K + T I  + +     +SCG   +A++T +G +  WG+  +GQ+G G + D  +P 
Sbjct: 1582 FFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAWVPI 1641

Query: 440  LVPI 443
             +P+
Sbjct: 1642 RIPL 1645



 Score = 47.8 bits (112), Expect = 0.013,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 105/265 (39%), Gaps = 51/265 (19%)

Query: 214  ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-----PCLEHAASG 268
            +TK++ G  +T+  +D+  V+ WG G   +LG GS  K   TP ++       +     G
Sbjct: 1437 VTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSD-KNEATPRVVDFFIQKNVSKIVCG 1495

Query: 269  KDRPL-LVRQGSVNSSGKAGRSYVKEI-------------------ACGGRHSAV----V 304
             +  + L   G +N++  +    V +                       GR   +     
Sbjct: 1496 LNHTITLTYPGDLNNNSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNEN 1555

Query: 305  TDAGALLTFGWGLYGQCGHGST-----NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            +    +   G G +G+ G G        D+  P+    +  + +  I+ G   T  I+  
Sbjct: 1556 SQVSPIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSN 1615

Query: 360  GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
            G +YV+G   FGQ+G G      VP  +  P+ +SK        A  S++ +++ +    
Sbjct: 1616 GALYVWGYGNFGQIGNGKTDDAWVP--IRIPLTDSK--------ANQSSLQSDNKK---- 1661

Query: 420  GWNKYGQLGLGDSIDRNIPSLVPIH 444
               +Y Q GL D +  N+ S  P H
Sbjct: 1662 --QRYSQEGLEDILRSNVHSYRPFH 1684


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         +I  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ ++  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V EIACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 30/255 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP--SLVPIHGFLPRN 450
            +++   +SCG  H+AVLT+ G V ++G    GQLG  DS++  +    ++ + G     
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-HDSVNDEVNPRRVLELMGSEVTQ 298

Query: 451 IACGWWHTLLLAETT 465
           IACG  HTL L  ++
Sbjct: 299 IACGRQHTLALVPSS 313



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 158/379 (41%), Gaps = 79/379 (20%)

Query: 25  WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
           WGY     PG S     I++ P   R     S K+V CGG     L   E G++ T G  
Sbjct: 4   WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           + +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG         
Sbjct: 61  NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
                GS G     +T    A+P        ++  ++ +   + S         A+  +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158

Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
           FT                   SP  V    G+ + +VAAGG H+  LS  G V+GWG   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
            GQLGL                      KDR  P  V+              V  I+CG 
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-IS 357
            H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  + 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP 311

Query: 358 VEGRVYVFGGNQFGQLGTG 376
             G +Y FG    GQLGTG
Sbjct: 312 SSGLIYAFGCGAKGQLGTG 330



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +KE+ACGG HS  + + G + T G    GQ GH    +  +P    +L D  +  +A G 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+++ +G    GQLG    + +  VP+L++   L  +    VSCG  H   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK--LNQQTILQVSCGNWHCLA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLG 430
           L  DGQ  +WG N +GQLGLG
Sbjct: 152 LAADGQFFTWGKNSHGQLGLG 172



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 31/278 (11%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG   +LA S+ G+L +WG+  D     +T+      P       + ++++ + G  HC
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +++   G+ +TWG +       + ++F S  S Q+        +P  Q       +    
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGAHSFALS 206

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           +           +      DE    SPC V L    K+  ++ G  HT +L+  G V+ +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G  GQLG  S    V                 R +L   G          S V +IAC
Sbjct: 267 GAGSCGQLGHDSVNDEV---------------NPRRVLELMG----------SEVTQIAC 301

Query: 297 GGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           G +H+ A+V  +G +  FG G  GQ G G T +   PS
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPS 339



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 8/162 (4%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G+   GQ G  S    +   P     + D  ++++A G  H+V +  +G VY  G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQL
Sbjct: 61  NTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL 116

Query: 428 GLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 117 GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
          Length = 451

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 86  GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 181 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 240

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 241 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 299 KSNQSYPTPVTV 310



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 204 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 239

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 240 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 299

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 300 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 103 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 162

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 221

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 222 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 281

Query: 466 QI 467
           Q+
Sbjct: 282 QV 283



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 94  PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 149

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG             + ++G     ST  
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 196

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
           Q           +K        +    +  +  E              G+     +PC V
Sbjct: 197 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 256

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
               G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++     PTP
Sbjct: 257 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 125/259 (48%), Gaps = 33/259 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPCLEHAASGKDRP 272
           I  VAAG  HTL  S  G+++ WG    GQLG   + +K+   P  I  L      +D P
Sbjct: 156 IADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLL------RDAP 209

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                             +K++ACG  HS  +T  G + T+G+G +G+ GHGST D+  P
Sbjct: 210 ------------------IKQVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMP 251

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               +L+   +  I AG  ++  +S  G+V+V+G   F  LG G  + +  P +L+ P  
Sbjct: 252 KRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPT- 310

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI--PSLV--PIHGFLP 448
                + ++ G+ H+A ++  G + +WG   +G LG G      I  P+++  P      
Sbjct: 311 ---SIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLKSPNIILEPTVLDAPAQLQNS 367

Query: 449 RNIACGWWHTLLLAETTQI 467
           + +ACG  HTL++  T  +
Sbjct: 368 KQVACGSQHTLVVTGTGDV 386



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 125/267 (46%), Gaps = 35/267 (13%)

Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
           R   SSA    EN          +P +  L+ G   + +  G    + L+    +W WG 
Sbjct: 19  RWTMSSAFRHKENS------MLSAPLICRLHAG---SNLIHGREQKVTLAGARTLWSWGS 69

Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
              G+ G G        P +   ++      ++P+L  +             +K++ACGG
Sbjct: 70  ADHGRGGSGGHTD---AP-IFEVIQKEPEKVEKPVLPAK------------LIKKVACGG 113

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ----VEQIAAGLWHTV 354
            HS +VT++G LLT G    GQ G G+  +      AS   +++    +  +AAG WHT+
Sbjct: 114 AHSMIVTESGRLLTCGLNDNGQLGLGNLEN------ASEFEEVKGTESIADVAAGFWHTL 167

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
             S +G++Y +G N+ GQLG      +   +  E  +L     K V+CG+ HS  LT+DG
Sbjct: 168 AASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDG 227

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           +V +WG+  +G+LG G + D  +P  V
Sbjct: 228 EVYTWGFGAHGRLGHGSTEDEFMPKRV 254



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 181/434 (41%), Gaps = 103/434 (23%)

Query: 33  PEK--SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
           PEK   P+L   PA+L      K  CGG    ++  +ESG+L+T G  +D GQ  L  G 
Sbjct: 93  PEKVEKPVL---PAKLIK----KVACGGA--HSMIVTESGRLLTCG-LNDNGQ--LGLGN 140

Query: 91  HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
                E   +    S+   AAG+ H ++ ++ G++Y WG          +   G  G   
Sbjct: 141 LENASEFEEVKGTESIADVAAGFWHTLAASKKGKLYAWG----------SNKHGQLG--H 188

Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
            D+  K +  P E                                          + L  
Sbjct: 189 HDTAVKLAVEPQE------------------------------------------ILLLR 206

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
              I +VA G  H++ L+  G+V+ WG+G  G+LG GS          +P    A  G++
Sbjct: 207 DAPIKQVACGSYHSMALTKDGEVYTWGFGAHGRLGHGS-----TEDEFMPKRVEALVGEN 261

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                               +  I  G  +S+ V+ +G +  +G+G +   G G   DQL
Sbjct: 262 --------------------ISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQL 301

Query: 331 RPSYASSLMDI--QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--PKL 386
            P     ++D    + Q+A G +H   +S  G ++ +G    G LG G+     +  P +
Sbjct: 302 AP----VVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLKSPNIILEPTV 357

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHG 445
           L+ P  + + +K V+CG++H+ V+T  G V S+G    GQLGLG  +D   P  +P   G
Sbjct: 358 LDAPA-QLQNSKQVACGSQHTLVVTGTGDVFSFGLGGQGQLGLGSDLDHYEPKQIPRFVG 416

Query: 446 FLPRNIACGWWHTL 459
              R +ACG +H +
Sbjct: 417 KSLRQVACGLFHCI 430


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLVGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------VGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
          Length = 1378

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 96/175 (54%), Gaps = 26/175 (14%)

Query: 202  SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
            +P +V    GV + +++AG  H++ LS  G V+ WG    GQLGLG              
Sbjct: 937  TPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWGKNDFGQLGLG-------------- 982

Query: 262  LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
              H  S KD P L+R  +++S        V  +ACGG H+A++T  G + TFG G YGQ 
Sbjct: 983  --HTES-KDSPSLLR--ALDSQK------VDFLACGGSHTALLTQDGLVFTFGAGKYGQL 1031

Query: 322  GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGT 375
            GH ST D+LRP   + L+  +V QIA G WHT+  +S  G+V+ FG  + GQLG 
Sbjct: 1032 GHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLGN 1086



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 121/256 (47%), Gaps = 28/256 (10%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           +++  V+ G  H+L +   G+V+ WG G EGQLG+G   +   TP  I  L         
Sbjct: 97  LRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKAL--------- 147

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQL 330
                         AG   + +++CG  HS  +++ G + ++G   +GQ G G     Q 
Sbjct: 148 --------------AGIKII-QVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQT 192

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLET 389
            P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL  +G        K L  
Sbjct: 193 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSV 252

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
             L++     +SCG+ H+AVLT++G V ++G N  GQ  LG S ++  P  V     L  
Sbjct: 253 GALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQ--LGHSAEQRGPQCVERIDGLVS 310

Query: 450 NIACGWWHTLLLAETT 465
            I CG +HTL    TT
Sbjct: 311 QIDCGSYHTLAYVYTT 326



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 86/154 (55%), Gaps = 4/154 (2%)

Query: 308  GALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            G L  +G   +GQ G G        P     L  + + QI+AG  H++ +S+ G VY +G
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972

Query: 367  GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
             N FGQLG G  ++++ P LL    L+S++   ++CG  H+A+LT+DG V ++G  KYGQ
Sbjct: 973  KNDFGQLGLGHTESKDSPSLLRA--LDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030

Query: 427  LGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
            LG   + D   P LV  + G     IACG WHTL
Sbjct: 1031 LGHSSTRDELRPCLVTELLGNRVTQIACGRWHTL 1064



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 27/199 (13%)

Query: 231  GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            G+++ WG    GQLGLG      PTP ++   EH A     PL+                
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIV---EHLAG---VPLV---------------- 950

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
              +I+ G  HS  ++  G + ++G   +GQ G G T  +  PS   +L   +V+ +A G 
Sbjct: 951  --QISAGEAHSMALSMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGG 1008

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AV 409
             HT  ++ +G V+ FG  ++GQLG    + E  P L+    L   R   ++CG  H+ A 
Sbjct: 1009 SHTALLTQDGLVFTFGAGKYGQLGHSSTRDELRPCLVTE--LLGNRVTQIACGRWHTLAY 1066

Query: 410  LTEDGQVLSWGWNKYGQLG 428
            ++E G+V ++G  K GQLG
Sbjct: 1067 VSELGKVFAFGSGKNGQLG 1085



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 102/232 (43%), Gaps = 47/232 (20%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + +P  +    G+KI +V+ G  H+L LS+ GQV+ WG    GQLGLG  +    +P  +
Sbjct: 138 SFTPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRV 197

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY- 318
             LE        PL                   ++A GG HS  ++ +G   +FGWG   
Sbjct: 198 RSLEGI------PL------------------AQVAAGGAHSFALSLSGT--SFGWGSNS 231

Query: 319 -GQCGHGSTN---DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ     T     + +P    +L  + V  I+ G  HT  ++  G VY FG N  GQLG
Sbjct: 232 AGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLG 291

Query: 375 TGVDQ-----AENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
              +Q      E +  L+            + CG+ H+ A +   GQV+S+G
Sbjct: 292 HSAEQRGPQCVERIDGLVSQ----------IDCGSYHTLAYVYTTGQVVSFG 333



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 3/104 (2%)

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLET 389
           +P    +   ++V+ ++ G  H++ +  +GRV+ +G    GQLG G   +    P+ ++ 
Sbjct: 87  KPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKA 146

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
             L   +   VSCG  HS  L+EDGQV SWG N +GQLGLG  +
Sbjct: 147 --LAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEV 188



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 125/317 (39%), Gaps = 87/317 (27%)

Query: 54  DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAA 110
           D+   G   +LA    G++  WG A  EGQ  L  G+  E   TP+         +++ +
Sbjct: 100 DLVSCGKEHSLAVCHKGRVFAWG-AGSEGQ--LGIGEFKERSFTPQKIKALAGIKIIQVS 156

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
            G+ H ++++E G+V++WG              G  G       GK+  +P++ +P    
Sbjct: 157 CGYYHSLALSEDGQVFSWG----------KNSHGQLG------LGKE--VPSQTSP---- 194

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
                  +R ++      ++  A G   F LS                        LS  
Sbjct: 195 -------QRVRSLEGIPLAQVAAGGAHSFALS------------------------LS-- 221

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G  +GWG    GQL L                  A   + +PL V  G++ + G      
Sbjct: 222 GTSFGWGSNSAGQLALSG--------------TKAPVQRYKPLSV--GALKTLG------ 259

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  I+CG  H+AV+T  GA+ TFG    GQ GH +   + R       +D  V QI  G 
Sbjct: 260 VVYISCGSEHTAVLTQNGAVYTFGANSSGQLGHSA---EQRGPQCVERIDGLVSQIDCGS 316

Query: 351 WHTVC-ISVEGRVYVFG 366
           +HT+  +   G+V  FG
Sbjct: 317 YHTLAYVYTTGQVVSFG 333



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP--SLVPIHGFLPR 449
            E+ R  +VSCG  HS  +   G+V +WG    GQLG+G+  +R+     +  + G    
Sbjct: 94  FETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKALAGIKII 153

Query: 450 NIACGWWHTLLLAETTQI 467
            ++CG++H+L L+E  Q+
Sbjct: 154 QVSCGYYHSLALSEDGQV 171



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 51/200 (25%)

Query: 70   GKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
            G+L  WG  +  GQ  L  G+      TP+         +V+ +AG AH ++++  G VY
Sbjct: 913  GELFAWGQ-NSHGQ--LGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVY 969

Query: 127  TWGWRECVPSAKVTRDFGSAG---SFQKDST-----------------GKQSALPTEQAP 166
            +WG            DFG  G   +  KDS                  G  +AL T+   
Sbjct: 970  SWG----------KNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGL 1019

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL- 225
                 AG+    +   SS R+E            L PCLVT   G ++T++A G  HTL 
Sbjct: 1020 VFTFGAGK--YGQLGHSSTRDE------------LRPCLVTELLGNRVTQIACGRWHTLA 1065

Query: 226  ILSDMGQVWGWGYGGEGQLG 245
             +S++G+V+ +G G  GQLG
Sbjct: 1066 YVSELGKVFAFGSGKNGQLG 1085


>gi|159038147|ref|YP_001537400.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916982|gb|ABV98409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 555

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 160/404 (39%), Gaps = 54/404 (13%)

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
           S  ++ WG  +  GQ    +G   +TP P  LP   +V   AAG  H +++T  G V  W
Sbjct: 55  SDTVLAWGD-NLFGQLGDGTGADSDTPIPVSLPPGTTVTAIAAGDEHSLALTSTGTVLAW 113

Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR------KT 182
           G             FG  G    D T    + P   + P           R        T
Sbjct: 114 GRNR----------FGQLG----DETNTSRSTPVTVSLPPGTTVTAIAAGRSHSLAITST 159

Query: 183 SSA----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
            SA    R  S     G    +  P  V L PG  +T +AAG  H+L ++  G    WG 
Sbjct: 160 GSALAWGRNFSGQLGDGTTNDSNKPVAVNLPPGTTVTAIAAGDGHSLAVTSAGTALAWGR 219

Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
              GQLG G+           P     A G                    + V +IA G 
Sbjct: 220 NFAGQLGDGTTNDST-----TPVTVSVAPG--------------------TTVTDIAAGR 254

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            HS  +T AG  L +G    GQ G G+TND   P+  S         +AAG  H++ ++ 
Sbjct: 255 VHSLAITSAGTALGWGRNGSGQLGDGTTNDSTTPTTVSPPTGTVFTTVAAGEDHSLAVTS 314

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            G     G N +GQLG G + + N    +  P   S     ++ G  H+  +T  G  L+
Sbjct: 315 AGTALAAGDNLYGQLGDGTNTSSNTFVTVSLP--PSTTITAIAVGRFHNLGVTATGAALA 372

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           WG N  GQLG G + +RN P  V +   +   +A G+ H+L LA
Sbjct: 373 WGINIDGQLGDGTTTNRNTPQAVDLP--VSTTVAGGFGHSLALA 414


>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
          Length = 551

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  I+ G   ++ +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQ+ +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVVV 305



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 113/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  I+CG   S  V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VMNISCGQMCSMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG++Y +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP++  K    ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 100/172 (58%), Gaps = 3/172 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++A G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + +G V+ +G N  GQ+G+G    + +P+ + T  L++K    +SCG   S  + + G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVMNISCGQMCSMAVVDTGEV 226

Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  QI
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQI 278



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 122/256 (47%), Gaps = 41/256 (16%)

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
           V L   +KI  V  G  H LILS  G+ + + Y                       +EHA
Sbjct: 60  VKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYS----------------------IEHA 97

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                   ++++ S+            +IACG  HS  ++  G L  +G  L+GQ G G 
Sbjct: 98  RF----QCILQEKSI-----------IQIACGDYHSLALSKGGELFAWGQNLHGQLGVGR 142

Query: 326 TNDQL-RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
               +  P     L  + + QI+AG  H++ +S+ G VY +G N  GQLG G    E+ P
Sbjct: 143 LFASIPTPQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFP 202

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PI 443
            L+ET  L++++ + ++CG  H+A+LT DG V ++G  KYGQLG   + +   P LV  +
Sbjct: 203 SLIET--LDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTEL 260

Query: 444 HGFLPRNIACGWWHTL 459
            G     IACG  HTL
Sbjct: 261 AGNRVTQIACGRRHTL 276



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 122/256 (47%), Gaps = 33/256 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP----HL--IPCLEHAAS 267
           I ++A G  H+L LS  G+++ WG    GQLG+G     +PTP    HL  +P ++ +A 
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 167

Query: 268 GKDRPLLVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVVT 305
                 L   G+V     N  G+ G  +                 V+ +ACGG H+A++T
Sbjct: 168 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT 227

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYV 364
             G + TFG G YGQ GH ST ++LRP   + L   +V QIA G  HT+  +S  G+V+ 
Sbjct: 228 TDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFS 287

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           FG  + GQLG G    + +P  ++ P  E  + +  +       +   +  VL W   K 
Sbjct: 288 FGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGNQSVLLWMEKKN 347

Query: 425 GQLGLGDSIDRNIPSL 440
             + L     R IP+L
Sbjct: 348 PYVNL----RRKIPTL 359



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 115/286 (40%), Gaps = 90/286 (31%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVV 107
           K +    CG   +LA S+ G+L  WG  +  GQ  L  G+      TP+     +   +V
Sbjct: 106 KSIIQIACGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRLFASIPTPQAVEHLSGVPLV 162

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
           + +AG AH ++++ +G VY+WG            D G  G    D               
Sbjct: 163 QISAGKAHSMALSMSGNVYSWG----------RNDLGQLGLGHTD--------------- 197

Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
                                      G++F    P L+      ++  +A GG HT +L
Sbjct: 198 ---------------------------GEDF----PSLIETLDNQQVEFLACGGSHTALL 226

Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
           +  G V+ +G G  GQLG                  ++   + RP LV + + N      
Sbjct: 227 TTDGLVFTFGAGKYGQLG-----------------HNSTQNELRPRLVTELAGNR----- 264

Query: 288 RSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
              V +IACG RH+ A V+D G + +FG G  GQ G+G T++QL P
Sbjct: 265 ---VTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 307



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 12/134 (8%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-----VDQAENVPKLLE 388
           +   L +  + QIA G +H++ +S  G ++ +G N  GQLG G     +   + V  L  
Sbjct: 99  FQCILQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSG 158

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
            P+++      +S G  HS  L+  G V SWG N  GQLGLG +   + PSL+  +    
Sbjct: 159 VPLVQ------ISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQ 212

Query: 448 PRNIACGWWHTLLL 461
              +ACG  HT LL
Sbjct: 213 VEFLACGGSHTALL 226


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 30/255 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP--SLVPIHGFLPRN 450
            +++   +SCG  H+AVLT+ G V ++G    GQLG  DS++  +    ++ + G     
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-HDSVNDEVNPRRVLELMGSEVTQ 298

Query: 451 IACGWWHTLLLAETT 465
           IACG  HTL L  ++
Sbjct: 299 IACGRQHTLALVPSS 313



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 158/379 (41%), Gaps = 79/379 (20%)

Query: 25  WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
           WGY     PG S     I++ P   R     S K+V CGG     L   E G++ T G  
Sbjct: 4   WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           + +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG         
Sbjct: 61  NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
                GS G     +T    A+P        ++  ++ +   + S         A+  +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158

Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
           FT                   SP  V    G+ + +VAAGG H+  LS  G V+GWG   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
            GQLGL                      KDR  P  V+              V  I+CG 
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-IS 357
            H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  + 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP 311

Query: 358 VEGRVYVFGGNQFGQLGTG 376
             G +Y FG    GQLGTG
Sbjct: 312 SSGLIYAFGCGAKGQLGTG 330



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +KE+ACGG HS  + + G + T G    GQ GH    +  +P    +L D  +  +A G 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+++ +G    GQLG    + +  VP+L++   L  +    VSCG  H   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK--LNQQTILQVSCGNWHCLA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLG 430
           L  DGQ  +WG N +GQLGLG
Sbjct: 152 LAADGQFFTWGKNSHGQLGLG 172



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 31/278 (11%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG   +LA S+ G+L +WG+  D     +T+      P       + ++++ + G  HC
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +++   G+ +TWG +       + ++F S  S Q+        +P  Q       +    
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGAHSFALS 206

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           +           +      DE    SPC V L    K+  ++ G  HT +L+  G V+ +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G  GQLG  S    V                 R +L   G          S V +IAC
Sbjct: 267 GAGSCGQLGHDSVNDEV---------------NPRRVLELMG----------SEVTQIAC 301

Query: 297 GGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           G +H+ A+V  +G +  FG G  GQ G G T +   PS
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPS 339



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 8/162 (4%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G+   GQ G  S    +   P     + D  ++++A G  H+V +  +G VY  G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQL
Sbjct: 61  NTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL 116

Query: 428 GLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 117 GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|380029875|ref|XP_003698590.1| PREDICTED: uncharacterized protein LOC100869963 [Apis florea]
          Length = 1858

 Score =  110 bits (276), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 30/209 (14%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +++  V+ G  HTL +++ G V+ WG    GQLGLG +I    TP LI  L         
Sbjct: 871  IEVLSVSCGHCHTLAVTNNG-VYAWGSSQFGQLGLG-KILQCSTPELITSL--------- 919

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                            +  + +   G  HS  +T  G + T+GWG++GQ GHG+T+ ++ 
Sbjct: 920  ---------------AQEVIIDAVAGQYHSVALTSDGRVFTWGWGVHGQLGHGNTDKKMT 964

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+  +SL+ I +  I AG  HT+ +S EG +Y FG N FGQLG G +   +VP      +
Sbjct: 965  PTLVTSLLGIVIRFITAGHAHTLALSTEGIIYAFGCNIFGQLGVGNNIKSSVP----IKV 1020

Query: 392  LESKRAKVVSCGARHSAVLTEDGQVLSWG 420
              S+R  +++ G  H+  ++   ++  WG
Sbjct: 1021 SLSERIILIATGYFHNLAVSCTNKLYIWG 1049



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 37/256 (14%)

Query: 217  VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
            + AG  H  ++ + G V+ WG   +G LG G  +    +P +I               + 
Sbjct: 822  LCAGFSHVALIRN-GNVYTWGSSVQGCLGTGPSVLRYGSPQVISFF-----------WIM 869

Query: 277  QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRPSY 334
            +  V S           ++CG  H+  VT+ G    + WG   +GQ G G       P  
Sbjct: 870  EIEVLS-----------VSCGHCHTLAVTNNG---VYAWGSSQFGQLGLGKILQCSTPEL 915

Query: 335  ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
             +SL    +    AG +H+V ++ +GRV+ +G    GQLG G    +  P L+ +  L  
Sbjct: 916  ITSLAQEVIIDAVAGQYHSVALTSDGRVFTWGWGVHGQLGHGNTDKKMTPTLVTS--LLG 973

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---I 451
               + ++ G  H+  L+ +G + ++G N +GQLG+G+    NI S VPI   L      I
Sbjct: 974  IVIRFITAGHAHTLALSTEGIIYAFGCNIFGQLGVGN----NIKSSVPIKVSLSERIILI 1029

Query: 452  ACGWWHTLLLAETTQI 467
            A G++H L ++ T ++
Sbjct: 1030 ATGYFHNLAVSCTNKL 1045



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 11/188 (5%)

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR---PSYASS 337
           +++  +G  + +   C G     +   G + T+G  + G  G G +   LR   P   S 
Sbjct: 808 HNNSNSGADFKRRPLCAGFSHVALIRNGNVYTWGSSVQGCLGTGPS--VLRYGSPQVISF 865

Query: 338 --LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
             +M+I+V  ++ G  HT+ ++  G VY +G +QFGQLG G     + P+L+ +   E  
Sbjct: 866 FWIMEIEVLSVSCGHCHTLAVTNNG-VYAWGSSQFGQLGLGKILQCSTPELITSLAQEVI 924

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
              V   G  HS  LT DG+V +WGW  +GQLG G++  +  P+LV  + G + R I  G
Sbjct: 925 IDAVA--GQYHSVALTSDGRVFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGIVIRFITAG 982

Query: 455 WWHTLLLA 462
             HTL L+
Sbjct: 983 HAHTLALS 990



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 27/167 (16%)

Query: 202  SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
            +P L+T      I    AG  H++ L+  G+V+ WG+G  GQLG G+  K + TP L+  
Sbjct: 912  TPELITSLAQEVIIDAVAGQYHSVALTSDGRVFTWGWGVHGQLGHGNTDKKM-TPTLVTS 970

Query: 262  LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
            L               G V          ++ I  G  H+  ++  G +  FG  ++GQ 
Sbjct: 971  L--------------LGIV----------IRFITAGHAHTLALSTEGIIYAFGCNIFGQL 1006

Query: 322  GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            G G+      P   S  +  ++  IA G +H + +S   ++Y++G +
Sbjct: 1007 GVGNNIKSSVPIKVS--LSERIILIATGYFHNLAVSCTNKLYIWGAS 1051



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/200 (26%), Positives = 75/200 (37%), Gaps = 60/200 (30%)

Query: 54   DVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
            +V    CG    LA + +G +  WGS+   GQ  L       TPE      +  ++ A A
Sbjct: 872  EVLSVSCGHCHTLAVTNNG-VYAWGSSQ-FGQLGLGKILQCSTPELITSLAQEVIIDAVA 929

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G  H V++T  G V+TWGW             G  G     +T K+              
Sbjct: 930  GQYHSVALTSDGRVFTWGW-------------GVHGQLGHGNTDKK-------------- 962

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
                                         ++P LVT   G+ I  + AG  HTL LS  G
Sbjct: 963  -----------------------------MTPTLVTSLLGIVIRFITAGHAHTLALSTEG 993

Query: 232  QVWGWGYGGEGQLGLGSRIK 251
             ++ +G    GQLG+G+ IK
Sbjct: 994  IIYAFGCNIFGQLGVGNNIK 1013



 Score = 42.0 bits (97), Expect = 0.59,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 29/224 (12%)

Query: 58   GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
             G    LA S  G +  +G  +  GQ  L  G + ++  P  +     ++  A G+ H +
Sbjct: 981  AGHAHTLALSTEGIIYAFG-CNIFGQ--LGVGNNIKSSVPIKVSLSERIILIATGYFHNL 1037

Query: 118  SVTEAGEVYTWG-----WRECVPSAKVTR--------DFGSAGSFQK--DSTG----KQS 158
            +V+   ++Y WG      R    + K TR           +   F+K  DST      + 
Sbjct: 1038 AVSCTNKLYIWGASPQVLRLQAQTQKRTRILEQRDIKQLENIDEFEKVADSTNMNDTNEE 1097

Query: 159  ALPTE-QAPPSDKRAGEEVVKRRKT-SSAREESENPASGDEFFT-LSPCLV--TLNPGVK 213
             L  + Q   +  ++G     RRK   +    + N  S +E  T L P +V  +L  G  
Sbjct: 1098 VLENDAQNKNAQAKSGINTESRRKQLDNVCLRNVNVGSLEETQTHLKPTIVDTSLVKG-N 1156

Query: 214  ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
            I +++ G  H  +++  G ++ WG   +GQ+G GSR ++ +PTP
Sbjct: 1157 IIQISTGCHHNALVTKDGSLYTWGRNLDGQIGNGSRREVPIPTP 1200



 Score = 40.0 bits (92), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 3/60 (5%)

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P +++T +++    ++ S G  H+A++T+DG + +WG N  GQ+G G    R +P   P+
Sbjct: 1145 PTIVDTSLVKGNIIQI-STGCHHNALVTKDGSLYTWGRNLDGQIGNGSR--REVPIPTPL 1201


>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Nomascus leucogenys]
          Length = 556

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 86  GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 181 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 240

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 241 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 299 KSNQSYPTPVTV 310



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 204 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 239

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 240 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 299

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 300 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 103 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 162

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 221

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 222 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 281

Query: 466 QI 467
           Q+
Sbjct: 282 QV 283



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 128/331 (38%), Gaps = 91/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 94  PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 188

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             +  T   P          + RR T   + +                         +  
Sbjct: 189 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 214

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G    + + D G+V+ WGY G GQLGLG+     PT    PC   A  G      +R
Sbjct: 215 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PT----PCRVAALQG------IR 263

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +
Sbjct: 264 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT 309

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 310 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 30/255 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP--SLVPIHGFLPRN 450
            +++   +SCG  H+AVLT+ G V ++G    GQLG  DS++  +    ++ + G     
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-HDSVNDEVNPRRVLELMGSEVTQ 298

Query: 451 IACGWWHTLLLAETT 465
           IACG  HTL L  ++
Sbjct: 299 IACGRQHTLALVPSS 313



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 158/379 (41%), Gaps = 79/379 (20%)

Query: 25  WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
           WGY     PG S     I++ P   R     S K+V CGG     L   E G++ T G  
Sbjct: 4   WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           + +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG         
Sbjct: 61  NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
                GS G     +T    A+P        ++  ++ +   + S         A+  +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158

Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
           FT                   SP  V    G+ + +VAAGG H+  LS  G V+GWG   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
            GQLGL                      KDR  P  V+              V  I+CG 
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-IS 357
            H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  + 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP 311

Query: 358 VEGRVYVFGGNQFGQLGTG 376
             G +Y FG    GQLGTG
Sbjct: 312 SSGLIYAFGCGAKGQLGTG 330



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +KE+ACGG HS  + + G + T G    GQ GH    +  +P    +L D  +  +A G 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+++ +G    GQLG    + +  VP+L++   L  +    VSCG  H   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK--LNQQTILQVSCGNWHCLA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLG 430
           L  DGQ  +WG N +GQLGLG
Sbjct: 152 LAADGQFFTWGKNSHGQLGLG 172



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 31/278 (11%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG   +LA S+ G+L +WG+  D     +T+      P       + ++++ + G  HC
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +++   G+ +TWG +       + ++F S  S Q+        +P  Q       +    
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGAHSFALS 206

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           +           +      DE    SPC V L    K+  ++ G  HT +L+  G V+ +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G  GQLG  S    V                 R +L   G          S V +IAC
Sbjct: 267 GAGSCGQLGHDSVNDEV---------------NPRRVLELMG----------SEVTQIAC 301

Query: 297 GGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           G +H+ A+V  +G +  FG G  GQ G G T +   PS
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPS 339



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 8/162 (4%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G+   GQ G  S    +   P     + D  ++++A G  H+V +  +G VY  G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQL
Sbjct: 61  NTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL 116

Query: 428 GLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 117 GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|330837709|ref|YP_004412350.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
           17374]
 gi|329749612|gb|AEC02968.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
           DSM 17374]
          Length = 783

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 123/265 (46%), Gaps = 47/265 (17%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           VKI  V+AG  HT+IL + G +W  G    GQLG+G  I                  +  
Sbjct: 416 VKIKSVSAGDTHTMILKEDGTLWATGQNNYGQLGVGDTID-----------------RST 458

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P+ +  G            VKEIA G  H+ ++ + G L   G   YGQ G G+T     
Sbjct: 459 PVQIMTG------------VKEIAAGSTHTMILKEDGTLWATGRNTYGQLGVGAT----- 501

Query: 332 PSYASSLMDIQ--VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           P+  S+ + I   V++I+AG  HT+ +   G ++  G N +GQLG G     + P     
Sbjct: 502 PTQTSAPVQIMTGVKEISAGSTHTMILKENGTLWATGRNNYGQLGVGDTTNRSTP----V 557

Query: 390 PILESKR-------AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            + +S          K VS GA H+ +L E+G + + G N Y QL  G  ID+NIP  V 
Sbjct: 558 QVWDSANGSVFMTGVKAVSAGASHTMILKENGTLWATGRNFYYQLADGTKIDKNIPVQVI 617

Query: 443 IHGFLPRNIACGWWHTLLLAETTQI 467
             G     ++ G +HT++L +  ++
Sbjct: 618 SMGSDVEAVSAGTYHTMILKKNREL 642



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 35/257 (13%)

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-HLIPCLEH 264
           V +  GVK  ++AAG  HT+IL + G +W  G    GQLG+G+       P  ++  ++ 
Sbjct: 460 VQIMTGVK--EIAAGSTHTMILKEDGTLWATGRNTYGQLGVGATPTQTSAPVQIMTGVKE 517

Query: 265 AASGKDRPLLVRQGSV------NSSGKAG------RSY----------------VKEIAC 296
            ++G    +++++         N+ G+ G      RS                 VK ++ 
Sbjct: 518 ISAGSTHTMILKENGTLWATGRNNYGQLGVGDTTNRSTPVQVWDSANGSVFMTGVKAVSA 577

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G  H+ ++ + G L   G   Y Q   G+  D+  P    S M   VE ++AG +HT+ +
Sbjct: 578 GASHTMILKENGTLWATGRNFYYQLADGTKIDKNIPVQVIS-MGSDVEAVSAGTYHTMIL 636

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKV--VSCGARHSAVLTED 413
                ++  G NQ GQLG       + P ++  + IL      V  VS    H+ +L ++
Sbjct: 637 KKNRELWAVGNNQSGQLGDNTQTTRSSPVQVKASTILNDFMIDVEAVSIWDYHTIILKKN 696

Query: 414 GQVLSWGWNKYGQLGLG 430
           G + + G N  GQLG+G
Sbjct: 697 GTLWATGNNSSGQLGIG 713



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 43/265 (16%)

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH-------- 257
           V +  GVK  +++AG  HT+IL + G +W  G    GQLG+G       TP         
Sbjct: 509 VQIMTGVK--EISAGSTHTMILKENGTLWATGRNNYGQLGVGDTTNR-STPVQVWDSANG 565

Query: 258 --LIPCLEHAASGKDRPLLVRQ-GSVNSSGK---------------------AGRSYVKE 293
              +  ++  ++G    +++++ G++ ++G+                     +  S V+ 
Sbjct: 566 SVFMTGVKAVSAGASHTMILKENGTLWATGRNFYYQLADGTKIDKNIPVQVISMGSDVEA 625

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY--ASSLMD---IQVEQIAA 348
           ++ G  H+ ++     L   G    GQ G  +   +  P    AS++++   I VE ++ 
Sbjct: 626 VSAGTYHTMILKKNRELWAVGNNQSGQLGDNTQTTRSSPVQVKASTILNDFMIDVEAVSI 685

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETP--ILESKRAKVVSCGAR 405
             +HT+ +   G ++  G N  GQLG G   A+ ++P  ++    +        VS G  
Sbjct: 686 WDYHTIILKKNGTLWATGNNSSGQLGIGATPAQISIPMQVKGADGVGFMTDVASVSTGTS 745

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLG 430
           H+ ++  DG + + G N  GQLG G
Sbjct: 746 HTMIVGTDGTLWATGLNNKGQLGDG 770



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 8/106 (7%)

Query: 363 YVFGGNQFGQLGTGVDQA--ENVPKLLETPILESK---RAKVVSCGARHSAVLTEDGQVL 417
           Y FGG      G GV  A  + +  L +   L ++   + K VS G  H+ +L EDG + 
Sbjct: 379 YYFGGWDTTSNGNGVQYAIGDTLEILDQDVTLYARWLVKIKSVSAGDTHTMILKEDGTLW 438

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           + G N YGQLG+GD+IDR+ P  + + G   + IA G  HT++L E
Sbjct: 439 ATGQNNYGQLGVGDTIDRSTPVQI-MTGV--KEIAAGSTHTMILKE 481


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 30/255 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP--SLVPIHGFLPRN 450
            +++   +SCG  H+AVLT+ G V ++G    GQLG  DS++  +    ++ + G     
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-HDSVNDEVNPRRVLELMGSEVTQ 298

Query: 451 IACGWWHTLLLAETT 465
           IACG  HTL L  ++
Sbjct: 299 IACGRQHTLALVPSS 313



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 158/379 (41%), Gaps = 79/379 (20%)

Query: 25  WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
           WGY     PG S     I++ P   R     S K+V CGG     L   E G++ T G  
Sbjct: 4   WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           + +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG         
Sbjct: 61  NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
                GS G     +T    A+P        ++  ++ +   + S         A+  +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158

Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
           FT                   SP  V    G+ + +VAAGG H+  LS  G V+GWG   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
            GQLGL                      KDR  P  V+              V  I+CG 
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-IS 357
            H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  + 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP 311

Query: 358 VEGRVYVFGGNQFGQLGTG 376
             G +Y FG    GQLGTG
Sbjct: 312 SSGLIYAFGCGAKGQLGTG 330



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +KE+ACGG HS  + + G + T G    GQ GH    +  +P    +L D  +  +A G 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+++ +G    GQLG    + +  VP+L++   L  +    VSCG  H   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK--LNQQTILQVSCGNWHCLA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLG 430
           L  DGQ  +WG N +GQLGLG
Sbjct: 152 LAADGQFFTWGKNSHGQLGLG 172



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 31/278 (11%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG   +LA S+ G+L +WG+  D     +T+      P       + ++++ + G  HC
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +++   G+ +TWG +       + ++F S  S Q+        +P  Q       +    
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGAHSFALS 206

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           +           +      DE    SPC V L    K+  ++ G  HT +L+  G V+ +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G  GQLG  S    V                 R +L   G          S V +IAC
Sbjct: 267 GAGSCGQLGHDSVNDEV---------------NPRRVLELMG----------SEVTQIAC 301

Query: 297 GGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           G +H+ A+V  +G +  FG G  GQ G G T +   PS
Sbjct: 302 GRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPS 339



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 8/162 (4%)

Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G+   GQ G  S    +   P     + D  ++++A G  H+V +  +G VY  G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQL
Sbjct: 61  NTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL 116

Query: 428 GLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 117 GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         +I  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ ++  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V EIACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
           paniscus]
 gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
           [Gorilla gorilla gorilla]
 gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
          Length = 556

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 86  GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 181 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 240

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 241 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 299 KSNQSYPTPVTV 310



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 204 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 239

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 240 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 299

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 300 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 103 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 162

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 221

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 222 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 281

Query: 466 QI 467
           Q+
Sbjct: 282 QV 283



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 128/331 (38%), Gaps = 91/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 94  PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 188

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             +  T   P          + RR T   + +                         +  
Sbjct: 189 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 214

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G    + + D G+V+ WGY G GQLGLG+     PT    PC   A  G      +R
Sbjct: 215 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PT----PCRVAALQG------IR 263

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +
Sbjct: 264 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT 309

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 310 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGGRH+A+VT  G + ++G    G+ GHG  +D L P    +L +  +E +A G 
Sbjct: 312 VQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGE 371

Query: 351 WHTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G   +  G LG G   +  VPK +  P LE      +SCG  H+A
Sbjct: 372 YHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGP-LEGIHVSYISCGPWHTA 430

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           V+T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + E
Sbjct: 431 VVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVE 486



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 46/272 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  +A GGRH  +++  G+++ WG    G+LG G     V +  L P L  A S  + 
Sbjct: 310 LDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHG-----VDSDVLHPKLIEALSNTN- 363

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQ 329
                              ++ +ACG  H+  VT +G L T+G G Y  G  GHG+    
Sbjct: 364 -------------------IELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSH 404

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P   +  ++ I V  I+ G WHT  ++  G+++ FG   FG LG G  ++ ++P+ +E
Sbjct: 405 WVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVE 464

Query: 389 TPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLGDSIDRN 436
           +  L+  R    +CG  H+A + E             G++ +WG    G+LG GD   + 
Sbjct: 465 S--LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 522

Query: 437 IPSLVPIHGFLPR--NIACGWWHTLLLAETTQ 466
           +P+ V +    P    +ACG  H+L +A TT+
Sbjct: 523 VPTRVALVNVKPNFCQVACG--HSLTVALTTK 552



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 128/260 (49%), Gaps = 45/260 (17%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R K V  P  +  L+       
Sbjct: 416 GIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR-KSVSLPREVESLK------- 467

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G L T+G G  
Sbjct: 468 ----------------GLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 510

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVE--QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G+ GHG    +L P+  + L++++    Q+A G   TV ++ +G VY  G   +GQLG  
Sbjct: 511 GRLGHGDKEAKLVPTRVA-LVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLG-- 567

Query: 377 VDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           + QA+  +P  +E  + ES   + ++CGA H AVLT   +V +WG    G+LG GD+ DR
Sbjct: 568 IPQADGKLPICVEWKLSES-FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 626

Query: 436 NIPSLV-PIHGFLPRNIACG 454
           N P+LV  +     ++IACG
Sbjct: 627 NTPTLVEALKDKDVKSIACG 646



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 6/148 (4%)

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G   D L P    S + + V+ IA G  H   ++ +G ++ +G    G+LG GVD     
Sbjct: 293 GVKMDSLFPKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLH 352

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPSLV 441
           PKL+E   L +   ++V+CG  H+  +T  G + +WG   Y  G LG G+ +   +P  V
Sbjct: 353 PKLIEA--LSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRV 410

Query: 442 --PIHGFLPRNIACGWWHTLLLAETTQI 467
             P+ G     I+CG WHT ++    Q+
Sbjct: 411 NGPLEGIHVSYISCGPWHTAVVTSAGQL 438



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 28/181 (15%)

Query: 231 GQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
           G+++ WG G +G+LG G +  K+VPT                    R   VN      + 
Sbjct: 500 GKLFTWGDGDKGRLGHGDKEAKLVPT--------------------RVALVNV-----KP 534

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
              ++ACG   +  +T  G + T G  +YGQ G    + +L       L +  VE+IA G
Sbjct: 535 NFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWKLSESFVEEIACG 594

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            +H   ++    VY +G    G+LG G     N P L+E   L+ K  K ++CG   +A 
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEA--LKDKDVKSIACGTNFTAA 652

Query: 410 L 410
           +
Sbjct: 653 I 653


>gi|357463175|ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 535

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 32/260 (12%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYG--GEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           G++I + AAG   T++++D GQV+ +G    GE + G G   K V  P L+  L++    
Sbjct: 197 GIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYG-GQGSKTVIAPRLVESLKNI--- 252

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                +V + A G   +AV++  G + TF WG  G+ GH + ++
Sbjct: 253 ---------------------FVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSN 291

Query: 329 QLRPS-YASSLMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGTGVDQAENVP 384
            + P     +L DI V QIAAG  + +C++ +     VY  G    G+LG G    E  P
Sbjct: 292 DMEPHPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFP 351

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PI 443
           +L+E     + +  V+S GA H+AV+  DG+V +WGW +YG LG G+      P +V  +
Sbjct: 352 RLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDAL 411

Query: 444 HGFLPRNIACGWWHTLLLAE 463
                 ++A G + T ++AE
Sbjct: 412 TNVKAVHVATGDYTTFVVAE 431



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 162/381 (42%), Gaps = 86/381 (22%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHC 116
           G G ++A +  G + ++GS +  GQ  L  G   E   P P+ T     +++AAAG    
Sbjct: 154 GPGHSIAVTSKGDVYSFGS-NSSGQ--LGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRT 210

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           + +T++G+VY +G                     KDS G                     
Sbjct: 211 MLITDSGQVYAFG---------------------KDSFG--------------------- 228

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
                      E+E    G +   ++P LV     + + + A G   T +LS  G+V+ +
Sbjct: 229 -----------EAEYGGQGSKT-VIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 276

Query: 237 GYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
            +G +G+LG  +    M P P L+  LE      D P++           AG  Y+  +A
Sbjct: 277 SWGSDGKLGHHTDSNDMEPHP-LLGALE------DIPVV--------QIAAGYCYLLCLA 321

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL--MDIQVEQIAAGLWHT 353
           C     +V        + G GL G+ GHG+  D+  P        +++Q   I+AG WH 
Sbjct: 322 CQPSGMSV-------YSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHA 374

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
             +  +GRV  +G  ++G LG G ++ E  PK+++   L + +A  V+ G   + V+ ED
Sbjct: 375 AVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDA--LTNVKAVHVATGDYTTFVVAED 432

Query: 414 GQVLSWGWNKYGQLGLGDSID 434
           G V S+G  +   LG    ID
Sbjct: 433 GDVYSFGCGESASLGHNAVID 453



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 10/169 (5%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT  G + +FG    GQ GHG+T ++ RP    +L  I++ Q AAG   T+ I+  
Sbjct: 157 HSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDS 216

Query: 360 GRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           G+VY FG + FG+   G   ++ V  P+L+E+  L++      + G   +AVL+ +G+V 
Sbjct: 217 GQVYAFGKDSFGEAEYGGQGSKTVIAPRLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 274

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLLA 462
           ++ W   G+  LG   D N     P+ G L       IA G+ + L LA
Sbjct: 275 TFSWGSDGK--LGHHTDSNDMEPHPLLGALEDIPVVQIAAGYCYLLCLA 321



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ ++ +G VY FG N  GQLG G  + E  PK + T  L+  R    + GA
Sbjct: 150 QAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRT--LQGIRIIQAAAGA 207

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI--PSLV-PIHGFLPRNIACGWWHTLLL 461
             + ++T+ GQV ++G + +G+   G    + +  P LV  +        A G + T +L
Sbjct: 208 GRTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVL 267

Query: 462 AETTQI 467
           +   ++
Sbjct: 268 SREGRV 273


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 96/171 (56%), Gaps = 4/171 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAG 349
           + +I CG  HS  ++  G L  +G  L+GQ G G   D    P     L  + + QI+AG
Sbjct: 38  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAG 97

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
             H++ +SV G +Y +G N FGQLG G    ++ P L+E   LE+++ + ++CG  H+A+
Sbjct: 98  KSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEA--LENQKVEFLACGGSHTAL 155

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
           LT+DG V ++G  KYGQLG   + +   P LV  + G     +ACG  HTL
Sbjct: 156 LTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTL 206



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 34/220 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G ++ WG    GQLGLG            
Sbjct: 77  TTAPQIVEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGH----------- 125

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
                    KD P L+               V+ +ACGG H+A++T  G + TFG G YG
Sbjct: 126 ------TDDKDFPSLIE--------ALENQKVEFLACGGSHTALLTKDGLVFTFGAGKYG 171

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L   +V Q+A G  HT+  +S  G+V+ FG  + GQLG G  
Sbjct: 172 QLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNGGT 231

Query: 379 QAENVPKLLETPILE--------SKRAKVVSCGARHSAVL 410
             + +P  ++ P  E        S++  ++  G   S +L
Sbjct: 232 HNQLIPLPMKLPSNEELKFENRTSEKELIIIAGGNQSILL 271



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 4/132 (3%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPIL 392
           +   L +  + QI  G +H++ +S  G ++ +G N  GQLG G +  +   P+++E   L
Sbjct: 29  FQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEH--L 86

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI 451
                  +S G  HS  L+  G + SWG N +GQLGLG + D++ PSL+  +       +
Sbjct: 87  SGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFL 146

Query: 452 ACGWWHTLLLAE 463
           ACG  HT LL +
Sbjct: 147 ACGGSHTALLTK 158



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVP-IHGFLP 448
           IL+ K    ++CG  HS  L++ G++ +WG N +GQLG+G   D    P +V  + G   
Sbjct: 32  ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPL 91

Query: 449 RNIACGWWHTLLLAETTQI 467
             I+ G  H++ L+ +  I
Sbjct: 92  AQISAGKSHSMALSVSGNI 110


>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 683

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 144/294 (48%), Gaps = 43/294 (14%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
           C+  L P  K+   A G  HTL+ ++ G+V+  G   EGQLGLG   +   T HLI    
Sbjct: 80  CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGD-TEERSTFHLISFFT 137

Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
                 + +A       L   G +     NS G+ G   V                 I+C
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISC 197

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL----MDIQVEQIAAGLWH 352
           G  HSA VT  G L TFG     +CG     +QL  ++        +  +V Q+A G  H
Sbjct: 198 GYYHSAFVTTEGQLYTFGEP---ECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGH 254

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLT 411
           TV ++ E  VY FG  QFGQLG G    E +VPK +E   ++ ++   ++CG  H+A++T
Sbjct: 255 TVVLT-EKAVYTFGLGQFGQLGLGTFLFETSVPKAIEH--IKDQKISFIACGENHTALIT 311

Query: 412 EDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           + G + ++G  ++G+LGLG  +S ++ IP+L      F+ + ++CG  HTL+ A
Sbjct: 312 DMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 2/174 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+AVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G+VY  GGN  GQLG G D  E     L +     ++ K +S G+  SA LTED
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           G++  WG N  GQ+GL +  +  +P  V + G     I+CG++H+  +    Q+
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTV-GKPISWISCGYYHSAFVTTEGQL 211


>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
 gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
 gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Nomascus leucogenys]
 gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
           paniscus]
 gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
           [Gorilla gorilla gorilla]
 gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; Short=CHC1-L;
           AltName: Full=RCC1-like G exchanging factor; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
 gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Homo sapiens]
 gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
 gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
 gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Homo sapiens]
 gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVTV 305



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 217 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 128/331 (38%), Gaps = 91/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 89  PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 183

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             +  T   P          + RR T   + +                         +  
Sbjct: 184 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 209

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G    + + D G+V+ WGY G GQLGLG+     PTP  +  L+           +R
Sbjct: 210 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PTPCRVAALQG----------IR 258

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +
Sbjct: 259 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT 304

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 555

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVTV 305



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 217 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 128/331 (38%), Gaps = 91/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 89  PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 183

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             +  T   P          + RR T   + +                         +  
Sbjct: 184 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 209

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G    + + D G+V+ WGY G GQLGLG+     PT    PC   A  G      +R
Sbjct: 210 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PT----PCRVAALQG------IR 258

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +
Sbjct: 259 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT 304

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 57  GDVRSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 151

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 152 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 211

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 212 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 269

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 270 KSNQSYPTPVTV 281



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 175 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 211 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 271 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 192

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 193 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 252

Query: 466 QI 467
           Q+
Sbjct: 253 QV 254



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 128/331 (38%), Gaps = 91/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 65  PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 120

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 159

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             +  T   P          + RR T   + +                         +  
Sbjct: 160 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 185

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G    + + D G+V+ WGY G GQLGLG+     PTP  +  L+           +R
Sbjct: 186 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PTPCRVAALQG----------IR 234

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +
Sbjct: 235 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT 280

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 281 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258


>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVTV 305



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 217 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 128/331 (38%), Gaps = 91/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 89  PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 183

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             +  T   P          + RR T   + +                         +  
Sbjct: 184 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 209

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G    + + D G+V+ WGY G GQLGLG+     PTP  +  L+           +R
Sbjct: 210 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PTPCRVAALQG----------IR 258

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +
Sbjct: 259 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT 304

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 110/211 (52%), Gaps = 29/211 (13%)

Query: 214  ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
            +T V + G H+L L++ G+V+ WG G  G+LG G+  +                 + R +
Sbjct: 1079 VTSVGSDG-HSLALTESGEVFSWGDGDYGKLGHGNSDR---------------QRRPRQI 1122

Query: 274  LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
               QG            V +IACG +HSAVVT  G LLTFG G YG+ G G+  ++  P 
Sbjct: 1123 EALQGE----------EVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPE 1172

Query: 334  YASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               +L +  +  +A GL HTVC+S +G   + FG   +G+LG G   A++ P  +E   L
Sbjct: 1173 RVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEA--L 1230

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
               + K V+CG + S  LT DG VL+WG ++
Sbjct: 1231 SGLKVKKVACGTQFSVALTRDGFVLTWGQDR 1261



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 6/178 (3%)

Query: 289  SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
            S  ++I CG   + V+   G +L  G G YG+ G G+++D    +  S+L    V Q+  
Sbjct: 1021 SSAQQIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVT 1080

Query: 349  GL---WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
             +    H++ ++  G V+ +G   +G+LG G    +  P+ +E   L+ +    ++CG +
Sbjct: 1081 SVGSDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVIQIACGFK 1138

Query: 406  HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
            HSAV+T DG++L++G   YG+LGLG   +R  P  V  +  +   ++ACG  HT+ ++
Sbjct: 1139 HSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNHTVCVS 1196



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 89/157 (56%), Gaps = 4/157 (2%)

Query: 300  HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            HS  +T++G + ++G G YG+ GHG+++ Q RP    +L   +V QIA G  H+  ++V+
Sbjct: 1087 HSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVD 1146

Query: 360  GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL-S 418
            G++  FG   +G+LG G       P+ ++   LE+     V+CG  H+  ++ DG    +
Sbjct: 1147 GKLLTFGNGDYGRLGLGTVCNRKTPERVKA--LENYHIGHVACGLNHTVCVSADGSTTWA 1204

Query: 419  WGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            +G   YG+LGLG++  ++ P  +  + G   + +ACG
Sbjct: 1205 FGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACG 1241



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 84/216 (38%), Gaps = 44/216 (20%)

Query: 53   KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
            ++V    CGF  +   +  GKL+T+G+ D  G+  L +  + +TPE         +   A
Sbjct: 1128 EEVIQIACGFKHSAVVTVDGKLLTFGNGD-YGRLGLGTVCNRKTPERVKALENYHIGHVA 1186

Query: 111  AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
             G  H V V+  G   TW              FG  G + K   G  SA  T       K
Sbjct: 1187 CGLNHTVCVSADGST-TWA-------------FGD-GDYGKLGLGNTSAKSTPV-----K 1226

Query: 171  RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------------PCLVTLNPG 211
                  +K +K +   + S   A   + F L+                   P  VT   G
Sbjct: 1227 IEALSGLKVKKVACGTQFS--VALTRDGFVLTWGQDRLIGQTEAQMRGHCTPQKVTTLAG 1284

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
              I +V  G  HTL L+  G VWGWG   +GQLGLG
Sbjct: 1285 HFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLG 1320


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLVGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 169/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------VGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|405976795|gb|EKC41279.1| Regulator of chromosome condensation [Crassostrea gigas]
          Length = 443

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 161/388 (41%), Gaps = 62/388 (15%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           +  +V A AG  H V +T  GEVYT+G   C     + R+    GS           LP+
Sbjct: 91  DQKIVSAVAGGMHTVCLTNKGEVYTFG---CNDEGALGRNTSEEGS---------ETLPS 138

Query: 163 E--------QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
           +        Q    D        + +  +       N   G     +    + + PG  +
Sbjct: 139 KVDLLGRGIQLSAGDSHTAVLTDEGKVFAWGNFRDANGKIGLTSDGIQEKPIEMLPGETV 198

Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL--------GSR--IKMVPTPHLIPCLEH 264
            K+A+GG H L L++ G+++  G   +GQLG         G R  +  +  P +I CL H
Sbjct: 199 IKIASGGDHLLCLTEKGEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRH 258

Query: 265 AASGKDRPLLVRQGSVNSSGKAGR--SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
            +         ++  V     AG+  SY +E            D G++  +G   Y Q G
Sbjct: 259 KS---------KKRVVFDDVYAGQYMSYARE-----------KDTGSIYAWGLNNYYQLG 298

Query: 323 HGSTNDQLRPSYASSLM-DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQA 380
                ++  P Y  ++  D++V  + AG  H +C+   G+VY  G  ++G+LG G  ++ 
Sbjct: 299 TNDLENKFVPVYVKAMSEDVKVTMVDAGQHHAICLDTAGKVYTVGRGEYGRLGHGDSNEE 358

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           + VP +L+ P       K V+ G   S  +T  G++ +WG     QLG GD  D   P L
Sbjct: 359 KRVPAILDLP-----PCKQVAAGQAVSYAVTNSGEIYAWGMGTSQQLGSGDDEDVTTPQL 413

Query: 441 VPIHGFLPRNIAC---GWWHTLLLAETT 465
           +       R +     G  HT+LLA  T
Sbjct: 414 ITGKQLQTRKVIAVSGGGQHTVLLATDT 441



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 9/168 (5%)

Query: 304 VTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           VT  G +L  G G  GQ G G    ++ RP+  + + D ++    AG  HTVC++ +G V
Sbjct: 55  VTVTGVVLACGEGDVGQLGLGPDVMEKSRPALVN-IDDQKIVSAVAGGMHTVCLTNKGEV 113

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG-- 420
           Y FG N  G LG   + +E   + L + +    R   +S G  H+AVLT++G+V +WG  
Sbjct: 114 YTFGCNDEGALGR--NTSEEGSETLPSKVDLLGRGIQLSAGDSHTAVLTDEGKVFAWGNF 171

Query: 421 WNKYGQLGL-GDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
            +  G++GL  D I      ++P  G     IA G  H L L E  +I
Sbjct: 172 RDANGKIGLTSDGIQEKPIEMLP--GETVIKIASGGDHLLCLTEKGEI 217



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 47/286 (16%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT-PHLIPC 261
           P LV ++   KI    AGG HT+ L++ G+V+ +G   EG LG  +  +   T P  +  
Sbjct: 84  PALVNIDDQ-KIVSAVAGGMHTVCLTNKGEVYTFGCNDEGALGRNTSEEGSETLPSKVDL 142

Query: 262 L----EHAASGKDRPLLVRQGSV-------NSSGKAGRS---------------YVKEIA 295
           L    + +A      +L  +G V       +++GK G +                V +IA
Sbjct: 143 LGRGIQLSAGDSHTAVLTDEGKVFAWGNFRDANGKIGLTSDGIQEKPIEMLPGETVIKIA 202

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGS-----------TNDQLRPSYASSLMD---- 340
            GG H   +T+ G + + G    GQ G  +            +  L+P+    L      
Sbjct: 203 SGGDHLLCLTEKGEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKK 262

Query: 341 -IQVEQIAAGLWHTVCISVE-GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
            +  + + AG + +     + G +Y +G N + QLGT   + + VP  ++  + E  +  
Sbjct: 263 RVVFDDVYAGQYMSYAREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKA-MSEDVKVT 321

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLVPI 443
           +V  G  H+  L   G+V + G  +YG+LG GDS  ++ +P+++ +
Sbjct: 322 MVDAGQHHAICLDTAGKVYTVGRGEYGRLGHGDSNEEKRVPAILDL 367



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 126/313 (40%), Gaps = 52/313 (16%)

Query: 67  SESGKLITWGSADD-EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
           ++ GK+  WG+  D  G+  LTS    E P    LP E +V+K A+G  H + +TE GE+
Sbjct: 160 TDEGKVFAWGNFRDANGKIGLTSDGIQEKPIEM-LPGE-TVIKIASGGDHLLCLTEKGEI 217

Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQK-DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
           Y+ G  E     +V   F   G  +  D   K + +   +     +   ++V   +  S 
Sbjct: 218 YSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKKRVVFDDVYAGQYMSY 277

Query: 185 AREESENPASG---DEFFTLS---------PCLV-TLNPGVKITKVAAGGRHTLILSDMG 231
           ARE+          + ++ L          P  V  ++  VK+T V AG  H + L   G
Sbjct: 278 AREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKAMSEDVKVTMVDAGQHHAICLDTAG 337

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLI---PCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
           +V+  G G  G+LG G   +    P ++   PC                           
Sbjct: 338 KVYTVGRGEYGRLGHGDSNEEKRVPAILDLPPC--------------------------- 370

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS--SLMDIQVEQI 346
              K++A G   S  VT++G +  +G G   Q G G   D   P   +   L   +V  +
Sbjct: 371 ---KQVAAGQAVSYAVTNSGEIYAWGMGTSQQLGSGDDEDVTTPQLITGKQLQTRKVIAV 427

Query: 347 AAGLWHTVCISVE 359
           + G  HTV ++ +
Sbjct: 428 SGGGQHTVLLATD 440



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 104/256 (40%), Gaps = 48/256 (18%)

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLI-----PCLEHAASGKDRPLLVRQGSV----- 280
           G V   G G  GQLGLG  +     P L+       +   A G     L  +G V     
Sbjct: 59  GVVLACGEGDVGQLGLGPDVMEKSRPALVNIDDQKIVSAVAGGMHTVCLTNKGEVYTFGC 118

Query: 281 NSSGKAGRSYVKE-----------------IACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
           N  G  GR+  +E                 ++ G  H+AV+TD G +  F WG +     
Sbjct: 119 NDEGALGRNTSEEGSETLPSKVDLLGRGIQLSAGDSHTAVLTDEGKV--FAWGNFRDANG 176

Query: 324 --GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG------- 374
             G T+D ++      L    V +IA+G  H +C++ +G +Y  G  + GQLG       
Sbjct: 177 KIGLTSDGIQEKPIEMLPGETVIKIASGGDHLLCLTEKGEIYSCGCAEQGQLGRVAECFS 236

Query: 375 -----TGVDQAENVPKLLETPILESKRAKV---VSCGARHSAVLTED-GQVLSWGWNKYG 425
                 G+D     P ++     +SK+  V   V  G   S    +D G + +WG N Y 
Sbjct: 237 VRGGRKGLDYILK-PAIIRCLRHKSKKRVVFDDVYAGQYMSYAREKDTGSIYAWGLNNYY 295

Query: 426 QLGLGDSIDRNIPSLV 441
           QLG  D  ++ +P  V
Sbjct: 296 QLGTNDLENKFVPVYV 311


>gi|159037340|ref|YP_001536593.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916175|gb|ABV97602.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 563

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 164/429 (38%), Gaps = 84/429 (19%)

Query: 40  SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           +P+   L    +   +  G  G +LA + +  ++ WG  +  GQ    +  +  TP    
Sbjct: 83  TPVTVDLPADTTITAIAAGVNGHSLAVTSASTMLAWG-FNTWGQLGDGTTTNRNTPVAVD 141

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           LPT  ++   AAG +H ++VT AG +  WG               SAG            
Sbjct: 142 LPTGTTITAIAAGKSHSLAVTSAGTMLAWG-------------LNSAGQL---------- 178

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
                        G+     R T                    P  V L  G  IT +AA
Sbjct: 179 -------------GDGTTTNRNT--------------------PVAVDLPTGTTITAIAA 205

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G  H+L L+  G +  WG    GQLG G+                    ++ P+ V   +
Sbjct: 206 GNGHSLALTSAGTMLAWGENTWGQLGDGTTTN-----------------RNTPVTVDLPT 248

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS-SL 338
                    + +  +A GG HS  VT  G +L +G+  +GQ G G+T ++  P       
Sbjct: 249 --------GTTITALAGGGGHSLAVTSTGTMLAWGFNFWGQLGDGTTTNRNTPVAVDLPT 300

Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
                     G  H++  +  G +  +G N FGQLG G     + P  ++ P   +  A 
Sbjct: 301 GTTITAIAGGGGGHSLAATSTGTMLAWGLNSFGQLGDGTTSNRSTPVTVDLPAGTTITAI 360

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWH 457
               G+ HS   T  G +L+WG N  GQLG G + +R+ P  V +  G     +  G +H
Sbjct: 361 AAGGGSGHSLAATSTGTMLAWGANTLGQLGDGTTSNRSTPVTVDLPAGTTITAVTAGGFH 420

Query: 458 TLLLAETTQ 466
           +L +  +T 
Sbjct: 421 SLAIVPSTS 429



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 4/165 (2%)

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL-WHTVCISVE 359
           SA     G  L +G+   GQ G G+T ++  P       D  +  IAAG+  H++ ++  
Sbjct: 53  SAAAGTPGTGLAWGFNALGQLGDGTTTNRNTPVTVDLPADTTITAIAAGVNGHSLAVTSA 112

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
             +  +G N +GQLG G     N P  ++ P   +  A  ++ G  HS  +T  G +L+W
Sbjct: 113 STMLAWGFNTWGQLGDGTTTNRNTPVAVDLPTGTTITA--IAAGKSHSLAVTSAGTMLAW 170

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAE 463
           G N  GQLG G + +RN P  V +  G     IA G  H+L L  
Sbjct: 171 GLNSAGQLGDGTTTNRNTPVAVDLPTGTTITAIAAGNGHSLALTS 215


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 115/248 (46%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT++G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 157/377 (41%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLTTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T  G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 117/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L + 
Sbjct: 243 KVVYISCGEEHTAVLTKN 260



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +   G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
 gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
          Length = 1164

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 127/264 (48%), Gaps = 31/264 (11%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHL-IPCLEHAASGKDRPLLVR-Q 277
           G HT+ +   G VWGWGY G GQLG G S    VP   + +  ++  A G++  + +R  
Sbjct: 638 GNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMIAGGENHTVALRSD 697

Query: 278 GSVNSSGKAGRSYVKE--------------------IACGGRHSAVVTDAGALLTFGWGL 317
           G++++ G  G   + +                    ++ G  HS  +   G +  FG+  
Sbjct: 698 GTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNG 757

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           YGQ G G+T+ Q  P     L    V  IAAG   ++ +  +G V+ +G N +G+LG G 
Sbjct: 758 YGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGT 815

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
               +VP  ++  +L   +A  ++ G  H   L +DG V +WG+N  G+LG   +I ++ 
Sbjct: 816 TTRSSVP--VQVALLTDVKA--IAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQST 871

Query: 438 PSLVPIHGFLPRNIACGWWHTLLL 461
           P    + G   + IA G +HTL L
Sbjct: 872 PVQSGVTGI--KGIAAGPYHTLAL 893



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 130/271 (47%), Gaps = 32/271 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+  T     V ++     T V+AG  H+L L   G VW +GY G GQLG G+      
Sbjct: 712 GDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQ-R 770

Query: 255 TPHLIPCLE---HAASGKDRPLLVR-QGSV-----NSSGKAGR---------------SY 290
           TP  +  L      A+GKD  L ++  G+V     N+ G+ G                + 
Sbjct: 771 TPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTD 830

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           VK IA G  H   +   G++  +G+   G+ G+ ST  Q  P   S +  I+   IAAG 
Sbjct: 831 VKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQSTP-VQSGVTGIK--GIAAGP 887

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           +HT+ +  +G V+ +G N +GQLG G + + +VP  +  P L S  +  ++ G   S   
Sbjct: 888 YHTLALKSDGTVWSWGYNGYGQLGNGNNTSRSVPAAI--PGLASIAS--IAAGENQSIAY 943

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
             DG + SWG N  GQLG G ++D N+P  V
Sbjct: 944 GNDGILYSWGRNANGQLGNGTTVDTNVPHKV 974



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 123/330 (37%), Gaps = 53/330 (16%)

Query: 10  ENEKMEECKETVVYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
           EN  +    +  ++ WGY   G   + S      P ++    +W  V  G    +LA   
Sbjct: 688 ENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAG-ENHSLALKS 746

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
            G +  +G     G   L  G       P  +     VV  AAG    +++   G V++W
Sbjct: 747 DGTVWAFGY---NGYGQLGDGTTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSW 803

Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR---AGEE---VVKRRKT 182
           G             +G  G    + T  +S++P + A  +D +   AG+     +K+  +
Sbjct: 804 GQNT----------YGELG----NGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGS 849

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
             A   + N   G+   T+S      +    I  +AAG  HTL L   G VW WGY G G
Sbjct: 850 VFAWGYNGNGELGNS-STISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYG 908

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           QLG G+       P  IP L   AS                          IA G   S 
Sbjct: 909 QLGNGNNTSR-SVPAAIPGLASIAS--------------------------IAAGENQSI 941

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
              + G L ++G    GQ G+G+T D   P
Sbjct: 942 AYGNDGILYSWGRNANGQLGNGTTVDTNVP 971


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         +I  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ ++  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V EIACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 122/251 (48%), Gaps = 28/251 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   TL P  +      KI  ++ G G H ++ +  G+V+ WG+   GQLG G+    +
Sbjct: 81  GDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTINHGL 140

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
              H+                    S N S K     V E+ACG  HS V+T  G +  +
Sbjct: 141 VPSHI--------------------STNLSNKQ----VTEVACGSYHSLVLTSDGEVFAW 176

Query: 314 GWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  GQ
Sbjct: 177 GYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQ 236

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+ 
Sbjct: 237 LGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 433 IDRNIPSLVPI 443
            +++ P+ V +
Sbjct: 295 SNQSYPTPVVV 305



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 106/182 (58%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + ++G   YGQ G+G+ N  L PS+ S+ L + QV ++
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRV-TGCLQNKVVVNIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
           S  + + G+V  WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 111/224 (49%), Gaps = 32/224 (14%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L P  ++ N   K +T+VA G  H+L+L+  G+V+ WGY   GQ+G GS         + 
Sbjct: 140 LVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVT 199

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            CL++                          V  IACG   S  V D G +  +G+   G
Sbjct: 200 GCLQNKV------------------------VVNIACGQMCSMAVVDTGEVYVWGYNGNG 235

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           Q G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG   
Sbjct: 236 QLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295

Query: 380 AENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
            ++ P    TP++  K    ++ +C + H SA  T+ G V  WG
Sbjct: 296 NQSYP----TPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 45.1 bits (105), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S     IP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
          Length = 1344

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 128/270 (47%), Gaps = 40/270 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           IT+VA G  H L +++  +++ WG G  G LG G+R  +    HLI         KD   
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLI------IEKKDYTY 344

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                           +++ IACG  HS  +T    +LT+G G  G+ GHG  +D L P 
Sbjct: 345 ----------------FIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPK 388

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
               L   +   I+AG  H+  IS +  +Y +G   +G+LG G+D +E  PKL+E   L+
Sbjct: 389 EIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIED--LD 446

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI---PSLVPIH--GFLP 448
                 VSCGA H+  +T  G V ++G  KYG+LG+       +   P  +  +  G  P
Sbjct: 447 QYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEP 506

Query: 449 RNI-----------ACGWWHTLLLAETTQI 467
           + +           A G+ H+L LA++ +I
Sbjct: 507 QEMLVQDKNEAILAAAGYNHSLCLAKSGKI 536



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 152/381 (39%), Gaps = 88/381 (23%)

Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           V++ A G  + VS+T  GEVY +G          +  +G     +  +T +         
Sbjct: 594 VIQVACGVLNTVSLTNGGEVYVFG----------SNAYGQLAKDKDQTTFR--------- 634

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG---VKITKVAAGGR 222
               K   ++       S A + SE  +           L+   PG   V+I  +A GG 
Sbjct: 635 ----KYKKQDQNNNNDNSQALDSSEQMS-----------LIKF-PGETTVRINYIACGGE 678

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           H   +S M +++GWG   EGQLGLG        P LI  + H                  
Sbjct: 679 HIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKN---------------- 722

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                   ++ IACG  +SA V+  G L   G    G+ G G     L+  +  S   IQ
Sbjct: 723 --------IQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQA---LKKGFLLSFTLIQ 771

Query: 343 ----VEQIAAGLWHTVCIS--------VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
               ++ +A G  H + I+         +G  Y +G N  GQLG G  +  NVPK +   
Sbjct: 772 NLAPIKSVACGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNA 831

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS---IDRNIPSLV-PIHGF 446
               +R K V+CG   S  LT   QV  WG NKY      DS    D +IP L+  +   
Sbjct: 832 ---KERFKKVACGQDFSIGLTYGNQVYLWGNNKY----FCDSKITKDVDIPQLLQALEQA 884

Query: 447 LPRNIACGWWHTLLLAETTQI 467
             ++IAC +    +L +  +I
Sbjct: 885 QIKDIACSYKFCSVLNDKGEI 905



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 111/492 (22%), Positives = 198/492 (40%), Gaps = 89/492 (18%)

Query: 35  KSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQS-YLTSGKH 91
           +  I  P    +   D    + G  CG   ++  +   K++TWG    +GQ   L  G  
Sbjct: 326 RDDIFEPRHLIIEKKDYTYFIEGIACGKYHSMCLTRKKKILTWG----QGQGGRLGHGDE 381

Query: 92  GET--PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG----------WRECVPSAKV 139
            +   P+     ++   +  +AG +H  +++E   +YTWG                  K+
Sbjct: 382 DDVLVPKEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKL 441

Query: 140 TRDFG-------SAGSFQKDS-TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
             D         S G+F   + TG+ +     Q      + G+  + R++        E 
Sbjct: 442 IEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQG-----KYGKLGINRKQREGVFSRPEK 496

Query: 192 PASGDEFFTL--SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG---- 245
            +    F+ +   P  + +    +    AAG  H+L L+  G+++ WGY G+G LG    
Sbjct: 497 IS----FYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKG 552

Query: 246 ----LGSRIKMVPTPHL--IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGG 298
               L   I  +P   +  IP ++          L+++G +    +   SY V ++ACG 
Sbjct: 553 FEEHLPIEIGQIPGELIGKIPNIDE---------LIQRGDLKQ--EETFSYEVIQVACGV 601

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP------------------SYASSLMD 340
            ++  +T+ G +  FG   YGQ          R                   S   SL+ 
Sbjct: 602 LNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALDSSEQMSLIK 661

Query: 341 ------IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILE 393
                 +++  IA G  H   IS    ++ +G N  GQLG G V      P L+    + 
Sbjct: 662 FPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQ--IA 719

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLVPIHGFLP-RNI 451
            K  ++++CG  +SA ++  G++   G  + G+LGLG ++ +  + S   I    P +++
Sbjct: 720 HKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIKSV 779

Query: 452 ACGWWHTLLLAE 463
           ACG  H L +A+
Sbjct: 780 ACGPNHMLAIAD 791



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 47/269 (17%)

Query: 199  FTLSPCLV-TLNPGVKITKVAAGGRHTLILSDM--------GQVWGWGYGGEGQLGLGSR 249
            F LS  L+  L P   I  VA G  H L ++D         G  + WG   +GQLG+GS+
Sbjct: 763  FLLSFTLIQNLAP---IKSVACGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSK 819

Query: 250  IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
                     +P   H A  K+R                    K++ACG   S  +T    
Sbjct: 820  -----EDSNVPKKIHNA--KER-------------------FKKVACGQDFSIGLTYGNQ 853

Query: 310  LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG-- 367
            +  +G   Y  C    T D   P    +L   Q++ IA        ++ +G + ++G   
Sbjct: 854  VYLWGNNKYF-CDSKITKDVDIPQLLQALEQAQIKDIACSYKFCSVLNDKGEILIWGSYL 912

Query: 368  -NQFGQLGTGVDQAENVPKLLETPILESK-RAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
             ++  Q      +++N   + + P+ +     + +S G  HSA ++    + +WG  + G
Sbjct: 913  TDRIKQNQKKDKKSQNHLAITKFPMRKFDFLMETISAGQNHSAAVSVKRSLYTWGHAEGG 972

Query: 426  QLGLGDSIDRNI---PSLV-PIHGFLPRN 450
            +LGL +   +N    P LV  IH  + +N
Sbjct: 973  RLGLNEKEYKNAKIEPILVQSIHDIMQKN 1001



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 39/203 (19%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAAS 267
            N   +  KVA G   ++ L+   QV+ WG     +    S+I K V  P L+  LE A  
Sbjct: 830  NAKERFKKVACGQDFSIGLTYGNQVYLWG---NNKYFCDSKITKDVDIPQLLQALEQAQ- 885

Query: 268  GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
                                   +K+IAC  +  +V+ D G +L +G  L  +       
Sbjct: 886  -----------------------IKDIACSYKFCSVLNDKGEILIWGSYLTDRIKQNQKK 922

Query: 328  DQLRPSYAS------SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            D+   ++ +         D  +E I+AG  H+  +SV+  +Y +G  + G+LG    + +
Sbjct: 923  DKKSQNHLAITKFPMRKFDFLMETISAGQNHSAAVSVKRSLYTWGHAEGGRLGLNEKEYK 982

Query: 382  NV---PKLLET--PILESKRAKV 399
            N    P L+++   I++  R  +
Sbjct: 983  NAKIEPILVQSIHDIMQKNRQNL 1005


>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Monodelphis domestica]
          Length = 1170

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 144/295 (48%), Gaps = 45/295 (15%)

Query: 204 CLVTLNPGVKITKVAAGGR-HTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVP 254
           C+  L P  +  K+AA GR HTL+ ++ G+V+  G   EGQLGLG          +    
Sbjct: 80  CVKALKP--EKVKIAACGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFT 137

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------I 294
             H I  L  +A       L   G +     NS G+ G +                   I
Sbjct: 138 AQHKIKQL--SAGSNTSAALTEDGVLFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISWI 195

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL---MDIQVEQIAAGLW 351
           +CG  HSA VT  G L TFG    G+ G     +QL+      L   +  +V Q+A G  
Sbjct: 196 SCGYYHSAFVTTEGELYTFGEPENGKLGLSP--EQLKNHRIPQLVLGIPGKVNQVACGGG 253

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVL 410
           HTV ++ E  VY FG  QFGQLG G    E + PK+++   L++++ + ++CG  H+A++
Sbjct: 254 HTVALT-EEEVYTFGLGQFGQLGLGTFIFETSEPKVVKH--LQNQKIQYIACGENHTALI 310

Query: 411 TEDGQVLSWGWNKYGQLGLGDS--IDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           ++ G + ++G  ++G+LGLG     ++ +P+L      F+ R +ACG  H L+ A
Sbjct: 311 SDTGHMYTFGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGGCHMLVFA 365



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+A++T    L  FG   +GQ G GS     +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  + EG+VY  GGN  GQLG G D  E     L +      + K +S G+  SA LTED
Sbjct: 100 LVYTEEGKVYAAGGNSEGQLGLG-DTEERTTFQLVSFFTAQHKIKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G +  WG N  GQ+GL +  +  +PS V I G     I+CG++H+  + 
Sbjct: 159 GVLFMWGDNSEGQIGLAEEANVCVPSEVTI-GKPISWISCGYYHSAFVT 206



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 138/282 (48%), Gaps = 42/282 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----AASGKDR 271
           ++ G  HT +++   +++ +G    GQLGLGS+   V  P  +  L+      AA G++ 
Sbjct: 40  LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKT-TVNKPTCVKALKPEKVKIAACGRNH 98

Query: 272 PLL-VRQGSV-----NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+   +G V     NS G+ G                  +  +K+++ G   SA +T+ 
Sbjct: 99  TLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G     +   PS  +  +   +  I+ G +H+  ++ EG +Y FG 
Sbjct: 159 GVLFMWGDNSEGQIGLAEEANVCVPSEVT--IGKPISWISCGYYHSAFVTTEGELYTFGE 216

Query: 368 NQFGQLGTGVDQAEN--VPKL-LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            + G+LG   +Q +N  +P+L L  P     +   V+CG  H+  LTE+ +V ++G  ++
Sbjct: 217 PENGKLGLSPEQLKNHRIPQLVLGIP----GKVNQVACGGGHTVALTEE-EVYTFGLGQF 271

Query: 425 GQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
           GQLGLG  I + + P +V  +     + IACG  HT L+++T
Sbjct: 272 GQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDT 313



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 28/158 (17%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P LV   PG K+ +VA GG HT+ L++  +V+ +G G  GQLGLG+ I     P ++  L
Sbjct: 235 PQLVLGIPG-KVNQVACGGGHTVALTEE-EVYTFGLGQFGQLGLGTFIFETSEPKVVKHL 292

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           ++                          ++ IACG  H+A+++D G + TFG G +G+ G
Sbjct: 293 QNQK------------------------IQYIACGENHTALISDTGHMYTFGDGRHGKLG 328

Query: 323 HGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            G  N  +Q  P+  S+ +   V  +A G  H +  ++
Sbjct: 329 LGQENFTNQFVPTLCSNFLKFIVRLVACGGCHMLVFAI 366



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR---IKMVP 254
           F T  P +V      KI  +A G  HT ++SD G ++ +G G  G+LGLG      + VP
Sbjct: 281 FETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGRHGKLGLGQENFTNQFVP 340

Query: 255 T 255
           T
Sbjct: 341 T 341


>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
 gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 57  GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 151

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 152 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 211

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 212 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 269

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 270 KSNQSYPTPVTV 281



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 175 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 211 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 271 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 192

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 193 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 252

Query: 466 QI 467
           Q+
Sbjct: 253 QV 254



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 128/331 (38%), Gaps = 91/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 65  PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 120

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 159

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             +  T   P          + RR T   + +                         +  
Sbjct: 160 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 185

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G    + + D G+V+ WGY G GQLGLG+     PT    PC   A  G      +R
Sbjct: 186 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PT----PCRVAALQG------IR 234

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +
Sbjct: 235 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT 280

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 281 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGGRH+A+VT  G + ++G    G+ GHG  +D L P    SL +  +E +A G 
Sbjct: 314 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGE 373

Query: 351 WHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G     FG LG G + +  VPK +  P LE      +SCG  H+A
Sbjct: 374 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 432

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           V+T  GQ+ ++G   +G LG GD+   + P  V  + G      ACG WHT  + E
Sbjct: 433 VVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAVVE 488



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 127/246 (51%), Gaps = 18/246 (7%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G   K V  P  +  L+       
Sbjct: 418 GIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGD-TKSVSKPREVESLKG------ 470

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                 +  +++ G    + V EI  G   S+  + +G L T+G G  G+ GHG    +L
Sbjct: 471 -----HRTVISACGVWHTAAVVEIMVGNPSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKL 524

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLET 389
            P+  ++L+D    ++A G   TV ++  G VY  G   +GQLG    QA+  +P  +E 
Sbjct: 525 VPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN--PQADGKLPTRVEG 582

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            + +S   + ++CGA H AVLT   +V +WG    G+LG GD+ DRN P+LV  +     
Sbjct: 583 KLAKS-FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQV 641

Query: 449 RNIACG 454
           ++IACG
Sbjct: 642 KSIACG 647



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 7/153 (4%)

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G C  G   D L P    S + + V+ IA G  H   ++ +G ++ +G    G+LG GVD
Sbjct: 291 GSC-FGMKMDSLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVD 349

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRN 436
                PKL+++  L +   ++V+CG  H+  +T  G + +WG   Y  G LG G+ +   
Sbjct: 350 SDVLHPKLIDS--LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW 407

Query: 437 IPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           +P  V  P+ G    +I+CG WHT ++  + Q+
Sbjct: 408 VPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQL 440



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 29/181 (16%)

Query: 231 GQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
           G+++ WG G +G+LG G +  K+VPT     C+         P   R             
Sbjct: 502 GKLFTWGDGDKGRLGHGDKEAKLVPT-----CVAALVD----PNFCR------------- 539

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
               +ACG   +  +T +G + T G  +YGQ G+   + +L       L    VE+IA G
Sbjct: 540 ----VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAKSFVEEIACG 595

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            +H   ++    VY +G    G+LG G     N P L+E   L+ K+ K ++CG   +A 
Sbjct: 596 AYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEA--LKDKQVKSIACGTNFTAT 653

Query: 410 L 410
           +
Sbjct: 654 I 654



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 69/162 (42%), Gaps = 25/162 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G V+  G    GQLG       +P
Sbjct: 518 GDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP 577

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           T                            GK  +S+V+EIACG  H AV+T    + T+G
Sbjct: 578 T-------------------------RVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWG 612

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  G+ GHG T+D+  P+   +L D QV+ IA G   T  I
Sbjct: 613 KGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATI 654


>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
           [Gorilla gorilla gorilla]
          Length = 527

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 57  GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 151

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 152 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 211

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 212 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 269

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 270 KSNQSYPTPVTV 281



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 175 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 211 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 271 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 192

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 193 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 252

Query: 466 QI 467
           Q+
Sbjct: 253 QV 254



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 128/331 (38%), Gaps = 91/331 (27%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 65  PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 120

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+                     +++G+
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 159

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             +  T   P          + RR T   + +                         +  
Sbjct: 160 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 185

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G    + + D G+V+ WGY G GQLGLG+     PTP  +  L+           +R
Sbjct: 186 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PTPCRVAALQG----------IR 234

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         V+ +ACG  H+ V+TD G +  +G   YGQ G G+ ++Q  P+  +
Sbjct: 235 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT 280

Query: 337 SLMDIQVEQIAAGLWHTVCISVE-GRVYVFG 366
              D  +E  A    HT     + G VY++G
Sbjct: 281 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 116/254 (45%), Gaps = 28/254 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTLLLAETT 465
           ACG  HTL    ++
Sbjct: 300 ACGRQHTLAFVPSS 313



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 157/380 (41%), Gaps = 81/380 (21%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
           WGY     P  S  L  I A  ++CG  S + V    CGG     L   E G++ T G  
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           + +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG         
Sbjct: 61  NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
                         S G+   + TE +   P   ++  ++ +   + S         A+ 
Sbjct: 110 ------------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 155

Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
            +FFT                   SP  V    G+ + +VAAGG H+  LS  G V+GWG
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG 215

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
               GQLGL          H+              LL  Q             V  I+CG
Sbjct: 216 MNNAGQLGLSDEKDRESPCHV-------------KLLRTQ------------KVVYISCG 250

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-I 356
             H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 357 SVEGRVYVFGGNQFGQLGTG 376
              G +Y FG    GQLGTG
Sbjct: 311 PSSGLIYAFGCGARGQLGTG 330



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKPE 76

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
            +        G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 77  QI--------GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPGI-STNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 171/425 (40%), Gaps = 101/425 (23%)

Query: 38  ILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
           +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K  + P
Sbjct: 22  VLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKP 75

Query: 96  EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
           E        ++V  + G AH +++ + G+VY WG                      DS G
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL---------------------DSDG 114

Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
           +   L             EE ++  +   +  +                       ++I 
Sbjct: 115 QLGLL-----------GSEECIRVPRNIKSLSD-----------------------IQIV 140

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L             
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL------------- 187

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPS 333
                      G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+  P+
Sbjct: 188 ----------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN 234

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPIL 392
              SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E   L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---L 291

Query: 393 ESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-----PIHGF 446
                  ++CG +H SA +   G++ S+G    GQLG G + +R  P  V     P +G 
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQ 351

Query: 447 LPRNI 451
            P +I
Sbjct: 352 CPPDI 356



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGLDCKKQTSPQLIKSLVGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------VGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158


>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
           harrisii]
          Length = 552

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 122/253 (48%), Gaps = 30/253 (11%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +GD   ++ P  V    G KI  ++ G G H +I +D G+V+ WG+    QLG G+    
Sbjct: 81  TGDILHSIEPRRVDHLCGKKIACLSYGSGPHVVIATDEGEVYTWGHNAYNQLGNGT---- 136

Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
             T H L+P                    + S   G   V E+ACG  HS V+T  G + 
Sbjct: 137 --TNHGLVP-------------------THISTNLGNRKVIEVACGSHHSLVLTSDGEVF 175

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV-EQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +G+   GQ G GST +Q  P   +  +  ++   IA G   ++ +   G VYV+G N  
Sbjct: 176 AWGYNNSGQVGSGSTANQPIPRKVTGCLQNKIATTIACGQMCSMAVVESGEVYVWGYNGN 235

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           GQLG G   + N P       L+  R   + CG  H+ VLT++G + +WG N YGQLG G
Sbjct: 236 GQLGLG--SSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWGANSYGQLGTG 293

Query: 431 DSIDRNIPSLVPI 443
           +  +++ P+ V +
Sbjct: 294 NKSNQSYPTPVSV 306



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 103/178 (57%), Gaps = 7/178 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + TD G + T+G   Y Q G+G+TN  L P++ S+ L + +V ++
Sbjct: 99  KKIACLSYGSGPHVVIATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHISTNLGNRKVIEV 158

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G  H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K A  ++CG   
Sbjct: 159 ACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKV-TGCLQNKIATTIACGQMC 217

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAE 463
           S  + E G+V  WG+N  GQLGLG S ++  P  +  + G     I CG+ HTL+L +
Sbjct: 218 SMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTD 275



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPG-VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L P  ++ N G  K+ +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 141 LVPTHISTNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRKV 199

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++  +                          IACG   S  V ++G +  +G+   
Sbjct: 200 TGCLQNKIA------------------------TTIACGQMCSMAVVESGEVYVWGYNGN 235

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V +I  G  HT+ ++ EG +Y +G N +GQLGTG  
Sbjct: 236 GQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWGANSYGQLGTGNK 295

Query: 379 QAENVPKLLETPI-LESKRA-KVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G +  WG
Sbjct: 296 SNQSYP----TPVSVEKDRVIEIAACHSAHTSAAKTQSGHIYMWG 336



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 17/201 (8%)

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
           D   L+RQ  V   G AG   +             T+   +   G    G  G G     
Sbjct: 41  DELKLIRQACV--FGSAGNEVLYS-----------TENDEVFVLGTNCSGCLGTGDILHS 87

Query: 330 LRPSYASSLMDIQVEQIAAGLW-HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           + P     L   ++  ++ G   H V  + EG VY +G N + QLG G      VP  + 
Sbjct: 88  IEPRRVDHLCGKKIACLSYGSGPHVVIATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHIS 147

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGF 446
           T  L +++   V+CG+ HS VLT DG+V +WG+N  GQ+G G + ++ IP  V   +   
Sbjct: 148 TN-LGNRKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNK 206

Query: 447 LPRNIACGWWHTLLLAETTQI 467
           +   IACG   ++ + E+ ++
Sbjct: 207 IATTIACGQMCSMAVVESGEV 227



 Score = 45.1 bits (105), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 69/175 (39%), Gaps = 26/175 (14%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP ++ G    K      CG   ++A  ESG++  WG  
Sbjct: 174 VFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKIATTIACGQMCSMAVVESGEVYVWGY- 232

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
              G   L  G  G  P P  +       V K   G+AH + +T+ G +Y WG       
Sbjct: 233 --NGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWG------- 283

Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
                    A S+ +  TG +S  + PT  +   D+           TS+A+ +S
Sbjct: 284 ---------ANSYGQLGTGNKSNQSYPTPVSVEKDRVIEIAACHSAHTSAAKTQS 329


>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
           KNP414]
 gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
           KNP414]
          Length = 1224

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 127/264 (48%), Gaps = 31/264 (11%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHL-IPCLEHAASGKDRPLLVR-Q 277
           G HT+ +   G VWGWGY G GQLG G S    VP   + +  ++  A G++  + +R  
Sbjct: 698 GNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMIAGGENHTVALRSD 757

Query: 278 GSVNSSGKAGRSYVKE--------------------IACGGRHSAVVTDAGALLTFGWGL 317
           G++++ G  G   + +                    ++ G  HS  +   G +  FG+  
Sbjct: 758 GTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNG 817

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           YGQ G G+T+ Q  P     L    V  IAAG   ++ +  +G V+ +G N +G+LG G 
Sbjct: 818 YGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGT 875

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
               +VP  ++  +L   +A  ++ G  H   L +DG V +WG+N  G+LG   +I ++ 
Sbjct: 876 TTRSSVP--VQVALLTDVKA--IAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQST 931

Query: 438 PSLVPIHGFLPRNIACGWWHTLLL 461
           P    + G   + IA G +HTL L
Sbjct: 932 PVQSGVTGI--KGIAAGPYHTLAL 953



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 131/271 (48%), Gaps = 32/271 (11%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
            GD+  T     V ++     T V+AG  H+L L   G VW +GY G GQLG G+      
Sbjct: 772  GDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQ-R 830

Query: 255  TPHLIPCLE---HAASGKDRPLLVR-QGSV-----NSSGKAGR---------------SY 290
            TP  +  L      A+GKD  L ++  G+V     N+ G+ G                + 
Sbjct: 831  TPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTD 890

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            VK IA G  H   +   G++  +G+   G+ G+ ST  Q  P   S +  I+   IAAG 
Sbjct: 891  VKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQSTP-VQSGVTGIK--GIAAGP 947

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            +HT+ +  +G V+ +G N +GQLG+G + + +VP  +  P L S  +  ++ G   S   
Sbjct: 948  YHTLALKSDGTVWSWGYNGYGQLGSGNNTSRSVPAAI--PGLASMAS--IAAGENQSIAY 1003

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              DG + SWG N  GQLG G ++D N+P  V
Sbjct: 1004 GNDGILYSWGRNANGQLGNGTTVDTNVPHKV 1034



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 123/330 (37%), Gaps = 53/330 (16%)

Query: 10   ENEKMEECKETVVYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
            EN  +    +  ++ WGY   G   + S      P ++    +W  V  G    +LA   
Sbjct: 748  ENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAG-ENHSLALKS 806

Query: 69   SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
             G +  +G     G   L  G       P  +     VV  AAG    +++   G V++W
Sbjct: 807  DGTVWAFGY---NGYGQLGDGTTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSW 863

Query: 129  GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR---AGEE---VVKRRKT 182
            G             +G  G    + T  +S++P + A  +D +   AG+     +K+  +
Sbjct: 864  GQNT----------YGELG----NGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGS 909

Query: 183  SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
              A   + N   G+   T+S      +    I  +AAG  HTL L   G VW WGY G G
Sbjct: 910  VFAWGYNGNGELGNS-STISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYG 968

Query: 243  QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
            QLG G+       P  IP L   AS                          IA G   S 
Sbjct: 969  QLGSGNNTSR-SVPAAIPGLASMAS--------------------------IAAGENQSI 1001

Query: 303  VVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               + G L ++G    GQ G+G+T D   P
Sbjct: 1002 AYGNDGILYSWGRNANGQLGNGTTVDTNVP 1031


>gi|307176968|gb|EFN66274.1| X-linked retinitis pigmentosa GTPase regulator-like protein
            [Camponotus floridanus]
          Length = 1719

 Score =  110 bits (275), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 30/209 (14%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            V++  V+ G  HTL +++ G ++ WG    GQLGLG ++    +P LI  L         
Sbjct: 867  VEVFSVSCGHCHTLAVTNNG-IYAWGSSQFGQLGLG-KVLQCSSPELIISL--------- 915

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                            +  + +   G  HS  +T  G + T+GWG++GQ GHG+T++++ 
Sbjct: 916  ---------------AQEIIIDAVAGQYHSVALTADGRVFTWGWGIHGQLGHGNTDEKIT 960

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            PS  ++L+ + V  I+AG  HT+ +SV+G VY FG N  GQLG G +   ++P  +  P 
Sbjct: 961  PSLVTALLGVVVRCISAGYAHTLALSVDGIVYAFGSNVLGQLGIGGNAKSSIPTKISLP- 1019

Query: 392  LESKRAKVVSCGARHSAVLTEDGQVLSWG 420
                   +++ G  H+  L++  ++  WG
Sbjct: 1020 ---DGIILINTGYFHNLALSDTNKLYVWG 1045



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 8/175 (4%)

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL---MDIQVEQIAA 348
           + ++ G  H A++ + G + T+G  + G  G GS+  +    +A      M+++V  ++ 
Sbjct: 816 RSLSAGFSHVALIRN-GNIYTWGSSVQGCLGTGSSVLRYGAPHAICFFRSMEVEVFSVSC 874

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G  HT+ ++  G +Y +G +QFGQLG G     + P+L+ +   E     V   G  HS 
Sbjct: 875 GHCHTLAVTNNG-IYAWGSSQFGQLGLGKVLQCSSPELIISLAQEIIIDAVA--GQYHSV 931

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
            LT DG+V +WGW  +GQLG G++ ++  PSLV  + G + R I+ G+ HTL L+
Sbjct: 932 ALTADGRVFTWGWGIHGQLGHGNTDEKITPSLVTALLGVVVRCISAGYAHTLALS 986



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 110/462 (23%), Positives = 168/462 (36%), Gaps = 126/462 (27%)

Query: 22   VYMWGY-LPGTSPEKSPILS-PIPARLCGGDSWK-DVCGGGCGF--ALATSESGKLITWG 76
            +Y WG  + G     S +L    P  +C   S + +V    CG    LA + +G +  WG
Sbjct: 833  IYTWGSSVQGCLGTGSSVLRYGAPHAICFFRSMEVEVFSVSCGHCHTLAVTNNG-IYAWG 891

Query: 77   SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
            S+   GQ  L       +PE      +  ++ A AG  H V++T  G V+TWGW      
Sbjct: 892  SSQ-FGQLGLGKVLQCSSPELIISLAQEIIIDAVAGQYHSVALTADGRVFTWGW------ 944

Query: 137  AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
                   G  G     +T        E+  PS                            
Sbjct: 945  -------GIHGQLGHGNT-------DEKITPS---------------------------- 962

Query: 197  EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPT 255
                    LVT   GV +  ++AG  HTL LS  G V+ +G    GQLG+G   K  +PT
Sbjct: 963  --------LVTALLGVVVRCISAGYAHTLALSVDGIVYAFGSNVLGQLGIGGNAKSSIPT 1014

Query: 256  PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
               +P         D  +L+  G                     H+  ++D   L  + W
Sbjct: 1015 KISLP---------DGIILINTGYF-------------------HNLALSDTNKL--YVW 1044

Query: 316  GLYGQCGHGSTNDQLR---------------------PSYASSL-MDIQVEQIAAGLWHT 353
            G   Q        Q R                     PS   +L  D+  + +       
Sbjct: 1045 GASPQVLRLQAQAQKRTRILEQQDERKNKTLEESEKMPSGVINLNEDLLEDSVQTVETER 1104

Query: 354  VCISVEGRVYVFGGNQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVSCGARHSAVLT 411
            +  SVE R    G      +   +D+++    P +++T ++  +  + +S G  H+A++T
Sbjct: 1105 ITSSVETRKKPSGSANLRNIEL-IDESQAHLKPSIVDTSLIRGQITQ-ISAGCHHNALIT 1162

Query: 412  EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC 453
            +DG + +WG N  GQLG G   +      VPI   L  N AC
Sbjct: 1163 KDGSLYTWGRNLDGQLGNGTRKE------VPIPTPLSYNPAC 1198



 Score = 47.0 bits (110), Expect = 0.022,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 21/157 (13%)

Query: 288  RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
            R  + +I+ G  H+A++T  G+L T+G  L GQ G+G+  +   P+  S      + QI 
Sbjct: 1145 RGQITQISAGCHHNALITKDGSLYTWGRNLDGQLGNGTRKEVPIPTPLSYNPACILAQIP 1204

Query: 348  AGLWHTVCISVEGRVYVFGGNQFGQLG-------------TGVDQAENVP---KLLETPI 391
                HT     + +     G +   L              TGV ++EN+    K    PI
Sbjct: 1205 PR--HTDFKKTQNQRDSDNGAKSNDLSTNNKNAHENNGNVTGVSKSENIDHNNKERSNPI 1262

Query: 392  LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            + +     + CG  ++  +   G VL+WG N   QLG
Sbjct: 1263 INTVG---IVCGYDYTVAIQPGGTVLAWGNNNRAQLG 1296



 Score = 42.7 bits (99), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 329  QLRPSYA-SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
             L+PS   +SL+  Q+ QI+AG  H   I+ +G +Y +G N  GQLG G  +   +P   
Sbjct: 1133 HLKPSIVDTSLIRGQITQISAGCHHNALITKDGSLYTWGRNLDGQLGNGTRKEVPIP--- 1189

Query: 388  ETPILESKRAKVVSCGARHS 407
             TP+  +    +     RH+
Sbjct: 1190 -TPLSYNPACILAQIPPRHT 1208


>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
 gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
          Length = 1239

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 127/264 (48%), Gaps = 31/264 (11%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHL-IPCLEHAASGKDRPLLVR-Q 277
           G HT+ +   G VWGWGY G GQLG G S    VP   + +  ++  A G++  + +R  
Sbjct: 713 GNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMIAGGENHTVALRSD 772

Query: 278 GSVNSSGKAGRSYVKE--------------------IACGGRHSAVVTDAGALLTFGWGL 317
           G++++ G  G   + +                    ++ G  HS  +   G +  FG+  
Sbjct: 773 GTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNG 832

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           YGQ G G+T+ Q  P     L    V  IAAG   ++ +  +G V+ +G N +G+LG G 
Sbjct: 833 YGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGT 890

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
               +VP  ++  +L   +A  ++ G  H   L +DG V +WG+N  G+LG   +I ++ 
Sbjct: 891 TTRSSVP--VQVALLTDVKA--IAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQST 946

Query: 438 PSLVPIHGFLPRNIACGWWHTLLL 461
           P    + G   + IA G +HTL L
Sbjct: 947 PVQSGVTGI--KGIAAGPYHTLAL 968



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 130/271 (47%), Gaps = 32/271 (11%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
            GD+  T     V ++     T V+AG  H+L L   G VW +GY G GQLG G+      
Sbjct: 787  GDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQ-R 845

Query: 255  TPHLIPCLE---HAASGKDRPLLVR-QGSV-----NSSGKAGR---------------SY 290
            TP  +  L      A+GKD  L ++  G+V     N+ G+ G                + 
Sbjct: 846  TPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTD 905

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            VK IA G  H   +   G++  +G+   G+ G+ ST  Q  P   S +  I+   IAAG 
Sbjct: 906  VKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQSTP-VQSGVTGIK--GIAAGP 962

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            +HT+ +  +G V+ +G N +GQLG G + + +VP  +  P L S  +  ++ G   S   
Sbjct: 963  YHTLALKSDGTVWSWGYNGYGQLGNGNNTSRSVPAAI--PGLASIAS--IAAGENQSIAY 1018

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              DG + SWG N  GQLG G ++D N+P  V
Sbjct: 1019 GNDGILYSWGRNANGQLGNGTTVDTNVPHKV 1049



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 123/330 (37%), Gaps = 53/330 (16%)

Query: 10   ENEKMEECKETVVYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
            EN  +    +  ++ WGY   G   + S      P ++    +W  V  G    +LA   
Sbjct: 763  ENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAG-ENHSLALKS 821

Query: 69   SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
             G +  +G     G   L  G       P  +     VV  AAG    +++   G V++W
Sbjct: 822  DGTVWAFGY---NGYGQLGDGTTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSW 878

Query: 129  GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR---AGEE---VVKRRKT 182
            G             +G  G    + T  +S++P + A  +D +   AG+     +K+  +
Sbjct: 879  GQNT----------YGELG----NGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGS 924

Query: 183  SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
              A   + N   G+   T+S      +    I  +AAG  HTL L   G VW WGY G G
Sbjct: 925  VFAWGYNGNGELGNS-STISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYG 983

Query: 243  QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
            QLG G+       P  IP L   AS                          IA G   S 
Sbjct: 984  QLGNGNNTSR-SVPAAIPGLASIAS--------------------------IAAGENQSI 1016

Query: 303  VVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               + G L ++G    GQ G+G+T D   P
Sbjct: 1017 AYGNDGILYSWGRNANGQLGNGTTVDTNVP 1046


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 167/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
          Length = 371

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 130/279 (46%), Gaps = 49/279 (17%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMV 253
           G+    L P  V L     +T V+AG RH   +   G V+ WG G  GQLGLG+ +    
Sbjct: 65  GETLDVLYPQKVNLE---GVTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTNKSHFT 121

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
           P P   P           P                  VK ++CGG HS  +T+ G L   
Sbjct: 122 PQPLSFPM----------P------------------VKALSCGGSHSLFITEDGRLYAT 153

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQ-------VEQIAAGLWHTVCISVEGRVYVFG 366
           G G  GQ G GS    L P      +++Q       V+    G   +V  +  G+V+ FG
Sbjct: 154 GRGKEGQLGTGSQESVLSP------VEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFG 207

Query: 367 GNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
            + +GQLG G   +    PK  E  +L  K  + ++ G  H+A +T DG++ +WG+ + G
Sbjct: 208 SDDYGQLGLGQFARYAMTPK--EVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSG 265

Query: 426 QLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           QLG G+++D ++P LV  +     +++ACG  HT+ + +
Sbjct: 266 QLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAVID 304



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 118/286 (41%), Gaps = 75/286 (26%)

Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR-HTLILSDMGQVWGWGY 238
           R  ++ R +     +G +   LSP  V +  G    K A  G+  ++I ++ GQV+ +G 
Sbjct: 149 RLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGS 208

Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
              GQLGLG   +   TP  +  L    +GK+                    V+ IA G 
Sbjct: 209 DDYGQLGLGQFARYAMTPKEVAVL----AGKN--------------------VRSIAAGD 244

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            H+A VT  G L T+G+G  GQ G+G+T D   P     L +++V+ +A G  HTV +  
Sbjct: 245 YHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAVID 304

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            G                    +    L+ + +LES                   G+V  
Sbjct: 305 RG-------------------LKEQLMLISSQVLES-------------------GEVFV 326

Query: 419 WGWNKYGQLGLGDSID-----RNIPSLVPIHGFLPRNIACGWWHTL 459
            G  + GQLG GD ++     R++P  V       + +ACG  HTL
Sbjct: 327 MGRGREGQLGRGDIVESPAVYRSVPLQV-------QQVACGTSHTL 365



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 127/329 (38%), Gaps = 81/329 (24%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVT 120
           A A    G +  WG     GQ  L + K   TP+P  FP+P +A     + G +H + +T
Sbjct: 91  AAAIVGGGDVFVWGRGFS-GQLGLGTNKSHFTPQPLSFPMPVKA----LSCGGSHSLFIT 145

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL--PTE-QAPPSDKRAGEEVV 177
           E G +Y  G              G  G      TG Q ++  P E Q P    R      
Sbjct: 146 EDGRLYATGR-------------GKEGQL---GTGSQESVLSPVEVQMPEGSGRVKAAEC 189

Query: 178 KRRKTSSAREESENPASG-DEF----------FTLSPCLVTLNPGVKITKVAAGGRHTLI 226
            +  +  A E  +    G D++          + ++P  V +  G  +  +AAG  H   
Sbjct: 190 GKDFSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAA 249

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           ++  G+++ WGYG  GQLG G+ + +                   P+LVR+         
Sbjct: 250 VTSDGKLYTWGYGRSGQLGNGNTVDV-----------------SLPVLVRE--------L 284

Query: 287 GRSYVKEIACGGRHSAVVTD----------------AGALLTFGWGLYGQCGHGSTNDQL 330
               V+ +ACG  H+  V D                +G +   G G  GQ G G   +  
Sbjct: 285 QNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRGDIVES- 343

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            P+   S+  +QV+Q+A G  HT+   V 
Sbjct: 344 -PAVYRSV-PLQVQQVACGTSHTLARGVR 370



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 3/102 (2%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS- 88
           GT  ++S +LSP+  ++  G         G  F++  +ESG++ T+GS DD GQ  L   
Sbjct: 162 GTGSQES-VLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGS-DDYGQLGLGQF 219

Query: 89  GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
            ++  TP+   +    +V   AAG  H  +VT  G++YTWG+
Sbjct: 220 ARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGY 261


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H L LSD GQ++ WG G +GQLGL +    V  P +I              
Sbjct: 86  IVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  HS  +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 160/378 (42%), Gaps = 77/378 (20%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  +V  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHNLALSDRGQLFSWG----------- 109

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
                AGS      G+   + TE A   P   ++  ++ +   + S     S   A+  +
Sbjct: 110 -----AGS-----DGQLGLMTTEDAVAVPRVIQKLNQQTI--LQVSCGNWHSLALAADGQ 157

Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
           FFT                   SP  V    G+ + +VAAGG H+  LS  G V+GWG  
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217

Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
             GQLGL                E   S     LL  Q  V             I+CG  
Sbjct: 218 NAGQLGLSDE-------------EDRESPCHVKLLRTQKVV------------YISCGEE 252

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISV 358
           H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +  
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS 312

Query: 359 EGRVYVFGGNQFGQLGTG 376
            G +Y FG    GQLGTG
Sbjct: 313 SGLIYAFGCGARGQLGTG 330



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  H+  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P ++  ++      ++CG WH+L LA   Q 
Sbjct: 116 LGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQF 158


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         ++  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V +IACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         ++  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V +IACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 117/252 (46%), Gaps = 40/252 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            +  +A G  HT+ L   G VW WG+   GQLG G                 A + +  P
Sbjct: 692 DVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGG-----------------ATTNRSTP 734

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
           + V+          G + +  IA G  HS  +   G +  +G+  YGQ G GST D L P
Sbjct: 735 VQVK----------GLADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLTP 784

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
              S L DI    IA G  HT+ +  +G V+ +G N+ GQLG G            TP+ 
Sbjct: 785 VQVSGLTDIIA--IAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNS------STPVQ 836

Query: 393 ESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR- 449
            S    V++  AR  H+  L  DG V +WG N YGQLG G + +R++P  V + G     
Sbjct: 837 VSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLP--VQVIGLTDVI 894

Query: 450 NIACGWWHTLLL 461
            IA G++HT+ L
Sbjct: 895 AIAGGYYHTIAL 906



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 111/250 (44%), Gaps = 36/250 (14%)

Query: 213  KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
             I  +A G  HT+ L   G VW WGY G GQLG GS                    +  P
Sbjct: 1140 NIIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTN-----------------RSTP 1182

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + V          +G + V  IA    H+  +   G +  +G+  YGQ G GST ++  P
Sbjct: 1183 VQV----------SGLTDVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTP 1232

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               S L D  V  IA G  HT+ +  +G V+ +G N  GQLG G      + +L    + 
Sbjct: 1233 VQVSGLTD--VIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDG----TTINRLTPVQVS 1286

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR-NI 451
                A  ++ G  H+  L  D  V +WG N YGQLG G +I+R  P  V + G      I
Sbjct: 1287 GLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTP--VQVSGLTDAIAI 1344

Query: 452  ACGWWHTLLL 461
            A G +HT+ L
Sbjct: 1345 AGGDYHTIAL 1354



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 129/297 (43%), Gaps = 36/297 (12%)

Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-- 248
           N   GDE  T     V ++    +  +A G  HT+ L   G VW WG    GQLG GS  
Sbjct: 172 NGQLGDESTTNRSTPVQVSGLTDVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTT 231

Query: 249 -RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGK---------------AG 287
            R   V    L   +  A        L   G+V     N  G+                G
Sbjct: 232 DRSTPVQVSGLTDVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGG 291

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
            S V  IA G  H+  +   G +  +G    GQ G GST ++  P   S L D  V  IA
Sbjct: 292 LSDVIAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLAD--VIAIA 349

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GAR 405
            G  HT+ +  +G V+ +G N+ GQLG G            TP+  S  A V++   G  
Sbjct: 350 GGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNR------STPVQVSGLADVIAIAGGVY 403

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR-NIACGWWHTLLL 461
           H+  +  DG + +WG+N YGQLG G +I+ + P  V ++G      IA G++HT+ +
Sbjct: 404 HTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTP--VQVNGLTDVIAIAGGYYHTIAM 458



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 176/453 (38%), Gaps = 64/453 (14%)

Query: 42  IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
           IP ++ GG S      GG    +A    G +  WG  D+EG   L  G       P  + 
Sbjct: 285 IPVKV-GGLSDVIAIAGGNAHTIALKSDGTVWAWG--DNEGGQ-LGDGSTTNRSTPVKVS 340

Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
             A V+  A G++H + +   G V+TWG  E              G     ST  +S  P
Sbjct: 341 GLADVIAIAGGYSHTIVLRSDGTVWTWGHNE-------------GGQLGDGSTTNRST-P 386

Query: 162 TEQAPPSDKRA------GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
            + +  +D  A          VK   T  A   +     GD     S   V +N    + 
Sbjct: 387 VQVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLTDVI 446

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-------------IKMVPTPHLIPCL 262
            +A G  HT+ +   G VW WG+   GQLG GS              +K V TP +    
Sbjct: 447 AIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGS 506

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSY-------------VKEIACGGRHSAVVTDAGA 309
               S     L    G VN +G A  ++              K I+CG   + V    G 
Sbjct: 507 ATCVSLSSALL---NGWVNGNGVATTAWFDYGTSTGMYFDATKTISCGTGSTYVGATLGD 563

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           L    W  Y  C   S N      Y S    +   QI+AG +HT+ +  +G V+ +G N 
Sbjct: 564 LTP--WTTY-YCRIASQNIG-GIYYGSETTFMPRTQISAGAYHTLTLKPDGTVWAYGANW 619

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
             QLG G     + P      +     A  ++ G  H+  L  DG V +WGWN  GQLG 
Sbjct: 620 NSQLGDGSTTDSSTP----VQVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGD 675

Query: 430 GDSIDRNIPSLVPIHGFLPR-NIACGWWHTLLL 461
           G +I+R+ P  V + G      IA G +HT+ L
Sbjct: 676 GTTINRSTP--VQVIGLTDVIAIAGGDYHTIAL 706



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 121/274 (44%), Gaps = 38/274 (13%)

Query: 215  TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH--AASGKDRP 272
            ++++AG  HTL L   G VW  G    GQLG G+ I    TP  +  L    A +G D  
Sbjct: 1042 SQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINR-STPVQVSGLTDVIAIAGGDYH 1100

Query: 273  LLVRQGS-------VNSSGKAGRSYVKE---------------IACGGRHSAVVTDAGAL 310
             +  +          NS G+ G   +                 IA G  H+  +   G +
Sbjct: 1101 TIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYLTNIIAIAGGYVHTIALKSDGTV 1160

Query: 311  LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
              +G+  YGQ G GST ++  P   S L D  V  IA    HTV +  +G V+ +G N +
Sbjct: 1161 WAWGYNGYGQLGDGSTTNRSTPVQVSGLTD--VIAIAGEYVHTVALKSDGTVWAWGYNGY 1218

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLG 428
            GQLG G            TP+  S    V++   G  H+  L  DG V +WGWN  GQLG
Sbjct: 1219 GQLGDGSTTNR------STPVQVSGLTDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQLG 1272

Query: 429  LGDSIDRNIPSLVPIHGFLPR-NIACGWWHTLLL 461
             G +I+R  P  V + G      IA G +HT+ L
Sbjct: 1273 DGTTINRLTP--VQVSGLTDAIAIAGGDYHTIAL 1304



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 142/359 (39%), Gaps = 60/359 (16%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           GG    +A    G +  WG+ ++ GQ  L  G   +   P  +     V+  A G+AH +
Sbjct: 200 GGAYHTIALKSDGTVWAWGN-NEGGQ--LGDGSTTDRSTPVQVSGLTDVIAIAGGYAHTI 256

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD------KR 171
           ++   G V+ WG  E              G    D +    ++P +    SD        
Sbjct: 257 ALKSDGTVWAWGDNE--------------GGRLGDGSTTNRSIPVKVGGLSDVIAIAGGN 302

Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
           A    +K   T  A  ++E    GD   T     V ++    +  +A G  HT++L   G
Sbjct: 303 AHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADVIAIAGGYSHTIVLRSDG 362

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
            VW WG+   GQLG GS                    +  P+ V          +G + V
Sbjct: 363 TVWTWGHNEGGQLGDGSTTN-----------------RSTPVQV----------SGLADV 395

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
             IA G  H+  V   G +  +G+  YGQ G G+T +   P   + L D  V  IA G +
Sbjct: 396 IAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLTD--VIAIAGGYY 453

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP--------KLLETPILESKRAKVVSC 402
           HT+ +  +G V+ +G N +GQLG G     + P        K + TP + +  A  VS 
Sbjct: 454 HTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVSL 512



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 113/248 (45%), Gaps = 36/248 (14%)

Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
           ++++AG  HTL L   G VW WG    GQLG                 + + + +  P+ 
Sbjct: 146 SQISAGAYHTLTLKPDGAVWTWGANWNGQLG-----------------DESTTNRSTPVQ 188

Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
           V          +G + V  IA G  H+  +   G +  +G    GQ G GST D+  P  
Sbjct: 189 V----------SGLTDVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQ 238

Query: 335 ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
            S L D  V  IA G  HT+ +  +G V+ +G N+ G+LG G     ++P      +   
Sbjct: 239 VSGLTD--VIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIP----VKVGGL 292

Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR-NIAC 453
                ++ G  H+  L  DG V +WG N+ GQLG G + +R+ P  V + G      IA 
Sbjct: 293 SDVIAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTP--VKVSGLADVIAIAG 350

Query: 454 GWWHTLLL 461
           G+ HT++L
Sbjct: 351 GYSHTIVL 358



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 133/346 (38%), Gaps = 41/346 (11%)

Query: 83  QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
            S L  G   ++  P  +      +  A G  H +++   G V+TWGW         +  
Sbjct: 620 NSQLGDGSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNN-------SGQ 672

Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
            G   +  + ST  Q    T+    +        +K   T      +     G    T  
Sbjct: 673 LGDGTTINR-STPVQVIGLTDVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNR 731

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
              V +     I  +A G  H++ L   G VW WGY G GQLG GS      T HL P  
Sbjct: 732 STPVQVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGST-----TDHLTPVQ 786

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                  +G + +  IA G  H+  +   G +  +G    GQ G
Sbjct: 787 ----------------------VSGLTDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLG 824

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            G+T +   P   S L D  V  + A L+HT+ +  +G V+ +G N +GQLG G     +
Sbjct: 825 DGTTTNSSTPVQVSGLTD--VIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERS 882

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
           +P      ++       ++ G  H+  L  DG V +WG+N   QLG
Sbjct: 883 LP----VQVIGLTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLG 924



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 163/444 (36%), Gaps = 77/444 (17%)

Query: 58   GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
            GG   ++A    G +  WG     G   L  G   +   P  +     ++  A G+ H +
Sbjct: 748  GGYVHSIALKSDGTVWAWGY---NGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHTI 804

Query: 118  SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
            ++   G V+ WG  E              G    D T   S+ P + +  +D  A    V
Sbjct: 805  ALKSDGTVWAWGHNE--------------GGQLGDGTTTNSSTPVQVSGLTDVIA----V 846

Query: 178  KRRKTSSAREESENPA----------SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
              R   +   +S+              GD   T     V +     +  +A G  HT+ L
Sbjct: 847  TARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIGLTDVIAIAGGYYHTIAL 906

Query: 228  SDMGQVWGWGYGGEGQLG-------------LGSRIKMVPTPHLI----------PCLEH 264
               G VW WGY G  QLG             L   +  V TP +I            L +
Sbjct: 907  KSDGAVWAWGYNGNNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITGSTTCVSLSSVLLN 966

Query: 265  AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL---TFGWGLYGQC 321
                 +R          +S          I CG   + +    G+L    T+ + +  Q 
Sbjct: 967  GWVDGNRAATTAWFDYGTSSGVYFDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQN 1026

Query: 322  GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
              G        SY S  + +   QI+AG +HT+ +  +G V+  G N  GQLG G     
Sbjct: 1027 SRG-------ISYGSETIFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINR 1079

Query: 382  NVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
                   TP+  S    V++   G  H+  L  D  V +WG N YGQLG G   +R+IP+
Sbjct: 1080 ------STPVQVSGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPT 1133

Query: 440  LVPIHGFLPRNIAC--GWWHTLLL 461
             V    +L   IA   G+ HT+ L
Sbjct: 1134 PVT---YLTNIIAIAGGYVHTIAL 1154



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 140/348 (40%), Gaps = 55/348 (15%)

Query: 58   GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
            GG    +A      +  WGS +  GQ  L  G       P P+    +++  A G+ H +
Sbjct: 1096 GGDYHTIALKSDNTVWAWGS-NSYGQ--LGDGTITNRSIPTPVTYLTNIIAIAGGYVHTI 1152

Query: 118  SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD--KRAGEE 175
            ++   G V+ WG+            +G  G    D +    + P + +  +D    AGE 
Sbjct: 1153 ALKSDGTVWAWGYNG----------YGQLG----DGSTTNRSTPVQVSGLTDVIAIAGEY 1198

Query: 176  V----VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
            V    +K   T  A   +     GD   T     V ++    +  +A G  HT+ L   G
Sbjct: 1199 VHTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKSDG 1258

Query: 232  QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
             VW WG+   GQLG G+ I  + TP  +  L  A +                        
Sbjct: 1259 TVWTWGWNNSGQLGDGTTINRL-TPVQVSGLTDAIA------------------------ 1293

Query: 292  KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
              IA G  H+  +     +  +G   YGQ G G+T ++L P   S L D     IA G +
Sbjct: 1294 --IAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSGLTD--AIAIAGGDY 1349

Query: 352  HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRA 397
            HT+ +  +  V+ +G N +GQLG  V  A ++   + L +PI+ +  A
Sbjct: 1350 HTIALKSDNTVWAWGSNSYGQLGD-VSTANSLTPAQCLLSPIVSTGTA 1396



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 67/132 (50%), Gaps = 11/132 (8%)

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
           SY S    I   QI+AG +HT+ +  +G V+ +G N  GQLG      +       TP+ 
Sbjct: 135 SYGSETTFIPRSQISAGAYHTLTLKPDGAVWTWGANWNGQLG------DESTTNRSTPVQ 188

Query: 393 ESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR- 449
            S    V++   GA H+  L  DG V +WG N+ GQLG G + DR+ P  V + G     
Sbjct: 189 VSGLTDVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTP--VQVSGLTDVI 246

Query: 450 NIACGWWHTLLL 461
            IA G+ HT+ L
Sbjct: 247 AIAGGYAHTIAL 258



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 114/493 (23%), Positives = 176/493 (35%), Gaps = 103/493 (20%)

Query: 22   VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
            V+ WG+   G   + + I    P ++ G      + GG     +A    G + TWG  + 
Sbjct: 662  VWTWGWNNSGQLGDGTTINRSTPVQVIGLTDVIAIAGGDY-HTIALKSDGTVWTWG-FNY 719

Query: 81   EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
             GQ  L  G       P  +   A ++  A G+ H +++   G V+ WG+          
Sbjct: 720  YGQ--LGGGATTNRSTPVQVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNG-------- 769

Query: 141  RDFGSAGSFQKDSTGKQSALPTEQAPPSD--KRAGEEV----VKRRKTSSAREESENPAS 194
              +G  G    D +      P + +  +D    AG  +    +K   T  A   +E    
Sbjct: 770  --YGQLG----DGSTTDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQL 823

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
            GD   T S   V ++    +  V A   HT+ L   G VW WG    GQLG GS      
Sbjct: 824  GDGTTTNSSTPVQVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGST----- 878

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                           +R L V+          G + V  IA G  H+  +   GA+  +G
Sbjct: 879  --------------TERSLPVQ--------VIGLTDVIAIAGGYYHTIALKSDGAVWAWG 916

Query: 315  WGLYGQCGHGSTNDQLRP--SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG---GNQ 369
            +    Q G+ ST +   P  S    +  +    +  G   T C+S+   V + G   GN+
Sbjct: 917  YNGNNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITG--STTCVSLS-SVLLNGWVDGNR 973

Query: 370  FGQL---------GTGVDQAENVPKLLETPILESKRAKV--------------------- 399
                         G   D    +P    +  + +    +                     
Sbjct: 974  AATTAWFDYGTSSGVYFDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQNSRGISYG 1033

Query: 400  ----------VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
                      +S GA H+  L  DG V + G N  GQLG G +I+R+ P  V + G    
Sbjct: 1034 SETIFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTP--VQVSGLTDV 1091

Query: 450  -NIACGWWHTLLL 461
              IA G +HT+ L
Sbjct: 1092 IAIAGGDYHTIAL 1104


>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
           aries]
          Length = 1137

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 139/297 (46%), Gaps = 49/297 (16%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+  VA G  HTL+L+  G+V+  G   EGQLGLG          I    +
Sbjct: 106 CIKALKPE-KVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTS 164

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   +                 I+
Sbjct: 165 QHKIKQL--SAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNMCVPHQVTVGKPISWIS 222

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGH------GSTNDQLRPSYASSLMDIQVEQIAAG 349
           CG  HSA VT  G L TFG    G+ G            QL P  +  ++     Q+A G
Sbjct: 223 CGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVI-----QVACG 277

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
             HTV ++ E  VY FG  QFGQLG G    E + PK++E+  ++ K+   V CG  H+A
Sbjct: 278 GGHTVVLT-EKAVYTFGLGQFGQLGLGTFTFETSEPKVIES--VKDKKISHVCCGENHTA 334

Query: 409 VLTEDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           ++TE G + ++G  ++G+LGLG  +  ++ +P+L      ++   +ACG  H L+ A
Sbjct: 335 LITESGLLYTFGDGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACGGCHMLVFA 391



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+A+ T    L  FG   +GQ G GS     +P+   +L   +V+ +A G  HT
Sbjct: 66  LSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHT 125

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           + ++  G+VY  GGN  GQLG G D  E     L +      + K +S G+  SA LTED
Sbjct: 126 LVLTGGGKVYATGGNNEGQLGLG-DTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTED 184

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V + G     I+CG++H+  + 
Sbjct: 185 GELFMWGDNSEGQIGLQNITNMCVPHQVTV-GKPISWISCGYYHSAFVT 232



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 36/252 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           ++ G  HT I +   +++ +G    GQLGLGS+   V  P  I  L        +P    
Sbjct: 66  LSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKA-TVNKPTCIKAL--------KP---- 112

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         VK +ACG  H+ V+T  G +   G    GQ G G T D+    +  
Sbjct: 113 ------------EKVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDT-DERSAFHLI 159

Query: 337 SLMDIQ--VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL-LETPILE 393
           S    Q  ++Q++AG   +  ++ +G ++++G N  GQ+G      +N+  + +   +  
Sbjct: 160 SFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIG-----LQNITNMCVPHQVTV 214

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS--IDRNIPSLVPIHGFLPRNI 451
            K    +SCG  HSA +T +G++ ++G  + G+LGL     ++  +P LVP        +
Sbjct: 215 GKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQV 274

Query: 452 ACGWWHTLLLAE 463
           ACG  HT++L E
Sbjct: 275 ACGGGHTVVLTE 286


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 113/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLG  +    V  P LI              
Sbjct: 87  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIK------------- 133

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 134 -----------KLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASP 182

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   +     P      +L
Sbjct: 183 QRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSP--CHVKLL 240

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G   +GQLG     D   P  ++ + G     I
Sbjct: 241 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQI 300

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 301 ACGRQHTL 308



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 160/378 (42%), Gaps = 76/378 (20%)

Query: 25  WGY----LPG--TSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
           WGY     PG  +S  +  +  P         S K+V CGG     L   E G++ T G 
Sbjct: 4   WGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLL--EDGEVYTCG- 60

Query: 78  ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
            + +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG        
Sbjct: 61  LNTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGA------- 111

Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
                 GS G     +T    A+P        K+  ++++   + S         A+  +
Sbjct: 112 ------GSDGQLGHTTTEDSVAIPR-----LIKKLNQQMI--LQVSCGNWHCMALAADGQ 158

Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
           FFT                   SP  V    G+ + +VAAGG H+  LS  G V+GWG  
Sbjct: 159 FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRN 218

Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
             GQLGL        T    PC  H        LL  Q  V             I+CG  
Sbjct: 219 NAGQLGLSDE-----TDRQSPC--HVK------LLRTQKVV------------YISCGEE 253

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISV 358
           H+AV+T +G + TFG G +GQ GH S ND++ P     LM  +V QIA G  HT+  +  
Sbjct: 254 HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS 313

Query: 359 EGRVYVFGGNQFGQLGTG 376
            G +Y FG    GQLGTG
Sbjct: 314 SGLIYAFGCGARGQLGTG 331



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 121/258 (46%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 76

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ GH +T D +  P
Sbjct: 77  -------EQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIP 129

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N+ GQLG G +  ++  P+ +++  
Sbjct: 130 RLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKS-- 187

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 188 LEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQ----SPCHVKLLRTQ 243

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 244 KVVYISCGEEHTAVLTKS 261



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 110/278 (39%), Gaps = 31/278 (11%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG   +LA S+ G+L +WG+  D    + T+      P       +  +++ + G  HC
Sbjct: 91  ACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHC 150

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +++   G+ +TWG         + ++F S  S Q+        +P  Q       +    
Sbjct: 151 MALAADGQFFTWGQNRH-GQLGLGKEFPSQASPQR--VKSLEGIPLAQVAAGGAHSFALS 207

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           +        R  +      DE    SPC V L    K+  ++ G  HT +L+  G V+ +
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G  GQLG  S    V                 R +L   G          S V +IAC
Sbjct: 268 GAGSFGQLGHDSMNDEV---------------NPRRVLELMG----------SEVTQIAC 302

Query: 297 GGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           G +H+ A V  +G +  FG G  GQ G G T +   PS
Sbjct: 303 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPS 340



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   G  G  S+N Q     P     + D  ++++A G  H++ +  +G VY  G
Sbjct: 1   MLCWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG 60

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 61  LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQ 116

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LG   + D   IP L+  ++  +   ++CG WH + LA   Q 
Sbjct: 117 LGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQF 159


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         ++  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V EIACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 158/380 (41%), Gaps = 81/380 (21%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGG-CGFALATSESGKLITWGS 77
           WGY     P     L  I A  + CG  S + V    CGG  C F L   E G++ T G 
Sbjct: 4   WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLL---EDGEVYTCG- 59

Query: 78  ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
            + +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG        
Sbjct: 60  LNTKGQ--LGHEREGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGA------- 110

Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
                 GS G     +T    A+P        ++  ++ +   + S         A+  +
Sbjct: 111 ------GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALATDGQ 157

Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
           FFT                   SP  V    G+ + +VAAGG H+  LS  G V+GWG  
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217

Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACG 297
             GQLGL                      KDR  P  V+              V  I+CG
Sbjct: 218 NAGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCG 250

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-I 356
             H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310

Query: 357 SVEGRVYVFGGNQFGQLGTG 376
              G +Y FG    GQLGTG
Sbjct: 311 PSSGLIYAFGCGARGQLGTG 330



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 117/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H + L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NQP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 111/278 (39%), Gaps = 31/278 (11%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG   +LA S+ G+L +WG+  D     +T+      P       + ++++ + G  HC
Sbjct: 90  ACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +++   G+ +TWG +       + ++F S  S Q+        +P  Q       +    
Sbjct: 150 LALATDGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGAHSFALS 206

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           +           +      DE    SPC V L    K+  ++ G  HT +L+  G V+ +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G  GQLG  S    V                 R +L   G          S V +IAC
Sbjct: 267 GAGSCGQLGHDSMNDEV---------------NPRRVLELMG----------SEVTQIAC 301

Query: 297 GGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           G +H+ A V  +G +  FG G  GQ G G T +   PS
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPS 339



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 18/167 (10%)

Query: 310 LLTFGWGLYGQCGHGSTNDQLR-----PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
           +L +G+   GQ G G+    LR     P     + D  V+++A G  H V +  +G VY 
Sbjct: 1   MLCWGYWSLGQPGIGT---HLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYT 57

Query: 365 FGGNQFGQLGTGV--DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
            G N  GQLG     +Q E +  L +  I+       V+CG  HS  L++ GQ+ SWG  
Sbjct: 58  CGLNTKGQLGHEREGNQPEQIGALADQHIIH------VACGESHSLALSDQGQLFSWGAG 111

Query: 423 KYGQLGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
             GQLGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 112 SDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQF 158


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 172/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V  + F 
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF- 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 172/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V  + F 
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF- 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 167/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 116/254 (45%), Gaps = 28/254 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTLLLAETT 465
           ACG  HTL    ++
Sbjct: 300 ACGRQHTLAFVPSS 313



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 159/383 (41%), Gaps = 81/383 (21%)

Query: 22  VYMWGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITW 75
           +  WGY     P  S  L  I A  ++CG  S + V    CGG    ++   E G++ T 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGN--HSVFLLEDGEVYTC 58

Query: 76  GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
           G  + +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG      
Sbjct: 59  G-LNTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------ 109

Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENP 192
                            S G+   + TE +   P   ++  ++ +   + S         
Sbjct: 110 ---------------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLAL 152

Query: 193 ASGDEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
           A+  +FFT                   SP  V    G+ + +VAAGG H+  LS  G V+
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
           GWG    GQLGL          H+              LL  Q             V  I
Sbjct: 213 GWGMNNAGQLGLSDEKDRESPCHV-------------KLLRTQ------------KVVYI 247

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           +CG  H+AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+
Sbjct: 248 SCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTL 307

Query: 355 C-ISVEGRVYVFGGNQFGQLGTG 376
             +   G +Y FG    GQLGTG
Sbjct: 308 AFVPSSGLIYAFGCGARGQLGTG 330



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKPE 76

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
            +        G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 77  QI--------GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPGI-STNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 124/268 (46%), Gaps = 36/268 (13%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L TL+    +  V+ G  H+L +   G+V+ WG   EGQLG+G   +    P  I  L
Sbjct: 70  PALETLH----VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                  AG   + ++ACG  HS  +++ G + ++G   +GQ G
Sbjct: 126 -----------------------AGIKII-QVACGHYHSVALSEDGQVFSWGTNSHGQLG 161

Query: 323 HGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G     Q  P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        
Sbjct: 162 LGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLALS---GN 218

Query: 382 NVPKLLETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           N P     P+    L++     +SCG +H+AVLT+DG+V ++G N YGQLG   + ++  
Sbjct: 219 NAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG 278

Query: 438 PSLVPIHGFLPRNIACGWWHTLLLAETT 465
           P LV     L   I CG  HTL    TT
Sbjct: 279 PQLVERIEGLVSQIDCGSDHTLAYIYTT 306



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T  P  +    G+KI +VA G  H++ LS+ GQV+ WG    GQLGLG       +P  +
Sbjct: 116 TFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW---- 315
             LE        PL                   ++A GG HS  ++ +G   +FGW    
Sbjct: 176 RSLEGI------PL------------------AQVAAGGHHSFALSLSGT--SFGWGSNN 209

Query: 316 -GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G     G+ +   + +P    +L  + V  I+ G  HT  ++ +G+V+ FG N +GQLG
Sbjct: 210 AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E   +E   ++ + CG+ H+ A +   GQV+S+G
Sbjct: 270 HDPTAEKRGPQLVER--IEGLVSQ-IDCGSDHTLAYIYTTGQVVSFG 313



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 135/343 (39%), Gaps = 98/343 (28%)

Query: 30  GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
           G  PE+ P L  +   L  CG +            +LA    G++  WG+A  EGQ  L 
Sbjct: 63  GEQPERIPALETLHVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108

Query: 88  SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
            G+  ET   P+         +++ A G  H V+++E G+V++WG          T   G
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG----------TNSHG 158

Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
             G       GK+   P+ QA P   R+ E                              
Sbjct: 159 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 179

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
                 G+ + +VAAGG H+  LS  G  +GWG    GQL L                  
Sbjct: 180 ------GIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLAL------------------ 215

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
             SG + P  V++    S G      V  I+CG +H+AV+T  G + TFG   YGQ GH 
Sbjct: 216 --SGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFG 366
            T ++  P     +  + V QI  G  HT+  I   G+V  FG
Sbjct: 272 PTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 9/165 (5%)

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
           +G  RPL  RQ        AG + + + A G  HS ++   G + + G    GQ G   T
Sbjct: 7   AGGPRPLRERQVC------AGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGT 60

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPK 385
               +P    +L  + V  ++ G  H++ +  +GRV+ +G    GQLG G   +   +PK
Sbjct: 61  PRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPK 120

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            ++T  L   +   V+CG  HS  L+EDGQV SWG N +GQLGLG
Sbjct: 121 KIKT--LAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG 163



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 6/126 (4%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCG 403
           Q A+G  H++ +  +G V   G N  GQLG  G  + E   ++   P LE+    +VSCG
Sbjct: 27  QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI---PALETLHVALVSCG 83

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLVP-IHGFLPRNIACGWWHTLLL 461
             HS  +   G+V +WG    GQLG+G+  +   IP  +  + G     +ACG +H++ L
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVAL 143

Query: 462 AETTQI 467
           +E  Q+
Sbjct: 144 SEDGQV 149


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 131/290 (45%), Gaps = 35/290 (12%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------ 264
             +   +VA G +    ++  G+V+  G    G+LGLG     VP P  +  L        
Sbjct: 1826 ALNAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKV 1885

Query: 265  --AASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
               + G+    L   G V S      GK G                    +++IACG  H
Sbjct: 1886 AVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSH 1945

Query: 301  SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
            SA +T +G L T+G G YG+ GHG    QL+P     L+  +V Q+A G     T+ ++ 
Sbjct: 1946 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTD 2005

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            EG V+ +G   FG+LG G  +  NVP+ +E   L  +    + CGA+ S  LT+ G V +
Sbjct: 2006 EGLVFSWGDGDFGKLGRGGSEGCNVPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 2063

Query: 419  WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            WG   Y +LG G  +    P +V  + G    ++A G  H L + +  Q+
Sbjct: 2064 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQV 2113



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR                    D+
Sbjct: 1882 VKKVAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNC-----------------DK 1924

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K+ R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 1925 PRLIE------ALKSRR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 1976

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  NV      
Sbjct: 1977 PKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIER 2036

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 2037 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 2094

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 2095 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 2154

Query: 457  HTL 459
            H++
Sbjct: 2155 HSV 2157



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 139/354 (39%), Gaps = 79/354 (22%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V   +G  HC++++  GEVY+WG  E                      G  +  P ++  
Sbjct: 2878 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGNRSPCDRPR 2919

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASG---------------DEFFTLSPCLVTLNPG 211
              +   G EVV       A       A G               D    L P LV    G
Sbjct: 2920 VIESLRGIEVVDV-AAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 2978

Query: 212  VKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
             ++  VA  +G   TL L++   VW WG G  G+LG G                  + G 
Sbjct: 2979 HRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRG-----------------GSDGC 3021

Query: 270  DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
              P+ V           G   VK + CG + S  +T +GA+ T+G G Y + GHGS +  
Sbjct: 3022 KVPMKV-------DALTGLGAVK-VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 3073

Query: 330  LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
             RP     L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+  
Sbjct: 3074 RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 3133

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
              L+ K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 3134 --LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 3169



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 149/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 1833 AGGSKSLFAVTVEGKVYACGEATNGRLGLGVSS--GTVPVPRQVTALSSYVVKKVAVHSG 1890

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   ++      A
Sbjct: 1891 GRHATALTADGKVFSWG----------EGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIA 1940

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 1941 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQT 2000

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 2001 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNVPQNIER--LNGQG 2041

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 2042 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 2095

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 2096 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 2153

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 2154 SHSVAWT 2160



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G V+GWG+   GQLG   G+++K VPTP    C   AA    RP  +  G     +V + 
Sbjct: 2788 GTVYGWGHNHRGQLGGVEGAKVK-VPTP----CEALAAL---RPAQLIGGEQTLFAVTAD 2839

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 2840 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 2899

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 2900 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRL 2959

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   V+CG+    +  LTED  V SWG   YG+LG G 
Sbjct: 2960 GHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGG 3017

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  V  + G     + CG   ++ L ++
Sbjct: 3018 SDGCKVPMKVDALTGLGAVKVECGSQFSVALTKS 3051



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 11/202 (5%)

Query: 272  PLLVRQGSVNSSGKA-GRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTND 328
            P L          KA G S +++ A G   +A +        F WGL    Q G    + 
Sbjct: 1759 PFLASDNEEEEDEKASGGSLIRKKAAGLESAATIRTK----VFVWGLNDKDQLGGLKGSK 1814

Query: 329  QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
               PS++ +L  +   Q+A G      ++VEG+VY  G    G+LG GV     VP   +
Sbjct: 1815 IKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSG-TVPVPRQ 1873

Query: 389  TPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHG 445
               L S   K V+   G RH+  LT DG+V SWG    G+LG     + + P L+  +  
Sbjct: 1874 VTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKS 1933

Query: 446  FLPRNIACGWWHTLLLAETTQI 467
               R+IACG  H+  L  + ++
Sbjct: 1934 RRIRDIACGSSHSAALTSSGEL 1955



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 3041 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3099

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 3100 CTEDGEVYTWG 3110


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 123/259 (47%), Gaps = 38/259 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ + K+A G  HT I++  GQ++ +G G  G LG G                    G  
Sbjct: 365 GISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGD-----------------TQGTT 407

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA----------GALLTFGWGLYGQ 320
           RP  V             S VK +ACG  H+A + +             L T+G    G+
Sbjct: 408 RPKEVEY--------LKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGK 459

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GH     +L P+   SL D    Q++ G+  TV +S+ G V+  G +  GQLG      
Sbjct: 460 LGHADKKMKLIPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADG 519

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
             V  +    +L+++  + +S G+ H AVLT +G+V +WG  K GQLGLGD ++R+ P+L
Sbjct: 520 RTVCAV--EGLLKTEFVRHISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTL 577

Query: 441 V-PIHGFLPRNIACGWWHT 458
           V  + G    +I+CG+ +T
Sbjct: 578 VDALEGRQVESISCGYNYT 596



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 121/274 (44%), Gaps = 39/274 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P LV     + +  +A G  H  I++  G+V+ WG    G +G    IK+          
Sbjct: 252 PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKV---------- 301

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY-GQC 321
                   RP LV   SV S       +VK +A G +H+  VT +G L  +G G + GQ 
Sbjct: 302 -------SRPKLVE--SVAS------LHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQL 346

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
              + N        S L  I V +IA G WHT  I+  G++Y +G   FG LG G  Q  
Sbjct: 347 DCYANNLWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGT 406

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTE----------DGQVLSWGWNKYGQLGLGD 431
             PK  E   L+  R K V+CG  H+A + E            ++ +WG    G+LG  D
Sbjct: 407 TRPK--EVEYLKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHAD 464

Query: 432 SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
              + IP+ V  +  +    ++CG   T++L+ T
Sbjct: 465 KKMKLIPTCVDSLTDYDFIQVSCGMALTVVLSIT 498



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 16/206 (7%)

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           L++  + K  P+LV   ++          V+ IACG  H+A++T  G + ++G    G  
Sbjct: 242 LDYDDTSKSLPMLVDSTNMLD--------VQSIACGETHAAIITKQGEVYSWGNESSGGI 293

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG-GNQFGQLGTGVDQA 380
           G+       RP    S+  + V+ +A G  H   ++V G ++ +G G   GQL      A
Sbjct: 294 GNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQLDC---YA 350

Query: 381 ENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
            N+  P  L +P L+      ++CG  H+A++T  GQ+ ++G   +G LG GD+     P
Sbjct: 351 NNLWFPHKLFSP-LDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRP 409

Query: 439 SLVP-IHGFLPRNIACGWWHTLLLAE 463
             V  + G   + +ACG WHT  + E
Sbjct: 410 KEVEYLKGSRVKCVACGPWHTAAIVE 435



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 9/160 (5%)

Query: 313 FGWG-LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           F WG  +G         +  P    S   + V+ IA G  H   I+ +G VY +G    G
Sbjct: 232 FFWGDAFGSILDYDDTSKSLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSG 291

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            +G  V+   + PKL+E+  + S   K V+ G++H+  +T  G++  WG   +  +G  D
Sbjct: 292 GIGNQVNIKVSRPKLVES--VASLHVKAVAYGSKHACAVTVSGELFEWGEGPH--MGQLD 347

Query: 432 SIDRNI----PSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
               N+        P+ G     IACG WHT ++  + Q+
Sbjct: 348 CYANNLWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQL 387



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 120/316 (37%), Gaps = 53/316 (16%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   A A + SG+L  WG     GQ    +       + F      SVVK A G  H   
Sbjct: 321 GSKHACAVTVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAI 380

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG--------KQSALPTEQAPPSDK 170
           +T +G++YT+G             FG  G      T         K S +      P   
Sbjct: 381 ITSSGQLYTYG----------DGTFGVLGHGDTQGTTRPKEVEYLKGSRVKCVACGPWHT 430

Query: 171 RAGEEVVKRRKTSSARE--------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
            A  EV+   K++S R         +       D+   L P  V         +V+ G  
Sbjct: 431 AAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGMA 490

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            T++LS  G V+  G    GQLG          PH        A G  R +   +G + +
Sbjct: 491 LTVVLSITGVVFTIGSSMHGQLG---------NPH--------ADG--RTVCAVEGLLKT 531

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                  +V+ I+ G  H AV+T  G + T+G G  GQ G G   ++  P+   +L   Q
Sbjct: 532 E------FVRHISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQ 585

Query: 343 VEQIAAGLWHT--VCI 356
           VE I+ G  +T  VC+
Sbjct: 586 VESISCGYNYTAAVCL 601


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 115/248 (46%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +  + V  P LI              
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 158/375 (42%), Gaps = 71/375 (18%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  +V  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T +  A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEESVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           QLGL                E   S     LL  Q  V             I+CG  H+A
Sbjct: 221 QLGLSDE-------------EDRESPCHVKLLRAQKVV------------YISCGEEHTA 255

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGR 361
           V+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   G 
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 362 VYVFGGNQFGQLGTG 376
           +Y FG    GQLGTG
Sbjct: 316 IYAFGCGARGQLGTG 330



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 117/254 (46%), Gaps = 32/254 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T + +  P
Sbjct: 76  -------EQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRN 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR  P  V  +       
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVY 246

Query: 451 IACGWWHTLLLAET 464
           I+CG  HT +L ++
Sbjct: 247 ISCGEEHTAVLTKS 260



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + +   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|336088622|ref|NP_001229506.1| secretion regulating guanine nucleotide exchange factor [Apis
           mellifera]
          Length = 381

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 40/273 (14%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           LS C  +L P  KI K+  G  HTLIL D G V+  G+  +GQ+G               
Sbjct: 33  LSKC--SLEPQ-KIKKIIGGAGHTLILDDYGCVYSCGWNNKGQVGF-------------- 75

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                 S K+  LL ++      GK     + +IACG   SA +T  G L  +G   +GQ
Sbjct: 76  ------STKEDILLFQK----LKGKLKNKVIVDIACGWDCSAALTIEGTLFVWGSNSFGQ 125

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG---TGV 377
            G    + Q        ++D ++++I+ GL HTV I+ + +V+V G +  GQLG   T  
Sbjct: 126 LGKHPNDLQWTHEPFEVVIDRKIKRISIGLRHTVLITEDYKVFVAGTDNKGQLGLNSTKN 185

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           D++ N   +  T +L     + +SCG  H+  + +DG   ++G NKYGQLG+   I    
Sbjct: 186 DKSLNAVYIF-TEVLTLSNIEHISCGQHHTIAVAKDGNFYAFGDNKYGQLGINTDI---F 241

Query: 438 P-SLVPI-----HGFLPRNIACGWWHTLLLAET 464
           P +L+PI        LP N+  GW H ++L   
Sbjct: 242 PKTLIPIKLSDFQFKLPFNLYSGWSHVIVLKNN 274



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 162/399 (40%), Gaps = 79/399 (19%)

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA----------AGWAHCVS 118
           S  LI+WG A+  GQ        G   E   LP E  + K +           G  H + 
Sbjct: 2   SYSLISWG-ANSHGQL-----GQGFRSEECVLPCEVDLSKCSLEPQKIKKIIGGAGHTLI 55

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG---EE 175
           + + G VY+ GW         T++      FQK     ++ +  + A   D  A    E 
Sbjct: 56  LDDYGCVYSCGWNNKGQVGFSTKE--DILLFQKLKGKLKNKVIVDIACGWDCSAALTIEG 113

Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
            +    ++S  +  ++P   D  +T  P  V ++   KI +++ G RHT+++++  +V+ 
Sbjct: 114 TLFVWGSNSFGQLGKHP--NDLQWTHEPFEVVIDR--KIKRISIGLRHTVLITEDYKVFV 169

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
            G   +GQLGL S                  +  D+ L         +     S ++ I+
Sbjct: 170 AGTDNKGQLGLNS------------------TKNDKSL---NAVYIFTEVLTLSNIEHIS 208

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL----- 350
           CG  H+  V   G    FG   YGQ G    N  + P    +L+ I++      L     
Sbjct: 209 CGQHHTIAVAKDGNFYAFGDNKYGQLG---INTDIFPK---TLIPIKLSDFQFKLPFNLY 262

Query: 351 --WHTVCISVEGRVYVFGGNQFGQLGTG---------VDQAENVPKLLETPILESKRAKV 399
             W  V +     ++ +G N +GQLG             Q EN+PK+ +           
Sbjct: 263 SGWSHVIVLKNNYIFGWGRNTYGQLGIAQLEKSSTWKAIQLENIPKIYQ----------- 311

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           VS G+ H+  LTE+G++L WGWN++G  G G + D   P
Sbjct: 312 VSVGSEHNVALTENGKILCWGWNEHGNCGNGHTKDVKFP 350


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 107/182 (58%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 168 KKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 227

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 228 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVVNIACGQMC 286

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  + ++G+V  WG+N  GQLGLG S +++ P  +  + G   + +ACG+ HTL+L +  
Sbjct: 287 SVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEG 346

Query: 466 QI 467
           Q+
Sbjct: 347 QV 348



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 210 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 268

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 269 TGCLQNKV------------------------VVNIACGQMCSVAVVDNGEVYVWGYNGN 304

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I V+++A G  HT+ ++ EG+VYV+G N +GQLGTG  
Sbjct: 305 GQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNK 364

Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP+ +E  R  ++ +C + H SA  T+ G V  WG
Sbjct: 365 SNQSYP----TPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 405



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 122/252 (48%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI   + G G H ++ +  G+++ WG+    QLG G+     
Sbjct: 151 GDIQSTIEPRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGT----- 205

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 206 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 245

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   +V +   G VYV+G N  G
Sbjct: 246 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNG 305

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G    ++ P       L+    + V+CG  H+ VLT++GQV  WG N YGQLG G+
Sbjct: 306 QLGLGSSGNQSTP--CRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGN 363

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 364 KSNQSYPTPVAV 375



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 4/161 (2%)

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVCISVEGRVYVFGGN 368
           +   G    G  G G     + P    SL   ++   + G   H +  + EG ++ +G N
Sbjct: 137 IFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHN 196

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            + QLG G      VP  + T  L +K+   V+CG+ HS VLT DG+V +WG+N  GQ+G
Sbjct: 197 AYSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 255

Query: 429 LGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
            G + ++ IP  V   +   +  NIACG   ++ + +  ++
Sbjct: 256 SGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEV 296



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 96/235 (40%), Gaps = 42/235 (17%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 159 PRRLDSLSGKKIACFSYGSGPHVILATTE-GEIFTWG---HNAYSQLGNGTTNHGLVPCH 214

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG             + ++G     ST  
Sbjct: 215 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 261

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
           Q  +P         +    +   +  S A  ++                 +SG++    +
Sbjct: 262 Q-PIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQS---T 317

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
           PC +    G+ + +VA G  HTL+L+D GQV+ WG    GQLG G++     PTP
Sbjct: 318 PCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSYPTP 372



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 22/172 (12%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A  ++G++  WG  
Sbjct: 243 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWG-Y 301

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           +  GQ  L S  +  TP          V + A G+AH + +T+ G+VY WG         
Sbjct: 302 NGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWG--------- 352

Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
                  A S+ +  TG +S  + PT  A   D+           TS+A+ +
Sbjct: 353 -------ANSYGQLGTGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSAAKTQ 397


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 165 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 211

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 212 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 260

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 261 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESP--CHVKLL 318

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 319 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 378

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 379 ACGRQHTL 386



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 157/375 (41%), Gaps = 71/375 (18%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 83  WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 141

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  +V  A G +H +++++ G++++WG           
Sbjct: 142 KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 189

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 190 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 239

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 240 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 299

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           QLGL                E   S     LL  Q  V             I+CG  H+A
Sbjct: 300 QLGLSDE-------------EDRESPCHVKLLRTQKVV------------YISCGEEHTA 334

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGR 361
           V+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   G 
Sbjct: 335 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 394

Query: 362 VYVFGGNQFGQLGTG 376
           +Y FG    GQLGTG
Sbjct: 395 IYAFGCGARGQLGTG 409



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 154

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 155 -------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 207

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 208 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 265

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 266 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE----SPCHVKLLRTQ 321

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 322 KVVYISCGEEHTAVLTKS 339



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 80  MLCWGYWSLGQPGI-STNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 138

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 139 LNTKGQLGH--EREGNKPE--QIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 194

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 195 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 237


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 159/377 (42%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  SP L  + A  ++CG  S + V    CG   ++   E G++ T G A+ 
Sbjct: 4   WGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-ANT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  +V  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +V AGG H+  LS  G V+GWG    G
Sbjct: 161 WGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 113/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+ AG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 121/262 (46%), Gaps = 48/262 (18%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGANTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD---QA--ENVPKLL 387
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +   QA  + V  L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
             P+     A+VV+ GA HS  L+  G V  WG N  GQLGL D  DR      P H  L
Sbjct: 189 GIPL-----AQVVAGGA-HSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKL 238

Query: 448 PRN-----IACGWWHTLLLAET 464
            R      I+CG  HT +L ++
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKS 260



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 6/138 (4%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P     + D  V+++A G  H+V +  +G VY  G N  GQLG   ++  N P+  +   
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGH--EREGNKPE--QIGA 80

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLV-PIHGFLPR 449
           L  +    V+CG  HS  L++ GQ+ SWG    GQLGL  + D   +P L+  ++     
Sbjct: 81  LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 450 NIACGWWHTLLLAETTQI 467
            ++CG WH L LA   Q 
Sbjct: 141 QVSCGNWHCLALAADGQF 158


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 157/375 (41%), Gaps = 71/375 (18%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  +V  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           QLGL                E   S     LL  Q  V             I+CG  H+A
Sbjct: 221 QLGLSDE-------------EDRESPCHVKLLRTQKVV------------YISCGEEHTA 255

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGR 361
           V+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   G 
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 362 VYVFGGNQFGQLGTG 376
           +Y FG    GQLGTG
Sbjct: 316 IYAFGCGAKGQLGTG 330



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ-AENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
 gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
          Length = 611

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 128/295 (43%), Gaps = 40/295 (13%)

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL----- 262
           +N    +  VA G   T IL + G V+  GY   GQ  +G+  + VP+    P L     
Sbjct: 62  INDTKHVVDVACGNEQTTILFENGDVFTCGYNDSGQCAIGT-TERVPSLRFSPGLSSHHT 120

Query: 263 ---------EHAASGKDRPLLVRQGSVNSSGKAGR-----------------SYVKEIAC 296
                    EH A+      L   G  N  G+ G                    V ++AC
Sbjct: 121 VRLFSGNGSEHLAALCANGFLYTVG-FNMRGQLGLGTATTVTEATLVEELAGKRVVDVAC 179

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
              H+A+V D G L   G   YGQ G G  +  L P          V  +A G  +TV  
Sbjct: 180 SYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVAS 239

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET---PILESKRAKVVSCGARHSAVLTED 413
             +G V  FG N  GQLG  +D+    P LL T   P L+      +SCG  H+A++TED
Sbjct: 240 LRDGGVVAFGKNDHGQLG--LDRVSE-PVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTED 296

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           G V ++G N YGQLGLG  +    P+ V  +       +ACG +HTL L++  ++
Sbjct: 297 GAVYTFGRNDYGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLALSDDGKV 351



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 119/256 (46%), Gaps = 31/256 (12%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G ++  VA    HT I+ D G +   G    GQLG+G       + HL+P          
Sbjct: 171 GKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGDH-----SGHLVP---------- 215

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ- 329
           RP+              R  V  +ACG  ++      G ++ FG   +GQ G    ++  
Sbjct: 216 RPV----------DYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPV 265

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           L P+  +  +D   V Q++ G  HT  ++ +G VY FG N +GQLG G       P  +E
Sbjct: 266 LLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVE 325

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
           +  L   R   V+CG  H+  L++DG+V  +G N +GQLGL  S+D   P L  I     
Sbjct: 326 S--LSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQLGLETSMDCLSPQL--ISTLRN 381

Query: 449 RNIACGWWHTLLLAET 464
           + +A G++H++ L  T
Sbjct: 382 KPVAAGFYHSVCLVGT 397



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 8/160 (5%)

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYAS--SLMDIQ-VEQIAAGLWHTVCISVEGRVYVFG 366
           L +FG   YG+   G TND+  P+      + D + V  +A G   T  +   G V+  G
Sbjct: 32  LFSFGQNTYGELALGDTNDRSTPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTCG 91

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKR-AKVVS-CGARHSAVLTEDGQVLSWGWNKY 424
            N  GQ   G    E VP L  +P L S    ++ S  G+ H A L  +G + + G+N  
Sbjct: 92  YNDSGQCAIGT--TERVPSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNMR 149

Query: 425 GQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           GQLGLG +      +LV  + G    ++AC ++HT ++ +
Sbjct: 150 GQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMD 189



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 82/210 (39%), Gaps = 30/210 (14%)

Query: 68  ESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
           ++G L   G  +D GQ  L  G H     P P        V+  A G  + V+    G V
Sbjct: 189 DNGDLHACG-CNDYGQ--LGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGV 245

Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
             +G            D G  G    D   +   LPT  APP D+    ++      ++ 
Sbjct: 246 VAFG----------KNDHGQLG---LDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAI 292

Query: 186 -----------REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
                      R +      G +     P  V     ++IT+VA G  HTL LSD G+V+
Sbjct: 293 VTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLALSDDGKVF 352

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
            +G    GQLGL + +  + +P LI  L +
Sbjct: 353 PFGRNNHGQLGLETSMDCL-SPQLISTLRN 381


>gi|115767093|ref|XP_787316.2| PREDICTED: RCC1 domain-containing protein 1-like
           [Strongylocentrotus purpuratus]
          Length = 371

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 98/191 (51%), Gaps = 27/191 (14%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+EIACG  H+ ++T  G + ++G G  GQ GHG    +  P    ++  + +  I+AG 
Sbjct: 172 VQEIACGKEHALLLTAQGLVYSYGMGSRGQLGHGDIGKEDVPKLLDAIACVPMVTISAGG 231

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD------------------QAENVPKLLETPIL 392
           WH+ CIS  G +Y++G N+ GQLG   D                    + VP +L+ P  
Sbjct: 232 WHSACISAIGDMYIWGWNESGQLGLPPDLESSRTEEGSSHVMADRISFQMVPAVLDLP-- 289

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--- 449
                  VSCG+RH+A ++ D ++ +WGW KYGQLG GD   R+ P LV    FL     
Sbjct: 290 GGVNVSKVSCGSRHTAAVSYDKRLYTWGWGKYGQLGHGDVQSRDSPKLVDF--FLQNRLD 347

Query: 450 --NIACGWWHT 458
             ++ CG W +
Sbjct: 348 VLDVTCGDWSS 358



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           I V++IA G  H + ++ +G VY +G    GQLG G    E+VPKLL+   +       +
Sbjct: 170 IGVQEIACGKEHALLLTAQGLVYSYGMGSRGQLGHGDIGKEDVPKLLDA--IACVPMVTI 227

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
           S G  HSA ++  G +  WGWN+ GQLGL
Sbjct: 228 SAGGWHSACISAIGDMYIWGWNESGQLGL 256



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 17/157 (10%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT----PHL 258
           P L+     V +  ++AGG H+  +S +G ++ WG+   GQLGL   ++   T     H+
Sbjct: 213 PKLLDAIACVPMVTISAGGWHSACISAIGDMYIWGWNESGQLGLPPDLESSRTEEGSSHV 272

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           +   +  +      +L   G VN         V +++CG RH+A V+    L T+GWG Y
Sbjct: 273 MA--DRISFQMVPAVLDLPGGVN---------VSKVSCGSRHTAAVSYDKRLYTWGWGKY 321

Query: 319 GQCGHGSTNDQLRPSYASSLMD--IQVEQIAAGLWHT 353
           GQ GHG    +  P      +   + V  +  G W +
Sbjct: 322 GQLGHGDVQSRDSPKLVDFFLQNRLDVLDVTCGDWSS 358



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 42/155 (27%)

Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           V  +A GW H   ++  G++Y WGW E                        Q  LP +  
Sbjct: 225 VTISAGGW-HSACISAIGDMYIWGWNE----------------------SGQLGLPPDLE 261

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHT 224
                            SS  EE  +    D   F + P ++ L  GV ++KV+ G RHT
Sbjct: 262 -----------------SSRTEEGSSHVMADRISFQMVPAVLDLPGGVNVSKVSCGSRHT 304

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
             +S   +++ WG+G  GQLG G  ++   +P L+
Sbjct: 305 AAVSYDKRLYTWGWGKYGQLGHGD-VQSRDSPKLV 338



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
           +P  +    + ++CG  H+ +LT  G V S+G    GQLG GD    ++P L+     +P
Sbjct: 164 SPFSQPIGVQEIACGKEHALLLTAQGLVYSYGMGSRGQLGHGDIGKEDVPKLLDAIACVP 223

Query: 449 R-NIACGWWHTLLLA 462
              I+ G WH+  ++
Sbjct: 224 MVTISAGGWHSACIS 238


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 183/424 (43%), Gaps = 69/424 (16%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           GG    +A    G    WG  +  GQ  L +G    +  P  +      V+  AG  H +
Sbjct: 352 GGVVHTVALKWDGTAWGWGY-NSAGQ--LGNGTTTNSSIPVQVAALTQAVEIDAGGYHTL 408

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR---AGE 174
           +  + G +Y WG             +G+ G+    S    S++P  Q P S  R   AG 
Sbjct: 409 ARRQDGTLYAWG----------DNFYGALGTGNTTS----SSVPV-QVPLSGVRWFGAGY 453

Query: 175 --EVVKRRKTSSAREES-------ENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRH 223
              V +R+K + A+  +        N   GD   T   SP  V ++    I K A G  H
Sbjct: 454 YYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVVVS---GIVKTAGGSAH 510

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           ++ L   G VW WGY   GQLG G+  ++V    L                         
Sbjct: 511 SVALGAGGAVWTWGYNAYGQLGNGTTTQVVTPTQL------------------------- 545

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              G S V ++A G  H+  ++  G +  +G+  YGQ G+G+T +QL P     L    V
Sbjct: 546 --PGMSGVIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPELDG--V 601

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
             I+AG  HTV +  +G V+ +G N +GQLG G     + P  ++ P LE+  +  ++ G
Sbjct: 602 TAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSP--VQVPSLENVVS--IAAG 657

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
             H+  +  DG +  WG+   GQLGLG + ++++P  V   G     IA G +HT+ L  
Sbjct: 658 HFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGLGHAVA-IAAGGYHTVALLA 716

Query: 464 TTQI 467
             Q+
Sbjct: 717 NGQV 720



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 130/270 (48%), Gaps = 31/270 (11%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPT--PHLIPCLEHAASGK 269
           ++   +AG  H++ +++ G VW WG    GQLG G+  ++ VP   P +   +  AA+G 
Sbjct: 196 QVVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSDVVAVAAAGS 255

Query: 270 DRPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGA 309
               L   G+V     NSSG+ G                S V  IA G  H+  V   G+
Sbjct: 256 RTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVTNIAAGLWHTLAVKKDGS 315

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
             ++G   YGQ G G+T ++LRP   + L  ++   ++ G+ HTV +  +G  + +G N 
Sbjct: 316 AWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVRA--LSGGVVHTVALKWDGTAWGWGYNS 373

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            GQLG G     ++P      +    +A  +  G  H+    +DG + +WG N YG LG 
Sbjct: 374 AGQLGNGTTTNSSIP----VQVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYGALGT 429

Query: 430 GDSIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           G++   ++P  VP+ G   R    G+++++
Sbjct: 430 GNTTSSSVPVQVPLSGV--RWFGAGYYYSV 457



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 167/398 (41%), Gaps = 57/398 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G    L     G L  WG+ +  GQ  L +G+  +   P  +     VV A+AG  H V+
Sbjct: 153 GVYHTLEVKSGGSLWAWGN-NPSGQ--LGNGQRTQRNAPTRVRGLNQVVSASAGAEHSVA 209

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD----KRAGE 174
           VTE G V+TWG          +  +G  G    D T    A+P +    SD      AG 
Sbjct: 210 VTEDGSVWTWG----------SNAYGQLG----DGTNTLRAVPVQVPGMSDVVAVAAAGS 255

Query: 175 EVVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
             V  +   +      N +   GD   T S   + +     +T +AAG  HTL +   G 
Sbjct: 256 RTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVTNIAAGLWHTLAVKKDGS 315

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
            W WG    GQLG G+ +  +                 RP+LV          AG + V+
Sbjct: 316 AWSWGNNAYGQLGDGTTLNRL-----------------RPVLV----------AGLTGVR 348

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            ++ G  H+  +   G    +G+   GQ G+G+T +   P   ++L   Q  +I AG +H
Sbjct: 349 ALSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAALT--QAVEIDAGGYH 406

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK---RAKVVSCGARHSAV 409
           T+    +G +Y +G N +G LGTG   + +VP  ++ P+   +        S   R    
Sbjct: 407 TLARRQDGTLYAWGDNFYGALGTGNTTSSSVP--VQVPLSGVRWFGAGYYYSVAERKKVN 464

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
           + +   + +WG N  G+LG G +  R  P+ V + G +
Sbjct: 465 MAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVVVSGIV 502



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 138/338 (40%), Gaps = 49/338 (14%)

Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           +VK A G AH V++   G V+TWG+            +G  G+         + LP    
Sbjct: 501 IVKTAGGSAHSVALGAGGAVWTWGYNA----------YGQLGNGTTTQVVTPTQLPGMSG 550

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
                      V      +      N      +G     L+P  V    GV  T ++AG 
Sbjct: 551 VIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPELDGV--TAISAGS 608

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
            HT+ L   G VW WG    GQLG G+      +P  +P LE+  S              
Sbjct: 609 THTVALKADGTVWAWGSNLYGQLGDGTFTHR-SSPVQVPSLENVVS-------------- 653

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
                       IA G  H+  V   G L  +G+G  GQ G G+T +Q  P   S L   
Sbjct: 654 ------------IAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGLG-- 699

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
               IAAG +HTV +   G+V+ +G N  GQLG         P L+  P L +  A  ++
Sbjct: 700 HAVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLV--PGLTNVIA--LA 755

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
            G   +AVL  DG V ++G+N  GQLG G +  R+ P+
Sbjct: 756 AGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSPT 793



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 174/441 (39%), Gaps = 64/441 (14%)

Query: 10  ENEKMEECKETVVYMWGYLP------GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA 63
           E +K+   +   ++ WG+        GT+ +++   SP    + G         GG   +
Sbjct: 459 ERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRT---SPTAVVVSG----IVKTAGGSAHS 511

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
           +A    G + TWG  +  GQ  L +G   +   P  LP  + V+  AAG  H V+++  G
Sbjct: 512 VALGAGGAVWTWGY-NAYGQ--LGNGTTTQVVTPTQLPGMSGVIDVAAGVNHTVALSADG 568

Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
            V  WG+            +G  G+    +     ++P      +        V  +   
Sbjct: 569 TVAAWGYNA----------YGQLGNGTTANQLTPQSVPELDGVTAISAGSTHTVALKADG 618

Query: 184 SAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
           +      N     GD  FT     V +     +  +AAG  HT+ +   G +W WGYG +
Sbjct: 619 TVWAWGSNLYGQLGDGTFTHRSSPVQVPSLENVVSIAAGHFHTVAVKGDGTLWVWGYGPQ 678

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           GQLGLG+       P  +  L HA +                          IA GG H+
Sbjct: 679 GQLGLGTTTNQ-SVPVQVSGLGHAVA--------------------------IAAGGYHT 711

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
             +   G + T+G+   GQ G  +   +  P     L +  V  +AAG + T  +  +G 
Sbjct: 712 VALLANGQVWTWGYNSSGQLGDATIIQRYSPVLVPGLTN--VIALAAGGYTTAVLKRDGT 769

Query: 362 VYVFGGNQFGQLGTGVDQAENVPK-LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           V+ FG N  GQLG G   + + P   L   +++      +S G  H   L +D  V + G
Sbjct: 770 VWAFGYNPNGQLGDGTTTSRSSPTATLMNSVVD------LSSGVNHMMGLRKDAWVRACG 823

Query: 421 WNKYGQLGLGDSIDRNIPSLV 441
           +N  GQLG G +  R  P  V
Sbjct: 824 YNSAGQLGDGTTTQRPTPVQV 844



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           ++ G++HT+ +   G ++ +G N  GQLG G     N P    T +    +    S GA 
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAP----TRVRGLNQVVSASAGAE 205

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
           HS  +TEDG V +WG N YGQLG G +  R +P  VP
Sbjct: 206 HSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVP 242


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 132/263 (50%), Gaps = 40/263 (15%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------------E 263
           KVA G  HT+ +++ GQ++ WG   EGQLGL S+  M  +P ++  L            +
Sbjct: 120 KVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMK 179

Query: 264 HAASGKDRPLLVRQGSVNSSGKAG-----RSYVKE-------------IACGGRHSAVVT 305
           HA +  +   L   GS NS G+ G     RS VK              IACGG HS  ++
Sbjct: 180 HALALTNNGELYSWGS-NSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAIS 238

Query: 306 DAGALLTFGWG--LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
            +GA+  FGWG   +GQ G   T ++  P    +L + ++   A G   +V ++V+G V+
Sbjct: 239 KSGAI--FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVF 296

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWGWN 422
             G   +GQLG G +  E +P+  +   L       +SCG RH+ A++   G+V +WG  
Sbjct: 297 TCGAGMYGQLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLG 354

Query: 423 KYGQLGLGDSIDRNIPSLVPIHG 445
             GQ  LG++  R+IP+   +HG
Sbjct: 355 GAGQ--LGNNSTRSIPTPQVVHG 375



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 37/240 (15%)

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC---------LEHAASGKDRPLLV-RQGSV 280
           G ++ WG    G+LGLG     +    L+PC         ++  A G++  +++   G +
Sbjct: 31  GDMFCWGNTRHGELGLGGIEDEII---LVPCQVDFKKASEIQQIACGENYTVVITHDGKI 87

Query: 281 NSSG---------KAGRSYV-----------KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            S G         + GR  +           K++ACG  H+  V + G L ++G    GQ
Sbjct: 88  YSCGNNDYGQLGHERGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQ 147

Query: 321 CGHGSTND-QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD- 378
            G  S N  +  P    +L    + Q+A G+ H + ++  G +Y +G N  GQLG GVD 
Sbjct: 148 LGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDI 207

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           ++E  PKL+ T  L       ++CG  HS  +++ G +  WG N +GQLGL D+ +RN+P
Sbjct: 208 RSEVKPKLINT--LAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLP 265



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 12/162 (7%)

Query: 313 FGWG--LYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           F WG   +G+ G G   D+  L P         +++QIA G  +TV I+ +G++Y  G N
Sbjct: 34  FCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSCGNN 93

Query: 369 QFGQLGTGVDQAENVPKLLETPI-LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
            +GQLG      E   K L+  + L++   K V+CGA H+  + E GQ+ SWG N  GQL
Sbjct: 94  DYGQLG-----HERGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQL 148

Query: 428 GLG-DSIDRNIPSLVPIHGF-LPRNIACGWWHTLLLAETTQI 467
           GL   +     P +V   G  +   +ACG  H L L    ++
Sbjct: 149 GLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGEL 190



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 61/109 (55%), Gaps = 1/109 (0%)

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           +G ++ +G  + G+LG G  + E +    +    ++   + ++CG  ++ V+T DG++ S
Sbjct: 30  KGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYS 89

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
            G N YGQLG  +   + +  ++ +  F+ + +ACG +HT+ + E  Q+
Sbjct: 90  CGNNDYGQLG-HERGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQL 137



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCV 117
           G    +A +E G+L +WGS + EGQ  L S    E +P        + +V+ A G  H +
Sbjct: 124 GAYHTIAVNEWGQLFSWGS-NSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHAL 182

Query: 118 SVTEAGEVYTWG 129
           ++T  GE+Y+WG
Sbjct: 183 ALTNNGELYSWG 194


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         ++  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 111/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARHSAVLT-EDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H++      G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V EIACG +H S  V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 158/375 (42%), Gaps = 71/375 (18%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L  G+ G  PE      +  +V  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHGREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           QLGL                E   S     LL  Q  V             I+CG  H+A
Sbjct: 221 QLGLSDE-------------EDRESPCHVKLLRTQKVV------------YISCGEEHTA 255

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGR 361
           V+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   G 
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 362 VYVFGGNQFGQLGTG 376
           +Y FG    GQLGTG
Sbjct: 316 IYAFGCGARGQLGTG 330



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 42/259 (16%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG G                          
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHG-------------------------- 69

Query: 274 LVRQGSV-NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR- 331
             R+G+     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  
Sbjct: 70  --REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAV 127

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETP 390
           P     L    + Q++ G WH + ++ +G+ + +G N  GQLG G D  ++  P+ + + 
Sbjct: 128 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRS- 186

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN 450
            LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R 
Sbjct: 187 -LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE----SPCHVKLLRT 241

Query: 451 -----IACGWWHTLLLAET 464
                I+CG  HT +L ++
Sbjct: 242 QKVVYISCGEEHTAVLTKS 260



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 82/165 (49%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGV--DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            N  GQLG G   ++ E +  L +  I+       V+CG  HS  L++ GQ+ SWG    
Sbjct: 60  LNTKGQLGHGREGNKPEQIGALADQHIVH------VACGESHSLALSDRGQLFSWGAGSD 113

Query: 425 GQLGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           GQLGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 120/245 (48%), Gaps = 34/245 (13%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + K A G  HTL L+  G+V+  G    GQLG           H  P        + RP 
Sbjct: 36  VMKAALGANHTLFLTKDGKVYSCGSNDYGQLG-----------HDQP--------RKRPQ 76

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTNDQLR 331
           LV       SG    S +  +ACG  HS  ++  G + ++G   YGQ GH  G T  Q+ 
Sbjct: 77  LV-------SGLDAYSIIN-VACGEMHSLALSRWGEVFSWGSDNYGQLGHQLGGTL-QIV 127

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETP 390
           P    SL   QV QIAAG  H+V ++  G ++V+G N FGQLG G +   E+ P  + + 
Sbjct: 128 PKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCS- 186

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPR 449
            L      +++CGA H+  +++ G V  WG N  GQLGL D++ +  P+ L  +     R
Sbjct: 187 -LSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVR 245

Query: 450 NIACG 454
            I+CG
Sbjct: 246 FISCG 250



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 129/345 (37%), Gaps = 92/345 (26%)

Query: 25  WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEG 82
           +G L    P K P       +L  G     +    CG   +LA S  G++ +WGS D+ G
Sbjct: 63  YGQLGHDQPRKRP-------QLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGS-DNYG 114

Query: 83  Q-SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTR 141
           Q  +   G     P+      +  VV+ AAG  H V++T AGE++ WG            
Sbjct: 115 QLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWG----------AN 164

Query: 142 DFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
           DFG          G  +  P E  P +                                 
Sbjct: 165 DFG--------QLGLGTITPYESTPTT--------------------------------- 183

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
               V    G+    +A G  HT  +S  G V+GWG    GQLGL   +           
Sbjct: 184 ----VCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTV----------- 228

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                  K  P  +R            S V+ I+CG   S  +T  G + + G G+YGQ 
Sbjct: 229 ------SKKFPTQLR--------TLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQL 274

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVF 365
           GHG T++++ P     LM   + QI+ G  H++  +   GRVY +
Sbjct: 275 GHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 108/239 (45%), Gaps = 38/239 (15%)

Query: 233 VWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           ++GWG    G+LGLG    + V TP  +   E  +                        V
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKS------------------------V 36

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
            + A G  H+  +T  G + + G   YGQ GH       RP   S L    +  +A G  
Sbjct: 37  MKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRK--RPQLVSGLDAYSIINVACGEM 94

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGV-DQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           H++ +S  G V+ +G + +GQLG  +    + VPKL+++  L   +   ++ G RHS  L
Sbjct: 95  HSLALSRWGEVFSWGSDNYGQLGHQLGGTLQIVPKLIKS--LAKYQVVQIAAGQRHSVAL 152

Query: 411 TEDGQVLSWGWNKYGQLGLG-----DSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           T  G++  WG N +GQLGLG     +S    + SL  I   L   IACG  HT  ++++
Sbjct: 153 TNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFAL---IACGANHTFAVSKS 208



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 152/343 (44%), Gaps = 56/343 (16%)

Query: 90  KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
           +H  TP+        SV+KAA G  H + +T+ G+VY+ G          + D+G  G  
Sbjct: 20  EHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCG----------SNDYGQLG-- 67

Query: 150 QKDSTGKQSALPT--EQAPPSDKRAGE--EVVKRRKTSSAREESENPAS-GDEF---FTL 201
             D   K+  L +  +     +   GE   +   R        S+N    G +      +
Sbjct: 68  -HDQPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQI 126

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
            P L+      ++ ++AAG RH++ L++ G+++ WG    GQLGLG+      TP  +  
Sbjct: 127 VPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCS 186

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYG 319
           L    SG    L                    IACG  H+  V+ +GA+  FGWG  + G
Sbjct: 187 L----SGIPFAL--------------------IACGANHTFAVSKSGAV--FGWGKNING 220

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           Q G   T  +  P+   +L + +V  I+ G   +  ++++G V+  G   +GQLG G   
Sbjct: 221 QLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTS 280

Query: 380 AENVPKLLETPILESKRAKV--VSCGARHS-AVLTEDGQVLSW 419
            E +P+     +LE   + +  +SCG +HS A +   G+V S+
Sbjct: 281 NEILPR----QVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319


>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1279

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 180/436 (41%), Gaps = 67/436 (15%)

Query: 32   SPEKSPIL-----SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL 86
            +P+K  +L     +  P  +  G  +  V  GG  F++  +  G    WG+ +  GQ   
Sbjct: 769  NPDKGNVLGGQHVTITPPTINRGIRFDQVSAGGS-FSIGVASDGNAYAWGN-NKYGQLAQ 826

Query: 87   TSGK--HGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
                    +TP   PLP  A    +  + AAG +H +++   G VY+WG  +       T
Sbjct: 827  KPADVSMQKTPVRIPLPDGADSSFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGT 886

Query: 141  RDFGSAGSFQKDSTGK-------QSALPTEQAPPSDKRA---GEEVVKRRKTSSAREESE 190
                      KD+ G+        + +    A  S+ R    G E   + +T +     +
Sbjct: 887  TTDRYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRK 946

Query: 191  NPASGDEFFTLSPCLVTLNPG--VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
            NP         +P     NPG  +   +V+      + L   G V+ WGY   GQLG G+
Sbjct: 947  NP---------TPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNTNGQLGNGT 997

Query: 249  R--IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
                     P  +P     AS                         +I+ G  H+  +  
Sbjct: 998  SDSTSYASNPARLPSQSFQAS-------------------------QISAGSWHALAIDT 1032

Query: 307  AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD----IQVEQIAAGLWHTVCISVEGRV 362
             G   T+G+  YGQ G GST+D+ +P    +  D    ++  QI+AG+ H++ +  +G +
Sbjct: 1033 DGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSL 1092

Query: 363  YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV--SCGARHSAVLTEDGQVLSWG 420
            + +G N  GQLG G    +  P  ++ P  +++  K V  S G  HS  + +DG + +WG
Sbjct: 1093 WAWGWNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRSSAGQLHSLAIRQDGNLWAWG 1152

Query: 421  WNKYGQLGLGDSIDRN 436
             N+YGQLG   +  RN
Sbjct: 1153 DNQYGQLGNNQTATRN 1168



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 38/265 (14%)

Query: 215  TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP------HLIPCLEHAAS 267
            T+VAAG  H L +   G V+ WG    GQLG G+   +  P P           ++ +A 
Sbjct: 853  TQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAG 912

Query: 268  GKDRPLLVRQGSVNSSGK--AGRSYVKEIACGGRHSAVVTDA------------------ 307
              D   +  +  V + G    G+      +   ++     D                   
Sbjct: 913  VADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSF 972

Query: 308  -------GALLTFGWGLYGQCGHGSTNDQLRPSYASSL--MDIQVEQIAAGLWHTVCISV 358
                   G + T+G+   GQ G+G+++     S  + L     Q  QI+AG WH + I  
Sbjct: 973  VMALDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAIDT 1032

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK--RAKVVSCGARHSAVLTEDGQV 416
            +G  + +G N +GQLG G    +  P+ ++ P   S+  +A  +S G  HS V+  DG +
Sbjct: 1033 DGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSL 1092

Query: 417  LSWGWNKYGQLGLGDSIDRNIPSLV 441
             +WGWN  GQLG+G+++++  P+ +
Sbjct: 1093 WAWGWNSNGQLGIGNTVNQTKPATI 1117



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 115/279 (41%), Gaps = 37/279 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMV 253
            G +  T++P   T+N G++  +V+AGG  ++ ++  G  + WG    GQL    + + M 
Sbjct: 777  GGQHVTITPP--TINRGIRFDQVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQ 834

Query: 254  PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
             TP  IP  +    G D      Q                +A G  H   +   G + ++
Sbjct: 835  KTPVRIPLPD----GADSSFTYTQ----------------VAAGDSHVLAIGSNGIVYSW 874

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSL--MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
            G   +GQ G G+T D+  P           +  Q++AG+  +  I  E RVY +G    G
Sbjct: 875  GRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSENRVYTWGSESTG 934

Query: 372  QLGTGVDQAENVPKLLETPILESKR------AKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
            +   G   A +  +   TP  +         A  VS        L  DG V +WG+N  G
Sbjct: 935  K---GQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNTNG 991

Query: 426  QLGLGDSIDRNI---PSLVPIHGFLPRNIACGWWHTLLL 461
            QLG G S   +    P+ +P   F    I+ G WH L +
Sbjct: 992  QLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAI 1030



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 11/188 (5%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS----LMDIQVEQI 346
             +++ G  H   V   G L ++G   +GQ G G+T ++  P           D    Q 
Sbjct: 236 FSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQA 295

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK--RAKVVSCGA 404
           +AG   +V +  +G++Y +G N +GQLG     A   P+ +  P         K  + G+
Sbjct: 296 SAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVGS 355

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA----CGW-WHTL 459
            H+  L  DG + SWG N + QLG G + +R+ P  V +   +P   A     GW WH+L
Sbjct: 356 LHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMSGWGWHSL 415

Query: 460 LLAETTQI 467
            L     I
Sbjct: 416 ALGSDNWI 423



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 158/414 (38%), Gaps = 60/414 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV------VKAAAG 112
           G G  LA +  G L +WGS +D GQ  L  G   E  EP P+     V      V+A+AG
Sbjct: 242 GRGHILAVASDGNLYSWGS-NDHGQ--LGDGTTAERHEPVPVKKPQGVSQDFTWVQASAG 298

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           +   V +   G++Y+WG             +G  G+    +      +   Q  PS    
Sbjct: 299 YLFSVGLGSDGKLYSWG----------DNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTW 348

Query: 173 GEEVVKRRKT----------SSAREESENPASGDEFFTLSPCLVTLNPGVKI----TKVA 218
            +E V               S    +      G      +P  V +  GV       +++
Sbjct: 349 KQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMS 408

Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             G H+L L     ++GWG    G++G GS      TP  I      A+ +  P     G
Sbjct: 409 GWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRI------ATPQGVPSNFTWG 462

Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS- 337
                         +   G  +S  +   G + T+G+G  G  G+GST D   P+ A   
Sbjct: 463 --------------QFQMGDYYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKP 508

Query: 338 ---LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
              L +   +Q++     ++ I  +G +Y +G N  GQLG       N P  +  P    
Sbjct: 509 NGVLPNFSWKQVSLLSVASLAIGSDGNLYSWGANNNGQLGDNTTTQRNTPIRVAAPQNAP 568

Query: 395 KRAKVVSCGA---RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG 445
                V   A    +S  L  DG + SWG N  GQLG   + DR+IP  V + G
Sbjct: 569 TGLTWVQASAGWDNNSFGLASDGNLYSWGKNANGQLGDNTTNDRHIPGRVNMPG 622



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 103/260 (39%), Gaps = 32/260 (12%)

Query: 206 VTLNP----GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           VTL P    G++ ++V+AG  H L ++  G ++ WG    GQLG G+  +          
Sbjct: 224 VTLTPPGPRGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAE---------- 273

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
             H      +P  V Q        AG  Y+  +  G          G L ++G   YGQ 
Sbjct: 274 -RHEPVPVKKPQGVSQDFTWVQASAG--YLFSVGLGSD--------GKLYSWGDNTYGQL 322

Query: 322 GHGSTNDQLRPSYASSLMD----IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           G+ +T     P   +   +       +Q A G  H + +  +G +Y +G N   QLG G 
Sbjct: 323 GNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGT 382

Query: 378 DQAENVPKLLETP--ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
               + P  ++ P  +      K +S    HS  L  D  +  WG N  G++G G   D 
Sbjct: 383 TTERHAPIQVKMPSGVPSGFAWKQMSGWGWHSLALGSDNWIYGWGANTRGEVGTGSITDN 442

Query: 436 NI-PSLVPIHGFLPRNIACG 454
            I P  +     +P N   G
Sbjct: 443 KITPVRIATPQGVPSNFTWG 462



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 6/117 (5%)

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           I+  Q++AG  H + ++ +G +Y +G N  GQLG G     + P  ++ P   S+    V
Sbjct: 234 IRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWV 293

Query: 401 --SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
             S G   S  L  DG++ SWG N YGQLG   +     P   P++  LP+N   G+
Sbjct: 294 QASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPE--PVN--LPQNAPSGF 346


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 157/375 (41%), Gaps = 71/375 (18%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  +V  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           QLGL                E   S     LL  Q  V             I+CG  H+A
Sbjct: 221 QLGLSDE-------------EDRESPCHVKLLRTQKVVY------------ISCGEEHTA 255

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGR 361
           V+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   G 
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 362 VYVFGGNQFGQLGTG 376
           +Y FG    GQLGTG
Sbjct: 316 IYAFGCGARGQLGTG 330



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Homo sapiens]
          Length = 310

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G    + +   G VYV+G N  G
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVTV 305



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
              + + G+V  WG+N  GQLGLG+S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 217 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 31/197 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS +   P P  +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG      V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G++ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPILESK 395
             ++ P    TP+   K
Sbjct: 295 SNQSYP----TPVTVEK 307



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL   +  K  C   G G    LAT+E G++ TWG       S L +G       P  
Sbjct: 89  PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 144

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+              ++G     ST  
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTVN 191

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
           Q           +K        +    +  +  E              G+     +PC V
Sbjct: 192 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 251

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
               G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++     PTP
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S +  PIP R+ G    K V    CG    +A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 169/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P LI  L         
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQII---QVACGYYHSLALSKASEV 158


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 96/177 (54%), Gaps = 4/177 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGGRH+A+VT  G + ++G    G+ GHG  +D L P    +L +  +E +A G 
Sbjct: 334 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGE 393

Query: 351 WHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G     +G LG G   +  VPK +  P LE      +SCG  H+A
Sbjct: 394 YHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGP-LEGIHVSYISCGPWHTA 452

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           V+T  GQ+ ++G   +G LG GD    ++P  V  + G      +CG WHT  + E 
Sbjct: 453 VVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAVVEV 509



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 129/271 (47%), Gaps = 48/271 (17%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  +A GGRH  +++  G+++ WG    G+LG G     V +  L P L  A S  + 
Sbjct: 332 LDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHG-----VDSDVLHPKLIDALSNTN- 385

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                              ++ +ACG  H+  VT +G L T+G G   YG  GHG+    
Sbjct: 386 -------------------IELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSH 426

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P   +  ++ I V  I+ G WHT  ++  G+++ FG   FG LG G  ++ ++P+ +E
Sbjct: 427 WVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVE 486

Query: 389 TPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLGDSIDRN 436
           +  L+  R    SCG  H+A + E             G++ +WG    G+LG GD   + 
Sbjct: 487 S--LKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 544

Query: 437 IPSLVPI--HGFLPRNIACGWWHTLLLAETT 465
           +P+ V +  H F    +ACG  H+L +A TT
Sbjct: 545 VPTCVALVEHNFC--QVACG--HSLTVALTT 571



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 124/258 (48%), Gaps = 43/258 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R K V  P  +  L+   + + 
Sbjct: 438 GIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR-KSVSLPREVESLKGLRTMR- 495

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                                   +CG  H+A V +             G L T+G G  
Sbjct: 496 -----------------------ASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 532

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+  + L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 533 GRLGHGDKEAKLVPTCVA-LVEHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGN--P 589

Query: 379 QAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           QA+  +P  +E  +L+S   + ++CGA H AVLT   +V +WG    G+LG GD+ DRN 
Sbjct: 590 QADGKLPTRVEGKLLKS-FVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNN 648

Query: 438 PSLV-PIHGFLPRNIACG 454
           P+LV  +     ++IACG
Sbjct: 649 PTLVDALKDKHVKSIACG 666



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 8/151 (5%)

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           G G   D L P    S + + V+ IA G  H   ++ +G ++ +G    G+LG GVD   
Sbjct: 313 GLGVKIDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDV 372

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG---WNKYGQLGLGDSIDRNIP 438
             PKL++   L +   ++V+CG  H+  +T  G + +WG   +N YG LG G+ +   +P
Sbjct: 373 LHPKLIDA--LSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYN-YGLLGHGNQVSHWVP 429

Query: 439 SLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
             V  P+ G     I+CG WHT ++    Q+
Sbjct: 430 KRVNGPLEGIHVSYISCGPWHTAVVTSAGQL 460



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 30/181 (16%)

Query: 231 GQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
           G+++ WG G +G+LG G +  K+VPT   +  +EH                         
Sbjct: 522 GKLFTWGDGDKGRLGHGDKEAKLVPT--CVALVEHNFC---------------------- 557

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
              ++ACG   +  +T +G +   G  +YGQ G+   + +L       L+   VE+IA G
Sbjct: 558 ---QVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKSFVEEIACG 614

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            +H   +++   VY +G    G+LG G     N P L++   L+ K  K ++CG   +A 
Sbjct: 615 AYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDA--LKDKHVKSIACGTNFTAA 672

Query: 410 L 410
           +
Sbjct: 673 I 673


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V+ +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         ++  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V +IACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      ++ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 173/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ +IA GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V  + F 
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF- 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V+ +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|255085030|ref|XP_002504946.1| predicted protein [Micromonas sp. RCC299]
 gi|226520215|gb|ACO66204.1| predicted protein [Micromonas sp. RCC299]
          Length = 526

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 119/246 (48%), Gaps = 37/246 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           ++  V+AG  HT+ +++ G++W WG     Q GLGS       P ++P           P
Sbjct: 212 RVVAVSAGHHHTVCVTEGGELWAWGRNDASQCGLGS-----GAPSVVPL----------P 256

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND---- 328
             +   S  + G  G   V  +A G RH+  VTD GA+ T+G G  G  GHG+       
Sbjct: 257 AWISSASPGAPGNHG--AVMSVAAGPRHNLAVTDRGAVYTWGDGKEGVLGHGADESWRWG 314

Query: 329 -------QLRPSYASSLMD--IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
                  +  P    SL D  I+V   AAGL H+VC+   G V+ +G  +F QLG G   
Sbjct: 315 FWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVHAWGQGRFNQLGVG--- 371

Query: 380 AENVPKLLETP--ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR-- 435
           A+N P     P  +    R + ++ G   +  +  DG ++SWG N  G+LGLG+S D+  
Sbjct: 372 AKNAPAFTTEPTRVPALGRVRDLAAGGNFNVAVGADGSMISWGANGNGELGLGNSNDKRG 431

Query: 436 NIPSLV 441
           ++P LV
Sbjct: 432 DVPRLV 437



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 160/411 (38%), Gaps = 86/411 (20%)

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           +P    VV A+AG +H   VT  G VYT G  E           G  G       G    
Sbjct: 153 IPQGLDVVSASAGGSHTAVVTADGAVYTCGLNE----------HGQLG--HSHDAGYVPI 200

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESE------NPASGDEFFTLSPCLVTL----- 208
           L      P   R          T    E  E      N AS     + +P +V L     
Sbjct: 201 LRPVSGLPQHDRVVAVSAGHHHTVCVTEGGELWAWGRNDASQCGLGSGAPSVVPLPAWIS 260

Query: 209 --NPGV-----KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS----------RIK 251
             +PG       +  VAAG RH L ++D G V+ WG G EG LG G+          R  
Sbjct: 261 SASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYTWGDGKEGVLGHGADESWRWGFWGRDT 320

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
             P P L+  L  A  G +                    V   A G  HS  V   G + 
Sbjct: 321 TEPAPRLVRSL--ADDGIE--------------------VASAAAGLCHSVCVDRTGHVH 358

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDI----QVEQIAAGLWHTVCISVEGRVYVFGG 367
            +G G + Q G G+ N    P++ +    +    +V  +AAG    V +  +G +  +G 
Sbjct: 359 AWGQGRFNQLGVGAKNA---PAFTTEPTRVPALGRVRDLAAGGNFNVAVGADGSMISWGA 415

Query: 368 NQFGQLGTG--VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY- 424
           N  G+LG G   D+  +VP+L+  P   +      S G RH+A  + DG++ +WGW+   
Sbjct: 416 NGNGELGLGNSNDKRGDVPRLVHNP--NAASFASASAGWRHAAATSSDGRLWTWGWSGSV 473

Query: 425 -----------GQLGLGD-SIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
                      GQLGL +   D   P+LV       + ++CG+ HT+ + E
Sbjct: 474 GQHGVDADSTGGQLGLRNGQSDFWEPTLVVGLPGKAKAVSCGFNHTVAVLE 524



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 133/350 (38%), Gaps = 67/350 (19%)

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC--------VPSAKVTRDFGSAGSFQK 151
           LP    VV  +AG  H V VTE GE++ WG  +          PS      + S+ S   
Sbjct: 207 LPQHDRVVAVSAGHHHTVCVTEGGELWAWGRNDASQCGLGSGAPSVVPLPAWISSAS--P 264

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS------------GDEFF 199
            + G   A+ +  A P    A   V  R    +  +  E                G +  
Sbjct: 265 GAPGNHGAVMSVAAGPRHNLA---VTDRGAVYTWGDGKEGVLGHGADESWRWGFWGRDTT 321

Query: 200 TLSPCLVT--LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT-- 255
             +P LV    + G+++   AAG  H++ +   G V  WG G   QLG+G++     T  
Sbjct: 322 EPAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVHAWGQGRFNQLGVGAKNAPAFTTE 381

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
           P  +P L                        GR  V+++A GG  +  V   G+++++G 
Sbjct: 382 PTRVPAL------------------------GR--VRDLAAGGNFNVAVGADGSMISWGA 415

Query: 316 GLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG-GNQFGQ 372
              G+ G G++ND+    P    +         +AG  H    S +GR++ +G     GQ
Sbjct: 416 NGNGELGLGNSNDKRGDVPRLVHNPNAASFASASAGWRHAAATSSDGRLWTWGWSGSVGQ 475

Query: 373 LGTGVDQA------ENVPKLLETPILE---SKRAKVVSCGARHSAVLTED 413
            G   D         N       P L      +AK VSCG  H+  + E+
Sbjct: 476 HGVDADSTGGQLGLRNGQSDFWEPTLVVGLPGKAKAVSCGFNHTVAVLEE 525



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 18/150 (12%)

Query: 22  VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
           V+ WG       G   + +P  +  P R+      +D+  GG  F +A    G +I+WG 
Sbjct: 357 VHAWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRVRDLAAGG-NFNVAVGADGSMISWG- 414

Query: 78  ADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
           A+  G+  L  ++ K G+ P     P  AS   A+AGW H  + +  G ++TWGW   V 
Sbjct: 415 ANGNGELGLGNSNDKRGDVPRLVHNPNAASFASASAGWRHAAATSSDGRLWTWGWSGSVG 474

Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
              V            DSTG Q  L   Q+
Sbjct: 475 QHGV----------DADSTGGQLGLRNGQS 494



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 18/124 (14%)

Query: 358 VEGRVYVFGGNQFGQLGTGVD---------QAENVPKLLETPILESKRAKVVSCGARHSA 408
           V  RV   G   FG+LG G D          AE   ++  T I +       S G  H+A
Sbjct: 113 VATRVVSCGNGDFGRLGHGGDGRGRAGLGMSAETFQRM--TGIPQGLDVVSASAGGSHTA 170

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----IACGWWHTLLLAE 463
           V+T DG V + G N++GQLG        +P L P+ G LP++     ++ G  HT+ + E
Sbjct: 171 VVTADGAVYTCGLNEHGQLGHSHDAGY-VPILRPVSG-LPQHDRVVAVSAGHHHTVCVTE 228

Query: 464 TTQI 467
             ++
Sbjct: 229 GGEL 232


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         ++  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V EIACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      ++ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 173/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ +IA GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V  + F 
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF- 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
          Length = 1060

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 137/304 (45%), Gaps = 52/304 (17%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA---- 266
           GV++  VAA G HTL L D G+V+ WG G EGQLG G+  + VP P  I  L  +     
Sbjct: 117 GVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQLGHGA-FEAVPHPRRIARLPTSVVAVG 175

Query: 267 SGKDRPL-LVRQGSVNSSG---------------KAGRSY-------VKEIACGGRHSAV 303
           +G+   L L   G+V S G                A R+           ++CG RH+AV
Sbjct: 176 AGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAV 235

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI--AAGLWHTVCISVEGR 361
           VT  GAL+T+GW  YGQCG  +  D LRP+      D   E +  A G  HT+C +    
Sbjct: 236 VTADGALVTWGWAAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTLCATRHAS 295

Query: 362 ---VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR------AKVVSCGARHSAVLTE 412
              ++ FG N +GQ G G   +   P+ +    L S+        + +S G RHS     
Sbjct: 296 GDAIWAFGWNAYGQCG-GSTCSAAAPRRVGGKFLGSQEGGDGAVVEALSAGGRHSVCCVR 354

Query: 413 ----DGQVLSWGWNKYGQLGLGDSIDRN-------IPSLVPIHGFLP-RNIACGWWHTLL 460
                    +WG    GQLG GD  DR          + V   G  P R +ACGW HT+ 
Sbjct: 355 LPGGGTATYAWGRGDDGQLGSGDRRDRRANPRVAATAARVNSVGQRPLRGLACGWAHTVF 414

Query: 461 LAET 464
           + + 
Sbjct: 415 VVDA 418



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 119/258 (46%), Gaps = 34/258 (13%)

Query: 233 VWGWGYGGEGQLGLGSR-IKMVP----TPHLIPC-LEHAASGKDRPLLVRQGSVNSSGK- 285
           V+  GY   GQLG G R  ++VP    T  L    ++  A G    ++V  G V S GK 
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVVAGQVASCGKN 93

Query: 286 -------AGRS--------------YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
                   GR                V  +A  G H+  + D G + ++G G  GQ GHG
Sbjct: 94  VHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQLGHG 153

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
           +      P   + L    V  + AG  H++ +  +G VY +G    G LG G  + +  P
Sbjct: 154 AFEAVPHPRRIARL-PTSVVAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAP 212

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
           + +E    +++ A  VSCG+RH+AV+T DG +++WGW  YGQ G     D   P+ VP+ 
Sbjct: 213 RAVE--FFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGGDGLRPAEVPLP 270

Query: 445 GFLPRNI---ACGWWHTL 459
           G         ACG+ HTL
Sbjct: 271 GDGGAECVLAACGYRHTL 288



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 131/360 (36%), Gaps = 108/360 (30%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEP---FPLPTEASVVKAAAGWAHCVSVT 120
           LA  + G++ +WG  D EGQ  L  G     P P     LPT  SVV   AG  H +++ 
Sbjct: 131 LALDDRGRVYSWGRGD-EGQ--LGHGAFEAVPHPRRIARLPT--SVVAVGAGRTHSLALD 185

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
             G VY+WG                         G   AL                  RR
Sbjct: 186 ADGAVYSWG------------------------CGDDGALGHGD--------------RR 207

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
           +  + R          EFF   P             V+ G RH  +++  G +  WG+  
Sbjct: 208 RQLAPRAV--------EFFKTRPA----------AAVSCGSRHNAVVTADGALVTWGWAA 249

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
            GQ G                   A++G D    +R   V   G  G   V   ACG RH
Sbjct: 250 YGQCG-------------------ASAGGDG---LRPAEVPLPGDGGAECVLA-ACGYRH 286

Query: 301 SAVVT---DAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQ-------VEQIAAG 349
           +   T      A+  FGW  YGQCG GST     P       +  Q       VE ++AG
Sbjct: 287 TLCATRHASGDAIWAFGWNAYGQCG-GSTCSAAAPRRVGGKFLGSQEGGDGAVVEALSAG 345

Query: 350 LWHTV-CISVEG---RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
             H+V C+ + G     Y +G    GQLG+G D+ +        P + +  A+V S G R
Sbjct: 346 GRHSVCCVRLPGGGTATYAWGRGDDGQLGSG-DRRDR----RANPRVAATAARVNSVGQR 400


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 158/377 (41%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         ++  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V EIACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 19/255 (7%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH---LIPCLEHAASGK 269
            I  V+ G  HTL L+D GQV+ WG   +GQLGL    + +  P     +P         
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPV-------- 136

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA----VVTDAGALLTFGWGLYGQCGHG- 324
           D+ + +++    +S K+  S +        H A    V   A  +  +G   YGQ G G 
Sbjct: 137 DKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGI 196

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
               Q  P    SL+ I   Q+AAG  H+  +++ G ++ +G N+FGQLG   +    VP
Sbjct: 197 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 256

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPI 443
            LL++  L S++   + CG  H+A LT++G V ++G   YGQLG    S + N   +  +
Sbjct: 257 YLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 314

Query: 444 HGFLPRNIACGWWHT 458
            G +   IACG  HT
Sbjct: 315 MGSIVTQIACGRQHT 329



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 176/426 (41%), Gaps = 74/426 (17%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+     +++   +      +   +E +  AS   +  +S     L P 
Sbjct: 111 DSDGQLGLLGSEECIRVPRKS---IFMPVDKNIRIKECKKTASRKSW--VSTLCSELAPD 165

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
              + +A  G+   +     +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 166 ---SHLAESGQ---VAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL--------- 210

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 211 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 253

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P    SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 254 YVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 313

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V  + F 
Sbjct: 314 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF- 369

Query: 448 PRNIAC 453
           P N  C
Sbjct: 370 PYNGQC 375



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 109/253 (43%), Gaps = 53/253 (20%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV--RQGSVNSSGKAGRSYVKE 293
           WG    GQLGLG                    G D  +++  R+     + K     V++
Sbjct: 4   WGNASFGQLGLG--------------------GIDEEIVLEPRKSDFFINKK-----VRD 38

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           + CG RH+  V D G + T G    GQ GH  +    +P    +L    +  ++ G  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHT 96

Query: 354 VCISVEGRVYVFGGNQFGQLG-TGVDQAENVP-KLLETPILESKRAK-VVSCGARHSAV- 409
           + ++ +G+VY +G +  GQLG  G ++   VP K +  P+ ++ R K      +R S V 
Sbjct: 97  LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVS 156

Query: 410 -----------LTEDGQ-------VLSWGWNKYGQLGLG-DSIDRNIPSLVP-IHGFLPR 449
                      L E GQ       V  WG NKYGQLGLG D   +  P L+  + G    
Sbjct: 157 TLCSELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFM 216

Query: 450 NIACGWWHTLLLA 462
            +A G  H+ +L 
Sbjct: 217 QVAAGGAHSFVLT 229



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 6/122 (4%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GL 429
           GL
Sbjct: 117 GL 118



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G   FGQLG G    E V +  ++    +K+ + V CG RH+  + +DG V + G N  G
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 426 QLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           QLG   S  R  P  +V +       ++CG  HTL L +  Q+
Sbjct: 65  QLGHEKS--RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         ++  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V +IACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 570

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 163/424 (38%), Gaps = 85/424 (20%)

Query: 40  SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           +P+P  L  G     V  G    +LA + +G ++ WG  +D GQ    +     TP    
Sbjct: 80  TPLPVSLPAGTDATAVVAGDF-HSLALTSAGTVLAWGR-NDSGQLGDGTTVSSSTPVVVR 137

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           LP   +V   AAG+ H +++T  G V  WG          +  FG  G            
Sbjct: 138 LPVGVTVTAVAAGFGHSLALTSTGVVLAWG----------SNSFGQLG------------ 175

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
                                              G    + +P  V L  GV +T VAA
Sbjct: 176 ----------------------------------DGTTVSSSTPVAVRLPVGVTVTAVAA 201

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G  H+L L+ +G    WG    GQLG G+ +                     P+ VR   
Sbjct: 202 GSGHSLALTSVGAALAWGNNFSGQLGDGTTVS-----------------SSTPVAVRL-- 242

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                  G + V  +A G  HS  +T AGA L +G    GQ G G+T     P   S  +
Sbjct: 243 -----PVGTT-VTAVAGGSHHSLALTSAGAALAWGGNFSGQLGDGTTVSSSTPVVVSLPV 296

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
              V  +A G  H+V ++  G    +G N  GQLG G +   +VP  +  P   +  A  
Sbjct: 297 GTTVTALAGGDAHSVALTSAGAALAWGSNGDGQLGDGTNADSSVPIAVSLPAGATITAIA 356

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHT 458
              GA H+  +T  G  L+WG N  GQLG G + D ++P  V +  G     IA    H+
Sbjct: 357 AHDGA-HNLAITSTGAALAWGGNGDGQLGDGTNADSSVPIAVSLPAGTTITAIAASVEHS 415

Query: 459 LLLA 462
           L LA
Sbjct: 416 LALA 419



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 30/228 (13%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG    GQLG G+                  +G + PL V       S  AG      +A
Sbjct: 62  WGDNAFGQLGDGTT-----------------TGSNTPLPV-------SLPAGTDATAVVA 97

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
            G  HS  +T AG +L +G    GQ G G+T     P      + + V  +AAG  H++ 
Sbjct: 98  -GDFHSLALTSAGTVLAWGRNDSGQLGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLA 156

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++  G V  +G N FGQLG G   + + P  +  P+  +  A  V+ G+ HS  LT  G 
Sbjct: 157 LTSTGVVLAWGSNSFGQLGDGTTVSSSTPVAVRLPVGVTVTA--VAAGSGHSLALTSVGA 214

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLL 461
            L+WG N  GQLG G ++  + P  V  P+ G     +A G  H+L L
Sbjct: 215 ALAWGNNFSGQLGDGTTVSSSTPVAVRLPV-GTTVTAVAGGSHHSLAL 261



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 7/163 (4%)

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           SAV +DA   L +G   +GQ G G+T     P   S         + AG +H++ ++  G
Sbjct: 52  SAVGSDA--FLAWGDNAFGQLGDGTTTGSNTPLPVSLPAGTDATAVVAGDFHSLALTSAG 109

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            V  +G N  GQLG G   + + P ++  P+  +  A  V+ G  HS  LT  G VL+WG
Sbjct: 110 TVLAWGRNDSGQLGDGTTVSSSTPVVVRLPVGVTVTA--VAAGFGHSLALTSTGVVLAWG 167

Query: 421 WNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLL 461
            N +GQLG G ++  + P  V  P+ G     +A G  H+L L
Sbjct: 168 SNSFGQLGDGTTVSSSTPVAVRLPV-GVTVTAVAAGSGHSLAL 209


>gi|357463177|ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 432

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 129/266 (48%), Gaps = 44/266 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWG--------YGGEGQLGLGSRIKMVPTPHLIPCL 262
           G++I + AAG   T++++D GQV+ +G        YGG+G        K V  P L+  L
Sbjct: 94  GIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYGGQGS-------KTVIAPRLVESL 146

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           ++                         +V + A G   +AV++  G + TF WG  G+ G
Sbjct: 147 KNI------------------------FVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLG 182

Query: 323 HGSTNDQLRPS-YASSLMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGTGVD 378
           H + ++ + P     +L DI V QIAAG  + +C++ +     VY  G    G+LG G  
Sbjct: 183 HHTDSNDMEPHPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTR 242

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
             E  P+L+E     + +  V+S GA H+AV+  DG+V +WGW +YG LG G+      P
Sbjct: 243 TDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAP 302

Query: 439 SLV-PIHGFLPRNIACGWWHTLLLAE 463
            +V  +      ++A G + T ++AE
Sbjct: 303 KVVDALTNVKAVHVATGDYTTFVVAE 328



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 162/381 (42%), Gaps = 86/381 (22%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHC 116
           G G ++A +  G + ++GS +  GQ  L  G   E   P P+ T     +++AAAG    
Sbjct: 51  GPGHSIAVTSKGDVYSFGS-NSSGQ--LGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRT 107

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           + +T++G+VY +G                     KDS G                     
Sbjct: 108 MLITDSGQVYAFG---------------------KDSFG--------------------- 125

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
                      E+E    G +   ++P LV     + + + A G   T +LS  G+V+ +
Sbjct: 126 -----------EAEYGGQGSKT-VIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173

Query: 237 GYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
            +G +G+LG  +    M P P L+  LE      D P++           AG  Y+  +A
Sbjct: 174 SWGSDGKLGHHTDSNDMEPHP-LLGALE------DIPVV--------QIAAGYCYLLCLA 218

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL--MDIQVEQIAAGLWHT 353
           C     +V        + G GL G+ GHG+  D+  P        +++Q   I+AG WH 
Sbjct: 219 CQPSGMSV-------YSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHA 271

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
             +  +GRV  +G  ++G LG G ++ E  PK+++   L + +A  V+ G   + V+ ED
Sbjct: 272 AVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDA--LTNVKAVHVATGDYTTFVVAED 329

Query: 414 GQVLSWGWNKYGQLGLGDSID 434
           G V S+G  +   LG    ID
Sbjct: 330 GDVYSFGCGESASLGHNAVID 350



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 10/169 (5%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT  G + +FG    GQ GHG+T ++ RP    +L  I++ Q AAG   T+ I+  
Sbjct: 54  HSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDS 113

Query: 360 GRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           G+VY FG + FG+   G   ++ V  P+L+E+  L++      + G   +AVL+ +G+V 
Sbjct: 114 GQVYAFGKDSFGEAEYGGQGSKTVIAPRLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 171

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLLA 462
           ++ W   G+  LG   D N     P+ G L       IA G+ + L LA
Sbjct: 172 TFSWGSDGK--LGHHTDSNDMEPHPLLGALEDIPVVQIAAGYCYLLCLA 218



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ ++ +G VY FG N  GQLG G  + E  PK + T  L+  R    + GA
Sbjct: 47  QAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRT--LQGIRIIQAAAGA 104

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI--PSLV-PIHGFLPRNIACGWWHTLLL 461
             + ++T+ GQV ++G + +G+   G    + +  P LV  +        A G + T +L
Sbjct: 105 GRTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVL 164

Query: 462 AETTQI 467
           +   ++
Sbjct: 165 SREGRV 170


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         ++  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V +IACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 155/418 (37%), Gaps = 97/418 (23%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  + G + TWG        +    K    P          + +AA G  HC++V + 
Sbjct: 50  SLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ 109

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G  Y WG  E          +G                          + GEE +K    
Sbjct: 110 GRAYAWGGNE----------YG--------------------------QCGEEPLKDEMG 133

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
              R +   P                 P + + +VAAGG H+++L+  G VW W     G
Sbjct: 134 RPVRRDIVIPKR-------------CAPKLTVRQVAAGGTHSVVLTREGHVWTW-----G 175

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           Q      IK +  P  +  LE+                          V  IA G  H+ 
Sbjct: 176 QPWPPGDIKQIFVPVRVQGLEN--------------------------VSIIAVGAFHNL 209

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            + + G LL +G   YGQ G G T     P     L D+ +  IAAG WH+  ++ +G V
Sbjct: 210 ALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEV 269

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           Y +G  + G+LG G +   +     +  +L  +    VSCG  HS  LT DG++ S+G  
Sbjct: 270 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRG 329

Query: 423 KYGQLGLGDSIDRNIPSLVPIHGFLPRN-----------------IACGWWHTLLLAE 463
            +G+LG G  +    P  +PI    P                   IACG  HTL + E
Sbjct: 330 DHGRLGYGRKVTTGQPLELPIMIPPPEGSFNHADEEEEGKWSAKWIACGGRHTLAIVE 387



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 44/274 (16%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           C+V       +  V +G R++L + D G ++ WG+   G LG     K    P  +  L 
Sbjct: 30  CVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALA 89

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
           +                          + + A GG H   V D G    +G   YGQCG 
Sbjct: 90  NVK------------------------ITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 324 GSTNDQL-RPSYASSLM------DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
               D++ RP     ++       + V Q+AAG  H+V ++ EG V+ +G         G
Sbjct: 126 EPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWG----QPWPPG 181

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
             +   VP  ++   LE+    +++ GA H+  L EDG++L+WG N+YGQLG GD+   +
Sbjct: 182 DIKQIFVPVRVQG--LEN--VSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTS 237

Query: 437 IPSLVPIHGFLPR---NIACGWWHTLLLAETTQI 467
            P  VP+HG       +IA G WH+  L +  ++
Sbjct: 238 HP--VPVHGLDDLTLVDIAAGGWHSTALTDKGEV 269



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 4/104 (3%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +  +G  + GQLG G ++ +    ++E   LE    + V  G+R+S  + +DG + +WGW
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEA--LEPYSVRSVVSGSRNSLAICDDGTMFTWGW 64

Query: 422 NKYGQLGL-GDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           N+ G LG   ++   NIPS V  +        A G WH L + +
Sbjct: 65  NQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDD 108


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 161/395 (40%), Gaps = 93/395 (23%)

Query: 53  KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
           K V   GCG    +   + G + T G  +D GQ  L   K  + PE        ++V  +
Sbjct: 34  KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
            G AH +++ + G+VY WG                      DS G+   L          
Sbjct: 91  CGEAHTLALNDKGQVYAWGL---------------------DSDGQLGLL---------- 119

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
              EE ++  +   +  +                       ++I +VA G  H+L LS  
Sbjct: 120 -GSEECIRVPRNIKSLSD-----------------------IQIVQVACGYYHSLALSKA 155

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            +V+ WG    GQLGLG+  K   +P LI  L                        G  +
Sbjct: 156 SEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL-----------------------LGIPF 192

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           + ++A GG HS V+T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  
Sbjct: 193 M-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICC 249

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH- 406
           G  HT  ++ EG V+ FG   +GQLG      E  P K+ E   L       ++CG +H 
Sbjct: 250 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQIACGRQHT 306

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V+ +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 133/306 (43%), Gaps = 82/306 (26%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH + L+  G+V+ WG G +G+LG  SR+                  
Sbjct: 1853 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 1896

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L ++G G YG+ GHG    
Sbjct: 1897 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT 1947

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--- 383
            QLRP     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+   
Sbjct: 1948 QLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQN 2007

Query: 384  -------------------------------------------------PKLLETPILES 394
                                                             P+++E   L  
Sbjct: 2008 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG--LRG 2065

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
            K+   V+ GA H   +TE GQV +WG N +GQ G G +     P+LV  + G     +AC
Sbjct: 2066 KKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 2125

Query: 454  GWWHTL 459
            G  H++
Sbjct: 2126 GSSHSV 2131



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+++ WG   +G+LG G+R      +++ 
Sbjct: 2838 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIE 2897

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   +  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 2898 SLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVI 2957

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            ++ACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 2958 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3017

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 3018 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 3075

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 3076 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 3125



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 141/349 (40%), Gaps = 69/349 (19%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GE+Y+WG           R      +V             + G 
Sbjct: 2853 VAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGA 2912

Query: 157  QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             SA  T         A  E+    K    R        GD    L P LV    G ++  
Sbjct: 2913 HSACIT---------ASGELYTWGKGRYGRL-----GHGDSEDQLKPKLVEALQGHRVID 2958

Query: 217  VA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
            VA  +G   TL L+D   VW WG G  G+LG G                  + G   P+ 
Sbjct: 2959 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-----------------GSDGCKVPM- 3000

Query: 275  VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
                 ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP  
Sbjct: 3001 ----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 3053

Query: 335  ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
               L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L+ 
Sbjct: 3054 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--LQG 3111

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 3112 KKINRVACGSAHT---------LAWSTSKPTNAG-------KLPAQVPM 3144



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 34/269 (12%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            T +  L TL P   I     GG  TL  ++  G+++  GYG  G+LG     + V TP L
Sbjct: 2788 TPTEALATLRPVQLI-----GGEQTLFAVTADGKLYATGYGAGGRLG-IGGTESVSTPTL 2841

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + +R+ +VNS              GG+H   ++  G L ++G    
Sbjct: 2842 LESIQH--------VFIRKVAVNS--------------GGKHCLALSSEGELYSWGEAED 2879

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+ +   RP    SL  ++V  IAAG  H+ CI+  G +Y +G  ++G+LG G  
Sbjct: 2880 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDS 2939

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + +  PKL+E   L+  R   V+CG+    +  LT+D  V SWG   YG+LG G S    
Sbjct: 2940 EDQLKPKLVEA--LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCK 2997

Query: 437  IPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            +P  +  + G     + CG   ++ L ++
Sbjct: 2998 VPMKIDSLTGLGVVKVECGSQFSVALTKS 3026



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + S     VVK 
Sbjct: 1807 AGGSKSLFAVTAEGKVYACGEA--------TNGRLGLGLSSGTIPIPRQISALSNYVVKK 1858

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H +++T  G+V++WG            D G  G F + +  K   +   +  
Sbjct: 1859 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 1908

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P LV +  G ++ +VA G
Sbjct: 1909 RIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACG 1968

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 1969 SRDAQTLALTDEGMVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 2010

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHG+     +P     L
Sbjct: 2011 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGL 2063

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+V+ +G N  GQ G G       P L++   LE ++  
Sbjct: 2064 RGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 2121

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 2122 RVACGSSHSVAWT 2134



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 128/284 (45%), Gaps = 42/284 (14%)

Query: 196  DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM-------GQVWGWGYGGEGQLG--L 246
            DE     P L + N   +  K A G      LS +        +V+ WG   + QLG   
Sbjct: 1726 DEDLATVPFLASDNEEEEDEKTATGSMSRKRLSGLESAATIRTKVFVWGLNDKDQLGGLK 1785

Query: 247  GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
            GS+IK       +P      S  +                    V ++A G +    VT 
Sbjct: 1786 GSKIK-------VPSFSETLSALN--------------------VVQVAGGSKSLFAVTA 1818

Query: 307  AGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVY 363
             G +   G    G+ G G ++  +  P   S+L +  V+++A  +G  H + ++V+G+V+
Sbjct: 1819 EGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVF 1878

Query: 364  VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
             +G    G+LG       + P+L+E   L++KR + ++CG+ HSA +T  G++ SWG  +
Sbjct: 1879 SWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 1936

Query: 424  YGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETTQ 466
            YG+LG GD+  +  P LV +  G     +ACG      LA T +
Sbjct: 1937 YGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDE 1980



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 3016 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3074

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 3075 CTEDGEVYTWG 3085



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 2766 YGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 2825

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      R   V+ G +H   L+ +G++ SWG  + G+LG G
Sbjct: 2826 GRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHG 2885

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    +IA G  H+
Sbjct: 2886 NRSPCDRPRVIESLRGVEVVDIAAGGAHS 2914



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G+L +WG A+D        GK G    +P   P   E+     
Sbjct: 2852 KVAVNSGGKHCLALSSEGELYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGVE 2903

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   +T +GE+YTWG
Sbjct: 2904 VVDIAAGGAHSACITASGELYTWG 2927


>gi|255569912|ref|XP_002525919.1| Protein pim1, putative [Ricinus communis]
 gi|223534748|gb|EEF36439.1| Protein pim1, putative [Ricinus communis]
          Length = 478

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 169/405 (41%), Gaps = 68/405 (16%)

Query: 94  TPEPFPLPTEASV--VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
           +PE F  P  A+   +  A G  H  +V   G ++TWG  E          FG  G   +
Sbjct: 50  SPELFGCPAGANARWLDIACGREHTAAVASDGSLFTWGANE----------FGQLGDGTE 99

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRK-----TSSAREESENPAS------------ 194
           +          ++ P   K+   E VK        T++  E  EN  +            
Sbjct: 100 EG---------KKYPKKVKQLETEFVKSVSCGAHCTAAIAEPRENDGTISTSRLWVWGQN 150

Query: 195 -GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
            G  +  L      LN    I +V+ G  H + LS+ G +  WGY   GQLG G   + +
Sbjct: 151 QGSNYPRLFSGAFALN--TIICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRGITCEGL 208

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
             P +I    +A    + P LV+              +  ++CG  H+A +++ G + T+
Sbjct: 209 QGPRVINA--YAKFLDEAPELVK--------------ITRVSCGEYHTAAISEKGEVYTW 252

Query: 314 GWGLYGQCGHGST---NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
           G G  GQ GH S    N +L P    +L  I +  +A G  HT  ++ +G +Y +GG+QF
Sbjct: 253 GLGSTGQLGHTSLQSGNKELLPRRVVALDGILITDVACGGVHTCAVTQKGALYAWGGSQF 312

Query: 371 GQLGTG--VDQAENVPKLLET------PILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           GQLG G        +P   E+       ++     ++V+CG  H+ +   DG++  WG+N
Sbjct: 313 GQLGLGPQTGSFSFIPSDTESFLRNIPALVFPTGVQLVACGHSHTLICLRDGRIHGWGYN 372

Query: 423 KYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
            YGQ     +     PS V       R +A G  H+ +L +   +
Sbjct: 373 SYGQAANEKTTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 417



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 106/255 (41%), Gaps = 48/255 (18%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTP-HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           ++ WGY   GQ G   + + +  P  L P L    +G +   L                 
Sbjct: 23  IYVWGYNHNGQTGRKGKEQELRIPKQLSPELFGCPAGANARWL----------------- 65

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
            +IACG  H+A V   G+L T+G   +GQ G G+   +  P     L    V+ ++ G  
Sbjct: 66  -DIACGREHTAAVASDGSLFTWGANEFGQLGDGTEEGKKYPKKVKQLETEFVKSVSCGAH 124

Query: 352 HTVCIS---------VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
            T  I+            R++V+G NQ            N P+L       +     VSC
Sbjct: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ----------GSNYPRLFSGAFALNTIICQVSC 174

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSID-----RNIPSLVPIHGFLPR-----NIA 452
           GA H   L+EDG + +WG+N+YGQLG G + +     R I +        P       ++
Sbjct: 175 GAVHVVALSEDGLLQAWGYNEYGQLGRGITCEGLQGPRVINAYAKFLDEAPELVKITRVS 234

Query: 453 CGWWHTLLLAETTQI 467
           CG +HT  ++E  ++
Sbjct: 235 CGEYHTAAISEKGEV 249



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 89/249 (35%), Gaps = 76/249 (30%)

Query: 65  ATSESGKLITWG--SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           A SE G++ TWG  S    G + L SG     P          +   A G  H  +VT+ 
Sbjct: 242 AISEKGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVALDGILITDVACGGVHTCAVTQK 301

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G +Y WG  +          FG  G      TG  S +P++                   
Sbjct: 302 GALYAWGGSQ----------FGQLG--LGPQTGSFSFIPSDT------------------ 331

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                        + F    P LV    GV++  VA G  HTLI    G++ GWGY   G
Sbjct: 332 -------------ESFLRNIPALV-FPTGVQL--VACGHSHTLICLRDGRIHGWGYNSYG 375

Query: 243 QLG-LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           Q     +     P+P +  C+                            V+++A GG HS
Sbjct: 376 QAANEKTTYAWYPSP-VDWCVGE--------------------------VRKLAAGGGHS 408

Query: 302 AVVTDAGAL 310
           AV+TDA +L
Sbjct: 409 AVLTDACSL 417


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 131/271 (48%), Gaps = 32/271 (11%)

Query: 202 SPCLVTLNPGVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           +P L+     +KI K+AA   G H L LS  G V+ WG G  G+LG G            
Sbjct: 501 APVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDI---------- 550

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
                    +  P LV++  VN         + +IACG  +SA VT  G L T+G G YG
Sbjct: 551 ---------RREPELVKE-LVNKK-------ITQIACGSTYSAAVTSNGELYTWGRGSYG 593

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           + GHG++ D+L P+  + L    V  +A  +G  HT+ I  +G V+ +G   +G+LG G 
Sbjct: 594 RLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGG 653

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
                VPK++ET    +K    V CG++ S  L +DG V +WG +   +LG G       
Sbjct: 654 SDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRY 713

Query: 438 PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           P +V  +  +   +IA G  H L L +  QI
Sbjct: 714 PKMVEGLINYHIVDIAVGPSHCLALTDNCQI 744



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 129/312 (41%), Gaps = 83/312 (26%)

Query: 205  LVTLNPG-VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
            L TLN   VK   V  GGRH+L ++  G+V+ WG G +G+LG G       T  L P L 
Sbjct: 2948 LDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGD-----VTSRLSPTLI 3002

Query: 264  HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
             A   K                     + EIACG  HSA VT  G L T+G G YG+ GH
Sbjct: 3003 EALESK--------------------LIVEIACGSSHSAAVTADGELYTWGLGDYGRLGH 3042

Query: 324  GSTNDQLRPSYASSL-----MDI------------------------------------- 341
            G +     P    +L     +DI                                     
Sbjct: 3043 GDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGC 3102

Query: 342  ------------QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
                         V +IA G   ++ +S  G+V+ +G   + +LG G D     P+L+E 
Sbjct: 3103 NIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEG 3162

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFL 447
            P L+ KR   ++ GA H   +T+ G+V SWG N +GQ G G++     P +    + G  
Sbjct: 3163 P-LKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICLGELDGVK 3221

Query: 448  PRNIACGWWHTL 459
              +IACG  H++
Sbjct: 3222 ISHIACGSSHSI 3233



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 129/284 (45%), Gaps = 35/284 (12%)

Query: 217  VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP------HLIPCLEHAASGK 269
            +A G +   I++  G+V+  G G  G+LGLG+   + +P        H +  +     G+
Sbjct: 2907 IAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGR 2966

Query: 270  DRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRHSAVVTDA 307
                + R+G V S      GK G                    + EIACG  HSA VT  
Sbjct: 2967 HSLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTAD 3026

Query: 308  GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVF 365
            G L T+G G YG+ GHG +     P    +L D +V  IA G     T+ ++    V+ +
Sbjct: 3027 GELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSW 3086

Query: 366  GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
            G   FG+LG G  +  N+P+ ++   L  +    ++CGA+ S  L+  G+V +WG   Y 
Sbjct: 3087 GDGDFGKLGRGGSEGCNIPQKIDA--LCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYY 3144

Query: 426  QLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
            +LG G+      P L+  P+       IA G  H L + +T ++
Sbjct: 3145 RLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEV 3188



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 129/314 (41%), Gaps = 80/314 (25%)

Query: 201  LSPCLVTLNPGVKITK--VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            ++P ++     +KI K  V +GGRH ++L+   +V+ WG G +G+LG G ++    TP  
Sbjct: 3844 VTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSS-ETPRK 3902

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            I  L                        G+  V  I+CG  HSA +T  G L T+G G Y
Sbjct: 3903 IEAL-----------------------LGKQIV-HISCGSSHSAAITSKGELYTWGKGRY 3938

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            G+ GHG  +D L+P    +L   +V  +A  +G   T+ I+ +  V+ +G   +G+LG G
Sbjct: 3939 GRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRG 3998

Query: 377  VDQAENVPKLLETPI--------------------------------------------- 391
                   P  +E+ I                                             
Sbjct: 3999 GSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRP 4058

Query: 392  -----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
                 L+ K+   V+ G+ H    T+ G+V +WG N  GQLG G       P+LV +   
Sbjct: 4059 RKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVTVLEN 4118

Query: 447  LPRN-IACGWWHTL 459
            +  N + CG  H+ 
Sbjct: 4119 VKLNRVGCGSAHSF 4132



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 96/215 (44%), Gaps = 29/215 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L P L+      K+  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 3944 GDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRG----- 3998

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G  +PL +     +  G A    V ++ CG + S  +T  G L T
Sbjct: 3999 ------------GSDGCKKPLRIE----SLIGMA----VCKVECGSQFSVALTKNGDLYT 4038

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHG+ +   RP   + L   Q+  +AAG  H V  +  G V+ +G N  GQ
Sbjct: 4039 WGKGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQ 4098

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            LG G      +P+     +LE+ +   V CG+ HS
Sbjct: 4099 LGNGT--LNPIPEPTLVTVLENVKLNRVGCGSAHS 4131



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 27/233 (11%)

Query: 202  SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
            SP +  +   ++ T VA G +   IL+  G+V+  G GG G+LG+G    +V TP +I  
Sbjct: 3793 SPVINDIIAALRPTAVAGGEQTLFILTSEGKVYASGLGGSGRLGIGRSDNIV-TPVIIEP 3851

Query: 262  LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
            L+H        L + + SV+S              GGRH+ V+T    + ++G G  G+ 
Sbjct: 3852 LQH--------LKIEKLSVHS--------------GGRHAMVLTSNFEVFSWGDGEDGKL 3889

Query: 322  GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            GHG       P    +L+  Q+  I+ G  H+  I+ +G +Y +G  ++G+LG G     
Sbjct: 3890 GHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDC 3949

Query: 382  NVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
              PKLLE   L+S +   V+CG+    +  +T+D  V SWG   YG+LG G S
Sbjct: 3950 LKPKLLEA--LKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGS 4000



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 34/228 (14%)

Query: 232  QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            + + WG+   GQLG   G+++K      +I  L   A                       
Sbjct: 3771 KFYVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTA----------------------- 3807

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA-- 347
                +A G +   ++T  G +   G G  G+ G G +++ + P     L  +++E+++  
Sbjct: 3808 ----VAGGEQTLFILTSEGKVYASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVH 3863

Query: 348  AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            +G  H + ++    V+ +G  + G+LG G   +   P+ +E   L  K+   +SCG+ HS
Sbjct: 3864 SGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEA--LLGKQIVHISCGSSHS 3921

Query: 408  AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
            A +T  G++ +WG  +YG+LG GD  D   P L+  +  +   ++ACG
Sbjct: 3922 AAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVIDVACG 3969



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 16/91 (17%)

Query: 46   LCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFP 99
            LCG    +DVC   CG  F+LA S +GK+ TWG  D     Y   G     H  +P+   
Sbjct: 3111 LCG----RDVCRIACGAQFSLALSTTGKVWTWGKGD-----YYRLGHGNDSHYRSPQLIE 3161

Query: 100  LPTEAS-VVKAAAGWAHCVSVTEAGEVYTWG 129
             P +   + + A G  HC++VT+ GEVY+WG
Sbjct: 3162 GPLKKKRITEIAVGALHCLAVTDTGEVYSWG 3192



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 55   VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
            VC   CG  F++A +++G L TWG  D     + T+  H   P          +V  AAG
Sbjct: 4017 VCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTND-HVRRPRKVACLQGKQIVTVAAG 4075

Query: 113  WAHCVSVTEAGEVYTWG 129
              HCV+ T+AGEV+TWG
Sbjct: 4076 SLHCVACTDAGEVFTWG 4092



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 25/170 (14%)

Query: 201 LSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           L P LV    G  +  VA  +G  HTL +   G VW WG G  G+LG G        P +
Sbjct: 604 LLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGS-DCCKVPKV 662

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           +  L+H                         Y+  + CG + S  +   G + T+G    
Sbjct: 663 VETLKHH----------------------NKYIVNVLCGSQFSVALGKDGTVWTWGKSDG 700

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            + GHG+ +    P     L++  +  IA G  H + ++   +++ +G +
Sbjct: 701 YRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWGSD 750



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 25/154 (16%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
            G+ + KV  G + ++ L+  G ++ WG G   +LG G+    V  P  + CL+       
Sbjct: 4014 GMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTN-DHVRRPRKVACLQ------- 4065

Query: 271  RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                            G+  V  +A G  H    TDAG + T+G    GQ G+G+ N   
Sbjct: 4066 ----------------GKQIVT-VAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIP 4108

Query: 331  RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
             P+  + L ++++ ++  G  H+   S E  + +
Sbjct: 4109 EPTLVTVLENVKLNRVGCGSAHSFAWSTEAPIDI 4142



 Score = 41.6 bits (96), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 57/154 (37%), Gaps = 53/154 (34%)

Query: 358  VEGRVYVFGGNQFGQLG------------------------------------------- 374
            ++ RV+V+G N  GQLG                                           
Sbjct: 2867 IDSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVS 2926

Query: 375  -------TGVDQAEN--VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
                    G+   EN  +P  L+T  +   +   V  G RHS  +T +G+V SWG    G
Sbjct: 2927 GEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDG 2986

Query: 426  QLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +LG GD   R  P+L+  +   L   IACG  H+
Sbjct: 2987 KLGHGDVTSRLSPTLIEALESKLIVEIACGSSHS 3020


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 140/298 (46%), Gaps = 38/298 (12%)

Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           SP LVT    + +TKV+  +GG H + L+  G  + WG G  GQLG G+ +     PHLI
Sbjct: 634 SPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNLMS-CSKPHLI 692

Query: 260 PCL------------EHAASGKDRPLLVRQGSVNSSGKAGR-----------------SY 290
                           H+A+  +   L   G +   G+ G                    
Sbjct: 693 EAFVGKIVTDISCGSAHSAAIVENKYLYTWG-LGDFGRLGHGDEETILQPKFVTHFLGYN 751

Query: 291 VKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           V +++CG R   +  +TD   + ++G G +G+ G G +   L P     L  +Q+ +I  
Sbjct: 752 VVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILC 811

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G   TV ++  G V+ +G   F +LG G D     PKL+E   L  K    ++ GA H  
Sbjct: 812 GAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEG--LRGKHVIDIAVGALHCL 869

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
            +T+DG+V SWG N +GQLG G++  + +P+L+  +H    + +ACG  H++   E T
Sbjct: 870 AVTQDGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHSIAWTEIT 927



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 99/220 (45%), Gaps = 29/220 (13%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           GDE   L P  VT   G  + +V+ G R   T+ ++D  +VW WG G  G+LG G     
Sbjct: 733 GDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRG----- 787

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                          G +R L+     V      G    K I CG + +  +T  G + T
Sbjct: 788 ---------------GSERCLI----PVEVEQLRGLQICK-ILCGAQFTVALTKTGTVWT 827

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G + + GHG+     +P     L    V  IA G  H + ++ +G V+ +G N  GQ
Sbjct: 828 WGKGDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQ 887

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           LGTG    + VP L+    L + R K V+CG+ HS   TE
Sbjct: 888 LGTGETDVKKVPNLITG--LHNHRIKYVACGSSHSIAWTE 925



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 95/226 (42%), Gaps = 31/226 (13%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-----RIKMVPTPHLIPCLEHA 265
            G  IT + AGG H+  +   G+++ WG G  G+LG G      + K V        L+ A
Sbjct: 1580 GKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVA 1639

Query: 266  ASGKDRPLLVRQGSVN-------SSGKAGR-----------------SYVKEIACGGRHS 301
                D   L      N         GK GR                   + ++ CG + S
Sbjct: 1640 CGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFS 1699

Query: 302  AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
              +T  G L T+G G Y + GHG+     RP   ++L +  V  I+ G  H V  + EG 
Sbjct: 1700 MALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGE 1759

Query: 362  VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            VY +G N  GQLG G   A   P L     L +K+   +SCG+ H+
Sbjct: 1760 VYCWGDNDEGQLGDGTIIARQTPTL--NTFLLNKKIDRISCGSAHT 1803



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 27/266 (10%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP L      ++   +A G + T  +++ G+++  G    G+LG+G     V +P L+  
Sbjct: 581 SPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTG 640

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           L          L+V + SV+S              GG H   +T  G   ++G G  GQ 
Sbjct: 641 LNQ--------LIVTKVSVHS--------------GGNHVMALTSDGLAFSWGDGENGQL 678

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           GHG+     +P    + +   V  I+ G  H+  I     +Y +G   FG+LG G ++  
Sbjct: 679 GHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEETI 738

Query: 382 NVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
             PK + T  L     + VSCG+R   +  +T+D +V SWG   +G+LG G S    IP 
Sbjct: 739 LQPKFV-THFLGYNVVQ-VSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLIPV 796

Query: 440 LVP-IHGFLPRNIACGWWHTLLLAET 464
            V  + G     I CG   T+ L +T
Sbjct: 797 EVEQLRGLQICKILCGAQFTVALTKT 822



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 27/245 (11%)

Query: 199  FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            F+   C+  ++  +K   V        I +D   V+  GYG  GQLGLG   + V +P L
Sbjct: 1462 FSAEMCVKLIDNLLKEHNVKIDCDTVCITTDGALVFATGYGNNGQLGLGYS-ETVTSPRL 1520

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H          +++ SV+S              GGRH   ++  G + ++G G  
Sbjct: 1521 LESIKHIN--------IKKISVHS--------------GGRHCLALSSDGEVFSWGEGED 1558

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+     +P          +  I AG  H+  I + G +Y +G  ++G+LG G  
Sbjct: 1559 GKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDS 1618

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
              +  PK +E   L+      V+CG+    +  +T D  V SWG   YG+LG G S    
Sbjct: 1619 DDQLKPKQVEA--LQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCK 1676

Query: 437  IPSLV 441
            +P ++
Sbjct: 1677 VPMII 1681



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 25/152 (16%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P ++    G  I KV  G + ++ L+  G ++ WG G   +LG G+              
Sbjct: 1678 PMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTE------------- 1724

Query: 263  EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
            EH      RP++V               V  I+CG  H  V TD G +  +G    GQ G
Sbjct: 1725 EHVR----RPMMVT--------ALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLG 1772

Query: 323  HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
             G+   +  P+  + L++ ++++I+ G  HT+
Sbjct: 1773 DGTIIARQTPTLNTFLLNKKIDRISCGSAHTI 1804



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 55  VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
           +C   CG  F +A +++G + TWG  D     + T   H   P+         V+  A G
Sbjct: 806 ICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTD-IHVRQPKLVEGLRGKHVIDIAVG 864

Query: 113 WAHCVSVTEAGEVYTWG 129
             HC++VT+ GEV++WG
Sbjct: 865 ALHCLAVTQDGEVFSWG 881



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++ G L TWG  D     + T  +H   P          V   + G  HCV 
Sbjct: 1695 GSQFSMALTKYGVLYTWGKGDYYRLGHGTE-EHVRRPMMVTALFNKIVTSISCGSLHCVV 1753

Query: 119  VTEAGEVYTWG 129
             T+ GEVY WG
Sbjct: 1754 CTDEGEVYCWG 1764



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 72/205 (35%), Gaps = 66/205 (32%)

Query: 56   CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE----ASVVKAAA 111
            CG G    L  +    + +WG  D     Y   G+ G      P+  E      +VK   
Sbjct: 1640 CGSGDAQTLCITNDDNVWSWGDGD-----YGKLGRGGSDGCKVPMIIEDLSGKGIVKVEC 1694

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G    +++T+ G +YTWG                 G + +   G                
Sbjct: 1695 GSQFSMALTKYGVLYTWG----------------KGDYYRLGHGT--------------- 1723

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
              EE V+R                       P +VT      +T ++ G  H ++ +D G
Sbjct: 1724 --EEHVRR-----------------------PMMVTALFNKIVTSISCGSLHCVVCTDEG 1758

Query: 232  QVWGWGYGGEGQLGLGSRI-KMVPT 255
            +V+ WG   EGQLG G+ I +  PT
Sbjct: 1759 EVYCWGDNDEGQLGDGTIIARQTPT 1783


>gi|384251643|gb|EIE25120.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 567

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 66/283 (23%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG-GEGQLGLGSRIKMVPTPHLIP 260
           +PC+    PG+++ +VAAGG H+ +L+D G+VW WG   G+  + +    K V       
Sbjct: 186 TPCV----PGLRVKQVAAGGMHSCVLTDTGEVWTWGEPWGDFSMKVDRHPKKV------- 234

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                           +G+++         + ++ACG  H+  +  AG +L +G   +GQ
Sbjct: 235 ----------------EGAID---------IVKLACGAFHNLALNAAGEVLAWGINDFGQ 269

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG-------------RVYVFGG 367
            G+GST  +  P+    L D++V  I AG WH++ ++ EG              V+V+G 
Sbjct: 270 LGNGSTFYETSPTKVLGLEDVRVADIVAGGWHSLALTTEGGAHPQIECAKAGKMVFVWGR 329

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
            ++G+LG G     +  KL  T +  + +    SCG  H+ VLT +G++ +WG   +G+L
Sbjct: 330 GEYGRLGLGDRSGSS--KLRATGV--AFKEPDASCGGTHTMVLTSEGRIYTWGRGSFGRL 385

Query: 428 GLGDSIDRNIPSLVPIHGFLP------RNIAC--GWWHTLLLA 462
           G G   D     L P+  FLP      R I C  G  H+L+LA
Sbjct: 386 GTGTEKDY----LSPVEVFLPGGPERWRVICCASGGRHSLVLA 424



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 30/237 (12%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V+GWG   +GQL L    + V  P ++  L          L  R          GR ++K
Sbjct: 51  VFGWGVNEDGQLAL-DEAENVMAPKVLEAL----------LGTR--------FQGRDFLK 91

Query: 293 E-IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
             + CG R +  +   G +L++GW      GH     + +P   ++L  +++ Q++ G W
Sbjct: 92  SPLVCGSRCTVAIDADGQVLSWGWNDRATLGHSHREHERKPRRVAALRGMEITQVSTGGW 151

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE-TPILESKRAKVVSCGARHSAVL 410
           H + +   G VY +GGN++GQ     +   NV  +++ TP +   R K V+ G  HS VL
Sbjct: 152 HCLALDSAGLVYAWGGNEYGQ----CNVEWNVRDVVQPTPCVPGLRVKQVAAGGMHSCVL 207

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           T+ G+V +WG   +G   +   +DR+   +      +   +ACG +H L L    ++
Sbjct: 208 TDTGEVWTWG-EPWGDFSM--KVDRHPKKVEGAIDIV--KLACGAFHNLALNAAGEV 259



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 150/413 (36%), Gaps = 112/413 (27%)

Query: 19  ETVVYMWGYLPGTS---PEKSPILSP------IPARLCGGDSWKD--VCGGGCGFALATS 67
           E VV+ WG          E   +++P      +  R  G D  K   VCG  C   +A  
Sbjct: 48  EAVVFGWGVNEDGQLALDEAENVMAPKVLEALLGTRFQGRDFLKSPLVCGSRC--TVAID 105

Query: 68  ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
             G++++WG  D     + +  +H   P          + + + G  HC+++  AG VY 
Sbjct: 106 ADGQVLSWGWNDRATLGH-SHREHERKPRRVAALRGMEITQVSTGGWHCLALDSAGLVYA 164

Query: 128 WGWRE------------------CVPSAKVTR-DFGSAGSFQKDSTGK---------QSA 159
           WG  E                  CVP  +V +   G   S     TG+           +
Sbjct: 165 WGGNEYGQCNVEWNVRDVVQPTPCVPGLRVKQVAAGGMHSCVLTDTGEVWTWGEPWGDFS 224

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA---------------SGDEFFTLSPC 204
           +  ++ P   K  G   + +    +    + N A               +G  F+  SP 
Sbjct: 225 MKVDRHP--KKVEGAIDIVKLACGAFHNLALNAAGEVLAWGINDFGQLGNGSTFYETSPT 282

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMG-------------QVWGWGYGGEGQLGLGSRIK 251
            V     V++  + AGG H+L L+  G              V+ WG G  G+LGLG R  
Sbjct: 283 KVLGLEDVRVADIVAGGWHSLALTTEGGAHPQIECAKAGKMVFVWGRGEYGRLGLGDR-- 340

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
                          SG  +        + ++G A +    + +CGG H+ V+T  G + 
Sbjct: 341 ---------------SGSSK--------LRATGVAFKE--PDASCGGTHTMVLTSEGRIY 375

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG---LWHTVCISVEGR 361
           T+G G +G+ G G+  D L P          VE    G    W  +C +  GR
Sbjct: 376 TWGRGSFGRLGTGTEKDYLSP----------VEVFLPGGPERWRVICCASGGR 418



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAK-----VVSCGARHSAVL 410
           +E  V+ +G N+ GQL   +D+AENV  PK+LE  +    + +      + CG+R +  +
Sbjct: 47  IEAVVFGWGVNEDGQL--ALDEAENVMAPKVLEALLGTRFQGRDFLKSPLVCGSRCTVAI 104

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLL 461
             DGQVLSWGWN    LG         P  V  + G     ++ G WH L L
Sbjct: 105 DADGQVLSWGWNDRATLGHSHREHERKPRRVAALRGMEITQVSTGGWHCLAL 156



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 13/167 (7%)

Query: 311 LTFGWGLY--GQCGHGSTNDQLRPSYASSLM-------DIQVEQIAAGLWHTVCISVEGR 361
           + FGWG+   GQ       + + P    +L+       D     +  G   TV I  +G+
Sbjct: 50  VVFGWGVNEDGQLALDEAENVMAPKVLEALLGTRFQGRDFLKSPLVCGSRCTVAIDADGQ 109

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           V  +G N    LG    + E  P+ +    L       VS G  H   L   G V +WG 
Sbjct: 110 VLSWGWNDRATLGHSHREHERKPRRVAA--LRGMEITQVSTGGWHCLALDSAGLVYAWGG 167

Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           N+YGQ  +  ++ R++    P + G   + +A G  H+ +L +T ++
Sbjct: 168 NEYGQCNVEWNV-RDVVQPTPCVPGLRVKQVAAGGMHSCVLTDTGEV 213


>gi|281212541|gb|EFA86701.1| hypothetical protein PPL_00504 [Polysphondylium pallidum PN500]
          Length = 237

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 124/256 (48%), Gaps = 38/256 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPTPHLIPCLEHAASGKDRPLL 274
           VAAG  H+L L+D G ++GWG+  +GQLG  S  + K VP P  I   +   SG      
Sbjct: 2   VAAGWGHSLALTDNGAIYGWGWTNDGQLGSISNEKDKPVPLPKEISMEQPEFSGN----- 56

Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
                           +  I  G  +S  +T  G L+++G G +GQ GHG       P+ 
Sbjct: 57  ----------------IVGIYAGSDYSMSLTRDGRLISWGSGEFGQLGHGDCQHSNTPTA 100

Query: 335 ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
            +    I+   ++ G  HT+ I  +G +Y FG N  GQLG G     +VP L++  +   
Sbjct: 101 INGFEAIRF--VSCGFSHTMIIDSKGDLYTFGWNGSGQLGLGDKSNRSVPTLVDPMLFCG 158

Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF-------- 446
           ++ K+V+ G  HS  LTE G++ +WG    G+LG GD+ +     LVP   +        
Sbjct: 159 EKLKMVAAGRAHSVALTESGRLFTWGSGSKGKLGNGDTSNE---LLVPTQLYDIDENQIE 215

Query: 447 LPR--NIACGWWHTLL 460
            P+  NIA G+ HTL+
Sbjct: 216 TPKVVNIATGFDHTLI 231



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 113/269 (42%), Gaps = 61/269 (22%)

Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
            AAGW H +++T+ G +Y WGW         T D G  GS   +   K   LP E +   
Sbjct: 2   VAAGWGHSLALTDNGAIYGWGW---------TND-GQLGSISNEKD-KPVPLPKEISMEQ 50

Query: 169 DKRAGEEV-----------VKR--RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
            + +G  V           + R  R  S    E      GD   + +P    +N    I 
Sbjct: 51  PEFSGNIVGIYAGSDYSMSLTRDGRLISWGSGEFGQLGHGDCQHSNTP--TAINGFEAIR 108

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT--PHLIPCLEHAASGKDRP 272
            V+ G  HT+I+   G ++ +G+ G GQLGLG +  + VPT    ++ C E         
Sbjct: 109 FVSCGFSHTMIIDSKGDLYTFGWNGSGQLGLGDKSNRSVPTLVDPMLFCGEK-------- 160

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLR 331
                             +K +A G  HS  +T++G L T+G G  G+ G+G T N+ L 
Sbjct: 161 ------------------LKMVAAGRAHSVALTESGRLFTWGSGSKGKLGNGDTSNELLV 202

Query: 332 PSYASSLMDIQVE-----QIAAGLWHTVC 355
           P+    + + Q+E      IA G  HT+ 
Sbjct: 203 PTQLYDIDENQIETPKVVNIATGFDHTLI 231


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 97/176 (55%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGGRH+A+VT  G + T+G    G+ GHG  +D L+P    +L +  +E ++ G 
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGE 369

Query: 351 WHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G     FG LG G + +  +PK +  P LE      ++CG  H+A
Sbjct: 370 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGP-LEGIHVSSIACGPWHTA 428

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           V+T  GQ+ ++G   +G LG GD     +P  V  + G      ACG WHT  + E
Sbjct: 429 VVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVWHTAAVVE 484



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ +A G  HT +++  GQ++ +G G  G LG G R   V  P  +  L+       
Sbjct: 414 GIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-GSVTMPREVESLK------- 465

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G L T+G G  
Sbjct: 466 ----------------GLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK 508

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+  ++L+D    +++ G   TV ++  G VY  G   +GQLG    
Sbjct: 509 GRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHA 568

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
             + VP  +E  + +S   + ++CGA H AVLT   +V +WG    G+LG GD+ DRN P
Sbjct: 569 DGK-VPVRVEGKLSKS-FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSP 626

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     ++IACG
Sbjct: 627 TLVEALKDKQVKSIACG 643



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 128/303 (42%), Gaps = 53/303 (17%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A GGRH  +++  G+++ WG    G+LG G    ++  P L+  L     E  +
Sbjct: 308 LDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVL-QPKLVDALGNTNIELVS 366

Query: 267 SGKDRPLLVR---------QGSVNS-----------------SGKAGRSYVKEIACGGRH 300
            G+     V           G+ N                  +G     +V  IACG  H
Sbjct: 367 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWH 426

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI---- 356
           +AVVT AG L TFG G +G  GHG       P    SL  ++  + A G+WHT  +    
Sbjct: 427 TAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVWHTAAVVEVM 486

Query: 357 --------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
                      G+++ +G    G+LG G  + + VP  +    L       VSCG   + 
Sbjct: 487 VGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAA--LVDPNFCRVSCGHSMTV 544

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN----IACGWWHTLLLAET 464
            LT  G V + G   YGQLG     D  +P  V + G L ++    IACG +H  +L   
Sbjct: 545 ALTTSGHVYTMGSPVYGQLG-NPHADGKVP--VRVEGKLSKSFVEEIACGAYHVAVLTSR 601

Query: 465 TQI 467
           T++
Sbjct: 602 TEV 604



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S + + V+ IA G  H   ++ +G ++ +G    G+LG GVD     PKL+
Sbjct: 295 DSLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLV 354

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPSLV--PI 443
           +   L +   ++VSCG  H+  +T  G + +WG   Y  G LG G+ +   IP  +  P+
Sbjct: 355 DA--LGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPL 412

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G    +IACG WHT ++    Q+
Sbjct: 413 EGIHVSSIACGPWHTAVVTSAGQL 436



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 74/162 (45%), Gaps = 25/162 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +V+ G   T+ L+  G V+  G    GQLG         
Sbjct: 514 GDKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLG--------- 564

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            PH        A GK  P+ V        GK  +S+V+EIACG  H AV+T    + T+G
Sbjct: 565 NPH--------ADGK-VPVRVE-------GKLSKSFVEEIACGAYHVAVLTSRTEVYTWG 608

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  G+ GHG T+D+  P+   +L D QV+ IA G   T  I
Sbjct: 609 KGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAI 650



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 156/384 (40%), Gaps = 70/384 (18%)

Query: 53  KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAA 110
           +++  GG   AL T + G++ TWG   +E    L  G   +  +P  +      ++   +
Sbjct: 311 QNIACGGRHAALVTKQ-GEIFTWG---EESGGRLGHGVDSDVLQPKLVDALGNTNIELVS 366

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS--TGKQSALPTEQAPPS 168
            G  H  +VT +G++YTWG          T +FG  G   + S    K+   P E    S
Sbjct: 367 CGEYHTCAVTLSGDLYTWG--------DGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVS 418

Query: 169 DKRAG---EEVVKRRKTSSAREESENPAS------GDEFFTLSPCLVTLNPGVKITKVAA 219
               G     VV    TS+ +  +    +      GD      P  V    G++  + A 
Sbjct: 419 SIACGPWHTAVV----TSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAAC 474

Query: 220 GGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAA 266
           G  HT  + ++            G+++ WG G +G+LG G +  K+VPT     C+    
Sbjct: 475 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPT-----CVAALV 529

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
                P   R                 ++CG   +  +T +G + T G  +YGQ G+   
Sbjct: 530 D----PNFCR-----------------VSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHA 568

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
           + ++       L    VE+IA G +H   ++    VY +G    G+LG G     N P L
Sbjct: 569 DGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTL 628

Query: 387 LETPILESKRAKVVSCGARHSAVL 410
           +E   L+ K+ K ++CG   +A +
Sbjct: 629 VEA--LKDKQVKSIACGTNFTAAI 650


>gi|33239431|ref|NP_776292.1| protein RCC2 [Mus musculus]
 gi|71152034|sp|Q8BK67.1|RCC2_MOUSE RecName: Full=Protein RCC2
 gi|26344982|dbj|BAC36140.1| unnamed protein product [Mus musculus]
 gi|55991474|gb|AAH86666.1| Regulator of chromosome condensation 2 [Mus musculus]
          Length = 520

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 128/282 (45%), Gaps = 54/282 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H A  
Sbjct: 145 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEALSHEA-- 201

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +TD G++  FG    GQ G G+  D
Sbjct: 202 ----------------------IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTD 239

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 240 AV-PSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 298

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 299 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 358

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAET 464
           +LG  +  D  +P LV +  F  R    I  G+  +  ++E 
Sbjct: 359 RLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEV 400



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 136/336 (40%), Gaps = 68/336 (20%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L+D G V+ +G    GQLG
Sbjct: 174 RNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLG 233

Query: 246 LGSRIKMVPTPHLI-----PCLEHAASGKDRPLLVRQGSV-------------NSSGK-- 285
           LG++   VP+P  I     P  + A   +   L+  +G++             NS GK  
Sbjct: 234 LGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFI 293

Query: 286 -------------------------------AGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                               V+++ACG  H+ V+     + ++G
Sbjct: 294 ARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWG 353

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G YG+ GH    D++ P     L D       QI AG   +  +S  G ++ +G     
Sbjct: 354 FGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTS 412

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN-KYGQLGLG 430
           +      ++   PK ++   L   R + ++CG + S ++  D   +SWG +  +G+LG G
Sbjct: 413 R------ESTMYPKAVQD--LCGWRIRSLACG-KSSIIVAADESTISWGPSPTFGELGYG 463

Query: 431 DSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLAE 463
           D   ++  +   +  + G     +A G+ H+L++A 
Sbjct: 464 DHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIAR 499


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         ++  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V +IACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 157/375 (41%), Gaps = 71/375 (18%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  +V  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           QLGL                E   S     LL  Q  V             I+CG  H+A
Sbjct: 221 QLGLSDE-------------EDRESPCHVKLLRTQKVV------------YISCGEEHTA 255

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGR 361
           V+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   G 
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 362 VYVFGGNQFGQLGTG 376
           +Y FG    GQLGTG
Sbjct: 316 IYAFGCGARGQLGTG 330



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 169/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P LI  L         
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQII---QVACGYYHSLALSKASEV 158


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 169/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P LI  L         
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQII---QVACGYYHSLALSKASEV 158


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      ++ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 173/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ +IA GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V  + F 
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF- 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      ++ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 173/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ +IA GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V  + F 
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF- 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158


>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
           GTPase regulator-like [Equus caballus]
          Length = 915

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 144/294 (48%), Gaps = 43/294 (14%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPT 255
           C+  L P  K+  VA G  HT++ ++ G+V+  G   EGQLGLG         RIK   +
Sbjct: 80  CIKALKPE-KVKFVACGRTHTIVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKEI---------------A 295
            H I  L   +S      L   G +     NS G+ G   +  +               +
Sbjct: 139 QHKIKQLSAGSSSSAA--LTEDGELFMWGDNSEGQIGLKNIDNVCVPHQVTIGKPISWVS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGS---TNDQLRPSYASSLMDIQVEQIAAGLWH 352
           CG  HSA +T  G L TFG    G+ G  S    N ++ P     + + +V Q+A G  H
Sbjct: 197 CGYYHSAFITTEGELYTFGEPESGKLGLPSKLLINHRI-PQLVPGIPE-KVIQVACGGGH 254

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLT 411
           TV ++ E  VY FG  QFGQLG G    E + P ++E   ++ ++   +SCG  H+A++T
Sbjct: 255 TVVLT-ENAVYTFGLGQFGQLGLGTFIFETSEPTVIEH--IKDQKISYISCGENHTALIT 311

Query: 412 EDGQVLSWGWNKYGQLGLG--DSIDRNIPSL-VPIHGFLPRNIACGWWHTLLLA 462
           + G + ++G  ++G+LGLG  +  ++ +P+L      F+ + +ACG  H L+ A
Sbjct: 312 DTGLIYTFGDGRHGKLGLGLENFTNQFVPTLCCSSRRFIVQLVACGGCHMLVFA 365



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +ACG  H+AVVT    L  FG   +GQ G GS +   +P+   +L   +V+ +A G  HT
Sbjct: 40  LACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G+VY  GGN  GQLG G D+  N    ++       + K +S G+  SA LTED
Sbjct: 100 IVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKF-FTSQHKIKQLSAGSSSSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     ++CG++H+  + 
Sbjct: 159 GELFMWGDNSEGQIGLKNIDNVCVPHQVTI-GKPISWVSCGYYHSAFIT 206



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 36/253 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +A G  HT +++   +++ +G    GQLGLGS    V  P  I  L        +P    
Sbjct: 40  LACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSE-SPVSKPTCIKAL--------KP---- 86

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ---LRPS 333
                         VK +ACG  H+ V T+ G +   G    GQ G G   D+    R  
Sbjct: 87  ------------EKVKFVACGRTHTIVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIK 134

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
           + +S   I+  Q++AG   +  ++ +G ++++G N  GQ+  G+   +NV   +   +  
Sbjct: 135 FFTSQHKIK--QLSAGSSSSAALTEDGELFMWGDNSEGQI--GLKNIDNV--CVPHQVTI 188

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS--IDRNIPSLVPIHGFLPRNI 451
            K    VSCG  HSA +T +G++ ++G  + G+LGL     I+  IP LVP        +
Sbjct: 189 GKPISWVSCGYYHSAFITTEGELYTFGEPESGKLGLPSKLLINHRIPQLVPGIPEKVIQV 248

Query: 452 ACGWWHTLLLAET 464
           ACG  HT++L E 
Sbjct: 249 ACGGGHTVVLTEN 261



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 12/134 (8%)

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           VV D+GA+ TFG   + +           PS      DI +  +A G  HT  ++   ++
Sbjct: 7   VVPDSGAVFTFGKTRFAEN---------IPSKFWFKNDIPI-CLACGDEHTAVVTGNNKL 56

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           Y+FG N +GQLG G +   + P  ++   L+ ++ K V+CG  H+ V TE G+V + G N
Sbjct: 57  YMFGSNNWGQLGLGSESPVSKPTCIKA--LKPEKVKFVACGRTHTIVATEGGKVYATGGN 114

Query: 423 KYGQLGLGDSIDRN 436
             GQLGLGD  DRN
Sbjct: 115 SEGQLGLGDDEDRN 128


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P LI  L         
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQII---QVACGYYHSLALSKASEV 158


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 4/182 (2%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
           AGR  V+ I+CGGRH+ +VT  G + ++G    G+ GHG   D  +P    +L  + +E 
Sbjct: 308 AGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEALAHMNIEL 367

Query: 346 IAAGLWHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           +A G +HT  +++ G +Y +G     FG LG G + +  +PK L  P LE      +SCG
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGP-LEGIHVSSISCG 426

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
             H+AV+T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + 
Sbjct: 427 PWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVV 486

Query: 463 ET 464
           E 
Sbjct: 487 EV 488



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 132/293 (45%), Gaps = 47/293 (16%)

Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +SG +   L P  +     + +  ++ GGRH  +++  G+V+ WG    G+LG G     
Sbjct: 292 SSGAKMDCLLPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD- 350

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
           VP P L+  L H                          ++ +ACG  H+  VT +G L T
Sbjct: 351 VPQPKLVEALAHMN------------------------IELVACGEYHTCAVTLSGDLYT 386

Query: 313 FGWGL--YGQCGHGSTNDQLRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           +G G   +G  GHG+      P   +  ++ I V  I+ G WHT  ++  G+++ FG   
Sbjct: 387 WGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGS 446

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE------------DGQVL 417
           FG LG G  Q+ +VP+ +E+  L+  R    +CG  H+A + E             G++ 
Sbjct: 447 FGVLGHGDRQSLSVPREVES--LKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIF 504

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAETTQI 467
           +WG    G+LG GD   R +P+ V     +  N   +ACG   T+ L  +  +
Sbjct: 505 TWGDGDKGRLGHGDKDTRLVPTCVA--SLVEPNFCQVACGHCFTVALTTSGHV 555



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 125/258 (48%), Gaps = 42/258 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R + +  P  +  L+       
Sbjct: 417 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDR-QSLSVPREVESLK------- 468

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD------------AGALLTFGWGLY 318
                           G   V+  ACG  H+A V +            +G + T+G G  
Sbjct: 469 ----------------GLRTVR-AACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDK 511

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG  + +L P+  +SL++    Q+A G   TV ++  G VY  G + +GQLG    
Sbjct: 512 GRLGHGDKDTRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGN--P 569

Query: 379 QAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           QA+  VP  +E   L     + +SCGA H AVLT   +V +WG    G+LG GD+ DRN 
Sbjct: 570 QADGMVPARVEGK-LHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNS 628

Query: 438 PSLV-PIHGFLPRNIACG 454
           P+LV  +     R++ CG
Sbjct: 629 PTLVEALKDKQVRSVVCG 646



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 163/407 (40%), Gaps = 70/407 (17%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
            +S  K   L P P    G    +++  GG    L T + G++ +WG   +E    L  G
Sbjct: 291 NSSGAKMDCLLPKPLEFAGRLDVQNISCGGRHATLVTKQ-GEVYSWG---EESGGRLGHG 346

Query: 90  KHGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
              + P+P  +   A  ++   A G  H  +VT +G++YTWG          T +FG  G
Sbjct: 347 VDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLSGDLYTWG--------NGTFNFGLLG 398

Query: 148 SFQKDS--TGKQSALPTEQAPPSDKRAG---EEVVKRRKTSSAREESENPAS------GD 196
              + S    K+   P E    S    G     VV    TS+ +  +    S      GD
Sbjct: 399 HGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVV----TSAGQLFTFGDGSFGVLGHGD 454

Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEGQL 244
                 P  V    G++  + A G  HT  + ++            G+++ WG G +G+L
Sbjct: 455 RQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRL 514

Query: 245 GLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
           G G +  ++VPT     C+           LV                 ++ACG   +  
Sbjct: 515 GHGDKDTRLVPT-----CVAS---------LVEPNFC------------QVACGHCFTVA 548

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           +T +G + T G  +YGQ G+   +  +       L    VE+I+ G +H   ++    VY
Sbjct: 549 LTTSGHVYTMGSSVYGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVY 608

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            +G    G+LG G     N P L+E   L+ K+ + V CG   +A +
Sbjct: 609 TWGKGANGRLGHGDTDDRNSPTLVEA--LKDKQVRSVVCGINFTAAI 653



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 69/165 (41%), Gaps = 25/165 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G V+  G    GQLG      MVP
Sbjct: 517 GDKDTRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMVP 576

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                        GK  +++V+EI+CG  H AV+T    + T+G
Sbjct: 577 -------------------------ARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWG 611

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            G  G+ GHG T+D+  P+   +L D QV  +  G+  T  I + 
Sbjct: 612 KGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAICIH 656


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 158/377 (41%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 158/377 (41%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P LI  L         
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQII---QVACGYYHSLALSKASEV 158


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 158/377 (41%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 158/377 (41%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      ++ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 172/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ +IA GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V  + F 
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF- 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P LI  L         
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQII---QVACGYYHSLALSKASEV 158


>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
           magnipapillata]
          Length = 809

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 176/446 (39%), Gaps = 95/446 (21%)

Query: 22  VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
           +Y WG  P    G   E   +   +   L G D     CG      LA S +G++ +WG 
Sbjct: 375 IYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTE--HTLAVSVNGEMFSWGC 432

Query: 78  ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
               G+  L +      P         ++   +    H  SVTE+GE+YT          
Sbjct: 433 GRG-GKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYT---------- 481

Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
                FG +G     +T  +     +QA P            RK                
Sbjct: 482 -----FGRSGPHLGYTTEDR-----KQAVP------------RK---------------- 503

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
                   V  +   KI  V+ G   T+ L+  G+++ +G    GQLG G     +  P+
Sbjct: 504 --------VDFSTANKIKAVSCGLEFTIALNSEGELYSFGKNDCGQLGAG-HFNDIEEPY 554

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           LI  L                            + +++CG +H   VT  G +  +G   
Sbjct: 555 LIKHLNGVR------------------------ISKVSCGSKHVGAVTVNGDVWLWGSNE 590

Query: 318 YGQCGHGSTNDQLRPSYA-SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           +GQ G         P  A S+  + +++ I  G  HTV +S  G VYVFG  Q GQLG  
Sbjct: 591 FGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSGQLGVA 650

Query: 377 VDQAE---NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
           V+Q       P +L  P   +K AKV  CG  H+A +TE G + +WG    G+LG GD  
Sbjct: 651 VNQTSPYITNPCILSMPN-NTKIAKV-DCGIEHTAAVTESGCLYTWGNGSRGRLGHGDHQ 708

Query: 434 DRNIPSLVPIHGFLP-RNIACGWWHT 458
           DR +P+LV    +   ++IACG +HT
Sbjct: 709 DRYVPTLVESLAYKQVQSIACGAYHT 734



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 141/304 (46%), Gaps = 38/304 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMV 253
           G+E   L P +V    G  I  VA G  HTL +S  G+++ WG G  G+LGL + + + +
Sbjct: 389 GEETEELFPRVVEALLGRDIRTVACGTEHTLAVSVNGEMFSWGCGRGGKLGLKNILDRYM 448

Query: 254 PTP---------HLIPCLE-HAAS----------GKDRPLL------VRQGSVNSSGKAG 287
           P             + C E H+AS          G+  P L       +Q        + 
Sbjct: 449 PLKIGAFENVNITFVSCNELHSASVTESGELYTFGRSGPHLGYTTEDRKQAVPRKVDFST 508

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
            + +K ++CG   +  +   G L +FG    GQ G G  ND   P     L  +++ +++
Sbjct: 509 ANKIKAVSCGLEFTIALNSEGELYSFGKNDCGQLGAGHFNDIEEPYLIKHLNGVRISKVS 568

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKVVSCGARH 406
            G  H   ++V G V+++G N+FGQLGT   +A ++P   E P    ++  + + CG  H
Sbjct: 569 CGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLEAHDIP--FEAPSTFWNEEIQDIKCGGSH 626

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRN-----IACGWWHTLL 460
           + VL+  G V  +G  + GQLG+  ++++  P +  P    +P N     + CG  HT  
Sbjct: 627 TVVLSCTGVVYVFGNGQSGQLGV--AVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAA 684

Query: 461 LAET 464
           + E+
Sbjct: 685 VTES 688



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 2/159 (1%)

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           L+   +G D    +R  S     KA    + E+   G   +V  DA  + T+G    G  
Sbjct: 327 LQALINGFDNLDGLRLMSEADLSKADGKLMLELGLFGDRVSVKEDACDIYTWGASPKGVL 386

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           GHG   ++L P    +L+   +  +A G  HT+ +SV G ++ +G  + G+LG       
Sbjct: 387 GHGEETEELFPRVVEALLGRDIRTVACGTEHTLAVSVNGEMFSWGCGRGGKLGLKNILDR 446

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            +P  L+    E+     VSC   HSA +TE G++ ++G
Sbjct: 447 YMP--LKIGAFENVNITFVSCNELHSASVTESGELYTFG 483



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 7/109 (6%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +Y +G +  G LG G +  E  P+++E   L  +  + V+CG  H+  ++ +G++ SWG 
Sbjct: 375 IYTWGASPKGVLGHGEETEELFPRVVEA--LLGRDIRTVACGTEHTLAVSVNGEMFSWGC 432

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLLLAETTQI 467
            + G+LGL + +DR +P  + I  F   NI   +C   H+  + E+ ++
Sbjct: 433 GRGGKLGLKNILDRYMP--LKIGAFENVNITFVSCNELHSASVTESGEL 479


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 123/269 (45%), Gaps = 37/269 (13%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L TL    ++  V+ G  H+L +   G+V+ WG G EGQLG+G   ++   P  I  L
Sbjct: 70  PALETL----RVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTL 125

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                       + +++CG  HS  +++ G L T+G   +GQ G
Sbjct: 126 TDIK------------------------IIQVSCGHHHSLALSEDGRLFTWGSNSHGQLG 161

Query: 323 HGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G     Q  P     L  I + Q+AAG  H+  +S+ G  + +G N  GQL     + +
Sbjct: 162 LGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLAL---RKK 218

Query: 382 NVP-----KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
           NVP     K      LE+     +SCG  H+AVLT+ G+V ++G N YGQLG   +  + 
Sbjct: 219 NVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKE 278

Query: 437 IPSLVPIHGFLPRNIACGWWHTLLLAETT 465
            P LV     L   I CG +HTL    TT
Sbjct: 279 GPQLVEGIDGLVSQIDCGSYHTLAYVYTT 307



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 122/267 (45%), Gaps = 40/267 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G ++ + A+G RH+L+L   G++  +G    GQLG    ++    P  IP LE       
Sbjct: 22  GAELRQAASGERHSLLLLSNGELHSYGDNSHGQLG-RRDVQRQEQPKRIPALETLR---- 76

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-Q 329
                               V  ++CG  HS  V   G +  +G G  GQ G G  N+  
Sbjct: 77  --------------------VDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEIN 116

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE 388
           L P    +L DI++ Q++ G  H++ +S +GR++ +G N  GQLG G +  ++  P+ ++
Sbjct: 117 LIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQ 176

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP--------SL 440
              L+      V+ G  HS  L+  G    WG N  GQL L     +N+P        S+
Sbjct: 177 --FLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRK---KNVPVVQSSKPCSV 231

Query: 441 VPIHGFLPRNIACGWWHTLLLAETTQI 467
             +       I+CG+ HT +L +T ++
Sbjct: 232 DALENLGVVYISCGYEHTAVLTQTGKV 258



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 85/148 (57%), Gaps = 5/148 (3%)

Query: 286 AGR--SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
           AGR  + +++ A G RHS ++   G L ++G   +GQ G      Q +P    +L  ++V
Sbjct: 18  AGRGGAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRV 77

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSC 402
           + ++ G  H++ +  +GRV+ +G    GQLG G  ++   +P+ ++T  L   +   VSC
Sbjct: 78  DLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKT--LTDIKIIQVSC 135

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           G  HS  L+EDG++ +WG N +GQLGLG
Sbjct: 136 GHHHSLALSEDGRLFTWGSNSHGQLGLG 163



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 125/324 (38%), Gaps = 64/324 (19%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +L    +G+L ++G  +  GQ      +  E P+  P      V   + G  H ++V   
Sbjct: 35  SLLLLSNGELHSYGD-NSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSLAVCYK 93

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G V+ WG              GS G        + + +P +    +D       +K  + 
Sbjct: 94  GRVFAWGA-------------GSEGQLGIGEFNEINLIPRKIKTLTD-------IKIIQV 133

Query: 183 SSAREESENPASGDEFFT------------------LSPCLVTLNPGVKITKVAAGGRHT 224
           S     S   +     FT                   SP  V    G+ +T+VAAGG H+
Sbjct: 134 SCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHS 193

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH-LIPCLEHAASGKDRPLLVRQGSVNSS 283
             LS  G  +GWG   EGQL L  R K VP      PC                 SV++ 
Sbjct: 194 FALSLSGASFGWGSNSEGQLAL--RKKNVPVVQSSKPC-----------------SVDAL 234

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              G  Y   I+CG  H+AV+T  G + TFG   YGQ G+  T  +  P     + D  V
Sbjct: 235 ENLGVVY---ISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGI-DGLV 290

Query: 344 EQIAAGLWHTVC-ISVEGRVYVFG 366
            QI  G +HT+  +   G+V  FG
Sbjct: 291 SQIDCGSYHTLAYVYTTGKVVSFG 314


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 158/377 (41%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 6/139 (4%)

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P     + D  V+++A G  H+V +  +G VY  G N  GQLG   ++  N P+  +  
Sbjct: 24  EPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPE--QIG 79

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLV-PIHGFLP 448
            L  +    V+CG  HS  L++ GQ+ SWG    GQLGL  + D   +P L+  ++    
Sbjct: 80  ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139

Query: 449 RNIACGWWHTLLLAETTQI 467
             ++CG WH L LA   Q 
Sbjct: 140 LQVSCGNWHCLALAADGQF 158


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 156/376 (41%), Gaps = 55/376 (14%)

Query: 70  GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           G++ + GS +D+GQ  L   KH   PE        ++ + A G  H +++T  G+V+ WG
Sbjct: 142 GQVYSCGS-NDQGQ--LGHKKHRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWG 198

Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSAL-PTEQAPPSDKRAGEEVVKRRKTSSAREE 188
                                 D+   Q  L P+E +     R+              E 
Sbjct: 199 ----------------------DNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDEL 236

Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
                +  +F T  P LV    G KI ++  G   +L+LS+ G V+ WG    GQL L  
Sbjct: 237 DAATLAYMDFMT-RPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCL-R 294

Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
            +K VP P L+  L                            ++++A GGRH+  +T  G
Sbjct: 295 ELKTVPVPTLVKELYGIP------------------------IRQLAAGGRHTLALTFNG 330

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            + ++G   +GQ G G T     PS   +L       IA G  H+V ++  G VY FG  
Sbjct: 331 QVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAG 390

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT-EDGQVLSWGWNKYGQL 427
             GQLG G  Q E  P+++    L  K A  V CG RH+ V   +  ++ ++G    GQL
Sbjct: 391 GQGQLGHGTLQNEINPRMIFE--LMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQL 448

Query: 428 GLGDSIDRNIPSLVPI 443
           G G  ++     L P+
Sbjct: 449 GTGVGVEPQQHVLTPM 464



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 121/302 (40%), Gaps = 71/302 (23%)

Query: 231 GQVWGWGYGGEGQLGL---GSRIKMVPTPHLIPCLEHA---------ASGKDRPLLVRQG 278
           G VW WG   +GQLGL         VP P  +               A G+   L +  G
Sbjct: 83  GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLVDG 142

Query: 279 SVNSSG---------KAGRS-----------YVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            V S G         K  RS            + +IACG  HS  +T  G +  +G    
Sbjct: 143 QVYSCGSNDQGQLGHKKHRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWGDNKA 202

Query: 319 GQCGHGSTNDQLRPSYASS---------------------LMDI-------------QVE 344
            Q G   +    +PS  SS                      MD              ++ 
Sbjct: 203 SQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRALTGHKIV 262

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           QI  G   ++ +S  G V+ +G N  GQL     +   VP L++   L     + ++ G 
Sbjct: 263 QIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKE--LYGIPIRQLAAGG 320

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPRNIACGWWHTLLLA 462
           RH+  LT +GQV SWG N++GQLG+GD+    IPS +    H F   +IACG  H+++L 
Sbjct: 321 RHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCA-HIACGEDHSVVLT 379

Query: 463 ET 464
           ET
Sbjct: 380 ET 381



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 10/117 (8%)

Query: 358 VEGRVYVFGGNQFGQLGTGV--DQAENVPKLLE----TPILESKRAKVVSCGARHSAVLT 411
           + G V+ +G    GQLG  +  D    VP+  E    + +  S  A  ++CG  H+  L 
Sbjct: 81  LAGSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLV 140

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            DGQV S G N  GQ  LG    R+ P  V  +  +    IACG  H+L L    Q+
Sbjct: 141 -DGQVYSCGSNDQGQ--LGHKKHRSKPERVDALEPYTITQIACGETHSLALTSNGQV 194


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/235 (33%), Positives = 109/235 (46%), Gaps = 27/235 (11%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           +G +  T  P  V    GV    V+ GG HT+++S+ G+V+ WG G  GQLG GSR  + 
Sbjct: 63  TGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNL- 121

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
            TP ++     A  G+D                    V  + CG  H+ +V   G L T 
Sbjct: 122 TTPSVV----QAMRGRD--------------------VLAVTCGVGHTVIVLAGGELYTC 157

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           GW   GQCG GST+D L P    SL    V+  + G  HT  ++  G V+ FG    GQL
Sbjct: 158 GWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQL 217

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
           G G  Q  ++P+      L      +V+CG  ++     D +V  +G N  GQLG
Sbjct: 218 GHGDCQDLSMPR--RVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLG 270



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 34/274 (12%)

Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           A G++  + +P ++    G ++  VA G  H+ ++   G+V  WG    GQ G G++ + 
Sbjct: 10  AVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQ-EQ 68

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
              P  +  L   A                           ++CGG H+ VV++ G + +
Sbjct: 69  TEHPTFVGSLFGVA------------------------CMSVSCGGAHTVVVSEDGRVFS 104

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G  GQ GHGS ++   PS   ++    V  +  G+ HTV +   G +Y  G N+ GQ
Sbjct: 105 WGLGANGQLGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQ 164

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVV---SCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G G     +   LL    +ES R + V   SCGA H+AV+T  G+V ++G    GQLG 
Sbjct: 165 CGVG-----STSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGH 219

Query: 430 GDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
           GD  D ++P  V  + G +   +ACG  +T+  A
Sbjct: 220 GDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAA 253



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 149/399 (37%), Gaps = 83/399 (20%)

Query: 22  VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
           VY WG       E+    +P   +   G   +DV  G    A+    SG+++ WG  +  
Sbjct: 1   VYFWGQAGSAVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMG-SGEVLCWGE-NKY 58

Query: 82  GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTR 141
           GQ    + +  E P         + +  + G AH V V+E G V++WG            
Sbjct: 59  GQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWG------------ 106

Query: 142 DFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
             G+ G     S                                R+    P+        
Sbjct: 107 -LGANGQLGHGS--------------------------------RDNLTTPS-------- 125

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
              +V    G  +  V  G  HT+I+   G+++  G+   GQ G+GS   ++ +P  +  
Sbjct: 126 ---VVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLL-SPQCVES 181

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           L              +G  ++S  AG            H+AVVT  G + TFG G  GQ 
Sbjct: 182 LR------------GEGVQHASCGAG------------HTAVVTGGGEVFTFGSGSCGQL 217

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           GHG   D   P    +L+ I +  +A G  +TVC + + RV+ FG N  GQLG       
Sbjct: 218 GHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHP 277

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            + +  +   L+ +  ++  C       LT  G + +WG
Sbjct: 278 YLSEPRQMEFLKEEEVELCKCNQSEVIALTRRGALRAWG 316


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 90  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 136

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 137 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 185

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 186 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 243

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 244 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 303

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 304 ACGRQHTL 311



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 158/377 (41%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 8   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 66

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG           
Sbjct: 67  KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 114

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 115 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 164

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 165 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 224

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 225 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 257

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 258 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 317

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 318 GLIYAFGCGARGQLGTG 334



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 40  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 79

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 80  -------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 132

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 133 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 190

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 191 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 246

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 247 KVVYISCGEEHTAVLTKS 264



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 5   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 63

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 64  LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 119

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 120 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 162


>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
           cuniculus]
          Length = 882

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+  VA G  HTL+ ++ G V+  G   +GQLGLG          I    +
Sbjct: 80  CVKALKPE-KVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVCVPHQVTIGKPISWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L TFG    G+ G       +   P   + + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTMDGELYTFGECENGKLGLPEELLINHKTPQLVTRIPE-KVIQVACGGGHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E + PK +E   ++  +   +SCG  H+A++TE
Sbjct: 256 VVLT-ETIVYTFGLGQFGQLGLGTFIFETSEPKAIE--YIKDHKISSISCGENHTALITE 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSL-VPIHGFLPRNIACGWWHTLLLA 462
            G++ ++G  +YG+LGLG  +  ++ +P+L      F+ + +ACG  H ++ A
Sbjct: 313 LGRMYTFGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACGGCHMVIFA 365



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+AVVT    L  FG   +GQ G GS     +P+   +L   +V+ +A G  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  + EG VY  GGN  GQLG G  +  N    + +      + K +S G+  SA LTE+
Sbjct: 100 LVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPI-SFFTSQHKIKQLSAGSNTSAALTEN 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     I+CG++H+  + 
Sbjct: 159 GELFMWGDNSEGQIGLKNVTNVCVPHQVTI-GKPISWISCGYYHSAFVT 206



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 122/303 (40%), Gaps = 85/303 (28%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
            G   + A +E+G+L  WG  + EGQ  L +  +   P    +    S +  + G+ H  
Sbjct: 147 AGSNTSAALTENGELFMWGD-NSEGQIGLKNVTNVCVPHQVTIGKPISWI--SCGYYHSA 203

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
            VT  GE+YT+G  EC        + G  G            LP            EE++
Sbjct: 204 FVTMDGELYTFG--EC--------ENGKLG------------LP------------EELL 229

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
              KT                    P LVT  P  K+ +VA GG HT++L++   V+ +G
Sbjct: 230 INHKT--------------------PQLVTRIPE-KVIQVACGGGHTVVLTET-IVYTFG 267

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
            G  GQLGLG+ I     P  I  +      KD                    +  I+CG
Sbjct: 268 LGQFGQLGLGTFIFETSEPKAIEYI------KDHK------------------ISSISCG 303

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVC 355
             H+A++T+ G + TFG G YG+ G G  N  +Q  P+     +   ++ +A G  H V 
Sbjct: 304 ENHTALITELGRMYTFGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACGGCHMVI 363

Query: 356 ISV 358
            + 
Sbjct: 364 FAT 366


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCNKQASPQLIKSLTGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 172/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG       +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------TGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V  + F 
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF- 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+AAG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 158/377 (41%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  ++  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +VAAGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 135/282 (47%), Gaps = 42/282 (14%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG---LGSRI 250
           SG E  +  P L+      K+  V+ G  H+L + + G+V+ WG G  GQLG   LG R 
Sbjct: 75  SGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDR- 133

Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
                  LIP                  ++N+  K     V ++ACG  HS  +T+ G +
Sbjct: 134 -------LIP-----------------KTINALSKYK---VIQVACGHDHSIALTNDGRI 166

Query: 311 LTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
            ++G  ++GQ G G   + Q  P   S+L  I + Q+AAG  H+  +S+ G VY +G N 
Sbjct: 167 FSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNN 226

Query: 370 FGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             QLG +     E + K      L S     VSCGA H+AVLT++G V ++G +  GQLG
Sbjct: 227 AHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLG 286

Query: 429 LGDSIDRNIPSLVP-----IHGFLPRNIACGWWHTLLLAETT 465
              S   + P   P     I G +   +ACG +HTL+   T+
Sbjct: 287 RNSS---SSPKFGPQKVEWIDGPVSL-LACGSYHTLVRISTS 324



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 116/264 (43%), Gaps = 44/264 (16%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT--------PHLIPCLEHA 265
           +  VA G RHTL+L D G V   G    GQLG     + +P+        P LI  LE  
Sbjct: 39  VVLVACGERHTLLLRDDGGVASCGDNSRGQLG-----RRLPSGQEKRSYGPELIQALETQ 93

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                                    V  ++CG  HS  V + G + ++G G +GQ G G 
Sbjct: 94  K------------------------VVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGE 129

Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVP 384
             D+L P   ++L   +V Q+A G  H++ ++ +GR++ +G N  GQLG G D  ++  P
Sbjct: 130 LGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASP 189

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP----SL 440
           +  +   L+      V+ G  HS  L+  G V  WG N   QLGL  +  +       S+
Sbjct: 190 Q--QVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSI 247

Query: 441 VPIHGFLPRNIACGWWHTLLLAET 464
             +       ++CG  HT +L + 
Sbjct: 248 AALRSLDVAFVSCGAEHTAVLTQN 271



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 48/233 (20%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P  +      K+ +VA G  H++ L++ G+++ WG    GQLGLG  I    +P  + 
Sbjct: 134 LIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVS 193

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L+                           + ++A GG HS  ++ +G  + +GWG    
Sbjct: 194 ALDGIP------------------------LAQVAAGGAHSFALSLSG--VVYGWGRNNA 227

Query: 321 CGHGSTNDQ-----LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
              G +  +      +P   ++L  + V  ++ G  HT  ++  G VY FG +  GQLG 
Sbjct: 228 HQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGR 287

Query: 376 GVDQAENVPKL-------LETPILESKRAKVVSCGARHSAV-LTEDGQVLSWG 420
               + + PK        ++ P+       +++CG+ H+ V ++  GQ+LS+G
Sbjct: 288 N---SSSSPKFGPQKVEWIDGPV------SLLACGSYHTLVRISTSGQLLSFG 331



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 25/182 (13%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP  V+   G+ + +VAAGG H+  LS  G V+GWG     QLGL               
Sbjct: 188 SPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGL--------------- 232

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
               +  K +  + +  S+     A RS  V  ++CG  H+AV+T  G++ TFG    GQ
Sbjct: 233 ----SQAKPKEQIFKPYSI----AALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQ 284

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT-VCISVEGRVYVFGGNQFGQLGTGVDQ 379
            G  S++           +D  V  +A G +HT V IS  G++  FG     +  +G  Q
Sbjct: 285 LGRNSSSSPKFGPQKVEWIDGPVSLLACGSYHTLVRISTSGQLLSFGRGPLQRNRSGTTQ 344

Query: 380 AE 381
           ++
Sbjct: 345 SK 346


>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
          Length = 1365

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 38/262 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPC 261
           P   T N G+K   V+ G  H   ++    V+  G    GQLG+G   +KM  +P L+  
Sbjct: 109 PRYCTYNIGIKY--VSCGDEHAAFITTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVEA 166

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           L        +P+                    IACG  H+ V T+ G + ++G G++G  
Sbjct: 167 L-----MDQKPI-------------------SIACGANHTLVCTERGDVYSWGQGIFGAL 202

Query: 322 GHGSTNDQLRP-----SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           G G+ +DQ  P     S+       Q+ Q++AG+  +  +   GRVY  G N  GQLG G
Sbjct: 203 GAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQNDAGQLGIG 262

Query: 377 VDQAENVP-KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
               EN+P  + + P    +R  +++CG  H  +LT+ G V S G N +GQLGL +  + 
Sbjct: 263 GRDQENIPISIKKFP----ERVSMIACGQMHLLMLTKQGTVYSCGANSFGQLGLNNKRNS 318

Query: 436 NIPSLVPIHGFLP-RNIACGWW 456
           + P L+     +P R +A G +
Sbjct: 319 SSPLLIQDISHIPMRYVAAGSF 340



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 121/297 (40%), Gaps = 47/297 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP LV      K   +A G  HTL+ ++ G V+ WG G  G LG G+ +     P LI  
Sbjct: 160 SPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGALGAGN-LDDQFLPKLIHI 218

Query: 262 LEHAASGKDRPLLVRQGSVNSS--GKAGRSY----------------------------- 290
                S K + + V  G   S+   ++GR Y                             
Sbjct: 219 SHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQNDAGQLGIGGRDQENIPISIKKFPE 278

Query: 291 -VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
            V  IACG  H  ++T  G + + G   +GQ G  +  +   P     +  I +  +AAG
Sbjct: 279 RVSMIACGQMHLLMLTKQGTVYSCGANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAG 338

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSA 408
            +        G +Y++G   FG+  T        P  ++T     K   V VS G     
Sbjct: 339 SFSASISYDSGDLYLWGSGVFGEFLT--------PHRVKTI----KGMTVSVSIGNHFGI 386

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            + +DG V SWG N  G+LG GD  +R  P ++  ++  +   ++CG   ++ L +T
Sbjct: 387 AVNQDGIVYSWGHNNSGELGQGDFDERPTPQIINQLNDKIVTLVSCGRNFSIALGQT 443



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 11/138 (7%)

Query: 313 FGWG--LYGQCGHGSTNDQLRPSY---ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           F WG    GQ G G +  Q+  SY        +I ++ ++ G  H   I+    VY  G 
Sbjct: 85  FSWGSDQAGQLGLGQS--QIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGS 142

Query: 368 NQFGQLGTG--VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           N  GQLG G    + +N P L+E   L  ++   ++CGA H+ V TE G V SWG   +G
Sbjct: 143 NTNGQLGVGDMSLKMKNSPMLVEA--LMDQKPISIACGANHTLVCTERGDVYSWGQGIFG 200

Query: 426 QLGLGDSIDRNIPSLVPI 443
            LG G+  D+ +P L+ I
Sbjct: 201 ALGAGNLDDQFLPKLIHI 218


>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
           garnettii]
          Length = 551

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  +  IA G   ++ +   G V+V+G N  G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 294 KSNQSYPTPVVV 305



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          +  IACG   S  V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------IVTIACGQMCSMAVVDTGEVFVWGYNGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 235 GQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPIL--ESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP++  + +  ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQSYP----TPVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 98  KKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVIVTIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  + + G+V  WG+N  GQLGLG S ++  P  +  + G   + +ACG+ HTL+L +  
Sbjct: 217 SMAVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
           G G    LAT+E G++ TWG       S L +G       P  + T  S   V++ A G 
Sbjct: 106 GSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
            H + +T  GEV+ WG+              ++G     ST  Q  +P         +  
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVI 207

Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
             +   +  S A  ++                 +SG++    +PC +    G+++ +VA 
Sbjct: 208 VTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQ---PTPCRIAALQGIRVQRVAC 264

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           G  HTL+L+D GQV+ WG    GQLG G++     PTP ++
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 305



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K +    CG   ++A  ++G++  WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGY- 231

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q++ G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D + +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 168/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +V+ G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       ++CG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQ---IVQVSCGYYHSLALSKASEV 158


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 132/272 (48%), Gaps = 34/272 (12%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R          
Sbjct: 3781 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 3831

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
            PC        DRP ++         ++ R   V +IA GG HSA +T AG L T+G G Y
Sbjct: 3832 PC--------DRPRVI---------ESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRY 3874

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            G+ GHG + DQL+P    +L   +V  IA  +G   T+C++ +  V+ +G   +G+LG G
Sbjct: 3875 GRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3934

Query: 377  VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  VP  +++  L       V CG++ S  LT+ G V +WG   Y +LG G      
Sbjct: 3935 GSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3992

Query: 437  IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P  V  + G     IA G  H +   E  ++
Sbjct: 3993 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 4024



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 133/306 (43%), Gaps = 82/306 (26%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            N  VK   V +GGRH + L+  G+++ WG G +G+LG  SR+                  
Sbjct: 2796 NYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNC---------------- 2839

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             D+P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    
Sbjct: 2840 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT 2890

Query: 329  QLRPSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--- 383
            QL+P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+   
Sbjct: 2891 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 2950

Query: 384  -------------------------------------------------PKLLETPILES 394
                                                             P+++E   L  
Sbjct: 2951 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG--LRG 3008

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
            K+   V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +AC
Sbjct: 3009 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3068

Query: 454  GWWHTL 459
            G  H++
Sbjct: 3069 GSSHSV 3074



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 141/349 (40%), Gaps = 69/349 (19%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 3796 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGA 3855

Query: 157  QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             SA  T         A  ++    K    R        GD    L P LV    G ++  
Sbjct: 3856 HSACIT---------AAGDLYTWGKGRYGRL-----GHGDSEDQLKPKLVEALQGYRVID 3901

Query: 217  VA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
            +A  +G   TL L+D   VW WG G  G+LG G                  + G   P+ 
Sbjct: 3902 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVPM- 3943

Query: 275  VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
                 ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP  
Sbjct: 3944 ----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 3996

Query: 335  ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
               L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L+ 
Sbjct: 3997 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--LQG 4054

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 4055 KKINRVACGSAHT---------LAWSTSKPANAG-------KLPTQVPM 4087



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 130/274 (47%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C   AA    RP+ +  G     +V + 
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----CEALAAL---RPIQLIGGEQTLFAVTAD 3757

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 3758 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3817

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  IAAG  H+ CI+  G +Y +G  ++G+L
Sbjct: 3818 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRL 3877

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G G  + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 3878 GHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3935

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 3936 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3969



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
             GG     A +  GK+   G A        T+G+ G   +    P+P + +     VVK 
Sbjct: 2750 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 2801

Query: 110  AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
             A   G  H +++T  G++++WG            D G  G F + +  K   +   +  
Sbjct: 2802 VAVHSGGRHAMALTVDGKIFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 2851

Query: 167  PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
                 A         TSS         E      GD    L P +V +  G ++ +VA G
Sbjct: 2852 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 2911

Query: 221  GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             R   TL L+D G V+ WG G  G+LG G                  + G + P  + + 
Sbjct: 2912 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 2953

Query: 279  SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
             +N  G      V +I CG + S  +T +G + T+G G Y + GHG+     +P     L
Sbjct: 2954 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL 3006

Query: 339  MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
               ++  +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++  
Sbjct: 3007 RGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3064

Query: 399  VVSCGARHSAVLT 411
             V+CG+ HS   T
Sbjct: 3065 RVACGSSHSVAWT 3077



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K A+G      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2691 NTGSLIRKKASGLESAATIR--TKVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2741

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2742 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 2781

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L +  V+++A  +G  H + ++V+G+++ +G    G+LG       + 
Sbjct: 2782 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDK 2841

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA +T  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 2842 PRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 2899

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 2900 LLGHRVIQVACGSRDAQTLALTDE 2923



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 30/163 (18%)

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV------- 364
             GWGL G   + +    + P     L ++ + QIA      + +S  GRVY+       
Sbjct: 340 VIGWGLIGWKYYANV---IGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDT 396

Query: 365 -----------------FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
                            +G   +G+LG G       PKL+E   L+      V CG++ S
Sbjct: 397 LVGVVAVFSLIFGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK--LQDLDVVKVRCGSQFS 454

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPR 449
             LT+DGQV SWG     +LG G       P L+  +   LP+
Sbjct: 455 VALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQATLPQ 497



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 3959 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4017

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4018 CTEDGEVYTWG 4028



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 43/81 (53%)

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G + ++G G YG+ G G ++    P     L D+ V ++  G   +V ++ +G+VY +G 
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468

Query: 368 NQFGQLGTGVDQAENVPKLLE 388
               +LG G ++    PKLLE
Sbjct: 469 GDNQRLGHGTEEHVRYPKLLE 489



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 53   KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
            K     G    LA S  G++ +WG A+D        GK G    +P   P   E+     
Sbjct: 3795 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 3846

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV  AAG AH   +T AG++YTWG
Sbjct: 3847 VVDIAAGGAHSACITAAGDLYTWG 3870


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD---QA--ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D   QA  + +  LL  P ++      ++ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCKKQASPQLIKSLLGIPFMQ------IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 172/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L             EE ++  +   +  +                       
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ +IA GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V  + F 
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF- 346

Query: 448 PRNIAC 453
           P N  C
Sbjct: 347 PYNGQC 352



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 143/266 (53%), Gaps = 26/266 (9%)

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            H++ L++ G+V+ WG G  G+LG G+  +    P  I  L+    G++   + R  +  +
Sbjct: 1218 HSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQ----GEEVVQVGRGRAAGA 1272

Query: 283  SGKAGRSYVK---EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                 RS++    +++CG +HSAVVT  G L TFG G YG+ G G+T+++  P   ++L 
Sbjct: 1273 GLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALE 1332

Query: 340  DIQVEQ---IAAGLWHTVCISVEG-RVYVFGGNQFGQLGTGVDQAENVPK----LLETPI 391
              Q+ Q   +A GL HT+ +S +G  V+ FG   +G+LG G   A++ P+    +L++P 
Sbjct: 1333 GYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPT 1392

Query: 392  LESK---------RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            L  +           K V+CG + S  LT+DG+V ++G ++   L    + + N P  +P
Sbjct: 1393 LCQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLP 1452

Query: 443  -IHGFLPRNIACGWWHTLLLAETTQI 467
             + G   +++A G  HTL L+ T  +
Sbjct: 1453 ALSGVHVQDVAVGAEHTLALSSTGDV 1478



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 173/413 (41%), Gaps = 89/413 (21%)

Query: 55   VCGGGCGFA-------LATSE-SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV 106
            VCG  C F        LA  E S   +  G++DD     + S   G             +
Sbjct: 1158 VCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFV--------VTQL 1209

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
            V +     H +++TE+GEV++WG            D+G  G    D   +   +   Q  
Sbjct: 1210 VTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSDRQRRPRQIEALQ-- 1257

Query: 167  PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
                  GEEVV+  +  +A        +G     L  C   L+  ++++    G +H+ +
Sbjct: 1258 ------GEEVVQVGRGRAA-------GAG-----LCRCRSHLHLRLQMS---CGFKHSAV 1296

Query: 227  LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
            ++  G+++ +G G  G+LGLG+       P  +  LE    G+                 
Sbjct: 1297 VTADGKLFTFGNGDYGRLGLGNTSNK-KLPERVAALEGYQIGQ----------------- 1338

Query: 287  GRSYVKEIACGGRHSAVVTDAGALL-TFGWGLYGQCGHGSTNDQLRPSYASSLMD----- 340
                V  +ACG  H+ VV+  G ++  FG G YG+ G G++  +  P   + ++      
Sbjct: 1339 ----VANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLC 1394

Query: 341  ----------IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
                      I ++++A G   +V ++ +GRV+ FG ++   +G    +A N  +  + P
Sbjct: 1395 QELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRL--IGLPESRARNHNRPQQLP 1452

Query: 391  ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
             L     + V+ GA H+  L+  G V +WG N  GQLGLG +     P++V +
Sbjct: 1453 ALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTM 1505



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 9/110 (8%)

Query: 362  VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
            V+++G  + GQL    +   N+  L+ T      +A+ V CG   + V+  +G VL+ G 
Sbjct: 1124 VFLWGAGRHGQLA---EAGRNI--LVPTTAPSFSQAQQVVCGQNCTFVIQPNGTVLACGE 1178

Query: 422  NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI--ACGW-WHTLLLAETTQI 467
              YG+LG G+S D ++ +++  + GF+   +  +CG   H++ L E+ ++
Sbjct: 1179 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 1228


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G  H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG+ H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYCHSLALSKASEV 158



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYCHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V +IACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 39/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           GV I+ VA G  HT  +S  GQ++ +G G  G LG G+ ++ V  P  +  L+       
Sbjct: 411 GVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGN-LQSVSHPKEVESLKGL----- 464

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA-----------GALLTFGWGLYG 319
                              +VK +ACG  H+A + D            G L T+G G  G
Sbjct: 465 -------------------WVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKG 505

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GH     +L+P+  + L++    Q++ G   TV ++  G++Y  G +  GQLG    Q
Sbjct: 506 RLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGN--PQ 563

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           A+N    +    L+ +  K +S G+ H A LT  G V +WG    GQLGLG+  DRN+P+
Sbjct: 564 AKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPT 623

Query: 440 LV-PIHGFLPRNIACG 454
           LV  +     ++IACG
Sbjct: 624 LVEALRDRQVQSIACG 639



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 8/179 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ I+ G  H+A++T  G +  +G G  G+ GH    D   P+   SL    V+ +A G 
Sbjct: 307 VRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLDGFLVKFVACGE 366

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN----VPKLLETPILESKRAKVVSCGARH 406
           + T  ++  G ++V+G N++G  G  V +       +P+ +  P L       V+CG  H
Sbjct: 367 YQTCALTDSGELFVWGENKYG--GNLVCEERTGSQWLPRQISGP-LAGVSISNVACGDWH 423

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           +A ++  GQ+ ++G   +G LG G+    + P  V  + G   +++ACG WHT  + + 
Sbjct: 424 TAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVACGSWHTAAIVDV 482



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P      + + V  I+ G  H   I+  G V+ +G    G+LG  VD   + P ++
Sbjct: 292 DSLLPKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIV 351

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS------IDRNIPSLV 441
           E+  L+    K V+CG   +  LT+ G++  WG NKYG   + +       + R I    
Sbjct: 352 ES--LDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISG-- 407

Query: 442 PIHGFLPRNIACGWWHTLLLAETTQI 467
           P+ G    N+ACG WHT  ++ + Q+
Sbjct: 408 PLAGVSISNVACGDWHTAAVSSSGQL 433



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 38/192 (19%)

Query: 211 GVKITKVAAGGRHTLILSDM-----------GQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           G+ +  VA G  HT  + D+           G+++ WG G +G+LG     K +    + 
Sbjct: 463 GLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVA 522

Query: 260 PCLEH----AASGKDRPL-LVRQGSVNS----------------------SGKAGRSYVK 292
             +EH     + G+   + L R G + +                       GK    +VK
Sbjct: 523 QLVEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKNKSIAIVEGKLKEEFVK 582

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           EI+ G  H A +T  G++ T+G G  GQ G G+  D+  P+   +L D QV+ IA G   
Sbjct: 583 EISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNL 642

Query: 353 TVCISVEGRVYV 364
           T  I +   + V
Sbjct: 643 TAAICLHKSISV 654


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 124/260 (47%), Gaps = 32/260 (12%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
            +++  V+ G  H+L +   G+V+ WG G EGQLG+G   ++    +LIP      +G  
Sbjct: 74  NLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEI----NLIPTKIKTLTGIK 129

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQ 329
                               + +++CG  HS  +++ G + ++G   +GQ G G     Q
Sbjct: 130 --------------------IIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQ 169

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
             P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL     +  NVP     
Sbjct: 170 ASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLAL---RQNNVPVQSHK 226

Query: 390 P----ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG 445
           P     L++     +SCG  H+AVLT+ G+V ++G N YGQLG   + ++  P LV    
Sbjct: 227 PRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGID 286

Query: 446 FLPRNIACGWWHTLLLAETT 465
            L   I CG +HTL    TT
Sbjct: 287 GLVSQIDCGSYHTLAYVYTT 306



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 55/274 (20%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G ++ + A+G RH+L+L   G++   G   +GQLG    ++    P  I  L++      
Sbjct: 22  GAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKG-VQRDEHPKRIRTLDNLR---- 76

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-Q 329
                               V  ++CG  HS  V   G +  +G G  GQ G G   +  
Sbjct: 77  --------------------VDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEIN 116

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD---QA--ENVP 384
           L P+   +L  I++ Q++ G +H++ +S  G+V+ +G N  GQLG G +   QA  + V 
Sbjct: 117 LIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVR 176

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
            L   P+ +      V+ G  HS  L+  G    WG N  GQL L  +        VP+ 
Sbjct: 177 SLDGIPLTQ------VAAGGAHSFALSLSGASFGWGSNNAGQLALRQNN-------VPVQ 223

Query: 445 GFLPRNI-----------ACGWWHTLLLAETTQI 467
              PR+I           +CG+ HT +L +T ++
Sbjct: 224 SHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKV 257



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 86/199 (43%), Gaps = 33/199 (16%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
            L P  +    G+KI +V+ G  H+L LS+ GQV+ WG    GQLGLG       +P   
Sbjct: 116 NLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRV 175

Query: 259 -----IPCLEHAASGKDR------------------PLLVRQGSVNSSGKAGRSY----- 290
                IP  + AA G                      L +RQ +V       RS      
Sbjct: 176 RSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKN 235

Query: 291 --VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
             V  I+CG  H+AV+T  G + TFG   YGQ GH  T ++  P     + D  V QI  
Sbjct: 236 LGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGI-DGLVSQIDC 294

Query: 349 GLWHTVC-ISVEGRVYVFG 366
           G +HT+  +   G+V  FG
Sbjct: 295 GSYHTLAYVYTTGKVVSFG 313


>gi|37360404|dbj|BAC98180.1| mKIAA1470 protein [Mus musculus]
          Length = 484

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H A  
Sbjct: 109 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEALSHEA-- 165

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +TD G++  FG    GQ G G+  D
Sbjct: 166 ----------------------IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTD 203

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 204 AV-PSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 262

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 263 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 322

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 323 RLGHAEQKDEMVPRLVKLFDF 343



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 68/335 (20%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L+D G V+ +G    GQLG
Sbjct: 138 RNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLG 197

Query: 246 LGSRIKMVPTPHLI-----PCLEHAASGKDRPLLVRQGSV-------------NSSGK-- 285
           LG++   VP+P  I     P  + A   +   L+  +G++             NS GK  
Sbjct: 198 LGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFI 257

Query: 286 -------------------------------AGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                               V+++ACG  H+ V+     + ++G
Sbjct: 258 ARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWG 317

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G YG+ GH    D++ P     L D       QI AG   +  +S  G ++ +G     
Sbjct: 318 FGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTS 376

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN-KYGQLGLG 430
           +      ++   PK ++   L   R + ++CG + S ++  D   +SWG +  +G+LG G
Sbjct: 377 R------ESTMYPKAVQD--LCGWRIRSLACG-KSSIIVAADESTISWGPSPTFGELGYG 427

Query: 431 DSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLA 462
           D   ++  +   +  + G     +A G+ H+L++A
Sbjct: 428 DHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIA 462


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 128/261 (49%), Gaps = 33/261 (12%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI--KMVPTPHLIPCLEHAASG 268
           G ++  V     HT I+ D G ++  G    GQLGLG     ++VP P     +E+    
Sbjct: 172 GKRVADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRP-----VEYFFR- 225

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             RP+L                   +ACG  ++      G ++ FG   +GQ G  ST++
Sbjct: 226 --RPVLA------------------VACGQHYTIASLRDGGVVAFGKNDHGQLGLDSTSE 265

Query: 329 QL-RPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
            + +P+  ++ +D + V Q++ G  HT  ++ +G VY FG N +GQLG G       P  
Sbjct: 266 PVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPAR 325

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHG 445
           +E+  L   R   V+CG  H+ VL++DG+V  +G N +GQLGL  S+D   P L+  +  
Sbjct: 326 VES--LARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRN 383

Query: 446 FLPRNIACGWWHTLLLAETTQ 466
                +A G++H++ L   T+
Sbjct: 384 KTVTKVAAGFYHSVCLVGPTE 404



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 132/332 (39%), Gaps = 80/332 (24%)

Query: 193 ASGDEFFTLSPCLVTL---NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
           A GD     +P  V L   N G ++  VA G   T IL + G V+  GY   GQ  +G+ 
Sbjct: 45  ALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVYTCGYNDSGQCAIGT- 103

Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
            + VPT    P L       +R + +  G+                 G  H A +   G 
Sbjct: 104 TERVPTLRFSPGLS-----SNRTVRIFSGN-----------------GSEHLAALHANGN 141

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           L T G+ + GQ G GS+   +  +    L   +V  +    +HT  +   G +Y  G N 
Sbjct: 142 LYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYACGCND 201

Query: 370 FGQLGTGVDQ-AENVPKLLE---------------------------------------- 388
           +GQLG G  +  E VP+ +E                                        
Sbjct: 202 YGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKNDHGQLGLD 261

Query: 389 ---TPILESKRAKV---------VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
               P+ +  R            +SCG  H+AV+TEDG V ++G N YGQLGLG  +   
Sbjct: 262 STSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMA 321

Query: 437 IPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            P+ V  +       +ACG +HTL+L++  ++
Sbjct: 322 RPARVESLARMRITQVACGCYHTLVLSDDGKV 353



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           V +   + +FG   YG+   G T D+   +R    +S    +V  +A G   T  +  +G
Sbjct: 27  VLEVEGVYSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDG 86

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR-AKVVS-CGARHSAVLTEDGQVLS 418
            VY  G N  GQ   G    E VP L  +P L S R  ++ S  G+ H A L  +G + +
Sbjct: 87  DVYTCGYNDSGQCAIGT--TERVPTLRFSPGLSSNRTVRIFSGNGSEHLAALHANGNLYT 144

Query: 419 WGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            G+N  GQLGLG S      +LV  + G    ++ C ++HT ++ + 
Sbjct: 145 VGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDN 191



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 5/61 (8%)

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI----HGFLPRNIACGWWHTLLLA 462
           S VL  +G V S+G N YG+L LGD+ DR+ P  V +    HG    ++ACG   T +L 
Sbjct: 25  SDVLEVEG-VYSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILF 83

Query: 463 E 463
           E
Sbjct: 84  E 84


>gi|224087464|ref|XP_002308175.1| predicted protein [Populus trichocarpa]
 gi|222854151|gb|EEE91698.1| predicted protein [Populus trichocarpa]
          Length = 134

 Score =  109 bits (272), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/60 (75%), Positives = 57/60 (95%)

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           ++++P+LL+ P LESK+AK+VSCGARHSA+LTEDGQV SWGWNK+GQLG+GDS+DRNIPS
Sbjct: 75  SQSIPRLLDAPCLESKQAKMVSCGARHSAILTEDGQVFSWGWNKHGQLGVGDSMDRNIPS 134



 Score = 45.8 bits (107), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 29/42 (69%)

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           K ++CG RHSA++T+ G + ++GW  +GQ G G + D+  PS
Sbjct: 93  KMVSCGARHSAILTEDGQVFSWGWNKHGQLGVGDSMDRNIPS 134



 Score = 42.0 bits (97), Expect = 0.62,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 5/55 (9%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
           +PCL +    +    V+ G RH+ IL++ GQV+ WG+   GQLG+G  + + +P+
Sbjct: 84  APCLESKQAKM----VSCGARHSAILTEDGQVFSWGWNKHGQLGVGDSMDRNIPS 134


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 130/279 (46%), Gaps = 32/279 (11%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG---LGSRIKMVPTPHLIPCLEHAASGK 269
            + ++A G  +T+ ++  G+V+  G    GQLG      R++++P           A G 
Sbjct: 35  NVEQIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARKRLQLIPGLDAF-VFRKIACGN 93

Query: 270 DRPLLVRQ-----------------GSVNSSGKA-------GRSYVKEIACGGRHSAVVT 305
              L V +                  SV+ + +        G + + +IACG  HS  +T
Sbjct: 94  CHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALT 153

Query: 306 DAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
           + G L  +G    GQ G GS T  +++P   S+L  + +  IA G +HT+ IS  G V+ 
Sbjct: 154 NDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFS 213

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G N FGQLG    Q  N+P  L T  L + +    +CG   S  LT DG V + G   Y
Sbjct: 214 WGRNTFGQLGLNDVQQRNLPCQLRT--LRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMY 271

Query: 425 GQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLA 462
           GQLG G++ +  +P  ++ + G     I+CG  HTL L 
Sbjct: 272 GQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALV 310



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 98/179 (54%), Gaps = 7/179 (3%)

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           S V++IACG  ++  +T  G + + G   YGQ GH     +L+      L      +IA 
Sbjct: 34  SNVEQIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARKRLQ--LIPGLDAFVFRKIAC 91

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
           G  HT+ ++  G+++ +G N  GQLG   VD  E VP++++  +L +     ++CG  HS
Sbjct: 92  GNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIK--VLGTNVIVQIACGTEHS 149

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVPIHGFLP-RNIACGWWHTLLLAET 464
             LT DG++ +WG N+ GQLGLG      I P  +     +P   IACG +HT++++++
Sbjct: 150 IALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKS 208



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 154/386 (39%), Gaps = 87/386 (22%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG  + +A ++ GK+ + G+ +D GQ  L   K  +  +  P        K A G  H 
Sbjct: 40  ACGENYTVAITKEGKVYSCGN-NDYGQ--LGHEKARKRLQLIPGLDAFVFRKIACGNCHT 96

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           ++V E G++++WG   C  + ++               G  S   TE+ P   K  G  V
Sbjct: 97  LAVNEWGQLFSWG---CNMNGQL---------------GLNSVDCTERVPRMIKVLGTNV 138

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
                                                I ++A G  H++ L++ G+++ W
Sbjct: 139 -------------------------------------IVQIACGTEHSIALTNDGELYAW 161

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G   EGQLGLGS       P  I  L                            +  IAC
Sbjct: 162 GSNREGQLGLGSYTTTEIKPKRISTLAAVP------------------------IAFIAC 197

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           GG H+ V++ +GA+ ++G   +GQ G      +  P    +L + +V     G   +V +
Sbjct: 198 GGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFL 257

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQ 415
           +++G V+  G   +GQLG G    E +P+  +   L       +SCG RH+ A++   G+
Sbjct: 258 TMDGGVFTCGAGMYGQLGHGNTTNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGR 315

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV 441
           V +WG    GQLG   S     P +V
Sbjct: 316 VYAWGLGGAGQLGNRASQSATTPQVV 341



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 132/338 (39%), Gaps = 84/338 (24%)

Query: 52  WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAA 110
           ++ +  G C   LA +E G+L +WG  +  GQ  L S    E  P    +     +V+ A
Sbjct: 86  FRKIACGNCH-TLAVNEWGQLFSWG-CNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIA 143

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
            G  H +++T  GE+Y W                  GS ++   G  S   TE  P    
Sbjct: 144 CGTEHSIALTNDGELYAW------------------GSNREGQLGLGSYTTTEIKP---- 181

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
                  KR  T +A                          V I  +A GG HT+++S  
Sbjct: 182 -------KRISTLAA--------------------------VPIAFIACGGYHTIVISKS 208

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G V+ WG    GQLGL                      ++ P  +R     +   A   Y
Sbjct: 209 GAVFSWGRNTFGQLGLND-----------------VQQRNLPCQLR-----TLRNAKVCY 246

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
                CG   S  +T  G + T G G+YGQ GHG+T +++ P     LM   V QI+ G 
Sbjct: 247 A---TCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQISCGK 303

Query: 351 WHTV-CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
            HT+  +   GRVY +G    GQLG    Q+   P+++
Sbjct: 304 RHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVV 341



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 12/157 (7%)

Query: 313 FGWG--LYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           F WG  ++G+ G G   D+    P     +    VEQIA G  +TV I+ EG+VY  G N
Sbjct: 2   FCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGNN 61

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            +GQLG   ++A    +L+  P L++   + ++CG  H+  + E GQ+ SWG N  GQLG
Sbjct: 62  DYGQLGH--EKARKRLQLI--PGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLG 117

Query: 429 LGDSID--RNIPSLVPIHGF-LPRNIACGWWHTLLLA 462
           L +S+D    +P ++ + G  +   IACG  H++ L 
Sbjct: 118 L-NSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALT 153



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           ++ +G    G+LG G  + EN+    E   +E+   + ++CG  ++  +T++G+V S G 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60

Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           N YGQLG   +  R    L+P +  F+ R IACG  HTL + E
Sbjct: 61  NDYGQLGHEKA--RKRLQLIPGLDAFVFRKIACGNCHTLAVNE 101


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 128/255 (50%), Gaps = 38/255 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++  +A G  H+ + +  G+++ +G G  G LG G R K V +P  +  L        
Sbjct: 371 GLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDR-KSVSSPKELQSLN------- 422

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA----------LLTFGWGLYGQ 320
                           G   +K +ACG  H+A + +  +          L T+G G   +
Sbjct: 423 ----------------GLKTIK-VACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHR 465

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG+ +  L P+  SSL+D   +Q+A G   TV ++  G V+  GG+ +GQLG      
Sbjct: 466 LGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSNG 525

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           + +P L++  ++  +  + +SCGA H+AVLT   +V +WG    GQLG GD+ DR +P+L
Sbjct: 526 K-IPCLVQDRLV-GEFVEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKLPTL 583

Query: 441 V-PIHGFLPRNIACG 454
           V  +     +N++CG
Sbjct: 584 VEALKERHVKNLSCG 598



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V +I+CG RH A+VT  G + T+G    G+ GHG  +    P    SL    ++ +A G 
Sbjct: 267 VHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGE 326

Query: 351 WHTVCISVEGRVYVF--GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  IS  G ++ +  G N  G LG G D +  +PK +  P LE  +   ++CG  HSA
Sbjct: 327 YHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGP-LEGLQVLSIACGTWHSA 385

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAE 463
           + T +G++ ++G   +G LG GD    + P  L  ++G     +ACG WHT  + E
Sbjct: 386 LATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKTIKVACGVWHTAAIVE 441



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 125/286 (43%), Gaps = 42/286 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE--GQLGLGSRIKMV 253
           ++ FT  P LV       I  VA G  HT  +S  G ++ WG G    G LG G+ +   
Sbjct: 302 EDHFT-HPKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVS-- 358

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
              H IP      SG   PL   Q             V  IACG  HSA+ T  G L TF
Sbjct: 359 ---HWIP---KRVSG---PLEGLQ-------------VLSIACGTWHSALATSNGKLFTF 396

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI---------SVEGR-VY 363
           G G +G  GHG       P    SL  ++  ++A G+WHT  I         ++  R ++
Sbjct: 397 GDGTFGALGHGDRKSVSSPKELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLF 456

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
            +G     +LG G   A  +P  + + I      + ++CG   +  LT  G V + G + 
Sbjct: 457 TWGDGDKHRLGHGNKDAYLLPTCVSSLI--DYNFQQLACGHTMTVALTTSGHVFTMGGSA 514

Query: 424 YGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
           YGQLG   S +  IP LV   + G     I+CG +HT +L   +++
Sbjct: 515 YGQLG-NPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEV 559



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 6/140 (4%)

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
           + ND L P    S + + V QI+ G+ H   ++ +G V+ +G    G+LG G++     P
Sbjct: 249 TKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHP 308

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW--GWNKYGQLGLGDSIDRNIPSLV- 441
           KL+E+  L       V+CG  H+  ++  G + +W  G N  G LG G  +   IP  V 
Sbjct: 309 KLVES--LAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVS 366

Query: 442 -PIHGFLPRNIACGWWHTLL 460
            P+ G    +IACG WH+ L
Sbjct: 367 GPLEGLQVLSIACGTWHSAL 386



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 39/227 (17%)

Query: 195 GDEFFTLSPC-LVTLNPGVKITKVAAGGRHTL----ILSDMG------QVWGWGYGGEGQ 243
           GD     SP  L +LN G+K  KVA G  HT     ++S  G      +++ WG G + +
Sbjct: 407 GDRKSVSSPKELQSLN-GLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHR 465

Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
           LG G++       +L+P    +    +                     +++ACG   +  
Sbjct: 466 LGHGNK-----DAYLLPTCVSSLIDYN--------------------FQQLACGHTMTVA 500

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           +T +G + T G   YGQ G+ S+N ++       L+   VE+I+ G +HT  ++    V+
Sbjct: 501 LTTSGHVFTMGGSAYGQLGNPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEVF 560

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            +G    GQLG G  +   +P L+E   L+ +  K +SCGA  ++ +
Sbjct: 561 TWGRGANGQLGHGDTEDRKLPTLVEA--LKERHVKNLSCGANFTSSI 605



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 143/369 (38%), Gaps = 62/369 (16%)

Query: 54  DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-----TPEPFPLPTEA-SVV 107
           D    G     A S SG L TWG  D    S L    HG       P+    P E   V+
Sbjct: 320 DYVACGEYHTCAISTSGDLFTWG--DGSNNSGLLG--HGTDVSHWIPKRVSGPLEGLQVL 375

Query: 108 KAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGKQ 157
             A G  H    T  G+++T+G           R+ V S K  +      + +       
Sbjct: 376 SIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKTIKVACGVWH 435

Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
           +A   E       ++G  +  R+  +    +      G++   L P  V+        ++
Sbjct: 436 TAAIVEVM----SQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQL 491

Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
           A G   T+ L+  G V+  G    GQLG  S      +   IPCL      +DR  LV +
Sbjct: 492 ACGHTMTVALTTSGHVFTMGGSAYGQLGNPS------SNGKIPCLV-----QDR--LVGE 538

Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
                       +V+EI+CG  H+AV+T    + T+G G  GQ GHG T D+  P+   +
Sbjct: 539 ------------FVEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKLPTLVEA 586

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           L +  V+ ++ G   T  I +    +V G +Q   + +G  QA    +         KR 
Sbjct: 587 LKERHVKNLSCGANFTSSICIHK--WVSGADQ--SVCSGCRQAFGFTR---------KRH 633

Query: 398 KVVSCGARH 406
              +CG  H
Sbjct: 634 NCYNCGLVH 642


>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
          Length = 1019

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 138/297 (46%), Gaps = 49/297 (16%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+L++ G+V+  G   EGQLGLG          I    +
Sbjct: 125 CVKALKPE-KVKFAACGRNHTLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPICFFTS 183

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H +  L  +A       L   G++     NS G+ G   V                 I+
Sbjct: 184 QHQLKQL--SAGSNTSAALTVDGNLFMWGDNSEGQIGLKNVPNVCVPHQVTVGKPIAWIS 241

Query: 296 CGGRHSAVVTDAGALLTFG------WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
           CG  HSA VT  G L TFG       GL  Q        QL P     ++     Q+A G
Sbjct: 242 CGYYHSAFVTMEGELYTFGETECGKLGLPRQLLMNHKVPQLVPGIPEKVI-----QVACG 296

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSA 408
             HTV ++ E  VY FG  QFGQLG G    E   PK+LE PI + K    +SCG  H+A
Sbjct: 297 GGHTVVLT-EKAVYTFGLGQFGQLGLGTFIFETAEPKILE-PIKDQKII-YISCGENHTA 353

Query: 409 VLTEDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           ++T+ G + ++G  ++G+LGLG  +  ++ IP+L      F+   +ACG  H ++ A
Sbjct: 354 LITDVGLMYTFGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACGGCHMIVFA 410



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 92/175 (52%), Gaps = 14/175 (8%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +ACG  H+A++T    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 85  LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHT 144

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLT 411
           + ++ EG+VY  GGN  GQLG G  +  N   P    T      + K +S G+  SA LT
Sbjct: 145 LVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPICFFT---SQHQLKQLSAGSNTSAALT 201

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSL-VPIHGFLPRNIA---CGWWHTLLLA 462
            DG +  WG N  GQ+GL     +N+P++ VP    + + IA   CG++H+  + 
Sbjct: 202 VDGNLFMWGDNSEGQIGL-----KNVPNVCVPHQVTVGKPIAWISCGYYHSAFVT 251



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 38/255 (14%)

Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
           T +A G  HT I++   +++ +G    GQLGLGSR   V  P  +  L        +P  
Sbjct: 83  TYLACGDEHTAIITGNNKLYMFGSNNWGQLGLGSR-STVSKPTCVKAL--------KP-- 131

Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ--LRP 332
                           VK  ACG  H+ V+T+ G +   G    GQ G G T D+    P
Sbjct: 132 --------------EKVKFAACGRNHTLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHP 177

Query: 333 -SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL-LETP 390
             + +S    Q++Q++AG   +  ++V+G ++++G N  GQ+G      +NVP + +   
Sbjct: 178 ICFFTSQH--QLKQLSAGSNTSAALTVDGNLFMWGDNSEGQIG-----LKNVPNVCVPHQ 230

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI--DRNIPSLVPIHGFLP 448
           +   K    +SCG  HSA +T +G++ ++G  + G+LGL   +  +  +P LVP      
Sbjct: 231 VTVGKPIAWISCGYYHSAFVTMEGELYTFGETECGKLGLPRQLLMNHKVPQLVPGIPEKV 290

Query: 449 RNIACGWWHTLLLAE 463
             +ACG  HT++L E
Sbjct: 291 IQVACGGGHTVVLTE 305



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 20/152 (13%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGS---TNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           G    VV D+GA+ TFG   + +         ND   P+Y           +A G  HT 
Sbjct: 47  GEPEEVVPDSGAVFTFGKTKFAENIPSKFWFKND--IPTY-----------LACGDEHTA 93

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
            I+   ++Y+FG N +GQLG G     + P  ++   L+ ++ K  +CG  H+ VLTE+G
Sbjct: 94  IITGNNKLYMFGSNNWGQLGLGSRSTVSKPTCVKA--LKPEKVKFAACGRNHTLVLTEEG 151

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
           +V + G N  GQLGLGD+ DRN  +  PI  F
Sbjct: 152 KVYAAGGNNEGQLGLGDTEDRN--TFHPICFF 181


>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
           catus]
          Length = 993

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 140/299 (46%), Gaps = 53/299 (17%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G+V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTEDGELFMWGDNSEGQIGLKDVTNVCVPQQVTVGKPISWIS 196

Query: 296 CGGRHSAVVTDAGALLTFG------WGLYGQ--CGHGSTNDQLRPSYASSLMDIQVEQIA 347
           CG  HSA VT  G L TFG       GL  Q  C H       R       +  +V Q+A
Sbjct: 197 CGYYHSAFVTTEGELYTFGEPESGKLGLPNQLLCNH-------RMPQPVPGIPEKVVQVA 249

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH 406
            G  HTV ++ E  VY FG  QFGQLG G    E +VPK++E   ++ ++   +SCG  H
Sbjct: 250 CGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLFETSVPKVIEH--VKDQKISSISCGENH 306

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           +A++T+ G + ++G  +YG+LGLG  +  ++ +P+L      F+ + ++CG  H L+ A
Sbjct: 307 TALITDIGLMYTFGDGRYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCGGCHMLVFA 365



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+AVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G+VY  GGN  GQLG G  +  N   L+ +      + K +S G+  SA LTED
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLI-SFFTSQHKIKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL D  +  +P  V + G     I+CG++H+  + 
Sbjct: 159 GELFMWGDNSEGQIGLKDVTNVCVPQQVTV-GKPISWISCGYYHSAFVT 206



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 29/153 (18%)

Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
           PG+  K+ +VA GG HT++L++   V+ +G G  GQLGLG+ +     P +I   EH   
Sbjct: 239 PGIPEKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKVI---EHVKD 294

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
            K                     +  I+CG  H+A++TD G + TFG G YG+ G G  N
Sbjct: 295 QK---------------------ISSISCGENHTALITDIGLMYTFGDGRYGKLGLGLEN 333

Query: 328 --DQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
             +Q  P+  S  +    + ++ G  H +  +V
Sbjct: 334 FTNQFLPTLCSHFLRFIAQLVSCGGCHMLVFAV 366



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 17/107 (15%)

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G V+ FG  +F         AEN+P        ++    V+SCG  H+AV+T + ++  +
Sbjct: 12  GAVFTFGKTRF---------AENIPSKF---WFKNDIPTVLSCGDEHTAVVTGNKKLYMF 59

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLLLAE 463
           G N +GQLGLG     + P+ V      P  +   ACG  HTL+  E
Sbjct: 60  GSNNWGQLGLGSKSTVSKPTCV--KALKPEKVKFAACGRNHTLVSTE 104


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 169/419 (40%), Gaps = 48/419 (11%)

Query: 40  SPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
           S IP ++ G    KDV     G   +L   + G +  WGS  D       +G++  +  P
Sbjct: 84  SIIPVKVKG---LKDVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEY--SIVP 138

Query: 98  FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK-VTRDFGSAGSFQ--KDST 154
             +     VV  AAG  + + + + G V+ WG  E +       +DF      +  KD  
Sbjct: 139 VQVKGLKDVVAIAAGDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKDVV 198

Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
              +      A   D        K       R         DE+   SP  V +     +
Sbjct: 199 AIAAGKDYSLALKKDGTVWMWEYKYNYYEQLRR------GADEY---SPVPVQVEGLKDV 249

Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---SRIKMVPTPHLIPCLEHAASGKDR 271
             +AAG  H+L L   G VW WG    GQLG G        V   +L   +  AA     
Sbjct: 250 VAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKDVVAIAAGENHS 309

Query: 272 PLLVRQGSV-----NSSGKAGRSY---------------VKEIACGGRHSAVVTDAGALL 311
             L + G++     N  G+ G S                V  IA G  HS  +   G + 
Sbjct: 310 LALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVW 369

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           ++G   YGQ G+G++ D   P     L D  V  IA G  H++ +  +G V+ +G N+FG
Sbjct: 370 SWGNNYYGQLGNGNSIDSYVPVQVRGLKD--VVAIATGNAHSLALKKDGTVWAWGNNEFG 427

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           QLG G +++  VP      +   K    ++ G+ HS    +DG V +WG N++GQLG G
Sbjct: 428 QLGNGTNKSSFVP----VQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNG 482



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 193/479 (40%), Gaps = 78/479 (16%)

Query: 10  ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC---GGDSWKDVCG--GGCGFAL 64
           EN  +   K+  ++ WG       E   + + I  +LC      S KDV     GC  +L
Sbjct: 306 ENHSLALKKDGTIWAWG-----DNEWGQLGNSISEKLCVPVQFKSLKDVVAIAAGCEHSL 360

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
           A  + G + +WG+ +  GQ  L +G   ++  P  +     VV  A G AH +++ + G 
Sbjct: 361 ALKKDGTVWSWGN-NYYGQ--LGNGNSIDSYVPVQVRGLKDVVAIATGNAHSLALKKDGT 417

Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---RAGEE---VVK 178
           V+ WG            +FG  G    + T K S +P +     D     AG +     K
Sbjct: 418 VWAWG----------NNEFGQLG----NGTNKSSFVPVQVKGLKDVVAIAAGSDHSLAFK 463

Query: 179 RRKTSSAREESE-----NPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQ 232
           +  T  A   +E     N + G   +   P  V    G+K +  VAAG  H+L L   G 
Sbjct: 464 KDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQV---KGLKDVVAVAAGSVHSLALKKDGT 520

Query: 233 VWGWGYGGEGQLGLGSRIKMVPT--PHLIPCLEHAASGKDRPLLVRQGSVNSSGKA---- 286
           +W WG    G LG       VP     L   +  AA      +L + G+V + G+     
Sbjct: 521 IWAWGSNYHGLLGNDIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVWAWGEVWFDL 580

Query: 287 -----------------GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND- 328
                            G   V  IA G  HS  +   G +  +G   +GQ G+      
Sbjct: 581 LNENSRLVYSSVPVQIKGLKDVVAIAAGEHHSLGLKKDGTVWAWGDNFFGQLGNSPREKY 640

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG---TGVDQAENVPK 385
            L P     L DI    IA G WH++ I  +G V+ +G N  GQLG   +G D+   VP 
Sbjct: 641 SLVPVQVKGLKDILA--IATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVP- 697

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
                +   K    +S G+ HS  L +DG V  WG N  GQLG G +    + S VP+ 
Sbjct: 698 ---VQVKGIKDVLAISAGSYHSLALKKDGTVWGWGANARGQLGNGGA---GVYSTVPVQ 750



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 172/398 (43%), Gaps = 65/398 (16%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           E ++++ AAG  H +++   G V+ WGW            +G  G      T + S +P 
Sbjct: 45  ENNIIQIAAGNYHSLALKGDGTVWAWGWNH----------WGQCG------TEESSIIPV 88

Query: 163 EQAPPSDK------RAGEEVVKRRKTSSAREESENPASGDEF---FTLSPCLVTLNPGVK 213
           +     D       R     +K+  T  A   +++   G+     +++ P  V    G+K
Sbjct: 89  KVKGLKDVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQV---KGLK 145

Query: 214 -ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGK 269
            +  +AAG  ++L L   G VW WG     Q+  GS  K    P  I  L+     A+GK
Sbjct: 146 DVVAIAAGDGYSLGLKKDGTVWCWGLNESIQVIDGSN-KDFSVPFQIKGLKDVVAIAAGK 204

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKE-----------------------IACGGRHSAVVTD 306
           D  L +++       +   +Y ++                       IA G  HS  +  
Sbjct: 205 DYSLALKKDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDVVAIAAGRYHSLALKK 264

Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            G +  +G   YGQ G+G + D   P    +L D  V  IAAG  H++ +  +G ++ +G
Sbjct: 265 DGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKD--VVAIAAGENHSLALKKDGTIWAWG 322

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N++GQLG  + +   VP   ++     K    ++ G  HS  L +DG V SWG N YGQ
Sbjct: 323 DNEWGQLGNSISEKLCVPVQFKSL----KDVVAIAAGCEHSLALKKDGTVWSWGNNYYGQ 378

Query: 427 LGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTLLLAE 463
           LG G+SID  +P  V + G      IA G  H+L L +
Sbjct: 379 LGNGNSIDSYVP--VQVRGLKDVVAIATGNAHSLALKK 414



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 202/490 (41%), Gaps = 77/490 (15%)

Query: 18  KETVVYMWGYLPGTSPEK---SPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
           K+  V+MW Y      +    +   SP+P ++ G    KDV     G   +LA  + G +
Sbjct: 212 KDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEG---LKDVVAIAAGRYHSLALKKDGTV 268

Query: 73  ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
             WG+ +  GQ  L +GK  ++ +P  +     VV  AAG  H +++ + G ++ WG   
Sbjct: 269 WAWGN-NYYGQ--LGNGKSEDSYDPVQVKNLKDVVAIAAGENHSLALKKDGTIWAWG--- 322

Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG----EEVVKRRKTSSAREE 188
                    ++G  G    +S  ++  +P +     D  A     E  +  +K  +    
Sbjct: 323 -------DNEWGQLG----NSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSW 371

Query: 189 SENP----ASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
             N      +G+   +  P  V    G+K +  +A G  H+L L   G VW WG    GQ
Sbjct: 372 GNNYYGQLGNGNSIDSYVPVQVR---GLKDVVAIATGNAHSLALKKDGTVWAWGNNEFGQ 428

Query: 244 LGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQ-GSV------------NSSGKAG 287
           LG G+  K    P  +  L+     A+G D  L  ++ G+V            N SG  G
Sbjct: 429 LGNGTN-KSSFVPVQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYG 487

Query: 288 RSY-----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
           + Y           V  +A G  HS  +   G +  +G   +G  G+        P    
Sbjct: 488 QYYAVPVQVKGLKDVVAVAAGSVHSLALKKDGTIWAWGSNYHGLLGN-DIERSFVPVQVK 546

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
            L D  V  IAAG  H++ +  +G V+ +G   F  L    + +  V   +   I   K 
Sbjct: 547 GLKD--VVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLN---ENSRLVYSSVPVQIKGLKD 601

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IAC 453
              ++ G  HS  L +DG V +WG N +GQLG   +  R   SLVP+     ++   IA 
Sbjct: 602 VVAIAAGEHHSLGLKKDGTVWAWGDNFFGQLG---NSPREKYSLVPVQVKGLKDILAIAT 658

Query: 454 GWWHTLLLAE 463
           G WH+L + +
Sbjct: 659 GEWHSLAIKK 668



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 9/108 (8%)

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
           S ++  + QIAAG +H++ +  +G V+ +G N +GQ GT  +++  +P      +   K 
Sbjct: 42  SKLENNIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGT--EESSIIP----VKVKGLKD 95

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
              ++ G  HS  L +DG V +WG NK GQLG  D+ +    S+VP+ 
Sbjct: 96  VVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEY---SIVPVQ 140


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 123/256 (48%), Gaps = 39/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           GV I  VA G  HT I+S  GQ++ +G G  G LG G+ +  V  P  +  L        
Sbjct: 411 GVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLS-VSQPKEVESL-------- 461

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD-----------AGALLTFGWGLYG 319
           + LLV                K +ACG  H+A + D            G L T+G G  G
Sbjct: 462 KGLLV----------------KSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKG 505

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GH     +L P+  + L+++  +Q++ G   TV ++  G+VY  G +  GQLG     
Sbjct: 506 RLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGN--PH 563

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           A++   ++    L+ +  K +S G+ H A LT  G + +WG    GQLGLG+  DRN P+
Sbjct: 564 AKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPT 623

Query: 440 LV-PIHGFLPRNIACG 454
           LV  +     ++IACG
Sbjct: 624 LVEALRDMQVQSIACG 639



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 129/283 (45%), Gaps = 44/283 (15%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           L P L+     + +T ++ G +H  +++  G+V+ WG G  G+  LG ++ M V +P ++
Sbjct: 294 LLPKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGK--LGHKVDMDVSSPKMV 351

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             L+                          +VK +ACG   +  +TD+G L  +G   YG
Sbjct: 352 ESLDGV------------------------HVKSVACGEYQTCALTDSGELYAWGENKYG 387

Query: 320 Q---CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
               C   S +  L    +  L  + +  +A G WHT  +S  G+++ +G   FG LG G
Sbjct: 388 ANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHG 447

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE-----------DGQVLSWGWNKYG 425
              + + PK +E+  L+    K V+CG+ H+A + +            G++ +WG    G
Sbjct: 448 NLLSVSQPKEVES--LKGLLVKSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKG 505

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPRN-IACGWWHTLLLAETTQI 467
           +LG  D   + +P+ V     L  + ++CG   T+ L  T ++
Sbjct: 506 RLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLTVALTNTGKV 548



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 8/155 (5%)

Query: 319 GQCGHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            Q G+ +T   D L P    S + + V  I+ G  H   I+  G V+ +G    G+LG  
Sbjct: 281 NQFGYHNTKQVDALLPKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHK 340

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG-QLGLGD-SID 434
           VD   + PK++E+  L+    K V+CG   +  LT+ G++ +WG NKYG  LG  + S  
Sbjct: 341 VDMDVSSPKMVES--LDGVHVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRS 398

Query: 435 RNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           + +P  +  P+ G    N+ACG WHT +++ + Q+
Sbjct: 399 QWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQL 433



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 25/164 (15%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P  V     +   +V+ G   T+ L++ G+V+  G    GQLG          PH   
Sbjct: 516 LLPTCVAQLVELDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLG---------NPH--- 563

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                   KD+ +++ +G      K    +VKEI+ G  H A +T +G+L T+G G  GQ
Sbjct: 564 -------AKDKSIVIVEG------KLKEEFVKEISSGSYHVAALTSSGSLYTWGKGTNGQ 610

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
            G G+  D+  P+   +L D+QV+ IA G   T  I +   + V
Sbjct: 611 LGLGNVEDRNFPTLVEALRDMQVQSIACGSNLTAAICLHKSISV 654


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 4/177 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGG+H+A+VT  G + ++G    G+ GHG  +D + P    +L +  +E +A G 
Sbjct: 312 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGE 371

Query: 351 WHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G     FG LG G + +  VPK +  P LE      +SCG  H+A
Sbjct: 372 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 430

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           V+T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + E 
Sbjct: 431 VVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAVIEV 487



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 123/257 (47%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R K +  P  +  L        
Sbjct: 416 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSISLPKEVESL-------- 466

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                         K  R+   + ACG  H+A V +             G L T+G G  
Sbjct: 467 --------------KGLRTV--QAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDK 510

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+  ++L++    Q+A G   TV  +  G VY  G   +GQLG  + 
Sbjct: 511 GRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLA 570

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
             + +P  +E  + +S   + ++CGA H AVLT   +V +WG    G+LG GD+ DRN P
Sbjct: 571 DGK-LPTRVEGKLSKS-FVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 628

Query: 439 SLV-PIHGFLPRNIACG 454
           SLV  +     ++IACG
Sbjct: 629 SLVEALKDKQVKSIACG 645



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 49/272 (18%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  +A GG+H  +++  G+++ WG    G+LG G    ++  P LI  L +       
Sbjct: 310 LDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVM-HPKLIDALSN------- 361

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQ 329
                            + ++ +ACG  H+  VT +G L T+G G Y  G  GHG+    
Sbjct: 362 -----------------TNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 404

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P   +  ++ I V  I+ G WHT  ++  G+++ FG   FG LG G  ++ ++PK +E
Sbjct: 405 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVE 464

Query: 389 TPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLGDSIDRN 436
           +  L+  R    +CG  H+A + E             G++ +WG    G+LG GD   + 
Sbjct: 465 S--LKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 522

Query: 437 IPSLVPIHGFLPRN---IACGWWHTLLLAETT 465
           +P+ V     +  N   +ACG  H+L +A TT
Sbjct: 523 VPTCVA--ALVEPNFCQVACG--HSLTVARTT 550



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 6/148 (4%)

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G   D L P    S + + V+ IA G  H   ++ +G ++ +G    G+LG GVD     
Sbjct: 293 GVKMDSLFPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMH 352

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPSLV 441
           PKL++   L +   ++V+CG  H+  +T  G + +WG   Y  G LG G+ +   +P  V
Sbjct: 353 PKLIDA--LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 410

Query: 442 --PIHGFLPRNIACGWWHTLLLAETTQI 467
             P+ G    +I+CG WHT ++    Q+
Sbjct: 411 NGPLEGIHVSSISCGPWHTAVVTSAGQL 438



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 148/356 (41%), Gaps = 68/356 (19%)

Query: 53  KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAA 110
           +++  GG   AL T + G++ +WG   +E    L  G   +   P  +   +  ++   A
Sbjct: 313 QNIACGGQHAALVTKQ-GEIFSWG---EESGGRLGHGVDSDVMHPKLIDALSNTNIELVA 368

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS--TGKQSALPTEQAPPS 168
            G  H  +VT +G++YTWG          T +FG  G   + S    K+   P E    S
Sbjct: 369 CGEYHTCAVTLSGDLYTWG--------DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 420

Query: 169 DKRAG---EEVVKRRKTSSAREESENPAS------GDEFFTLSPCLVTLNPGVKITKVAA 219
               G     VV    TS+ +  +    +      GD      P  V    G++  + A 
Sbjct: 421 SISCGPWHTAVV----TSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAAC 476

Query: 220 GGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPT-------PHL- 258
           G  HT  + ++            G+++ WG G +G+LG G +  K+VPT       P+  
Sbjct: 477 GVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 536

Query: 259 -IPC-----LEHAASGK------------DRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
            + C     +    SG               PL   +      GK  +S+V+EIACG  H
Sbjct: 537 QVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPTRVEGKLSKSFVEEIACGAYH 596

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            AV+T    + T+G G  G+ GHG T+D+  PS   +L D QV+ IA G   T  I
Sbjct: 597 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTSFTAAI 652


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGGRH+A+VT  G + ++G    G+ GHG  +D L P    +L +  +E +A G 
Sbjct: 311 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGE 370

Query: 351 WHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +H+  +++ G +Y +G     +G LG G   +  VPK +  P LE      +SCG  H+A
Sbjct: 371 YHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGP-LEGIHVSYISCGPWHTA 429

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           V+T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + E
Sbjct: 430 VVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVE 485



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 44/269 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  +A GGRH  +++  G+V+ WG    G+LG G     V +  L P L  A S  + 
Sbjct: 309 LDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHG-----VDSDVLHPKLIEALSNTN- 362

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                              ++ +ACG  HS  VT +G L T+G G   YG  GHG+    
Sbjct: 363 -------------------IELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSH 403

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P   +  ++ I V  I+ G WHT  ++  G+++ FG   FG LG G  ++ ++P+ +E
Sbjct: 404 WVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVE 463

Query: 389 TPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLGDSIDRN 436
           +  L+  R    +CG  H+A + E               + +WG    G+LG  D   + 
Sbjct: 464 S--LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKL 521

Query: 437 IPSLVPIHGFLPRNIACGWWHTLLLAETT 465
           +P+ V +       +ACG  H+L +A TT
Sbjct: 522 VPTCVALAEHNVCQVACG--HSLTVALTT 548



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 124/258 (48%), Gaps = 43/258 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R K V  P  +  L+       
Sbjct: 415 GIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR-KSVSLPREVESLK------- 466

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA------------LLTFGWGLY 318
                           G   V+  ACG  H+A V +               L T+G G  
Sbjct: 467 ----------------GLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDK 509

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GH     +L P+  + L +  V Q+A G   TV ++  GRVY  G   +GQLG    
Sbjct: 510 GRLGHVDKEAKLVPTCVA-LAEHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQLGN--P 566

Query: 379 QAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           QA+  +P L+E  + ES   + ++CGA H AVLT   +V +WG    G+LG GD+ DRN 
Sbjct: 567 QADGKLPILVEGKLSES-FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNT 625

Query: 438 PSLV-PIHGFLPRNIACG 454
           P+LV  +     ++IACG
Sbjct: 626 PTLVEALKDKDVKSIACG 643



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G+  D L P    S + + V+ IA G  H   ++ +G V+ +G    G+LG GVD     
Sbjct: 292 GAKMDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLH 351

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG---WNKYGQLGLGDSIDRNIPSL 440
           PKL+E   L +   ++V+CG  HS  +T  G + +WG   +N YG LG G+ +   +P  
Sbjct: 352 PKLIEA--LSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYN-YGLLGHGNQVSHWVPKR 408

Query: 441 V--PIHGFLPRNIACGWWHTLLLAETTQI 467
           V  P+ G     I+CG WHT ++    Q+
Sbjct: 409 VNGPLEGIHVSYISCGPWHTAVVTSAGQL 437



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 74/161 (45%), Gaps = 26/161 (16%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           D+   L P  V L     + +VA G   T+ L+  G+V+  G    GQLG          
Sbjct: 516 DKEAKLVPTCVALAEH-NVCQVACGHSLTVALTTSGRVYTMGSPVYGQLG---------N 565

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
           P         A GK  P+LV        GK   S+V+EIACG  H AV+T    + T+G 
Sbjct: 566 PQ--------ADGK-LPILVE-------GKLSESFVEEIACGAYHVAVLTSRTEVYTWGK 609

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G  G+ GHG T+D+  P+   +L D  V+ IA G   T  I
Sbjct: 610 GANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTTFTAAI 650


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 116/237 (48%), Gaps = 39/237 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++ ++A G  HTL+L+  G+V   G     QLG                 +  ++ K 
Sbjct: 50  GIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLG-----------------QEVSTTKP 92

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-Q 329
            P+   Q             + ++ CG +HS  +T+AG +  +G    GQ G+G   + +
Sbjct: 93  EPVTALQC----------LRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESR 142

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVP---- 384
           L P +  +L    V QIA G  H + +   G +Y +G N  GQLG G V + + VP    
Sbjct: 143 LSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVT 202

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            LL  P+ +      ++CGA HS VL++ G +  WG N++GQLGL D+ DR  P+L+
Sbjct: 203 NLLGLPLSQ------IACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLL 253



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 147/390 (37%), Gaps = 131/390 (33%)

Query: 59  GCGFALATSESGKLITWGSADDE--GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
           G    L  +  G++++ GS D +  GQ   T+      PEP        +V+   G  H 
Sbjct: 59  GAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTT-----KPEPVTALQCLRIVQVCCGQQHS 113

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +++TEAG+VY WG          +   G  G    +  G++S            R     
Sbjct: 114 MALTEAGQVYMWG----------SNSKGQLG----NGEGQES------------RLSPRF 147

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           VK                     TL+P          + ++A G  H L L + G ++ W
Sbjct: 148 VK---------------------TLAP--------FTVVQIACGSNHCLALLNNGALYAW 178

Query: 237 GYGGEGQLGLGS-----RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV------NSSGK 285
           G  G GQLG+G+     R+ +  T  L   L   A G +  +++ +  V      N  G+
Sbjct: 179 GDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQ 238

Query: 286 AGRS-----------------YVKEIACGGRHSAVVTDAGALLTFGW------------- 315
            G S                 +VK IA GG HSA +T  G + TFGW             
Sbjct: 239 LGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFYESHEVRISLR 298

Query: 316 ---------------------------GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
                                      G YGQ GHGS NDQL P     LM   + QIA 
Sbjct: 299 GTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMKIQELMGTTITQIAL 358

Query: 349 GLWHTVCIS-VEGRVYVFGGNQFGQLGTGV 377
           G  HTVC +   G+V+ FG    GQLG+ V
Sbjct: 359 GRCHTVCYAPTVGKVFTFGLGGNGQLGSSV 388



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 127/303 (41%), Gaps = 48/303 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G E  T  P  VT    ++I +V  G +H++ L++ GQV+ WG   +GQLG G   +   
Sbjct: 84  GQEVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRL 143

Query: 255 TPHLIPCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRSYVKE---------- 293
           +P  +  L        A G +  L L+  G++     N +G+ G   V E          
Sbjct: 144 SPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTN 203

Query: 294 --------IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
                   IACG  HS V++ +G +  +G   +GQ G     D+  P+   +L    V+ 
Sbjct: 204 LLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKF 263

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           IAAG  H+  ++  G V+ FG + +   ++   +   E+ P+               S  
Sbjct: 264 IAAGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQ---------------SAL 308

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLA 462
           AR    L E  +     +  YGQLG G   D+  P  +  + G     IA G  HT+  A
Sbjct: 309 ARKLFSLIER-EFCRHSYGSYGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCHTVCYA 367

Query: 463 ETT 465
            T 
Sbjct: 368 PTV 370



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 72/158 (45%), Gaps = 14/158 (8%)

Query: 311 LTFGWGLYGQCGHGSTNDQLR--PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           L FG    G+ G G   D +   P     L  I+V QIA G  HT+ ++  GRV   G N
Sbjct: 19  LGFGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSN 78

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
              QLG  V   +  P       L+  R   V CG +HS  LTE GQV  WG N  GQLG
Sbjct: 79  DHDQLGQEVSTTKPEP----VTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLG 134

Query: 429 LGDSID-----RNIPSLVPIHGFLPRNIACGWWHTLLL 461
            G+  +     R + +L P   F    IACG  H L L
Sbjct: 135 NGEGQESRLSPRFVKTLAP---FTVVQIACGSNHCLAL 169



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 22/200 (11%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   ++  S+SG +  WGS +  GQ  L+  K    P       +  V   AAG AH  +
Sbjct: 215 GANHSMVLSKSGVIFVWGS-NRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAA 273

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD-KRAGEEVV 177
           +T  G V+T+GW                 SF +    + S   TE  P S   R    ++
Sbjct: 274 LTAHGGVFTFGW-----------------SFYESHEVRISLRGTESNPQSALARKLFSLI 316

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGW 236
           +R     +         G +   L+P  +    G  IT++A G  HT+  +  +G+V+ +
Sbjct: 317 EREFCRHSYGSYGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTF 376

Query: 237 GYGGEGQLGLGSRIKMVPTP 256
           G GG GQ  LGS + MV TP
Sbjct: 377 GLGGNGQ--LGSSVSMVSTP 394



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 365 FGGNQFGQLGTG--VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           FG    G+LG G   D    VP+    P LE  R + ++ GA H+ VLT  G+VLS G N
Sbjct: 21  FGNTNSGELGLGGIEDHIVRVPR--SIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSN 78

Query: 423 KYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
            + QLG   S  +  P +  +       + CG  H++ L E  Q+
Sbjct: 79  DHDQLGQEVSTTKPEP-VTALQCLRIVQVCCGQQHSMALTEAGQV 122


>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 479

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 120/257 (46%), Gaps = 33/257 (12%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAA 266
           P VK   +AAG  HT+ L + G VW WG+   GQLG G+   R   V    +   +  AA
Sbjct: 226 PTVK--AIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGISDVVAIAA 283

Query: 267 SGKDRPLLVRQGSV------------NSSGK----------AGRSYVKEIACGGRHSAVV 304
                  L   G+V            N + K           G S VK IA G  ++ V+
Sbjct: 284 GMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVL 343

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
            + G +  +G   YG+ G G+TN+   P   + + +  V+ IAAG +HTV +  +G V+ 
Sbjct: 344 KNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISN--VKAIAAGAYHTVVLKNDGTVWT 401

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G N +G+LG G     + P      +      K ++ GA H+  L  DG V +WG N Y
Sbjct: 402 WGYNHYGELGNGTTVDSSTP----VQVKGISDVKAIAAGACHTVALKNDGTVWAWGCNYY 457

Query: 425 GQLGLGDSIDRNIPSLV 441
           G+LG G ++D + P  V
Sbjct: 458 GELGNGTAVDSSTPVQV 474



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 125/289 (43%), Gaps = 56/289 (19%)

Query: 107 VKA-AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           VKA AAG  H V++   G V+ WGW +C          G  G    D T     +P +  
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDC----------GQLG----DGTTTNRTIPVQVK 273

Query: 166 PPSDKRA------GEEVVKRRKTSSAREESENPASGDEF----FTLSPCLVTLNPGVKIT 215
             SD  A          +K   T  A  ++E+   G+E     +  +P  V     VK  
Sbjct: 274 GISDVVAIAAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVK-- 331

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            +AAG  +T++L + G VW WG    G+LG G+                  +    P+ V
Sbjct: 332 AIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGT-----------------TNNSFTPVQV 374

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                      G S VK IA G  H+ V+ + G + T+G+  YG+ G+G+T D   P   
Sbjct: 375 N----------GISNVKAIAAGAYHTVVLKNDGTVWTWGYNHYGELGNGTTVDSSTPVQV 424

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
             + D  V+ IAAG  HTV +  +G V+ +G N +G+LG G     + P
Sbjct: 425 KGISD--VKAIAAGACHTVALKNDGTVWAWGCNYYGELGNGTAVDSSTP 471



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 106/289 (36%), Gaps = 60/289 (20%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
              G    +A    G +  WG  +D GQ  L  G       P  +   + VV  AAG  H
Sbjct: 231 IAAGAYHTVALKNDGTVWAWG-WNDCGQ--LGDGTTTNRTIPVQVKGISDVVAIAAGMYH 287

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP------SD 169
            V++   G V+ WG  E                   D  G ++      + P      SD
Sbjct: 288 TVALKNDGTVWAWGDNE------------------HDQLGNETTKEEYHSTPVQVKGISD 329

Query: 170 KRAGEE------VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
            +A         V+K   T  A   +E    GD     S   V +N    +  +AAG  H
Sbjct: 330 VKAIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVKAIAAGAYH 389

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           T++L + G VW WGY   G+LG G+ +                     P+ V+       
Sbjct: 390 TVVLKNDGTVWTWGYNHYGELGNGTTVD-----------------SSTPVQVK------- 425

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
              G S VK IA G  H+  + + G +  +G   YG+ G+G+  D   P
Sbjct: 426 ---GISDVKAIAAGACHTVALKNDGTVWAWGCNYYGELGNGTAVDSSTP 471



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 5/120 (4%)

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
           V+ IAAG +HTV +  +G V+ +G N  GQLG G      +P      +        ++ 
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIP----VQVKGISDVVAIAA 283

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTLLL 461
           G  H+  L  DG V +WG N++ QLG   + +    + V + G    + IA G  +T++L
Sbjct: 284 GMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVL 343


>gi|255547958|ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
 gi|223546087|gb|EEF47590.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
          Length = 537

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 130/259 (50%), Gaps = 30/259 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGK 269
           G++I + AAG   T+++SD GQV+ +G    G+   G +  K+V TP L+  L++     
Sbjct: 196 GIRIIQAAAGPGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNI---- 251

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                               +V + A G   +AV++  G + TF WG  G+ GH +    
Sbjct: 252 --------------------FVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHQTEPTD 291

Query: 330 LRPS-YASSLMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGTGVDQAENVPK 385
           + P     +L +I V QIAAG  + + ++ +     VY  G    G+LG G    E  P+
Sbjct: 292 VEPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPR 351

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIH 444
           L+E   L + +  VV+ GA H+AV+  DG+V +WGW +YG LG G+    ++P +V  + 
Sbjct: 352 LIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALS 411

Query: 445 GFLPRNIACGWWHTLLLAE 463
                ++A G + T +++E
Sbjct: 412 NIKAVHVATGDYTTFVVSE 430



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 185/443 (41%), Gaps = 117/443 (26%)

Query: 10  ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDV-----CGGGC---- 60
           E   ++ C++  ++     P TS E+  +      + CGG SWK V      G  C    
Sbjct: 97  ELAALDMCQKRAIFK----PMTSEERRDL-----KQRCGG-SWKLVLRFLLAGEACCRRE 146

Query: 61  --------GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVV 107
                   G ++A +  G + ++GS +  GQ       HG T E + P    +     ++
Sbjct: 147 NSQAIAGPGHSIAVTSKGVVYSFGS-NSSGQL-----GHGNTEEEWRPRQIRSLQGIRII 200

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
           +AAAG    + +++AG+VY +G                     KDS G            
Sbjct: 201 QAAAGPGRTMLISDAGQVYAFG---------------------KDSFG------------ 227

Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
                               E+E    G +  T +P LV     + + + A G   T +L
Sbjct: 228 --------------------EAEYGVQGTKLVT-TPQLVESLKNIFVVQAAIGNFFTAVL 266

Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
           S  G+V+ + +G +G+LG  +    V    L+  LE+       P++           AG
Sbjct: 267 SREGRVYTFSWGSDGKLGHQTEPTDVEPHPLLGALENI------PVV--------QIAAG 312

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS--SLMDIQVEQ 345
             Y+  +AC     +V        + G GL G+ GHGS  D+  P       L+++Q   
Sbjct: 313 YCYLLALACQPSGMSV-------YSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMV 365

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           +AAG WH   +  +GRV  +G  ++G LG G ++ E+VPK+++   L + +A  V+ G  
Sbjct: 366 VAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDA--LSNIKAVHVATGDY 423

Query: 406 HSAVLTEDGQVLSWGWNKYGQLG 428
            + V++E+G V S+G  +   LG
Sbjct: 424 TTFVVSEEGDVYSFGCGESASLG 446



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 16/172 (9%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT  G + +FG    GQ GHG+T ++ RP    SL  I++ Q AAG   T+ IS  
Sbjct: 156 HSIAVTSKGVVYSFGSNSSGQLGHGNTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDA 215

Query: 360 GRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           G+VY FG + FG+   GV   + V  P+L+E+  L++      + G   +AVL+ +G+V 
Sbjct: 216 GQVYAFGKDSFGEAEYGVQGTKLVTTPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 273

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFL-------PRNIACGWWHTLLLA 462
           ++ W   G+LG      +  P+ V  H  L          IA G+ + L LA
Sbjct: 274 TFSWGSDGKLG-----HQTEPTDVEPHPLLGALENIPVVQIAAGYCYLLALA 320



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ ++ +G VY FG N  GQLG G  + E  P+ + +  L+  R    + G 
Sbjct: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGNTEEEWRPRQIRS--LQGIRIIQAAAGP 206

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLG 430
             + ++++ GQV ++G + +G+   G
Sbjct: 207 GRTMLISDAGQVYAFGKDSFGEAEYG 232


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G  H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG+ H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYCHSLALSKASEV 158



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYCHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V +IACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 821

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           V+AGG +TL + D G +W WG    GQLGLG          +    +  A    R   + 
Sbjct: 178 VSAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVGSDSDWVAVSAGRHHTLA 237

Query: 277 QGSVNSSGKAGRSYVKEIACGG-----------------------RHSAVVTDAGALLTF 313
             +  +    GR+Y  ++  GG                       RHS  V + G L ++
Sbjct: 238 LKADGTLWAWGRNYFGQLGLGGTTNRNAPEQVGSHSDWAGVIGGDRHSLAVREDGTLWSW 297

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G    GQ G G T ++ RP    +  D     ++AGL HT+ +  +G ++ +GGN FGQL
Sbjct: 298 GQNNVGQLGLGDTVERRRPEQVGN--DSDWATVSAGLLHTLAVKNDGTLWAWGGNGFGQL 355

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
           G G     + P      +        ++ G R+S  +  DG + SWGWN +G+LGLGD+ 
Sbjct: 356 GLGDTDNRDAP----VQVGSDNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGDTD 411

Query: 434 DRNIPSLVPIHGFLPRNIACGWWHTL 459
           DR+ P  V   G     +  G +HTL
Sbjct: 412 DRHAPEQVG-GGMEWAAVTAGMYHTL 436



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 106/225 (47%), Gaps = 33/225 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +AAGG HTL +   G +W WG    GQLGLG   K                 +D P  V 
Sbjct: 128 LAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEK-----------------RDTPAQV- 169

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                       +    ++ GG ++  V D G L  +G   +GQ G G T+D+  P    
Sbjct: 170 ---------GSDTDWAAVSAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVG 220

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
           S  D     ++AG  HT+ +  +G ++ +G N FGQLG G     N P+ + +    S  
Sbjct: 221 S--DSDWVAVSAGRHHTLALKADGTLWAWGRNYFGQLGLGGTTNRNAPEQVGS---HSDW 275

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           A V+  G RHS  + EDG + SWG N  GQLGLGD+++R  P  V
Sbjct: 276 AGVIG-GDRHSLAVREDGTLWSWGQNNVGQLGLGDTVERRRPEQV 319



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 174/413 (42%), Gaps = 71/413 (17%)

Query: 42  IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE---PF 98
            PA++     W  V  GG  + LA  + G L  WG      ++Y      G+T +   P 
Sbjct: 165 TPAQVGSDTDWAAVSAGGA-YTLAVKDDGTLWAWG------ENYFGQLGLGDTDDRHAPE 217

Query: 99  PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
            + +++  V  +AG  H +++   G ++ WG R            G  G+  +++     
Sbjct: 218 QVGSDSDWVAVSAGRHHTLALKADGTLWAWG-RNYFGQ------LGLGGTTNRNAP---- 266

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREES------ENPAS----GDEFFTLSPCLVTL 208
               EQ       AG  +   R + + RE+       +N       GD      P  V  
Sbjct: 267 ----EQVGSHSDWAGV-IGGDRHSLAVREDGTLWSWGQNNVGQLGLGDTVERRRPEQVGN 321

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           +       V+AG  HTL + + G +W WG  G GQLGLG                     
Sbjct: 322 DS--DWATVSAGLLHTLAVKNDGTLWAWGGNGFGQLGLGD-----------------TDN 362

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
           +D P+ V  GS N            +  G R+S  V + G+L ++GW  +G+ G G T+D
Sbjct: 363 RDAPVQV--GSDND--------WAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGDTDD 412

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           +  P      M+     + AG++HT+ +  +G +  +G N FG+LG GV      P  L+
Sbjct: 413 RHAPEQVGGGMEWAA--VTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVYITSP--LQ 468

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           T + E+  A   S G   +  +  DG +  WG N  GQLGLGD+ DR+ P  V
Sbjct: 469 T-VTEADWA-AASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQV 519



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 167/423 (39%), Gaps = 54/423 (12%)

Query: 43  PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
           P ++   + W      G  ++LA    G L +WG  +D G+  L        PE      
Sbjct: 366 PVQVGSDNDWA-ALNAGQRYSLAVKNDGSLWSWG-WNDFGELGLGDTDDRHAPEQVGGGM 423

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSAL 160
           E + V A  G  H + V   G +  WG            DFG  G       ++  Q+  
Sbjct: 424 EWAAVTA--GMYHTLGVKADGTLRAWG----------RNDFGELGLGVMVYITSPLQTVT 471

Query: 161 PTEQAPPSDKRAGEEVVKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
             + A  S  +   + VK   +     R  S     GD     +P  V  +     T ++
Sbjct: 472 EADWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQVGGDS--DWTSLS 529

Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
            G  HTL +   G +WGWG    GQLGLG                      DR    R G
Sbjct: 530 VGREHTLAVKADGTLWGWGQNYNGQLGLGDT-------------------DDRKTPERVG 570

Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
           S         S    ++ G  ++  V D G L  +G   +GQ G G TN++  P   +S 
Sbjct: 571 S--------DSDWATVSAGTGYTLAVKDDGTLWAWGRNSHGQLGLGDTNNRDAPVQVAS- 621

Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
            D     ++AG  HT+ +  +G ++ +G N  GQLG G     +VP+     +       
Sbjct: 622 -DNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDNRDVPE----QVGSDTDWA 676

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHT 458
            VS G+ H+  +  DG + +WG N  GQLGLGD+ +R+ P  V         +  GW HT
Sbjct: 677 AVSTGSGHTLAVKTDGTLWAWGRNSDGQLGLGDTDERHAPEQVGGDSDWAA-VTAGWQHT 735

Query: 459 LLL 461
           L +
Sbjct: 736 LAI 738



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 149/403 (36%), Gaps = 53/403 (13%)

Query: 43  PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
           P ++     W  V  G     LA    G L  WG     G   L  G       P  + +
Sbjct: 316 PEQVGNDSDWATVSAGLL-HTLAVKNDGTLWAWGG---NGFGQLGLGDTDNRDAPVQVGS 371

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG--KQSAL 160
           +       AG  + ++V   G +++WGW           DFG  G    D     +Q   
Sbjct: 372 DNDWAALNAGQRYSLAVKNDGSLWSWGWN----------DFGELGLGDTDDRHAPEQVGG 421

Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSA--REESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
             E A  +        VK   T  A  R +      G   +  SP              +
Sbjct: 422 GMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVYITSPLQTVTE--ADWAAAS 479

Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
           AG   T  +   G +WGWG    GQLGLG                      DR   V+ G
Sbjct: 480 AGQYQTQAVKADGSLWGWGRNHSGQLGLGDT-------------------DDRHAPVQVG 520

Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
                   G S    ++ G  H+  V   G L  +G    GQ G G T+D+  P    S 
Sbjct: 521 --------GDSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERVGS- 571

Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
            D     ++AG  +T+ +  +G ++ +G N  GQLG G     + P      +       
Sbjct: 572 -DSDWATVSAGTGYTLAVKDDGTLWAWGRNSHGQLGLGDTNNRDAP----VQVASDNDWA 626

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            VS G+RH+  +  DG + +WG N  GQLGLGD+ +R++P  V
Sbjct: 627 AVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDNRDVPEQV 669



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 35/213 (16%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           V+AG RHTL + + G +W WG   +GQLGLG +  + VP        E   S  D     
Sbjct: 628 VSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDNRDVP--------EQVGSDTDWA--- 676

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                             ++ G  H+  V   G L  +G    GQ G G T+++  P   
Sbjct: 677 -----------------AVSTGSGHTLAVKTDGTLWAWGRNSDGQLGLGDTDERHAPEQV 719

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
               D     + AG  HT+ I  +G ++ +G N +GQLG G     + P      +    
Sbjct: 720 GG--DSDWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDTDGRHAPM----QVGSDS 773

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
               V+ G  H+  + +DG + +WG N++GQLG
Sbjct: 774 DWATVAAGRYHTLAVKDDGTLRAWGRNRFGQLG 806



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +A GG H+  +   G L  +G    GQ G G T  +  P+   S  D     ++AG  +T
Sbjct: 128 LAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGS--DTDWAAVSAGGAYT 185

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           + +  +G ++ +G N FGQLG G     + P+     +        VS G  H+  L  D
Sbjct: 186 LAVKDDGTLWAWGENYFGQLGLGDTDDRHAPE----QVGSDSDWVAVSAGRHHTLALKAD 241

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
           G + +WG N +GQLGLG + +RN P  V  H
Sbjct: 242 GTLWAWGRNYFGQLGLGGTTNRNAPEQVGSH 272



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 27/43 (62%)

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           V++ G  H+  +  DG + +WG N  GQLGLGD+  R+ P+ V
Sbjct: 127 VLAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDTPAQV 169


>gi|325185931|emb|CCA20435.1| hypothetical protein VOLCADRAFT_70529 [Albugo laibachii Nc14]
          Length = 388

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 165/402 (41%), Gaps = 109/402 (27%)

Query: 41  PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA---DDEGQSYLTSGKHGETPEP 97
           P   ++CGG++          F LA +++ +LI WGSA   +   +   T   H     P
Sbjct: 46  PCITQICGGET----------FCLALNDANQLIGWGSAFYGELGPEKATTEECHVICVRP 95

Query: 98  FPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
             L    S+   + A GW H +++++ G +Y WG          +  F   G        
Sbjct: 96  HVLFPSFSLEWERIACGWHHAIAISK-GCMYAWG----------SNAFDQIG-------- 136

Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
                                    + S++   S+ P        +SP  +  +  + + 
Sbjct: 137 -------------------------RVSNSNSNSQLPNC-----IISPMRIAFS--INVI 164

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR---IKMVPTPHLIPCLEHAASGKDRP 272
            V+AG  H+L+L    ++W WG    G+LGLG     IK V +P L+   E      + P
Sbjct: 165 NVSAGFGHSLLLDQHHRLWTWGRNSNGELGLGQSFRDIKSVQSPQLVKATE------EEP 218

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
           L +                  IA G  HSA ++  G L TFGWGLY Q GHG++ D    
Sbjct: 219 LHL------------------IATGYAHSAAISLTGQLYTFGWGLYHQLGHGNSQDLHEL 260

Query: 333 SYASSL--------MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
           +   +         + I++  +A G WHT   +  G +Y +G N+ GQLG     ++  P
Sbjct: 261 TRIQAFDGIRDDQAVPIRITSVACGTWHTAVCTSSGDLYTWGWNENGQLGHLGKASKISP 320

Query: 385 KLLET------PILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            ++ +       +LE+   K V CG RH+  L E G+V  WG
Sbjct: 321 CVVSSQDAAIQTLLEN--VKDVVCGNRHTTALCEGGKVFHWG 360



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 123/307 (40%), Gaps = 59/307 (19%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-----MVPTPH-LIPCL----E 263
           IT++  G    L L+D  Q+ GWG    G+LG           +   PH L P      E
Sbjct: 48  ITQICGGETFCLALNDANQLIGWGSAFYGELGPEKATTEECHVICVRPHVLFPSFSLEWE 107

Query: 264 HAASGKDRPLLVRQGSV-----NSSGKAGRS-----------------------YVKEIA 295
             A G    + + +G +     N+  + GR                         V  ++
Sbjct: 108 RIACGWHHAIAISKGCMYAWGSNAFDQIGRVSNSNSNSQLPNCIISPMRIAFSINVINVS 167

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ----IAAGLW 351
            G  HS ++     L T+G    G+ G G +   ++   +  L+    E+    IA G  
Sbjct: 168 AGFGHSLLLDQHHRLWTWGRNSNGELGLGQSFRDIKSVQSPQLVKATEEEPLHLIATGYA 227

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR--------AKVVSCG 403
           H+  IS+ G++Y FG   + QLG G   ++++ +L      +  R           V+CG
Sbjct: 228 HSAAISLTGQLYTFGWGLYHQLGHG--NSQDLHELTRIQAFDGIRDDQAVPIRITSVACG 285

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-----PIHGFLP--RNIACGWW 456
             H+AV T  G + +WGWN+ GQLG      +  P +V      I   L   +++ CG  
Sbjct: 286 TWHTAVCTSSGDLYTWGWNENGQLGHLGKASKISPCVVSSQDAAIQTLLENVKDVVCGNR 345

Query: 457 HTLLLAE 463
           HT  L E
Sbjct: 346 HTTALCE 352



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 18/193 (9%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG-HGSTNDQ-----LRPSYASSLMDIQVE 344
           + +I  G      + DA  L+ +G   YG+ G   +T ++     +RP        ++ E
Sbjct: 48  ITQICGGETFCLALNDANQLIGWGSAFYGELGPEKATTEECHVICVRPHVLFPSFSLEWE 107

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN--VPKLLETPILESKRAKV--V 400
           +IA G  H + IS +G +Y +G N F Q+G   +   N  +P  + +P+  +    V  V
Sbjct: 108 RIACGWHHAIAIS-KGCMYAWGSNAFDQIGRVSNSNSNSQLPNCIISPMRIAFSINVINV 166

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-----PSLVPIHGFLPRN-IACG 454
           S G  HS +L +  ++ +WG N  G+LGLG S  R+I     P LV      P + IA G
Sbjct: 167 SAGFGHSLLLDQHHRLWTWGRNSNGELGLGQSF-RDIKSVQSPQLVKATEEEPLHLIATG 225

Query: 455 WWHTLLLAETTQI 467
           + H+  ++ T Q+
Sbjct: 226 YAHSAAISLTGQL 238


>gi|392340833|ref|XP_001072061.3| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
           norvegicus]
 gi|392348476|ref|XP_216557.6| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
           norvegicus]
          Length = 500

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H A  
Sbjct: 125 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEALSHEA-- 181

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +TD G++  FG    GQ G G+  D
Sbjct: 182 ----------------------IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTD 219

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 220 AV-PSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 278

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 279 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 338

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 339 RLGHAEQKDEMVPRLVKLFDF 359



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 136/336 (40%), Gaps = 68/336 (20%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L+D G V+ +G    GQLG
Sbjct: 154 RNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLG 213

Query: 246 LGSRIKMVPTPHLI-----PCLEHAASGKDRPLLVRQGSV-------------NSSGK-- 285
           LG++   VP+P  I     P  + A   +   L+  +G++             NS GK  
Sbjct: 214 LGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFI 273

Query: 286 -------------------------------AGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                               V+++ACG  H+ V+     + ++G
Sbjct: 274 ARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWG 333

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G YG+ GH    D++ P     L D       QI AG   +  +S  G ++ +G     
Sbjct: 334 FGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTS 392

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN-KYGQLGLG 430
           +      ++   PK ++   L   R + ++CG + S ++  D   +SWG +  +G+LG G
Sbjct: 393 R------ESTMYPKAVQD--LCGWRIRSLACG-KSSIIVAADESTISWGPSPTFGELGYG 443

Query: 431 DSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLAE 463
           D   ++  +   +  + G     +A G+ H+L++A 
Sbjct: 444 DHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIAR 479


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 125/275 (45%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G  H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G D + +  P+LL++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG+  K   +P L+  L         
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG+ H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYCHSLALSKASEV 158



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P ++   D+ +++    CG A  LA ++ G++  WG   D     + S +    P     
Sbjct: 75  PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
            ++  +V+ A G+ H +++++A EV+ WG  +          +G    G+  K  T  Q 
Sbjct: 134 LSDIQIVQVACGYCHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
                  P     AG         S A     R +       DE     P L+      K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  +  G  HT  L+  G V+ +G GG GQLG  S      T H I           R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
               GS+          V +IACG +H SA V  +G + +FG G  GQ G GST+++  P
Sbjct: 289 FELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   T + ++ P    SL DIQ+ QIA G +H++ +S    V+ +G N+ GQLG
Sbjct: 111 DTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G + ++++ P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGFELKSQSAPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 159/395 (40%), Gaps = 93/395 (23%)

Query: 53  KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
           K V   GCG    +   + G + T G  +D GQ  L   K  + PE        ++V  +
Sbjct: 34  KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
            G AH +++ + G+VY WG                        T  Q  LP         
Sbjct: 91  CGEAHTLALNDKGQVYAWGL----------------------DTDGQLGLP--------- 119

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
              EE +K  +   +  +                       ++I ++A G  H+L LS  
Sbjct: 120 -GTEEYIKVPRNIKSLTD-----------------------IQIVQIACGYYHSLALSKG 155

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            +V+ WG    GQLGLG  +K    P LI  L                        G  +
Sbjct: 156 SEVFSWGQNKHGQLGLGFELKSQSAPQLIKSL-----------------------LGIPF 192

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           + ++A GG HS V+T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  
Sbjct: 193 M-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICC 249

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH- 406
           G  HT  ++ EG V+ FG   +GQLG      E  P K+ E   L       ++CG +H 
Sbjct: 250 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQIACGRQHT 306

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V+ +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  I       IACG++H+L L++ +++
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQ---IVQIACGYYHSLALSKGSEV 158


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   T + ++ P    SL DIQ+ QIA G +H++ +S    V+ +G N+ GQLG
Sbjct: 111 DTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G + ++++ P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGFELKSQSAPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR +P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 159/395 (40%), Gaps = 93/395 (23%)

Query: 53  KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
           K V   GCG    +   + G + T G  +D GQ  L   K  + PE        ++V  +
Sbjct: 34  KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
            G AH +++ + G+VY WG                        T  Q  LP         
Sbjct: 91  CGEAHTLALNDKGQVYAWGL----------------------DTDGQLGLP--------- 119

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
              EE +K  +   +  +                       ++I ++A G  H+L LS  
Sbjct: 120 -GTEEYIKVPRNIKSLTD-----------------------IQIVQIACGYYHSLALSKG 155

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            +V+ WG    GQLGLG  +K    P LI  L                        G  +
Sbjct: 156 SEVFSWGQNKHGQLGLGFELKSQSAPQLIKSL-----------------------LGIPF 192

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           + ++A GG HS V+T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  
Sbjct: 193 M-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICC 249

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH- 406
           G  HT  ++ EG V+ FG   +GQLG      E  P K+ E   L       ++CG +H 
Sbjct: 250 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQIACGRQHT 306

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V+ +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  I       IACG++H+L L++ +++
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQ---IVQIACGYYHSLALSKGSEV 158


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 114/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+ AG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT++G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 156/377 (41%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  S  L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  +V  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G     +T    A+P        ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +V AGG H+  LS  G V+GWG    G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T  G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 117/258 (45%), Gaps = 40/258 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +T D +  P
Sbjct: 76  -------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +  ++  P+ + +  
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           LE      V+ G  HS  L+  G V  WG N  GQLGL D  DR      P H  L R  
Sbjct: 187 LEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242

Query: 451 ----IACGWWHTLLLAET 464
               I+CG  HT +L + 
Sbjct: 243 KVVYISCGEEHTAVLTKN 260



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           +L +G+   GQ G  STN Q     P     + D  V+++A G  H+V +  +G VY  G
Sbjct: 1   MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG   ++  N P+  +   L  +    V+CG  HS  L++ GQ+ SWG    GQ
Sbjct: 60  LNTKGQLGH--EREGNKPE--QIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           LGL  + D   +P L+  ++      ++CG WH L LA   Q 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158


>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 818

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 121/246 (49%), Gaps = 26/246 (10%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAAS-GKDRPLL 274
           +AAG  HT+ +   G +W WG  G G+LGLG +  + VP          A S G+D  + 
Sbjct: 128 LAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDVPEQVGTDSDWTAVSAGRDHTVA 187

Query: 275 VR-QGSVNSSGKAGRSYVKE------------------IACGGRHSAVVTDAGALLTFGW 315
           V+  G++ + G++GR  + +                  ++ GG H+  V   G L  +G 
Sbjct: 188 VKANGTLWAWGRSGRIGLGDSGDRDEPEQVGVDNDWIALSAGGSHTVAVKADGTLWAWGR 247

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
              GQ G G TN    P+   +  D   ++I+AG  H++ +  +G ++ +G N++GQLG 
Sbjct: 248 NNAGQLGLGDTNHHYTPTQVGTDTDW-AKKISAGRRHSLAVKADGSLWAWGDNEYGQLGL 306

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G     + P+     +  +     +S G RHS  +  DG + SWG+N  GQLGLGD+ DR
Sbjct: 307 GDTDERHAPE----QVGSNTDWAAISAGRRHSLAVKADGSLWSWGYNDSGQLGLGDTADR 362

Query: 436 NIPSLV 441
           N P  V
Sbjct: 363 NAPEQV 368



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 172/418 (41%), Gaps = 53/418 (12%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
           V   G    +A    G L  WG     G   L  G   +   P  + T++     +AG  
Sbjct: 127 VLAAGDDHTVAVKADGTLWAWGR---NGYGRLGLGDTDDRDVPEQVGTDSDWTAVSAGRD 183

Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
           H V+V   G ++ WG      S ++    G   S  +D   +Q  +  +    S   +  
Sbjct: 184 HTVAVKANGTLWAWG-----RSGRI----GLGDSGDRDEP-EQVGVDNDWIALSAGGSHT 233

Query: 175 EVVKRRKTSSA--REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
             VK   T  A  R  +     GD     +P  V  +      K++AG RH+L +   G 
Sbjct: 234 VAVKADGTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWA-KKISAGRRHSLAVKADGS 292

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA--SGKDRPLLVR-QGSV-----NSSG 284
           +W WG    GQLGLG   +      +    + AA  +G+   L V+  GS+     N SG
Sbjct: 293 LWAWGDNEYGQLGLGDTDERHAPEQVGSNTDWAAISAGRRHSLAVKADGSLWSWGYNDSG 352

Query: 285 KAGRSYVKE---------------IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
           + G     +               ++ GG HS  V   G L+ +G    GQ G G T  +
Sbjct: 353 QLGLGDTADRNAPEQVGADTDWDLVSAGGEHSLAVKADGTLMVWGLNHLGQLGLGDTVSR 412

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
             P   +S +      + AG  HTV ++ +G +  +G N++GQLG GV       + + T
Sbjct: 413 DAPVPIASGI-----ALVAGRNHTVAVNPDGTLRAWGDNEYGQLGLGV------MRYIVT 461

Query: 390 P---ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
           P   +  S  A V      HS  L +DG + +WG N YGQLGLGD+ DR  P  V  H
Sbjct: 462 PSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRATPEQVGSH 519



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 175/428 (40%), Gaps = 54/428 (12%)

Query: 43  PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
           P ++   + W  +  GG    +A    G L  WG  ++ GQ  L    H  TP      T
Sbjct: 214 PEQVGVDNDWIALSAGGS-HTVAVKADGTLWAWGR-NNAGQLGLGDTNHHYTPTQVGTDT 271

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG--KQSAL 160
           + +  K +AG  H ++V   G ++ WG            ++G  G    D     +Q   
Sbjct: 272 DWAK-KISAGRRHSLAVKADGSLWAWG----------DNEYGQLGLGDTDERHAPEQVGS 320

Query: 161 PTEQAPPSDKRAGEEVVKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
            T+ A  S  R     VK   +  S    +S     GD     +P  V  +    +  V+
Sbjct: 321 NTDWAAISAGRRHSLAVKADGSLWSWGYNDSGQLGLGDTADRNAPEQVGADTDWDL--VS 378

Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLG---SRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           AGG H+L +   G +  WG    GQLGLG   SR   VP    I  +    +G++  + V
Sbjct: 379 AGGEHSLAVKADGTLMVWGLNHLGQLGLGDTVSRDAPVPIASGIALV----AGRNHTVAV 434

Query: 276 ------RQGSVNSSGKAGRSYVKEIAC--------------GG--RHSAVVTDAGALLTF 313
                 R    N  G+ G   ++ I                GG   HS  + D G L  +
Sbjct: 435 NPDGTLRAWGDNEYGQLGLGVMRYIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAW 494

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G   YGQ G G T+D+  P    S  D     + A  +HT+ +  +G ++ +G N  GQL
Sbjct: 495 GRNNYGQLGLGDTDDRATPEQVGSHTDWAA--VNAASYHTLAVKNDGTLWAWGRNSSGQL 552

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
           G       + P+ + +          VS G  H++ +  DG + +WGWN YGQLGLGD+ 
Sbjct: 553 GLSDTNDRHTPERVGS----DTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTS 608

Query: 434 DRNIPSLV 441
           DR  P  V
Sbjct: 609 DRLSPEQV 616



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 173/434 (39%), Gaps = 61/434 (14%)

Query: 62  FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
            +LA    G L +WG  +D GQ  L        PE     T+  +V  +AG  H ++V  
Sbjct: 333 HSLAVKADGSLWSWGY-NDSGQLGLGDTADRNAPEQVGADTDWDLV--SAGGEHSLAVKA 389

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
            G +  WG              G  G    D+  + + +P              V  R  
Sbjct: 390 DGTLMVWG----------LNHLGQLG--LGDTVSRDAPVPIASGIA-------LVAGRNH 430

Query: 182 TSSAREESENPASGDEFFT---LSPCLVTLNPGVKITKVA----AGG--RHTLILSDMGQ 232
           T +   +    A GD  +    L      + P   +T  A     GG   H+L L D G 
Sbjct: 431 TVAVNPDGTLRAWGDNEYGQLGLGVMRYIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGT 490

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA--SGKDRPLLVRQGSV------NSSG 284
           +W WG    GQLGLG          +    + AA  +     L V+          NSSG
Sbjct: 491 LWAWGRNNYGQLGLGDTDDRATPEQVGSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSG 550

Query: 285 KAGRSYVKE---------------IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
           + G S   +               ++ G  H++ V   G L  +GW  YGQ G G T+D+
Sbjct: 551 QLGLSDTNDRHTPERVGSDTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSDR 610

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           L P       +     ++ GL HTV +  +G ++ +G N  GQLG G     + P  + +
Sbjct: 611 LSPEQVGGESNWLA--VSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAPVQVGS 668

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
              ++  A V + G R  AV   DG + +WG N  GQLGLGD+ +RN P+ V        
Sbjct: 669 ---DTDWAAVSASGYRTLAV-KADGTLWAWGENNNGQLGLGDTDNRNTPAQVGNDADWAA 724

Query: 450 NIACGWWHTLLLAE 463
            ++ G +HTL   E
Sbjct: 725 -VSTGLFHTLAFKE 737



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 147/399 (36%), Gaps = 94/399 (23%)

Query: 43  PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
           P++   G +W  V GG    +L   + G L  WG  ++ GQ  L       TPE     T
Sbjct: 462 PSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGR-NNYGQLGLGDTDDRATPEQVGSHT 520

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           + + V AA+   H ++V   G ++                     ++ ++S+G+     T
Sbjct: 521 DWAAVNAAS--YHTLAVKNDGTLW---------------------AWGRNSSGQLGLSDT 557

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
                                  R   E   S  ++ T                V+ G  
Sbjct: 558 ND---------------------RHTPERVGSDTDWAT----------------VSVGQS 580

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           HT  +   G +W WG+   GQLGLG     + +P  +                       
Sbjct: 581 HTSAVKPDGTLWAWGWNHYGQLGLGDTSDRL-SPEQV----------------------- 616

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
               G S    ++ G  H+  V   G L  +GW + GQ G G T+D+  P    S  D  
Sbjct: 617 ---GGESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAPVQVGS--DTD 671

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
              ++A  + T+ +  +G ++ +G N  GQLG G     N P      +        VS 
Sbjct: 672 WAAVSASGYRTLAVKADGTLWAWGENNNGQLGLGDTDNRNTPA----QVGNDADWAAVST 727

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           G  H+    ED  + +WG N  GQLGLGD+ +R+ P  V
Sbjct: 728 GLFHTLAFKEDDTLWAWGRNHDGQLGLGDTDNRDAPVQV 766



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 8/168 (4%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +A G  H+  V   G L  +G   YG+ G G T+D+  P    +  D     ++AG  HT
Sbjct: 128 LAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDVPEQVGT--DSDWTAVSAGRDHT 185

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           V +   G ++ +G  + G++G G     + P+ +            +S G  H+  +  D
Sbjct: 186 VAVKANGTLWAWG--RSGRIGLGDSGDRDEPEQVGV----DNDWIALSAGGSHTVAVKAD 239

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
           G + +WG N  GQLGLGD+     P+ V       + I+ G  H+L +
Sbjct: 240 GTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWAKKISAGRRHSLAV 287


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 95/176 (53%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACG RH+A+VT  G + ++G  L G+ GHG  +D L P     L +  VE +A G 
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGE 366

Query: 351 WHTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +H+  +++ G +Y +GG+    G LG   + +  VPK L  P LE      VSCG  H+A
Sbjct: 367 YHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGP-LEGIHVAAVSCGPWHTA 425

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           V+T  GQ+ ++G   +G LG GD    + P  V  + G      ACG WHT  + E
Sbjct: 426 VVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVE 481



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 121/258 (46%), Gaps = 42/258 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ +  V+ G  HT +++  GQ++ +G G  G LG G R + V TP  +  L+       
Sbjct: 411 GIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR-RSVSTPREVESLK------- 462

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G L T+G G  
Sbjct: 463 ----------------GLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK 505

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 506 GRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQLGN--P 563

Query: 379 QAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           QA+  +P  +E   L     + + CGA H AVLT   +V +WG    G+LG GD+ DR+ 
Sbjct: 564 QADGKLPVRVEGK-LSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSS 622

Query: 438 PSLV-PIHGFLPRNIACG 454
           P++V  +     +++ CG
Sbjct: 623 PTIVEALKDKQVKSVVCG 640



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 129/303 (42%), Gaps = 53/303 (17%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A G RH  +++  G+V+ WG    G+LG G    ++  P L+  L     E  A
Sbjct: 305 LDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVL-HPKLVDGLKNTNVELVA 363

Query: 267 SGKDRPLLVRQ--------GSVNSSGKAGRS------------------YVKEIACGGRH 300
            G+     V          GS ++ G  G                    +V  ++CG  H
Sbjct: 364 CGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWH 423

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI---- 356
           +AVVT +G L TFG G +G  GHG       P    SL  ++  + A G+WHT  +    
Sbjct: 424 TAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVM 483

Query: 357 --------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
                      G+++ +G    G+LG G  ++  VP  +   ++E    + V+CG   + 
Sbjct: 484 VGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCV-AALVEPNFCQ-VACGHSMTV 541

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA----CGWWHTLLLAET 464
            LT  G V + G   YGQLG     D  +P  V + G L +N      CG +H  +L   
Sbjct: 542 ALTTTGHVYTMGSPVYGQLG-NPQADGKLP--VRVEGKLSKNFVEELDCGAYHVAVLTSR 598

Query: 465 TQI 467
           T++
Sbjct: 599 TEV 601



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D   P    S + + V+ IA G  H   ++ +G V+ +G    G+LG GVD     PKL+
Sbjct: 292 DSFVPKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLV 351

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPSLV--PI 443
           +   L++   ++V+CG  HS  +T  G + +WG + +  G LG  +     +P  +  P+
Sbjct: 352 DG--LKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPL 409

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G     ++CG WHT ++  + Q+
Sbjct: 410 EGIHVAAVSCGPWHTAVVTSSGQL 433



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 25/162 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G V+  G    GQLG         
Sbjct: 511 GDKESRLVPTCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQLG--------- 561

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P         A GK   L VR       GK  +++V+E+ CG  H AV+T    + T+G
Sbjct: 562 NPQ--------ADGK---LPVR-----VEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWG 605

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  G+ GHG T+D+  P+   +L D QV+ +  G   T  I
Sbjct: 606 KGANGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAI 647



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 41/229 (17%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEG 242
           GD     +P  V    G++  + A G  HT  + ++            G+++ WG G +G
Sbjct: 447 GDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKG 506

Query: 243 QLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           +LG G +  ++VPT     C+           LV                 ++ACG   +
Sbjct: 507 RLGHGDKESRLVPT-----CV---------AALVEPNFC------------QVACGHSMT 540

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
             +T  G + T G  +YGQ G+   + +L       L    VE++  G +H   ++    
Sbjct: 541 VALTTTGHVYTMGSPVYGQLGNPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTE 600

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           VY +G    G+LG G     + P ++E   L+ K+ K V CG   +A +
Sbjct: 601 VYTWGKGANGRLGHGDTDDRSSPTIVEA--LKDKQVKSVVCGTSFTAAI 647


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 126/273 (46%), Gaps = 36/273 (13%)

Query: 196 DEFFTLSP--CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           DE   + P  C   +N  V+   V  G RHT  + D G V+  G    GQLG        
Sbjct: 18  DEEVVIEPRRCDFFINKNVR--DVGCGNRHTGFVLDDGTVYTCGCNDLGQLG-------- 67

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
                     H  S K +P  V        G      +  ++CG  H+  + D G + ++
Sbjct: 68  ----------HDKSRK-KPEQV--------GALDAQIIVAVSCGEAHTLALNDKGQVFSW 108

Query: 314 GWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G   +GQ G     D +R P    SL DIQ+ Q+A G  H++ +S E  +Y +G NQ+GQ
Sbjct: 109 GHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQ 168

Query: 373 LGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           LG G ++  E+ P+ +++  L       ++ G  HS  LT  G +  WG NK+GQLGL D
Sbjct: 169 LGLGSEKRKESAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLND 226

Query: 432 SIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
             DR+ P+L+  +       I CG  HT  L +
Sbjct: 227 ETDRSDPALLKSLRSQKIIYICCGEDHTAALTK 259



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 107/234 (45%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS    ++ WG    GQLGLGS  +    P       H  S    
Sbjct: 137 IQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAP------RHIKSLSGI 190

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
           P                     IA GG HS  +T +GA+  FGWG   +GQ G     D+
Sbjct: 191 PF------------------AHIAAGGGHSFALTISGAI--FGWGRNKFGQLGLNDETDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 SDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFE 290

Query: 389 TPILESKRAKVVSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H+ A +   G++ S+G    GQLG+G + ++  PS+V
Sbjct: 291 ---LMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 147/363 (40%), Gaps = 59/363 (16%)

Query: 42  IPARLCGGDSWKDVCGGGCG-----FALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
           I  R C     K+V   GCG     F L   + G + T G  +D GQ  L   K  + PE
Sbjct: 23  IEPRRCDFFINKNVRDVGCGNRHTGFVL---DDGTVYTCG-CNDLGQ--LGHDKSRKKPE 76

Query: 97  PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE--------CVPSAKVTRDFGSAGS 148
                    +V  + G AH +++ + G+V++WG                +V R+  S   
Sbjct: 77  QVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSD 136

Query: 149 FQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV 206
            Q  + + G   +L   +          +  +    S  R+ES            +P  +
Sbjct: 137 IQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKES------------APRHI 184

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
               G+    +AAGG H+  L+  G ++GWG    GQLGL                    
Sbjct: 185 KSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE----------------- 227

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
           + +  P L++  S+ S        +  I CG  H+A +T  G + TFG G YGQ GH S 
Sbjct: 228 TDRSDPALLK--SLRSQK------IIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSA 279

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
           + ++ P     LM   V QIA G  HT+  +   GR+Y FG    GQLG G    +  P 
Sbjct: 280 SHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPS 339

Query: 386 LLE 388
           +++
Sbjct: 340 MVK 342



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  + P      ++  V  +  G  HT  +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   D++   P+  +   L+++    VSCG  H+  L + GQV SWG   +GQ+
Sbjct: 61  NDLGQLGH--DKSRKKPE--QVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116

Query: 428 GLGDSID-----RNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           G+  + D     RNI SL  I       +ACG  H+L L++ + I
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIV---QVACGHHHSLALSKESNI 158


>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 416

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 144/294 (48%), Gaps = 43/294 (14%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
           C+  L P  K+   A G  HTL+ ++ G+V+  G   EGQLGLG   +   T HLI    
Sbjct: 80  CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGD-TEERSTFHLISFFT 137

Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
                 + +A       L   G +     NS G+ G   V                 I+C
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISC 197

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL----MDIQVEQIAAGLWH 352
           G  HSA VT  G L TFG     +CG     +QL  ++        +  +V Q+A G  H
Sbjct: 198 GYYHSAFVTTEGQLYTFGEP---ECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGH 254

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLT 411
           TV ++ E  VY FG  QFGQLG G    E +VPK +E   ++ ++   ++CG  H+A++T
Sbjct: 255 TVVLT-EKAVYTFGLGQFGQLGLGTFLFETSVPKAIEH--IKDQKISFIACGENHTALIT 311

Query: 412 EDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           + G + ++G  ++G+LGLG  +S ++ IP+L      F+ + ++CG  HTL+ A
Sbjct: 312 DMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 2/174 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+AVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G+VY  GGN  GQLG G D  E     L +     ++ K +S G+  SA LTED
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           G++  WG N  GQ+GL +  +  +P  V + G     I+CG++H+  +    Q+
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTV-GKPISWISCGYYHSAFVTTEGQL 211


>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
          Length = 364

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 119/257 (46%), Gaps = 32/257 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           +  V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L           
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK------- 129

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                            + +++CG  HS  ++    + ++G   +GQ G G     Q  P
Sbjct: 130 -----------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASP 172

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI- 391
               SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NVP     P+ 
Sbjct: 173 QRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL---SGRNVPVQSNKPLS 229

Query: 392 ---LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
              L++     +SCG  H+AVLT+DG+V ++G N+ GQLG   + ++  P LV     L 
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLV 289

Query: 449 RNIACGWWHTLLLAETT 465
             I CG +HTL    TT
Sbjct: 290 SQIDCGSYHTLAYVHTT 306



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 36/222 (16%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           ++TLN  +KI +V+ G  H+L LS   QV+ WG    GQLGLG       +P  +  LE 
Sbjct: 122 IMTLND-IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE- 179

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCG 322
                  PL                   ++A GG HS  ++  G   +FGWG    GQ  
Sbjct: 180 -----GIPL------------------AQVAAGGAHSFALSLCGT--SFGWGSNSAGQLA 214

Query: 323 HGSTN---DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
               N      +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N+ GQLG     
Sbjct: 215 LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTP 274

Query: 380 AENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
            +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 275 EKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 9/198 (4%)

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
           G D   L R+ +  S G    + + + A G RHS ++     +L+ G    GQ G     
Sbjct: 6   GADSRELQRRRTAGSPG----AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQ 61

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKL 386
               P    +L  + V+ ++ G  H++ +  +GRV+ +G    GQLG G   +    PK 
Sbjct: 62  RGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKK 121

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLV-PIH 444
           + T  L   +   VSCG  HS  L++D QV SWG N +GQLGLG     +  P  V  + 
Sbjct: 122 IMT--LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 445 GFLPRNIACGWWHTLLLA 462
           G     +A G  H+  L+
Sbjct: 180 GIPLAQVAAGGAHSFALS 197



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG    Q   +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLIVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      ++ ++      ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 99/182 (54%), Gaps = 4/182 (2%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
           A R  V+ I+CGGRH+A+VT  G + ++G    G+ GHG   D  +P    +L  + +E 
Sbjct: 346 AVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIEL 405

Query: 346 IAAGLWHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           +A G +HT  +++ G +Y +G    +FG LG G D +  VPK +  P LE      +SCG
Sbjct: 406 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGP-LEGIHVSSISCG 464

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
             H+AV+T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + 
Sbjct: 465 PWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVV 524

Query: 463 ET 464
           E 
Sbjct: 525 EV 526



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 49/272 (18%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  ++ GGRH  +++  G+++ WG    G+LG G     V  P LI  L H       
Sbjct: 349 LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD-VSQPKLIDALSHMN----- 402

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                              ++ +ACG  H+  VT +G L T+G G   +G  GHG+    
Sbjct: 403 -------------------IELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISH 443

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P + +  ++ I V  I+ G WHT  ++  G+++ FG   FG LG G  ++ +VP+ +E
Sbjct: 444 WVPKHVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVE 503

Query: 389 TPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLGDSIDRN 436
           +  L+  R    +CG  H+A + E             G++ +WG    G+LG GD   + 
Sbjct: 504 S--LKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKL 561

Query: 437 IPSLVPIHGFLPRN---IACGWWHTLLLAETT 465
           +P+ V     +  N   +ACG  H L +A TT
Sbjct: 562 VPTCVA--ALVEPNFCQVACG--HCLTVALTT 589



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R + +  P  +  L+       
Sbjct: 455 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDR-ESISVPREVESLK------- 506

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G + T+G G  
Sbjct: 507 ----------------GLRTVRA-ACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 549

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 550 GRLGHGDKGPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNA-- 607

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           QA+ +  +     L     + +SCGA H AVLT   +V +WG    G+LG GD+ D+N P
Sbjct: 608 QADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNTP 667

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     R + CG
Sbjct: 668 TLVEALKDKQVRIVVCG 684



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P      + + V+ I+ G  H   ++ +G +Y +G    G+LG GVD   + PKL+
Sbjct: 336 DCLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLI 395

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV--PI 443
           +   L     ++V+CG  H+  +T  G + +WG    K+G LG G+ I   +P  V  P+
Sbjct: 396 DA--LSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPL 453

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G    +I+CG WHT ++    Q+
Sbjct: 454 EGIHVSSISCGPWHTAVVTSAGQL 477



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 158/401 (39%), Gaps = 68/401 (16%)

Query: 35  KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
           K   L P P         +++  GG   AL T + G++ +WG   +E    L  G   + 
Sbjct: 334 KMDCLVPKPLEFAVRLDVQNISCGGRHAALVTKQ-GEIYSWG---EESGGRLGHGVDCDV 389

Query: 95  PEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
            +P  +   +  ++   A G  H  +VT +G++YTWG          T  FG  G     
Sbjct: 390 SQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWG--------DGTFKFGLLGHGNDI 441

Query: 153 S--TGKQSALPTEQAPPSDKRAG---EEVVKRRKTSSAREESENPAS------GDEFFTL 201
           S    K    P E    S    G     VV    TS+ +  +    S      GD     
Sbjct: 442 SHWVPKHVNGPLEGIHVSSISCGPWHTAVV----TSAGQLFTFGDGSFGVLGHGDRESIS 497

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR 249
            P  V    G++  + A G  HT  + ++            G+++ WG G +G+LG G +
Sbjct: 498 VPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDK 557

Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
                 P L+P    A        LV                 ++ACG   +  +T +G 
Sbjct: 558 -----GPKLVPTCVAA--------LVEPNFC------------QVACGHCLTVALTTSGH 592

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           + T G  +YGQ G+   +  L       L    VE+I+ G +H   ++ +  VY +G   
Sbjct: 593 VYTMGSAVYGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGA 652

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            G+LG G    +N P L+E   L+ K+ ++V CG   +A +
Sbjct: 653 NGRLGHGDTDDKNTPTLVEA--LKDKQVRIVVCGINFTAAI 691



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 25/165 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G V+  G    GQLG      M+P
Sbjct: 555 GDKGPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLP 614

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                    V   GK  +++V+EI+CG  H AV+T    + T+G
Sbjct: 615 -------------------------VRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWG 649

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            G  G+ GHG T+D+  P+   +L D QV  +  G+  T  I + 
Sbjct: 650 KGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCGINFTAAICIH 694


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 32/271 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            T SP +  L P      +A G +   ++S  G+V+  G G  G+LGLG     VP PH +
Sbjct: 3086 TFSPTISRLRP----IHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQL 3140

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            P L           +V++ +V+S              GG+H+  +T  G + ++G G  G
Sbjct: 3141 PVLHQ--------YVVKKVAVHS--------------GGKHALALTLDGKVFSWGEGEDG 3178

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            + GHG+ +   +P    +L   ++  IA G  H+  IS +G +Y +G  ++G+LG G + 
Sbjct: 3179 KLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3238

Query: 380  AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
             +  PKL+    L  +R   V+CG+R   +  LTEDG V SWG   +G+LG G S   + 
Sbjct: 3239 TQLKPKLVAA--LSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSST 3296

Query: 438  PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P  +  + G     I CG   +L L    ++
Sbjct: 3297 PHEIERLSGIGVIQIECGAQFSLALTRAGEV 3327



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 134/309 (43%), Gaps = 79/309 (25%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R+                   DR
Sbjct: 4301 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4343

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV   +  S        V +IACG  HSA +T +G +LT+G G YG+ GHG + DQLR
Sbjct: 4344 PKLVEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 4395

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 4396 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 4455

Query: 390  --------------------------------------------------PILESKRAKV 399
                                                                L+ K+   
Sbjct: 4456 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIIS 4515

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            ++ G+ H    ++ G+V +WG N  GQLG G       P LV  + G     + CG  HT
Sbjct: 4516 IATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHT 4575

Query: 459  LLLAETTQI 467
            L L+ T+Q+
Sbjct: 4576 LALS-TSQL 4583



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 129/301 (42%), Gaps = 78/301 (25%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R                 S  D+
Sbjct: 3148 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR-----------------STLDK 3190

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV               +++IACG  HSA ++  G L T+G G YG+ GHG    QL+
Sbjct: 3191 PRLVEALRAKK--------IRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 3242

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE- 388
            P   ++L   +V Q+A G     T+ ++ +G V+ +G   FG+LG G  +  + P  +E 
Sbjct: 3243 PKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIER 3302

Query: 389  -----------------------------------------------TPI--LESKRAKV 399
                                                            PI  L   R   
Sbjct: 3303 LSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIH 3362

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
            V+ GA H   +T+ GQV +WG N +GQ G G++     P+LV  +   +   +ACG  H+
Sbjct: 3363 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVIVNRVACGSSHS 3422

Query: 459  L 459
            +
Sbjct: 3423 M 3423



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 43/256 (16%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           GRH L +      + WG G   +LG G    + +PT      +E          LVR   
Sbjct: 655 GRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTK-----IES---------LVR--- 697

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                      VK + CG  +SA +T  G L T+G G YG+ GHG+++DQ  P+   +L 
Sbjct: 698 ----------LVKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALK 747

Query: 340 DIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           D QV  +A  +G  HT+C++ EG V+ +G   +G+LG G   +  +P+L++       R 
Sbjct: 748 DHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDC----LPRV 803

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-----IPSLVP-IHGFLPRNI 451
           + V  GA+ S  L+ +GQ+ SWG  K   LG    ++RN     +P L+  +      ++
Sbjct: 804 QRVFAGAQFSLALSCEGQLYSWG--KASCLG-HQLVERNVQGCSVPRLITGLQHKRIVDV 860

Query: 452 ACGWWHTLLLAETTQI 467
           A G  H L L+ + +I
Sbjct: 861 AVGVAHCLALSSSGEI 876



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 115/227 (50%), Gaps = 34/227 (14%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            ++GWG+   GQLG   GSRIK  PT    PC    A    RP+                 
Sbjct: 4216 IYGWGHNHRGQLGGLEGSRIK-TPT----PC---EALSLLRPV----------------- 4250

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--A 348
              ++A G +    VT  G L   G+G  G+ G G ++    P+   SL  + V+++A  +
Sbjct: 4251 --QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNS 4308

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G  H + ++ +G VY +G  + G+LG G   + + PKL+E   L       ++CG+ HSA
Sbjct: 4309 GGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH--LNGMSVADIACGSAHSA 4366

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
             +T  G VL+WG  +YG+LG GDS D+  P LV  + G+   +IACG
Sbjct: 4367 AITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4413



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 125/308 (40%), Gaps = 35/308 (11%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQA 165
            V   +G  HC+++T  GEVY WG  E        R         +   G   A +    A
Sbjct: 4304 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA 4363

Query: 166  PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGRH 223
              +   A   V+   K    R        GD    L P LV    G +   +A  +G   
Sbjct: 4364 HSAAITASGHVLTWGKGRYGRL-----GHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQ 4418

Query: 224  TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
            TL ++D   VW WG G  G+LG G                  + G   P  +        
Sbjct: 4419 TLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKLPYKIE------- 4454

Query: 284  GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              AG   +K + CG + S  +T +GA+ T+G G + + GHGS     RP   ++L   ++
Sbjct: 4455 SLAGLGVIK-VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKI 4513

Query: 344  EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
              IA G  H V  S  G V+ +G N  GQLG G   A   P+L+    L+ K    V+CG
Sbjct: 4514 ISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCG 4571

Query: 404  ARHSAVLT 411
            + H+  L+
Sbjct: 4572 SAHTLALS 4579



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 154/402 (38%), Gaps = 85/402 (21%)

Query: 32   SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
            S  K P  SP  +RL           GG       S+ GK+   G   +     L  G  
Sbjct: 3080 SKVKVPTFSPTISRL-----RPIHIAGGSKSLFVVSQDGKVYACGEGTN---GRLGLGVT 3131

Query: 92   GETPEPFPLPT-EASVVKAAA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
               P P  LP     VVK  A   G  H +++T  G+V++WG                 G
Sbjct: 3132 HNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG----------------EG 3175

Query: 148  SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS------------- 194
               K   G +S L        DK    E ++ +K       S + A+             
Sbjct: 3176 EDGKLGHGNRSTL--------DKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLG 3227

Query: 195  -------GDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLG 245
                   GD    L P LV    G ++ +VA G R   TL L++ G V+ WG G  G+LG
Sbjct: 3228 EYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3287

Query: 246  LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
             G   +   TPH I  L                    SG      V +I CG + S  +T
Sbjct: 3288 RGGS-EGSSTPHEIERL--------------------SGIG----VIQIECGAQFSLALT 3322

Query: 306  DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
             AG + T+G G Y + GHG      +P   + L   +V  +A G  H + ++  G+VY +
Sbjct: 3323 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAW 3382

Query: 366  GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            G N  GQ G+G       P L+    L++     V+CG+ HS
Sbjct: 3383 GDNDHGQQGSGNTFVNKKPALVIG--LDAVIVNRVACGSSHS 3422



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+++ ++  ++   IA G      +S +G+VY  G    G+LG GV    NVP   + P+
Sbjct: 3085 PTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPV 3142

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT DG+V SWG  + G+LG G+    + P LV  +     
Sbjct: 3143 LHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKI 3202

Query: 449  RNIACGWWHT 458
            R+IACG  H+
Sbjct: 3203 RDIACGSSHS 3212



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 66/222 (29%)

Query: 46   LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
            L G  +    CG G    L  ++   + +WG  D     Y   G+ G      P   E+ 
Sbjct: 4402 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4456

Query: 105  ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
                V+K   G    V++T++G VYTWG                 G F +   G      
Sbjct: 4457 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4494

Query: 162  TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
                         E V+R K  +A +                       G KI  +A G 
Sbjct: 4495 -----------SVEHVRRPKKVAALQ-----------------------GKKIISIATGS 4520

Query: 222  RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             H +  SD G+V+ WG   EGQLG G+ +  +  P L+  L+
Sbjct: 4521 LHCVACSDAGEVFTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4561



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 41/219 (18%)

Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           P +V      ++  VA  +G  HTL L+  G V+ WG G  G+LG GS       P LI 
Sbjct: 740 PAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGS-CNSSLLPQLID 798

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
           CL                            V+ +  G + S  ++  G L  + WG    
Sbjct: 799 CLPR--------------------------VQRVFAGAQFSLALSCEGQL--YSWGKASC 830

Query: 321 CGHGSTNDQLR----PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            GH      ++    P   + L   ++  +A G+ H + +S  G ++ +G N   Q+   
Sbjct: 831 LGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQICPA 890

Query: 377 VDQAENVPKLLETPI---LESKRAKVVSCGARHSAVLTE 412
              +E    LL  PI   L +  A  ++C A  S + T+
Sbjct: 891 SVCSE---PLLRQPIQVTLPTLPASGIACTAAQSLIWTQ 926



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
            G  F+LA S  G+L +WG A   G   +     G   P          +V  A G AHC
Sbjct: 808 AGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHC 867

Query: 117 VSVTEAGEVYTWG 129
           ++++ +GE++ WG
Sbjct: 868 LALSSSGEIFGWG 880


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 157/377 (41%), Gaps = 75/377 (19%)

Query: 25  WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
           WGY     P  SP L  I A  ++CG  S + V    CG   ++   E G++ T G  + 
Sbjct: 4   WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-VNT 62

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           +GQ  L   + G  PE      +  +V  A G +H +++++ G++++WG           
Sbjct: 63  KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGA---------- 110

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
              GS G       G  +   +   P   ++  ++ +   + S         A+  +FFT
Sbjct: 111 ---GSDGQL-----GLMTIEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160

Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
                              SP  V    G+ + +V AGG H+  LS  G V+GWG    G
Sbjct: 161 WGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAG 220

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           QLGL                      KDR  P  V+              V  I+CG  H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
           +AV+T +G + TFG G  GQ GH S ND++ P     LM  +V QIA G  HT+  +   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 360 GRVYVFGGNQFGQLGTG 376
           G +Y FG    GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 113/248 (45%), Gaps = 28/248 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  VA G  H+L LSD GQ++ WG G +GQLGL +    V  P LI              
Sbjct: 86  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQ------------- 132

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                      K  +  + +++CG  H   +   G   T+G   +GQ G G     Q  P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+ AG  H+  +S+ G V+ +G N  GQLG   ++    P      +L
Sbjct: 182 QRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
            +++   +SCG  H+AVLT+ G V ++G    GQLG     D   P  ++ + G     I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 452 ACGWWHTL 459
           ACG  HTL
Sbjct: 300 ACGRQHTL 307



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 120/262 (45%), Gaps = 48/262 (18%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VA GG H++ L + G+V+  G   +GQLG                  H   G ++P 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG------------------HEREG-NKP- 75

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
                     G     ++  +ACG  HS  ++D G L ++G G  GQ G  +  D +  P
Sbjct: 76  -------EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVP 128

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD---QA--ENVPKLL 387
                L    + Q++ G WH + ++ +G+ + +G N  GQLG G +   QA  + V  L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
             P+     A+VV+ GA HS  L+  G V  WG N  GQLGL D  DR      P H  L
Sbjct: 189 GIPL-----AQVVAGGA-HSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKL 238

Query: 448 PRN-----IACGWWHTLLLAET 464
            R      I+CG  HT +L ++
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKS 260



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 6/138 (4%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P     + D  V+++A G  H+V +  +G VY  G N  GQLG   ++  N P+  +   
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPE--QIGA 80

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLV-PIHGFLPR 449
           L  +    V+CG  HS  L++ GQ+ SWG    GQLGL    D   +P L+  ++     
Sbjct: 81  LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTIL 140

Query: 450 NIACGWWHTLLLAETTQI 467
            ++CG WH L LA   Q 
Sbjct: 141 QVSCGNWHCLALAADGQF 158


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 25/248 (10%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  ++ G  H++ +SD G ++ WG G EGQLG G+      TP  I              
Sbjct: 86  IVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKI-------------- 131

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRP 332
               G  N+        + +I+CG  HS  +++ G + ++G    GQ G GS   +Q  P
Sbjct: 132 ---TGLFNTK-------IIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATP 181

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL  I + Q+ AG   +  +S+ G V+ +G N  GQLG   D  +   K      L
Sbjct: 182 QLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSL 241

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA 452
            +     +SCG  H+AVL++DG V ++G + +GQLG       ++P  +  +      +A
Sbjct: 242 RNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAGQVSQVA 301

Query: 453 CGWWHTLL 460
           CG +HTLL
Sbjct: 302 CGRYHTLL 309



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 87/157 (55%), Gaps = 14/157 (8%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++++CG +H+  + + G LL+ G   YGQ G  S N  +     SSL    +  I+ G 
Sbjct: 36  VQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNSSIEQ--ISSLEAQTIVDISCGT 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PK----LLETPILESKRAKVVSCGAR 405
            H+V +S EG +Y +G    GQLGTG   + N  PK    L  T I++      +SCG  
Sbjct: 94  NHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQ------ISCGNF 147

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDS-IDRNIPSLV 441
           HS  L+EDG+V SWG NK GQLGLG   I++  P LV
Sbjct: 148 HSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLV 184



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 37/247 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
             KI +++ G  H+L LS+ G+V+ WG    GQLGLGS+I    TP L+  L      K 
Sbjct: 136 NTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSL------KG 189

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS--TND 328
            PL+                  ++  GG  S  ++ +G +  +G    GQ G  S     
Sbjct: 190 IPLV------------------QVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKG 231

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             +P   +SL ++ V  I+ G  HT  +S +G VY FG +  GQLG       +VP+ +E
Sbjct: 232 TFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIE 291

Query: 389 TPILESKRAKVVSCGARHSAVLTED-GQVLSWGWNKYGQLGLGD----SIDRNIPSLVPI 443
                + +   V+CG  H+ +      +++S+G    G L   D    S +  +PS   I
Sbjct: 292 D---YAGQVSQVACGRYHTLLYVFSCNRIVSFG---KGSLRPQDNTECSDEAELPSEFDI 345

Query: 444 HGFLPRN 450
              +P N
Sbjct: 346 SSLVPTN 352



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 124/322 (38%), Gaps = 94/322 (29%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWAH 115
           G   ++A S+ G + +WG    EGQ  L +G       TP+         +++ + G  H
Sbjct: 92  GTNHSVAVSDEGSIYSWGDGS-EGQ--LGTGNLSSRNFTPKKITGLFNTKIIQISCGNFH 148

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
            ++++E G V++WG  +C          G  G       G Q      QA P       +
Sbjct: 149 SLALSEDGRVFSWGQNKC----------GQLG------LGSQI---INQATP-------Q 182

Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
           +VK  K                             G+ + +V AGG  +  LS  G V+ 
Sbjct: 183 LVKSLK-----------------------------GIPLVQVTAGGSQSFALSMSGTVFA 213

Query: 236 WGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
           WG    GQLG  S  +K    PH                     +VNS    G +Y   I
Sbjct: 214 WGKNNAGQLGFKSDPMKGTFKPH---------------------AVNSLRNLGVAY---I 249

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           +CG  H+AV++  G++ TFG   +GQ G  S N    P         QV Q+A G +HT+
Sbjct: 250 SCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAG-QVSQVACGRYHTL 308

Query: 355 CISVEGRVYVFGGNQFGQLGTG 376
                  +YVF  N+    G G
Sbjct: 309 -------LYVFSCNRIVSFGKG 323



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 6/123 (4%)

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
           V++++ G  HT+ +  +G +   G N +GQLG    +  N   + +   LE++    +SC
Sbjct: 36  VQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLG----RKSNNSSIEQISSLEAQTIVDISC 91

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI--PSLVPIHGFLPRNIACGWWHTLL 460
           G  HS  ++++G + SWG    GQLG G+   RN     +  +       I+CG +H+L 
Sbjct: 92  GTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLA 151

Query: 461 LAE 463
           L+E
Sbjct: 152 LSE 154


>gi|148681378|gb|EDL13325.1| regulator of chromosome condensation 2 [Mus musculus]
          Length = 498

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H A  
Sbjct: 123 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEALSHEA-- 179

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +TD G++  FG    GQ G G+  D
Sbjct: 180 ----------------------IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTD 217

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 218 AV-PSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 276

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 277 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 336

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 337 RLGHAEQKDEMVPRLVKLFDF 357



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 136/336 (40%), Gaps = 68/336 (20%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L+D G V+ +G    GQLG
Sbjct: 152 RNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLG 211

Query: 246 LGSRIKMVPTPHLI-----PCLEHAASGKDRPLLVRQGSV-------------NSSGK-- 285
           LG++   VP+P  I     P  + A   +   L+  +G++             NS GK  
Sbjct: 212 LGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFI 271

Query: 286 -------------------------------AGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                               V+++ACG  H+ V+     + ++G
Sbjct: 272 ARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWG 331

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G YG+ GH    D++ P     L D       QI AG   +  +S  G ++ +G     
Sbjct: 332 FGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTS 390

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN-KYGQLGLG 430
           +      ++   PK ++   L   R + ++CG + S ++  D   +SWG +  +G+LG G
Sbjct: 391 R------ESTMYPKAVQD--LCGWRIRSLACG-KSSIIVAADESTISWGPSPTFGELGYG 441

Query: 431 DSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLAE 463
           D   ++  +   +  + G     +A G+ H+L++A 
Sbjct: 442 DHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIAR 477


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 162/378 (42%), Gaps = 69/378 (18%)

Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL--PT 162
           +V+  A G  H V +T +G  +++G          + D+G  G       G   AL  P 
Sbjct: 43  AVISVACGDQHSVFITASGRTFSFG----------SNDYGQLGH------GHTKALVNPR 86

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASG-----------DEFFTLSPCLVTLNPG 211
                 DKRA      R  T  A ++ +  A G              +   P LV    G
Sbjct: 87  CVKALKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNG 146

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           V++  + AG  H+L LS  G V+ WG    GQLGLG +                   K R
Sbjct: 147 VQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRK-------------------KQR 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            L V+   + + GKA       I+ G  HSA V   G L TFG   +G+ G      + R
Sbjct: 188 KLPVQ---LKTEGKA-----IAISAGAYHSAYVNTDGVLYTFGETEHGKLGTNLAPKKCR 239

Query: 332 PSYASSLMDIQ--VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG--VDQAENVPKLL 387
               S + DIQ  V  +A G  HTV ++ +GR Y FG    GQLG G  V  A   P L+
Sbjct: 240 K--PSKVPDIQGLVTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGR-PHLI 296

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD---SIDRNIPSLVPIH 444
           + P     +   VS G  H+A L+E  Q+ + G  ++G+L L D     ++  P LV I 
Sbjct: 297 QMPT--GVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKLALEDGEMGSNKFSPMLVDIL 354

Query: 445 G-FLPRNIACGWWHTLLL 461
             F  + ++CG  HTL+L
Sbjct: 355 SLFQVQQVSCGGCHTLVL 372



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 118/308 (38%), Gaps = 92/308 (29%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   +LA S  G +  WGS++  GQ  L  G+  +   P  L TE   +  +AG  H   
Sbjct: 155 GADHSLALSAKGIVYLWGSSE-HGQ--LGLGRKKQRKLPVQLKTEGKAIAISAGAYHSAY 211

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           V   G +YT                     F +   GK   L T  AP           K
Sbjct: 212 VNTDGVLYT---------------------FGETEHGK---LGTNLAPK----------K 237

Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK--ITKVAAGGRHTLILSDMGQVWGW 236
            RK S                          P ++  +T VA GG HT+ L+  G+ + +
Sbjct: 238 CRKPSKV------------------------PDIQGLVTSVACGGSHTVALTCDGRAYSF 273

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G +GQLGLG R+     PHLI            P  V+   V+    AG+S       
Sbjct: 274 GDGSQGQLGLGQRVTHAGRPHLIQM----------PTGVKMARVS----AGQS------- 312

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQC----GHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
              H+A +++   + T G G +G+     G   +N +  P     L   QV+Q++ G  H
Sbjct: 313 ---HTAFLSEGRQMYTCGEGRHGKLALEDGEMGSN-KFSPMLVDILSLFQVQQVSCGGCH 368

Query: 353 TVCISVEG 360
           T+ + V G
Sbjct: 369 TLVLVVPG 376


>gi|348685253|gb|EGZ25068.1| hypothetical protein PHYSODRAFT_326137 [Phytophthora sojae]
          Length = 5016

 Score =  108 bits (269), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 122/262 (46%), Gaps = 26/262 (9%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---SRIKMVPTPHLIPCLEHAASG 268
           + I  V+ G  H  +++   +++ WG    GQLGLG   SR +    P  +       S 
Sbjct: 232 LSIAHVSCGKHHVAVITGQARLFTWGSNKYGQLGLGDFSSRTQ----PEEVHFALATLSS 287

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             R L V       + + G + V  +ACG  H+  VT    +L  G+   GQ G G    
Sbjct: 288 HRRALRVMH-----TVQHGGNNVTHVACGAAHTLFVTHQQQILGMGYNQAGQLGLGHRLQ 342

Query: 329 QLR------PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAE 381
           Q +      P    SL D  +  + AG  H+ C+   G VY +G    G+LG G + +  
Sbjct: 343 QYKGWRSCTPITVESLRDQSILDLGAGQNHSACVLSNGDVYTWGCGDDGRLGDGKLGEGV 402

Query: 382 NVPKLLETPILE--SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
            VP L+  P+L   S RA+ V CGARH AV+++   +  WG N +GQLG  D   R+ P 
Sbjct: 403 AVPTLI--PLLREASIRARTVRCGARHMAVISDSDLLYIWGANDFGQLGCKDRKPRSQPF 460

Query: 440 LV---PIHGFLPRNIACGWWHT 458
           L+   P+      ++A G +HT
Sbjct: 461 LLATPPLFAEGVEDVALGEFHT 482



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 105/421 (24%), Positives = 160/421 (38%), Gaps = 88/421 (20%)

Query: 59  GCGF---ALATSESGKLITWG--SADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAA 110
           GC F   A+A      L+ WG  S  + G   +TS    +    FPL  +    S+   +
Sbjct: 179 GCHFSVAAVAQPRGTTLLAWGLNSNGELGNGTMTSSPTPQMVVTFPLHFQREPLSIAHVS 238

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
            G  H   +T    ++TWG          +  +G  G     S  +   +    A  S  
Sbjct: 239 CGKHHVAVITGQARLFTWG----------SNKYGQLGLGDFSSRTQPEEVHFALATLSSH 288

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
           R    V+                               + G  +T VA G  HTL ++  
Sbjct: 289 RRALRVMH---------------------------TVQHGGNNVTHVACGAAHTLFVTHQ 321

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVP-----TPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            Q+ G GY   GQLGLG R++        TP  +  L      +D+ +L           
Sbjct: 322 QQILGMGYNQAGQLGLGHRLQQYKGWRSCTPITVESL------RDQSIL----------- 364

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMD--IQ 342
                  ++  G  HSA V   G + T+G G  G+ G G   + +  P+    L +  I+
Sbjct: 365 -------DLGAGQNHSACVLSNGDVYTWGCGDDGRLGDGKLGEGVAVPTLIPLLREASIR 417

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
              +  G  H   IS    +Y++G N FGQLG    +  + P LL TP L ++  + V+ 
Sbjct: 418 ARTVRCGARHMAVISDSDLLYIWGANDFGQLGCKDRKPRSQPFLLATPPLFAEGVEDVAL 477

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-----RNIACGWWH 457
           G  H+  +T  G+  +WG N      L  S   + P  +     LP     R ++CGW H
Sbjct: 478 GEFHTTCVTSAGKAYTWGLNLRDNSALVAS--HHTPQAID----LPEKERVRKVSCGWTH 531

Query: 458 T 458
           T
Sbjct: 532 T 532



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 50/259 (19%)

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
            WG    G+LG G+ +   PTP ++            PL  ++  ++         +  +
Sbjct: 197 AWGLNSNGELGNGT-MTSSPTPQMVVTF---------PLHFQREPLS---------IAHV 237

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-----------SYASSLMDIQ- 342
           +CG  H AV+T    L T+G   YGQ G G  + + +P           S+  +L  +  
Sbjct: 238 SCGKHHVAVITGQARLFTWGSNKYGQLGLGDFSSRTQPEEVHFALATLSSHRRALRVMHT 297

Query: 343 -------VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI-LES 394
                  V  +A G  HT+ ++ + ++   G NQ GQLG G    +       TPI +ES
Sbjct: 298 VQHGGNNVTHVACGAAHTLFVTHQQQILGMGYNQAGQLGLGHRLQQYKGWRSCTPITVES 357

Query: 395 KRAKVV---SCGARHSAVLTEDGQVLSWGWNKYGQLG---LGDSIDRNIPSLVPI---HG 445
            R + +     G  HSA +  +G V +WG    G+LG   LG+ +   +P+L+P+     
Sbjct: 358 LRDQSILDLGAGQNHSACVLSNGDVYTWGCGDDGRLGDGKLGEGV--AVPTLIPLLREAS 415

Query: 446 FLPRNIACGWWHTLLLAET 464
              R + CG  H  +++++
Sbjct: 416 IRARTVRCGARHMAVISDS 434



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 27/152 (17%)

Query: 343 VEQIAAGLWHTVCISVEGR---VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           V  +A+G   +V    + R   +  +G N  G+LG G   +   P+++ T  L  +R  +
Sbjct: 173 VSHLASGCHFSVAAVAQPRGTTLLAWGLNSNGELGNGTMTSSPTPQMVVTFPLHFQREPL 232

Query: 400 ----VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP---------------SL 440
               VSCG  H AV+T   ++ +WG NKYGQLGLGD   R  P               +L
Sbjct: 233 SIAHVSCGKHHVAVITGQARLFTWGSNKYGQLGLGDFSSRTQPEEVHFALATLSSHRRAL 292

Query: 441 VPIH-----GFLPRNIACGWWHTLLLAETTQI 467
             +H     G    ++ACG  HTL +    QI
Sbjct: 293 RVMHTVQHGGNNVTHVACGAAHTLFVTHQQQI 324


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 124/271 (45%), Gaps = 32/271 (11%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   T + +R P    SL DIQ+ QIA G +H++ +S    V+ +G N+ GQLG
Sbjct: 111 DTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170

Query: 375 TGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
            G + + ++ P+L+++  L       V+ G  HS VLT  G +  WG NK+GQLGL D  
Sbjct: 171 LGFELKRQSSPQLIKS--LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228

Query: 434 DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           DR +P+L+  +       I CG  HT  L +
Sbjct: 229 DRFVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 157/395 (39%), Gaps = 93/395 (23%)

Query: 53  KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
           K V   GCG    +   + G + T G  +D GQ  L   K  + PE        ++V  +
Sbjct: 34  KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
            G AH +++ + G+VY WG                        T  Q  LP         
Sbjct: 91  CGEAHTLALNDKGQVYAWGL----------------------DTDGQLGLP--------- 119

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
                                   G E +   P  +     ++I ++A G  H+L LS  
Sbjct: 120 ------------------------GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKG 155

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            +V+ WG    GQLGLG  +K   +P LI  L                        G  +
Sbjct: 156 SEVFSWGQNKHGQLGLGFELKRQSSPQLIKSL-----------------------LGIPF 192

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
             ++A GG HS V+T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  
Sbjct: 193 T-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICC 249

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH- 406
           G  HT  ++ EG V+ FG   +GQLG      E  P K+ E   L       ++CG +H 
Sbjct: 250 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQIACGRQHT 306

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V+ +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  I       IACG++H+L L++ +++
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIV---QIACGYYHSLALSKGSEV 158


>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 419

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 42/262 (16%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDR 271
           K+ +++AG  H+  ++  G+++ WG    GQLGLG S  K+V TP  +  L         
Sbjct: 120 KVVQISAGNHHSCAVTADGELFVWGKNSSGQLGLGKSAGKVVSTPRKVDYLAD------- 172

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS------ 325
              VR              VK  A G  HS VVT+ G  L++G    G+ GHG       
Sbjct: 173 ---VR--------------VKMTALGSEHSIVVTEDGEALSWGAAGGGRLGHGHKSSFLG 215

Query: 326 ---TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
              T+++  P    +L  I++++IAAG+ H+ CI  +G V++FG      LG   D    
Sbjct: 216 FAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEKGTVFIFGQKTEKVLGRSNDAPR- 274

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            P ++E    E + ++ V+CG  H+  +T+ G + SWG N+ G LGLG +     P +V 
Sbjct: 275 -PSVVE----EIQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLGLGGTGMVRFPEVVS 329

Query: 443 IHGF-LP-RNIACGWWHTLLLA 462
              F LP   ++CGW HT +++
Sbjct: 330 SSLFKLPVSKVSCGWKHTAVIS 351



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 181/454 (39%), Gaps = 108/454 (23%)

Query: 32  SPEKSPILSPIPAR-----LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL 86
           SP   P     PA       CGG     +  GG  FA   ++ G+L    S         
Sbjct: 54  SPTACPFFLARPADPPASLSCGGAHTLFLTEGGRVFATGLNDFGQLGIGSSMPHTLDPVE 113

Query: 87  TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
            SG H              VV+ +AG  H  +VT  GE++ WG                 
Sbjct: 114 VSGFH------------EKVVQISAGNHHSCAVTADGELFVWG----------------- 144

Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV 206
               K+S+G+             K AG+ V   RK     +                   
Sbjct: 145 ----KNSSGQLGL---------GKSAGKVVSTPRKVDYLAD------------------- 172

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
                V++   A G  H++++++ G+   WG  G G+LG G +   +             
Sbjct: 173 -----VRVKMTALGSEHSIVVTEDGEALSWGAAGGGRLGHGHKSSFLGFA--------MT 219

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
           S +  P L++    N  G      +K IA G  HSA + + G +  FG       G   +
Sbjct: 220 SNEYTPRLIK----NLDGIK----IKRIAAGMLHSACIDEKGTVFIFGQKTEKVLGR--S 269

Query: 327 NDQLRPSYASSLMDIQV-EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
           ND  RPS    + +IQ  E++A G +HT  ++  G +Y +G N+ G LG G       P+
Sbjct: 270 NDAPRPSV---VEEIQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLGLGGTGMVRFPE 326

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW------------NKYGQLGLGDSI 433
           ++ + + +   +K VSCG +H+AV++ +  + +WGW            +  GQLG G+ +
Sbjct: 327 VVSSSLFKLPVSK-VSCGWKHTAVISGE-DIYTWGWGGANGTFFEEGHSSGGQLGHGNDV 384

Query: 434 DRNIPSLVPIH-GFLPRNIACGWWHTLLLAETTQ 466
           D   P +V +H      +++CG+ HT  + E  +
Sbjct: 385 DYCEPMMVELHKNARAVHVSCGFNHTGAILEYAE 418



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 34/243 (13%)

Query: 236 WGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
           WG G  G+LGLG+   +  PT     C    A   D P                     +
Sbjct: 36  WGNGDHGRLGLGALESRWSPTA----CPFFLARPADPP-------------------ASL 72

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           +CGG H+  +T+ G +   G   +GQ G GS+          S    +V QI+AG  H+ 
Sbjct: 73  SCGGAHTLFLTEGGRVFATGLNDFGQLGIGSSMPHTLDPVEVSGFHEKVVQISAGNHHSC 132

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
            ++ +G ++V+G N  GQLG G    + V    +   L   R K+ + G+ HS V+TEDG
Sbjct: 133 AVTADGELFVWGKNSSGQLGLGKSAGKVVSTPRKVDYLADVRVKMTALGSEHSIVVTEDG 192

Query: 415 QVLSWGWNKYGQLG-------LGDSIDRN--IPSLVP-IHGFLPRNIACGWWHTLLLAET 464
           + LSWG    G+LG       LG ++  N   P L+  + G   + IA G  H+  + E 
Sbjct: 193 EALSWGAAGGGRLGHGHKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEK 252

Query: 465 TQI 467
             +
Sbjct: 253 GTV 255


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 124/280 (44%), Gaps = 44/280 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P ++      ++ +VA G   +  L + GQ++ WG    GQLG G R      P ++P 
Sbjct: 151 TPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSA-IPRMLPS 209

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           + H                         +V  +ACG  H  V+T +  + T+G   YGQ 
Sbjct: 210 MNH------------------------RHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQL 245

Query: 322 GHGSTNDQ-LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
           GHG      L+P     +  + ++QI AG  H+  ++  G +Y +G   FGQLG G  ++
Sbjct: 246 GHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMES 305

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           +++P LL +P+    +A ++  GA     +T  G V SWG N +GQLG G  +  +  + 
Sbjct: 306 KDIPTLL-SPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNR 364

Query: 441 VPIHGFLPR-----------------NIACGWWHTLLLAE 463
            P     P+                 +I+CG  H L + E
Sbjct: 365 FPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITE 404



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 101/232 (43%), Gaps = 28/232 (12%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ I  +  G  H L L   G++  WG G  GQLG  S      TP +I  L        
Sbjct: 108 GLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHAS-FSHSSTPSIIDEL-------- 158

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                               VKE+ACG   SA + + G L T+G   YGQ G G      
Sbjct: 159 ----------------ASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSA 202

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLET 389
            P    S+    V  +A G  H V ++    VY +G N +GQLG G  +   + PK +  
Sbjct: 203 IPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVR- 261

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            ++     K +  G  HS V+T  G + +WG   +GQLG GD   ++IP+L+
Sbjct: 262 -VMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLL 312



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 9/150 (6%)

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           G  ST +  RP    SL  + ++ I  G  H + +   G++  +G  + GQLG       
Sbjct: 90  GRFSTYNSQRPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHS 149

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD----SIDRNI 437
           + P +++   L S+R K V+CG   SA L E GQ+ +WG N+YGQLG GD    +I R +
Sbjct: 150 STPSIIDE--LASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRML 207

Query: 438 PSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           PS+   H  L   +ACG  H ++L  +  +
Sbjct: 208 PSMNHRHVHL---MACGAAHIVVLTTSRDV 234



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 148/404 (36%), Gaps = 67/404 (16%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G    LA   SGK+ +WG  +  GQ    S  H  TP          V + A G A   +
Sbjct: 117 GSDHVLALDASGKIRSWGRGE-SGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAA 175

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-GEEVV 177
           + E G++YTWG             +G  G   + S+     LP+         A G   +
Sbjct: 176 LMEGGQLYTWGCNR----------YGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHI 225

Query: 178 KRRKTSSAREESENPASGD------EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
               TS       N + G       +   L P  V +  G+ I ++ AG  H+ +++  G
Sbjct: 226 VVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFG 285

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
            ++ WG G  GQLG G                     KD P L+       S    ++  
Sbjct: 286 DIYTWGRGDFGQLGHGD-----------------MESKDIPTLL-------SPLDPKTQA 321

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST----------NDQLRPSYASSLM-- 339
             I  G      +T +GA+ ++G   +GQ GHG            +D + P   S     
Sbjct: 322 SLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAAS 381

Query: 340 ----DIQVEQIAAGLWHTVCIS-VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
                I +  I+ G  H + I+  +  ++ +G  + GQLG         P   E   ++ 
Sbjct: 382 EEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKG 441

Query: 395 KRAKVVSCGARHSAVLTE--------DGQVLSWGWNKYGQLGLG 430
                 +C   HS V+          D +V SWG   +GQLG G
Sbjct: 442 MIVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYG 485



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 128/347 (36%), Gaps = 36/347 (10%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G  F+ A  E G+L TWG  +  GQ           P   P      V   A G AH V 
Sbjct: 169 GVAFSAALMEGGQLYTWG-CNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVV 227

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           +T + +VYTWG        ++   F      Q  S    S L  +Q    +  +      
Sbjct: 228 LTTSRDVYTWGNNSY---GQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSF 284

Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
               +  R +      GD      P L++ L+P  + + + +G    + ++  G V+ WG
Sbjct: 285 GDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWG 344

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY----VKE 293
               GQLG G  +             H +     P  V    + S   A   +    +  
Sbjct: 345 RNCFGQLGHGVDM-------------HYSKSNRFPSDVISPKIISFFAASEEHDAISLSS 391

Query: 294 IACGGRHSAVVTD-AGALLTFGWGLYGQCGHGSTNDQLR--PSYASSLMDIQVEQIAAGL 350
           I+CG  H   +T+    L  +G G +GQ G    +   R  P     +  + V   A   
Sbjct: 392 ISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSE 451

Query: 351 WHTVCISV--------EGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            H+V ++         + +V+ +G   FGQLG G   +  VP + ET
Sbjct: 452 NHSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYG---SGKVPVMKET 495


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 124/271 (45%), Gaps = 32/271 (11%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   T + +R P    SL DIQ+ QIA G +H++ +S    V+ +G N+ GQLG
Sbjct: 111 DTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170

Query: 375 TGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
            G + + ++ P+L+++  L       V+ G  HS VLT  G +  WG NK+GQLGL D  
Sbjct: 171 LGFELKRQSSPQLIKS--LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228

Query: 434 DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           DR +P+L+  +       I CG  HT  L +
Sbjct: 229 DRFVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 157/395 (39%), Gaps = 93/395 (23%)

Query: 53  KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
           K V   GCG    +   + G + T G  +D GQ  L   K  + PE        ++V  +
Sbjct: 34  KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
            G AH +++ + G+VY WG                        T  Q  LP         
Sbjct: 91  CGEAHTLALNDKGQVYAWGL----------------------DTDGQLGLP--------- 119

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
                                   G E +   P  +     ++I ++A G  H+L LS  
Sbjct: 120 ------------------------GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKG 155

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            +V+ WG    GQLGLG  +K   +P LI  L                        G  +
Sbjct: 156 SEVFSWGQNKHGQLGLGFELKRQSSPQLIKSL-----------------------LGIPF 192

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
             ++A GG HS V+T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  
Sbjct: 193 T-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICC 249

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH- 406
           G  HT  ++ EG V+ FG   +GQLG      E  P K+ E   L       ++CG +H 
Sbjct: 250 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQIACGRQHT 306

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V+ +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  I       IACG++H+L L++ +++
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQ---IVQIACGYYHSLALSKGSEV 158


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 135/437 (30%), Positives = 179/437 (40%), Gaps = 67/437 (15%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G  F LA    G + +WG A+  GQ  L  G   +   P  +PT + +   AAG  H V+
Sbjct: 225 GFDFTLAVHADGAVSSWG-ANSFGQ--LGLGTFTQRLSPERIPTLSGITSVAAGTYHAVA 281

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           + + G V+TWG               S+G    D T    A+P   AP         V  
Sbjct: 282 LGKDGTVWTWG-------------SNSSGQL-GDGTWNDRAVP---APLPGVGGARAVAS 324

Query: 179 RRKTSSAREE-----------SENPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLI 226
               S A  E           S     GD     +P LV   P +  +T V  G +H L 
Sbjct: 325 LDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLV---PELSAVTAVVGGAQHALA 381

Query: 227 LSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHL-IPCLEHAASGKDRPLL-VRQGSV--- 280
           L   G +W WG G  GQLG G S   +VP   + +  +   A+G    L  +  GSV   
Sbjct: 382 LRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTSMATGSFHSLAALEDGSVWAW 441

Query: 281 --NSSGKAGRSYVKE---------------IACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
             NS G+ G   V E               +A  G HS  V   G + T+G    GQ G 
Sbjct: 442 GRNSYGQLGDGTVTERHVPVRVPGLPSVRAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGD 501

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G+T D+ RP   S L    V  IAAG  H + +  +G V+ +G N  GQLG G    +  
Sbjct: 502 GTTRDRARPVAVSGL--TSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLT 559

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           P  +  P L   ++  V+ G   S  L  DG V +WG    GQLG G  + R  P  V +
Sbjct: 560 P--VRVPGLAPIQS--VAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQRLSP--VAV 613

Query: 444 HGFLP-RNIACGWWHTL 459
            G    RNI+ G  H L
Sbjct: 614 KGLSDIRNISVGSAHAL 630



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 177/432 (40%), Gaps = 52/432 (12%)

Query: 43   PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
            P R+ G +    V GGG   +LA    G +  WG A+  GQ  +  G   +   P  +  
Sbjct: 860  PGRVEGLEGIVAVAGGGD-TSLALRSDGTVWAWG-ANASGQ--VGDGTVEDRLTPRRIEA 915

Query: 103  EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
             + V+  A G +H ++V E G V+ WG       A  +   G  G        +   L  
Sbjct: 916  LSDVMVIALGESHALAVGEDGTVWAWG-------ANASGQLGDGGETPSLLPARVKGLEG 968

Query: 163  EQAPPSDKRAGEEVVKRRKTSSA--REESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
              +  +  RA    V+   T+ A    ES     G       P  V    G++   V+AG
Sbjct: 969  VGSVAA-GRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVASVKGLR--AVSAG 1025

Query: 221  GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---EHAASGKDRPLLVRQ 277
              H + L + G VW WG    GQLG G+    V  P  +  L   E  A+G+   + V  
Sbjct: 1026 AHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVESVAAGEQFSVAVAH 1085

Query: 278  GSVNSS-----------GKAG-RSYVKEIACGG-------------RHSAVVTDAGALLT 312
                 S           GK G R    E+  GG             +H+  +   G L  
Sbjct: 1086 DGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQA 1145

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G    GQ G G+T  +  P     +   +V  ++ G WH++ + ++G V+ +G N FGQ
Sbjct: 1146 WGDNATGQLGDGTTTRRSSPGEIRGV--TRVTAVSTGAWHSLALRLDGTVWAWGANGFGQ 1203

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
            LG G   A  VP     P+   +    ++ G  HS  +  DG V +WG+N +GQLG G S
Sbjct: 1204 LGDGTTTARAVP----VPVQGLRDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTS 1259

Query: 433  IDRNIPSLVPIH 444
              R +P  V +H
Sbjct: 1260 ESRALP--VQVH 1269



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 176/438 (40%), Gaps = 61/438 (13%)

Query: 32  SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
           SPE+ P LS I +              G   A+A  + G + TWGS +  GQ  L  G  
Sbjct: 259 SPERIPTLSGITS-----------VAAGTYHAVALGKDGTVWTWGS-NSSGQ--LGDGTW 304

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            +   P PLP        A+  A  +++ E G+V  WG            + G  G    
Sbjct: 305 NDRAVPAPLPGVGGARAVASLDAGSLALLEGGDVLAWG----------ANNSGQLGDGDT 354

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA-----SGDEFFTLSPCLV 206
                 S +P   A  +     +  +  RK  +        A      G E   +   ++
Sbjct: 355 ADRSTPSLVPELSAVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVM 414

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLE 263
            L     +T +A G  H+L   + G VW WG    GQLG G+   R   V  P L     
Sbjct: 415 GLT---NVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPSVRA 471

Query: 264 HAASGKDRPLLVRQGSV-----NSSGK---------------AGRSYVKEIACGGRHSAV 303
            AA+G     +   G+V     N++G+               +G + V  IA GG H   
Sbjct: 472 VAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLAIAAGGSHVLA 531

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           +   G +  +G+   GQ G G++ D+L P     L  IQ   +AAG + ++ ++ +G V+
Sbjct: 532 LRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPGLAPIQ--SVAAGTYFSMALANDGTVW 589

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
            +G    GQLG G      V +L    +      + +S G+ H+  +  DG V +WG N 
Sbjct: 590 TWGEGFEGQLGDG----GGVQRLSPVAVKGLSDIRNISVGSAHALAVRGDGTVWAWGDNN 645

Query: 424 YGQLGLGDSIDRNIPSLV 441
            GQLG G  +DR  P  V
Sbjct: 646 EGQLGDGSWMDRFAPVQV 663



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 165/425 (38%), Gaps = 84/425 (19%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  E G ++ WG A++ GQ  L  G   +   P  +P  ++V     G  H +++ + 
Sbjct: 329 SLALLEGGDVLAWG-ANNSGQ--LGDGDTADRSTPSLVPELSAVTAVVGGAQHALALRKD 385

Query: 123 GEVYTWGW------------RECVP---------SAKVTRDFGSAGSFQKDST---GKQS 158
           G ++ WG             R  VP         ++  T  F S  + +  S    G+ S
Sbjct: 386 GTLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTSMATGSFHSLAALEDGSVWAWGRNS 445

Query: 159 -------------------ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--GDE 197
                               LP+ +A  +   AG   +      +      N A   GD 
Sbjct: 446 YGQLGDGTVTERHVPVRVPGLPSVRAVAA---AGHHSIAVAMDGTVWTWGRNAAGQLGDG 502

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
                   V ++    +  +AAGG H L L   G VW WGY   GQLG G+    + TP 
Sbjct: 503 TTRDRARPVAVSGLTSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKL-TPV 561

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
            +P L                          + ++ +A G   S  + + G + T+G G 
Sbjct: 562 RVPGL--------------------------APIQSVAAGTYFSMALANDGTVWTWGEGF 595

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
            GQ G G    +L P     L DI+   I+ G  H + +  +G V+ +G N  GQLG G 
Sbjct: 596 EGQLGDGGGVQRLSPVAVKGLSDIR--NISVGSAHALAVRGDGTVWAWGDNNEGQLGDG- 652

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
                + +     +        VS G  HS  L  DG V +WG N YGQLG G    R +
Sbjct: 653 ---SWMDRFAPVQVRNLTGITAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVL 709

Query: 438 PSLVP 442
           PS++P
Sbjct: 710 PSVIP 714



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 106/231 (45%), Gaps = 35/231 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDR 271
            +  VAAG  H+L+L   G VW WG    GQLG G ++  + P P  +P LE        
Sbjct: 168 DVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKP--VPGLEG------- 218

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                              V  +A G   +  V   GA+ ++G   +GQ G G+   +L 
Sbjct: 219 -------------------VVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRLS 259

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P    +L  I    +AAG +H V +  +G V+ +G N  GQLG G      VP     P+
Sbjct: 260 PERIPTLSGI--TSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPA----PL 313

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
                A+ V+     S  L E G VL+WG N  GQLG GD+ DR+ PSLVP
Sbjct: 314 PGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVP 364



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 180/440 (40%), Gaps = 61/440 (13%)

Query: 10   ENEKMEECKETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
            E+  +   ++  V+ WG    G   +     S +PAR+ G +    V  G   F+LA  +
Sbjct: 926  ESHALAVGEDGTVWAWGANASGQLGDGGETPSLLPARVKGLEGVGSVAAGRA-FSLAVRD 984

Query: 69   SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
             G    WG A++ GQ  L  G +     P  + +   +   +AG  H +++ E G V+ W
Sbjct: 985  DGTAWAWG-ANESGQ--LGDGSNQSRRVPHRVASVKGLRAVSAGAHHAMALGEDGAVWAW 1041

Query: 129  GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR---AGEE---VVKRRKT 182
            G               + G     ++      P   A  SD     AGE+    V    T
Sbjct: 1042 G-------------DNTLGQLGDGTSAFTVMWPQRVAELSDVESVAAGEQFSVAVAHDGT 1088

Query: 183  SSAREESENPASGDEFF--TLSPCLVTL--NPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
            + +   +E    GD      LSP  V +  +    +  V A G+H + L   G +  WG 
Sbjct: 1089 AFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGD 1148

Query: 239  GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
               GQLG G+  +                 +  P  +R          G + V  ++ G 
Sbjct: 1149 NATGQLGDGTTTR-----------------RSSPGEIR----------GVTRVTAVSTGA 1181

Query: 299  RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
             HS  +   G +  +G   +GQ G G+T  +  P     L D  V  IAAG +H+V +  
Sbjct: 1182 WHSLALRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQGLRD--VVAIAAGGYHSVAVRS 1239

Query: 359  EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            +G V+ +G N FGQLG G  ++  +P  ++   LE  +A  V+ G  HS  L  DG V  
Sbjct: 1240 DGTVWTWGYNTFGQLGDGTSESRALP--VQVHKLEGVQA--VTGGDHHSLALHADGTVSG 1295

Query: 419  WGWNKYGQLGLGDSIDRNIP 438
            WG N  GQLG G   DR  P
Sbjct: 1296 WGHNASGQLGDGSRTDRYTP 1315



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 113/251 (45%), Gaps = 30/251 (11%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH---AASGKDRP 272
           ++AAG +H+L L+  G VW WG    GQLG         +P  +P LE      SG    
Sbjct: 70  RIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVLEDIVSVVSGDAHS 129

Query: 273 L-LVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGALL 311
           L L   G+V     NSSG+ G                + V  +A G  HS V+   G + 
Sbjct: 130 LALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTDVVAVAAGDFHSLVLKSDGTVW 189

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
            +G   +GQ G G T   L P     L    V  +AAG   T+ +  +G V  +G N FG
Sbjct: 190 AWGTNFHGQLGQGHTQTGLWPKPVPGLEG--VVALAAGFDFTLAVHADGAVSSWGANSFG 247

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G       P+ +  P L    +  V+ G  H+  L +DG V +WG N  GQLG G 
Sbjct: 248 QLGLGTFTQRLSPERI--PTLSGITS--VAAGTYHAVALGKDGTVWTWGSNSSGQLGDGT 303

Query: 432 SIDRNIPSLVP 442
             DR +P+ +P
Sbjct: 304 WNDRAVPAPLP 314



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 187/456 (41%), Gaps = 68/456 (14%)

Query: 22  VYMWGYLP------GTS-----PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
           V+ WGY        GTS     P + P L+PI +              G  F++A +  G
Sbjct: 538 VWAWGYNALGQLGDGTSGDKLTPVRVPGLAPIQS-----------VAAGTYFSMALANDG 586

Query: 71  KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
            + TWG    EGQ  L  G   +   P  +   + +   + G AH ++V   G V+ WG 
Sbjct: 587 TVWTWGEGF-EGQ--LGDGGGVQRLSPVAVKGLSDIRNISVGSAHALAVRGDGTVWAWG- 642

Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
                        G  GS+       Q    T     S  R+    +    T  A   + 
Sbjct: 643 ------DNNEGQLGD-GSWMDRFAPVQVRNLTGITAVSGGRSHSLALHADGTVRAWGSNG 695

Query: 191 NPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
               GD   T S  L ++ PG+  I  +  G  H L L     + GWGY   GQLGLG+ 
Sbjct: 696 YGQLGDGTLT-SRVLPSVIPGLSGIQALHPGHLHVLALHADKTLRGWGYNRFGQLGLGAA 754

Query: 250 IKMVPTPHL--IPCLEHAASGKDRPLLVR-QGSV-----NSSGKAGR------------- 288
                   +  I  +E  A+G+   LLVR  GSV     N+SG+ G              
Sbjct: 755 GWSARPVQVRGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGARAVTVR 814

Query: 289 --SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
             S  + +A GG+HS V+   G + T+G    GQ G G+T+ ++ P     L  I    +
Sbjct: 815 GVSCARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLEGIVA--V 872

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G   ++ +  +G V+ +G N  GQ+G G  +    P+ +E          V++ G  H
Sbjct: 873 AGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEAL----SDVMVIALGESH 928

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
           +  + EDG V +WG N  GQLG G       PSL+P
Sbjct: 929 ALAVGEDGTVWAWGANASGQLGDGG----ETPSLLP 960



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 171/438 (39%), Gaps = 70/438 (15%)

Query: 32  SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
           SP + P+L  I   +  GD+           +LA    G + TWGS +  GQ  L  G  
Sbjct: 109 SPARLPVLEDI-VSVVSGDA----------HSLALGADGTVWTWGS-NSSGQ--LGDGTT 154

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            +  EP  +     VV  AAG  H + +   G V+ WG          T   G  G    
Sbjct: 155 TDRAEPQRVEGFTDVVAVAAGDFHSLVLKSDGTVWAWG----------TNFHGQLGQGHT 204

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--GDEFFT--LSPCLVT 207
            +      +P  +   +     +  +      +      N     G   FT  LSP  + 
Sbjct: 205 QTGLWPKPVPGLEGVVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIP 264

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAA 266
              G  IT VAAG  H + L   G VW WG    GQLG G+   + VP P  +P      
Sbjct: 265 TLSG--ITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAP--LP------ 314

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
                            G  G   V  +  G   S  + + G +L +G    GQ G G T
Sbjct: 315 -----------------GVGGARAVASLDAG---SLALLEGGDVLAWGANNSGQLGDGDT 354

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
            D+  PS    L    V  +  G  H + +  +G ++ +GG   GQLG G  +   VP  
Sbjct: 355 ADRSTPSLVPELS--AVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPA- 411

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
               ++       ++ G+ HS    EDG V +WG N YGQLG G   +R++P  VP    
Sbjct: 412 ---TVMGLTNVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVP---G 465

Query: 447 LP--RNIACGWWHTLLLA 462
           LP  R +A    H++ +A
Sbjct: 466 LPSVRAVAAAGHHSIAVA 483



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 154/414 (37%), Gaps = 64/414 (15%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPLPTEASVVKAAAGWAHCV 117
            G   A+A  E G +  WG   D     L  G    T   P  +   + V   AAG    V
Sbjct: 1025 GAHHAMALGEDGAVWAWG---DNTLGQLGDGTSAFTVMWPQRVAELSDVESVAAGEQFSV 1081

Query: 118  SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----- 172
            +V   G  ++WG  E              G      TG + +    +   S  R      
Sbjct: 1082 AVAHDGTAFSWGSNEY-------------GQLGDGKTGPRLSPAEVKIGGSKARTVVTVG 1128

Query: 173  --GEEVVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
              G+  V      + +   +N     GD   T       +    ++T V+ G  H+L L 
Sbjct: 1129 AWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGVTRVTAVSTGAWHSLALR 1188

Query: 229  DMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
              G VW WG  G GQLG G+   + VP P                              G
Sbjct: 1189 LDGTVWAWGANGFGQLGDGTTTARAVPVP----------------------------VQG 1220

Query: 288  RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
               V  IA GG HS  V   G + T+G+  +GQ G G++  +  P     L  +Q   + 
Sbjct: 1221 LRDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALPVQVHKLEGVQA--VT 1278

Query: 348  AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH 406
             G  H++ +  +G V  +G N  GQLG G       P +L +   L   RA     GA H
Sbjct: 1279 GGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDVDGLTEVRA-----GAAH 1333

Query: 407  SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF-LPRNIACGWWHTL 459
            +  L +DG V +WG N +GQLG G +  R      P+ G      I  G WH+ 
Sbjct: 1334 TVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPAATAIGAGAWHSF 1387



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 126/283 (44%), Gaps = 47/283 (16%)

Query: 213  KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC-------LEHA 265
             +  +A G  H L + + G VW WG    GQLG G       TP L+P        +   
Sbjct: 918  DVMVIALGESHALAVGEDGTVWAWGANASGQLGDGGE-----TPSLLPARVKGLEGVGSV 972

Query: 266  ASGKDRPLLVRQGSV------NSSGKAGRSY---------------VKEIACGGRHSAVV 304
            A+G+   L VR          N SG+ G                  ++ ++ G  H+  +
Sbjct: 973  AAGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVASVKGLRAVSAGAHHAMAL 1032

Query: 305  TDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
             + GA+  +G    GQ G G S    + P   + L D  VE +AAG   +V ++ +G  +
Sbjct: 1033 GEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSD--VESVAAGEQFSVAVAHDGTAF 1090

Query: 364  VFGGNQFGQLGTGVDQAENVPKL--LETPILESKRAKVVSCGA--RHSAVLTEDGQVLSW 419
             +G N++GQLG G    +  P+L   E  I  SK   VV+ GA  +H+  L  DG + +W
Sbjct: 1091 SWGSNEYGQLGDG----KTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAW 1146

Query: 420  GWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-IACGWWHTLLL 461
            G N  GQLG G +  R+ P    I G      ++ G WH+L L
Sbjct: 1147 GDNATGQLGDGTTTRRSSPG--EIRGVTRVTAVSTGAWHSLAL 1187



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 123/293 (41%), Gaps = 37/293 (12%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
            G E  +L P  V    GV    VAAG   +L + D G  W WG    GQLG GS  +   
Sbjct: 952  GGETPSLLPARVKGLEGVG--SVAAGRAFSLAVRDDGTAWAWGANESGQLGDGSN-QSRR 1008

Query: 255  TPHLIPC---LEHAASGKDRPL-LVRQGSV-----NSSGKAGR----------------S 289
             PH +     L   ++G    + L   G+V     N+ G+ G                 S
Sbjct: 1009 VPHRVASVKGLRAVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELS 1068

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
             V+ +A G + S  V   G   ++G   YGQ G G T  +L P+            +  G
Sbjct: 1069 DVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVG 1128

Query: 350  LW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
             W  H V +  +G +  +G N  GQLG G     + P      I    R   VS GA HS
Sbjct: 1129 AWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPG----EIRGVTRVTAVSTGAWHS 1184

Query: 408  AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTL 459
              L  DG V +WG N +GQLG G +  R +P  VP+ G      IA G +H++
Sbjct: 1185 LALRLDGTVWAWGANGFGQLGDGTTTARAVP--VPVQGLRDVVAIAAGGYHSV 1235



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 167/409 (40%), Gaps = 46/409 (11%)

Query: 62   FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP---TEASVVKAAAGWA-HCV 117
            F++A +  G   +WGS ++ GQ  L  GK G    P  +    ++A  V     W  H V
Sbjct: 1079 FSVAVAHDGTAFSWGS-NEYGQ--LGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAV 1135

Query: 118  SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
            ++   G +  WG          T   G   + ++ S G+   + T     S        +
Sbjct: 1136 ALMADGTLQAWG-------DNATGQLGDGTTTRRSSPGEIRGV-TRVTAVSTGAWHSLAL 1187

Query: 178  KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
            +   T  A   +     GD   T     V +     +  +AAGG H++ +   G VW WG
Sbjct: 1188 RLDGTVWAWGANGFGQLGDGTTTARAVPVPVQGLRDVVAIAAGGYHSVAVRSDGTVWTWG 1247

Query: 238  YGGEGQLGLG-SRIKMVPTP-HLIPCLEHAASGKDRPL-LVRQGSV-----NSSGKAGRS 289
            Y   GQLG G S  + +P   H +  ++    G    L L   G+V     N+SG+ G  
Sbjct: 1248 YNTFGQLGDGTSESRALPVQVHKLEGVQAVTGGDHHSLALHADGTVSGWGHNASGQLGDG 1307

Query: 290  Y---------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR--P 332
                            + E+  G  H+  +   G + T+G   +GQ G G T  ++R  P
Sbjct: 1308 SRTDRYTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVP 1367

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               S L       I AG WH+     E   + +G N  GQLG G    +N P+     + 
Sbjct: 1368 KPVSGLP--AATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVG----DNAPRAEPQRMK 1421

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
                 KV++ GA  S  +T++G ++SWG + +G LGLG    R  P  V
Sbjct: 1422 LLSGLKVIAGGADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRASPGRV 1470



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 154/405 (38%), Gaps = 57/405 (14%)

Query: 43  PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
           P  + G  S   +  GG    LA    G +  WG  +  GQ  L  G  G+   P  +P 
Sbjct: 510 PVAVSGLTSVLAIAAGGS-HVLALRSDGDVWAWGY-NALGQ--LGDGTSGDKLTPVRVPG 565

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
            A +   AAG    +++   G V+TWG              G  G  Q+ S       P 
Sbjct: 566 LAPIQSVAAGTYFSMALANDGTVWTWG-------EGFEGQLGDGGGVQRLS-------PV 611

Query: 163 EQAPPSDKR------AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
                SD R      A    V+   T  A  ++     GD  +      V +     IT 
Sbjct: 612 AVKGLSDIRNISVGSAHALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAPVQVRNLTGITA 671

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           V+ G  H+L L   G V  WG  G GQLG G+    V  P +IP L              
Sbjct: 672 VSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRV-LPSVIPGL-------------- 716

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                       S ++ +  G  H   +     L  +G+  +GQ G G+     RP    
Sbjct: 717 ------------SGIQALHPGHLHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQVR 764

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
            +   +VE++AAG  H + +  +G V  +G N  GQLG G              +     
Sbjct: 765 GIG--RVERLAAGRAHALLVRADGSVVAWGANASGQLGDG----GTTHGARAVTVRGVSC 818

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           A+ V+ G +HS VL  DG V +WG N+ GQLG G +  R  P  V
Sbjct: 819 ARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRV 863



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 119/332 (35%), Gaps = 64/332 (19%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G   +LA    G +  WG+    G   L  G       P P+     VV  AAG  H V+
Sbjct: 1180 GAWHSLALRLDGTVWAWGA---NGFGQLGDGTTTARAVPVPVQGLRDVVAIAAGGYHSVA 1236

Query: 119  VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
            V   G V+TWG+            FG  G    D T +  ALP +      K  G + V 
Sbjct: 1237 VRSDGTVWTWGYNT----------FGQLG----DGTSESRALPVQ----VHKLEGVQAVT 1278

Query: 179  RRKTSSAREESENPASG----------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
                 S    ++   SG          D   T     V L     +T+V AG  HT+ L 
Sbjct: 1279 GGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDVDGLTEVRAGAAHTVALG 1338

Query: 229  DMGQVWGWGYGGEGQLG---LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
              G VW WG    GQLG    G R+++VP P                             
Sbjct: 1339 KDGTVWTWGDNAHGQLGDGVTGPRMRLVPKP----------------------------V 1370

Query: 286  AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
            +G      I  G  HS          T+G   +GQ G G    +  P     L  ++V  
Sbjct: 1371 SGLPAATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLSGLKV-- 1428

Query: 346  IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
            IA G   ++ ++ EG +  +G +  G LG GV
Sbjct: 1429 IAGGADTSLAMTQEGVLMSWGSSLHGTLGLGV 1460


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 160/388 (41%), Gaps = 48/388 (12%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           GG   ++A    G ++TWG  +  GQ  L  G + +   P  +    +V   A G  H V
Sbjct: 65  GGSFHSIALKSDGTVLTWGQ-NMHGQ--LGDGTNTDRKIPVQVKDLNNVTAIAGGAWHSV 121

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
           ++T  G V+TWG       +      G   +  ++   + + L    A  S K      +
Sbjct: 122 ALTSDGTVWTWG-------SNWAGQLGDGTTKSRNKPVQVNNLKNITAIAS-KGLHNLAL 173

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
           K   T      +     GD   T     V       I  +A GG H+L     G +W WG
Sbjct: 174 KSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTIISIAGGGYHSLAQKADGTIWTWG 233

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
               GQLG G+      T   IP L +                      G   V  I CG
Sbjct: 234 LNQYGQLGDGT-----ITNRTIPVLVN----------------------GIKDVSMIRCG 266

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           G HS V+ + G +  +G+  +GQ G  ST+++  P     L +I    I  G  H++ + 
Sbjct: 267 GDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTPVPMGDLKNIMT--IDGGGDHSLILK 324

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARHSAVLTEDGQ 415
            +G V+ +G N+ GQLG G   +        TPI  S  + V  ++ G +HS  L  DG 
Sbjct: 325 SDGTVWTWGNNENGQLGDGTTMSR------ATPIQASTLSNVTAIASGEQHSIALKSDGT 378

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           + +WG N+ GQLG G   +R+ P LV I
Sbjct: 379 IWAWGSNRNGQLGDGSISNRSTPVLVKI 406



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 112/253 (44%), Gaps = 31/253 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTPHLIPCLEHAASGKD 270
           I +V+ G  H++ L   G V  WG    GQLG G+       V    L      A     
Sbjct: 60  ILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLNNVTAIAGGAWH 119

Query: 271 RPLLVRQGSV-----NSSGKAGRSYVKE---------------IACGGRHSAVVTDAGAL 310
              L   G+V     N +G+ G    K                IA  G H+  +   G +
Sbjct: 120 SVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLKNITAIASKGLHNLALKSDGTV 179

Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            T+G  +YGQ G G+T D+  P    SL  I    IA G +H++    +G ++ +G NQ+
Sbjct: 180 WTWGRNIYGQLGDGTTTDRNTPVQTRSLNTI--ISIAGGGYHSLAQKADGTIWTWGLNQY 237

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           GQLG G      +P L+       K   ++ CG  HS VL  +G +  WG+N++GQLG  
Sbjct: 238 GQLGDGTITNRTIPVLVN----GIKDVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDR 293

Query: 431 DSIDRNIPSLVPI 443
            + +R+ P  VP+
Sbjct: 294 STDNRSTP--VPM 304



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 6/150 (4%)

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           S + +++ G  HS  +   G +LT+G  ++GQ G G+  D+  P     L +  V  IA 
Sbjct: 58  STILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLNN--VTAIAG 115

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G WH+V ++ +G V+ +G N  GQLG G  ++ N P      +   K    ++    H+ 
Sbjct: 116 GAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKP----VQVNNLKNITAIASKGLHNL 171

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
            L  DG V +WG N YGQLG G + DRN P
Sbjct: 172 ALKSDGTVWTWGRNIYGQLGDGTTTDRNTP 201



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
           PI  S   +V S G+ HS  L  DG VL+WG N +GQLG G + DR IP  V     +  
Sbjct: 54  PIFASTILQV-SGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLNNVTA 112

Query: 450 NIACGWWHTLLLAE 463
            IA G WH++ L  
Sbjct: 113 -IAGGAWHSVALTS 125


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 106/211 (50%), Gaps = 29/211 (13%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+     P LI  L+        
Sbjct: 514 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALK-------- 564

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                              +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 565 ----------------TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 608

Query: 332 PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+P+ +E 
Sbjct: 609 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 668

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
             L  +    + CGA+ S  LT+ G V +WG
Sbjct: 669 --LNGQGVCQIECGAQFSLALTKSGVVWTWG 697



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 129/268 (48%), Gaps = 31/268 (11%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + S  L  LN    + +VA G +    ++  G+V+  G    G+LGLG     VP P  I
Sbjct: 451 SFSETLSALN----VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQI 506

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             L           +V++ +V+S              GGRH+  +T  G + ++G G  G
Sbjct: 507 TALS--------SYVVKKVAVHS--------------GGRHATALTVDGKVFSWGEGDDG 544

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GH S  +  +P    +L   ++  IA G  H+  ++  G +Y +G  ++G+LG G + 
Sbjct: 545 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT 604

Query: 380 AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
            +  PK+++  +L   R   V+CG+R   +  LT++G V SWG   +G+LG G S   NI
Sbjct: 605 TQLKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI 662

Query: 438 PSLVP-IHGFLPRNIACGWWHTLLLAET 464
           P  +  ++G     I CG   +L L ++
Sbjct: 663 PQNIERLNGQGVCQIECGAQFSLALTKS 690



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
           N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 406 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 456

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
           S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 457 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 496

Query: 327 NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 497 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 556

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 557 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 614

Query: 444 -HGFLPRNIACGWWHTLLLAETTQ 466
             G     +ACG      LA T +
Sbjct: 615 LLGHRVIQVACGSRDAQTLALTDE 638



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 27/166 (16%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L+      +I  +A G  H+  L+  G+++ WG G  G+LG G     +    +   L
Sbjct: 557 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 616

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR--HSAVVTDAGALLTFGWGLYGQ 320
            H                          V ++ACG R   +  +TD G + ++G G +G+
Sbjct: 617 GHR-------------------------VIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 651

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            G G +     P     L    V QI  G   ++ ++  G V+ +G
Sbjct: 652 LGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 697



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 103/271 (38%), Gaps = 49/271 (18%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---GW 113
           GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G 
Sbjct: 466 GGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSGG 523

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
            H  ++T  G+V++WG            D G  G F + +  K   +   +       A 
Sbjct: 524 RHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIAC 573

Query: 174 EEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTL 225
                   TSS         E      GD    L P +V +  G ++ +VA G R   TL
Sbjct: 574 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 633

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G 
Sbjct: 634 ALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG- 673

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
                V +I CG + S  +T +G + T+G G
Sbjct: 674 -----VCQIECGAQFSLALTKSGVVWTWGKG 699



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)

Query: 41  PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
           PIP ++    S+   K     G   A A +  GK+ +WG  DD G+    S  + + P  
Sbjct: 501 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 559

Query: 98  FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
                   +   A G +H  ++T +GE+YTWG  E
Sbjct: 560 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 594


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 126/273 (46%), Gaps = 36/273 (13%)

Query: 196 DEFFTLSP--CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           DE   + P  C   +N  V+   V  G RHT  + D G V+  G    GQLG        
Sbjct: 18  DEEVVIEPRRCDFFINKNVR--DVGCGNRHTGFVLDDGTVYTCGCNDLGQLG-------- 67

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
                     H  S K +P  V        G      +  ++CG  H+  + D G + ++
Sbjct: 68  ----------HDKSRK-KPEQV--------GALDAQIIVAVSCGEAHTLALNDKGQVFSW 108

Query: 314 GWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G   +GQ G     D +R P    SL DIQ+ Q+A G  H++ +S E  +Y +G NQ+GQ
Sbjct: 109 GHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQ 168

Query: 373 LGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           LG G ++  E+ P+ +++  L       ++ G  HS  LT  G +  WG NK+GQLGL D
Sbjct: 169 LGLGSEKRKESAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLND 226

Query: 432 SIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
             DR+ P+L+  +       I CG  HT  L +
Sbjct: 227 ETDRSDPALLKSLRSQKIIYICCGEDHTAALTK 259



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 107/234 (45%), Gaps = 33/234 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS    ++ WG    GQLGLGS  +    P       H  S    
Sbjct: 137 IQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAP------RHIKSLSGI 190

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
           P                     IA GG HS  +T +GA+  FGWG   +GQ G     D+
Sbjct: 191 PF------------------AHIAAGGGHSFALTISGAI--FGWGRNKFGQLGLNDETDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 SDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFE 290

Query: 389 TPILESKRAKVVSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H+ A +   G++ S+G    GQLG+G + ++  PS+V
Sbjct: 291 ---LMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 147/363 (40%), Gaps = 59/363 (16%)

Query: 42  IPARLCGGDSWKDVCGGGCG-----FALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
           I  R C     K+V   GCG     F L   + G + T G  +D GQ  L   K  + PE
Sbjct: 23  IEPRRCDFFINKNVRDVGCGNRHTGFVL---DDGTVYTCG-CNDLGQ--LGHDKSRKKPE 76

Query: 97  PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE--------CVPSAKVTRDFGSAGS 148
                    +V  + G AH +++ + G+V++WG                +V R+  S   
Sbjct: 77  QVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSD 136

Query: 149 FQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV 206
            Q  + + G   +L   +          +  +    S  R+ES            +P  +
Sbjct: 137 IQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKES------------APRHI 184

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
               G+    +AAGG H+  L+  G ++GWG    GQLGL                    
Sbjct: 185 KSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE----------------- 227

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
           + +  P L++  S+ S        +  I CG  H+A +T  G + TFG G YGQ GH S 
Sbjct: 228 TDRSDPALLK--SLRSQK------IIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSA 279

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
           + ++ P     LM   V QIA G  HT+  +   GR+Y FG    GQLG G    +  P 
Sbjct: 280 SHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPS 339

Query: 386 LLE 388
           +++
Sbjct: 340 MVK 342



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  + P      ++  V  +  G  HT  +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   D++   P+  +   L+++    VSCG  H+  L + GQV SWG   +GQ+
Sbjct: 61  NDLGQLGH--DKSRKKPE--QVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116

Query: 428 GLGDSID-----RNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           G+  + D     RNI SL  I       +ACG  H+L L++ + I
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIV---QVACGHHHSLALSKESNI 158


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 118/254 (46%), Gaps = 32/254 (12%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L              
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK---------- 129

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYA 335
                         + +++CG  HS  ++    + ++G   +GQ G G     Q  P   
Sbjct: 130 --------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---- 391
            SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NVP     P+    
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS---GRNVPVQSNKPLSVGA 232

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
           L++     +SCG  H+AVLT+DG+V ++G N+ GQLG   + ++  P LV     L   I
Sbjct: 233 LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQI 292

Query: 452 ACGWWHTLLLAETT 465
            CG +HTL    TT
Sbjct: 293 DCGSYHTLAYVHTT 306



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 36/222 (16%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           ++TLN  +KI +V+ G  H+L LS   QV+ WG    GQLGLG       +P  +  LE 
Sbjct: 122 IMTLN-DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEG 180

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCG 322
                  PL                   ++A GG HS  ++  G   +FGWG    GQ  
Sbjct: 181 I------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNSAGQLA 214

Query: 323 HGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
               N  +   +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N+ GQLG     
Sbjct: 215 LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTP 274

Query: 380 AENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
            +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 275 EKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 7/164 (4%)

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
           G D   L R+ +  S G    + + + A G RHS ++     +L+ G    GQ G     
Sbjct: 6   GADSRELQRRRTAGSPG----AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQ 61

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKL 386
               P    +L  + V+ ++ G  H++ +  +GRV+ +G    GQLG G   +    PK 
Sbjct: 62  RGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKK 121

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           + T  L   +   VSCG  HS  L++D QV SWG N +GQLGLG
Sbjct: 122 IMT--LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 163



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG    Q   +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLIVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      ++ ++      ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|145495055|ref|XP_001433521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400639|emb|CAK66124.1| unnamed protein product [Paramecium tetraurelia]
          Length = 447

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 32/217 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           +I  + A   +T+ + + G+++ WG    G+LG  +  K +  P  I  L          
Sbjct: 184 RIVDIYAQHNYTMAIDEEGRLFSWGSNEFGRLGQNAFAKCMKLPSPITSL---------- 233

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                         G   + ++A G  H   +   G L ++G GL GQ GHG++ND  +P
Sbjct: 234 --------------GNLKIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGTSNDCSKP 279

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
           +  SSL  I+   +A G  H++ +   G VYVFG  QFGQLG G  + ++ P++L+    
Sbjct: 280 NQISSLSSIR--DVACGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDAPQMLQI--- 334

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
                ++++CG  HSAVLT++G +  +G N+  QLGL
Sbjct: 335 ---HGEMIACGRHHSAVLTKNGALFMFGNNESSQLGL 368



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 35/258 (13%)

Query: 211 GVKITKVAAGGRHTLILSDM---GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
           G ++ K+A G  H++ L ++    +++ WG     QLG  +  + V  PH +        
Sbjct: 126 GWQLQKIAVGLDHSVALIEVEEENKIFVWGSNAYQQLGFDASEQFVAIPHQL-------D 178

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
             + P +V                 +I     ++  + + G L ++G   +G+ G  +  
Sbjct: 179 SDNLPRIV-----------------DIYAQHNYTMAIDEEGRLFSWGSNEFGRLGQNAFA 221

Query: 328 DQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
             ++ PS  +SL ++++ ++A G +H + I  +G +Y +G    GQLG G     + P  
Sbjct: 222 KCMKLPSPITSLGNLKIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGTSNDCSKPNQ 281

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
           + +  L S R   V+CG  HS  L  +G V  +G  ++GQLGLGD   ++ P ++ IHG 
Sbjct: 282 ISS--LSSIRD--VACGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDAPQMLQIHGE 337

Query: 447 LPRNIACGWWHTLLLAET 464
           +   IACG  H+ +L + 
Sbjct: 338 M---IACGRHHSAVLTKN 352



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 149/378 (39%), Gaps = 92/378 (24%)

Query: 22  VYMWGYLPGTSPEKSPILSPIPARLCGGD---SWKDVCGGGCGFALATSESGKLITWGSA 78
           V+MWG   G    K   L  I       +   +W D    GCG    +++ GKL    S 
Sbjct: 57  VFMWG--QGIQIPKQLELQDIEQIAASKEHWFAWSDTQVFGCG----SNKQGKLGMNNSV 110

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGE---VYTWGW 130
           +              TP  F + +EAS     + K A G  H V++ E  E   ++ WG 
Sbjct: 111 N--------------TPTLFDIFSEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWG- 155

Query: 131 RECVPSAKVTRDFGSAGSFQK---DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
                          + ++Q+   D++ +  A+P +    +  R  +   +   T +  E
Sbjct: 156 ---------------SNAYQQLGFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDE 200

Query: 188 ESENPASGDEFF------TLSPCLVTLNP-----GVKITKVAAGGRHTLILSDMGQVWGW 236
           E    + G   F        + C+   +P      +KI K+A G  H L +   G ++ W
Sbjct: 201 EGRLFSWGSNEFGRLGQNAFAKCMKLPSPITSLGNLKIAKLALGTFHVLAIDTQGNLYSW 260

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G +GQLG G+       P+ I  L                          S ++++AC
Sbjct: 261 GRGLQGQLGHGTS-NDCSKPNQISSL--------------------------SSIRDVAC 293

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G  HS  + + G++  FG G +GQ G G    Q  P     ++ I  E IA G  H+  +
Sbjct: 294 GEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDAP----QMLQIHGEMIACGRHHSAVL 349

Query: 357 SVEGRVYVFGGNQFGQLG 374
           +  G +++FG N+  QLG
Sbjct: 350 TKNGALFMFGNNESSQLG 367


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 124/271 (45%), Gaps = 32/271 (11%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   T + +R P    SL DIQ+ QIA G +H++ +S    V+ +G N+ GQLG
Sbjct: 111 DTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170

Query: 375 TGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
            G + + ++ P+L+++  L       V+ G  HS VLT  G +  WG NK+GQLGL D  
Sbjct: 171 LGFELKRQSSPQLIKS--LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228

Query: 434 DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           DR +P+L+  +       I CG  HT  L +
Sbjct: 229 DRFVPNLLKSLRSQKIVYICCGEDHTAALTK 259



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 157/395 (39%), Gaps = 93/395 (23%)

Query: 53  KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
           K V   GCG    +   + G + T G  +D GQ  L   K  + PE        ++V  +
Sbjct: 34  KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
            G AH +++ + G+VY WG                        T  Q  LP         
Sbjct: 91  CGEAHTLALNDKGQVYAWGL----------------------DTDGQLGLP--------- 119

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
                                   G E +   P  +     ++I ++A G  H+L LS  
Sbjct: 120 ------------------------GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKG 155

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            +V+ WG    GQLGLG  +K   +P LI  L                        G  +
Sbjct: 156 SEVFSWGQNKHGQLGLGFELKRQSSPQLIKSL-----------------------LGIPF 192

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
             ++A GG HS V+T +GA+  FGWG   +GQ G    ND+  P+   SL   ++  I  
Sbjct: 193 T-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICC 249

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH- 406
           G  HT  ++ EG V+ FG   +GQLG      E  P K+ E   L       ++CG +H 
Sbjct: 250 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQIACGRQHT 306

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           SA +   G++ S+G    GQLG G + +R  P  V
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V+ +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  I       IACG++H+L L++ +++
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQ---IVQIACGYYHSLALSKGSEV 158


>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
          Length = 918

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 134/285 (47%), Gaps = 17/285 (5%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           +GD      P LV    G  +  VA    HT+   D G  + WG    G+LGL      +
Sbjct: 47  TGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHG--LSI 104

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS----YVKEIACGGRHSAVV----T 305
           P+   +     A   +  PL         + +   S    ++ ++ACG  HSA +     
Sbjct: 105 PSSAGLGVFSPATGARPEPLA--SACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQ 162

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
           D  +L T G GL G+ GHG   D+  P+   +L ++ +  IA G  HT C++  G +Y +
Sbjct: 163 DRTSLFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTW 222

Query: 366 GGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW-NK 423
           GG  FG+LG G  + ++ +PK +  P L +K    V+ G++HSA +T DG++ +WG   +
Sbjct: 223 GGAAFGKLGLGSTRGSQLLPKHVSGP-LRNKAVVSVALGSQHSACVTTDGELYTWGQGRR 281

Query: 424 YGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            G    G+S D  +P  V  + G    ++ CG  HT  + E   +
Sbjct: 282 LGHEVQGES-DEILPRRVEALLGLFVIHVVCGDAHTACIVENGNV 325



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 119/292 (40%), Gaps = 65/292 (22%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP LV     +   +V+AGG    +++  G+++ WG   EGQLG G R +    P L+  
Sbjct: 3   SPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDR-RDASVPRLVKA 61

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           L     GK                     VK +AC   H+    D G+   +G  L G+ 
Sbjct: 62  LH----GK--------------------VVKAVACSQEHTVCCLDDGSAYAWGCALNGRL 97

Query: 322 G-HG------------------------STNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G HG                        S      P    SL    +  +A G +H+  +
Sbjct: 98  GLHGLSIPSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFL 157

Query: 357 SV--EGRVYVF--GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
            +  + R  +F  G    G+LG G ++  ++P  +    LE+     ++CGA H+A +T 
Sbjct: 158 GIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTAVHA--LENVNITAIACGAHHTACVTS 215

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RN-----IACGWWHT 458
            G + +WG   +G+LGLG +       L+P H   P RN     +A G  H+
Sbjct: 216 AGTLYTWGGAAFGKLGLGSTRGSQ---LLPKHVSGPLRNKAVVSVALGSQHS 264



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 92/225 (40%), Gaps = 32/225 (14%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GDE     P  V     V IT +A G  HT  ++  G ++ WG    G+LGLGS      
Sbjct: 181 GDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGS----TR 236

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
              L+P  +H                  SG      V  +A G +HSA VT  G L T  
Sbjct: 237 GSQLLP--KHV-----------------SGPLRNKAVVSVALGSQHSACVTTDGELYT-- 275

Query: 315 WGLYGQCGH--GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           WG   + GH     +D++ P    +L+ + V  +  G  HT CI   G V+ +G ++   
Sbjct: 276 WGQGRRLGHEVQGESDEILPRRVEALLGLFVIHVVCGDAHTACIVENGNVWAWGTSRI-- 333

Query: 373 LGTGVDQA-ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           LG G  +   N P  L    L  K    +SC +  +    +  +V
Sbjct: 334 LGHGDPEVPPNRPACLRA--LNGKGVVQLSCASTFTVAFCDPQRV 376



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-P 442
           P+L++   L++  ++ VS G    AV+   G++  WG N  GQLG GD  D ++P LV  
Sbjct: 4   PRLVDA--LKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKA 61

Query: 443 IHGFLPRNIACGWWHTL 459
           +HG + + +AC   HT+
Sbjct: 62  LHGKVVKAVACSQEHTV 78


>gi|350402535|ref|XP_003486520.1| PREDICTED: hypothetical protein LOC100745121 [Bombus impatiens]
          Length = 1865

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 30/209 (14%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            V++  V+ G  HTL +++ G V+ WG    GQLGLG ++    TP LI  L         
Sbjct: 871  VEVLSVSCGHCHTLAVTNNG-VYAWGSSQFGQLGLG-KVLQCSTPELITSL--------- 919

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                            +  + +   G  HS  +T  G + T+GWG++GQ GHG+T+ ++ 
Sbjct: 920  ---------------AQEVIIDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKMT 964

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+  +SL+   +  I AG  HT+ +S EG VY FG N FGQLG G +   +VP      +
Sbjct: 965  PTLVTSLLGTVIRYITAGHAHTLALSTEGIVYAFGCNIFGQLGVGSNVKSSVP----MKV 1020

Query: 392  LESKRAKVVSCGARHSAVLTEDGQVLSWG 420
              S+R  +++ G  H+  ++   ++  WG
Sbjct: 1021 SLSERITLITTGYFHNLAVSYTNKLYIWG 1049



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 35/255 (13%)

Query: 217  VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
            + AG  H  ++ + G V+ WG    G LG+G                        P ++R
Sbjct: 822  LCAGFSHVALIRN-GNVYTWGSSVHGCLGIG------------------------PSVLR 856

Query: 277  QGSVNSSGK--AGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRP 332
             GS  +          V  ++CG  H+  VT+ G    + WG   +GQ G G       P
Sbjct: 857  YGSPQAITFFWLMEVEVLSVSCGHCHTLAVTNNGV---YAWGSSQFGQLGLGKVLQCSTP 913

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               +SL    +    AG +H+V ++ +GRV+ +G    GQLG G    +  P L+ +  L
Sbjct: 914  ELITSLAQEVIIDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKMTPTLVTS--L 971

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA 452
                 + ++ G  H+  L+ +G V ++G N +GQLG+G ++  ++P  V +   +   I 
Sbjct: 972  LGTVIRYITAGHAHTLALSTEGIVYAFGCNIFGQLGVGSNVKSSVPMKVSLSERITL-IT 1030

Query: 453  CGWWHTLLLAETTQI 467
             G++H L ++ T ++
Sbjct: 1031 TGYFHNLAVSYTNKL 1045



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 7/181 (3%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS---LMDIQ 342
           +G  + +   C G     +   G + T+G  ++G  G G +  +     A +   LM+++
Sbjct: 813 SGADFKRRPLCAGFSHVALIRNGNVYTWGSSVHGCLGIGPSVLRYGSPQAITFFWLMEVE 872

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
           V  ++ G  HT+ ++  G VY +G +QFGQLG G     + P+L+ +   E     V   
Sbjct: 873 VLSVSCGHCHTLAVTNNG-VYAWGSSQFGQLGLGKVLQCSTPELITSLAQEVIIDAVA-- 929

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLL 461
           G  HS  LT DG+V +WGW  +GQLG G++  +  P+LV  + G + R I  G  HTL L
Sbjct: 930 GQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGTVIRYITAGHAHTLAL 989

Query: 462 A 462
           +
Sbjct: 990 S 990



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 27/166 (16%)

Query: 202  SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
            +P L+T      I    AG  H++ L+  G+V+ WG+G  GQLG G+  K + TP L+  
Sbjct: 912  TPELITSLAQEVIIDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKM-TPTLVTS 970

Query: 262  LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
            L               G+V          ++ I  G  H+  ++  G +  FG  ++GQ 
Sbjct: 971  L--------------LGTV----------IRYITAGHAHTLALSTEGIVYAFGCNIFGQL 1006

Query: 322  GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
            G GS      P   S  +  ++  I  G +H + +S   ++Y++G 
Sbjct: 1007 GVGSNVKSSVPMKVS--LSERITLITTGYFHNLAVSYTNKLYIWGA 1050



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 29/224 (12%)

Query: 58   GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
             G    LA S  G +  +G  +  GQ  L  G + ++  P  +     +     G+ H +
Sbjct: 981  AGHAHTLALSTEGIVYAFG-CNIFGQ--LGVGSNVKSSVPMKVSLSERITLITTGYFHNL 1037

Query: 118  SVTEAGEVYTWG-----WRECVPSAKVTR--------DFGSAGSFQKDSTGKQSALPTEQ 164
            +V+   ++Y WG      R    + K TR         F +   F+K +         E+
Sbjct: 1038 AVSYTNKLYIWGASPQVLRLQAQTQKRTRILEQRDLKQFENIDEFEKVTDSANMNDTNEE 1097

Query: 165  APPSD--------KRAGEEVVKRRKTSSAREESENPASGDEFFT-LSPCLV--TLNPGVK 213
               ++        K  G     R+K  ++  +S N  S +E  T L P +V  +L  G  
Sbjct: 1098 VLENNAQNRNVQSKACGISTESRKKLDNSCLKSVNVGSLEEAQTHLKPTIVDTSLVKG-D 1156

Query: 214  ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
            I +++AG  H  +++  G ++ WG   +GQ+G GSR ++ +PTP
Sbjct: 1157 IIRISAGCHHNALITKDGSLYMWGRNLDGQIGNGSRREVPIPTP 1200



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 142/376 (37%), Gaps = 50/376 (13%)

Query: 54   DVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
            +V    CG    LA + +G +  WGS+   GQ  L       TPE      +  ++ A A
Sbjct: 872  EVLSVSCGHCHTLAVTNNG-VYAWGSSQ-FGQLGLGKVLQCSTPELITSLAQEVIIDAVA 929

Query: 112  GWAHCVSVTEAGEVYTWGW------------RECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
            G  H V++T  G V+TWGW            ++  P+  VT   G+   +         A
Sbjct: 930  GQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKMTPTL-VTSLLGTVIRYITAGHAHTLA 988

Query: 160  LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
            L TE    +    G  +  +    S  + S             P  V+L+   +IT +  
Sbjct: 989  LSTEGIVYA---FGCNIFGQLGVGSNVKSS------------VPMKVSLSE--RITLITT 1031

Query: 220  GGRHTLILSDMGQVWGWGYGGEG---QLGLGSRIKMVPTPHL--IPCLEHAASGKDRPLL 274
            G  H L +S   +++ WG   +    Q     R +++    L     ++      D   +
Sbjct: 1032 GYFHNLAVSYTNKLYIWGASPQVLRLQAQTQKRTRILEQRDLKQFENIDEFEKVTDSANM 1091

Query: 275  VRQGSVNSSGKAGRSYVKEIACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                       A    V+  ACG    S    D   L +   G   +         L+P+
Sbjct: 1092 NDTNEEVLENNAQNRNVQSKACGISTESRKKLDNSCLKSVNVGSLEE-----AQTHLKPT 1146

Query: 334  YA-SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               +SL+   + +I+AG  H   I+ +G +Y++G N  GQ+G G  +   +P    TP+ 
Sbjct: 1147 IVDTSLVKGDIIRISAGCHHNALITKDGSLYMWGRNLDGQIGNGSRREVPIP----TPLC 1202

Query: 393  ESKRAKVVSCGARHSA 408
             +  +       RH+A
Sbjct: 1203 YNPASIFAQVPPRHNA 1218


>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
 gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
          Length = 453

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 40/257 (15%)

Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
            F ++ P LVT     KI +VA G RHTL+L++  +V+ +G G E QLG+GS        
Sbjct: 136 NFKSIIPSLVTPLKDFKIKQVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGST------- 188

Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
                       +++PL V   S++  G      + ++ CG  HS V+T  G + T+G+ 
Sbjct: 189 ------------ENQPLPVEIESLSKLGN-----IIKLECGWGHSLVLTSDGDIFTWGFT 231

Query: 317 LYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
              Q GHG + + +  P    +  + + + I  G    + I+ +GRV  +G  +FGQLG 
Sbjct: 232 QDSQTGHGFSEEPIHIPKMIKT--NYKFKNIFTGSDFNLAITNDGRVCSWGSGEFGQLGH 289

Query: 376 GVDQAENVPKLLE-------TPILESKRA---KVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G  +    PKL++       T ++ + R    K+V+CG  H+ ++  DG++L+ GWN  G
Sbjct: 290 GDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFSHALIIDNDGKLLTLGWNGNG 349

Query: 426 QLGLGDSIDRNIPSLVP 442
           QLG G   D +   LVP
Sbjct: 350 QLGSGVKGDNH---LVP 363



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 100/186 (53%), Gaps = 19/186 (10%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI-QVEQIAAG 349
           +K++A G RH+ V+T+   + +FG G   Q G GST +Q  P    SL  +  + ++  G
Sbjct: 153 IKQVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIKLECG 212

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGV-DQAENVPKLLETPILESKRAKVVSCGARHSA 408
             H++ ++ +G ++ +G  Q  Q G G  ++  ++PK+++T    + + K +  G+  + 
Sbjct: 213 WGHSLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKT----NYKFKNIFTGSDFNL 268

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-----IHGFLP--------RNIACGW 455
            +T DG+V SWG  ++GQLG GD+ +   P L+      +H  L         + +ACG+
Sbjct: 269 AITNDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGF 328

Query: 456 WHTLLL 461
            H L++
Sbjct: 329 SHALII 334



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 71/293 (24%)

Query: 96  EPFPLPTEA-----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK--------VTRD 142
           +P P+  E+     +++K   GW H + +T  G+++TWG+ +   +          + + 
Sbjct: 191 QPLPVEIESLSKLGNIIKLECGWGHSLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKM 250

Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKR-----AGEEVVKRRKTSSAREESENPASGDE 197
             +   F+   TG    L    A  +D R     +GE             +++N  +   
Sbjct: 251 IKTNYKFKNIFTGSDFNL----AITNDGRVCSWGSGEF------GQLGHGDTKNVEAPKL 300

Query: 198 FFTLSPC----LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
             ++ P     L+  N   +   VA G  H LI+ + G++   G+ G GQLG G +    
Sbjct: 301 IQSIQPLVHTNLINTNRIYEYKMVACGFSHALIIDNDGKLLTLGWNGNGQLGSGVK---- 356

Query: 254 PTPHLIPC-LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
              HL+P  LE    G+                     V +++ G  HSA +T++G L  
Sbjct: 357 GDNHLVPTKLEFDFDGEK--------------------VVKVSAGRNHSACITESGKLYI 396

Query: 313 FGWGLYGQCGHG-STNDQLRPSYASSLMDI----------QVEQIAAGLWHTV 354
           +G G  G+ G+G S  DQL P     L+DI          +V  I+ G  HT+
Sbjct: 397 WGNGNKGKLGNGKSVGDQLTP---LELIDIDENNTDPSNQKVLNISCGFDHTI 446



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 10/135 (7%)

Query: 340 DIQVEQIAAGLWHTVCISVE-GRVYVFGGNQFGQLGTGVDQAENVPKLLETPI--LESKR 396
           +++ + I  G +HT+ +S E  ++Y  G   F  +   V++  N   ++ + +  L+  +
Sbjct: 94  NLECKDIVCGHYHTMLVSKEKDQLYSCGWTSFVAMDR-VNKETNFKSIIPSLVTPLKDFK 152

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP----SLVPIHGFLPRNIA 452
            K V+ G RH+ VLTED +V S+G     QLG+G + ++ +P    SL  +   +   + 
Sbjct: 153 IKQVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIK--LE 210

Query: 453 CGWWHTLLLAETTQI 467
           CGW H+L+L     I
Sbjct: 211 CGWGHSLVLTSDGDI 225



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 37/77 (48%), Gaps = 11/77 (14%)

Query: 60  CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE-----TPEPFPLPTEASVVKAAAG 112
           CGF  AL     GKL+T G     G   L SG  G+     T   F    E  VVK +AG
Sbjct: 326 CGFSHALIIDNDGKLLTLGW---NGNGQLGSGVKGDNHLVPTKLEFDFDGEK-VVKVSAG 381

Query: 113 WAHCVSVTEAGEVYTWG 129
             H   +TE+G++Y WG
Sbjct: 382 RNHSACITESGKLYIWG 398


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 123/257 (47%), Gaps = 40/257 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMV 253
           GD     SP  V+    + + +VA G RH+L+L    QV+G+G G  GQLG+ + R+K V
Sbjct: 139 GDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSV 198

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
             P ++                       SG  G   V   A  G HSA V+  G + T+
Sbjct: 199 NVPKVV-----------------------SGFEGVEIVG-TAANGDHSAAVSVDGHVYTW 234

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G G  G        D   P   +S ++    ++A G  H + +S EG VY+ GGN  G L
Sbjct: 235 GRGFKG------FEDAHVPQCLNSSLNFT--KVALGWNHALAMSGEGEVYMLGGNHLGVL 286

Query: 374 GT--GVDQAENVPKLLE-----TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
                +  A++ P L E      P L+  +   ++ GA HS ++TE G++ +WGW ++GQ
Sbjct: 287 SDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQ 346

Query: 427 LGLGDSIDRNIPSLVPI 443
           LGLGD+ D+  P  V +
Sbjct: 347 LGLGDTRDQTSPVTVSL 363



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 114/269 (42%), Gaps = 38/269 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE F   P L+       I+ +A GG H + L+  G+   WG G  GQLG G  +     
Sbjct: 38  DEHF---PQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLY 94

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
           P  +  L+                          ++  ++ G  HS  V+D G + T G 
Sbjct: 95  PKAVTSLD------------------------GYFITHVSAGWSHSGFVSDTGFVFTCGD 130

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           G +GQ GHG       P   S  +D+ V Q+A G+ H++ +    +VY FG  + GQLG 
Sbjct: 131 GSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGV 190

Query: 376 GVDQAE--NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
             D+ +  NVPK++     E       +    HSA ++ DG V +WG       G     
Sbjct: 191 SNDRVKSVNVPKVVSG--FEGVEIVGTAANGDHSAAVSVDGHVYTWG------RGFKGFE 242

Query: 434 DRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           D ++P  +       + +A GW H L ++
Sbjct: 243 DAHVPQCLNSSLNFTK-VALGWNHALAMS 270



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 34/215 (15%)

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           +VW WG G EGQLG     K++   H              P L+ Q S++S        +
Sbjct: 19  RVWSWGAGTEGQLG----TKILQDEHF-------------PQLLHQFSLSS--------I 53

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGL 350
             +ACGG H   +T AG  L++G G  GQ GHG   ++ L P   +SL    +  ++AG 
Sbjct: 54  SSLACGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGW 113

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            H+  +S  G V+  G   FGQLG G D A +   +  +  ++   A+ V+CG RHS VL
Sbjct: 114 SHSGFVSDTGFVFTCGDGSFGQLGHG-DNASHCSPVKVSCFVDLHVAQ-VACGMRHSLVL 171

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDR----NIPSLV 441
            +  QV  +G  K GQLG+  S DR    N+P +V
Sbjct: 172 LKGNQVYGFGSGKRGQLGV--SNDRVKSVNVPKVV 204



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 4/108 (3%)

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           E RV+ +G    GQLGT + Q E+ P+LL    L S  +  ++CG  H   LT  G+ LS
Sbjct: 17  EQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISS--LACGGAHVIALTSAGKALS 74

Query: 419 WGWNKYGQLGLGDSIDRNI--PSLVPIHGFLPRNIACGWWHTLLLAET 464
           WG    GQLG G+ +   +   ++  + G+   +++ GW H+  +++T
Sbjct: 75  WGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDT 122



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 152/406 (37%), Gaps = 104/406 (25%)

Query: 3   MNGSKREENEKMEECKETVVYMWG---------------YLPGTSPEKSPILSPIPARLC 47
           M    + ENE   +  E  V+ WG               + P    + S  LS I +  C
Sbjct: 1   MEEPNKTENEDDRDESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFS--LSSISSLAC 58

Query: 48  GGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEAS 105
           GG              +A + +GK ++WG  +        SG+  HGE       P   +
Sbjct: 59  GG-----------AHVIALTSAGKALSWGRGN--------SGQLGHGEVVSNTLYPKAVT 99

Query: 106 ------VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
                 +   +AGW+H   V++ G V+T G                 GSF +   G  ++
Sbjct: 100 SLDGYFITHVSAGWSHSGFVSDTGFVFTCG----------------DGSFGQLGHGDNAS 143

Query: 160 L--PTEQAPPSDKRAGEEVVKRRKT-----------SSAREESENPASGDEFFTLS-PCL 205
              P + +   D    +     R +             + +  +   S D   +++ P +
Sbjct: 144 HCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKV 203

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG-----------------QLGLG- 247
           V+   GV+I   AA G H+  +S  G V+ WG G +G                 ++ LG 
Sbjct: 204 VSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKGFEDAHVPQCLNSSLNFTKVALGW 263

Query: 248 ---------SRIKMVPTPHL--IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
                      + M+   HL  +  L++    K  P L R+ ++        + + +IA 
Sbjct: 264 NHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDL-REFNLEKVPGLDGTKITDIAA 322

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
           G  HS +VT+ G + T+GWG +GQ G G T DQ  P   S   D+ 
Sbjct: 323 GAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDYDLN 368



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 10/161 (6%)

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           ++G G  GQ G     D+  P          +  +A G  H + ++  G+   +G    G
Sbjct: 22  SWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSG 81

Query: 372 QLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           QLG G V      PK + +  L+      VS G  HS  +++ G V + G   +GQLG G
Sbjct: 82  QLGHGEVVSNTLYPKAVTS--LDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHG 139

Query: 431 DSIDR----NIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           D+        +   V +H      +ACG  H+L+L +  Q+
Sbjct: 140 DNASHCSPVKVSCFVDLH---VAQVACGMRHSLVLLKGNQV 177


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 134/291 (46%), Gaps = 32/291 (10%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG---LGSRIKMVPTPH 257
             P  V      ++ ++A G  +T+ +++ GQV+  G    GQLG      R++++P   
Sbjct: 23  FMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARKRLQLIPGLD 82

Query: 258 LIPCLEHAASGKDRPLLVRQ-----------------GSVNSSGKA-------GRSYVKE 293
                +  A G    L V +                  SV+ + +        G S + +
Sbjct: 83  AF-VFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQ 141

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWH 352
           IACG  HS  +T+ G L ++G    GQ G GS T  +++P    +L  + +  IA G +H
Sbjct: 142 IACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYH 201

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           TV IS  G V+ +G N FGQLG    Q   VP  L T  L + +    +CG   S  LT 
Sbjct: 202 TVVISKSGVVFAWGRNTFGQLGLNDTQQRIVPCQLRT--LRNAKVCYAACGEEFSVFLTL 259

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLA 462
           DG V + G   YGQLG G+ ++  +P  ++ + G     I+CG  HTL L 
Sbjct: 260 DGGVFTCGAGMYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALV 310



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 27/216 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I ++A G  H++ L++ G+++ WG   EGQLG+GS       P  I  L           
Sbjct: 139 IVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVP------- 191

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                            +  IACGG H+ V++ +G +  +G   +GQ G   T  ++ P 
Sbjct: 192 -----------------IAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIVPC 234

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
              +L + +V   A G   +V ++++G V+  G   +GQLG G    E +P+  +   L 
Sbjct: 235 QLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPR--QVMELM 292

Query: 394 SKRAKVVSCGARHS-AVLTEDGQVLSWGWNKYGQLG 428
                 +SCG RH+ A++   G+V +WG    GQLG
Sbjct: 293 GSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 135/341 (39%), Gaps = 84/341 (24%)

Query: 52  WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAA 110
           +K +  G C   LA +E G+L +WG  + +GQ  L S    E TP        + +V+ A
Sbjct: 86  FKKIACGSCH-TLAVNEWGQLFSWG-CNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIA 143

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
            G  H +++T  GE+Y+WG                  S ++   G  S   TE  P    
Sbjct: 144 CGIEHSIALTNDGELYSWG------------------SNREGQLGIGSHTVTEIKP---- 181

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
                  KR  T +A                          V I  +A GG HT+++S  
Sbjct: 182 -------KRIITLAA--------------------------VPIAFIACGGYHTVVISKS 208

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G V+ WG    GQLGL           ++PC                  + +   A   Y
Sbjct: 209 GVVFAWGRNTFGQLGLND-----TQQRIVPC-----------------QLRTLRNAKVCY 246

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
               ACG   S  +T  G + T G G+YGQ GHG+  +++ P     LM   V QI+ G 
Sbjct: 247 A---ACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPRQVMELMGSTVTQISCGK 303

Query: 351 WHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            HT+  +   GRVY +G    GQLG    ++   P ++  P
Sbjct: 304 RHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTPLVVLGP 344



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 7/177 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++IACG  ++  +T+ G + + G   YGQ GH     +L+      L     ++IA G 
Sbjct: 36  VEQIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARKRLQ--LIPGLDAFVFKKIACGS 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            HT+ ++  G+++ +G N  GQLG   VD  E  P++++   L +     ++CG  HS  
Sbjct: 94  CHTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKA--LGTSVIVQIACGIEHSIA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVPIHGFLP-RNIACGWWHTLLLAET 464
           LT DG++ SWG N+ GQLG+G      I P  +     +P   IACG +HT++++++
Sbjct: 152 LTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKS 208



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 12/156 (7%)

Query: 313 FGWG--LYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           F WG  ++G+ G G   D+    P         +VEQIA G  +TV I+ +G+VY  G N
Sbjct: 2   FCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNN 61

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            +GQLG   ++A    +L+  P L++   K ++CG+ H+  + E GQ+ SWG N  GQLG
Sbjct: 62  DYGQLGH--EKARKRLQLI--PGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLG 117

Query: 429 LGDSID--RNIPSLVPIHGF-LPRNIACGWWHTLLL 461
           L +S+D     P +V   G  +   IACG  H++ L
Sbjct: 118 L-NSVDCTERTPRMVKALGTSVIVQIACGIEHSIAL 152



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           ++ +G    G+LG G  + EN+    +    ++   + ++CG  ++  +T DGQV S G 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60

Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           N YGQLG   +  R    L+P +  F+ + IACG  HTL + E  Q+
Sbjct: 61  NDYGQLGHEKA--RKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQL 105


>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
            purpuratus]
          Length = 1139

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 28/211 (13%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
            G+ +  VA G  HT+ ++  G+++ WG    GQLG+G R       H  P    A SG+ 
Sbjct: 827  GIHVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDR-----NVHSRPVAVEALSGQ- 880

Query: 271  RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
            R L                    +ACG  H+ V+T    L +FGWG++GQ GHG   DQ+
Sbjct: 881  RCL-------------------SVACGQLHTLVLTQDQRLWSFGWGVHGQLGHGDVEDQI 921

Query: 331  RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
             P   + L    +  I+AG  H+  ++ +G+V++FG + FGQLGTG      VP  L+  
Sbjct: 922  LPKLVNQLSKCAIVGISAGYAHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKA- 980

Query: 391  ILESKRAKVVSCGARHSAVLTEDGQ-VLSWG 420
             L S    +++CG   +  +T + Q V +WG
Sbjct: 981  -LSSHHVSILTCGYYSNIAITSNPQKVYTWG 1010



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 26/252 (10%)

Query: 217  VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
            +A G  H  I+++ G V+ WG   EG+LG G  + +               G+  PL  R
Sbjct: 777  LACGQDHAAIVAN-GDVYTWGRAHEGRLGQGDIMSL--------------DGRAPPL--R 819

Query: 277  QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
              +++  G     +V+ +ACG  H+  VT  G L ++G   YGQ G G  N   RP    
Sbjct: 820  VETLHMHGI----HVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVE 875

Query: 337  SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
            +L   +   +A G  HT+ ++ + R++ FG    GQLG G  + + +PKL+      SK 
Sbjct: 876  ALSGQRCLSVACGQLHTLVLTQDQRLWSFGWGVHGQLGHGDVEDQILPKLVNQL---SKC 932

Query: 397  AKV-VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACG 454
            A V +S G  HS  LT DGQV  +G + +GQLG G      +P  L  +       + CG
Sbjct: 933  AIVGISAGYAHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCG 992

Query: 455  WWHTLLLAETTQ 466
            ++  + +    Q
Sbjct: 993  YYSNIAITSNPQ 1004



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 111/276 (40%), Gaps = 55/276 (19%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
            GD      P  V    G +   VA G  HTL+L+   ++W +G+G  GQLG G       
Sbjct: 863  GDRNVHSRPVAVEALSGQRCLSVACGQLHTLVLTQDQRLWSFGWGVHGQLGHGD------ 916

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                          +  P LV Q S        +  +  I+ G  HS  +T+ G +  FG
Sbjct: 917  -----------VEDQILPKLVNQLS--------KCAIVGISAGYAHSGALTNDGQVWMFG 957

Query: 315  WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE-GRVYVFGGN----- 368
               +GQ G GS      P    +L    V  +  G +  + I+    +VY +G +     
Sbjct: 958  SSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAITSNPQKVYTWGKSPLELR 1017

Query: 369  QFGQLGTGVDQA----------ENVPKLLETPILESKR-------------AKVVSCGAR 405
            Q  QL     Q+          + V +L   P LE++               K ++    
Sbjct: 1018 QALQLARKRHQSSRYSNPDPHHQTVTRLPSLP-LENQHLLPSLVPTNIQAPIKKMTMSGN 1076

Query: 406  HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            H  +LT  G + SWG N+ GQLG+G+ + +++P L+
Sbjct: 1077 HYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLI 1112



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 5/126 (3%)

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---VPKLLETPILESKRAKVVSC 402
           +A G  H   ++  G VY +G    G+LG G   + +    P  +ET  +     + V+C
Sbjct: 777 LACGQDHAAIVA-NGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRAVAC 835

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLL 461
           G  H+  +T++G++ SWG + YGQLG+GD    + P  V  + G    ++ACG  HTL+L
Sbjct: 836 GKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLHTLVL 895

Query: 462 AETTQI 467
            +  ++
Sbjct: 896 TQDQRL 901


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 123/247 (49%), Gaps = 29/247 (11%)

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            H++ L++ G+V+ WG G  G+LG G+  +                 + R +   QG    
Sbjct: 3279 HSMALTESGEVFSWGDGDYGKLGHGNSDR---------------QRRPRQIEALQG---- 3319

Query: 283  SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                    + ++ACG +HSAVV+  G L TFG G YG+ G G+T+++  P   ++L    
Sbjct: 3320 ------EEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQM 3373

Query: 343  VEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V Q+  GL HT+ +S +G  V+ FG   +G+LG G   A++ P+ ++   L     K V 
Sbjct: 3374 VGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDP--LCGIGVKKVC 3431

Query: 402  CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLL 460
            CG + S  LT+DG+V ++G  +        S + N P  VP +  F   ++  G  H+L 
Sbjct: 3432 CGTQFSVALTKDGRVFTFGQERLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLA 3491

Query: 461  LAETTQI 467
            L  T ++
Sbjct: 3492 LTSTGEV 3498



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 130/267 (48%), Gaps = 35/267 (13%)

Query: 232  QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS---GKDRPLLVR-QGSVN-----S 282
            + + WG G  GQL    R  + PT  + P    A     G++   +++  G+V      S
Sbjct: 3184 EAYMWGGGRHGQLAETGRSLLTPT--VTPSFSQAQQIICGQNCTFVIQANGTVQACGEGS 3241

Query: 283  SGKAGRSYVKEI-------------------ACGGR-HSAVVTDAGALLTFGWGLYGQCG 322
             G+ G+    ++                   +CG   HS  +T++G + ++G G YG+ G
Sbjct: 3242 YGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLG 3301

Query: 323  HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            HG+++ Q RP    +L   ++ Q+A G  H+  +S +G+++ FG   +G+LG G    + 
Sbjct: 3302 HGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKK 3361

Query: 383  VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLV 441
            +P+ +    LE +    V CG  H+  ++ DG  + S+G   YG+LGLG+S  ++ P  V
Sbjct: 3362 IPERVTA--LEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRV 3419

Query: 442  -PIHGFLPRNIACGWWHTLLLAETTQI 467
             P+ G   + + CG   ++ L +  ++
Sbjct: 3420 DPLCGIGVKKVCCGTQFSVALTKDGRV 3446



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 161/440 (36%), Gaps = 105/440 (23%)

Query: 23   YMWG-----YLPGT-----SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
            YMWG      L  T     +P  +P  S     +CG +    +   G   A      G+L
Sbjct: 3186 YMWGGGRHGQLAETGRSLLTPTVTPSFSQAQQIICGQNCTFVIQANGTVQACGEGSYGRL 3245

Query: 73   ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
               G++DD  Q  + S   G     F +     +V +     H +++TE+GEV++WG   
Sbjct: 3246 -GQGNSDDLHQLTIISALQG-----FVV---TQLVTSCGSDGHSMALTESGEVFSWG--- 3293

Query: 133  CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
                     D+G  G    D   +   +   Q        GEE+++    +   + S   
Sbjct: 3294 -------DGDYGKLGHGNSDRQRRPRQIEALQ--------GEEIIQ---MACGFKHSAVV 3335

Query: 193  ASGDEFFTLS-----------------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVW 234
            ++  + FT                   P  VT   G  + +V  G  HTL +S D   VW
Sbjct: 3336 SADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVW 3395

Query: 235  GWGYGGEGQLGLGSRIKMVPTPHLIPC----LEHAASGKDRPL-LVRQGSVNSSGKA--- 286
             +G G  G+LGLG+         + P     ++    G    + L + G V + G+    
Sbjct: 3396 SFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLI 3455

Query: 287  ----GRS---------------YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
                 RS               +V+++  G  HS  +T  G +  +G    GQ G G TN
Sbjct: 3456 GQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTN 3515

Query: 328  DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
             +  P   ++L    V Q                  V+G N  GQLG G   A   P L+
Sbjct: 3516 ARREPCLVTALQGKNVRQ------------------VWGSNGDGQLGIGDTNARREPCLV 3557

Query: 388  ETPILESKRAKVVSCGARHS 407
                L+ K  + +S G  HS
Sbjct: 3558 TD--LQGKNVRQISAGRNHS 3575


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAG 349
           + +I CG  HS  ++  G L  +G  L+GQ G G        P     L  I + QI+AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAG 199

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
             H++ +S+ G +Y +G N+FGQLG    ++++ P L+E   L++++ + ++CG  H+A+
Sbjct: 200 EAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKVEFLACGGSHTAL 257

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           LT+DG + ++G  K+GQLG   + +   P LV  + G     IACG WHTL
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTL 308



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 101/201 (50%), Gaps = 29/201 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
           KI ++  G  H+L LS  G+++ WG    GQLG+G +     TP +      IP  + +A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISA 198

Query: 267 SGKDRPLLVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVV 304
                  L   G++     N  G+ G  +                 V+ +ACGG H+A++
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVY 363
           T  G L TFG G +GQ GH ST ++LRP   + L   +V QIA G WHT+  +S  G+V+
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVF 318

Query: 364 VFGGNQFGQLGTGVDQAENVP 384
            FG  + GQLG G  + + +P
Sbjct: 319 SFGSGKEGQLGNGGTRDQLIP 339



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 4/132 (3%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPIL 392
           + S L + ++ QI  G +H++ +S  G ++ +G N  GQLG G    +   P+++E   L
Sbjct: 131 FESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH--L 188

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI 451
                  +S G  HS  L+  G + SWG N++GQLGL  +  ++ PSL+  +       +
Sbjct: 189 SGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFL 248

Query: 452 ACGWWHTLLLAE 463
           ACG  HT LL +
Sbjct: 249 ACGGSHTALLTQ 260


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 118/254 (46%), Gaps = 32/254 (12%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L              
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK---------- 129

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYA 335
                         + +++CG  HS  ++    + ++G   +GQ G G     Q  P   
Sbjct: 130 --------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---- 391
            SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NVP     P+    
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS---GRNVPVQSNKPLSVGA 232

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
           L++     +SCG  H+AVLT+DG+V ++G N+ GQLG   + ++  P LV     L   I
Sbjct: 233 LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQI 292

Query: 452 ACGWWHTLLLAETT 465
            CG +HTL    TT
Sbjct: 293 DCGSYHTLAYVHTT 306



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 36/222 (16%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           ++TLN  +KI +V+ G  H+L LS   QV+ WG    GQLGLG       +P  +  LE 
Sbjct: 122 IMTLN-DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEG 180

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCG 322
                  PL                   ++A GG HS  ++  G   +FGWG    GQ  
Sbjct: 181 I------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNSAGQLA 214

Query: 323 HGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
               N  +   +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N+ GQLG     
Sbjct: 215 LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTP 274

Query: 380 AENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
            +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 275 EKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 7/164 (4%)

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
           G D   L R+ +  S G    + + + A G RHS ++     +L+ G    GQ G     
Sbjct: 6   GADSRELQRRRTAGSPG----AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQ 61

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKL 386
               P    +L  + V+ ++ G  H++ +  +GRV+ +G    GQLG G   +    PK 
Sbjct: 62  RGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKK 121

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           + T  L   +   VSCG  HS  L++D QV SWG N +GQLGLG
Sbjct: 122 IMT--LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 163



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG    Q   +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLIVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      ++ ++      ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
          Length = 385

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 119/257 (46%), Gaps = 32/257 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           +  V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L           
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK------- 129

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
                            + +++CG  HS  ++    + ++G   +GQ G G     Q  P
Sbjct: 130 -----------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASP 172

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI- 391
               SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NVP     P+ 
Sbjct: 173 QRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL---SGRNVPVQSNKPLS 229

Query: 392 ---LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
              L++     +SCG  H+AVLT+DG+V ++G N+ GQLG   + ++  P LV     L 
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLV 289

Query: 449 RNIACGWWHTLLLAETT 465
             I CG +HTL    TT
Sbjct: 290 SQIDCGSYHTLAYVHTT 306



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 36/222 (16%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           ++TLN  +KI +V+ G  H+L LS   QV+ WG    GQLGLG       +P  +  LE 
Sbjct: 122 IMTLND-IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEG 180

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCG 322
                  PL                   ++A GG HS  ++  G   +FGWG    GQ  
Sbjct: 181 I------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNSAGQLA 214

Query: 323 HGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
               N  +   +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N+ GQLG     
Sbjct: 215 LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTP 274

Query: 380 AENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
            +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 275 EKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 9/198 (4%)

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
           G D   L R+ +  S G    + + + A G RHS ++     +L+ G    GQ G     
Sbjct: 6   GADSRELQRRRTAGSPG----AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQ 61

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKL 386
               P    +L  + V+ ++ G  H++ +  +GRV+ +G    GQLG G   +    PK 
Sbjct: 62  RGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKK 121

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLV-PIH 444
           + T  L   +   VSCG  HS  L++D QV SWG N +GQLGLG     +  P  V  + 
Sbjct: 122 IMT--LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 445 GFLPRNIACGWWHTLLLA 462
           G     +A G  H+  L+
Sbjct: 180 GIPLAQVAAGGAHSFALS 197



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG    Q   +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLIVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      ++ ++      ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  IACGGRH+ +VT  G + ++G    G+ GHG   D   P    +L    VE +A G 
Sbjct: 292 VHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGE 351

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G   + +G LG G + +  +P+ +    +E  R   +SCGA H+A
Sbjct: 352 YHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQ-MEGIRVSYISCGAWHTA 410

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           V+T  GQ+ ++G   +G LG GD I  N P  V  + G     +ACG WHT    E
Sbjct: 411 VVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVE 466



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 131/267 (49%), Gaps = 43/267 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G++++ ++ G  HT +++  GQ++ +G G  G LG G               +H  S   
Sbjct: 396 GIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHG---------------DHITSNFP 440

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV-------VTDAGA--------LLTFGW 315
           R +   +G   +          ++ACG  H+A        ++D+G         L T+G 
Sbjct: 441 REVETLRGLRTT----------KVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGD 490

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           G  G+ GHG    +L P   ++LM+ ++ Q+A G   TV ++  GRVY  G   +GQLG+
Sbjct: 491 GDKGRLGHGDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGS 550

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
                + +P  +E  I  S   + V+CG+ H AVLT   +V +WG    GQLG GD+  R
Sbjct: 551 ATANGK-LPTCVEGEIANS-FVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHR 608

Query: 436 NIPSLVPI-HGFLPRNIACGWWHTLLL 461
           N P++V +      +N+ACG   T+++
Sbjct: 609 NTPTIVDVLKDKQVKNVACGSKFTVVI 635



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 52/299 (17%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-----SRIKMVPT-----PHLIPCLEHAA 266
           +A GGRH ++++  G+++ WG    G+LG G     S  K++ T       L+ C E+  
Sbjct: 295 IACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHT 354

Query: 267 -------------SGKDRPLLVRQGSVNS-------SGKAGRSYVKEIACGGRHSAVVTD 306
                         G     L+  GS  S       SG+     V  I+CG  H+AVVT 
Sbjct: 355 CAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTS 414

Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG------ 360
           AG L TFG G +G  GHG       P    +L  ++  ++A G+WHT   +VE       
Sbjct: 415 AGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAA-AVEAINELSD 473

Query: 361 ----------RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
                     ++Y +G    G+LG G ++   VP+ +    L  +R   V+CG   +  L
Sbjct: 474 SGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAA--LMEERICQVACGNDLTVAL 531

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           T  G+V + G   YGQLG   + +  +P+ V   I       +ACG +H  +L    ++
Sbjct: 532 TTAGRVYTMGSTAYGQLGSA-TANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEV 589



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 160/394 (40%), Gaps = 86/394 (21%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKA 109
           DV G  CG   A+  +  G++ +WG   +E    L  G   +   P  + T +  +V   
Sbjct: 291 DVHGIACGGRHAVLVTRQGEIFSWG---EESGGRLGHGVEADVSHPKIIDTLSGTNVELV 347

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           A G  H  +VT +G++YTWG          T ++G  G   + S             P  
Sbjct: 348 ACGEYHTCAVTLSGDLYTWG--------DGTHNYGLLGHGSEVS----------HWIPQK 389

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLS-----------------PCLVTLNPGV 212
                E ++    S     +    S  + FT                   P  V    G+
Sbjct: 390 VSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGL 449

Query: 213 KITKVAAGGRHTLI-------LSDMG--------QVWGWGYGGEGQLGLGSRIKMVPTPH 257
           + TKVA G  HT         LSD G        +++ WG G +G+LG G        P 
Sbjct: 450 RTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDN-----EPR 504

Query: 258 LIP-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
           L+P C+  AA  ++R                   + ++ACG   +  +T AG + T G  
Sbjct: 505 LVPECV--AALMEER-------------------ICQVACGNDLTVALTTAGRVYTMGST 543

Query: 317 LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            YGQ G  + N +L       + +  VE++A G +H   ++ +  VY +G    GQLG G
Sbjct: 544 AYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHG 603

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            +   N P +++  +L+ K+ K V+CG++ + V+
Sbjct: 604 DNNHRNTPTIVD--VLKDKQVKNVACGSKFTVVI 635



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 6/152 (3%)

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           QC   S  D L P    S + + V  IA G  H V ++ +G ++ +G    G+LG GV+ 
Sbjct: 269 QCSLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEA 328

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW--GWNKYGQLGLGDSIDRNI 437
             + PK+++T  L     ++V+CG  H+  +T  G + +W  G + YG LG G  +   I
Sbjct: 329 DVSHPKIIDT--LSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWI 386

Query: 438 PSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
           P  V   + G     I+CG WHT ++    Q+
Sbjct: 387 PQKVSGQMEGIRVSYISCGAWHTAVVTSAGQL 418



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 25/165 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD    L P  V      +I +VA G   T+ L+  G+V+  G    GQLG  +    +P
Sbjct: 499 GDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLP 558

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           T     C+E                    G+   S+V+E+ACG  H AV+T    + T+G
Sbjct: 559 T-----CVE--------------------GEIANSFVEEVACGSYHVAVLTSKNEVYTWG 593

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            GL GQ GHG  N +  P+    L D QV+ +A G   TV I + 
Sbjct: 594 KGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVICIH 638


>gi|299116189|emb|CBN74538.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 531

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 186/444 (41%), Gaps = 86/444 (19%)

Query: 15  EECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
           EE ++  V +   LPG S  +      + A  CGG +             A +ESG++ T
Sbjct: 128 EEMRDMDVKVPRLLPGLSKHR------VTAVTCGGIA-----------TAALTESGRVFT 170

Query: 75  WGSADDEGQSYLTSGKHGETPEPFPLPTE-----ASVVKAAAGWAHCVSVTEAGEVYTWG 129
           WGS+DD G   L+     + PE FP   +     A+++  A+G    +++  +G+VY WG
Sbjct: 171 WGSSDDGGIGRLSGP---DAPEQFPGEVKEGLEGATIIGLASGDCQTIALDLSGKVYGWG 227

Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK--RAGEEVVKRRKTSSARE 187
              C                 KD  GKQ      QAP +DK  +A +   KR        
Sbjct: 228 ---CF----------------KDKEGKQWF----QAP-ADKGSKACKGAAKR-------- 255

Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
                          P +++  P   +  +  G    L L+  G+V  WG G  G+LG  
Sbjct: 256 ---------------PIVISGLP-PHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGRE 299

Query: 248 -SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS--GKAGRSYVKEIACGGRHSAVV 304
              +K+ P P       +   G  R  L   G   ++  G A    VK I CG  HS +V
Sbjct: 300 VCSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLLV 359

Query: 305 TDAGA-LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           T A A +   G   YGQ G G T+++ R +    L  +    +A G  H++ ++ EG ++
Sbjct: 360 TRADADVYACGLNSYGQLGLGDTDNRKRLALVRDLAALNTMAVAGGGMHSLVLTTEG-LF 418

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILE------SKRAKVVSCGARHSAVLTEDGQVL 417
            FG    GQLG      +      ET  +E      +   + V CG  H  V+T+  ++ 
Sbjct: 419 SFGRKDSGQLGCTAAINKGDWGAFETSPMEVHLPSGAGSPRKVECGTNHCLVITDKHELY 478

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLV 441
           +WG+ + G LG G  +D N+P  V
Sbjct: 479 TWGYGEMGALGHGKDVDCNLPKKV 502



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 56/295 (18%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  I  +A+G   T+ L   G+V+GWG   + +   G +    P        + AA    
Sbjct: 201 GATIIGLASGDCQTIALDLSGKVYGWGCFKDKE---GKQWFQAPADKGSKACKGAAK--- 254

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH------- 323
           RP+++       SG     +V +I CG      +T AG +L++G G  G+ G        
Sbjct: 255 RPIVI-------SGLP--PHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREVCSMKV 305

Query: 324 ---------------GSTNDQLRPSYASSLMDI------QVEQIAAGLWHTVCIS-VEGR 361
                          G   D L P+      +        V+ I  G +H++ ++  +  
Sbjct: 306 PPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLLVTRADAD 365

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           VY  G N +GQLG G    +N  +L     L +     V+ G  HS VLT +G + S+G 
Sbjct: 366 VYACGLNSYGQLGLG--DTDNRKRLALVRDLAALNTMAVAGGGMHSLVLTTEG-LFSFGR 422

Query: 422 NKYGQLGLGDSIDRN---------IPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
              GQLG   +I++          +   +P     PR + CG  H L++ +  ++
Sbjct: 423 KDSGQLGCTAAINKGDWGAFETSPMEVHLPSGAGSPRKVECGTNHCLVITDKHEL 477



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 88/222 (39%), Gaps = 42/222 (18%)

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           H    +D GQV   G G  GQLG G+   R   V  P L+P L                 
Sbjct: 102 HQTFFADHGQVHMCGNGDCGQLGFGTEEMRDMDVKVPRLLPGLS---------------- 145

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND---QLRPSYAS 336
                   +  V  + CGG  +A +T++G + T+G    G  G  S  D   Q       
Sbjct: 146 --------KHRVTAVTCGGIATAALTESGRVFTWGSSDDGGIGRLSGPDAPEQFPGEVKE 197

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFG------GNQFGQLGTGVDQAENVPK-LLET 389
            L    +  +A+G   T+ + + G+VY +G      G Q+ Q     D+     K   + 
Sbjct: 198 GLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQ--APADKGSKACKGAAKR 255

Query: 390 PILES---KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
           PI+ S        + CG      LT  G+VLSWG  + G+LG
Sbjct: 256 PIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELG 297


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 99/181 (54%), Gaps = 4/181 (2%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
           A R  V+ I+CGGRH+A+VT  G + ++G    G+ GHG   D  +P    +L  + +E 
Sbjct: 107 AVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIEL 166

Query: 346 IAAGLWHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           +A G +HT  +++ G +Y +G    +FG LG G D +  VPK +  P LE      +SCG
Sbjct: 167 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGP-LEGIHVSSISCG 225

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
             H+A++T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + 
Sbjct: 226 PWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVV 285

Query: 463 E 463
           E
Sbjct: 286 E 286



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 49/272 (18%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  ++ GGRH  +++  G+++ WG    G+LG G     V  P LI  L H       
Sbjct: 110 LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD-VSQPKLIDALSHMN----- 163

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                              ++ +ACG  H+  VT +G L T+G G   +G  GHG+    
Sbjct: 164 -------------------IELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSH 204

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P + +  ++ I V  I+ G WHT  ++  G+++ FG   FG LG G  ++ +VP+ +E
Sbjct: 205 WVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVE 264

Query: 389 TPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLGDSIDRN 436
           +  L+  R    +CG  H+A + E             G++ +WG    G+LG GD   + 
Sbjct: 265 S--LKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKL 322

Query: 437 IPSLVPIHGFLPRN---IACGWWHTLLLAETT 465
           +P+ V     +  N   +ACG  H L +A TT
Sbjct: 323 VPTCVA--ALVEPNFCQVACG--HCLTVALTT 350



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 120/257 (46%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R + +  P  +  L+       
Sbjct: 216 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDR-ESISVPREVESLK------- 267

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G + T+G G  
Sbjct: 268 ----------------GLRTVRA-ACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 310

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 311 GRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN--T 368

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           QA+ +  +     L     + +SCGA H AVLT   +V +WG    G+LG GD+ D+N P
Sbjct: 369 QADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNTP 428

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     R++ CG
Sbjct: 429 TLVEALKDKQVRSVVCG 445



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P      + + V+ I+ G  H   ++ +G +Y +G    G+LG GVD   + PKL+
Sbjct: 97  DCLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLI 156

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV--PI 443
           +   L     ++V+CG  H+  +T  G + +WG    K+G LG G+ +   +P  V  P+
Sbjct: 157 DA--LSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPL 214

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G    +I+CG WHT L+    Q+
Sbjct: 215 EGIHVSSISCGPWHTALVTSAGQL 238



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 25/165 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G V+  G    GQLG      M+P
Sbjct: 316 GDKEAKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQADGMLP 375

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                    V   GK  +++V+EI+CG  H AV+T    + T+G
Sbjct: 376 -------------------------VRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWG 410

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            G  G+ GHG T+D+  P+   +L D QV  +  G+  T  I + 
Sbjct: 411 KGANGRLGHGDTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIH 455



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 41/213 (19%)

Query: 211 GVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPH 257
           G++  + A G  HT  + ++            G+++ WG G +G+LG G +  K+VPT  
Sbjct: 268 GLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPT-- 325

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
              C+           LV                 ++ACG   +  +T +G + T G  +
Sbjct: 326 ---CVA---------ALVEPNFC------------QVACGHCLTVALTTSGHVYTMGSAV 361

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           YGQ G+   +  L       L    VE+I+ G +H   ++    VY +G    G+LG G 
Sbjct: 362 YGQLGNTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 421

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +N P L+E   L+ K+ + V CG   +A +
Sbjct: 422 TDDKNTPTLVEA--LKDKQVRSVVCGINFTAAI 452


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 169/410 (41%), Gaps = 55/410 (13%)

Query: 32  SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
           +P+K P LS + A              G   +LA    G +  WGS +  GQ  L  G  
Sbjct: 141 TPQKVPGLSDVVA-----------VAAGEFHSLALRADGTVWAWGS-NFYGQ--LGRGHS 186

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
              P P  +     VV  AAG+   ++V   G V+ WG       A  +   G     Q+
Sbjct: 187 QPGPSPAQVVGLTGVVALAAGFDFSLAVRSDGTVWAWG-------ANGSGQLGDGTYIQR 239

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
            +  + S L    A  +        ++   T  A   + +   GD  +T  P  V +   
Sbjct: 240 LAPTQVSQLQGVSAVTAGLYH-ALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSI 298

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +   VAA    +L+L D G V+ WG   +GQLG+G+                     D 
Sbjct: 299 ARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTT-------------------ADS 339

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           PL VR          G   V  +A G +H+ V+   G L T+G G  GQ GHGS+   L 
Sbjct: 340 PLPVR--------VRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLS 391

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P   + L +  V  +A+G +H+V    +G V+ +G N  GQLG G     ++P  +  P 
Sbjct: 392 PEVVTRLSN--VASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLP--VRVPG 447

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           L    +  VS    HS  L  DG V  WG N  GQ+G G + DR  P+ V
Sbjct: 448 LSGVVS--VSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKDRASPARV 495



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 168/413 (40%), Gaps = 55/413 (13%)

Query: 29  PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
           PG SP +   L+ + A   G D           F+LA    G +  WG+    G   L  
Sbjct: 188 PGPSPAQVVGLTGVVALAAGFD-----------FSLAVRSDGTVWAWGA---NGSGQLGD 233

Query: 89  GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
           G + +   P  +     V    AG  H +++   G V+ WG       +  +   G    
Sbjct: 234 GTYIQRLAPTQVSQLQGVSAVTAGLYHALALRSDGTVWAWG-------SNSSGQMGDGTW 286

Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
             + S  + +++   +A  + + AG  V+       A   +     G      SP  V +
Sbjct: 287 TDRPSPVQVTSIARAKAVAA-QDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRV 345

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
                +T +AAG +H ++L   G +W WG+G  GQLG GS  +M+ +P ++  L + AS 
Sbjct: 346 RGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERML-SPEVVTRLSNVAS- 403

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                    +A G  HS      G++ T+G    GQ G G+T +
Sbjct: 404 -------------------------VASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTE 438

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           +  P     L    V  ++A   H+  +  +G V+ +G N  GQ+G G  +    P  +E
Sbjct: 439 RHLPVRVPGLSG--VVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKDRASPARVE 496

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L S   K ++ G  H   L  DG V +WG+N  GQLG G + DR  P  V
Sbjct: 497 G--LSS--VKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQV 545



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 185/469 (39%), Gaps = 81/469 (17%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
            P K   L  + A L GGDS           ++     G + TWG+    G   L  G  G
Sbjct: 842  PAKVEGLWGVVAVLAGGDS-----------SMVLRADGTVWTWGA---NGSGQLGDGTLG 887

Query: 93   ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
            +   P  +   A +     G AH + V++ G V+ WG              G  G    D
Sbjct: 888  DRASPLEVKGLAGIATGVMGEAHALVVSQDGTVWAWG----------ANGRGQLG----D 933

Query: 153  STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA-----------REESENPASGDEFFTL 201
             T   SA P   A  S   A   V   +  S A             +S     G      
Sbjct: 934  GTTTSSASPVRVAGLS---AAMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDGTNVART 990

Query: 202  SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHL 258
            +P  V     VK   V AG  H + +   G VWGWG    GQ+G G+   R + V    L
Sbjct: 991  TPKPVQDLADVK--AVTAGAHHVVAVRHDGTVWGWGANAFGQVGDGTHFWRFRPVRVEGL 1048

Query: 259  IPCLEHAAS--------GKDRPLLVRQGSVNSSGKA---------------GRSYVKEIA 295
            +  +E +A         G +R L          G A                +  V  ++
Sbjct: 1049 LNAVETSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSLEPVGVKLPSSKVLVPAVS 1108

Query: 296  CGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
                 +H+A +   G + T+G    GQ G G+T  +  P   + L  +    +A    HT
Sbjct: 1109 VSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPITVAGLGAMVA--VAPAARHT 1166

Query: 354  VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
            + +  +G V+ +G N FGQLG G     N  + L   ++  ++   ++ G+ HS  + ED
Sbjct: 1167 LALRSDGTVWAWGDNTFGQLGDG----SNTRRTLPVQVVGLEKVTAIAAGSYHSLAVRED 1222

Query: 414  GQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLL 461
            G V +WG+N +GQLG G    R +P+ ++ + G +   +A G +H+L+L
Sbjct: 1223 GTVWAWGYNVFGQLGDGTMDARAVPTRMLGLDGAVA--VAGGEYHSLML 1269



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 127/277 (45%), Gaps = 33/277 (11%)

Query: 210 PGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA--- 265
           PG+  +T +AAG  H+L L     VW WG    GQ+G G+ +   PTP  +P L      
Sbjct: 96  PGLTDVTSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDR-PTPQKVPGLSDVVAV 154

Query: 266 ASGKDRPLLVR-QGSV-----NSSGKAGRSY---------------VKEIACGGRHSAVV 304
           A+G+   L +R  G+V     N  G+ GR +               V  +A G   S  V
Sbjct: 155 AAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTGVVALAAGFDFSLAV 214

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
              G +  +G    GQ G G+   +L P+  S L    V  + AGL+H + +  +G V+ 
Sbjct: 215 RSDGTVWAWGANGSGQLGDGTYIQRLAPTQVSQLQG--VSAVTAGLYHALALRSDGTVWA 272

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G N  GQ+G G       P      +    RAK V+     S VL +DG V +WG N  
Sbjct: 273 WGSNSSGQMGDGTWTDRPSP----VQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQ 328

Query: 425 GQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
           GQLG+G + D  +P  V   G +  ++A G  H ++L
Sbjct: 329 GQLGIGTTADSPLPVRVRGLGAVT-SLAAGTQHAVVL 364



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 102/229 (44%), Gaps = 33/229 (14%)

Query: 214  ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
            +  VA   RHTL L   G VW WG    GQLG GS  +                 +  P+
Sbjct: 1156 MVAVAPAARHTLALRSDGTVWAWGDNTFGQLGDGSNTR-----------------RTLPV 1198

Query: 274  LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
             V           G   V  IA G  HS  V + G +  +G+ ++GQ G G+ + +  P+
Sbjct: 1199 QV----------VGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPT 1248

Query: 334  YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
                L D  V  +A G +H++ +  +G ++  G N  GQLG G        +L    ++E
Sbjct: 1249 RMLGL-DGAVA-VAGGEYHSLMLRFDGTLWATGNNSHGQLGEGT----FTNRLSPFQVVE 1302

Query: 394  SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
              + + V  G  HS  L EDG V +WG N  GQLG G    R +P+ VP
Sbjct: 1303 LDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVP 1351



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 172/435 (39%), Gaps = 57/435 (13%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   ++A    G + TWG  +  GQ  L  G   E   P  +P  + VV  +A   H  +
Sbjct: 407 GSFHSVAALSDGSVWTWGR-NTNGQ--LGDGTTTERHLPVRVPGLSGVVSVSASGHHSFA 463

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           +   G V+ WG              G   +  + S  +   L + +A  S    G  +V 
Sbjct: 464 LRSDGTVWGWG-------RNAQGQMGDGTTKDRASPARVEGLSSVKALAS---GGSHMVA 513

Query: 179 RRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
            R   +      N A   GD   T     V +     +T VAAG   +L L   G VW W
Sbjct: 514 LRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSVAAGAYFSLALRTDGTVWAW 573

Query: 237 GYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGR 288
           G G EGQLG G+   R   V    L   ++ AA       +   G+V     N+ G+ G 
Sbjct: 574 GDGFEGQLGDGAGVQRASPVQVTGLTRVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGD 633

Query: 289 ---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                          + V  +  G  HS  +   G L  +G   YGQ G G    ++   
Sbjct: 634 GSWSDRFRAVQVYGLTGVSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTPRVVAG 693

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
               L  I++  + A   H + +  +G +  +G N+FGQLG G     ++P      +  
Sbjct: 694 AVPGLSGIKL--LGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSLP----VQVRG 747

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC 453
             + + +S G  HS ++  DG VL+WG N  GQLG G +  R  P        L RN+ C
Sbjct: 748 LGQGRRLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASP-------VLARNLPC 800

Query: 454 ------GWWHTLLLA 462
                 G  H+L+LA
Sbjct: 801 ARAASAGRQHSLVLA 815



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 160/394 (40%), Gaps = 76/394 (19%)

Query: 71   KLITWGSADDEGQSYLTSGKHGETPEPF--PLPTEASVVKAAA--GW-AHCVSVTEAGEV 125
            + ++WGS  + GQ  L   + G + EP    LP+   +V A +   W  H  ++   G V
Sbjct: 1069 RALSWGS-HEYGQ--LGDAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTV 1125

Query: 126  YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
             TWG              G+A     D T +  A P   A      A       R T + 
Sbjct: 1126 QTWG--------------GNADGQLGDGTTESRATPITVAGLGAMVAVAPAA--RHTLAL 1169

Query: 186  REESENPASGDEFF-----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
            R +    A GD  F           TL   +V L    K+T +AAG  H+L + + G VW
Sbjct: 1170 RSDGTVWAWGDNTFGQLGDGSNTRRTLPVQVVGLE---KVTAIAAGSYHSLAVREDGTVW 1226

Query: 235  GWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
             WGY   GQLG G+   + VPT  L                            G      
Sbjct: 1227 AWGYNVFGQLGDGTMDARAVPTRML----------------------------GLDGAVA 1258

Query: 294  IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
            +A G  HS ++   G L   G   +GQ G G+  ++L P     L   QV  + AG +H+
Sbjct: 1259 VAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVEL--DQVRTVRAGGYHS 1316

Query: 354  VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
            V +  +G V+ +G N  GQLG G      VP     P L +    + S GA  S      
Sbjct: 1317 VALREDGTVWTWGHNGQGQLGDGTVTTRRVPA--PVPGLTA----IASVGAGTSHTFAVG 1370

Query: 414  GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGF 446
             +  +WG N +GQLG GDS DR  P+LV  +HG 
Sbjct: 1371 SETWAWGRNSHGQLGTGDSSDRLEPTLVKGLHGV 1404



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 112/252 (44%), Gaps = 32/252 (12%)

Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS----RIKMVPTPHLIPCLEHAASGKD 270
           +KVAAG +H+L ++  G VW WG  G GQLG GS    R+     P L      AA G  
Sbjct: 51  SKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGLTDVTSIAA-GDA 109

Query: 271 RPLLVRQGSV------NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGA 309
             L +R          N++G+ G                S V  +A G  HS  +   G 
Sbjct: 110 HSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSDVVAVAAGEFHSLALRADGT 169

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           +  +G   YGQ G G  + Q  PS A  +    V  +AAG   ++ +  +G V+ +G N 
Sbjct: 170 VWAWGSNFYGQLGRG--HSQPGPSPAQVVGLTGVVALAAGFDFSLAVRSDGTVWAWGANG 227

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            GQLG G      + +L  T + + +    V+ G  H+  L  DG V +WG N  GQ+G 
Sbjct: 228 SGQLGDGT----YIQRLAPTQVSQLQGVSAVTAGLYHALALRSDGTVWAWGSNSSGQMGD 283

Query: 430 GDSIDRNIPSLV 441
           G   DR  P  V
Sbjct: 284 GTWTDRPSPVQV 295



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 151/377 (40%), Gaps = 59/377 (15%)

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           +P    V   AAG AH +++     V+TWG            + G  G       G    
Sbjct: 95  VPGLTDVTSIAAGDAHSLALRADRTVWTWG----------GNNAGQVGD------GTNVD 138

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL----------SPCLVTLN 209
            PT Q  P              + + R +    A G  F+            SP  V   
Sbjct: 139 RPTPQKVPGLSDVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGL 198

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT--------PHLIP 260
            GV    +AAG   +L +   G VW WG  G GQLG G+ I ++ PT          +  
Sbjct: 199 TGV--VALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVSQLQGVSAVTA 256

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAG------RSYVKEIACGGRHSAVVT-DAGALL-- 311
            L HA + +    +   GS NSSG+ G      R    ++    R  AV   DAG+L+  
Sbjct: 257 GLYHALALRSDGTVWAWGS-NSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGSLVLL 315

Query: 312 ----TFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
                F WGL   GQ G G+T D   P     L    V  +AAG  H V +  +G ++ +
Sbjct: 316 DDGGVFAWGLNSQGQLGIGTTADSPLPVRVRGLG--AVTSLAAGTQHAVVLRADGTLWTW 373

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G    GQLG G  +    P++    +        V+ G+ HS     DG V +WG N  G
Sbjct: 374 GHGATGQLGHGSSERMLSPEV----VTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNG 429

Query: 426 QLGLGDSIDRNIPSLVP 442
           QLG G + +R++P  VP
Sbjct: 430 QLGDGTTTERHLPVRVP 446



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 153/387 (39%), Gaps = 52/387 (13%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
            LA  E G L+TWG  +  GQ  L  G  G +  P  +       + +AG AH + V   G
Sbjct: 712  LAVREDGMLLTWGY-NRFGQ--LGLGAAGWSSLPVQVRGLGQGRRLSAGRAHSLLVRADG 768

Query: 124  EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
             V  WG          +   G   +  + S      LP  +A  S  R    V+    T 
Sbjct: 769  TVLAWG-------QNTSGQLGDGSTTHRASPVLARNLPCARAA-SAGRQHSLVLACDGTV 820

Query: 184  SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
             +   +     GD   T       +     +  V AGG  +++L   G VW WG  G GQ
Sbjct: 821  WSWGGNSQGQLGDGGVTSRAYPAKVEGLWGVVAVLAGGDSSMVLRADGTVWTWGANGSGQ 880

Query: 244  LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
            LG G+             L   AS    PL V+          G + +     G  H+ V
Sbjct: 881  LGDGT-------------LGDRAS----PLEVK----------GLAGIATGVMGEAHALV 913

Query: 304  VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL---MDIQVEQIAAGLWHTVCISVEG 360
            V+  G +  +G    GQ G G+T     P   + L   M++ V Q      +++ +  +G
Sbjct: 914  VSQDGTVWAWGANGRGQLGDGTTTSSASPVRVAGLSAAMNVSVGQA-----YSLAVLPDG 968

Query: 361  RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
             V+ +G N  GQLG G + A   PK    P+ +    K V+ GA H   +  DG V  WG
Sbjct: 969  TVWSWGANDSGQLGDGTNVARTTPK----PVQDLADVKAVTAGAHHVVAVRHDGTVWGWG 1024

Query: 421  WNKYGQLGLGDSIDRNIPSLVPIHGFL 447
             N +GQ+G G    R  P  V + G L
Sbjct: 1025 ANAFGQVGDGTHFWRFRP--VRVEGLL 1049



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 164/422 (38%), Gaps = 80/422 (18%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           + A    G +  WG      Q  +  G   +   P  +   +SV   A+G +H V++   
Sbjct: 461 SFALRSDGTVWGWGR---NAQGQMGDGTTKDRASPARVEGLSSVKALASGGSHMVALRTD 517

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G V+TWG             +  AG     +T             +D+RA  +V      
Sbjct: 518 GTVWTWG-------------YNGAGQLGDGTT-------------TDRRAPVQVTGLSGV 551

Query: 183 SSA----------REESENPASGDEF----------FTLSPCLVTLNPGVKITKVAAGGR 222
           +S           R +    A GD F             SP  VT     ++ K+AAG  
Sbjct: 552 TSVAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRASPVQVTGL--TRVVKLAAGAA 609

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHL------IPCLEHA-ASGKDRP 272
           H L + D G VW WG   EGQ+G GS   R + V    L      +  L H+ A  +D  
Sbjct: 610 HGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVYGLTGVSSVVGGLYHSMALAQDGT 669

Query: 273 LLVRQGS-------------VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
           L    G+             V +    G S +K +     H   V + G LLT+G+  +G
Sbjct: 670 LRAWGGNAYGQFGDGGVTPRVVAGAVPGLSGIKLLGASYLHVLAVREDGMLLTWGYNRFG 729

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           Q G G+      P     L   Q  +++AG  H++ +  +G V  +G N  GQLG G   
Sbjct: 730 QLGLGAAGWSSLPVQVRGLG--QGRRLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTT 787

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
               P L     L   RA   S G +HS VL  DG V SWG N  GQLG G    R  P+
Sbjct: 788 HRASPVLARN--LPCARAA--SAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPA 843

Query: 440 LV 441
            V
Sbjct: 844 KV 845



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 164/425 (38%), Gaps = 53/425 (12%)

Query: 43  PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
           PAR+ G  S K +  GG    +A    G + TWG     G   L  G   +   P  +  
Sbjct: 492 PARVEGLSSVKALASGGS-HMVALRTDGTVWTWGY---NGAGQLGDGTTTDRRAPVQVTG 547

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
            + V   AAG    +++   G V+ WG              G     Q+ S  + + L T
Sbjct: 548 LSGVTSVAAGAYFSLALRTDGTVWAWG-------DGFEGQLGDGAGVQRASPVQVTGL-T 599

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
                +   A    V+   T  A  ++     GD  ++     V +     ++ V  G  
Sbjct: 600 RVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVYGLTGVSSVVGGLY 659

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLG--------------SRIKMVPTPHLIPCLEHAASG 268
           H++ L+  G +  WG    GQ G G              S IK++   +L     H  + 
Sbjct: 660 HSMALAQDGTLRAWGGNAYGQFGDGGVTPRVVAGAVPGLSGIKLLGASYL-----HVLAV 714

Query: 269 KDRPLLVRQGSVNSSGKAGRSYV---------------KEIACGGRHSAVVTDAGALLTF 313
           ++  +L+  G  N  G+ G                   + ++ G  HS +V   G +L +
Sbjct: 715 REDGMLLTWG-YNRFGQLGLGAAGWSSLPVQVRGLGQGRRLSAGRAHSLLVRADGTVLAW 773

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G    GQ G GST  +  P  A +L   +    +AG  H++ ++ +G V+ +GGN  GQL
Sbjct: 774 GQNTSGQLGDGSTTHRASPVLARNLPCARAA--SAGRQHSLVLACDGTVWSWGGNSQGQL 831

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
           G G   +   P  +E           V  G   S VL  DG V +WG N  GQLG G   
Sbjct: 832 GDGGVTSRAYPAKVEGLW----GVVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLG 887

Query: 434 DRNIP 438
           DR  P
Sbjct: 888 DRASP 892



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 135/339 (39%), Gaps = 66/339 (19%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
            LA    G +  WG   D     L  G +     P  +     V   AAG  H ++V E G
Sbjct: 1167 LALRSDGTVWAWG---DNTFGQLGDGSNTRRTLPVQVVGLEKVTAIAAGSYHSLAVREDG 1223

Query: 124  EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA--PPSDKRAGEE----VV 177
             V+ WG+            FG  G    D T    A+PT       +   AG E    ++
Sbjct: 1224 TVWAWGYNV----------FGQLG----DGTMDARAVPTRMLGLDGAVAVAGGEYHSLML 1269

Query: 178  KRRKTSSAREESENPASGDEFFT--LSPC-LVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
            +   T  A   + +   G+  FT  LSP  +V L+   ++  V AGG H++ L + G VW
Sbjct: 1270 RFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVELD---QVRTVRAGGYHSVALREDGTVW 1326

Query: 235  GWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
             WG+ G+GQLG G+   + VP P  +P L   AS                          
Sbjct: 1327 TWGHNGQGQLGDGTVTTRRVPAP--VPGLTAIAS-------------------------- 1358

Query: 294  IACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
            +  G  H+  V       T+ WG   +GQ G G ++D+L P+    L    V+ + AG  
Sbjct: 1359 VGAGTSHTFAVGSE----TWAWGRNSHGQLGTGDSSDRLEPTLVKGLHG--VKSVLAGGD 1412

Query: 352  HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
             +V    +G    +G N  G LG G+     VP  +  P
Sbjct: 1413 FSVAQGADGSAMSWGTNVHGTLGIGLPGQRTVPGAVTLP 1451


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 4/177 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGG+H+A+VT  G + ++G    G+ GHG  +D L P    +L +  +E +A G 
Sbjct: 317 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGE 376

Query: 351 WHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G     FG LG G + +  VPK +  P LE      +SCG  H+A
Sbjct: 377 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 435

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           V++  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + E 
Sbjct: 436 VVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAVVEV 492



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT ++S  GQ++ +G G  G LG G R K +  P  +  L        
Sbjct: 421 GIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDR-KSISLPREVESL-------- 471

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                         K  R+   + ACG  H+A V +             G L T+G G  
Sbjct: 472 --------------KGLRTV--QAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 515

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+  S+L++    Q+A G   T+  +  G VY  G   +GQLG    
Sbjct: 516 GRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQS 575

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
             + +P  +E  +  S   + ++CGA H AVLT   +V +WG    G+LG GD+ D+N+P
Sbjct: 576 DGK-LPARVEGKLSRSS-VEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLP 633

Query: 439 SLV-PIHGFLPRNIACG 454
           SLV  +     ++IACG
Sbjct: 634 SLVEALKDKQVKSIACG 650



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 49/272 (18%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  +A GG+H  +++  G+++ WG    G+LG G    ++  P LI  L +       
Sbjct: 315 LDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVL-HPQLIEALSN------- 366

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQ 329
                            + ++ +ACG  H+  VT +G L T+G G Y  G  GHG+    
Sbjct: 367 -----------------TNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 409

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P   +  ++ I V  I+ G WHT  +S  G+++ FG   FG LG G  ++ ++P+ +E
Sbjct: 410 WVPKRVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVE 469

Query: 389 TPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLGDSIDRN 436
           +  L+  R    +CG  H+A + E             G++ +WG    G+LG GD   + 
Sbjct: 470 S--LKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 527

Query: 437 IPSLVPIHGFLPRN---IACGWWHTLLLAETT 465
           +P+ V     +  N   +ACG  H+L +A TT
Sbjct: 528 VPTCVS--ALVEPNFCQVACG--HSLTIARTT 555



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 6/148 (4%)

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G   D L P    S + + V+ IA G  H   ++ +G ++ +G    G+LG GVD     
Sbjct: 298 GVKMDSLLPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLH 357

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPSLV 441
           P+L+E   L +   + V+CG  H+  +T  G + +WG   Y  G LG G+ +   +P  V
Sbjct: 358 PQLIEA--LSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 415

Query: 442 --PIHGFLPRNIACGWWHTLLLAETTQI 467
             P+ G    +I+CG WHT +++   Q+
Sbjct: 416 NGPLEGIHVSSISCGPWHTAVVSSAGQL 443



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 29/181 (16%)

Query: 231 GQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
           G+++ WG G +G+LG G +  K+VPT     C+    S    P                 
Sbjct: 505 GKLFTWGDGDKGRLGHGDKEAKLVPT-----CV----SALVEPNFC-------------- 541

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
              ++ACG   +   T +G + T G  +YGQ G+  ++ +L       L    VE+IA G
Sbjct: 542 ---QVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKLPARVEGKLSRSSVEEIACG 598

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            +H   ++ +  VY +G    G+LG G    +N+P L+E   L+ K+ K ++CG   +A 
Sbjct: 599 AYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEA--LKDKQVKSIACGTNFTAA 656

Query: 410 L 410
           +
Sbjct: 657 I 657


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAG 349
           + +I CG  HS  ++  G L  +G  L+GQ G G        P     L  I + QI+AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAG 199

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
             H++ +S+ G +Y +G N+FGQLG    ++++ P L+E   L++++ + ++CG  H+A+
Sbjct: 200 EAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKVEFLACGGSHTAL 257

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           LT+DG + ++G  K+GQLG   + +   P LV  + G     IACG WHTL
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTL 308



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 26/186 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    G+ + +++AG  H++ LS  G ++ WG    GQLGL             
Sbjct: 179 TTAPQIVEHLAGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGL------------- 225

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
              +H  S KD P L+               V+ +ACGG H+A++T  G L TFG G +G
Sbjct: 226 ---DHTES-KDSPSLIE--------ALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHG 273

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
           Q GH ST ++LRP   + L   +V QIA G WHT+  +S  G+V+ FG  + GQLG G  
Sbjct: 274 QLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGT 333

Query: 379 QAENVP 384
           + + +P
Sbjct: 334 RDQLIP 339



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 12/136 (8%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE---- 388
           + S L + ++ QI  G +H++ +S  G ++ +G N  GQLG G    +   P+++E    
Sbjct: 131 FESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAG 190

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
            P+ +      +S G  HS  L+  G + SWG N++GQLGL  +  ++ PSL+  +    
Sbjct: 191 IPLAQ------ISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQK 244

Query: 448 PRNIACGWWHTLLLAE 463
              +ACG  HT LL +
Sbjct: 245 VEFLACGGSHTALLTQ 260



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 17/100 (17%)

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
           ++++  +  G  H + +S +G+ + +       L                 IL+ K+   
Sbjct: 96  NMKIHSMDLGADHMLILSSDGKPFEYDNYSMKHLRF-------------ESILQEKKIIQ 142

Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           ++CG  HS  L++ G++ +WG N +GQLG+G    R  PS
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPS 178


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 124/267 (46%), Gaps = 36/267 (13%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P  +   P   + ++A G RHTL L+  GQV+  G     QLG       +PT   +P
Sbjct: 25  LLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLG-----HELPTKRPLP 79

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
             E  A                        V +IACG RHS  +T+ G +L++G    GQ
Sbjct: 80  IPELQA----------------------YVVIQIACGSRHSMALTEWGQILSWGDNDCGQ 117

Query: 321 CGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            GH + ND +  P     L+   V QIA G  H++ ++  G +Y +G N +GQL  GV  
Sbjct: 118 VGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQL--GVQS 175

Query: 380 AENVPK----LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
            +++P     L  T IL    A  ++CG  HS ++++   V  WG N  GQLGL D  +R
Sbjct: 176 PKDLPHSNAPLRLTTILGIPLA-TIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNR 234

Query: 436 NIPS-LVPIHGFLPRNIACGWWHTLLL 461
             PS L  +     R + CG  +++ L
Sbjct: 235 AYPSQLKSMRTLGVRFVTCGDEYSVFL 261



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 148/359 (41%), Gaps = 84/359 (23%)

Query: 33  PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
           P K P+  PIP  L      +  CG     AL  +E G++++WG  D     + T     
Sbjct: 73  PTKRPL--PIP-ELQAYVVIQIACGSRHSMAL--TEWGQILSWGDNDCGQVGHSTDNDVI 127

Query: 93  ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
           E P+        +VV+ A G  H +++T  GE+Y+WG          +  +G  G     
Sbjct: 128 ELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWG----------SNIYGQLGV---- 173

Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
                      Q+P                       + P S       +P  +T   G+
Sbjct: 174 -----------QSP----------------------KDLPHSN------APLRLTTILGI 194

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            +  +A GG H+ ++S    V+GWG    GQLGL                      ++R 
Sbjct: 195 PLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDE-------------------QNRA 235

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
              +  S+ + G      V+ + CG  +S  +T+ G + T G G YGQ GHG++N+++ P
Sbjct: 236 YPSQLKSMRTLG------VRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIP 289

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVE-GRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
                LM   + Q+A G  HT+ +    GRVY FG    GQLGT    ++ +PK++  P
Sbjct: 290 RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIGP 348



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 42/264 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
           + ++A G RH++ L++ GQ+  WG    GQ+G  +   ++  P ++  L        A G
Sbjct: 88  VIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACG 147

Query: 269 KDRPL-------LVRQGSVNSSGKAGRSYVKE--------------------IACGGRHS 301
            +  L       L   GS N  G+ G    K+                    IACGG HS
Sbjct: 148 NNHSLALTSCGELYSWGS-NIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHS 206

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAAGLWHTVCISV 358
            +++ + A+  FGWG    CG    ND+   +Y S L  ++   V  +  G  ++V ++ 
Sbjct: 207 FLISKSSAV--FGWG-KNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTN 263

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVL 417
           EG V+  G   +GQLG G    E +P+++    L       V+CG RH+ A++   G+V 
Sbjct: 264 EGGVFTCGAGNYGQLGHGASNNEMIPRMVIE--LMGSTITQVACGNRHTLALVPSGGRVY 321

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLV 441
           S+G    GQLG  ++I + +P +V
Sbjct: 322 SFGLGASGQLGTRNTISQTLPKVV 345



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 9/182 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++IACG RH+  +T  G +   G   + Q GH       RP     L    V QIA G 
Sbjct: 38  VQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTK--RPLPIPELQAYVVIQIACGS 95

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ ++  G++  +G N  GQ+G   D     +PK+L    L S+    ++CG  HS  
Sbjct: 96  RHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILR--FLVSRTVVQIACGNNHSLA 153

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSID---RNIP-SLVPIHGFLPRNIACGWWHTLLLAETT 465
           LT  G++ SWG N YGQLG+    D    N P  L  I G     IACG  H+ L+++++
Sbjct: 154 LTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSS 213

Query: 466 QI 467
            +
Sbjct: 214 AV 215



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 12/159 (7%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           AL  +G   +GQ G G   ++  L PS      D  V+QIA G  HT+ ++  G+VY  G
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N   QLG  +     +P     P L++     ++CG+RHS  LTE GQ+LSWG N  GQ
Sbjct: 62  NNDHHQLGHELPTKRPLP----IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQ 117

Query: 427 LGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLL 461
             +G S D ++  L  I  FL       IACG  H+L L
Sbjct: 118 --VGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLAL 154



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 97/246 (39%), Gaps = 47/246 (19%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWAH 115
           G   +LA +  G+L +WGS +  GQ  + S K   H   P          +   A G  H
Sbjct: 147 GNNHSLALTSCGELYSWGS-NIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNH 205

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
              ++++  V+ WG   C          G  G   + +    S L       S +  G  
Sbjct: 206 SFLISKSSAVFGWGKNTC----------GQLGLNDEQNRAYPSQLK------SMRTLGVR 249

Query: 176 VVKRRKTSSAREESE---------------NPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
            V      S    +E               + AS +E   + P +V    G  IT+VA G
Sbjct: 250 FVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNE---MIPRMVIELMGSTITQVACG 306

Query: 221 GRHTLILSDM-GQVWGWGYGGEGQLGLGSRI-----KMVPTPHLIP---CLEHAASGKDR 271
            RHTL L    G+V+ +G G  GQLG  + I     K+V  P + P    L  ++ G D+
Sbjct: 307 NRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIGPWVSPNGSALMESSEGADK 366

Query: 272 PLLVRQ 277
            +++R+
Sbjct: 367 SVVIRK 372


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 124/267 (46%), Gaps = 36/267 (13%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P  +   P   + ++A G RHTL L+  GQV+  G     QLG       +PT   +P
Sbjct: 25  LLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLG-----HELPTKRPLP 79

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
             E  A                        V +IACG RHS  +T+ G +L++G    GQ
Sbjct: 80  IPELQA----------------------YVVIQIACGSRHSMALTEWGQILSWGDNDCGQ 117

Query: 321 CGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            GH + ND +  P     L+   V QIA G  H++ ++  G +Y +G N +GQL  GV  
Sbjct: 118 VGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQL--GVQS 175

Query: 380 AENVPK----LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
            +++P     L  T IL    A  ++CG  HS ++++   V  WG N  GQLGL D  +R
Sbjct: 176 PKDLPHSNAPLRLTTILGIPLA-TIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNR 234

Query: 436 NIPS-LVPIHGFLPRNIACGWWHTLLL 461
             PS L  +     R + CG  +++ L
Sbjct: 235 AYPSQLKSMRTLGVRFVTCGDEYSVFL 261



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 147/359 (40%), Gaps = 84/359 (23%)

Query: 33  PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
           P K P+  PIP  L      +  CG     AL  +E G++++WG  D     + T     
Sbjct: 73  PTKRPL--PIP-ELQAYVVIQIACGSRHSMAL--TEWGQILSWGDNDCGQVGHSTDNDVI 127

Query: 93  ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
           E P+        +VV+ A G  H +++T  GE+Y+WG          +  +G  G     
Sbjct: 128 ELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWG----------SNIYGQLGV---- 173

Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
                      Q+P                       + P S       +P  +T   G+
Sbjct: 174 -----------QSP----------------------KDLPHSN------APLRLTTILGI 194

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            +  +A GG H+ ++S    V+GWG    GQLGL                      ++R 
Sbjct: 195 PLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDE-------------------QNRA 235

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
              +  S+ + G      V+ + CG  +S  +T+ G + T G G YGQ GHG +N+++ P
Sbjct: 236 YPSQLKSMRTLG------VRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIP 289

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVE-GRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
                LM   + Q+A G  HT+ +    GRVY FG    GQLGT    ++ +PK++  P
Sbjct: 290 RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIGP 348



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 42/264 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
           + ++A G RH++ L++ GQ+  WG    GQ+G  +   ++  P ++  L        A G
Sbjct: 88  VIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACG 147

Query: 269 KDRPL-------LVRQGSVNSSGKAGRSYVKE--------------------IACGGRHS 301
            +  L       L   GS N  G+ G    K+                    IACGG HS
Sbjct: 148 NNHSLALTSCGELYSWGS-NIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHS 206

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAAGLWHTVCISV 358
            +++ + A+  FGWG    CG    ND+   +Y S L  ++   V  +  G  ++V ++ 
Sbjct: 207 FLISKSSAV--FGWG-KNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTN 263

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVL 417
           EG V+  G   +GQLG GV   E +P+++    L       V+CG RH+ A++   G+V 
Sbjct: 264 EGGVFTCGAGNYGQLGHGVSNNEMIPRMVIE--LMGSTITQVACGNRHTLALVPSGGRVY 321

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLV 441
           S+G    GQLG  ++I + +P +V
Sbjct: 322 SFGLGASGQLGTRNTISQTLPKVV 345



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 9/182 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++IACG RH+  +T  G +   G   + Q GH       RP     L    V QIA G 
Sbjct: 38  VQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTK--RPLPIPELQAYVVIQIACGS 95

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ ++  G++  +G N  GQ+G   D     +PK+L    L S+    ++CG  HS  
Sbjct: 96  RHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILR--FLVSRTVVQIACGNNHSLA 153

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSID---RNIP-SLVPIHGFLPRNIACGWWHTLLLAETT 465
           LT  G++ SWG N YGQLG+    D    N P  L  I G     IACG  H+ L+++++
Sbjct: 154 LTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSS 213

Query: 466 QI 467
            +
Sbjct: 214 AV 215



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 12/159 (7%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           AL  +G   +GQ G G   ++  L PS      D  V+QIA G  HT+ ++  G+VY  G
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N   QLG  +     +P     P L++     ++CG+RHS  LTE GQ+LSWG N  GQ
Sbjct: 62  NNDHHQLGHELPTKRPLP----IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQ 117

Query: 427 LGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLL 461
             +G S D ++  L  I  FL       IACG  H+L L
Sbjct: 118 --VGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLAL 154



 Score = 42.0 bits (97), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 97/258 (37%), Gaps = 71/258 (27%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWAH 115
           G   +LA +  G+L +WGS +  GQ  + S K   H   P          +   A G  H
Sbjct: 147 GNNHSLALTSCGELYSWGS-NIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNH 205

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
              ++++  V+ WG   C                       Q  L  EQ      RA   
Sbjct: 206 SFLISKSSAVFGWGKNTC----------------------GQLGLNDEQ-----NRAYPS 238

Query: 176 VVKRRKTSSAREESENPASGDEF----------FT-----------------LSPCLVTL 208
            +K  +T   R  +     GDE+          FT                 + P +V  
Sbjct: 239 QLKSMRTLGVRFVT----CGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMVIE 294

Query: 209 NPGVKITKVAAGGRHTLILSDM-GQVWGWGYGGEGQLGLGSRI-----KMVPTPHLIP-- 260
             G  IT+VA G RHTL L    G+V+ +G G  GQLG  + I     K+V  P + P  
Sbjct: 295 LMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIGPWVSPSG 354

Query: 261 -CLEHAASGKDRPLLVRQ 277
             L  ++ G D+ +++R+
Sbjct: 355 SALMESSEGADKSVVIRK 372


>gi|354505309|ref|XP_003514713.1| PREDICTED: protein RCC2-like [Cricetulus griseus]
          Length = 484

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H A  
Sbjct: 109 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEALSHEA-- 165

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +TD G++  FG    GQ G G+  D
Sbjct: 166 ----------------------IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTD 203

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 204 AV-PSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 262

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 263 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHVACGANHTLVLDSQKRVFSWGFGGYG 322

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 323 RLGHAEQKDEMVPRLVKLFDF 343



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 103/259 (39%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L+D G V+ +G    GQLG
Sbjct: 138 RNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLG 197

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 198 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMLMD 232

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 233 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 292

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
               +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 293 VFLHVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIY 352

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 353 AGYTCSFAVSEVGGLFFWG 371



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 91/420 (21%), Positives = 161/420 (38%), Gaps = 78/420 (18%)

Query: 53  KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           + V  G C   +L  +  GKL +WG  +++GQ      K  E P      +  ++V AA 
Sbjct: 113 RTVVSGSCAAHSLLITTEGKLWSWGR-NEKGQLGHGDTKRVEAPRLIEALSHEAIVLAAC 171

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS-ALPTEQAPPSDK 170
           G  H +++T+ G V+ +G              G  G       G Q+ A+P+   P    
Sbjct: 172 GRNHTLALTDTGSVFAFG----------ENKMGQLG------LGNQTDAVPS---PAQIM 212

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
             G+ + K              A G EF  L  C                          
Sbjct: 213 YNGQPITKM-------------ACGAEFSMLMDC-------------------------K 234

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G ++ +G    GQLG  S  K +     I   +     +   + + +             
Sbjct: 235 GNLYSFGCPEYGQLGHNSDGKFIARAQRIE-YDCELVPRRVAIFIEKTKDGQILPVPNVV 293

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIA 347
              +ACG  H+ V+     + ++G+G YG+ GH    D++ P     L D       QI 
Sbjct: 294 FLHVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGATQIY 352

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
           AG   +  +S  G ++ +G     +      ++   PK ++   L   R + ++CG + S
Sbjct: 353 AGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQD--LCGWRIRSLACG-KSS 403

Query: 408 AVLTEDGQVLSWGWN-KYGQLGLGDSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLAE 463
            ++  D   +SWG +  +G+LG GD   ++  +   +  + G     +A G+ H+L++A 
Sbjct: 404 IIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIAR 463


>gi|332030031|gb|EGI69856.1| X-linked retinitis pigmentosa GTPase regulator-like protein
            [Acromyrmex echinatior]
          Length = 2956

 Score =  107 bits (268), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 30/209 (14%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            +++  V+ G  HTL +++ G ++ WG    GQLGLG ++    +P L+  L         
Sbjct: 1945 IEVFSVSCGHCHTLAVTNNG-IYAWGASQFGQLGLG-KVLQCSSPELVTSL--------- 1993

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                            +  + +   G  HS  +T  G + T+GWG++GQ GHG+T+++  
Sbjct: 1994 ---------------AQEIIVDAVAGQYHSVALTADGRIFTWGWGVHGQLGHGNTDEKAI 2038

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            PS   +L+ I V  I+AG  HT+ +S++G +Y FG N  GQLGTG +   +VP  +  P 
Sbjct: 2039 PSLVKALLGIVVCCISAGYAHTLALSIDGVLYAFGCNILGQLGTGDNIKSSVPIKVSLP- 2097

Query: 392  LESKRAKVVSCGARHSAVLTEDGQVLSWG 420
                R  ++S G  H+  ++   ++  WG
Sbjct: 2098 ---DRITLISTGYFHNLAVSNTNKLYIWG 2123



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 37/267 (13%)

Query: 206  VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
            +T++   K   ++ G  H  ++ + G ++ WG   +G LG GS +    TPH I C    
Sbjct: 1885 MTMHVDFKRRSLSTGFSHVALVRN-GNIYTWGSSVQGCLGTGSSVLRYGTPHAI-CF--- 1939

Query: 266  ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGH 323
                               K+ +  V  ++CG  H+  VT+ G    + WG   +GQ G 
Sbjct: 1940 ------------------FKSMKIEVFSVSCGHCHTLAVTNNG---IYAWGASQFGQLGL 1978

Query: 324  GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            G       P   +SL    +    AG +H+V ++ +GR++ +G    GQLG G    + +
Sbjct: 1979 GKVLQCSSPELVTSLAQEIIVDAVAGQYHSVALTADGRIFTWGWGVHGQLGHGNTDEKAI 2038

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P L++   L       +S G  H+  L+ DG + ++G N  GQLG GD    NI S VPI
Sbjct: 2039 PSLVKA--LLGIVVCCISAGYAHTLALSIDGVLYAFGCNILGQLGTGD----NIKSSVPI 2092

Query: 444  HGFLPRN---IACGWWHTLLLAETTQI 467
               LP     I+ G++H L ++ T ++
Sbjct: 2093 KVSLPDRITLISTGYFHNLAVSNTNKL 2119



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 97/424 (22%), Positives = 157/424 (37%), Gaps = 76/424 (17%)

Query: 22   VYMWGY-LPGTSPEKSPILS-PIPARLCGGDSWK-DVCGGGCGF--ALATSESGKLITWG 76
            +Y WG  + G     S +L    P  +C   S K +V    CG    LA + +G +  WG
Sbjct: 1911 IYTWGSSVQGCLGTGSSVLRYGTPHAICFFKSMKIEVFSVSCGHCHTLAVTNNG-IYAWG 1969

Query: 77   SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
             A   GQ  L       +PE      +  +V A AG  H V++T  G ++TWGW      
Sbjct: 1970 -ASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYHSVALTADGRIFTWGW------ 2022

Query: 137  AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE------ 190
                   G  G     +T        E+A PS  +A   +V    ++             
Sbjct: 2023 -------GVHGQLGHGNT-------DEKAIPSLVKALLGIVVCCISAGYAHTLALSIDGV 2068

Query: 191  ----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG- 239
                         +GD   +  P  V+L    +IT ++ G  H L +S+  +++ WG   
Sbjct: 2069 LYAFGCNILGQLGTGDNIKSSVPIKVSLPD--RITLISTGYFHNLAVSNTNKLYIWGASP 2126

Query: 240  ---------------GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
                            E Q     R K +     IP      +GK +  L ++  V +  
Sbjct: 2127 QVLRLQAQAQKKIRISEQQDANEKRNKALGELEKIPSDATNLNGKIKEFLNKKDGVQT-- 2184

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA-SSLMDIQV 343
            K+  +   +I    +     T    L  F + L  +     +   L+P    +SL+  Q+
Sbjct: 2185 KSSHTETSDIETQKKFE---TKNAHLKDFNFDLIEE-----SQTHLKPCIVDTSLVKGQI 2236

Query: 344  EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
             QI+ G  H   I+ +G +Y +G N  GQ+G G  +   +P    TP+  +         
Sbjct: 2237 NQISVGCHHNALITKDGSLYTWGRNLDGQIGNGTRREVLIP----TPLYYNSACIFAQIP 2292

Query: 404  ARHS 407
             RH+
Sbjct: 2293 PRHN 2296



 Score = 38.9 bits (89), Expect = 5.7,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
            P +++T +++ +  ++ S G  H+A++T+DG + +WG N  GQ+G G   +  IP+
Sbjct: 2224 PCIVDTSLVKGQINQI-SVGCHHNALITKDGSLYTWGRNLDGQIGNGTRREVLIPT 2278


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 30/272 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G +  T  P L+       + ++A G RH++ LS+ GQV  WG    GQLG  +   +V 
Sbjct: 73  GHDLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQ 132

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            P ++           R L+ +              V +IACG  HS  +T  G L ++G
Sbjct: 133 LPKIV-----------RQLVSKT-------------VVQIACGNNHSLALTSCGELYSWG 168

Query: 315 WGLYGQCGHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
             +YGQ G  +  +     +P   ++L+ I V  IA G  H+  IS    V+ +G N  G
Sbjct: 169 SNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCG 228

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG   + + + P  L+T  L +   + V+CG   S  LT +G V + G   YGQLG G 
Sbjct: 229 QLGLNDETSRSYPTQLKT--LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF 286

Query: 432 SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
             +  +P +V  + G     +ACG  HTL L 
Sbjct: 287 GANEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 114/242 (47%), Gaps = 34/242 (14%)

Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           +++ WG    GQLGLG    + + TP  +P    +A                        
Sbjct: 6   ELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSA------------------------ 41

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +K++ACG RH+  +T +G +   G   + Q GH       RP     L+D  V QIA G 
Sbjct: 42  IKQVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPTK--RPLLIPELLDYVVVQIACGS 99

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +S  G+V  +G N  GQLG   DQ    +PK++    L SK    ++CG  HS  
Sbjct: 100 RHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQ--LVSKTVVQIACGNNHSLA 157

Query: 410 LTEDGQVLSWGWNKYGQLGLG---DSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLAETT 465
           LT  G++ SWG N YGQLG+    +    N P  L  + G     IACG  H+ ++++++
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSS 217

Query: 466 QI 467
            +
Sbjct: 218 AV 219



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 156/386 (40%), Gaps = 60/386 (15%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
           E   IL+P         + K V  G       TS SG++   GS D    S L      +
Sbjct: 24  EDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTS-SGRVYACGSND---HSQLGHDLPTK 79

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC-----------VPSAKVTRD 142
            P   P   +  VV+ A G  H ++++E G+V +WG  +C           V   K+ R 
Sbjct: 80  RPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQ 139

Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
             S    Q       S   T          G  +  +   ++ +E + +           
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELYS--WGSNIYGQLGVNTPKEVTHSN---------Q 188

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  +T   G+ +  +A GG H+ I+S    V+GWG    GQLGL                
Sbjct: 189 PVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDE------------- 235

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
               + +  P  ++  ++ + G      V+ +ACG   S  +T+ G + T G G YGQ G
Sbjct: 236 ----TSRSYPTQLK--TLRTLG------VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG 283

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAE 381
           HG   +++ P     LM   + Q+A G  HT+  +   GRVY FG    GQLGT   ++ 
Sbjct: 284 HGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRSTKSL 343

Query: 382 NVPKLLETP--------ILESKRAKV 399
            +P+++  P        +L+S  AKV
Sbjct: 344 TLPQVVIGPWVSPSGSALLQSSDAKV 369


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 142/363 (39%), Gaps = 85/363 (23%)

Query: 71  KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
            L TWG +D  GQ+     ++   PEP        VV AA G  +   VT  GE+YT G 
Sbjct: 38  SLYTWGRSD-LGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGS 96

Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
            +        R  G                                VK R+ +       
Sbjct: 97  NDA-------RQLG--------------------------------VKGREVA------- 110

Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
                     L P  V+      +  VA G  H L + D G +  WG    GQLG G   
Sbjct: 111 ----------LEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVG 160

Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
                P ++  +  A                        +   +A G  HS  +T +G +
Sbjct: 161 ASAAQPRVLKRIRGA------------------------HFARVAAGATHSLALTSSGQV 196

Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +FG G +G  GHG  N++ +P+   +L    +  IAAG + +  +S+ GRV+ +G N++
Sbjct: 197 YSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKY 256

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           GQLG G    E     L  P+   ++A  V+CG  H   LT  G+V +WG +  GQLG G
Sbjct: 257 GQLGNG----EFGNAFLPQPVPGIEQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQG 312

Query: 431 DSI 433
            ++
Sbjct: 313 SNL 315



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 111/259 (42%), Gaps = 35/259 (13%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGK-DRPLLVRQGSVNSSGK- 285
           ++ WG    GQ G G R +    P  +  L+     HAA G  +   + R G + ++G  
Sbjct: 39  LYTWGRSDLGQTGSG-RDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSN 97

Query: 286 -------AGRSYVKE--------------IACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
                   GR    E              +ACG  H   V D G L  +G   YGQ G G
Sbjct: 98  DARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTG 157

Query: 325 STN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
                  +P     +      ++AAG  H++ ++  G+VY FG   FG LG G       
Sbjct: 158 EVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAK 217

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP- 442
           P L++   L  +    ++ G   SA ++  G+V +WG NKYGQLG G+  +  +P  VP 
Sbjct: 218 PTLVQA--LWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLPQPVPG 275

Query: 443 IHGFLPRNIACGWWHTLLL 461
           I   +   +ACG  H + L
Sbjct: 276 IEQAV--QVACGDHHCIAL 292



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 82/201 (40%), Gaps = 53/201 (26%)

Query: 62  FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
           F+ A S SG++ TWG  +  GQ  L +G+ G    P P+P     V+ A G  HC+++T 
Sbjct: 238 FSAAVSLSGRVFTWGR-NKYGQ--LGNGEFGNAFLPQPVPGIEQAVQVACGDHHCIALTR 294

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
            GEVYTWG               S+G   + S     AL      PS            +
Sbjct: 295 WGEVYTWGLH-------------SSGQLGQGSNLGSEALNGCLCSPS------------R 329

Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
             S  ++S                        I +V+AG RH+  +S   Q+WG G   E
Sbjct: 330 VDSLADQS------------------------IRQVSAGARHSFFVSPGEQLWGAGANDE 365

Query: 242 GQLGLGSRIKMVPTPHLIPCL 262
           GQL L S +  V  P  +P L
Sbjct: 366 GQLALQS-VPSVALPTRVPGL 385


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 34/248 (13%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +++VA G RHT+ L+  GQV+ WG    GQLGLG +   + +P  +  L    SG   
Sbjct: 117 IPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSL----SGM-- 170

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQ 329
           PL+                  +++ GG HS  ++ +G++  FGWG    GQ G G + D+
Sbjct: 171 PLV------------------QVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDSQDR 210

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
             P+   SL   +   I+ G  HT  ++  G V+ FG  QFGQLG    + E  P+L+  
Sbjct: 211 CTPTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAE 270

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
             L   +   ++CG  H+ VL E+ ++ S+G N   QLG  +    + PS VP+   LP+
Sbjct: 271 --LWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRSND---SHPS-VPLPVLLPQ 324

Query: 450 NIACGWWH 457
              C   +
Sbjct: 325 VYKCSLLY 332



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 27/184 (14%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIP 260
           SP  V    G+ + +V+AGG H+  LS  G V+GWG    GQLGLG S+ +  PT     
Sbjct: 160 SPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPT----- 214

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                             SV+S      +    I+CG  H+A++T  G + TFG G +GQ
Sbjct: 215 ------------------SVDSLNLKKTT---SISCGKDHTAILTKHGTVFTFGSGQFGQ 253

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GH S+ ++LRP   + L   +V +IA G +HT+ +    ++Y FG N   QLG   D  
Sbjct: 254 LGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRSNDSH 313

Query: 381 ENVP 384
            +VP
Sbjct: 314 PSVP 317



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 97/179 (54%), Gaps = 4/179 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAG 349
           V ++ACG RH+  +T  G + T+G    GQ G G     +  P    SL  + + Q++AG
Sbjct: 119 VSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAG 178

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
             H+  +SV G V+ +G N  GQLG G  Q    P  +++  L  K+   +SCG  H+A+
Sbjct: 179 GDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDS--LNLKKTTSISCGKDHTAI 236

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           LT+ G V ++G  ++GQLG   S +   P LV  + G     IACG +HTL+L E  +I
Sbjct: 237 LTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENNKI 295



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 71/138 (51%), Gaps = 12/138 (8%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-----VDQAENVPKL 386
           P    +   I V Q+A G  HTV ++ EG+VY +G N  GQLG G     +   + V  L
Sbjct: 108 PRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSL 167

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHG 445
              P+++      VS G  HS  L+  G V  WG N  GQLGLGDS DR  P+ V  ++ 
Sbjct: 168 SGMPLVQ------VSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNL 221

Query: 446 FLPRNIACGWWHTLLLAE 463
               +I+CG  HT +L +
Sbjct: 222 KKTTSISCGKDHTAILTK 239



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 45/254 (17%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEASVVKAAAGWAH 115
           G    +A ++ G++ TWG  +  GQ  L  GK G    +P+     +   +V+ +AG  H
Sbjct: 125 GSRHTVALTKEGQVYTWGQ-NSRGQ--LGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDH 181

Query: 116 CVSVTEAGEVYTWGWREC------------VPSAKVTRDFGSAGSFQKDSTGK-QSALPT 162
             +++ +G V+ WG  +C             P++  + +     S    S GK  +A+ T
Sbjct: 182 SFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSI---SCGKDHTAILT 238

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
           +        +G+    +   +S+R E            L P LV    G K+T++A G  
Sbjct: 239 KHGTVFTFGSGQ--FGQLGHNSSRNE------------LRPRLVAELWGAKVTRIACGRY 284

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRPLLVR--QGS 279
           HTL+L +  +++ +G   + QLG  +     VP P L+P +   +      LL R  Q +
Sbjct: 285 HTLVLQENNKIYSFGCNDQNQLGRSNDSHPSVPLPVLLPQVYKCS------LLYREIQRT 338

Query: 280 VNSSGKAGRSYVKE 293
            +S+    RS++++
Sbjct: 339 FSSASCLNRSFLEK 352


>gi|328783019|ref|XP_395630.4| PREDICTED: hypothetical protein LOC412167, partial [Apis mellifera]
          Length = 854

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 126/265 (47%), Gaps = 48/265 (18%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV--PTPHLIPCLEHAASG 268
           G KI ++ AG  H+L L+  G V+ WG   EGQLGL     +V  PT   IP        
Sbjct: 207 GSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIP-------- 258

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
              P                  VK I  G  HS  +T+ G +   G    G+ G      
Sbjct: 259 --EP------------------VKRINTGYYHSIFLTENGLVYVCGESESGKLG------ 292

Query: 329 QLRPSYASSLMDIQVE------QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE- 381
            +  ++++ +M  Q++       +A G  HT+ ++    +Y  G N  GQLG G +  E 
Sbjct: 293 -IDINFSTQIMPKQMQLPNPVIYVACGGHHTMFLTENNNLYCTGSNSSGQLGLGTNVTEL 351

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           + PKLL    L+++R   +SCG  H+A+LTE G++ + G  ++G+LGL ++ + N+  L 
Sbjct: 352 HTPKLLSQGALKNERISRISCGESHTAILTESGKLYTCGDGRHGKLGLEEN-ENNVHELT 410

Query: 442 PIHGF---LPRNIACGWWHTLLLAE 463
            +  +      NI+CG  HT+L+ +
Sbjct: 411 FVQRYKQLFISNISCGGCHTILIGQ 435



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 94/189 (49%), Gaps = 21/189 (11%)

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
           R  V  I+CG  HSAV+  +G L  FG   +GQ G G  N   +PS    L   +V  +A
Sbjct: 98  RDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVA 157

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE-------SKRAKVV 400
            G  HT+  +V  +++  G +Q GQLG G+     +     TP+L        SK  ++V
Sbjct: 158 CGRAHTLICTVAEKIFACGSDQEGQLGRGISA---IGDSTSTPVLIYDSGPTGSKIVQIV 214

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLP---RNIACGW 455
           + G+ HS  LT DG V +WG N  GQLGL D     I  LV  P    +P   + I  G+
Sbjct: 215 A-GSHHSLALTSDGNVFAWGSNLEGQLGLPD-----ISGLVNKPTKVHIPEPVKRINTGY 268

Query: 456 WHTLLLAET 464
           +H++ L E 
Sbjct: 269 YHSIFLTEN 277


>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 401

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 136/307 (44%), Gaps = 58/307 (18%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-------------IKMVPTPHL 258
            K T +AAG  H+  +S+ G+V+ WG   +GQLGLG R             +K      L
Sbjct: 96  AKFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFRIQAL 155

Query: 259 IPCLEHAASGKDRPLLV----------------RQGSVNSSGKAGRSY------------ 290
               EH+ +  +   ++                R  S+ S  +    Y            
Sbjct: 156 ALGAEHSLALSEEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVK 215

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V ++A G  HSA + + G+L TFG G   Q G G   D   P     +    VE+IA G 
Sbjct: 216 VSKVAAGLTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRVPVIPP--VEEIACGG 273

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQ--AENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  IS  G++Y++G N++G LG G     A ++P L+E   LES R   V CG +H+ 
Sbjct: 274 YHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGA-LESLRVTQVQCGWKHTM 332

Query: 409 VLTEDGQVLSWGW------------NKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWW 456
            LT DG V +WGW            +  GQLGLG+  D   P+ V         I+CG+ 
Sbjct: 333 ALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLGNENDFLEPTQVKSKNMKAIQISCGFN 392

Query: 457 HTLLLAE 463
           H+  + E
Sbjct: 393 HSGAILE 399



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 145/323 (44%), Gaps = 67/323 (20%)

Query: 193 ASGDEFFTLSPC--LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
           ASG+ F+  + C  +  L P      +A GG HTL+L++ G+V+  G    GQLGL    
Sbjct: 25  ASGESFWEPTVCKSMQHLQP----IALACGGAHTLVLTEEGRVYASGLNDWGQLGL---- 76

Query: 251 KMVPTPHLIPCLE-----------HAASGKDRPLLVRQ-GSV-----NSSGKAGRS---- 289
             + T H +  LE           H A+G      + + G V     N+ G+ G      
Sbjct: 77  -PLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGLGKRGK 135

Query: 290 ---------------YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS--------- 325
                           ++ +A G  HS  +++ G +L++G  L G+ GHG          
Sbjct: 136 GKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGEGHRSSSMFS 195

Query: 326 ---TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
               + +  P       D++V ++AAGL H+ C+  +G ++ FG  +  QLG G D+  +
Sbjct: 196 IFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQLGLGGDRDIS 255

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR--NIPSL 440
            PK    P++     + ++CG  H+  ++ +GQ+  WG N+YG LG G       ++P L
Sbjct: 256 EPK--RVPVIPP--VEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPML 311

Query: 441 V--PIHGFLPRNIACGWWHTLLL 461
           V   +       + CGW HT+ L
Sbjct: 312 VEGALESLRVTQVQCGWKHTMAL 334



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 160/390 (41%), Gaps = 68/390 (17%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAG 112
            CGG     L  +E G++   G  +D GQ  L  ++G   E  E   LP EA     AAG
Sbjct: 48  ACGGA--HTLVLTEEGRVYASG-LNDWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAG 104

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ-----KDSTGKQSALPTEQAPP 167
             H  +++E G VY WG           R  G   + Q     KD   +  AL  E +  
Sbjct: 105 DFHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLA 164

Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTL-------SPCLVTLNPGVKITKVAAG 220
             +    EV+    + + R            F++       +P LV     VK++KVAAG
Sbjct: 165 LSEEG--EVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAG 222

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
             H+  L + G ++ +G G E QLGLG   + +  P  +P +                  
Sbjct: 223 LTHSACLDEQGSLFTFGKGRECQLGLGGD-RDISEPKRVPVI------------------ 263

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ---LRPSYASS 337
                     V+EIACGG H+  ++  G L  +G   YG  G G  +     L      +
Sbjct: 264 --------PPVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGA 315

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYV--FGGNQ----------FGQLGTGVDQAENVPK 385
           L  ++V Q+  G  HT+ ++V+G V+   +GG+Q           GQLG G     N   
Sbjct: 316 LESLRVTQVQCGWKHTMALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLG-----NEND 370

Query: 386 LLETPILESKRAKV--VSCGARHSAVLTED 413
            LE   ++SK  K   +SCG  HS  + E+
Sbjct: 371 FLEPTQVKSKNMKAIQISCGFNHSGAILEE 400



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 3/158 (1%)

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G G YG+ G  S      P+   S+  +Q   +A G  HT+ ++ EGRVY  G N +GQ
Sbjct: 14  WGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYASGLNDWGQ 73

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG  +    ++  L    + +  +   ++ G  HSA ++EDG+V  WG N  GQLGLG  
Sbjct: 74  LGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGLGKR 133

Query: 433 IDRNIPS---LVPIHGFLPRNIACGWWHTLLLAETTQI 467
               + +   +  +  F  + +A G  H+L L+E  ++
Sbjct: 134 GKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEV 171



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 19/105 (18%)

Query: 31  TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
           + P++ P++ P+    CGG               A S +G+L  WGS +      L  G 
Sbjct: 255 SEPKRVPVIPPVEEIACGGYH-----------TGAISRNGQLYMWGSNE---YGCLGFGY 300

Query: 91  HGETPEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGEVYTWGW 130
             +     P+  E +     V +   GW H +++T  G+V+ WGW
Sbjct: 301 KHQNATSLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGW 345


>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
           leucogenys]
          Length = 814

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 135/293 (46%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  +    +   P   S + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E   PK++E   +  +    +SCG  H+A++T+
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSDPKVIEN--IRDQTISYISCGESHTALITD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  +  IP+L      F+ + +ACG  H ++ A
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACGGCHMVVFA 365



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   ++     E K  K +S G+  SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVTNVCVPQQVTI-GKPVSWISCGYYHSAFVT 206



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 132/281 (46%), Gaps = 42/281 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ +++   +++ +G    GQLGLGS+   V  P  +  L     + AA G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                     +K+++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  +  +   P   +  +   V  I+ G +H+  ++ +G +YVFG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVTNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 368 NQFGQLGTGVDQAEN--VPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            + G+LG       N   P+L+ E P    ++   V+CG  H+ VLTE+  V ++G  ++
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIP----EKVIQVACGGEHTVVLTENA-VYTFGLGQF 271

Query: 425 GQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           GQLGLG  + + + P ++  I       I+CG  HT L+ +
Sbjct: 272 GQLGLGTFLFETSDPKVIENIRDQTISYISCGESHTALITD 312



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 28/162 (17%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P LV+  P  K+ +VA GG HT++L++   V+ +G G  GQLGLG+ +     P +I  
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSDPKVIEN 291

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           +      +D+ +               SY   I+CG  H+A++TD G + TFG G +G+ 
Sbjct: 292 I------RDQTI---------------SY---ISCGESHTALITDIGLMYTFGDGRHGKL 327

Query: 322 GHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           G G  N  +   P+  S+     V+ +A G  H V  +   R
Sbjct: 328 GLGLENFTNHFIPTLCSNFSRFIVKLVACGGCHMVVFAAPRR 369



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 23/106 (21%)

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           F T  P ++       I+ ++ G  HT +++D+G ++ +G G  G+LGLG       T H
Sbjct: 281 FETSDPKVIENIRDQTISYISCGESHTALITDIGLMYTFGDGRHGKLGLGLE---NFTNH 337

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
            IP L                         R  VK +ACGG H  V
Sbjct: 338 FIPTL--------------------CSNFSRFIVKLVACGGCHMVV 363


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 97/178 (54%), Gaps = 4/178 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++I+CG RH A+ T  G + T+G  L G+ GHG+  D  RP    SL    VE IA G 
Sbjct: 256 VQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGE 315

Query: 351 WHTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  ++  G +Y +G   +  G LG G+  +  +PK +  P LE  +   V+CG+ HSA
Sbjct: 316 FHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGP-LEGLQVLSVACGSWHSA 374

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
           +    G+V ++G   +G LG G+  +   P  V  + GF    +ACG WH+  + ETT
Sbjct: 375 LAMSSGKVFTFGDGTFGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAAIVETT 432



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 119/272 (43%), Gaps = 45/272 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + + +++ G RH  + +  G+V+ WG    G+LG G+   +                  R
Sbjct: 254 LDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDI-----------------SR 296

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQ 329
           P LV   +V        S V+ IACG  H+  VT +G L  +G G Y  G  GHG     
Sbjct: 297 PKLVESLAV--------SNVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASH 348

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P   S  ++ +QV  +A G WH+      G+V+ FG   FG LG G    ENV    E
Sbjct: 349 WLPKRVSGPLEGLQVLSVACGSWHSALAMSSGKVFTFGDGTFGALGHG--NRENVAYPKE 406

Query: 389 TPILESKRAKVVSCGARHSAVLTE----------DGQVLSWGWNKYGQLGLGDSIDRNIP 438
              L   R   V+CG  HSA + E            ++ +WG     +LG GD   R +P
Sbjct: 407 VESLSGFRTMKVACGVWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVP 466

Query: 439 SLVPIHGFLPRN---IACGWWHTLLLAETTQI 467
           ++V     +  N   +ACG+  T+ LA +  +
Sbjct: 467 TVV--QALVDNNFHQVACGYSMTIALATSGHV 496



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 38/255 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++  VA G  H+ +    G+V+ +G G  G LG G+R + V  P  +  L    + K 
Sbjct: 360 GLQVLSVACGSWHSALAMSSGKVFTFGDGTFGALGHGNR-ENVAYPKEVESLSGFRTMK- 417

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA----------LLTFGWGLYGQ 320
                                  +ACG  HSA + +  +          L T+G G   +
Sbjct: 418 -----------------------VACGVWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNR 454

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG    +L P+   +L+D    Q+A G   T+ ++  G V+  G + +GQLG      
Sbjct: 455 LGHGDKEARLVPTVVQALVDNNFHQVACGYSMTIALATSGHVFTMGSSNYGQLGNPKADG 514

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           +   ++ +   L S+  + +SCG+ H AVLT   +V +WG    G+LG G   D+  P++
Sbjct: 515 KQPCQVQDK--LSSELVEEISCGSYHVAVLTSRSEVYTWGMGANGRLGHGGIEDKKKPTI 572

Query: 441 V-PIHGFLPRNIACG 454
           V  +     ++IACG
Sbjct: 573 VDALKDRHVKSIACG 587



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 6/147 (4%)

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
           S  D L P    S + + V+QI+ G  H    + +G V+ +G    G+LG G D+  + P
Sbjct: 238 SKTDVLIPKPLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRP 297

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPSLV- 441
           KL+E+  L     + ++CG  H+  +T  G + +WG   Y  G LG G      +P  V 
Sbjct: 298 KLVES--LAVSNVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVS 355

Query: 442 -PIHGFLPRNIACGWWHTLLLAETTQI 467
            P+ G    ++ACG WH+ L   + ++
Sbjct: 356 GPLEGLQVLSVACGSWHSALAMSSGKV 382



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 75/175 (42%), Gaps = 27/175 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P +V         +VA G   T+ L+  G V+  G    GQLG         
Sbjct: 458 GDKEARLVPTVVQALVDNNFHQVACGYSMTIALATSGHVFTMGSSNYGQLG--------- 508

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                      A GK +P  V+        K     V+EI+CG  H AV+T    + T+G
Sbjct: 509 --------NPKADGK-QPCQVQD-------KLSSELVEEISCGSYHVAVLTSRSEVYTWG 552

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
            G  G+ GHG   D+ +P+   +L D  V+ IA G   T CI +    +V G +Q
Sbjct: 553 MGANGRLGHGGIEDKKKPTIVDALKDRHVKSIACGSNFTTCICIHK--WVSGADQ 605


>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
          Length = 1020

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 136/293 (46%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  +    +   P   S + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E + PK++E   +  +    +SCG  H+A++T+
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHTALITD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  +  IP+L      F+ + +ACG  H ++ A
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   ++     E K  K +S G+  SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHSAFVT 206



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 50/285 (17%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ +++   +++ +G    GQLGLGS+   +  P  +  L     + AA G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                     +K+++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  + ++   P   +  +   V  I+ G +H+  ++ +G +YVFG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 368 NQFGQLGTGVDQAENVPKLL----ETPILES---KRAKVVSCGARHSAVLTEDGQVLSWG 420
            + G+LG        +P  L     TP L S   ++   V+CG  H+ VLTE+  V ++G
Sbjct: 217 PENGKLG--------LPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENA-VYTFG 267

Query: 421 WNKYGQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
             ++GQLGLG  + + + P ++  I       I+CG  HT L+ +
Sbjct: 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITD 312



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 28/162 (17%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P LV+  P  K+ +VA GG HT++L++   V+ +G G  GQLGLG+ +     P +I  
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           +      +D+ +               SY   I+CG  H+A++TD G + TFG G +G+ 
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGKL 327

Query: 322 GHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           G G  N  +   P+  S+ +   V+ +A G  H V  +   R
Sbjct: 328 GLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHR 369


>gi|356567464|ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 535

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 129/259 (49%), Gaps = 30/259 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGK 269
           G++I + AAG   T+++SD GQV+ +G    G+   G +  K V  P ++  L++     
Sbjct: 196 GIRIIQAAAGAGRTMLVSDSGQVYAFGKDSFGEAEYGVQGSKTVAAPQIVESLKNI---- 251

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                               +V + A G   +AV++  G + TF WG  G+ GH +    
Sbjct: 252 --------------------FVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDQSD 291

Query: 330 LRPS-YASSLMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGTGVDQAENVPK 385
           + P     +L +I V QIAAG  + +C++ +     VY  G    G+LG G    E  P+
Sbjct: 292 VEPHPLLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPR 351

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIH 444
           L+E   L + +  VV+ GA H+AV+  DG+V +WGW +YG LG G+    ++P +V  + 
Sbjct: 352 LIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALS 411

Query: 445 GFLPRNIACGWWHTLLLAE 463
                ++A G + T ++++
Sbjct: 412 NVKAVHVATGDYTTFVVSD 430



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 163/374 (43%), Gaps = 84/374 (22%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHC 116
           G G ++A +  G + ++GS +  GQ  L  G   E   P P+ T     +++AAAG    
Sbjct: 153 GPGHSIAVTSKGVVYSFGS-NSSGQ--LGHGTTDEEWRPRPIRTLQGIRIIQAAAGAGRT 209

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           + V+++G+VY +G                     KDS G+                 E  
Sbjct: 210 MLVSDSGQVYAFG---------------------KDSFGE----------------AEYG 232

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
           V+  KT +A                 P +V     + + + A G   T +LS  G+V+ +
Sbjct: 233 VQGSKTVAA-----------------PQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
            +G +G+LG  +    V    L+  LE+       P++           AG  Y+  +AC
Sbjct: 276 SWGSDGKLGHHTDQSDVEPHPLLGALENI------PVV--------QIAAGYCYLLCLAC 321

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS--LMDIQVEQIAAGLWHTV 354
                +V        + G GL G+ GHGS  D+  P       L+++Q   +AAG WH  
Sbjct: 322 QPSGMSV-------YSVGCGLGGKLGHGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAA 374

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
            +  +GRV  +G  ++G LG G ++ E+VPK++E   L + +A  V+ G   + V+++DG
Sbjct: 375 VVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEA--LSNVKAVHVATGDYTTFVVSDDG 432

Query: 415 QVLSWGWNKYGQLG 428
            V S+G  +   LG
Sbjct: 433 DVYSFGCGESASLG 446



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 10/169 (5%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT  G + +FG    GQ GHG+T+++ RP    +L  I++ Q AAG   T+ +S  
Sbjct: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTDEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDS 215

Query: 360 GRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           G+VY FG + FG+   GV  ++ V  P+++E+  L++      + G   +AVL+ +G+V 
Sbjct: 216 GQVYAFGKDSFGEAEYGVQGSKTVAAPQIVES--LKNIFVVQAAIGNFFTAVLSREGRVY 273

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLLA 462
           ++ W   G+  LG   D++     P+ G L       IA G+ + L LA
Sbjct: 274 TFSWGSDGK--LGHHTDQSDVEPHPLLGALENIPVVQIAAGYCYLLCLA 320



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ ++ +G VY FG N  GQLG G    E  P+ + T  L+  R    + GA
Sbjct: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTDEEWRPRPIRT--LQGIRIIQAAAGA 206

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLG 430
             + ++++ GQV ++G + +G+   G
Sbjct: 207 GRTMLVSDSGQVYAFGKDSFGEAEYG 232



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 67/182 (36%), Gaps = 23/182 (12%)

Query: 82  GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW----------R 131
           G    T  K+    E F L     +V AA  W H   V   G V TWGW           
Sbjct: 340 GHGSRTDEKYPRLIEQFGLLNLQPMVVAAGAW-HAAVVGRDGRVCTWGWGRYGCLGHGNE 398

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
           EC    KV     +  +    +    + + ++         GE        +   E+   
Sbjct: 399 ECESVPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNAAGNDEQGNR 458

Query: 192 PASGDEFFTLSPCLVT----LNPGV---KITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
            A+      LSP LVT    +N  V    +T       HT  L++ G+++ +G G +GQL
Sbjct: 459 HAN-----VLSPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 513

Query: 245 GL 246
           G+
Sbjct: 514 GI 515


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 137/299 (45%), Gaps = 42/299 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L+ +     I +VA GG HTL+L + G +  +GY   GQLG G++   V +P  +   
Sbjct: 35  PELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYNQYGQLGNGTK---VDSP--LDAS 89

Query: 263 EHAASGKDRPLLVRQGSVNSS-------------GKAGR------------------SYV 291
              +S  ++ + V  G  +S+             GK GR                     
Sbjct: 90  RDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTIPCRITHLPRA 149

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA-SSLMDIQVEQIAAGL 350
            +I CG   +A +TD G L T+GWG +GQ G GS  D   P        ++ + Q+A G 
Sbjct: 150 HKIFCGYHITAAITDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGD 208

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            H +  +  G VY +G N+FGQLG G  ++  + P LL +  L       V+ G RHSA 
Sbjct: 209 RHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTS--LAGMMVTFVAAGDRHSAA 266

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           +T  G + +WG    GQ G GD  D ++P LV  + G     + CG   T+ L++   I
Sbjct: 267 VTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDI 325



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 99/203 (48%), Gaps = 27/203 (13%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           +  + I+++A G RH L+ ++ G V+ WG    GQLG+G   ++  +P L+  L      
Sbjct: 196 DANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSL------ 249

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                            AG   V  +A G RHSA VT+ G+L T+G G  GQCGHG  ND
Sbjct: 250 -----------------AGM-MVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYND 291

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              P    SL+ + + ++  G   TV +S +  +YVFG N +GQLG G   +   P+ L 
Sbjct: 292 CDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLF 351

Query: 389 TPILESKRAKVVSCGARHSAVLT 411
             I  +     ++CG  H  + T
Sbjct: 352 FSIPGTID---ITCGHFHCTLWT 371



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 121/276 (43%), Gaps = 32/276 (11%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--------LGSRIKMVPTPHLIPCLEH 264
           K+  VA G  H+  L   G V+ WG G  G+LG        +  RI  +P  H I C  H
Sbjct: 98  KLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTIPCRITHLPRAHKIFCGYH 157

Query: 265 -AASGKDRPLL---------VRQGSVNSS-------GKAGRSYVKEIACGGRHSAVVTDA 307
             A+  D  L          + QGS+  S              + ++ACG RH  V T++
Sbjct: 158 ITAAITDDGLYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRTES 217

Query: 308 GALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           G + T+G   +GQ G G  N+    P   +SL  + V  +AAG  H+  ++  G ++ +G
Sbjct: 218 GDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWG 277

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
               GQ G G     ++P L+E+  L       V CG   +  L++D  +  +G N YGQ
Sbjct: 278 CGAEGQCGHGDYNDCDMPFLVES--LVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQ 335

Query: 427 LGLGDSIDRNIPS--LVPIHGFLPRNIACGWWHTLL 460
           LG G       P      I G +  +I CG +H  L
Sbjct: 336 LGDGSKSSCCTPRKLFFSIPGTI--DITCGHFHCTL 369



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 18/148 (12%)

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG------V 377
           G+ +D  +P       +  ++Q+A G  HT+ +  +G ++ FG NQ+GQLG G      +
Sbjct: 27  GTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYNQYGQLGNGTKVDSPL 86

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           D + ++  L       S +   V+CG  HSA L  +G V +WG  K G+LG  D   R I
Sbjct: 87  DASRDISSL-------SNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTI 139

Query: 438 PSLVPIHGFLPR--NIACGWWHTLLLAE 463
           P  +     LPR   I CG+  T  + +
Sbjct: 140 PCRIT---HLPRAHKIFCGYHITAAITD 164



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 108/302 (35%), Gaps = 89/302 (29%)

Query: 60  CGFAL--ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWAHC 116
           CG+ +  A ++ G L TWG  +  GQ    S +    P+         ++ + A G  HC
Sbjct: 154 CGYHITAAITDDG-LYTWGWGE-HGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHC 211

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           +  TE+G+VYTWG  E          FG  G       G+ + + +              
Sbjct: 212 LVRTESGDVYTWGSNE----------FGQLG------IGRYNEIYS-------------- 241

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
                                    SP L+T   G+ +T VAAG RH+  +++ G ++ W
Sbjct: 242 -------------------------SPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTW 276

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G EGQ G G                   +  D P LV              ++ ++ C
Sbjct: 277 GCGAEGQCGHGD-----------------YNDCDMPFLVE--------SLVGVFILKVFC 311

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS----SLMDIQVEQIAAGLWH 352
           G   +  ++    +  FG   YGQ G GS +    P          +DI        LW 
Sbjct: 312 GHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTIDITCGHFHCTLWT 371

Query: 353 TV 354
           T+
Sbjct: 372 TL 373



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 6/95 (6%)

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
           + G+ GT  D  +  P+L++  + E+   + V+CG  H+ VL EDG + S+G+N+YGQLG
Sbjct: 22  RLGRRGTRDDSCQ--PELIK--VFENCAIQQVACGGGHTLVLLEDGCLHSFGYNQYGQLG 77

Query: 429 LGDSIDRNIPSLVPIHGFLPRNI--ACGWWHTLLL 461
            G  +D  + +   I     + I  ACG +H+  L
Sbjct: 78  NGTKVDSPLDASRDISSLSNKLIAVACGRYHSAAL 112


>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
           paniscus]
          Length = 815

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 135/293 (46%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  +    +   P   S + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E   PK++E   +  +    +SCG  H+A++T+
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHTALITD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  +  IP+L      F+ + +ACG  H ++ A
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVIFA 365



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   ++     E K  K +S G+  SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHSAFVT 206



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 42/281 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ +++   +++ +G    GQLGLGS+   V  P  +  L     + AA G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                     +K+++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  + ++   P   +  +   V  I+ G +H+  ++ +G +YVFG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 368 NQFGQLGTGVDQAEN--VPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            + G+LG       N   P+L+ E P    ++   V+CG  H+ VLTE+  V ++G  ++
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIP----EKVIQVACGGEHTVVLTENA-VYTFGLGQF 271

Query: 425 GQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           GQLGLG  + + + P ++  I       I+CG  HT L+ +
Sbjct: 272 GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITD 312



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 28/162 (17%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P LV+  P  K+ +VA GG HT++L++   V+ +G G  GQLGLG+ +     P +I  
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           +      +D+ +               SY   I+CG  H+A++TD G + TFG G +G+ 
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGKL 327

Query: 322 GHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           G G  N  +   P+  S+ +   V+ +A G  H V  +   R
Sbjct: 328 GLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVIFAAPHR 369


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 19/257 (7%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + K++AG  H+L L+  G+ + +G+G  G+LG G     +  P  I    H AS    P 
Sbjct: 92  VAKISAGTTHSLALTKDGKAYSFGFGMFGRLGHGDETDQL-LPREITLRGHGAS----PP 146

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           +  +   N +       ++ +A G  HS ++T  G + +FG G+ G  GHG  + +LRP+
Sbjct: 147 VGDRVEENETDPV----IEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPT 202

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPI 391
              +L D ++  +A G  +T+ +  EGRV+ FG +  +F +   G  QA  V  LL + +
Sbjct: 203 MIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDYSEFPKFTEG--QARFV--LLPSAL 258

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGF--L 447
             ++    V  G  H  +LT +G++L++G  K G+LGLGD  +R  P+ V  P +G   +
Sbjct: 259 GLAEEITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSV 318

Query: 448 PRNIACGWWHTLLLAET 464
             +IACG  H L L + 
Sbjct: 319 EIDIACGAKHGLALVDV 335



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 32/201 (15%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ--VEQIAA 348
           V  ++ GG HS V+T+ G + +FG GL+G+ GHG+      P    +  D    V +I+A
Sbjct: 39  VVAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRI-AFFDTTAGVAKISA 97

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL------------------ET- 389
           G  H++ ++ +G+ Y FG   FG+LG G +  + +P+ +                  ET 
Sbjct: 98  GTTHSLALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETD 157

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
           P++E      V+ G  HS +LT DG+V S+G    G LG GD   R  P++  I     R
Sbjct: 158 PVIEH-----VAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTM--IEALADR 210

Query: 450 NI---ACGWWHTLLLAETTQI 467
            I   ACG  +TL+L +  ++
Sbjct: 211 RIVSMACGSANTLVLDDEGRV 231



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 19/172 (11%)

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           G +L+ G G +G  G G    QL   +   +L   +V  ++AG  H++ ++ EGRV+ FG
Sbjct: 3   GVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFG 62

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
               G+LG G ++    P+ +      +  AK +S G  HS  LT+DG+  S+G+  +G+
Sbjct: 63  NGLHGRLGHGNEETCFEPRRIAFFDTTAGVAK-ISAGTTHSLALTKDGKAYSFGFGMFGR 121

Query: 427 LGLGDSIDRNIPSLVPI--HGFLP---------------RNIACGWWHTLLL 461
           LG GD  D+ +P  + +  HG  P                ++A G++H+LLL
Sbjct: 122 LGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLL 173



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 166/430 (38%), Gaps = 103/430 (23%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
           G +  +  +L+PI  R         V  GG   +L  +E G++ ++G+        L  G
Sbjct: 19  GDAVTQLSVLTPI--RALEAHRVVAVSAGGH-HSLVLTEEGRVFSFGNGL---HGRLGHG 72

Query: 90  KHGETPEPFPLP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
                 EP  +    T A V K +AG  H +++T+ G+ Y++G+                
Sbjct: 73  NEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGF---------------- 116

Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSPC 204
           G F +   G +    T+Q  P             +  + R    +P  GD  E     P 
Sbjct: 117 GMFGRLGHGDE----TDQLLP-------------REITLRGHGASPPVGDRVEENETDPV 159

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-- 262
                    I  VAAG  H+L+L+  G+V+ +G G  G LG G R K +  P +I  L  
Sbjct: 160 ---------IEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRL-RPTMIEALAD 209

Query: 263 ----EHAASGKDRPLLVRQGSVNSSGKAGRSY----------------------VKEIAC 296
                 A    +  +L  +G V   G     +                      + E+  
Sbjct: 210 RRIVSMACGSANTLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEEITEVRA 269

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY----ASSLMDIQVEQIAAGLWH 352
           G  H  ++T  G LL FG G  G+ G G   ++L P+     ++    ++++ IA G  H
Sbjct: 270 GEGHCLLLTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEID-IACGAKH 328

Query: 353 TVC-ISVEG---RVYVFGGNQFGQLGTGVDQ--------AENVPKLLETPILESKRAKVV 400
            +  + V G   R+Y FG    GQL  G  Q          ++P LL   I+ +     +
Sbjct: 329 GLALVDVPGEGPRLYAFGSGDQGQLANGHRQDRASPTATTTSLPALLHQHIVPA----AI 384

Query: 401 SCGARHSAVL 410
           S G  HS VL
Sbjct: 385 SAGKAHSLVL 394



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           + G V   GG Q G LG G D    +  L     LE+ R   VS G  HS VLTE+G+V 
Sbjct: 1   MRGVVLSAGGGQHGSLGQG-DAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVF 59

Query: 418 SWGWNKYGQLGLGD 431
           S+G   +G+LG G+
Sbjct: 60  SFGNGLHGRLGHGN 73


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 174/409 (42%), Gaps = 77/409 (18%)

Query: 63  ALATSESGKLITWGSADD--EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
           ++A S+ GK+ TWG       G   +TS    + PE         + + + G  H  +++
Sbjct: 88  SMALSQDGKVYTWGKNKGGILGHYDITSFNMIQ-PELVEKLENIQIKQISCGPFHMAAIS 146

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
           + GE+YTWG           +D G                          + G E+ ++ 
Sbjct: 147 QDGELYTWG----------NKDHG--------------------------KLGHEIQQKS 170

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
                +  ++N    +   ++ P  V    G+K  +V+ GG+ T++L++ G+V+ +G   
Sbjct: 171 NKVEIKRGNQNYDYAEG--SMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSM 228

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           +GQLG  S       P  IP L++                          +  I CG + 
Sbjct: 229 KGQLGYQSEETGNFQPKKIPDLQN--------------------------IINIDCGQQF 262

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           SA V+ +G + T+G   +GQ G+  +  Q RP+  +     ++  I+ G      +S EG
Sbjct: 263 SAAVSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEG 322

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           +++ +G    GQLG         PK +E    + K  K V CG  H+A LT++ Q+  +G
Sbjct: 323 KLFTWGYGNDGQLGHSNRNDLYAPKQIE---FKEKIIK-VDCGGTHTAFLTQNNQLYLFG 378

Query: 421 WNKYGQLGLGDSID-----RNIPSLVPIHGFLP-RNIACGWWHTLLLAE 463
               GQLG+G++I+     R  P +V     +   ++ CG  +TL + E
Sbjct: 379 RGNEGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAITE 427



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 35/282 (12%)

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           F  + P LV     ++I +++ G  H   +S  G+++ WG    G+LG            
Sbjct: 116 FNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLG------------ 163

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-----------VKEIACGGRHSAVVTD 306
                 H    K   + +++G+ N     G               K+++CGG+ + V+T+
Sbjct: 164 ------HEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTE 217

Query: 307 AGALLTFGWGLYGQCGHGSTND-QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
            G + +FG  + GQ G+ S      +P     L +I    I  G   +  +S  G+VY +
Sbjct: 218 NGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDLQNI--INIDCGQQFSAAVSSSGKVYTW 275

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G N  GQLG      +  P   +       +   +SCG    A L+ +G++ +WG+   G
Sbjct: 276 GNNDHGQLGNNQSIYQARPN--QVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDG 333

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           QLG  +  D   P  +     + + + CG  HT  L +  Q+
Sbjct: 334 QLGHSNRNDLYAPKQIEFKEKIIK-VDCGGTHTAFLTQNNQL 374



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 114/270 (42%), Gaps = 51/270 (18%)

Query: 233 VWGWGYGGEGQLGLGSR-----------------IKMVPTPHLIPCLEHAAS----GKDR 271
           V+ WGYG  GQLGL +                  IK+     +   L         GK++
Sbjct: 45  VYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNK 104

Query: 272 PLLVRQGSVNSSG--------KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
             ++    + S          K     +K+I+CG  H A ++  G L T+G   +G+ GH
Sbjct: 105 GGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGH 164

Query: 324 -------------GSTN-----DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
                        G+ N       + P+   SL  I+ +Q++ G   TV ++  G VY F
Sbjct: 165 EIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSF 224

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G +  GQLG    Q+E         I + +    + CG + SA ++  G+V +WG N +G
Sbjct: 225 GNSMKGQLGY---QSEETGNFQPKKIPDLQNIINIDCGQQFSAAVSSSGKVYTWGNNDHG 281

Query: 426 QLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
           QLG   SI +  P+ V    G    NI+CG
Sbjct: 282 QLGNNQSIYQARPNQVTGFGGNKIINISCG 311



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 26/198 (13%)

Query: 294 IACGGRHSAVVTDA---GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +  G    ++ TD      +  +G+G +GQ G  + N+Q  P     L D  + ++ A  
Sbjct: 26  VTSGFFAQSIFTDTPPQKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANK 85

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSA 408
             ++ +S +G+VY +G N+ G LG     + N+  P+L+E   LE+ + K +SCG  H A
Sbjct: 86  SVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVEK--LENIQIKQISCGPFHMA 143

Query: 409 VLTEDGQVLSWGWNKYGQLGL--------------GDSIDRNIPSLVP-----IHGFLPR 449
            +++DG++ +WG   +G+LG                 + D    S++P     ++G   +
Sbjct: 144 AISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCK 203

Query: 450 NIACGWWHTLLLAETTQI 467
            ++CG   T++L E  ++
Sbjct: 204 QVSCGGQFTVVLTENGEV 221


>gi|307107146|gb|EFN55390.1| hypothetical protein CHLNCDRAFT_57991 [Chlorella variabilis]
          Length = 596

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 51/279 (18%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLIPCLEHAASGKD 270
           + +  V+AG  H+  +S  G+++ WG    G+LG G    + V  P +I  L+       
Sbjct: 221 IHLAVVSAGSSHSASISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITSLQ------- 273

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                            R+ +  ++CG  H+  +++ G L + G G +GQ GHG  +D+ 
Sbjct: 274 -----------------RTRIVSVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEG 316

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG----TGVDQAENVPKL 386
                 ++   +V  +AAG  H+V ++ +G+++ +G    GQLG      V Q  N P+ 
Sbjct: 317 LLMLVDTIRHERVVSVAAGRAHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGPN-PQP 375

Query: 387 LETPI------LESKRAK------VVSCGARHSAVLTEDGQVLSWGWNKYGQ--LGLGDS 432
           L  P       LE  R K       ++ G  HS  +T  G +L++G NK+GQ  LG GD+
Sbjct: 376 LSIPFPQAIQSLEPARLKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDT 435

Query: 433 IDRNIPSLVPIH-----GFLPR--NIACGWWHTLLLAET 464
           +DR IP+ VP+      G L R   + CG  HTL L + 
Sbjct: 436 LDRMIPTEVPLALESEGGQLVRAMQVHCGAQHTLALVQV 474



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 23/235 (9%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           ++  VAAG  H++ L+  G+++ WG   +GQLG      ++  P+  P           P
Sbjct: 328 RVVSVAAGRAHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGPNPQPL--------SIP 379

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC--GHGSTNDQL 330
                 S+  +     + V  IA GG HS  VT AGALL FG   +GQ   G G T D++
Sbjct: 380 FPQAIQSLEPARLKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRM 439

Query: 331 RPSYASSLMD------IQVEQIAAGLWHTVC-ISVEG--RVYVFGGNQFGQLGTGVDQAE 381
            P+     ++      ++  Q+  G  HT+  + V+G  +V   GGN +G+LG G D+ E
Sbjct: 440 IPTEVPLALESEGGQLVRAMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLG-DRLE 498

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
              +    P L+ K    VS G  H+A + +DG++  WG    GQLGLGD  DRN
Sbjct: 499 R-HRFHPIPALKGKSIVCVSVGDWHNAAICQDGRLYVWGRGDCGQLGLGD--DRN 550



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 125/287 (43%), Gaps = 60/287 (20%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P ++T     +I  V+ G  HTL +S+ GQ+W  G G  GQLG G         H     
Sbjct: 266 PRMITSLQRTRIVSVSCGANHTLAISETGQLWSCGRGRHGQLGHG---------HF---- 312

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                  D  LL+   ++          V  +A G  HS  +   G + T+G    GQ G
Sbjct: 313 ------HDEGLLMLVDTIR------HERVVSVAAGRAHSVALAADGKIFTWGDASKGQLG 360

Query: 323 H--------GSTNDQLRPSYASSLMDIQ---------VEQIAAGLWHTVCISVEGRVYVF 365
           H        G     L   +  ++  ++         V  IAAG  H++ ++V G +  F
Sbjct: 361 HAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPARVTAIAAGGDHSMAVTVAGALLAF 420

Query: 366 GGNQFGQ--LGTGVDQAENVPKLLETPI-LESK-----RAKVVSCGARHSAVLTE---DG 414
           G N+ GQ  LGTG      +P   E P+ LES+     RA  V CGA+H+  L +     
Sbjct: 421 GSNKHGQARLGTGDTLDRMIPT--EVPLALESEGGQLVRAMQVHCGAQHTLALVQVQGHH 478

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC---GWWHT 458
           QV S G N YG+LGLGD ++R+     PI     ++I C   G WH 
Sbjct: 479 QVRSVGGNSYGELGLGDRLERH--RFHPIPALKGKSIVCVSVGDWHN 523



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 135/345 (39%), Gaps = 86/345 (24%)

Query: 59  GCGFALATSESGKL----------ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
           G    LA SE+G+L          +  G   DEG   L      E            VV 
Sbjct: 283 GANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLMLVDTIRHE-----------RVVS 331

Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
            AAG AH V++   G+++TWG      ++K         +  +    +  ++P  QA   
Sbjct: 332 VAAGRAHSVALAADGKIFTWG-----DASKGQLGHAQLAAVMQGPNPQPLSIPFPQAI-- 384

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
                              +S  PA              L P  ++T +AAGG H++ ++
Sbjct: 385 -------------------QSLEPAR-------------LKPPARVTAIAAGGDHSMAVT 412

Query: 229 DMGQVWGWGYGGEGQ--LGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
             G +  +G    GQ  LG G  + +M+PT   +P    +  G+    LVR         
Sbjct: 413 VAGALLAFGSNKHGQARLGTGDTLDRMIPTE--VPLALESEGGQ----LVR--------- 457

Query: 286 AGRSYVKEIACGGRHS-AVVTDAG--ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                  ++ CG +H+ A+V   G   + + G   YG+ G G   ++ R     +L    
Sbjct: 458 -----AMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPIPALKGKS 512

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           +  ++ G WH   I  +GR+YV+G    GQLG G D+    PK L
Sbjct: 513 IVCVSVGDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWAPKQL 557



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 18/175 (10%)

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPS-------------YASSLMDIQVEQIAAGLWHTVC 355
           A+   G G +GQ G    ++Q +P              Y  +  DI +  ++AG  H+  
Sbjct: 176 AMYAMGRGFHGQLGLEQFDNQEQPQRVGAVERDVKVPLYQGAPDDIHLAVVSAGSSHSAS 235

Query: 356 ISVEGRVYVFGGNQFGQLGTG--VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           IS  G +Y +G    G+LG G       + P+++ +  L+  R   VSCGA H+  ++E 
Sbjct: 236 ISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITS--LQRTRIVSVSCGANHTLAISET 293

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           GQ+ S G  ++GQLG G   D  +  LV  I      ++A G  H++ LA   +I
Sbjct: 294 GQLWSCGRGRHGQLGHGHFHDEGLLMLVDTIRHERVVSVAAGRAHSVALAADGKI 348


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 180/433 (41%), Gaps = 61/433 (14%)

Query: 43  PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
           P RL   ++   V  G    +LA    G + TWG  +  GQ  L  G   +   P  +  
Sbjct: 102 PVRLAALENIVSVVSGDA-HSLALGADGSVWTWG-GNSSGQ--LGDGTTTDRATPMRVAG 157

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
             SVV  AAG  H +++ E G V+ WG          T   G  G         Q  L  
Sbjct: 158 LDSVVAVAAGDFHSLALREDGTVWAWG----------TNFHGQLGRGHT-----QPGLTP 202

Query: 163 EQAPPSDK----RAGEE---VVKRRKTSSAREESENPASGDEFFT--LSPCLVTLNPGVK 213
           EQ P  +      AG +    V    T  A   + +   GD   T  LSP  V+   G  
Sbjct: 203 EQVPGLNGVVALAAGFDFTLAVLEDGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSG-- 260

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASGK 269
           IT+V AG  H L L   G VW WG    GQLG G+       P  +P LE     A+   
Sbjct: 261 ITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRA-VPMQVPGLERVKAVASMDS 319

Query: 270 DRPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGA 309
           D   L+  G+V     N SG+ G                + V  +  G +H+ V+   G 
Sbjct: 320 DSLALLDTGAVFAWGANGSGQLGDGDTTDRATPGPVPGLNAVASVVGGAQHALVLRKDGT 379

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           L  +G GL GQ GHG +   + P+    L    V  +A G +H++    +G V+ +G N 
Sbjct: 380 LWAWGGGLSGQLGHGGSERHVVPAPVMRLAG--VTSMATGSFHSLAALGDGSVWAWGRNT 437

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
           +GQLG G     +    +E   L   R+  V+  A HS  +  DG V +WG N  GQLG 
Sbjct: 438 YGQLGDGSTAERHAAVRVEG--LGGVRS--VASAAHHSLAVGMDGTVWAWGRNAAGQLGD 493

Query: 430 GDSIDRNIPSLVP 442
           G ++DR  P  VP
Sbjct: 494 GTTLDRARPVAVP 506



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 169/424 (39%), Gaps = 82/424 (19%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  ++G +  WG+    G   L  G   +   P P+P   +V     G  H + + + 
Sbjct: 321 SLALLDTGAVFAWGA---NGSGQLGDGDTTDRATPGPVPGLNAVASVVGGAQHALVLRKD 377

Query: 123 GEVYTWGW------------RECVPSAKVTRDFG----SAGSFQKDST---------GKQ 157
           G ++ WG             R  VP A V R  G    + GSF   +          G+ 
Sbjct: 378 GTLWAWGGGLSGQLGHGGSERHVVP-APVMRLAGVTSMATGSFHSLAALGDGSVWAWGRN 436

Query: 158 SALPTEQAPPSDKRAG---EEVVKRRKTSSAREES-------------ENPAS--GDEFF 199
           +         +++ A    E +   R  +SA   S              N A   GD   
Sbjct: 437 TYGQLGDGSTAERHAAVRVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGT- 495

Query: 200 TLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           TL        PG+  +T VAAGG H L L   G VW WGY   GQLG G+ +        
Sbjct: 496 TLDRARPVAVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTV-------- 547

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
                      DR   VR         +G   V  +A G   S  +   G + T+G G  
Sbjct: 548 -----------DRLTPVR--------VSGLGAVVAVAAGSYFSMALQSDGTVWTWGEGFE 588

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G    +L P     L +I   ++AAG  H + +  +G V+ +G N  GQLG G  
Sbjct: 589 GQLGDGGGVQRLSPVRVEGLANI--TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSW 646

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
                P  ++ P L+   A  VS G  HS  L  DG V +WG+N YGQLG G    R  P
Sbjct: 647 ADRFRP--VQVPGLQGITA--VSGGRSHSMALQGDGTVRAWGYNGYGQLGDGTLTSRVRP 702

Query: 439 SLVP 442
           +L+P
Sbjct: 703 ALIP 706



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 166/406 (40%), Gaps = 57/406 (14%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA    G +  WG  +  GQ  L  G   +   P  +P   SV   AAG +H +++   
Sbjct: 471 SLAVGMDGTVWAWGR-NAAGQ--LGDGTTLDRARPVAVPGLTSVTAVAAGGSHVLALRSD 527

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G V+ WG+             G   +  + +  + S L    A  +       +      
Sbjct: 528 GSVWAWGYNAL-------GQLGDGTTVDRLTPVRVSGLGAVVAVAAGSYFSMALQSDGTV 580

Query: 183 SSAREESENP-ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
            +  E  E     G     LSP  V +     IT+VAAG  H L +   G VW WG  GE
Sbjct: 581 WTWGEGFEGQLGDGGGVQRLSP--VRVEGLANITRVAAGSAHALAVRGDGTVWAWGDNGE 638

Query: 242 GQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
           GQLG GS   R + V  P L                  QG    SG  GRS         
Sbjct: 639 GQLGDGSWADRFRPVQVPGL------------------QGITAVSG--GRS--------- 669

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            HS  +   G +  +G+  YGQ G G+   ++RP+    L  IQ    +    H + +  
Sbjct: 670 -HSMALQGDGTVRAWGYNGYGQLGDGTLTSRVRPALIPGLTGIQALHPSH--LHVLALHA 726

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           +G +  +G N+FGQLG G      VP      +    R   +S G  H+ ++  DG V++
Sbjct: 727 DGTLRGWGYNRFGQLGLGAAGWSAVP----VQVRGIGRVDRLSVGRAHTLMVRADGTVMA 782

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLP--RNIACGWWHTLLLA 462
           WG N  GQLG G S  R  P  VP    +P  R++A G  H+L LA
Sbjct: 783 WGENGSGQLGDGTSTHRTGPVSVP---GVPCVRSVASGIQHSLALA 825



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 188/470 (40%), Gaps = 80/470 (17%)

Query: 29  PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
           PG +PE+ P L+ + A   G D           F LA  E G +  WGS    G   L  
Sbjct: 198 PGLTPEQVPGLNGVVALAAGFD-----------FTLAVLEDGTVRAWGS---NGSGQLGD 243

Query: 89  GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
           G   +   P  +   + + +  AG  H +++ + G V+TWG               +A  
Sbjct: 244 GTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWG--------------SNASG 289

Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE-----------SENPASGDE 197
              D T    A+P +   P  +R  + V      S A  +           S     GD 
Sbjct: 290 QLGDGTWNDRAVPMQV--PGLERV-KAVASMDSDSLALLDTGAVFAWGANGSGQLGDGDT 346

Query: 198 FFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPT 255
               +P  V   PG+  +  V  G +H L+L   G +W WG G  GQLG G S   +VP 
Sbjct: 347 TDRATPGPV---PGLNAVASVVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPA 403

Query: 256 PHL-IPCLEHAASGKDRPLL-VRQGSV-----NSSGKAGRSY---------------VKE 293
           P + +  +   A+G    L  +  GSV     N+ G+ G                  V+ 
Sbjct: 404 PVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAAVRVEGLGGVRS 463

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +A    HS  V   G +  +G    GQ G G+T D+ RP     L    V  +AAG  H 
Sbjct: 464 VASAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGL--TSVTAVAAGGSHV 521

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARHSAVLT 411
           + +  +G V+ +G N  GQLG G      V +L  TP+  S    V  V+ G+  S  L 
Sbjct: 522 LALRSDGSVWAWGYNALGQLGDGT----TVDRL--TPVRVSGLGAVVAVAAGSYFSMALQ 575

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
            DG V +WG    GQLG G  + R  P  V     + R +A G  H L +
Sbjct: 576 SDGTVWTWGEGFEGQLGDGGGVQRLSPVRVEGLANITR-VAAGSAHALAV 624



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 137/300 (45%), Gaps = 38/300 (12%)

Query: 171  RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSD 229
            RA   +V+   T  A  E+ +   GD   T     V++ PGV  +  VA+G +H+L L+ 
Sbjct: 768  RAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSV-PGVPCVRSVASGIQHSLALAC 826

Query: 230  MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV----- 280
             G VW WG    GQLG G+    V TP L+  L      A+G D  + +R  GSV     
Sbjct: 827  DGTVWAWGANARGQLGDGTTTPRV-TPGLVEGLRGVVALAAGGDASVALRADGSVWSWGG 885

Query: 281  NSSGKAGRSYVKE---------------IACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
            N+SG+ G   + +               +A G  H+  V + GAL  +G    GQ G G 
Sbjct: 886  NASGQLGDGTLTDRALPAHVEHLSNAVAVAVGETHALAVGEDGALWAWGANGSGQLGDGG 945

Query: 326  TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
            T   L P     L   +V  +AAG   +V +  +G  + +G N  GQLG G + A +VP 
Sbjct: 946  TAPSLTPVRVKGLE--RVASVAAGRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSVPN 1003

Query: 386  LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI-----DRNIPSL 440
                 +   K  + +S GA H   L+ DG V +WG N  GQLG G S       R +P L
Sbjct: 1004 ----QVTSLKGIRAMSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPRQVPEL 1059



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 178/444 (40%), Gaps = 61/444 (13%)

Query: 29   PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
            P  +P     L  + A   GGD+           ++A    G + +WG  +  GQ  L  
Sbjct: 848  PRVTPGLVEGLRGVVALAAGGDA-----------SVALRADGSVWSWG-GNASGQ--LGD 893

Query: 89   GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
            G   +   P  +   ++ V  A G  H ++V E G ++ WG       A  +   G  G+
Sbjct: 894  GTLTDRALPAHVEHLSNAVAVAVGETHALAVGEDGALWAWG-------ANGSGQLGDGGT 946

Query: 149  FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA--REESENPASGDEFFTLSPCLV 206
                +  +   L    A  +  RA    V+   T+ A     S     G       P  V
Sbjct: 947  APSLTPVRVKGLE-RVASVAAGRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSVPNQV 1005

Query: 207  TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---E 263
            T   G++   ++AG  H + LS  G VW WG    GQLG GS       P  +P L   E
Sbjct: 1006 TSLKGIR--AMSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPRQVPELRGVE 1063

Query: 264  HAASGKDRPLLV------RQGSVNSSGKAG--------------------RSYVKEIACG 297
              A+G+   + V      R    N  G+ G                    R  V+ +   
Sbjct: 1064 AVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAW 1123

Query: 298  GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
            G+H+ V    G + T+G   +GQ G G+T  +  P     L    V  +++G WH++ + 
Sbjct: 1124 GQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLA--SVVAVSSGAWHSLALL 1181

Query: 358  VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
             +G V+ +G N FGQLG G     + P+     +        +  G  H+  +  DG V 
Sbjct: 1182 SDGTVWAWGANGFGQLGDGT----STPRTRPVQVAGLGDVVAIGSGGYHALAVCSDGSVW 1237

Query: 418  SWGWNKYGQLGLGDSIDRNIPSLV 441
            +WG+N +GQLG G +  R++P+ V
Sbjct: 1238 TWGYNAFGQLGDGTAESRSLPTRV 1261



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 186/480 (38%), Gaps = 85/480 (17%)

Query: 30   GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
            GT+P  +P+      R+ G +    V  G   F++A  + G    WG+ +  GQ  L  G
Sbjct: 945  GTAPSLTPV------RVKGLERVASVAAGRA-FSVAVRDDGTAWAWGT-NPSGQ--LGDG 994

Query: 90   KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG-----------------WRE 132
             +     P  + +   +   +AG  H V+++  G V+TWG                 W  
Sbjct: 995  TNHARSVPNQVTSLKGIRAMSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPR 1054

Query: 133  CVPSAK-------------------VTRDFGSA--GSFQKDSTGKQSAL-------PTEQ 164
             VP  +                     R +GS   G      TG Q          P  +
Sbjct: 1055 QVPELRGVEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIR 1114

Query: 165  APPSDKRA-GEEVVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGG 221
             P    RA G+  V +    + +   +N     GD   T     +T+     +  V++G 
Sbjct: 1115 PPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLASVVAVSSGA 1174

Query: 222  RHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
             H+L L   G VW WG  G GQLG G+   R + V    L   +   + G     +   G
Sbjct: 1175 WHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRPVQVAGLGDVVAIGSGGYHALAVCSDG 1234

Query: 279  SV-----NSSGKAG------RSY---------VKEIACGGRHSAVVTDAGALLTFGWGLY 318
            SV     N+ G+ G      RS          V  +A G  +S  +   G L  +G    
Sbjct: 1235 SVWTWGYNAFGQLGDGTAESRSLPTRVEGLEGVVAVAGGDHYSLALHSDGTLSAWGNNAS 1294

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            GQ G G+     R S  +      V  + AG  HTV +  +G V+ +G N FGQLG G  
Sbjct: 1295 GQLGDGTGT--TRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGAS 1352

Query: 379  QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
                  +L+  P+        V  GARH+  +   G V +WG N +GQLGLGD+ +R  P
Sbjct: 1353 GTRM--RLVPRPVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEP 1410



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 186/451 (41%), Gaps = 56/451 (12%)

Query: 22  VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
           V+ WGY   G   + + +    P R+ G  +   V  G   F++A    G + TWG    
Sbjct: 530 VWAWGYNALGQLGDGTTVDRLTPVRVSGLGAVVAVAAGSY-FSMALQSDGTVWTWGEGF- 587

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
           EGQ  L  G   +   P  +   A++ + AAG AH ++V   G V+ WG           
Sbjct: 588 EGQ--LGDGGGVQRLSPVRVEGLANITRVAAGSAHALAVRGDGTVWAWG----------D 635

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQA--PPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
              G  G        +   +P  Q     S  R+    ++   T  A   +     GD  
Sbjct: 636 NGEGQLGDGSWADRFRPVQVPGLQGITAVSGGRSHSMALQGDGTVRAWGYNGYGQLGDGT 695

Query: 199 FT--LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVP 254
            T  + P L+   PG+  I  +     H L L   G + GWGY   GQLGLG+     VP
Sbjct: 696 LTSRVRPALI---PGLTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSAVP 752

Query: 255 TP-HLIPCLEHAASGKDRPLLVR-QGSV-----NSSGKAGRSY---------------VK 292
                I  ++  + G+   L+VR  G+V     N SG+ G                  V+
Sbjct: 753 VQVRGIGRVDRLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSVPGVPCVR 812

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            +A G +HS  +   G +  +G    GQ G G+T  ++ P     L    V  +AAG   
Sbjct: 813 SVASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVTPGLVEGLRG--VVALAAGGDA 870

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           +V +  +G V+ +GGN  GQLG G      +P  +E        A  V+ G  H+  + E
Sbjct: 871 SVALRADGSVWSWGGNASGQLGDGTLTDRALPAHVE----HLSNAVAVAVGETHALAVGE 926

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           DG + +WG N  GQLG G +     PSL P+
Sbjct: 927 DGALWAWGANGSGQLGDGGT----APSLTPV 953



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 171/433 (39%), Gaps = 49/433 (11%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G    L     G ++ WG   + G   L  G       P  +P    V   A+G  H ++
Sbjct: 767  GRAHTLMVRADGTVMAWG---ENGSGQLGDGTSTHRTGPVSVPGVPCVRSVASGIQHSLA 823

Query: 119  VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
            +   G V+ WG       A      G   +  + + G    L    A  +    G+  V 
Sbjct: 824  LACDGTVWAWG-------ANARGQLGDGTTTPRVTPGLVEGLRGVVALAA---GGDASVA 873

Query: 179  RRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
             R   S      N +   GD   T       +        VA G  H L + + G +W W
Sbjct: 874  LRADGSVWSWGGNASGQLGDGTLTDRALPAHVEHLSNAVAVAVGETHALAVGEDGALWAW 933

Query: 237  GYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS---GKDRPLLVRQGSV------NSSGKAG 287
            G  G GQLG G     + TP  +  LE  AS   G+   + VR          N SG+ G
Sbjct: 934  GANGSGQLGDGGTAPSL-TPVRVKGLERVASVAAGRAFSVAVRDDGTAWAWGTNPSGQLG 992

Query: 288  ------RSY---------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-LR 331
                  RS          ++ ++ G  H   ++  G + T+G    GQ G GS++   + 
Sbjct: 993  DGTNHARSVPNQVTSLKGIRAMSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMW 1052

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL--LET 389
            P     L    VE +AAG   TV + ++G    +G N++GQLG G    +  P    +E 
Sbjct: 1053 PRQVPELRG--VEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEG 1110

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP- 448
            P +     + V    +H+ V   DG V +WG N +GQLG G +  R +P  + ++G    
Sbjct: 1111 PKIRPP-VRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVP--LTVYGLASV 1167

Query: 449  RNIACGWWHTLLL 461
              ++ G WH+L L
Sbjct: 1168 VAVSSGAWHSLAL 1180



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 117/257 (45%), Gaps = 33/257 (12%)

Query: 213  KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH--AASGKD 270
             +  + +GG H L +   G VW WGY   GQLG G+  +    P  +  LE   A +G D
Sbjct: 1216 DVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGT-AESRSLPTRVEGLEGVVAVAGGD 1274

Query: 271  RPLLV--RQGSV-----NSSGK----AGRSYVKEIA-----------CGGRHSAVVTDAG 308
               L     G++     N+SG+     G +    +A            G  H+  +   G
Sbjct: 1275 HYSLALHSDGTLSAWGNNASGQLGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDG 1334

Query: 309  ALLTFGWGLYGQCGHGSTNDQLR--PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
             + T+G   +GQ G G++  ++R  P    +L    V  + AG  HT  ++++G V+ +G
Sbjct: 1335 TVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLS--SVSAVGAGARHTFAVALKGTVWTWG 1392

Query: 367  GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
             N  GQLG G    +N  +     + E     VVS GA  S  +  DG VLSWG + YG 
Sbjct: 1393 RNSHGQLGLG----DNTNRTEPLRVRELSDVTVVSGGADFSLAMKRDGTVLSWGSSLYGS 1448

Query: 427  LGLGDSIDRNIPSLVPI 443
            LGLG +  R+ P  V +
Sbjct: 1449 LGLGATGHRSSPGQVAL 1465



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 109/251 (43%), Gaps = 30/251 (11%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH---AASGKDRP 272
           ++AAG +H+L LS  G VW WG  G GQLG          P  +  LE+     SG    
Sbjct: 62  RIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALENIVSVVSGDAHS 121

Query: 273 L-LVRQGSV-----NSSGK---------------AGRSYVKEIACGGRHSAVVTDAGALL 311
           L L   GSV     NSSG+               AG   V  +A G  HS  + + G + 
Sbjct: 122 LALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGLDSVVAVAAGDFHSLALREDGTVW 181

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
            +G   +GQ G G T   L P     L    V  +AAG   T+ +  +G V  +G N  G
Sbjct: 182 AWGTNFHGQLGRGHTQPGLTPEQVPGLNG--VVALAAGFDFTLAVLEDGTVRAWGSNGSG 239

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G     +  +L    + E      V  G  H+  L +DG V +WG N  GQLG G 
Sbjct: 240 QLGDGT----STQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGT 295

Query: 432 SIDRNIPSLVP 442
             DR +P  VP
Sbjct: 296 WNDRAVPMQVP 306


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
           of chromosome condensation (RCC1) domains and a PF|01363
           FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1006

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 41/274 (14%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           SG +F T     V L   + +  VA G  HT I++  GQ++ +G G  G LG GS ++ V
Sbjct: 378 SGSQFLTRKISDV-LGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGS-LESV 435

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------ 307
             P  +  L                         R  V  ++CG  H+A + +       
Sbjct: 436 TKPKEVESLR------------------------RMKVISVSCGPWHTAAIVETANDRKF 471

Query: 308 ------GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
                 G L T+G G  G+ GH  +  +L P+  + L+D    +++ G   TV +S+ G 
Sbjct: 472 YNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGT 531

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           VY  G +  GQLG    + ++V  +L    L  +  K ++ G+ H AVLT  G V +WG 
Sbjct: 532 VYTMGSSIHGQLGCPRAKDKSVNVVLGN--LTRQFVKDIASGSHHVAVLTSFGNVYTWGK 589

Query: 422 NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
              GQLGLGD  DRN P LV P+   L  +IACG
Sbjct: 590 GMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACG 623



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 8/177 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ I+ G +H+A+VT  G +  +G G  G+ G     D   P    SL D+ V  +A   
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSD 353

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQA--ENVPKLLETPILESKRAKVVSCGARHSA 408
             T  ++  G +Y++G +     G  ++Q+  + + + +   +  S     V+CGA H+A
Sbjct: 354 HQTCAVTESGELYLWGID-----GGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTA 408

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           ++T  GQ+ ++G   +G LG G       P  V  +      +++CG WHT  + ET
Sbjct: 409 IVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVET 465



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 119/320 (37%), Gaps = 63/320 (19%)

Query: 65  ATSESGKLITWG----SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
           A +ESG+L  WG    + +  G  +LT            L    +V+  A G  H   VT
Sbjct: 358 AVTESGELYLWGIDGGTIEQSGSQFLTRKISD------VLGGSLTVLSVACGAWHTAIVT 411

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP--------PSDKRA 172
            +G+++T+G          +  FG  G    +S  K   + + +          P    A
Sbjct: 412 SSGQLFTYG----------SGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAA 461

Query: 173 GEEVVKRRKTSSARE----------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
             E    RK  +A+           +       D    L P  VT        KV+ G  
Sbjct: 462 IVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWT 521

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            T+ LS  G V+  G    GQLG                       KD+ + V  G++  
Sbjct: 522 LTVALSISGTVYTMGSSIHGQLG-------------------CPRAKDKSVNVVLGNLT- 561

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                R +VK+IA G  H AV+T  G + T+G G+ GQ G G   D+  P     L D  
Sbjct: 562 -----RQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRL 616

Query: 343 VEQIAAGLWHTVCISVEGRV 362
           VE IA GL  T  I +   +
Sbjct: 617 VESIACGLNLTAAICLHKEI 636



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 6/148 (4%)

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           G  + ND L P    S     V+ I+ G  H   ++ +G V+ +G    G+LG  V+   
Sbjct: 273 GSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDI 332

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN--KYGQLGLGDSIDRNIPS 439
           + PK +E+  LE    + V+C    +  +TE G++  WG +     Q G    + R I  
Sbjct: 333 DHPKRVES--LEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSG-SQFLTRKISD 389

Query: 440 LVPIHGFLPRNIACGWWHTLLLAETTQI 467
           ++        ++ACG WHT ++  + Q+
Sbjct: 390 VLG-GSLTVLSVACGAWHTAIVTSSGQL 416


>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
 gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
          Length = 413

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 114/256 (44%), Gaps = 36/256 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           +AAG  H+  ++  G+ + WG   EGQLGLG R K V   ++ P    + +G        
Sbjct: 118 IAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSV---YITPQKMESLAGMR------ 168

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN--------- 327
                         +K +A G  HS  + + G +L++G   +G  GHG            
Sbjct: 169 --------------LKALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDT 214

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           ++  P     L  +QV  ++AGL H+ C    G +Y FG     QLG G +   + P   
Sbjct: 215 NEYTPRIIHCLEKLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQP--- 271

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
             PI +  R   +SCG  H+  +T+DG + +WG N++G LG G         L  +    
Sbjct: 272 -CPIPDLPRVSSISCGGYHTGAITQDGDIYTWGSNEHGCLGSGFRASSKPLRLESLAEAF 330

Query: 448 PRNIACGWWHTLLLAE 463
              I+CGW HT  +++
Sbjct: 331 MSEISCGWKHTAAISD 346



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 127/278 (45%), Gaps = 51/278 (18%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP--------TPHLIPCL 262
           G+++  +A G  H+L L++ GQV  WG    G LG G               TP +I CL
Sbjct: 166 GMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCL 225

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           E                        +  V+ ++ G  HSA   D+G + +FG G   Q G
Sbjct: 226 E------------------------KLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLG 261

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            G+ ND  +P     L   +V  I+ G +HT  I+ +G +Y +G N+ G LG+G  +A +
Sbjct: 262 LGNNNDASQPCPIPDLP--RVSSISCGGYHTGAITQDGDIYTWGSNEHGCLGSGF-RASS 318

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW------------NKYGQLGLG 430
            P  LE+  L       +SCG +H+A ++ DG + SWGW            +  GQLG+G
Sbjct: 319 KPLRLES--LAEAFMSEISCGWKHTAAIS-DGYIFSWGWGGSYGTYATQAESSGGQLGVG 375

Query: 431 DSIDRNIPSLVPIHGFLPR-NIACGWWHTLLLAETTQI 467
              D   P  + +   L   +++CG+ HT  + E  +I
Sbjct: 376 TDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILEEIEI 413



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 125/273 (45%), Gaps = 47/273 (17%)

Query: 236 WGYGGEGQLGL---GSRIKMVPTPHL---IPCLEHAASGKDRPLLVRQGSV-----NSSG 284
           WG G +G+LGL   GS+ + V    L    PC   +  G    +L  +G V     NSSG
Sbjct: 33  WGNGDQGRLGLSESGSQFEPVLCRALESHEPC-SVSCGGAHTLILTDKGRVFATGLNSSG 91

Query: 285 KAGRSYVKE-----------------IACGGRHSAVVTDAGALLTFGWGLYGQCGHG--S 325
           + G     E                 IA G  HSA +T +G    +G    GQ G G  +
Sbjct: 92  QLGVPLKSESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRA 151

Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG--------- 376
            +  + P    SL  ++++ +A G  H++ ++  G+V  +G N+FG LG G         
Sbjct: 152 KSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFF 211

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            D  E  P+++    LE  + + VS G  HSA   + G + S+G     QLGLG++ D +
Sbjct: 212 KDTNEYTPRIIH--CLEKLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDAS 269

Query: 437 IPSLVPIHGFLPR--NIACGWWHTLLLAETTQI 467
            P  +P    LPR  +I+CG +HT  + +   I
Sbjct: 270 QPCPIPD---LPRVSSISCGGYHTGAITQDGDI 299



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 32/201 (15%)

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           L  +  V  SGKAG+ +V                     +G G  G+ G   +  Q  P 
Sbjct: 13  LTAKNKVEVSGKAGKRWVA-------------------LWGNGDQGRLGLSESGSQFEPV 53

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL----LET 389
              +L   +   ++ G  HT+ ++ +GRV+  G N  GQLG  +    +   +       
Sbjct: 54  LCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKSESSFDPVEVHGFPD 113

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG---DSIDRNIPSLVPIHGF 446
           P +       ++ G  HSA +T  G+   WG N  GQLGLG    S+      +  + G 
Sbjct: 114 PCVH------IAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGM 167

Query: 447 LPRNIACGWWHTLLLAETTQI 467
             + +A G  H+L LAET Q+
Sbjct: 168 RLKALALGTDHSLGLAETGQV 188



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 123/329 (37%), Gaps = 79/329 (24%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGE----TPEPFPLPTEASVVKAAAGWAHCVSVT 120
           A + SG+   WG  + EGQ  L  GK  +    TP+         +   A G  H + + 
Sbjct: 127 AITSSGETYVWGR-NSEGQ--LGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLA 183

Query: 121 EAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           E G+V +WG     C+   ++T  F     F KD         T +  P      E++  
Sbjct: 184 ETGQVLSWGTNRFGCLGHGEMTGFF----DFFKD---------TNEYTPRIIHCLEKLQV 230

Query: 179 RRKT-----SSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGR 222
           R  +     S+  ++S    S           G+      PC +   P  +++ ++ GG 
Sbjct: 231 RSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLP--RVSSISCGGY 288

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           HT  ++  G ++ WG    G LG G R                     +PL +       
Sbjct: 289 HTGAITQDGDIYTWGSNEHGCLGSGFR------------------ASSKPLRLE------ 324

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW----GLY--------GQCGHGSTNDQL 330
                 +++ EI+CG +H+A ++D G + ++GW    G Y        GQ G G+  D  
Sbjct: 325 --SLAEAFMSEISCGWKHTAAISD-GYIFSWGWGGSYGTYATQAESSGGQLGVGTDFDFF 381

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            P        +    ++ G  HT  I  E
Sbjct: 382 EPVPIEMDDRLSALHVSCGFNHTAAILEE 410


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 33/278 (11%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----AAS 267
            +  + AG  H+ ++++ G V+ WG G EGQLG     ++   PH++P +E+      A 
Sbjct: 37  NVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVAC 96

Query: 268 GKDRPLLVRQGSV------NSSGKAGRSYVKE------------------IACGGRHSAV 303
           G++  ++V    +      N +G+ G   +K                   IACG  H+  
Sbjct: 97  GRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVA 156

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           +   G + ++G    GQ GHG+T     P+    +      + A G  HT+ ++   ++Y
Sbjct: 157 ICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIY 216

Query: 364 VFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
            +G N +GQLG    D+A   P +++   L    A  V CG  HS  L ++ Q+ +WG N
Sbjct: 217 AWGSNAYGQLGLNRSDKAVLQPDIVDH--LRRSGACHVLCGYSHSMALMKNEQIYTWGRN 274

Query: 423 KYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
             GQLGLG      +P LV  +     + IACG+ H +
Sbjct: 275 DCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCV 312



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 24/237 (10%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           V+ WG    GQLGLG     VP P                     G ++ S    R  V+
Sbjct: 1   VYSWGKNKYGQLGLG-HTNNVPLP--------------------TGILSLSDPLNRKNVR 39

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-QLRPSYASSLMDIQVEQIAAGLW 351
            I  G  HSAV+ + G + T+G G  GQ GH    + +L P     + +     +A G  
Sbjct: 40  SIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRN 99

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           HTV ++  G +Y +G N+ GQLGTG  ++ N P L+++  L       ++CG  H+  + 
Sbjct: 100 HTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDSA-LNLPSVLSIACGEFHTVAIC 158

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETTQI 467
            +G + SWG N+ GQLG G++     P+ +V +   +    ACG  HTL+L +  +I
Sbjct: 159 IEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKI 215



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 121/348 (34%), Gaps = 50/348 (14%)

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
           G G   +   +E G + TWG   +    +    +    P   P          A G  H 
Sbjct: 42  GAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHT 101

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS-------D 169
           V VT+ G +YTWG              G  G+    S+     + +    PS       +
Sbjct: 102 VVVTDNGLIYTWG----------ENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGE 151

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
                  ++    S  R +      G+      P  V         + A GG+HTL+L+D
Sbjct: 152 FHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTD 211

Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
             +++ WG    GQLGL    K V  P ++  L                         RS
Sbjct: 212 ANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLR------------------------RS 247

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
               + CG  HS  +     + T+G    GQ G G       P   ++L  ++V+QIA G
Sbjct: 248 GACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACG 307

Query: 350 LWHTVCISVE---------GRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             H V    +           VY +G  + GQLG     +   P+++E
Sbjct: 308 YDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355


>gi|27085405|gb|AAN85438.1| inositol 5-phosphatase 2 [Dictyostelium discoideum]
          Length = 1800

 Score =  107 bits (267), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 84/296 (28%), Positives = 135/296 (45%), Gaps = 67/296 (22%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDR 271
           ++  V+ G  HTL+L+   +++  G+   GQLG+ + +   VP P               
Sbjct: 75  RVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLP--------------- 119

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                   V++  K     V +I  G   SA +T+AG L  +G   YGQ G+G  N +L 
Sbjct: 120 --------VDTLSKFN---VIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLH 168

Query: 332 PSYASSLMD---------------IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
               +++++               +Q   I  G  HT+ IS  G ++ +G NQ+GQLG G
Sbjct: 169 SFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLG 228

Query: 377 VDQAENVP--------------------KLLETPILESKRAKVV---SCGARHSAVLTED 413
              A+ VP                    +++ T        ++V   +CG  HSA+LT +
Sbjct: 229 HCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLE 288

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRN-IACGWWHTLLLAETTQI 467
           G +  WG N+YGQLG GDS+D+++P  V     F+  N +A G  HT+LL +   +
Sbjct: 289 GDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDV 344



 Score =  104 bits (260), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 103/358 (28%), Positives = 152/358 (42%), Gaps = 73/358 (20%)

Query: 52  WKD-VCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
           WK  V    CGF    L TSE  K+ + G  +  GQ  + +      P P    ++ +V+
Sbjct: 72  WKRRVVSVSCGFNHTLLLTSEY-KIFSMG-FNQTGQLGIENVVDSAVPLPVDTLSKFNVI 129

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
           K  AG     ++TEAG++Y WG          +  +G  G+  K +    S  PT    P
Sbjct: 130 KIKAGNNVSAAITEAGDLYCWG----------SSAYGQLGN-GKMNAKLHSFTPTTILNP 178

Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
               A               E ++P               +   ++ T +  G +HT+ +
Sbjct: 179 LIPDA---------------EKDDP---------------IYQNLQYTNICFGAQHTIAI 208

Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVPTP-HLIPCLEHAASGKDRPLLVRQGSVNSSG- 284
           S  G ++ WG    GQLGLG    K+VP P HL           D     R G +NS G 
Sbjct: 209 STTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHL-----------DNSFERRAGHINSLGE 257

Query: 285 --------KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYA 335
                   K     V +IACG  HSA++T  G L  +G   YGQ G G + DQ  P +  
Sbjct: 258 IVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVK 317

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---VPKLLETP 390
            SL  +++ ++A G  HT+ ++ E  V+ FG N+F QLG G    +N    P  ++ P
Sbjct: 318 GSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQKP 375



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 44/252 (17%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI----KMVPTPHLIPCLEHAASGK 269
           + K+ AG   +  +++ G ++ WG    GQLG G          PT  L P +  A   K
Sbjct: 128 VIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAE--K 185

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
           D P+       N            I  G +H+  ++  GA+ ++G   YGQ G G  N +
Sbjct: 186 DDPIYQNLQYTN------------ICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAK 233

Query: 330 LRP-------------SYASSLMDIQ------------VEQIAAGLWHTVCISVEGRVYV 364
           L P              + +SL +I             V  IA G +H+  +++EG +++
Sbjct: 234 LVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFL 293

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G NQ+GQLG G    ++VPK ++   LE  +   ++ G  H+ +LT++  V ++G N++
Sbjct: 294 WGSNQYGQLGQGDSLDQSVPKTVKGS-LEFVKINRMALGNNHTILLTKEQDVFTFGSNEF 352

Query: 425 GQLGLGDSIDRN 436
            QLG G    +N
Sbjct: 353 YQLGHGSIGGKN 364



 Score = 49.3 bits (116), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 15/129 (11%)

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           L T+G G  G   H    D+  PS  S L+ + ++Q++ G  H+  I V     ++G   
Sbjct: 4   LYTWGKGKTGNTCHNI--DKKYPSPPSVLISLNLDQLSMGPNHSAAI-VNNECLMWG-EV 59

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+  T + +           I+  +R   VSCG  H+ +LT + ++ S G+N+ GQLG+
Sbjct: 60  MGRKHTTLFK-----------IVWKRRVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGI 108

Query: 430 GDSIDRNIP 438
            + +D  +P
Sbjct: 109 ENVVDSAVP 117


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 135/288 (46%), Gaps = 32/288 (11%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL---GSRIKMVPTPH 257
           L P  +      +I ++A G  +T++++  GQV+  G    GQLG      R++++P   
Sbjct: 100 LVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRLQLIPGLD 159

Query: 258 LIPCLEHAASGKDRPLLVR--------------QGSVNSSG----------KAGRSYVKE 293
                +  A G    L V               Q  +NS              G S V +
Sbjct: 160 AF-VFKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQ 218

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWH 352
           +ACG  H   +T+ G L ++G    GQ G G+   ++++P   SSL  + +  I  G +H
Sbjct: 219 VACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYH 278

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           ++ IS  G V+ +G N FGQLG    +  N+P+ L+T  L++ +    +CG   S  LT 
Sbjct: 279 SMAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQT--LQNAKVCYAACGEEFSVFLTV 336

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTL 459
           DG V + G   YGQLG G++ +  +P  ++ + G     I+CG  HTL
Sbjct: 337 DGGVFTCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTL 384



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 133/275 (48%), Gaps = 41/275 (14%)

Query: 206 VTLNPGVK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           + L PG+      KVA G  HTL +++ GQ++ WG   EGQLGL S+  +   PH++  L
Sbjct: 152 LQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRAL 211

Query: 263 -----EHAASGKDRPL-LVRQGSV-----NSSGKAG-----RSYVKE------------- 293
                   A G +  L L   G +     NS G+ G     ++ +K              
Sbjct: 212 GTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAF 271

Query: 294 IACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           I CGG HS  ++ +GA+  FGWG   +GQ G   T ++  P    +L + +V   A G  
Sbjct: 272 ITCGGYHSMAISKSGAV--FGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEE 329

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA-VL 410
            +V ++V+G V+  G   +GQLG G    E +P+  +   L       +SCG RH+  ++
Sbjct: 330 FSVFLTVDGGVFTCGAGMYGQLGHGNTSNEILPR--QVMELMGSTVTQISCGKRHTLGLV 387

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG 445
              G+V +WG    GQ  LG++I R++ +   +HG
Sbjct: 388 PSRGRVYAWGLGGAGQ--LGNNITRSVATPQVVHG 420



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 94/192 (48%), Gaps = 16/192 (8%)

Query: 285 KAGRSYVKEIACG---GRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQ--LRPSYASS 337
            A R+  + +AC        + VTD      F WG  ++G+ G G   D+  L P     
Sbjct: 51  NANRNKKRRLACEPIIAVEYSTVTDKNM---FCWGSTIHGELGLGGIEDENILVPRELDF 107

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
               ++EQIA G  +TV I+ +G+VY  G N +GQLG      +   +L   P L++   
Sbjct: 108 QKATEIEQIACGENYTVLITRDGQVYSCGNNDYGQLG----HEKGRKRLQLIPGLDAFVF 163

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGF-LPRNIACGW 455
           K V+CGA H+  + E GQ+ SWG N  GQLGL   ++   +P +V   G  +   +ACG 
Sbjct: 164 KKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGI 223

Query: 456 WHTLLLAETTQI 467
            H L L    ++
Sbjct: 224 NHVLALTNNGKL 235



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCV 117
           G    LA +E G+L +WGS + EGQ  L S    E  P        + VV+ A G  H +
Sbjct: 169 GAHHTLAVNEWGQLFSWGS-NAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVL 227

Query: 118 SVTEAGEVYTWG 129
           ++T  G++Y+WG
Sbjct: 228 ALTNNGKLYSWG 239


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 121/275 (44%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ +   G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVDQAEN-----VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D  +      +  LL  P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDYKKQASPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR  P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 173/429 (40%), Gaps = 101/429 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +     G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLHDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-----P 442
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V     P
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFP 347

Query: 443 IHGFLPRNI 451
            +G  P +I
Sbjct: 348 YNGQCPTDI 356



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           LSPC V+ N    K   VA G  H+++L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 115 LSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQ-PIPRKV 173

Query: 260 -PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 174 TSCLQNKT------------------------VIGIACGQMSSMAVVDNGEVYAWGYNGN 209

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+VEQ+  G  HT+ ++ EG +Y +G N +GQLGTG  
Sbjct: 210 GQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNK 269

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P  ++  + + +  ++ +C + H SA  ++ GQV  WG
Sbjct: 270 SNQSYP--VQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 127/278 (45%), Gaps = 32/278 (11%)

Query: 172 AGEEVVKRRKTSSAREESENPA----SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLI 226
           AG EV+   K         N +    +GD    L P  + +  G +I  ++ G G H +I
Sbjct: 29  AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVI 88

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           ++  G+V+ WG+    QLG GS         L PC               Q S N   K 
Sbjct: 89  VTSDGEVYSWGHNAYSQLGNGS-----TNQALSPC---------------QVSTNLINKK 128

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQ 345
             S    +ACG  HS V+T  G +  +G+   GQ G GST +Q  P   +S L +  V  
Sbjct: 129 AIS----VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG 184

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           IA G   ++ +   G VY +G N  GQLG G   + N P       L+  R + V CG  
Sbjct: 185 IACGQMSSMAVVDNGEVYAWGYNGNGQLGLG--SSGNQPTPCRIAALQGIRVEQVVCGYA 242

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           H+  LT++G + +WG N YGQLG G+  +++ P  V +
Sbjct: 243 HTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIV 280



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 27/249 (10%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           V   G   L L+   +V+  G    G LG G   + +  P  I  L    SGK R + + 
Sbjct: 26  VFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDA-QSILEPRRIDML----SGK-RIVSLS 79

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
            GS                  G H  +VT  G + ++G   Y Q G+GSTN  L P   S
Sbjct: 80  YGS------------------GPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS 121

Query: 337 S-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           + L++ +   +A G  H++ ++ +G VY +G N  GQ+G+G    + +P+ + T  L++K
Sbjct: 122 TNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKV-TSCLQNK 180

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACG 454
               ++CG   S  + ++G+V +WG+N  GQLGLG S ++  P  +  + G     + CG
Sbjct: 181 TVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCG 240

Query: 455 WWHTLLLAE 463
           + HTL L +
Sbjct: 241 YAHTLALTD 249



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 4/174 (2%)

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVC 355
            G     +T    +   G    G  G G     L P     L   ++  ++ G   H V 
Sbjct: 29  AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVI 88

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++ +G VY +G N + QLG G       P  + T ++ +K+A  V+CG+ HS VLT DG+
Sbjct: 89  VTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLI-NKKAISVACGSHHSMVLTCDGE 147

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
           V +WG+N  GQ+G G + ++ IP  V   +       IACG   ++ + +  ++
Sbjct: 148 VYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEV 201



 Score = 44.7 bits (104), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           VY WGY   G     S    PIP ++      K V G  CG   ++A  ++G++  WG  
Sbjct: 148 VYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGY- 206

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V +   G+AH +++T+ G +Y WG
Sbjct: 207 --NGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWG 257


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           LSPC V+ N    K   VA G  H+++L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 115 LSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQ-PIPRKV 173

Query: 260 -PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 174 TSCLQNKT------------------------VIGIACGQMSSMAVVDNGEVYAWGYNGN 209

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+VEQ+  G  HT+ ++ EG +Y +G N +GQLGTG  
Sbjct: 210 GQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNK 269

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P  ++  + + +  ++ +C + H SA  ++ GQV  WG
Sbjct: 270 SNQSYP--VQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 127/278 (45%), Gaps = 32/278 (11%)

Query: 172 AGEEVVKRRKTSSAREESENPA----SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLI 226
           AG EV+   K         N +    +GD    + P  + +  G +I  ++ G G H +I
Sbjct: 29  AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVI 88

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           ++  G+V+ WG+    QLG GS         L PC               Q S N   K 
Sbjct: 89  VTSDGEVYSWGHNAYSQLGNGS-----TNQALSPC---------------QVSTNLINKK 128

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQ 345
             S    +ACG  HS V+T  G +  +G+   GQ G GST +Q  P   +S L +  V  
Sbjct: 129 AIS----VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG 184

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           IA G   ++ +   G VY +G N  GQLG G   + N P       L+  R + V CG  
Sbjct: 185 IACGQMSSMAVVDNGEVYAWGYNGNGQLGLG--SSGNQPTPCRIAALQGIRVEQVVCGYA 242

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           H+  LT++G + +WG N YGQLG G+  +++ P  V +
Sbjct: 243 HTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIV 280



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 27/249 (10%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           V   G   L L+   +V+  G    G LG G    ++  P  I  L    SGK R + + 
Sbjct: 26  VFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIIE-PRRIDML----SGK-RIVSLS 79

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
            GS                  G H  +VT  G + ++G   Y Q G+GSTN  L P   S
Sbjct: 80  YGS------------------GPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS 121

Query: 337 S-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           + L++ +   +A G  H++ ++ +G VY +G N  GQ+G+G    + +P+ + T  L++K
Sbjct: 122 TNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKV-TSCLQNK 180

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACG 454
               ++CG   S  + ++G+V +WG+N  GQLGLG S ++  P  +  + G     + CG
Sbjct: 181 TVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCG 240

Query: 455 WWHTLLLAE 463
           + HTL L +
Sbjct: 241 YAHTLALTD 249



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 3/118 (2%)

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           H V ++ +G VY +G N + QLG G       P  + T ++ +K+A  V+CG+ HS VLT
Sbjct: 85  HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLI-NKKAISVACGSHHSMVLT 143

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
            DG+V +WG+N  GQ+G G + ++ IP  V   +       IACG   ++ + +  ++
Sbjct: 144 CDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEV 201



 Score = 44.7 bits (104), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           VY WGY   G     S    PIP ++      K V G  CG   ++A  ++G++  WG  
Sbjct: 148 VYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGY- 206

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V +   G+AH +++T+ G +Y WG
Sbjct: 207 --NGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWG 257


>gi|66809941|ref|XP_638694.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
 gi|60467249|gb|EAL65282.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
          Length = 1800

 Score =  107 bits (267), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 84/296 (28%), Positives = 135/296 (45%), Gaps = 67/296 (22%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDR 271
           ++  V+ G  HTL+L+   +++  G+   GQLG+ + +   VP P               
Sbjct: 75  RVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLP--------------- 119

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                   V++  K     V +I  G   SA +T+AG L  +G   YGQ G+G  N +L 
Sbjct: 120 --------VDTLSKFN---VIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLH 168

Query: 332 PSYASSLMD---------------IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
               +++++               +Q   I  G  HT+ IS  G ++ +G NQ+GQLG G
Sbjct: 169 SFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLG 228

Query: 377 VDQAENVP--------------------KLLETPILESKRAKVV---SCGARHSAVLTED 413
              A+ VP                    +++ T        ++V   +CG  HSA+LT +
Sbjct: 229 HCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLE 288

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRN-IACGWWHTLLLAETTQI 467
           G +  WG N+YGQLG GDS+D+++P  V     F+  N +A G  HT+LL +   +
Sbjct: 289 GDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDV 344



 Score =  104 bits (260), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 103/358 (28%), Positives = 152/358 (42%), Gaps = 73/358 (20%)

Query: 52  WKD-VCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
           WK  V    CGF    L TSE  K+ + G  +  GQ  + +      P P    ++ +V+
Sbjct: 72  WKRRVVSVSCGFNHTLLLTSEY-KIFSMG-FNQTGQLGIENVVDSAVPLPVDTLSKFNVI 129

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
           K  AG     ++TEAG++Y WG          +  +G  G+  K +    S  PT    P
Sbjct: 130 KIKAGNNVSAAITEAGDLYCWG----------SSAYGQLGN-GKMNAKLHSFTPTTILNP 178

Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
               A               E ++P               +   ++ T +  G +HT+ +
Sbjct: 179 LIPDA---------------EKDDP---------------IYQNLQYTNICFGAQHTIAI 208

Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVPTP-HLIPCLEHAASGKDRPLLVRQGSVNSSG- 284
           S  G ++ WG    GQLGLG    K+VP P HL           D     R G +NS G 
Sbjct: 209 STTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHL-----------DNSFERRAGHINSLGE 257

Query: 285 --------KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYA 335
                   K     V +IACG  HSA++T  G L  +G   YGQ G G + DQ  P +  
Sbjct: 258 IVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVK 317

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---VPKLLETP 390
            SL  +++ ++A G  HT+ ++ E  V+ FG N+F QLG G    +N    P  ++ P
Sbjct: 318 GSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQKP 375



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 44/252 (17%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI----KMVPTPHLIPCLEHAASGK 269
           + K+ AG   +  +++ G ++ WG    GQLG G          PT  L P +  A   K
Sbjct: 128 VIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAE--K 185

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
           D P+       N            I  G +H+  ++  GA+ ++G   YGQ G G  N +
Sbjct: 186 DDPIYQNLQYTN------------ICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAK 233

Query: 330 LRP-------------SYASSLMDIQ------------VEQIAAGLWHTVCISVEGRVYV 364
           L P              + +SL +I             V  IA G +H+  +++EG +++
Sbjct: 234 LVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFL 293

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G NQ+GQLG G    ++VPK ++   LE  +   ++ G  H+ +LT++  V ++G N++
Sbjct: 294 WGSNQYGQLGQGDSLDQSVPKTVKGS-LEFVKINRMALGNNHTILLTKEQDVFTFGSNEF 352

Query: 425 GQLGLGDSIDRN 436
            QLG G    +N
Sbjct: 353 YQLGHGSIGGKN 364



 Score = 49.3 bits (116), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 15/129 (11%)

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           L T+G G  G   H    D+  PS  S L+ + ++Q++ G  H+  I V     ++G   
Sbjct: 4   LYTWGKGKTGNTCHNI--DKKYPSPPSVLISLNLDQLSMGPNHSAAI-VNNECLMWG-EV 59

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+  T + +           I+  +R   VSCG  H+ +LT + ++ S G+N+ GQLG+
Sbjct: 60  MGRKHTTLFK-----------IVWKRRVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGI 108

Query: 430 GDSIDRNIP 438
            + +D  +P
Sbjct: 109 ENVVDSAVP 117


>gi|147784312|emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 130/259 (50%), Gaps = 30/259 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGK 269
           G++I + AAG   T+++SD GQV+ +G    G+   G +  K+V TP L+  L++     
Sbjct: 198 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNI---- 253

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                               +V + A G   +AV++  G + TF WG   + GH +  + 
Sbjct: 254 --------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEAND 293

Query: 330 LRPS-YASSLMDIQVEQIAAGLWHTVCISVEGR---VYVFGGNQFGQLGTGVDQAENVPK 385
           L P     +L +I V QIAAG  + + ++ +     VY  G    G+LG G    E  P+
Sbjct: 294 LEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPR 353

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIH 444
           L+E   + + +  VV+ GA H+AV+  DG+V +WGW +YG LG G+    ++P +V  + 
Sbjct: 354 LIEQFQILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALI 413

Query: 445 GFLPRNIACGWWHTLLLAE 463
                ++A G + T ++++
Sbjct: 414 NVKAVHVATGDYTTFVVSD 432



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 163/380 (42%), Gaps = 84/380 (22%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHC 116
           G G ++A +  G + ++GS +  GQ  L  G   E   P  + +     +++AAAG    
Sbjct: 155 GPGHSIAVTVKGAVYSFGS-NSSGQ--LGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRT 211

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           + +++AG+VY +G                     KDS G                     
Sbjct: 212 MLISDAGQVYAFG---------------------KDSFG--------------------- 229

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
                      E+E    G +  T +P LV     + + + A G   T +LS  G+V+ +
Sbjct: 230 -----------EAEYGVQGTKLVT-TPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 277

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
            +G + +LG  +    +    L+  LE+       P++           AG  Y+  +AC
Sbjct: 278 SWGNDAKLGHQTEANDLEPHPLLGALENI------PVV--------QIAAGYCYLLALAC 323

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS--SLMDIQVEQIAAGLWHTV 354
                    +  ++ + G GL G+ GHG+  D+  P       ++++Q   +AAG WH  
Sbjct: 324 Q-------PNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAA 376

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
            +  +GRV  +G  ++G LG G ++ E+VPK++E  I  + +A  V+ G   + V+++DG
Sbjct: 377 VVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALI--NVKAVHVATGDYTTFVVSDDG 434

Query: 415 QVLSWGWNKYGQLGLGDSID 434
            V S+G  +   LG  +  D
Sbjct: 435 DVYSFGCGESSSLGHNNGPD 454



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 10/169 (5%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT  GA+ +FG    GQ GHG+T+++ RP    SL  I++ Q AAG   T+ IS  
Sbjct: 158 HSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDA 217

Query: 360 GRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           G+VY FG + FG+   GV   + V  P+L+E+  L++      + G   +AVL+ +G+V 
Sbjct: 218 GQVYAFGKDSFGEAEYGVQGTKLVTTPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 275

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLLA 462
           ++ W    +LG     +   P   P+ G L       IA G+ + L LA
Sbjct: 276 TFSWGNDAKLGHQTEANDLEPH--PLLGALENIPVVQIAAGYCYLLALA 322



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ ++V+G VY FG N  GQLG G    E  P+ + +  LE  R    + GA
Sbjct: 151 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRS--LEGIRIIQAAAGA 208

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLG 430
             + ++++ GQV ++G + +G+   G
Sbjct: 209 GRTMLISDAGQVYAFGKDSFGEAEYG 234


>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
           [Desmodus rotundus]
          Length = 511

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 122/252 (48%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 67  GDIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGT----- 121

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H  +PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 122 -TNHGSVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 161

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G    GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G N  G
Sbjct: 162 WGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNG 221

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G     + P       L+  R + V+CG  H+ VLT+DGQV +WG N YGQLG G+
Sbjct: 222 QLGLGSSGNHSTP--CRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGN 279

Query: 432 SIDRNIPSLVPI 443
             +++ P+ V +
Sbjct: 280 KSNQSYPTPVVV 291



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN    P + S+ L + QV ++
Sbjct: 84  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEV 143

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L+++    ++CG   
Sbjct: 144 ACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQPIPRRV-TGCLQNRVVVNIACGQMC 202

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETT 465
           S  + + G+V  WG+N  GQLGLG S + + P  +  + G   + +ACG+ HTL+L +  
Sbjct: 203 SMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDG 262

Query: 466 QI 467
           Q+
Sbjct: 263 QV 264



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 111/223 (49%), Gaps = 34/223 (15%)

Query: 203 PCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP- 260
           PC ++ N   K + +VA G  H+L+L+  G+V+ WG    GQ+G GS     P P  +  
Sbjct: 128 PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQ-PIPRRVTG 186

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
           CL++                          V  IACG   S  V D+G +  +G+   GQ
Sbjct: 187 CLQNRV------------------------VVNIACGQMCSMAVVDSGEVYVWGYNGNGQ 222

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            G GS+ +   P   ++L  I+V+++A G  HT+ ++ +G+VY +G N +GQLGTG    
Sbjct: 223 LGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSN 282

Query: 381 ENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
           ++ P    TP++  K    ++ +C + H SA  T+ G V  WG
Sbjct: 283 QSYP----TPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 321



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 97/238 (40%), Gaps = 42/238 (17%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       + L +G       P  
Sbjct: 75  PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYNQLGNGTTNHGSVPCH 130

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG               ++G     ST  
Sbjct: 131 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCN-------------NSGQVGSGSTAN 177

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
           Q  +P         R    +   +  S A  +S                 +SG+     +
Sbjct: 178 Q-PIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHS---T 233

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           PC +    G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++     PTP ++
Sbjct: 234 PCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 291



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)

Query: 41  PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
           PIP R+ G    + V    CG   ++A  +SG++  WG  +  GQ  L S  +  TP   
Sbjct: 179 PIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWG-YNGNGQLGLGSSGNHSTPCRI 237

Query: 99  PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
                  V + A G+AH + +T+ G+VY WG
Sbjct: 238 AALQGIRVQRVACGYAHTLVLTDDGQVYAWG 268


>gi|225424560|ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
           [Vitis vinifera]
 gi|296081404|emb|CBI16837.3| unnamed protein product [Vitis vinifera]
          Length = 534

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 130/259 (50%), Gaps = 30/259 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGK 269
           G++I + AAG   T+++SD GQV+ +G    G+   G +  K+V TP L+  L++     
Sbjct: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNI---- 251

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                               +V + A G   +AV++  G + TF WG   + GH +  + 
Sbjct: 252 --------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEAND 291

Query: 330 LRPS-YASSLMDIQVEQIAAGLWHTVCISVEGR---VYVFGGNQFGQLGTGVDQAENVPK 385
           L P     +L +I V QIAAG  + + ++ +     VY  G    G+LG G    E  P+
Sbjct: 292 LEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPR 351

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIH 444
           L+E   + + +  VV+ GA H+AV+  DG+V +WGW +YG LG G+    ++P +V  + 
Sbjct: 352 LIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALI 411

Query: 445 GFLPRNIACGWWHTLLLAE 463
                ++A G + T ++++
Sbjct: 412 NVKAVHVATGDYTTFVVSD 430



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 10/169 (5%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT  GA+ +FG    GQ GHG+T+++ RP    SL  I++ Q AAG   T+ IS  
Sbjct: 156 HSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDA 215

Query: 360 GRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           G+VY FG + FG+   GV   + V  P+L+E+  L++      + G   +AVL+ +G+V 
Sbjct: 216 GQVYAFGKDSFGEAEYGVQGTKLVTTPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 273

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLLA 462
           ++ W    +LG     +   P   P+ G L       IA G+ + L LA
Sbjct: 274 TFSWGNDAKLGHQTEANDLEPH--PLLGALENIPVVQIAAGYCYLLALA 320



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 169/436 (38%), Gaps = 108/436 (24%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHC 116
           G G ++A +  G + ++GS +  GQ  L  G   E   P  + +     +++AAAG    
Sbjct: 153 GPGHSIAVTVKGAVYSFGS-NSSGQ--LGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRT 209

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           + +++AG+VY +G                     KDS G                     
Sbjct: 210 MLISDAGQVYAFG---------------------KDSFG--------------------- 227

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
                      E+E    G +  T +P LV     + + + A G   T +LS  G+V+ +
Sbjct: 228 -----------EAEYGVQGTKLVT-TPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275

Query: 237 GYGGEGQLGLGSRIK-MVPTPHL-----IPCLEHAA--------SGKDRPLLVRQGSVNS 282
            +G + +LG  +    + P P L     IP ++ AA        + +   + V       
Sbjct: 276 SWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGL 335

Query: 283 SGKAGRSYVKE-------------------IACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
            GK G     +                   +A G  H+AVV   G + T+GWG YG  GH
Sbjct: 336 GGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGH 395

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG-------GNQFGQLGTG 376
           G+   +  P    +L++++   +A G + T  +S +G VY FG       G+  G  G G
Sbjct: 396 GNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQG 455

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGAR------HSAVLTEDGQVLSWGWNKYGQLG-- 428
              A  +   L T + + K   V            H+  LTE G++ ++G    GQLG  
Sbjct: 456 NRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVE 515

Query: 429 -LGDSIDRNIPSLVPI 443
            + +  +R  P  V I
Sbjct: 516 LVANQTERGNPERVDI 531



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ ++V+G VY FG N  GQLG G    E  P+ + +  LE  R    + GA
Sbjct: 149 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRS--LEGIRIIQAAAGA 206

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLG 430
             + ++++ GQV ++G + +G+   G
Sbjct: 207 GRTMLISDAGQVYAFGKDSFGEAEYG 232


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 118/254 (46%), Gaps = 32/254 (12%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L              
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK---------- 129

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYA 335
                         + +++CG  HS  ++    + ++G   +GQ G G     Q  P   
Sbjct: 130 --------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---- 391
            SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NVP     P+    
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS---GRNVPVQSNKPLSVGA 232

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
           L++     +SCG  H+AVLT+DG+V ++G N+ GQLG   + ++  P LV     L   I
Sbjct: 233 LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQI 292

Query: 452 ACGWWHTLLLAETT 465
            CG +HTL    TT
Sbjct: 293 DCGSYHTLAYVHTT 306



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 36/222 (16%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           ++TLN  +KI +V+ G  H+L LS   QV+ WG    GQLGLG       +P  +  LE 
Sbjct: 122 IMTLN-DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEG 180

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCG 322
                  PL                   ++A GG HS  ++  G   +FGWG    GQ  
Sbjct: 181 I------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNSAGQLA 214

Query: 323 HGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
               N  +   +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N+ GQLG     
Sbjct: 215 LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTP 274

Query: 380 AENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
            +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 275 EKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 7/164 (4%)

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
           G D   L R+ +  S G    + + + A G RHS ++     +L+ G    GQ G     
Sbjct: 6   GADSRELQRRRTAGSPG----AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQ 61

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKL 386
               P    +L  + V+ ++ G  H++ +  +GRV+ +G    GQLG G   +    PK 
Sbjct: 62  RGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKK 121

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           + T  L   +   VSCG  HS  L++D QV SWG N +GQLGLG
Sbjct: 122 IMT--LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 163



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG    Q   +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLIVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      ++ ++      ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|330837692|ref|YP_004412333.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
           17374]
 gi|329749595|gb|AEC02951.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
           DSM 17374]
          Length = 707

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 124/256 (48%), Gaps = 33/256 (12%)

Query: 212 VKITKVAA---GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           VK+T VAA   G  HTLIL   G +W  GY G GQLG G+ I                  
Sbjct: 390 VKMTDVAAVFAGETHTLILKKDGTLWATGYNGVGQLGDGTII------------------ 431

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
            D+ + V+   V        + VK ++ G  H+ ++   G L   G+   GQ G G+ ++
Sbjct: 432 -DKTIPVQ---VKDDAGGFMTGVKAVSAGAAHTMILKKDGTLWATGFNSNGQLGIGNNDN 487

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           +  P   +S MD  V  ++ G  HT+ +   G ++  G N  GQLG G +   N P+   
Sbjct: 488 KDTPVQVAS-MDSDVAAVSTGELHTMILKKNGTLWATGYNASGQLGDGYNTERNTPE--- 543

Query: 389 TPILESKRAKVVSCGARHSAVLTE-DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
             ++E+  A  V  G  H+ +L E DG + + G N YGQLG+GD+  R+ P+ V   G  
Sbjct: 544 -QVMENVAA--VFAGVGHTMILKEEDGTLWATGSNGYGQLGVGDNDGRSTPAQVTSMGSD 600

Query: 448 PRNIACGWWHTLLLAE 463
              ++ GW HT++L E
Sbjct: 601 VAVVSGGWGHTIILKE 616



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 29/246 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASGK 269
           +  V+AG  HT+IL   G +W  G+   GQLG+G+      TP  +  ++      ++G+
Sbjct: 450 VKAVSAGAAHTMILKKDGTLWATGFNSNGQLGIGNNDNK-DTPVQVASMDSDVAAVSTGE 508

Query: 270 DRPLLVRQGSV------NSSGKAGRSY-------------VKEIACGGRHSAVVTDA-GA 309
              +++++         N+SG+ G  Y             V  +  G  H+ ++ +  G 
Sbjct: 509 LHTMILKKNGTLWATGYNASGQLGDGYNTERNTPEQVMENVAAVFAGVGHTMILKEEDGT 568

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           L   G   YGQ G G  + +  P+  +S M   V  ++ G  HT+ +  +G ++  G N 
Sbjct: 569 LWATGSNGYGQLGVGDNDGRSTPAQVTS-MGSDVAVVSGGWGHTIILKEDGLLWATGYNG 627

Query: 370 FGQLGTGVDQAENVP-KLLETPILESKRAKVV--SCGARHSAVLTEDGQVLSWGWNKYGQ 426
            G+LG G       P ++  +  L      VV  S G  H+ +L +DG + + G N +GQ
Sbjct: 628 SGELGDGTMINSKTPVQVKASTTLGDFMTDVVAVSAGMNHTIILKKDGTLWATGHNGFGQ 687

Query: 427 LGLGDS 432
           LGLGDS
Sbjct: 688 LGLGDS 693



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 7/128 (5%)

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL-ETPILESKRAKV 399
           ++V+ ++AG +HT+ +  +G ++  G N++GQLG G     + P+ + ++P    K   V
Sbjct: 336 VRVKSVSAGGYHTMILKTDGTLWATGNNEYGQLGVGDTTNRSTPEQVWDSPDGSVKMTDV 395

Query: 400 --VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH--GFLP--RNIAC 453
             V  G  H+ +L +DG + + G+N  GQLG G  ID+ IP  V     GF+   + ++ 
Sbjct: 396 AAVFAGETHTLILKKDGTLWATGYNGVGQLGDGTIIDKTIPVQVKDDAGGFMTGVKAVSA 455

Query: 454 GWWHTLLL 461
           G  HT++L
Sbjct: 456 GAAHTMIL 463


>gi|332025816|gb|EGI65973.1| X-linked retinitis pigmentosa GTPase regulator [Acromyrmex
           echinatior]
          Length = 771

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 125/267 (46%), Gaps = 44/267 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G +I ++AAG  H++ L+  G V  WG   EGQLGL     +V  P  +P  E       
Sbjct: 190 GPRIIQLAAGSHHSMALTSDGGVVAWGSNLEGQLGLPEISGLVYKPMKVPIPE------- 242

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                               VKEI+ G  HS  +T++G +   G    G+ G       L
Sbjct: 243 -------------------PVKEISAGYYHSVFLTESGLIYICGESESGKLG-------L 276

Query: 331 RPSYASSLMDIQVE------QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-V 383
             ++++ +   Q++       +A G  HT  ++  G +Y  G N  GQLG G++  E   
Sbjct: 277 NINFSTQVAPKQMQLPAPALHVACGGHHTFILAENGNIYCSGSNASGQLGMGINVNETPT 336

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL--- 440
           PKLL    L+ ++   + CG  HSA+LTE G++ + G  ++G+LGL ++ + N+  +   
Sbjct: 337 PKLLPRGALQDEKIIKIVCGESHSAILTESGKLFTCGDGRHGKLGLEEN-ENNVHEVTFA 395

Query: 441 VPIHGFLPRNIACGWWHTLLLAETTQI 467
           V        N+ACG  HT+L+    +I
Sbjct: 396 VKYQELFVSNVACGGCHTILVGRRHEI 422



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 91/179 (50%), Gaps = 13/179 (7%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           I CG  HSAVV   G L  FG   +GQ G G  N   +PS    L   +V  +A G  HT
Sbjct: 87  IECGDEHSAVVCQTGRLFIFGSNDWGQLGLGHRNHISKPSCVKILKPERVTHVACGRAHT 146

Query: 354 VCISVEGRVYVFGGNQFGQLG---TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           +  +   +++  G NQ GQLG   + +  + + P L+    L   R   ++ G+ HS  L
Sbjct: 147 LICTGAQKIFACGSNQEGQLGRENSVIGDSSSSPILIYDCGLAGPRIIQLAAGSHHSMAL 206

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLP---RNIACGWWHTLLLAET 464
           T DG V++WG N  GQLGL +     I  LV  P+   +P   + I+ G++H++ L E+
Sbjct: 207 TSDGGVVAWGSNLEGQLGLPE-----ISGLVYKPMKVPIPEPVKEISAGYYHSVFLTES 260



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 17/115 (14%)

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           GL     I   G V+  G ++F         A+N+        +      ++ CG  HSA
Sbjct: 48  GLPDIETIPETGAVFTIGRSRF---------ADNIASHF---FIRKDPVVIIECGDEHSA 95

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLL 460
           V+ + G++  +G N +GQLGLG     + PS V I    P    ++ACG  HTL+
Sbjct: 96  VVCQTGRLFIFGSNDWGQLGLGHRNHISKPSCVKI--LKPERVTHVACGRAHTLI 148


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 121/275 (44%), Gaps = 40/275 (14%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ +   G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVDQAEN-----VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D  +      +  LL  P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDYKKQASPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            D  DR  P+L+  +       I CG  HT  L +
Sbjct: 225 NDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTK 259



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 173/429 (40%), Gaps = 101/429 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +     G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLHDGTVYTCG-CNDLGQ--LGHEKS 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           DS G+   L +E+           V +  K+ S                           
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P LI  L         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  ++ ++A GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   ++  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-----P 442
              L       ++CG +H SA +   G++ S+G    GQLG G + +R  P  V     P
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFP 347

Query: 443 IHGFLPRNI 451
            +G  P +I
Sbjct: 348 YNGQCPTDI 356



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    VSCG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158


>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
          Length = 815

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 135/293 (46%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  +    +   P   S + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E   PK++E   +  +    +SCG  H+A++T+
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHTALITD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  +  IP+L      F+ + +ACG  H ++ A
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   ++     E K  K +S G+  SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHSAFVT 206



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 42/281 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ +++   +++ +G    GQLGLGS+   +  P  +  L     + AA G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                     +K+++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  + ++   P   +  +   V  I+ G +H+  ++ +G +YVFG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 368 NQFGQLGTGVDQAEN--VPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            + G+LG       N   P+L+ E P    ++   V+CG  H+ VLTE+  V ++G  ++
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIP----EKVIQVACGGEHTVVLTENA-VYTFGLGQF 271

Query: 425 GQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           GQLGLG  + + + P ++  I       I+CG  HT L+ +
Sbjct: 272 GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITD 312



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 28/162 (17%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P LV+  P  K+ +VA GG HT++L++   V+ +G G  GQLGLG+ +     P +I  
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           +      +D+ +               SY   I+CG  H+A++TD G + TFG G +G+ 
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGKL 327

Query: 322 GHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           G G  N  +   P+  S+ +   V+ +A G  H V  +   R
Sbjct: 328 GLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHR 369


>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
          Length = 815

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 135/293 (46%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  +    +   P   S + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E   PK++E   +  +    +SCG  H+A++T+
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHTALITD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  +  IP+L      F+ + +ACG  H ++ A
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   ++     E K  K +S G+  SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHSAFVT 206



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 42/281 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ +++   +++ +G    GQLGLGS+   V  P  +  L     + AA G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                     +K+++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  + ++   P   +  +   V  I+ G +H+  ++ +G +YVFG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 368 NQFGQLGTGVDQAEN--VPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            + G+LG       N   P+L+ E P    ++   V+CG  H+ VLTE+  V ++G  ++
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIP----EKVIQVACGGEHTVVLTENA-VYTFGLGQF 271

Query: 425 GQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           GQLGLG  + + + P ++  I       I+CG  HT L+ +
Sbjct: 272 GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITD 312



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 28/162 (17%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P LV+  P  K+ +VA GG HT++L++   V+ +G G  GQLGLG+ +     P +I  
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           +      +D+ +               SY   I+CG  H+A++TD G + TFG G +G+ 
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGKL 327

Query: 322 GHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           G G  N  +   P+  S+ +   V+ +A G  H V  +   R
Sbjct: 328 GLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHR 369


>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Glycine max]
          Length = 474

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 150/356 (42%), Gaps = 54/356 (15%)

Query: 95  PEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
           PE F  P  T A  +  A G  H  ++   G ++TWG            DFG  G    D
Sbjct: 49  PELFGCPAGTNARWLDVACGREHTAAIASDGSLFTWG----------ANDFGQLG----D 94

Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS---------GDEFFTLSP 203
            T ++  LP +      +           ++   E  EN  +         G    +  P
Sbjct: 95  GTEERRKLPEKVKQLESEFVKSVSCGAHCSACIAEPHENDGTISTRRLWVWGQNQGSNLP 154

Query: 204 CLV--TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
            L      P   I +V+ G  H + LS+ G +  WGY   GQLG G   + +    +I  
Sbjct: 155 RLFWGAFKPNTIIREVSCGAVHVVALSEEGLLQAWGYNEYGQLGRGVTCEGLQGACIIS- 213

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
             +A    + P LV+              + +++CG  H+AV++D G + T+G G  GQ 
Sbjct: 214 -SYAKFLDEAPELVK--------------IAKVSCGEYHTAVISDKGEVYTWGLGNMGQL 258

Query: 322 GHGST---NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GH S    + +L P    +L  I ++ +A G  HT  ++  G +Y +GG + GQLG G  
Sbjct: 259 GHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCSVTQGGALYAWGGGRSGQLGLGPQ 318

Query: 379 QA-------ENVPKLLETPILES-KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
                    ++       P+L   K  ++V+CG  H+ +   DG++  WG+N YGQ
Sbjct: 319 TGLFSCVANDSQTFFRNIPVLVVPKGVQLVACGYSHTLISMSDGRIHGWGYNNYGQ 374



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 182/436 (41%), Gaps = 82/436 (18%)

Query: 18  KETVVYMWGY----LPGTSPEKSPILSP--IPARLCG-----GDSWKDVCGGGCG--FAL 64
           +++ +Y+WGY      G   ++  +  P  +P  L G        W DV    CG     
Sbjct: 17  RKSAIYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNARWLDV---ACGREHTA 73

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC-VSVTEAG 123
           A +  G L TWG A+D GQ    + +  + PE      E+  VK+ +  AHC   + E  
Sbjct: 74  AIASDGSLFTWG-ANDFGQLGDGTEERRKLPEKVK-QLESEFVKSVSCGAHCSACIAEPH 131

Query: 124 E---------VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPTEQAP 166
           E         ++ WG  +    + + R F   G+F+ ++  ++         AL  E   
Sbjct: 132 ENDGTISTRRLWVWGQNQ---GSNLPRLF--WGAFKPNTIIREVSCGAVHVVALSEEGLL 186

Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
            +        + R  T    + +   +S  +F   +P LV      KI KV+ G  HT +
Sbjct: 187 QAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELV------KIAKVSCGEYHTAV 240

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           +SD G+V+ WG G  GQLG  S             L++     D+ LL R+  V   G  
Sbjct: 241 ISDKGEVYTWGLGNMGQLGHSS-------------LQYG----DKELLPRR-VVTLDG-- 280

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---- 342
              ++K++ACGG H+  VT  GAL  +G G  GQ G G            S    +    
Sbjct: 281 --IFIKDVACGGVHTCSVTQGGALYAWGGGRSGQLGLGPQTGLFSCVANDSQTFFRNIPV 338

Query: 343 ------VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
                 V+ +A G  HT+    +GR++ +G N +GQ           P  ++  + E ++
Sbjct: 339 LVVPKGVQLVACGYSHTLISMSDGRIHGWGYNNYGQAANEKCTYAWYPSPIDWCVGEVRK 398

Query: 397 AKVVSCGARHSAVLTE 412
              ++ G  HSAVLT+
Sbjct: 399 ---LAAGGGHSAVLTD 411



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 58/260 (22%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTP-HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           ++ WGY   GQ G   +   +  P  L P L    +G +   L                 
Sbjct: 21  IYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNARWL----------------- 63

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
            ++ACG  H+A +   G+L T+G   +GQ G G+   +  P     L    V+ ++ G  
Sbjct: 64  -DVACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKLPEKVKQLESEFVKSVSCGAH 122

Query: 352 HTVCIS---------VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
            + CI+            R++V+G NQ            N+P+L       +   + VSC
Sbjct: 123 CSACIAEPHENDGTISTRRLWVWGQNQ----------GSNLPRLFWGAFKPNTIIREVSC 172

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSID---------------RNIPSLVPIHGFL 447
           GA H   L+E+G + +WG+N+YGQLG G + +                  P LV I    
Sbjct: 173 GAVHVVALSEEGLLQAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELVKI---- 228

Query: 448 PRNIACGWWHTLLLAETTQI 467
              ++CG +HT ++++  ++
Sbjct: 229 -AKVSCGEYHTAVISDKGEV 247



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 47/259 (18%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           VA G  HT  ++  G ++ WG    GQLG G+  +    P  +  LE             
Sbjct: 65  VACGREHTAAIASDGSLFTWGANDFGQLGDGTEERR-KLPEKVKQLE------------- 110

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVT----DAGALLTFGWGLYGQCGHGSTNDQLRP 332
                        +VK ++CG   SA +     + G + T    ++GQ   GS   +L  
Sbjct: 111 -----------SEFVKSVSCGAHCSACIAEPHENDGTISTRRLWVWGQ-NQGSNLPRL-- 156

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------QAENVP 384
            + +   +  + +++ G  H V +S EG +  +G N++GQLG GV            +  
Sbjct: 157 FWGAFKPNTIIREVSCGAVHVVALSEEGLLQAWGYNEYGQLGRGVTCEGLQGACIISSYA 216

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-- 442
           K L+      K AKV SCG  H+AV+++ G+V +WG    GQLG   S+      L+P  
Sbjct: 217 KFLDEAPELVKIAKV-SCGEYHTAVISDKGEVYTWGLGNMGQLG-HSSLQYGDKELLPRR 274

Query: 443 ---IHGFLPRNIACGWWHT 458
              + G   +++ACG  HT
Sbjct: 275 VVTLDGIFIKDVACGGVHT 293


>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
           sapiens]
 gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
 gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
 gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
          Length = 815

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 135/293 (46%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  +    +   P   S + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E   PK++E   +  +    +SCG  H+A++T+
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHTALITD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  +  IP+L      F+ + +ACG  H ++ A
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   ++     E K  K +S G+  SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHSAFVT 206



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 42/281 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ +++   +++ +G    GQLGLGS+   +  P  +  L     + AA G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                     +K+++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  + ++   P   +  +   V  I+ G +H+  ++ +G +YVFG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 368 NQFGQLGTGVDQAEN--VPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            + G+LG       N   P+L+ E P    ++   V+CG  H+ VLTE+  V ++G  ++
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIP----EKVIQVACGGEHTVVLTENA-VYTFGLGQF 271

Query: 425 GQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           GQLGLG  + + + P ++  I       I+CG  HT L+ +
Sbjct: 272 GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITD 312



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 28/162 (17%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P LV+  P  K+ +VA GG HT++L++   V+ +G G  GQLGLG+ +     P +I  
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           +      +D+ +               SY   I+CG  H+A++TD G + TFG G +G+ 
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGKL 327

Query: 322 GHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           G G  N  +   P+  S+ +   V+ +A G  H V  +   R
Sbjct: 328 GLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHR 369


>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
          Length = 815

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 135/293 (46%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  +    +   P   S + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E   PK++E   +  +    +SCG  H+A++T+
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHTALITD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  +  IP+L      F+ + +ACG  H ++ A
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 90/170 (52%), Gaps = 4/170 (2%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   ++     E K  K +S G+  SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-IACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I    P + I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGN--PVSWISCGYYHSAFVT 206



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 42/281 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ +++   +++ +G    GQLGLGS+   +  P  +  L     + AA G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                     +K+++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  + ++   P   +  +   V  I+ G +H+  ++ +G +YVFG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGNPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 368 NQFGQLGTGVDQAEN--VPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            + G+LG       N   P+L+ E P    ++   V+CG  H+ VLTE+  V ++G  ++
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIP----EKVIQVACGGEHTVVLTENA-VYTFGLGQF 271

Query: 425 GQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           GQLGLG  + + + P ++  I       I+CG  HT L+ +
Sbjct: 272 GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITD 312



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 28/162 (17%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P LV+  P  K+ +VA GG HT++L++   V+ +G G  GQLGLG+ +     P +I  
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           +      +D+ +               SY   I+CG  H+A++TD G + TFG G +G+ 
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGKL 327

Query: 322 GHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           G G  N  +   P+  S+ +   V+ +A G  H V  +   R
Sbjct: 328 GLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHR 369


>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
           caballus]
          Length = 551

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 111/225 (49%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L PC ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 140 LVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 199 TGCLQNKV------------------------VVNIACGQMCSMAVVDTGEVYVWGYSGN 234

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G + +Q  P   ++L  I+V++ A G  HT+ ++ EG+VYV+G N +GQLGTG  
Sbjct: 235 GQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQLGTGNK 294

Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
             +  P    TPI+  K    ++ +C + H SA  T+ G V  WG
Sbjct: 295 SNQPYP----TPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 122/252 (48%), Gaps = 30/252 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G K+  ++ G G H ++ +  G+V+ WG+    QLG G+     
Sbjct: 81  GDVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLGNGT----- 135

Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
            T H L+PC                 S N S K     V E+ACG  HS V+T  G +  
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKR----VIEVACGSYHSLVLTSDGEVFA 175

Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G VYV+G +  G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNG 235

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G   + N P       L+  R +  +CG  H+ VLT++GQV  WG N YGQLG G+
Sbjct: 236 QLGLG--GSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQLGTGN 293

Query: 432 SIDRNIPSLVPI 443
             ++  P+ + +
Sbjct: 294 KSNQPYPTPIIV 305



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K++AC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + +V ++
Sbjct: 98  KKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEV 157

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVVNIACGQMC 216

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
           S  + + G+V  WG++  GQLGLG S ++  P  V  + G   +  ACG+ HTL+L +  
Sbjct: 217 SMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEG 276

Query: 466 QI 467
           Q+
Sbjct: 277 QV 278



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 4/161 (2%)

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVCISVEGRVYVFGGN 368
           +   G    G  G G     + P    SL   +V  ++ G   H V  + EG V+ +G N
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHN 126

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            + QLG G      VP  + T  L +KR   V+CG+ HS VLT DG+V +WG+N  GQ+G
Sbjct: 127 AYSQLGNGTTNHGLVPCHISTN-LSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185

Query: 429 LGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
            G + ++ IP  V   +   +  NIACG   ++ + +T ++
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEV 226



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 97/235 (41%), Gaps = 36/235 (15%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LATSE G++ TWG       S L +G       P  
Sbjct: 89  PRRLDSLTGKKVACLSYGSGPHVVLATSE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+              ++G     ST  
Sbjct: 145 ISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 191

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCL 205
           Q  +P         +    +   +  S A  ++        SG+    L       +PC 
Sbjct: 192 Q-PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTPCR 250

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           V    G+++ + A G  HTL+L+D GQV+ WG    GQLG G++     PTP ++
Sbjct: 251 VAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQPYPTPIIV 305



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A  ++G++  WG +
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYS 232

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V +AA G+AH + +T+ G+VY WG
Sbjct: 233 ---GNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWG 282


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 120/259 (46%), Gaps = 32/259 (12%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L         
Sbjct: 75  LTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK----- 129

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQL 330
                              + +++CG  HS  ++    + ++G   +GQ G G     Q 
Sbjct: 130 -------------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NVP     P
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALS---GRNVPVQSNKP 227

Query: 391 I----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
           +    L++     +SCG  H+AVLT+DG+V ++G N+ GQLG   + ++  P LV     
Sbjct: 228 LSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG 287

Query: 447 LPRNIACGWWHTLLLAETT 465
           L   I CG +HTL    TT
Sbjct: 288 LVSQIDCGSYHTLAYVHTT 306



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + +P  +T   G+KI +V+ G  H+L LS   QV+ WG    GQLGLG       +P  +
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY- 318
             LE        PL                   ++A GG HS  ++  G   +FGWG   
Sbjct: 176 RSLEGI------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNS 209

Query: 319 -GQCGHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ      N  +   +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N+ GQLG
Sbjct: 210 SGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 270 YSPTPEKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG    Q   +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLTVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      +  ++G     ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 4/182 (2%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
           A R  V+ I+CGG+H+A+V+  G + ++G    G+ GHG   D   P    +L  + +E 
Sbjct: 310 AVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIEL 369

Query: 346 IAAGLWHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           +A G +HT  +++ G +Y +G    +FG LG G D +  VPK L  P LE      +SCG
Sbjct: 370 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGP-LEGIHVSSISCG 428

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
             H+ ++T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + 
Sbjct: 429 PFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAVV 488

Query: 463 ET 464
           E 
Sbjct: 489 EV 490



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT+I++  GQ++ +G G  G LG G R + +  P  +  L+       
Sbjct: 419 GIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDR-ESLSVPKEVESLK------- 470

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G + T+G G  
Sbjct: 471 ----------------GLRTVRA-ACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 513

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 514 GRLGHGDKESRLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN--P 571

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           QA+ +        L     + +SCGA H AVLT   +V +WG    G+LG G++ D+N P
Sbjct: 572 QADGMLPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTP 631

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     RN+ CG
Sbjct: 632 TLVEALKDKQVRNVVCG 648



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P      + + V+ I+ G  H   +S +G +Y +G    G+LG GVD     PKL+
Sbjct: 300 DCLVPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLI 359

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV--PI 443
           +   L     ++V+CG  H+  +T  G + +WG    K+G LG G+ I   +P  +  P+
Sbjct: 360 DA--LTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPL 417

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G    +I+CG +HT+++    Q+
Sbjct: 418 EGIHVSSISCGPFHTVIVTSAGQL 441



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 69/165 (41%), Gaps = 25/165 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G V+  G    GQLG      M+P
Sbjct: 519 GDKESRLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGMLP 578

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                        GK  +++V+EI+CG  H AV+T    + T+G
Sbjct: 579 -------------------------ARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWG 613

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            G  G+ GHG+T+D+  P+   +L D QV  +  G   T  I + 
Sbjct: 614 KGANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAICIH 658


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 122/262 (46%), Gaps = 40/262 (15%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT--PHL 258
           L+P  +   P   + +VA G RHTL L+  G+V+  G     QLG       +PT  P  
Sbjct: 25  LTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACGSNDYSQLG-----HELPTKRPLQ 79

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           IP LE                           + +IACG RHS  +T+ G +L++G    
Sbjct: 80  IPELEDYV------------------------ITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 319 GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG--- 374
           GQ GH S  D ++ P     L+   V QIA G  H++ ++  G +Y +G N +GQLG   
Sbjct: 116 GQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKS 175

Query: 375 -TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
            + + Q  N P  L T  L    A  ++CG  H+ ++++   V  WG N  GQLGL D  
Sbjct: 176 PSELSQC-NYPMRLTT--LLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDET 232

Query: 434 DRNIPS-LVPIHGFLPRNIACG 454
           +R  P+ L  +     R +ACG
Sbjct: 233 NRAYPTQLKTLRTLGVRFVACG 254



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 150/373 (40%), Gaps = 60/373 (16%)

Query: 34  EKSPILSP--IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
           E   IL+P  IP +    DS  +    G    L  + SGK+   GS D     Y   G  
Sbjct: 20  EDEQILTPSQIPWK---PDSAVNQVACGHRHTLFLTASGKVYACGSND-----YSQLGHE 71

Query: 92  GETPEPFPLPT--EASVVKAAAGWAHCVSVTEAGEVYTWGWREC-----------VPSAK 138
             T  P  +P   +  + + A G  H +++TE G+V +WG  EC           +   K
Sbjct: 72  LPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPK 131

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
           + R   S    Q       S   T          G  +  +    S  E S+        
Sbjct: 132 IVRYLVSKTVVQIACGNNHSLALT--CCGELYSWGSNIYGQLGVKSPSELSQCNY----- 184

Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
               P  +T   G+    +A GG HT ++S    V+GWG    GQLGL            
Sbjct: 185 ----PMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDE--------- 231

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
                      +R    +  ++ + G      V+ +ACG   S  +T+ G + T G G Y
Sbjct: 232 ----------TNRAYPTQLKTLRTLG------VRFVACGDEFSVFLTNEGGVFTCGAGAY 275

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGV 377
           GQ GHG +++++ P     LM   + Q+A G  HT+  +   GR+Y FG    GQLGT  
Sbjct: 276 GQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRN 335

Query: 378 DQAENVPKLLETP 390
            ++ N+P+++  P
Sbjct: 336 TKSLNLPQVVIGP 348



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 34/242 (14%)

Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           +++ WG    GQLGLG    + + TP  IP    +A                        
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSA------------------------ 37

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V ++ACG RH+  +T +G +   G   Y Q GH       RP     L D  + QIA G 
Sbjct: 38  VNQVACGHRHTLFLTASGKVYACGSNDYSQLGHELPTK--RPLQIPELEDYVITQIACGS 95

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHSAV 409
            H++ ++  G+V  +G N+ GQLG   DQ    +PK++    L SK    ++CG  HS  
Sbjct: 96  RHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVR--YLVSKTVVQIACGNNHSLA 153

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR---NIP-SLVPIHGFLPRNIACGWWHTLLLAETT 465
           LT  G++ SWG N YGQLG+    +    N P  L  + G     IACG  HT L+++++
Sbjct: 154 LTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSS 213

Query: 466 QI 467
            +
Sbjct: 214 AV 215



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 121/264 (45%), Gaps = 42/264 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
           IT++A G RH++ L++ GQV  WG    GQLG  S   ++  P ++  L        A G
Sbjct: 88  ITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACG 147

Query: 269 KDRPL-------LVRQGSVNSSGKAGRSYVKE--------------------IACGGRHS 301
            +  L       L   GS N  G+ G     E                    IACGG H+
Sbjct: 148 NNHSLALTCCGELYSWGS-NIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHT 206

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAAGLWHTVCISV 358
            +++ + A+  FGWG    CG    ND+   +Y + L  ++   V  +A G   +V ++ 
Sbjct: 207 FLISKSSAV--FGWG-RNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTN 263

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVL 417
           EG V+  G   +GQLG G    E +P+++    L       V+CG RH+ A++   G++ 
Sbjct: 264 EGGVFTCGAGAYGQLGHGFSSNEMLPRMVME--LMGSTISQVACGNRHTLALVPSRGRIY 321

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLV 441
            +G    GQLG  ++   N+P +V
Sbjct: 322 GFGLGSSGQLGTRNTKSLNLPQVV 345


>gi|299473606|emb|CBN78001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 117/270 (43%), Gaps = 60/270 (22%)

Query: 210 PGVKITKVAAGGRHTLIL------------SDMG-----QVWGWGYGGEGQLGLGSRIKM 252
           PG++    A G  HTL+L             D G     +V  WG GG+GQLG+G+    
Sbjct: 69  PGIEC--AAFGQNHTLLLHKVAATTEGDCADDAGSETKTEVLAWGSGGQGQLGIGTITLE 126

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
              P  IP L                            V ++ACG +HSA VT  G L T
Sbjct: 127 SELPKTIPALSA------------------------YRVLQVACGAQHSAAVTSYGDLFT 162

Query: 313 FGWGLYGQCGHGST------ND-----QLRPSYASSLMDIQVEQ-----IAAGLWHTVCI 356
           +G G  GQ GH S       ND     QLRP    + +  +  Q     ++ G   T+ +
Sbjct: 163 WGRGTEGQLGHASRHLPPELNDAITGVQLRPKPVPAFLATKKRQRPVAGVSCGANFTLVV 222

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQ 415
           +  G  + FGG   GQLG G   +  VPK++      +    V V+ G  H+   T  G+
Sbjct: 223 TRAGEAWAFGGGAMGQLGIGRVTSVGVPKMVMPSCPATGEPFVEVAAGWSHALARTSGGR 282

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPIHG 445
           +LSWG+N  G LGLGD   R +P  VP+ G
Sbjct: 283 ILSWGFNALGALGLGDHRTRFLPEAVPLDG 312



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 130/374 (34%), Gaps = 90/374 (24%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWA 114
           G C     +    +++ WGS    GQ  L  G      E P+  P  +   V++ A G  
Sbjct: 93  GDCADDAGSETKTEVLAWGSG---GQGQLGIGTITLESELPKTIPALSAYRVLQVACGAQ 149

Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
           H  +VT  G+++TWG              G+ G     S            PP    A  
Sbjct: 150 HSAAVTSYGDLFTWGR-------------GTEGQLGHAS---------RHLPPELNDAIT 187

Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
            V  R K   A                   L T      +  V+ G   TL+++  G+ W
Sbjct: 188 GVQLRPKPVPA------------------FLATKKRQRPVAGVSCGANFTLVVTRAGEAW 229

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
            +G G  GQLG+G R+  V  P ++                    + S    G  +V E+
Sbjct: 230 AFGGGAMGQLGIG-RVTSVGVPKMV--------------------MPSCPATGEPFV-EV 267

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           A G  H+   T  G +L++G+   G  G G    +  P           E +    W   
Sbjct: 268 AAGWSHALARTSGGRILSWGFNALGALGLGDHRTRFLP-----------EAVPLDGWQKQ 316

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
               +      GG     L        N P   +T  + +   KV +CG   S  L+ DG
Sbjct: 317 QQQQQQPDEKGGGCGSNPL--------NNPPAAKTARITA--VKVHACG-NCSGALSADG 365

Query: 415 QVLSWGWNKYGQLG 428
           ++ +WG  + G LG
Sbjct: 366 ELFTWGCGRAGGLG 379


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 120/259 (46%), Gaps = 32/259 (12%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L         
Sbjct: 75  LTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK----- 129

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQL 330
                              + +++CG  HS  ++    + ++G   +GQ G G     Q 
Sbjct: 130 -------------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NVP     P
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALS---GRNVPVQSNKP 227

Query: 391 I----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
           +    L++     +SCG  H+AVLT+DG+V ++G N+ GQLG   + ++  P LV     
Sbjct: 228 LSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG 287

Query: 447 LPRNIACGWWHTLLLAETT 465
           L   I CG +HTL    TT
Sbjct: 288 LVSQIDCGSYHTLAYVHTT 306



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + +P  +T   G+KI +V+ G  H+L LS   QV+ WG    GQLGLG       +P  +
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY- 318
             LE        PL                   ++A GG HS  ++  G   +FGWG   
Sbjct: 176 RSLEGI------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNS 209

Query: 319 -GQCGHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ      N  +   +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N+ GQLG
Sbjct: 210 SGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 270 YSPTPEKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG    Q   +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLTVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      +  ++G     ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 120/259 (46%), Gaps = 32/259 (12%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L         
Sbjct: 75  LTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK----- 129

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQL 330
                              + +++CG  HS  ++    + ++G   +GQ G G     Q 
Sbjct: 130 -------------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NVP     P
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALS---GRNVPVQSNKP 227

Query: 391 I----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
           +    L++     +SCG  H+AVLT+DG+V ++G N+ GQLG   + ++  P LV     
Sbjct: 228 LSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG 287

Query: 447 LPRNIACGWWHTLLLAETT 465
           L   I CG +HTL    TT
Sbjct: 288 LVSQIDCGSYHTLAYVHTT 306



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + +P  +T   G+KI +V+ G  H+L LS   QV+ WG    GQLGLG       +P  +
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY- 318
             LE        PL                   ++A GG HS  ++  G   +FGWG   
Sbjct: 176 RSLEGI------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNS 209

Query: 319 -GQCGHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ      N  +   +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N+ GQLG
Sbjct: 210 SGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 270 YSPTPEKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG    Q   +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLTVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      +  ++G     ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|383861352|ref|XP_003706150.1| PREDICTED: uncharacterized protein LOC100881287 [Megachile rotundata]
          Length = 1884

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 30/209 (14%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            V++  V+ G  HTL +++ G V+ WG    GQLGLG +I    TP LI  L         
Sbjct: 873  VEVLSVSCGHCHTLAVTNNG-VYAWGSSRFGQLGLG-KILQCSTPELITYL--------- 921

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                            +  + +   G  HS  +T  G + T+GWG++GQ GHG+T+ ++ 
Sbjct: 922  ---------------AQEVIIDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKIV 966

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+  +SL+   +  I+AG  HT+ +S EG VY FG N FGQLG G +   +VP      +
Sbjct: 967  PTLITSLLGTVIRYISAGHAHTLALSTEGIVYAFGCNIFGQLGVGSNVKSSVP----IKV 1022

Query: 392  LESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            L  ++  +++ G  H+  ++   ++  WG
Sbjct: 1023 LLPEKIFLITTGYFHNLAVSYTNKLYVWG 1051



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 114/256 (44%), Gaps = 37/256 (14%)

Query: 217  VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
            + AG  H +++ + G V+ WG   +G LG G  +     P  I                 
Sbjct: 824  LCAGFSHVVLIRN-GNVYTWGSSVQGCLGTGPSVLRYGPPQAI----------------- 865

Query: 277  QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRPSY 334
                 S  K     V  ++CG  H+  VT+ G    + WG   +GQ G G       P  
Sbjct: 866  -----SFFKIMEVEVLSVSCGHCHTLAVTNNGV---YAWGSSRFGQLGLGKILQCSTPEL 917

Query: 335  ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
             + L    +    AG +H+V ++ +GRV+ +G    GQLG G    + VP L+ +  L  
Sbjct: 918  ITYLAQEVIIDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKIVPTLITS--LLG 975

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---I 451
               + +S G  H+  L+ +G V ++G N +GQLG+G     N+ S VPI   LP     I
Sbjct: 976  TVIRYISAGHAHTLALSTEGIVYAFGCNIFGQLGVGS----NVKSSVPIKVLLPEKIFLI 1031

Query: 452  ACGWWHTLLLAETTQI 467
              G++H L ++ T ++
Sbjct: 1032 TTGYFHNLAVSYTNKL 1047



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 7/181 (3%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS---LMDIQ 342
           +G  + +   C G    V+   G + T+G  + G  G G +  +  P  A S   +M+++
Sbjct: 815 SGADFKRRPLCAGFSHVVLIRNGNVYTWGSSVQGCLGTGPSVLRYGPPQAISFFKIMEVE 874

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
           V  ++ G  HT+ ++  G VY +G ++FGQLG G     + P+L+ T + +      V+ 
Sbjct: 875 VLSVSCGHCHTLAVTNNG-VYAWGSSRFGQLGLGKILQCSTPELI-TYLAQEVIIDAVA- 931

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLL 461
           G  HS  LT DG+V +WGW  +GQLG G++  + +P+L+  + G + R I+ G  HTL L
Sbjct: 932 GQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKIVPTLITSLLGTVIRYISAGHAHTLAL 991

Query: 462 A 462
           +
Sbjct: 992 S 992



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 35/196 (17%)

Query: 202  SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
            +P L+T      I    AG  H++ L+  G+V+ WG+G  GQLG G+  K +  P LI  
Sbjct: 914  TPELITYLAQEVIIDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKI-VPTLITS 972

Query: 262  LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
            L               G+V          ++ I+ G  H+  ++  G +  FG  ++GQ 
Sbjct: 973  L--------------LGTV----------IRYISAGHAHTLALSTEGIVYAFGCNIFGQL 1008

Query: 322  GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN--------QFGQL 373
            G GS      P     L+  ++  I  G +H + +S   ++YV+G +        Q  + 
Sbjct: 1009 GVGSNVKSSVP--IKVLLPEKIFLITTGYFHNLAVSYTNKLYVWGASPQVLRLQAQTQKR 1066

Query: 374  GTGVDQAENVPKLLET 389
               ++Q +N+ K  E 
Sbjct: 1067 ARILEQRDNIIKQFEN 1082



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 80/210 (38%), Gaps = 61/210 (29%)

Query: 54   DVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
            +V    CG    LA + +G +  WGS+   GQ  L       TPE      +  ++ A A
Sbjct: 874  EVLSVSCGHCHTLAVTNNG-VYAWGSSR-FGQLGLGKILQCSTPELITYLAQEVIIDAVA 931

Query: 112  GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
            G  H V++T  G V+TWGW             G  G     +T K+  +PT         
Sbjct: 932  GQYHSVALTADGRVFTWGW-------------GVHGQLGHGNTDKK-IVPT--------- 968

Query: 172  AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
                                             L+T   G  I  ++AG  HTL LS  G
Sbjct: 969  ---------------------------------LITSLLGTVIRYISAGHAHTLALSTEG 995

Query: 232  QVWGWGYGGEGQLGLGSRIK-MVPTPHLIP 260
             V+ +G    GQLG+GS +K  VP   L+P
Sbjct: 996  IVYAFGCNIFGQLGVGSNVKSSVPIKVLLP 1025



 Score = 38.1 bits (87), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 40/163 (24%)

Query: 288  RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND----------------QLR 331
            R  + +I+ G  H+A+VT  G+L T+G  L GQ G+GS  +                Q+ 
Sbjct: 1160 RGDIIQISAGCHHNALVTKDGSLYTWGRNLDGQIGNGSRREVPIPTPLCYNPASIFAQVP 1219

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP------K 385
            P + S   D + +++  G+ ++             GN   + G G D+A++ P      +
Sbjct: 1220 PRHNSHRRD-EEQELDGGMKNS-------------GNS-EKNGNGNDEAKSSPAESSESR 1264

Query: 386  LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
                PI+++     + CG  ++  +   G VL+WG N   QLG
Sbjct: 1265 EKINPIIKTVG---IYCGYDYTVAVQPGGTVLAWGNNSRAQLG 1304


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 189/469 (40%), Gaps = 93/469 (19%)

Query: 16  ECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGK 71
           E  ET+VY WGY      G   E +   +P    +      K V  G    ++A + +G+
Sbjct: 45  EYPETIVYSWGYGGFGQLGLQNENN-YYTPTEIEVLTDKKIKKVEAGKS-ISMALTHNGE 102

Query: 72  LITWGSA-------DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
           + +WG         +D     +T       PE         + + + G  H  +VTE GE
Sbjct: 103 VYSWGKNKGGILGHEDRLSFNMTQ------PERIEKLLGKKIKQISCGQFHMAAVTEDGE 156

Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
           VYTWG +E          FG  G                          EE+ + +K   
Sbjct: 157 VYTWGNKE----------FGKLGH------------------------EEELKQEQKIKI 182

Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
            R    +    D   ++ P  +     +K  +VA G + T++LS+ G+V+ +GY   G L
Sbjct: 183 KRGNLSHDYLQD---SMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSL 239

Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G  S    V TP LI         KD   +V+                 I+ G    A +
Sbjct: 240 GYVSDQNSVTTPQLI---------KDLNDIVK-----------------ISAGYSFCAAI 273

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL-MDIQVEQIAAGLWHTVCISVEGRVY 363
           T  G L T+G    GQ G+  +  Q +PS  +       +  ++ G      ++ +G++Y
Sbjct: 274 TKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLY 333

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
            +G    GQLG G       P+ +E    + K  K+ +CG  H+A +TED Q+  +G   
Sbjct: 334 TWGFGGDGQLGHGNKSDLYAPRHVE---FKQKIIKI-ACGGSHAAFITEDNQLYQFGRGS 389

Query: 424 YGQLGLGDSID-----RNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQ 466
            GQLG+G ++      R+ P+LV    G    ++ CG  HT+ + +  Q
Sbjct: 390 EGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQEFQ 438



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 119/258 (46%), Gaps = 11/258 (4%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G KI +++ G  H   +++ G+V+ WG    G+LG    +K      +          +D
Sbjct: 135 GKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQD 194

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQ 329
             L  +  S+      G    K++ACG + + V+++ G + TFG+  YG  G+ S  N  
Sbjct: 195 SMLPQKIESL------GNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSV 248

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
             P     L DI   +I+AG      I+ +G++Y +G N+ GQLG      +  P ++ T
Sbjct: 249 TTPQLIKDLNDI--VKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIV-T 305

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
                     VSCG    A LT+ GQ+ +WG+   GQLG G+  D   P  V     + +
Sbjct: 306 GFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQKIIK 365

Query: 450 NIACGWWHTLLLAETTQI 467
            IACG  H   + E  Q+
Sbjct: 366 -IACGGSHAAFITEDNQL 382



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 32/184 (17%)

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           + ++G+G +GQ G  + N+   P+    L D +++++ AG   ++ ++  G VY +G N+
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNK 110

Query: 370 FGQLG------TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
            G LG        + Q E + KLL       K+ K +SCG  H A +TEDG+V +WG  +
Sbjct: 111 GGILGHEDRLSFNMTQPERIEKLL------GKKIKQISCGQFHMAAVTEDGEVYTWGNKE 164

Query: 424 YGQLGLGDSI-------------------DRNIPSLVPIHGFLP-RNIACGWWHTLLLAE 463
           +G+LG  + +                   D  +P  +   G +  + +ACG   T++L+E
Sbjct: 165 FGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSE 224

Query: 464 TTQI 467
             ++
Sbjct: 225 DGKV 228


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 132/293 (45%), Gaps = 47/293 (16%)

Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +SG +   L P  +     + +  ++ GGRH  +++  G+V+ WG    G+LG G     
Sbjct: 292 SSGAKMDCLVPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD- 350

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
           VP P LI  L H                          ++ +ACG  H+  VT +G L T
Sbjct: 351 VPQPKLIDALAHMN------------------------IELVACGEYHTCAVTLSGDLYT 386

Query: 313 FGWGL--YGQCGHGSTNDQLRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           +G G   +G  GHG+      P   +  ++ I V  I+ G WHT  ++  G+++ FG   
Sbjct: 387 WGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGS 446

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE------------DGQVL 417
           FG LG G  Q+ +VP+ +E+  L+  R    +CG  H+A + E             G++ 
Sbjct: 447 FGVLGHGDRQSISVPREVES--LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIF 504

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAETTQI 467
           +WG    G+LG GD   R +P+ V     +  N   +ACG   T+ L  +  +
Sbjct: 505 TWGDGDKGRLGHGDKETRLVPTCVA--SLVEPNFCQVACGHCFTVALTTSGHV 555



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 123/258 (47%), Gaps = 42/258 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R + +  P  +  L+       
Sbjct: 417 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDR-QSISVPREVESLK------- 468

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G + T+G G  
Sbjct: 469 ----------------GLRTVRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+  +SL++    Q+A G   TV ++  G VY  G + +GQLG    
Sbjct: 512 GRLGHGDKETRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGN--P 569

Query: 379 QAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           QA+  VP  +E   L     + +SCGA H AVLT   +V +WG    G+LG GD+ DRN 
Sbjct: 570 QADGMVPARVEGK-LHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNS 628

Query: 438 PSLV-PIHGFLPRNIACG 454
           P+LV  +     R++ CG
Sbjct: 629 PTLVEALKDKQVRSVVCG 646



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 158/384 (41%), Gaps = 68/384 (17%)

Query: 28  LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
           L  +S  K   L P P    G    +++  GG    L T + G++ +WG   +E    L 
Sbjct: 289 LGSSSGAKMDCLVPKPLEFAGRLDVQNISCGGRHATLVTKQ-GEVYSWG---EESGGRLG 344

Query: 88  SGKHGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
            G   + P+P  +   A  ++   A G  H  +VT +G++YTWG          T +FG 
Sbjct: 345 HGVDCDVPQPKLIDALAHMNIELVACGEYHTCAVTLSGDLYTWG--------NGTFNFGL 396

Query: 146 AGSFQKDS--TGKQSALPTEQAPPSDKRAG---EEVVKRRKTSSAREESENPAS------ 194
           +G   + S    K+   P E    S    G     VV    TS+ +  +    S      
Sbjct: 397 SGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVV----TSAGQLFTFGDGSFGVLGH 452

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEG 242
           GD      P  V    G++  + A G  HT  + ++            G+++ WG G +G
Sbjct: 453 GDRQSISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKG 512

Query: 243 QLGLGSR-IKMVPT--PHLI-PCLEHAASGKDRPL-LVRQGSVNS--------------- 282
           +LG G +  ++VPT    L+ P     A G    + L   G V +               
Sbjct: 513 RLGHGDKETRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQAD 572

Query: 283 -------SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                   GK  +++V+EI+CG  H AV+T    + T+G G  G+ GHG T+D+  P+  
Sbjct: 573 GMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLV 632

Query: 336 SSLMDIQVEQIAAGLWHTVCISVE 359
            +L D QV  +  G+  T  I + 
Sbjct: 633 EALKDKQVRSVVCGINFTAAICIH 656


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  IACGGRH+ +VT  G + ++G    G+ GHG   D   P    +L    VE +A G 
Sbjct: 292 VHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGE 351

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G   + +G LG G + +  +P+ +    +E  R   +SCGA H+A
Sbjct: 352 YHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQ-MEGIRVSYISCGAWHTA 410

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           V+T  GQ+ ++G   +G LG GD I  N P  V  + G     +ACG WHT    E
Sbjct: 411 VVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVE 466



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 131/267 (49%), Gaps = 43/267 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G++++ ++ G  HT +++  GQ++ +G G  G LG G               +H  S   
Sbjct: 396 GIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHG---------------DHITSNFP 440

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV-------VTDAGA--------LLTFGW 315
           R +   +G   +          ++ACG  H+A        ++D+G         L T+G 
Sbjct: 441 REVETLRGLRTT----------KVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGD 490

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           G  G+ GHG    +L P   ++L++ ++ Q+A G   TV ++  GRVY  G   +GQLG+
Sbjct: 491 GDKGRLGHGDNEPRLVPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGS 550

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
                + +P  +E  I  S   + V+CG+ H AVLT   +V +WG    GQLG GD+  R
Sbjct: 551 ATANGK-LPTCVEGEIANS-FVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHR 608

Query: 436 NIPSLVPI-HGFLPRNIACGWWHTLLL 461
           N P++V +      +N+ACG   T+++
Sbjct: 609 NTPTIVDVLKDKQVKNVACGSKFTVVI 635



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 129/300 (43%), Gaps = 54/300 (18%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           +A GGRH ++++  G+++ WG    G+LG G     V  P +I  L     E  A G+  
Sbjct: 295 IACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEAD-VSHPKIIDTLSGTNVELVACGEYH 353

Query: 272 PLLVR-QGSVNSSGKAGRSY-------------------------VKEIACGGRHSAVVT 305
              V   G + + G    +Y                         V  I+CG  H+AVVT
Sbjct: 354 TCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVT 413

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG----- 360
            AG L TFG G +G  GHG       P    +L  ++  ++A G+WHT   +VE      
Sbjct: 414 SAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAA-AVEAINELS 472

Query: 361 -----------RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
                      ++Y +G    G+LG G ++   VP+ +   I E  R   V+CG   +  
Sbjct: 473 DSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEE--RICQVACGNDLTVA 530

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           LT  G+V + G   YGQLG   + +  +P+ V   I       +ACG +H  +L    ++
Sbjct: 531 LTTAGRVYTMGSTAYGQLG-SATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEV 589



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 107/232 (46%), Gaps = 44/232 (18%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI-------LSDMG--------QVWGWGYG 239
           GD   +  P  V    G++ TKVA G  HT         LSD G        +++ WG G
Sbjct: 432 GDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDG 491

Query: 240 GEGQLGLGSRIKMVPTPHLIP-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
            +G+LG G        P L+P C+  AA  ++R                   + ++ACG 
Sbjct: 492 DKGRLGHGDN-----EPRLVPECV--AALIEER-------------------ICQVACGN 525

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
             +  +T AG + T G   YGQ G  + N +L       + +  VE++A G +H   ++ 
Sbjct: 526 DLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTS 585

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           +  VY +G    GQLG G +   N P +++  +L+ K+ K V+CG++ + V+
Sbjct: 586 KNEVYTWGKGLNGQLGHGDNNHRNTPTIVD--VLKDKQVKNVACGSKFTVVI 635



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 6/152 (3%)

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           QC   S  D L P    S + + V  IA G  H V ++ +G ++ +G    G+LG GV+ 
Sbjct: 269 QCSLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEA 328

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW--GWNKYGQLGLGDSIDRNI 437
             + PK+++T  L     ++V+CG  H+  +T  G + +W  G + YG LG G  +   I
Sbjct: 329 DVSHPKIIDT--LSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWI 386

Query: 438 PSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           P  V   + G     I+CG WHT ++    Q+
Sbjct: 387 PQKVGGQMEGIRVSYISCGAWHTAVVTSAGQL 418



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 25/164 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD    L P  V      +I +VA G   T+ L+  G+V+  G    GQLG  +    +P
Sbjct: 499 GDNEPRLVPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLP 558

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           T     C+E                    G+   S+V+E+ACG  H AV+T    + T+G
Sbjct: 559 T-----CVE--------------------GEIANSFVEEVACGSYHVAVLTSKNEVYTWG 593

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            GL GQ GHG  N +  P+    L D QV+ +A G   TV I +
Sbjct: 594 KGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVICI 637


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           LSPC V+ N    K   VA G  H+++L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 115 LSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQ-PIPRKV 173

Query: 260 -PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          V  IACG   S  V D G +  +G+   
Sbjct: 174 TSCLQNKT------------------------VIGIACGQMSSMAVVDNGEVYAWGYNGN 209

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+VEQ+  G  HT+ ++ EG +Y +G N +GQLGTG  
Sbjct: 210 GQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNK 269

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P  ++  + + +  ++ +C + H SA  ++ GQV  WG
Sbjct: 270 SNQSYP--VQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 127/278 (45%), Gaps = 32/278 (11%)

Query: 172 AGEEVVKRRKTSSAREESENPA----SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLI 226
           AG EV+   K         N +    +GD    + P  + +  G +I  ++ G G H +I
Sbjct: 29  AGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVI 88

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           ++  G+V+ WG+    QLG GS         L PC               Q S N   K 
Sbjct: 89  VTSDGEVYSWGHNAYSQLGNGS-----TNQALSPC---------------QVSTNLINKK 128

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQ 345
             S    +ACG  HS V+T  G +  +G+   GQ G GST +Q  P   +S L +  V  
Sbjct: 129 AHS----VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG 184

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           IA G   ++ +   G VY +G N  GQLG G   + N P       L+  R + V CG  
Sbjct: 185 IACGQMSSMAVVDNGEVYAWGYNGNGQLGLG--SSGNQPTPCRIAALQGIRVEQVVCGYA 242

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           H+  LT++G + +WG N YGQLG G+  +++ P  V +
Sbjct: 243 HTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIV 280



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 27/249 (10%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           V   G   L ++   +V+  G    G LG G    ++  P  I  L    SGK R + + 
Sbjct: 26  VFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIE-PRRIDML----SGK-RIVSLS 79

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
            GS                  G H  +VT  G + ++G   Y Q G+GSTN  L P   S
Sbjct: 80  YGS------------------GPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS 121

Query: 337 S-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           + L++ +   +A G  H++ ++ +G VY +G N  GQ+G+G    + +P+ + T  L++K
Sbjct: 122 TNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKV-TSCLQNK 180

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACG 454
               ++CG   S  + ++G+V +WG+N  GQLGLG S ++  P  +  + G     + CG
Sbjct: 181 TVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCG 240

Query: 455 WWHTLLLAE 463
           + HTL L +
Sbjct: 241 YAHTLALTD 249



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 4/174 (2%)

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVC 355
            G     +T    +   G    G  G G     + P     L   ++  ++ G   H V 
Sbjct: 29  AGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVI 88

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++ +G VY +G N + QLG G       P  + T ++ +K+A  V+CG+ HS VLT DG+
Sbjct: 89  VTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLI-NKKAHSVACGSHHSMVLTCDGE 147

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
           V +WG+N  GQ+G G + ++ IP  V   +       IACG   ++ + +  ++
Sbjct: 148 VYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEV 201



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           VY WGY   G     S    PIP ++      K V G  CG   ++A  ++G++  WG  
Sbjct: 148 VYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGY- 206

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V +   G+AH +++T+ G +Y WG
Sbjct: 207 --NGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWG 257


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 124/272 (45%), Gaps = 34/272 (12%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P       G ++  V  G RHT+ L + G V+  G    GQLG          
Sbjct: 18  DEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  + K    +V   + N         +  ++CG  H+  + D G +  +G 
Sbjct: 68  --------HEKARKKPEQVVSLDAQN---------IVAVSCGEAHTLALNDKGQVFAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           G  GQ G     D LR P    SL ++ + Q+A G WH++ ++  G ++ +G N++GQLG
Sbjct: 111 GSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLG 170

Query: 375 TGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
            G  Q   V  P+++++  L+      +S G  HS  LT  G +  WG NK+GQLGLGD+
Sbjct: 171 LG-QQGACVCSPQVIQS--LQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDN 227

Query: 433 IDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            DR  P L+  +       I CG  HT  L +
Sbjct: 228 DDRRFPVLLKTLRSQQVVYICCGEDHTAALTK 259



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 113/238 (47%), Gaps = 35/238 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           V IT+VA G  H+L L+  G+++ WG    GQLGLG +   V +P +I  L+    G   
Sbjct: 137 VHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFG--- 193

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                                +I+ GG HS  +T +GA+  FGWG   +GQ G G  +D+
Sbjct: 194 ---------------------QISAGGAHSFGLTLSGAI--FGWGRNKFGQLGLGDNDDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P    +L   QV  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 RFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFE 290

Query: 389 TPILESKRAKVVSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG 445
              L       ++CG +H+ A +   G++ S+G    GQLG   + +R  P+  P+ G
Sbjct: 291 ---LMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPT--PVKG 343



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P         +V  +  G  HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   ++A   P+  +   L+++    VSCG  H+  L + GQV +WG    GQL
Sbjct: 61  NDLGQLGH--EKARKKPE--QVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQL 116

Query: 428 GLGDSID-----RNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL    D     R + SL  +H      +ACG+WH+L LA   +I
Sbjct: 117 GLSIVEDCLRVPRTVKSLSEVH---ITQVACGYWHSLALARGGEI 158



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 120/306 (39%), Gaps = 56/306 (18%)

Query: 43  PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFP 99
           P ++   D+ +++    CG A  LA ++ G++  WG   D GQ  L+  +     P    
Sbjct: 75  PEQVVSLDA-QNIVAVSCGEAHTLALNDKGQVFAWGLGSD-GQLGLSIVEDCLRVPRTVK 132

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE-----------CVPSAKVTRDFGSAGS 148
             +E  + + A G+ H +++   GE+++WG  +           CV S +V +       
Sbjct: 133 SLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSL----- 187

Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
                      +P  Q       +    +        R +      GD      P L+  
Sbjct: 188 ---------QGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKT 238

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
               ++  +  G  HT  L+  G V+ +G GG GQLG  S      T H +         
Sbjct: 239 LRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TNHEV--------- 283

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTN 327
             R +    GSV          V +IACG +H+ A +  +G + +FG G  GQ G  ST 
Sbjct: 284 NPRKVFELMGSV----------VSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTC 333

Query: 328 DQLRPS 333
           +++ P+
Sbjct: 334 NRISPT 339


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 28/259 (10%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  ++      +T+V+ G  H+L L++ GQ++ WG    GQLG    +   P P +I  +
Sbjct: 80  PQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSI 139

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                       V +I+CG  H   +T++G L  +G   YGQ G
Sbjct: 140 ------------------------ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLG 175

Query: 323 HGSTNDQL-RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G+T  ++   +   SL  I +  IA G  H+  +S  G ++ +G N FGQLG     + 
Sbjct: 176 LGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSR 235

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
             P  L+T  L S   + +SCG   S  LT++G V + G   +GQLG G   +  +P +V
Sbjct: 236 CYPTQLKT--LRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMV 293

Query: 442 -PIHGFLPRNIACGWWHTL 459
             + G     IACG  HTL
Sbjct: 294 FELMGSKITQIACGRKHTL 312



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 103/182 (56%), Gaps = 8/182 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAG 349
           V++ ACGG H+ ++T  G L T G   +GQ GH + N    RP + S+L +  V Q++ G
Sbjct: 38  VQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCG 97

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSA 408
           L H++ ++  G+++ +G N  GQLG  +D      P+++++  + +K    +SCG  H  
Sbjct: 98  LSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKS--IATKTVVQISCGHSHCL 155

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH---GFLPRNIACGWWHTLLLAETT 465
            LT  G++ +WG N+YGQLGLG +  + +P+   +    G     IACG  H+  ++++ 
Sbjct: 156 ALTNSGELFAWGANEYGQLGLG-TTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSG 214

Query: 466 QI 467
            I
Sbjct: 215 AI 216



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 35/233 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +++ G  H L L++ G+++ WG    GQLGLG+  K VPT  L+  L           
Sbjct: 144 VVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSL----------- 192

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLR 331
                       AG   +  IACGG HS  V+ +GA+  FGWG   +GQ G    + +  
Sbjct: 193 ------------AGIP-IAFIACGGNHSFAVSKSGAI--FGWGKNTFGQLGLNDLDSRCY 237

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P+   +L  + V  I+ G   +V ++ EG V+  G   FGQLG G    E +P++    +
Sbjct: 238 PTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRM----V 293

Query: 392 LESKRAKV--VSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            E   +K+  ++CG +H+ A +   G+V  +G    GQLG+G S+  N P +V
Sbjct: 294 FELMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIV 346



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 136/339 (40%), Gaps = 93/339 (27%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP------TEASVVKAAAG 112
           G   +LA +  G+L +WGS +  GQ       H      +P P         +VV+ + G
Sbjct: 97  GLSHSLALTNWGQLFSWGS-NATGQL-----GHDLDMVSYPAPRMIKSIATKTVVQISCG 150

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
            +HC+++T +GE++ WG  E          +G  G     +TGK+  +PT          
Sbjct: 151 HSHCLALTNSGELFAWGANE----------YGQLG---LGTTGKK--VPT---------- 185

Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
                                           LV    G+ I  +A GG H+  +S  G 
Sbjct: 186 ------------------------------ATLVKSLAGIPIAFIACGGNHSFAVSKSGA 215

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           ++GWG    GQLGL                        R    +  ++ S G      V+
Sbjct: 216 IFGWGKNTFGQLGLNDL-------------------DSRCYPTQLKTLRSLG------VR 250

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            I+CG   S  +T  G + T G G +GQ GHG+  +++ P     LM  ++ QIA G  H
Sbjct: 251 YISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKH 310

Query: 353 TVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
           T+  +   G+VY FG    GQLG G   + N P+++  P
Sbjct: 311 TLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIVRGP 349



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 8/111 (7%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +Y +G    G+LG G  + E V    E    ++   +  +CG  H+ +LT+DG++ + G 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 422 NKYGQLGLGDSIDRNIPSLVP-----IHGFLPRNIACGWWHTLLLAETTQI 467
           N +GQLG   +   N+P+  P     +  ++   ++CG  H+L L    Q+
Sbjct: 63  NDHGQLGHDTN---NLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQL 110


>gi|145528624|ref|XP_001450106.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417706|emb|CAK82709.1| unnamed protein product [Paramecium tetraurelia]
          Length = 387

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 32/217 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           +I  + A   +T+ + + G+++ WG    G+LG  +  K +  P  I  L          
Sbjct: 168 RIVDIYAQHNYTMAIDEEGRIFSWGSNEFGRLGQNAFAKCMKLPSPITSL---------- 217

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                         G + + ++A G  H   +   G L ++G GL GQ GHG++ND  +P
Sbjct: 218 --------------GNAKIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGNSNDCNKP 263

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
           +  SSL  I+  ++  G  H++ +   G VYVFG  QFGQLG G  + ++ P++L+    
Sbjct: 264 TQISSLQAIR--EVTCGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDTPQMLQI--- 318

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
                ++++CG  HS VLT++G +  +G N+  QLGL
Sbjct: 319 ---HGEMIACGRHHSGVLTKNGALFMFGNNEQSQLGL 352



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 35/258 (13%)

Query: 211 GVKITKVAAGGRHTLILSDM---GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
           G ++ K+A G  H++ L ++    +++ WG     QLG  +  + V  PH +        
Sbjct: 110 GWQLQKIAVGLDHSVALIEVEEENKIFVWGSNTYQQLGFDASEQFVAIPHQL-------D 162

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
             + P +V                 +I     ++  + + G + ++G   +G+ G  +  
Sbjct: 163 SDNLPRIV-----------------DIYAQHNYTMAIDEEGRIFSWGSNEFGRLGQNAFA 205

Query: 328 DQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
             ++ PS  +SL + ++ ++A G +H + I  +G +Y +G    GQLG G     N P  
Sbjct: 206 KCMKLPSPITSLGNAKIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGNSNDCNKP-- 263

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
             T I   +  + V+CG  HS  L  +G V  +G  ++GQLGLGD   ++ P ++ IHG 
Sbjct: 264 --TQISSLQAIREVTCGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDTPQMLQIHGE 321

Query: 447 LPRNIACGWWHTLLLAET 464
           +   IACG  H+ +L + 
Sbjct: 322 M---IACGRHHSGVLTKN 336



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 128/303 (42%), Gaps = 69/303 (22%)

Query: 94  TPEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGE---VYTWGWRECVPSAKVTRDFGS 145
           TP  F + +EAS     + K A G  H V++ E  E   ++ WG                
Sbjct: 96  TPTLFDIFSEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWG---------------- 139

Query: 146 AGSFQK---DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF--- 199
           + ++Q+   D++ +  A+P +    +  R  +   +   T +  EE    + G   F   
Sbjct: 140 SNTYQQLGFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGRIFSWGSNEFGRL 199

Query: 200 ---TLSPCLVTLNP-----GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
                + C+   +P       KI K+A G  H L +   G ++ WG G +GQLG G+   
Sbjct: 200 GQNAFAKCMKLPSPITSLGNAKIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGN--- 256

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
                         ++  ++P  +      SS +A    ++E+ CG  HS  + + G++ 
Sbjct: 257 --------------SNDCNKPTQI------SSLQA----IREVTCGEAHSMALQNNGSVY 292

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
            FG G +GQ G G    Q  P     ++ I  E IA G  H+  ++  G +++FG N+  
Sbjct: 293 VFGSGQFGQLGLGDYKQQDTP----QMLQIHGEMIACGRHHSGVLTKNGALFMFGNNEQS 348

Query: 372 QLG 374
           QLG
Sbjct: 349 QLG 351



 Score = 38.1 bits (87), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 62  FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
           + +A  E G++ +WGS +          K  + P P      A + K A G  H +++  
Sbjct: 178 YTMAIDEEGRIFSWGSNEFGRLGQNAFAKCMKLPSPITSLGNAKIAKLALGTFHVLAIDT 237

Query: 122 AGEVYTWG 129
            G +Y+WG
Sbjct: 238 QGNLYSWG 245


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 172/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFLNKRIRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKA 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
            +T  Q  LP            EE ++  +   +  E                       
Sbjct: 111 -ATDGQLGLP----------GTEECIRVPRNIKSLSE----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +PH+I  L         
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  +  +IA GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFA-QIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDDNDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   +V  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H +A +   G++ S+G    GQLG G + +R  P  V    +L
Sbjct: 291 ---LMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK-GNWL 346

Query: 448 PRNIAC 453
           P +  C
Sbjct: 347 PYSTQC 352



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 7/175 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           ++++ CG RH+  V D G + T G    GQ GH       RP +  +L    +  ++ G 
Sbjct: 36  IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGE 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            HT+ ++ +G+VY +G    GQLG  G ++   VP+ +++  L   +   V+CG  HS  
Sbjct: 94  AHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKS--LSEIQIVQVACGYYHSLA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           L++  +V SWG NKYGQLGLG    + N P ++  + G     IA G  H+ +L 
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT 206



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ ++  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   ++A   P+      L+++    VSCG  H+  L + GQV +WG    GQL
Sbjct: 61  NDLGQLGH--EKARKRPE--HVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIV---QVACGYYHSLALSKGSEV 158


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 39/274 (14%)

Query: 192 PASGDEFFTLSPCLVTLNPGV------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           P  G+ F +L+  +V +   +      +I + A G  HTL+L++ G+++  G    GQLG
Sbjct: 321 PIQGEVFPSLAKVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLG 380

Query: 246 LGSRIKMVPT--PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
               ++ +P   P L+  LE+                          + +  CG  HS  
Sbjct: 381 --HDVESLPNKRPQLLTALENYI------------------------ITQACCGTAHSLA 414

Query: 304 VTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           +T+ G + ++G    GQ G  + T  Q+ P    S+   QV QIAAG +H + ++  G +
Sbjct: 415 LTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGEL 474

Query: 363 YVFGGNQFGQLGTGV-DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           Y +G N +GQLG G+ ++  + P L+++  L       ++CG  HS  +++ G +  WG 
Sbjct: 475 YAWGSNAYGQLGLGMTNEKVSTPTLVQS--LAGVPIAFIACGGNHSFAVSKSGAIFGWGK 532

Query: 422 NKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACG 454
           N +GQLGL D   R  P+ L  +     R ++CG
Sbjct: 533 NTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCG 566



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 172/419 (41%), Gaps = 99/419 (23%)

Query: 33  PEKSPILSPIPARLCGGDSW---KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLT 87
           P  + ++  +P ++     W   K++    CG    L  +  GK+ + G+ D     +  
Sbjct: 328 PSLAKVMVMVPRKM----DWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDV 383

Query: 88  SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
                + P+         + +A  G AH +++T  G+VY+WG          +   G  G
Sbjct: 384 ESLPNKRPQLLTALENYIITQACCGTAHSLALTNWGQVYSWG----------SNAVGQLG 433

Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
             Q+  T +Q                                           + P L+ 
Sbjct: 434 --QETDTTRQ-------------------------------------------IIPRLIR 448

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
                ++ ++AAG  H L L++ G+++ WG    GQLGLG   + V TP L+  L     
Sbjct: 449 SIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSL----- 503

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGS 325
                             AG   +  IACGG HS  V+ +GA+  FGWG   +GQ G   
Sbjct: 504 ------------------AGVP-IAFIACGGNHSFAVSKSGAI--FGWGKNTFGQLGLND 542

Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
            N +  P+   +L  + V  ++ G   +V ++  G V+  G   FGQLG G    E +P+
Sbjct: 543 LNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPR 602

Query: 386 LLETPILESKRAKV--VSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           +    + E   +K+  ++CG RH+ A +   G++  +G +  GQLG+G   + N P +V
Sbjct: 603 M----VFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIV 657


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 172/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFLNKRIRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKA 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
            +T  Q  LP            EE ++  +   +  E                       
Sbjct: 111 -ATDGQLGLP----------GTEECIRVPRNIKSLSE----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +PH+I  L         
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  +  +IA GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFA-QIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDDNDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   +V  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H +A +   G++ S+G    GQLG G + +R  P  V    +L
Sbjct: 291 ---LMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK-GNWL 346

Query: 448 PRNIAC 453
           P +  C
Sbjct: 347 PYSTQC 352



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 7/175 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           ++++ CG RH+  V D G + T G    GQ GH       RP +  +L    +  ++ G 
Sbjct: 36  IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGE 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            HT+ ++ +G+VY +G    GQLG  G ++   VP+ +++  L   +   V+CG  HS  
Sbjct: 94  AHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKS--LSEIQIVQVACGYYHSLA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           L++  +V SWG NKYGQLGLG    + N P ++  + G     IA G  H+ +L 
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT 206



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ ++  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   ++A   P+      L+++    VSCG  H+  L + GQV +WG    GQL
Sbjct: 61  NDLGQLGH--EKARKRPE--HVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIV---QVACGYYHSLALSKGSEV 158


>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 127/285 (44%), Gaps = 43/285 (15%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPTPHLIPC-LEHAASGKDRPL 273
           +A GG HTL L++ G+V+  G    GQLG+    R    P    IP    H ++G +   
Sbjct: 135 IACGGAHTLFLTESGRVYATGLNNFGQLGISDEKRFSTEPVEVRIPKEAMHISAGYNHSC 194

Query: 274 LVRQGS------VNSSGKAGRS-------------------YVKEIACGGRHSAVVTDAG 308
           +V          VNS+G+ G                      +K  A G  HS  V D G
Sbjct: 195 VVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGG 254

Query: 309 ALLTFGWGLYGQCGHG---------STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            + ++G G  G+ GHG          +  +  P     L  I+V+ +AAG+ H+ C+   
Sbjct: 255 EVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDEN 314

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G VY+FG     ++  G       P L+ T +L+ +    V+CG  H+ VLT+ G + SW
Sbjct: 315 GAVYIFGERATNRVSFGEANKATTPSLIST-LLDCEE---VACGGYHTCVLTKGGDLYSW 370

Query: 420 GWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLA 462
           G N+ G LG G +   ++P  V  P        ++CGW HT  ++
Sbjct: 371 GSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAIS 415



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 49/282 (17%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV--------P 254
           P  V    G+ I + A G  H++ ++D G+V+ WG G  G+LG G     +         
Sbjct: 226 PTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEH 285

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           TP LI  LE                           VK +A G  HSA V + GA+  FG
Sbjct: 286 TPRLIKELEGIK------------------------VKHVAAGMLHSACVDENGAVYIFG 321

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
                +   G  N    PS  S+L+D   E++A G +HT  ++  G +Y +G N+ G LG
Sbjct: 322 ERATNRVSFGEANKATTPSLISTLLD--CEEVACGGYHTCVLTKGGDLYSWGSNENGCLG 379

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW------------N 422
            G     ++P+ +E P  +S  +K VSCG +H+A ++  G + +WGW            +
Sbjct: 380 NGSTSVSHLPERVEGPFSKSPVSK-VSCGWKHTAAIS-GGAIFTWGWGGSHGTFSVDGHS 437

Query: 423 KYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAE 463
             GQLG G  +D   P+ + +        ++CG+ HT  + E
Sbjct: 438 SGGQLGHGSDVDYVKPTKIDLGENVKVVQVSCGFNHTGAILE 479



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 42/254 (16%)

Query: 228 SDMGQVWG--WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           SD G+ +G  WG G  G+LGLG+ +    +P  +PC     S  DR +L           
Sbjct: 92  SDSGKRFGAVWGNGDFGRLGLGN-LDSQWSP--VPC-----SSFDREML----------- 132

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE- 344
                 K IACGG H+  +T++G +   G   +GQ G    +D+ R S     + I  E 
Sbjct: 133 ------KGIACGGAHTLFLTESGRVYATGLNNFGQLG---ISDEKRFSTEPVEVRIPKEA 183

Query: 345 -QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
             I+AG  H+  ++ +G +Y++G N  GQLG G   A+ V    +   L+    K  + G
Sbjct: 184 MHISAGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALG 243

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLG---------DSIDRNIPSLVP-IHGFLPRNIAC 453
           + HS  + + G+V SWG  + G+LG G          S   + P L+  + G   +++A 
Sbjct: 244 SDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAA 303

Query: 454 GWWHTLLLAETTQI 467
           G  H+  + E   +
Sbjct: 304 GMLHSACVDENGAV 317



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 149/383 (38%), Gaps = 91/383 (23%)

Query: 40  SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPF 98
           SP+P      +  K +  GG    L  +ESG++   G  ++ GQ  ++  K   T P   
Sbjct: 120 SPVPCSSFDREMLKGIACGGA-HTLFLTESGRVYATG-LNNFGQLGISDEKRFSTEPVEV 177

Query: 99  PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
            +P EA  +  +AG+ H   VT  GE+Y WG                  S  +   GK+S
Sbjct: 178 RIPKEA--MHISAGYNHSCVVTADGELYMWG----------------VNSNGQLGLGKKS 219

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT------------------ 200
           A         D   G  V+KR    S  + S   A G E F+                  
Sbjct: 220 AKAVHLPTKVDSLDGI-VIKRAALGS--DHSIAVADGGEVFSWGDGRSGRLGHGHESTFL 276

Query: 201 --------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
                    +P L+    G+K+  VAAG  H+  + + G V+ +G     ++  G   K 
Sbjct: 277 GFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANK- 335

Query: 253 VPTPHLIP----CLEHAASGKDRPLLVRQGSVNS-----------------------SGK 285
             TP LI     C E A  G    +L + G + S                        G 
Sbjct: 336 ATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGP 395

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY------------GQCGHGSTNDQLRPS 333
             +S V +++CG +H+A ++  GA+ T+GWG              GQ GHGS  D ++P+
Sbjct: 396 FSKSPVSKVSCGWKHTAAIS-GGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPT 454

Query: 334 YASSLMDIQVEQIAAGLWHTVCI 356
                 +++V Q++ G  HT  I
Sbjct: 455 KIDLGENVKVVQVSCGFNHTGAI 477


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 128/301 (42%), Gaps = 78/301 (25%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R  +                 D+
Sbjct: 2999 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3041

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P LV               +++IACG  HSA ++  G L T+G G YG+ GHG    QL+
Sbjct: 3042 PRLVEALRAKK--------IRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLK 3093

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE- 388
            P   ++L   +V Q+A G     T+ ++ +G V+ +G   FG+LG G  +    P  +E 
Sbjct: 3094 PKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIER 3153

Query: 389  -----------------------------------------------TPI--LESKRAKV 399
                                                            PI  L  +R   
Sbjct: 3154 LSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIH 3213

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
            V+ GA H   +T+ GQV +WG N +GQ G G++     P+LV  +       +ACG  H+
Sbjct: 3214 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 3273

Query: 459  L 459
            +
Sbjct: 3274 M 3274



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 134/309 (43%), Gaps = 79/309 (25%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GG+H L L+  G+V+ WG G +G+LG G+R+                   DR
Sbjct: 4157 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSY-----------------DR 4199

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+   +  S        V +IACG  HSA +T +G +LT+G G YG+ GHG + DQLR
Sbjct: 4200 PKLLEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 4251

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L+  +   IA  +G   T+CI+ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 4252 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 4311

Query: 390  --------------------------------------------------PILESKRAKV 399
                                                                L+ K+   
Sbjct: 4312 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4371

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            ++ G+ H    ++ G+V +WG N  GQLG G       P LV  + G     + CG  HT
Sbjct: 4372 IATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHT 4431

Query: 459  LLLAETTQI 467
            L L+ T+Q+
Sbjct: 4432 LALS-TSQL 4439



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 127/271 (46%), Gaps = 32/271 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            T S  +  L P      +A G +   ++S  G+V+  G G  G+LGLG     VP PH +
Sbjct: 2937 TFSQTISRLRP----IHIAGGSKSLFVVSQDGKVFACGEGTNGRLGLGV-THNVPLPHQL 2991

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            P L           +V++ +V+S              GG+H+  +T  G + ++G G  G
Sbjct: 2992 PVLHQ--------YVVKKVAVHS--------------GGKHALALTLDGKVFSWGEGEDG 3029

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            + GHG+     +P    +L   ++  IA G  H+  IS +G +Y +G  ++G+LG G + 
Sbjct: 3030 KLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3089

Query: 380  AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
             +  PKL+    L   R   V+CG+R   +  LTEDG V SWG   +G+LG G S     
Sbjct: 3090 TQLKPKLVTA--LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSAT 3147

Query: 438  PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
            P  +  + G     I CG   +L L    ++
Sbjct: 3148 PHEIERLSGIGVVQIECGAQFSLALTRAGEV 3178



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 116/255 (45%), Gaps = 41/255 (16%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
           GRH L + +    + WG G   +LG G             C       K   L+ R    
Sbjct: 650 GRHFLAVDNNFNAYSWGTGDNRRLGHGD------------CHSRELPTKIESLVRR---- 693

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
                     VK + CG  +SA +T  G L T+G G YG+ GHG ++DQ  P+   +L D
Sbjct: 694 ----------VKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKD 743

Query: 341 IQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
            QV  +A  +G  HT+C++ EG VY +G   +G+LG     +   P L+E       R +
Sbjct: 744 HQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIEC----LPRVQ 799

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-----IPSLV-PIHGFLPRNIA 452
            V  G++ S  LT +GQ+ SWG  K   LG    ++RN     +P L+  +      ++A
Sbjct: 800 RVFAGSQFSLALTGEGQLYSWG--KASCLG-HQLVERNVQGCSVPRLITSLQHKRIVDVA 856

Query: 453 CGWWHTLLLAETTQI 467
            G  H L L+   +I
Sbjct: 857 VGVTHCLALSSAGEI 871



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 34/227 (14%)

Query: 233  VWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
            ++GWG+   GQLG   GSRIK  PT    PC    A    RP+                 
Sbjct: 4072 IYGWGHNHRGQLGGLEGSRIK-TPT----PC---EALSLLRPV----------------- 4106

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--A 348
              ++A G +    VT  G L   G+G  G+ G G ++    P+   SL  + V+++A  +
Sbjct: 4107 --QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNS 4164

Query: 349  GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
            G  H + ++ +G VY +G  + G+LG G   + + PKLLE   L       ++CG+ HSA
Sbjct: 4165 GGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEH--LNGMSVADIACGSAHSA 4222

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
             +T  G VL+WG  +YG+LG GDS D+  P LV  + G+   +IACG
Sbjct: 4223 AITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4269



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 126/308 (40%), Gaps = 35/308 (11%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQA 165
            V   +G  HC+++T  GEVY WG  E        R         +   G   A +    A
Sbjct: 4160 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSA 4219

Query: 166  PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGRH 223
              +   A   V+   K    R        GD    L P LV    G +   +A  +G   
Sbjct: 4220 HSAAITASGHVLTWGKGRYGRL-----GHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQ 4274

Query: 224  TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
            TL ++D   VW WG G  G+LG G                  + G   P  +        
Sbjct: 4275 TLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKLPYKI-------E 4310

Query: 284  GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
              AG   +K + CG + S  +T +GA+ T+G G + + GHGS +   RP   ++L   ++
Sbjct: 4311 SLAGLGVIK-VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4369

Query: 344  EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
              IA G  H V  S  G VY +G N  GQLG G   A   P+L+    L+ K    V+CG
Sbjct: 4370 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCG 4427

Query: 404  ARHSAVLT 411
            + H+  L+
Sbjct: 4428 SAHTLALS 4435



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 147/367 (40%), Gaps = 60/367 (16%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
             GG       S+ GK+   G   +     L  G     P P  LP     VVK  A   G
Sbjct: 2951 AGGSKSLFVVSQDGKVFACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 3007

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H +++T  G+V++WG  E           G  G   + +  K   +   +A    K+ 
Sbjct: 3008 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 3053

Query: 173  GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
             +       +++   + E              GD    L P LVT   G ++ +VA G R
Sbjct: 3054 RDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSR 3113

Query: 223  --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
               TL L++ G V+ WG G  G+LG G   +   TPH I  L                  
Sbjct: 3114 DAQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSATPHEIERL------------------ 3154

Query: 281  NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
              SG      V +I CG + S  +T AG + T+G G Y + GHG      +P   + L  
Sbjct: 3155 --SGIG----VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRG 3208

Query: 341  IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
             +V  +A G  H + ++  G+VY +G N  GQ G+G       P L+    L++     V
Sbjct: 3209 RRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG--LDAVFVNRV 3266

Query: 401  SCGARHS 407
            +CG+ HS
Sbjct: 3267 ACGSSHS 3273



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P+++ ++  ++   IA G      +S +G+V+  G    G+LG GV    NVP   + P+
Sbjct: 2936 PTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGTNGRLGLGV--THNVPLPHQLPV 2993

Query: 392  LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
            L     K V+   G +H+  LT DG+V SWG  + G+LG G+    + P LV  +     
Sbjct: 2994 LHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKI 3053

Query: 449  RNIACGWWHT 458
            R+IACG  H+
Sbjct: 3054 RDIACGSSHS 3063



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 37/221 (16%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           ++  V  G  ++  ++  G ++ WG G  G+LG G     +     +P +  A   KD  
Sbjct: 693 RVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHG-----ISDDQCLPTMVMAL--KDHQ 745

Query: 273 LL-VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           ++ V  GS                 G  H+  +T+ G +  +G G YG+ G+ S N  L+
Sbjct: 746 VVDVALGS-----------------GDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQ 788

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG-----GNQFGQLGTGVDQAENVPKL 386
           P     L   +V+++ AG   ++ ++ EG++Y +G     G+Q  +      Q  +VP+L
Sbjct: 789 PLLIECL--PRVQRVFAGSQFSLALTGEGQLYSWGKASCLGHQLVERNV---QGCSVPRL 843

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           + +  L+ KR   V+ G  H   L+  G++  WG N   Q+
Sbjct: 844 ITS--LQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI 882



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P+         ++  A G  HCV+
Sbjct: 4323 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4381

Query: 119  VTEAGEVYTWG 129
             ++AGEVYTWG
Sbjct: 4382 CSDAGEVYTWG 4392



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)

Query: 46   LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
            L G  +    CG G    L  ++   + +WG  D     Y   G+ G      P   E+ 
Sbjct: 4258 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4312

Query: 105  ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
                V+K   G    V++T++G VYTWG                 G F +   G      
Sbjct: 4313 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4350

Query: 162  TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
                         + V+R K  +A +                       G KI  +A G 
Sbjct: 4351 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4376

Query: 222  RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
             H +  SD G+V+ WG   EGQLG G+ +  +  P L+  L+
Sbjct: 4377 LHCVACSDAGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4417



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 78/198 (39%), Gaps = 41/198 (20%)

Query: 204 CLVTLNPGVKITKVA-----AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           CL T+   +K  +V      +G  HTL L++ G V+ WG G  G+LG  S       P L
Sbjct: 733 CLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNAS-CNSSLQPLL 791

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           I CL                            V+ +  G + S  +T  G L  + WG  
Sbjct: 792 IECLPR--------------------------VQRVFAGSQFSLALTGEGQL--YSWGKA 823

Query: 319 GQCGHGSTNDQLR----PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GH      ++    P   +SL   ++  +A G+ H + +S  G ++ +G N   Q+ 
Sbjct: 824 SCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQIC 883

Query: 375 TGVDQAENVPKLLETPIL 392
                +E    LL  PIL
Sbjct: 884 PASVCSE---PLLRQPIL 898



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
            G  F+LA +  G+L +WG A   G   +     G   P          +V  A G  HC
Sbjct: 803 AGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHC 862

Query: 117 VSVTEAGEVYTWG 129
           ++++ AGE++ WG
Sbjct: 863 LALSSAGEIFGWG 875



 Score = 38.9 bits (89), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 1/84 (1%)

Query: 46   LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
            LCG    +  CG      LA +E G + +WG  D  G+      +   TP      +   
Sbjct: 3100 LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGD-FGKLGRGGSEGSATPHEIERLSGIG 3158

Query: 106  VVKAAAGWAHCVSVTEAGEVYTWG 129
            VV+   G    +++T AGEV+TWG
Sbjct: 3159 VVQIECGAQFSLALTRAGEVWTWG 3182


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT--PHL 258
           L P  +   P   + ++A G RHTL L+  G+V+  G   + QLG       +PT  P L
Sbjct: 25  LIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACGNNDQAQLGHN-----LPTKRPLL 79

Query: 259 IPCLEH------AASGKDRPLLVRQGSV-----NSSGKAGRS------------------ 289
           IP L++      A   +    L   G V     N  G+ G+S                  
Sbjct: 80  IPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSK 139

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY---ASSLMDIQVEQI 346
           +V +IACG  HS  +T  G L ++G  +YGQ G     +    +Y    ++L+ I +  I
Sbjct: 140 HVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATI 199

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G  H+  IS    V+ FG N  GQLG   +     P  L+T  L +   + V+CG   
Sbjct: 200 ACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQLKT--LRTLGVRFVACGDEF 257

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
           S  LT +G V + G   YGQLG G + +  +P +V  + G     +ACG  HTL L 
Sbjct: 258 SVFLTNEGGVFTCGAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALV 314



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 110/241 (45%), Gaps = 34/241 (14%)

Query: 233 VWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           ++ WG    GQLG+G    + +  P  IP         D PL                  
Sbjct: 3   LFCWGNASHGQLGMGGIEDEQILIPSQIPW------KPDAPL------------------ 38

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           ++IACG RH+  +T  G +   G     Q GH       RP     L +  V  IA G  
Sbjct: 39  RQIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTK--RPLLIPELQNYVVVAIACGSR 96

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVL 410
           H++ ++  G+V  +G N  GQLG   DQ+   +PK++ +  L SK    ++CG  HS  L
Sbjct: 97  HSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRS--LVSKHVVQIACGNNHSLAL 154

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDR---NIP-SLVPIHGFLPRNIACGWWHTLLLAETTQ 466
           T  G++ SWG N YGQLG+    +    N P  L  + G     IACG  H+ L+++++ 
Sbjct: 155 TSCGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSA 214

Query: 467 I 467
           +
Sbjct: 215 V 215



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 145/370 (39%), Gaps = 56/370 (15%)

Query: 59  GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
            CG    L  + +GK+   G+ D   Q+ L      + P   P      VV  A G  H 
Sbjct: 42  ACGHRHTLFLTANGKVYACGNND---QAQLGHNLPTKRPLLIPELQNYVVVAIACGSRHS 98

Query: 117 VSVTEAGEVYTWGWREC-----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           +++TE G+V +WG  +C           +   K+ R   S    Q       S   T   
Sbjct: 99  MALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCG 158

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
                  G  +  +      +E S             P  +T   G+ +  +A GG H+ 
Sbjct: 159 ELYS--WGSNIYGQLGVKPPQELSHCNY---------PLRLTTLLGIPLATIACGGNHSF 207

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           ++S    V+G+G    GQLGL                    S +  P         +  K
Sbjct: 208 LISKSSAVFGFGRNNCGQLGLNDE-----------------SNRAYP---------TQLK 241

Query: 286 AGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
             R+  V+ +ACG   S  +T+ G + T G G YGQ GHGS  +++ P     LM   + 
Sbjct: 242 TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEMLPRMVMELMGSTIT 301

Query: 345 QIAAGLWHTV-CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKVVSC 402
           Q+A G  HT+  +   GRVY FG    GQLG     +  +P+ +  P +  S  A + S 
Sbjct: 302 QVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQEVLGPWVSPSDSALLQSN 361

Query: 403 GARHSAVLTE 412
            A+ S V+ +
Sbjct: 362 DAKASVVIHQ 371



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 36/262 (13%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T  P L+       +  +A G RH++ L++ GQV  WG    GQLG  +   ++  P +I
Sbjct: 74  TKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKII 133

Query: 260 PCL--EHA---ASGKDRPL-------LVRQGSVNSSGKAGRSYVKE-------------- 293
             L  +H    A G +  L       L   GS N  G+ G    +E              
Sbjct: 134 RSLVSKHVVQIACGNNHSLALTSCGELYSWGS-NIYGQLGVKPPQELSHCNYPLRLTTLL 192

Query: 294 ------IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
                 IACGG HS +++ + A+  FG    GQ G    +++  P+   +L  + V  +A
Sbjct: 193 GIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVA 252

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
            G   +V ++ EG V+  G   +GQLG G +  E +P+++    L       V+CG RH+
Sbjct: 253 CGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEMLPRMVME--LMGSTITQVACGNRHT 310

Query: 408 -AVLTEDGQVLSWGWNKYGQLG 428
            A++   G+V  +G    GQLG
Sbjct: 311 LALVPSRGRVYGFGLGSSGQLG 332


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 172/426 (40%), Gaps = 97/426 (22%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFLNKRIRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKA 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
            +T  Q  LP            EE ++  +   +  E                       
Sbjct: 111 -ATDGQLGLP----------GTEECIRVPRNIKSLSE----------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +PH+I  L         
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  +  +IA GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFA-QIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDDNDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   +V  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L       ++CG +H +A +   G++ S+G    GQLG G + +R  P  V    +L
Sbjct: 291 ---LMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK-GNWL 346

Query: 448 PRNIAC 453
           P +  C
Sbjct: 347 PYSTQC 352



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 7/175 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           ++++ CG RH+  V D G + T G    GQ GH       RP +  +L    +  ++ G 
Sbjct: 36  IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGE 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            HT+ ++ +G+VY +G    GQLG  G ++   VP+ +++  L   +   V+CG  HS  
Sbjct: 94  AHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKS--LSEIQIVQVACGYYHSLA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           L++  +V SWG NKYGQLGLG    + N P ++  + G     IA G  H+ +L 
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT 206



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ ++  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   ++A   P+      L+++    VSCG  H+  L + GQV +WG    GQL
Sbjct: 61  NDLGQLGH--EKARKRPE--HVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIV---QVACGYYHSLALSKGSEV 158


>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Loxodonta africana]
          Length = 1100

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 140/295 (47%), Gaps = 42/295 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVP 254
           P  V      K+   A G  HTL+ ++ G V+  G   EGQLGLG          I    
Sbjct: 74  PICVKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFT 133

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------I 294
           + H I  L  +A       L   G +     NS G+ G + +                 I
Sbjct: 134 SRHKIKQL--SAGANISAALTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTVGKPISWI 191

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN--DQLRPSYASSLMDIQVEQIAAGLWH 352
           +CG  HSA VT  G L TFG    G+ G  S    +  +P   S + + +V Q+A G  H
Sbjct: 192 SCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGISE-KVIQVACGGGH 250

Query: 353 TVCISVEGRVYVFGGNQFGQLGTG--VDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           TV ++ E  VY FG  +FGQLG G  + QA   P +LE   ++ ++ + +SCG  H+A++
Sbjct: 251 TVVLT-EKAVYTFGQGRFGQLGLGSFIFQAPE-PAILEH--VKDQKIRHISCGENHTALI 306

Query: 411 TEDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           T+ G + ++G  ++G+LGLG  +  ++ +P+L      F+   +ACG  H L+ A
Sbjct: 307 TDVGHMYTFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGCHMLIFA 361



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 2/168 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+A++T    L  FG   +GQ G GS +   RP    +L   +V+  A G  HT
Sbjct: 36  LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHT 95

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   L+ +      + K +S GA  SA LTED
Sbjct: 96  LVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLI-SFFTSRHKIKQLSAGANISAALTED 154

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
           G++  WG N  GQ+GL    +  +P  V + G     I+CG++H+  +
Sbjct: 155 GELFMWGDNSEGQIGLNSISNVYVPRQVTV-GKPISWISCGYYHSAFV 201



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 40/280 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----AASGKDR 271
           ++ G  HT +++   +++ +G    GQLGLGS+   V  P  +  L+      AA G++ 
Sbjct: 36  LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSK-SAVYRPICVKALKSEKVKLAACGRNH 94

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                  R  +K+++ G   SA +T+ 
Sbjct: 95  TLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANISAALTED 154

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  S ++   P   +  +   +  I+ G +H+  +++EG++Y FG 
Sbjct: 155 GELFMWGDNSEGQIGLNSISNVYVPRQVT--VGKPISWISCGYYHSAFVTMEGKLYTFGE 212

Query: 368 NQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
            + G+LG   +Q  N   P+L+      S++   V+CG  H+ VLTE   V ++G  ++G
Sbjct: 213 PECGKLGLPSEQLINHRKPQLVSGI---SEKVIQVACGGGHTVVLTEKA-VYTFGQGRFG 268

Query: 426 QLGLGDSIDRN-IPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           QLGLG  I +   P+++  +     R+I+CG  HT L+ +
Sbjct: 269 QLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITD 308



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 126/307 (41%), Gaps = 89/307 (28%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   + A +E G+L  WG  + EGQ  L S  +   P    +    S +  + G+ H   
Sbjct: 144 GANISAALTEDGELFMWGD-NSEGQIGLNSISNVYVPRQVTVGKPISWI--SCGYYHSAF 200

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           VT  G++YT+G  EC          G  G            LP+EQ           ++ 
Sbjct: 201 VTMEGKLYTFGEPEC----------GKLG------------LPSEQ-----------LIN 227

Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGV--KITKVAAGGRHTLILSDMGQVWGW 236
            RK                     P LV+   G+  K+ +VA GG HT++L++   V+ +
Sbjct: 228 HRK---------------------PQLVS---GISEKVIQVACGGGHTVVLTEKA-VYTF 262

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G G  GQLGLGS I   P P +   LEH    K                     ++ I+C
Sbjct: 263 GQGRFGQLGLGSFIFQAPEPAI---LEHVKDQK---------------------IRHISC 298

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTV 354
           G  H+A++TD G + TFG G +G+ G G  N  +Q  P+  S      +  +A G  H +
Sbjct: 299 GENHTALITDVGHMYTFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGCHML 358

Query: 355 CISVEGR 361
             ++  R
Sbjct: 359 IFAIPRR 365


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Acyrthosiphon
            pisum]
          Length = 4257

 Score =  106 bits (265), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 60/176 (34%), Positives = 102/176 (57%), Gaps = 6/176 (3%)

Query: 292  KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL- 350
            + I CG   + V+T  G +L+ G G YG+ GHG ++     +  S+L    + Q++  + 
Sbjct: 3429 QRIVCGQNCTFVLTSQGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIG 3488

Query: 351  --WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
               H++ ++  G V+ +G   FG+LG G ++ +  PKL+E+  L       V+CG +HSA
Sbjct: 3489 SDGHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIES--LYDVVVIQVACGHKHSA 3546

Query: 409  VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTLLLAE 463
            VL++DG+V  +G  ++G+LGLG  I++  P+ +   GFL  + IACG  HT+ + E
Sbjct: 3547 VLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTICIGE 3602



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 111/234 (47%), Gaps = 32/234 (13%)

Query: 203 PCLVTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           P    +N   KI +V++      H+L LSD G+V+ WG G  G+LG G            
Sbjct: 414 PVPKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGD----------- 462

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
                 A+ K+  L+  QG     GK     ++ ++ G RHSA VT  G L T+G G +G
Sbjct: 463 -----VATHKEPKLI--QGPF--IGKV----IELVSAGYRHSAAVTSDGQLYTWGEGDHG 509

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVD 378
           + GHG  N +  P+   SL D+ V  +A G  HT+  S +G  V+ FG    G+LG G  
Sbjct: 510 RLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNT 569

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
                P+ +E   L   + K V+ G   S  LT  G+V +WG  +   LG G S
Sbjct: 570 IRLYKPQKIEG--LRHYKIKKVAAGIHFSVALTCTGEVFTWG--QGSNLGCGSS 619



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 17/201 (8%)

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           E A    D P LVR            S V+++  G   + ++   G +   G   YG+ G
Sbjct: 357 EGATEVTDIPRLVRS----------LSDVQQVEAGQYCTFIIDTKGCVSACGKNSYGRLG 406

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLW---HTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            G++++Q  P   +  ++ +++Q+++      H++ +S  G VY +G   +G+LG G   
Sbjct: 407 LGNSSNQPVPKRIN--INCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVA 464

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
               PKL++ P +  K  ++VS G RHSA +T DGQ+ +WG   +G+LG GD   R IP+
Sbjct: 465 THKEPKLIQGPFI-GKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPT 523

Query: 440 LVPIHGFLPRN-IACGWWHTL 459
           LV     +P   +ACG  HTL
Sbjct: 524 LVKSLSDMPVGYVACGSTHTL 544



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 121/254 (47%), Gaps = 28/254 (11%)

Query: 216  KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            ++  G   T +L+  G V   G G  G+LG G    + P   +I  L+          ++
Sbjct: 3430 RIVCGQNCTFVLTSQGTVLSCGEGNYGRLGHGHSDSL-PNLTMISALQG--------FVI 3480

Query: 276  RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
             Q S  S G  G            HS  +T+ G + ++G G +G+ GHG+   Q +P   
Sbjct: 3481 TQVST-SIGSDG------------HSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLI 3527

Query: 336  SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILES 394
             SL D+ V Q+A G  H+  +S +G VYVFG  + G+LG G    +  P K++    L  
Sbjct: 3528 ESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKIVHKGFLN- 3586

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIAC 453
               K ++CG  H+  + E+  V ++G  + G+LG+G   D  +P  ++ ++G   +   C
Sbjct: 3587 --IKYIACGQNHTICIGEN-VVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYC 3643

Query: 454  GWWHTLLLAETTQI 467
            G   T+ L+E  ++
Sbjct: 3644 GNGFTMFLSEDGEL 3657



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 102/404 (25%), Positives = 155/404 (38%), Gaps = 114/404 (28%)

Query: 55   VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW- 113
            VCG  C F L +   G +++ G  +     Y   G HG +     LP   +++ A  G+ 
Sbjct: 3432 VCGQNCTFVLTSQ--GTVLSCGEGN-----YGRLG-HGHSDS---LPN-LTMISALQGFV 3479

Query: 114  -----------AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
                        H +++TE GEV++WG            DFG  G    +          
Sbjct: 3480 ITQVSTSIGSDGHSLALTETGEVFSWG----------DGDFGKLGHGNNE---------- 3519

Query: 163  EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
                           ++RK                     P L+     V + +VA G +
Sbjct: 3520 ---------------RQRK---------------------PKLIESLYDVVVIQVACGHK 3543

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL-LVRQGSVN 281
            H+ +LS  G+V+ +G    G+LGLG  I                  K RP  +V +G +N
Sbjct: 3544 HSAVLSQDGEVYVFGSAEHGKLGLGGHIN-----------------KKRPTKIVHKGFLN 3586

Query: 282  SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
                     +K IACG  H+  + +   +  FG G  G+ G GS  D   P    +L   
Sbjct: 3587 ---------IKYIACGQNHTICIGE-NVVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGK 3636

Query: 342  QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-- 399
             +++   G   T+ +S +G +Y  G +   Q  T V   E   KL+   I E +   V  
Sbjct: 3637 NIKKAYCGNGFTMFLSEDGELYSCGSDNL-QDATDVLYTE---KLIPEKIFEFQGQIVTD 3692

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            V+ G  H  VLT  G V +WG N  G LG G  +    P ++ I
Sbjct: 3693 VATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLPVQKPMIIQI 3736



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 86/329 (26%), Positives = 130/329 (39%), Gaps = 56/329 (17%)

Query: 41  PIPARLCGGDSWKDVCGG-GC-GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
           P+P R+      K V    GC G +LA S++G++ +WG  D     +     H E P+  
Sbjct: 414 PVPKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHKE-PKLI 472

Query: 99  PLPTEASVVK-AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
             P    V++  +AG+ H  +VT  G++YTWG            D G  G    D   + 
Sbjct: 473 QGPFIGKVIELVSAGYRHSAAVTSDGQLYTWG----------EGDHGRLG--HGDCNPR- 519

Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLV 206
             +PT     SD   G        T +   +     S           G+      P  +
Sbjct: 520 -FIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKI 578

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
                 KI KVAAG   ++ L+  G+V+ WG G    LG GS    + +P ++  L    
Sbjct: 579 EGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQG--SNLGCGSSEITLFSPAVVEDLM--- 633

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-S 325
                                +  + +I+ G  H   +T   A+  +G    GQCG G S
Sbjct: 634 ---------------------QQMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQGHS 672

Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           T+   RPS   +L   Q+ QI+AG  H+V
Sbjct: 673 TSPVSRPSKVINLEGKQINQISAGTSHSV 701



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 85/322 (26%), Positives = 120/322 (37%), Gaps = 58/322 (18%)

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
            H +++++ GEVY+WG            D+G  G     +T K+  L   Q P   K   
Sbjct: 436 GHSLALSDTGEVYSWG----------DGDYGKLGH-GDVATHKEPKLI--QGPFIGKVI- 481

Query: 174 EEVVKRRKTSSAREESENP------------ASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
            E+V      SA   S+                GD      P LV     + +  VA G 
Sbjct: 482 -ELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGS 540

Query: 222 RHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
            HTL  S D   VW +G G  G+LG G+ I++   P  I  L H                
Sbjct: 541 THTLACSRDGNTVWSFGSGDNGKLGHGNTIRLY-KPQKIEGLRHYK-------------- 585

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
                     +K++A G   S  +T  G + T+G G    CG  S      P+    LM 
Sbjct: 586 ----------IKKVAAGIHFSVALTCTGEVFTWGQGSNLGCG-SSEITLFSPAVVEDLMQ 634

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
             +  I+ G  H + ++    VY +G N  GQ G G      V +  +   LE K+   +
Sbjct: 635 QMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQG-HSTSPVSRPSKVINLEGKQINQI 693

Query: 401 SCGARHSAVLTE---DGQVLSW 419
           S G  HS   T    D Q   W
Sbjct: 694 SAGTSHSVAWTTLPPDRQTNVW 715



 Score = 47.0 bits (110), Expect = 0.022,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 9/111 (8%)

Query: 363  YVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
            Y++G  + GQLG T V Q  N+   ++  I   K A+ + CG   + VLT  G VLS G 
Sbjct: 3395 YLWGNGRNGQLGDTAVGQCINIWSPIK--IQNFKIAQRIVCGQNCTFVLTSQGTVLSCGE 3452

Query: 422  NKYGQLGLG--DSIDRNIPSLVPIHGFLPRNIACGW---WHTLLLAETTQI 467
              YG+LG G  DS+  N+  +  + GF+   ++       H+L L ET ++
Sbjct: 3453 GNYGRLGHGHSDSLP-NLTMISALQGFVITQVSTSIGSDGHSLALTETGEV 3502



 Score = 42.0 bits (97), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            G  +T VA G  H L+L+  G VW WG   EG LG G  +  V  P +I  L
Sbjct: 3687 GQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLP-VQKPMIIQIL 3737



 Score = 40.8 bits (94), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 56/109 (51%), Gaps = 8/109 (7%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           V+++G N   Q   G  +  ++P+L+ +        + V  G   + ++   G V + G 
Sbjct: 344 VFMWGSNSSNQHAEGATEVTDIPRLVRS----LSDVQQVEAGQYCTFIIDTKGCVSACGK 399

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAETTQI 467
           N YG+LGLG+S ++ +P  + I+  + +   +  C   H+L L++T ++
Sbjct: 400 NSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCD-GHSLALSDTGEV 447


>gi|359473138|ref|XP_003631252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 2
           [Vitis vinifera]
          Length = 526

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 119/236 (50%), Gaps = 29/236 (12%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGK 269
           G++I + AAG   T+++SD GQV+ +G    G+   G +  K+V TP L+  L++     
Sbjct: 188 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNI---- 243

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                               +V + A G   +AV++  G + TF WG   + GH +  + 
Sbjct: 244 --------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEAND 283

Query: 330 LRPS-YASSLMDIQVEQIAAGLWHTVCISVEGR---VYVFGGNQFGQLGTGVDQAENVPK 385
           L P     +L +I V QIAAG  + + ++ +     VY  G    G+LG G    E  P+
Sbjct: 284 LEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPR 343

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           L+E   + + +  VV+ GA H+AV+  DG+V +WGW +YG LG G+    ++P +V
Sbjct: 344 LIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVV 399



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 10/169 (5%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT  GA+ +FG    GQ GHG+T+++ RP    SL  I++ Q AAG   T+ IS  
Sbjct: 148 HSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDA 207

Query: 360 GRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           G+VY FG + FG+   GV   + V  P+L+E+  L++      + G   +AVL+ +G+V 
Sbjct: 208 GQVYAFGKDSFGEAEYGVQGTKLVTTPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 265

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLLA 462
           ++ W    +LG     +   P   P+ G L       IA G+ + L LA
Sbjct: 266 TFSWGNDAKLGHQTEANDLEPH--PLLGALENIPVVQIAAGYCYLLALA 312



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 169/436 (38%), Gaps = 108/436 (24%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHC 116
           G G ++A +  G + ++GS +  GQ  L  G   E   P  + +     +++AAAG    
Sbjct: 145 GPGHSIAVTVKGAVYSFGS-NSSGQ--LGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRT 201

Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
           + +++AG+VY +G                     KDS G                     
Sbjct: 202 MLISDAGQVYAFG---------------------KDSFG--------------------- 219

Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
                      E+E    G +  T +P LV     + + + A G   T +LS  G+V+ +
Sbjct: 220 -----------EAEYGVQGTKLVT-TPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 267

Query: 237 GYGGEGQLGLGSRIK-MVPTPHL-----IPCLEHAA--------SGKDRPLLVRQGSVNS 282
            +G + +LG  +    + P P L     IP ++ AA        + +   + V       
Sbjct: 268 SWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGL 327

Query: 283 SGKAGRSYVKE-------------------IACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
            GK G     +                   +A G  H+AVV   G + T+GWG YG  GH
Sbjct: 328 GGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGH 387

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG-------GNQFGQLGTG 376
           G+   +  P    +L++++   +A G + T  +S +G VY FG       G+  G  G G
Sbjct: 388 GNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQG 447

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGAR------HSAVLTEDGQVLSWGWNKYGQLG-- 428
              A  +   L T + + K   V            H+  LTE G++ ++G    GQLG  
Sbjct: 448 NRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVE 507

Query: 429 -LGDSIDRNIPSLVPI 443
            + +  +R  P  V I
Sbjct: 508 LVANQTERGNPERVDI 523



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ ++V+G VY FG N  GQLG G    E  P+ + +  LE  R    + GA
Sbjct: 141 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRS--LEGIRIIQAAAGA 198

Query: 405 RHSAVLTEDGQVLSWGWNKYGQ 426
             + ++++ GQV ++G + +G+
Sbjct: 199 GRTMLISDAGQVYAFGKDSFGE 220


>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 136/293 (46%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKP-EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  +    +   P   S + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E + PK++E   +  +    +SCG  H+A++T+
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHTALITD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  +  IP+L      F+ + +ACG  H ++ A
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   ++     E K  K +S G+  SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHSAFVT 206



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 50/285 (17%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ +++   +++ +G    GQLGLGS+   +  P  +  L     + AA G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                     +K+++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  + ++   P   +  +   V  I+ G +H+  ++ +G +YVFG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 368 NQFGQLGTGVDQAENVPKLL----ETPILES---KRAKVVSCGARHSAVLTEDGQVLSWG 420
            + G+LG        +P  L     TP L S   ++   V+CG  H+ VLTE+  V ++G
Sbjct: 217 PENGKLG--------LPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENA-VYTFG 267

Query: 421 WNKYGQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
             ++GQLGLG  + + + P ++  I       I+CG  HT L+ +
Sbjct: 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITD 312



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 28/162 (17%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P LV+  P  K+ +VA GG HT++L++   V+ +G G  GQLGLG+ +     P +I  
Sbjct: 234 TPQLVSEIP-EKVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           +      +D+ +               SY   I+CG  H+A++TD G + TFG G +G+ 
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGKL 327

Query: 322 GHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           G G  N  +   P+  S+ +   V+ +A G  H V  +   R
Sbjct: 328 GLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHR 369


>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
          Length = 1152

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 136/293 (46%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKP-EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  +    +   P   S + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E + PK++E   +  +    +SCG  H+A++T+
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHTALITD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  +  IP+L      F+ + +ACG  H ++ A
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   ++     E K  K +S G+  SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHSAFVT 206



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 50/285 (17%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ +++   +++ +G    GQLGLGS+   +  P  +  L     + AA G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                     +K+++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  + ++   P   +  +   V  I+ G +H+  ++ +G +YVFG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 368 NQFGQLGTGVDQAENVPKLL----ETPILES---KRAKVVSCGARHSAVLTEDGQVLSWG 420
            + G+LG        +P  L     TP L S   ++   V+CG  H+ VLTE+  V ++G
Sbjct: 217 PENGKLG--------LPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENA-VYTFG 267

Query: 421 WNKYGQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
             ++GQLGLG  + + + P ++  I       I+CG  HT L+ +
Sbjct: 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITD 312



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 28/162 (17%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P LV+  P  K+ +VA GG HT++L++   V+ +G G  GQLGLG+ +     P +I  
Sbjct: 234 TPQLVSEIP-EKVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           +      +D+ +               SY   I+CG  H+A++TD G + TFG G +G+ 
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGKL 327

Query: 322 GHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           G G  N  +   P+  S+ +   V+ +A G  H V  +   R
Sbjct: 328 GLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHR 369


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGG+H+A+VT  G + ++G    G+ GHG  +D   P    SL +  +E +A G 
Sbjct: 314 VQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGE 373

Query: 351 WHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G     +G LG G   +  VPK +  P LE      +SCG  H+A
Sbjct: 374 YHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 432

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           V+T  GQ+ ++G   +G LG GD    ++P  +  + G      ACG WHT  + E
Sbjct: 433 VVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVE 488



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 124/258 (48%), Gaps = 43/258 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R K V  P  I  L        
Sbjct: 418 GIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDR-KSVSLPREIESL-------- 468

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                         K  R+   + ACG  H+A V +             G L T+G G  
Sbjct: 469 --------------KGLRTV--QAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 512

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+   +L++    Q+A G   TV +S  G VY  G   +GQLG    
Sbjct: 513 GRLGHGDKESKLVPTCVVTLVEPNC-QVACGHSMTVALSRSGHVYTMGSCVYGQLGN--T 569

Query: 379 QAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           QA+  +P  +E  + +S   + ++CGA H AVLT   +V +WG    G+LG GD+ DRN 
Sbjct: 570 QADGKLPIRVEGKLSKS-FVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNT 628

Query: 438 PSLV-PIHGFLPRNIACG 454
           P+LV  +     ++IACG
Sbjct: 629 PTLVEALKDKQVKSIACG 646



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S + + V+ IA G  H   ++ +G V+ +G    G+LG GVD     PKL+
Sbjct: 299 DSLLPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLI 358

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG---WNKYGQLGLGDSIDRNIPSLV--P 442
           E+  L +   ++V+CG  H+  +T  G + +WG   +N YG LG G+ +   +P  V  P
Sbjct: 359 ES--LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYN-YGLLGHGNQVSHWVPKRVNGP 415

Query: 443 IHGFLPRNIACGWWHTLLLAETTQI 467
           + G    +I+CG WHT ++  + Q+
Sbjct: 416 LEGIHVSSISCGPWHTAVVTSSGQL 440



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 148/355 (41%), Gaps = 67/355 (18%)

Query: 53  KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAA 110
           +++  GG   AL T + G++ +WG   +E    L  G   + P P  + +    ++   A
Sbjct: 315 QNIACGGKHAALVTKQ-GEVFSWG---EESGGRLGHGVDSDVPHPKLIESLSNTNIELVA 370

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS--TGKQSALPTEQAPPS 168
            G  H  +VT +G++YTWG          T ++G  G   + S    K+   P E    S
Sbjct: 371 CGEYHTCAVTLSGDLYTWG--------DGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS 422

Query: 169 DKRAG---EEVVKRRKTSSAREESENPAS------GDEFFTLSPCLVTLNPGVKITKVAA 219
               G     VV    TSS +  +    +      GD      P  +    G++  + A 
Sbjct: 423 SISCGPWHTAVV----TSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAAC 478

Query: 220 GGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPHLI---PCLE 263
           G  HT  + ++            G+++ WG G +G+LG G +  K+VPT  +    P  +
Sbjct: 479 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPNCQ 538

Query: 264 HAASGKDRPLLVRQGSVNS----------------------SGKAGRSYVKEIACGGRHS 301
            A        L R G V +                       GK  +S+V+EIACG  H 
Sbjct: 539 VACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKSFVEEIACGAYHV 598

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           AV+T    + T+G G  G+ GHG TND+  P+   +L D QV+ IA G   T  I
Sbjct: 599 AVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 653


>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
           partial [Apis florea]
          Length = 647

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 44/263 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G KI ++ AG  H+L L+  G V+ WG   EGQLGL     +V  P  +   E       
Sbjct: 133 GSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPE------- 185

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                               VK+I  G  HS  +T+ G +   G    G+ G       +
Sbjct: 186 -------------------PVKQINTGYYHSIFLTENGLVYVCGESESGKLG-------I 219

Query: 331 RPSYASSLMDIQVE------QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NV 383
             ++++ ++  Q++       +A G  HTV ++ +  +Y  G N  GQLG G +  E ++
Sbjct: 220 DINFSTQIVPKQMQLPSPVIHVACGGHHTVILTEKDNLYCTGSNSSGQLGLGTNVTELHI 279

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           PKLL    L++++   +SCG  H+A+LTE G++ + G  ++G+LGL ++ + N+  L  +
Sbjct: 280 PKLLPRGALKNEKISHISCGESHTAILTESGKLYTCGDGRHGKLGLEEN-ENNVHELTFV 338

Query: 444 HGF---LPRNIACGWWHTLLLAE 463
             +      NI+CG  HT+L+ +
Sbjct: 339 QRYKELFISNISCGGCHTILIGQ 361



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 130/269 (48%), Gaps = 37/269 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           C+  L P  K+T VA G  HTLI +   +++  G   EGQLG G  I  +     IP L 
Sbjct: 70  CVKVLKPE-KVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRG--ISAIGDSASIPVL- 125

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
                           V  SG  G S + +I  G  HS  +T  G +  +G  L GQ G 
Sbjct: 126 ----------------VYDSGPTG-SKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGL 168

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAEN 382
              +  +       + +  V+QI  G +H++ ++  G VYV G ++ G+LG  ++   + 
Sbjct: 169 PDISGLVNKPTKVHIPE-PVKQINTGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQI 227

Query: 383 VPKLLE--TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI-DRNIPS 439
           VPK ++  +P++       V+CG  H+ +LTE   +   G N  GQLGLG ++ + +IP 
Sbjct: 228 VPKQMQLPSPVIH------VACGGHHTVILTEKDNLYCTGSNSSGQLGLGTNVTELHIPK 281

Query: 440 LVPIHGFLPR----NIACGWWHTLLLAET 464
           L+P  G L      +I+CG  HT +L E+
Sbjct: 282 LLP-RGALKNEKISHISCGESHTAILTES 309



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 15/186 (8%)

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
           R  V  I+CG  HSAV+  +G L  FG   +GQ G G  N   +PS    L   +V  +A
Sbjct: 24  RDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVA 83

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVD---QAENVPKLL-ETPILESKRAKVVSCG 403
            G  HT+  +V  +++  G +Q GQLG G+     + ++P L+ ++    SK  ++V+ G
Sbjct: 84  CGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSASIPVLVYDSGPTGSKIVQIVA-G 142

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLP---RNIACGWWHT 458
           + HS  LT DG V +WG N  GQLGL D     I  LV  P    +P   + I  G++H+
Sbjct: 143 SHHSLALTSDGNVFAWGSNLEGQLGLPD-----ISGLVNKPTKVHIPEPVKQINTGYYHS 197

Query: 459 LLLAET 464
           + L E 
Sbjct: 198 IFLTEN 203


>gi|327289459|ref|XP_003229442.1| PREDICTED: regulator of chromosome condensation-like [Anolis
           carolinensis]
          Length = 420

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 175/446 (39%), Gaps = 75/446 (16%)

Query: 26  GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
           G  P     K P L  +P ++   ++       G    +  +E+GK+ T+G  +DEG   
Sbjct: 44  GLGPNVMARKRPALVQLPEKIIQAEA-------GGVHTVCLTETGKIYTFG-CNDEGALG 95

Query: 86  LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
             + + G    P  +  +  VV+ +AG +H  ++TE G V+ WG                
Sbjct: 96  RDTSEEGSESTPGLVDLKEKVVQVSAGDSHTAALTEDGRVFIWG---------------- 139

Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
             +F +D  G    L    AP    + GEE V                        SP  
Sbjct: 140 --AF-RDENGVIGLL----AP----QKGEENVG-----------------------SPLP 165

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
           V L   V + K+A+G  H  ++S  G ++  G G  GQLG       VP           
Sbjct: 166 VELQLDVPVVKIASGSHHLALVSMAGNLYTCGCGDNGQLG------RVPQVFTARGGRRG 219

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                 P  +   SV   G   +  ++++ CG   +  +T  G ++ FG   Y Q G   
Sbjct: 220 LKLLLLPQTI---SVKQRGCKTKGRIRDVFCGSYSTLAITQEGHVIGFGLSNYYQLGSQG 276

Query: 326 TNDQLRPSYASSLMDIQVE--QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
                 P   ++  +      + +AG  HTVC+  EG VY  G   +G LG G   AE  
Sbjct: 277 IETYYLPKILTAFKNSSRSWVKFSAGQHHTVCLDSEGTVYSLGRADYGMLGLGQGSAE-- 334

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            K   T I    ++  V+CG R    +TEDG+  +WG     QLG G+  D   P  +  
Sbjct: 335 -KATPTAIPGVPKSSSVACGERVGFAVTEDGRAFAWGMGSNLQLGTGEEDDAWSPVQMSG 393

Query: 444 HGFLPR---NIACGWWHTLLLAETTQ 466
                R   +++ G  HT+LL +  Q
Sbjct: 394 QQLENRTVLSVSGGGQHTVLLVKDKQ 419



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 34/221 (15%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           VK TKV+    H    ++ G +   G G  GQLGLG  +     P L+   E        
Sbjct: 15  VKRTKVS----HPTHQTEPGLLLTLGQGDLGQLGLGPNVMARKRPALVQLPEK------- 63

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                              + +   GG H+  +T+ G + TFG    G  G  ++ +   
Sbjct: 64  -------------------IIQAEAGGVHTVCLTETGKIYTFGCNDEGALGRDTSEEGSE 104

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG--NQFGQLGTGVDQA--ENVPKLL 387
            +     +  +V Q++AG  HT  ++ +GRV+++G   ++ G +G    Q   ENV   L
Sbjct: 105 STPGLVDLKEKVVQVSAGDSHTAALTEDGRVFIWGAFRDENGVIGLLAPQKGEENVGSPL 164

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
              +        ++ G+ H A+++  G + + G    GQLG
Sbjct: 165 PVELQLDVPVVKIASGSHHLALVSMAGNLYTCGCGDNGQLG 205


>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
 gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
          Length = 413

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 122/285 (42%), Gaps = 42/285 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-----PCLEHAASGKDR 271
           V+ GG HTLIL+D G+V+  G    GQLG+  + +    P  +     PC+  AA     
Sbjct: 66  VSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPDPCVHIAAGRYHS 125

Query: 272 PLLVRQGSV-----NSSGKAGRS-------------------YVKEIACGGRHSAVVTDA 307
             +   G       NS G+ G                      +K +A G  HS  + + 
Sbjct: 126 AAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAET 185

Query: 308 GALLTFGWGLYGQCGHGST---------NDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
           G +L++G   +G  GHG            ++  P     L  +Q+  ++AGL H+ C   
Sbjct: 186 GQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACADD 245

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            G +Y FG     QLG G +   + P     PI +  R   +SCG  H+  +T+DG + +
Sbjct: 246 SGTIYSFGQGSMCQLGLGNNNDASQP----CPIPDLPRVSSISCGGYHTGAITQDGDIYT 301

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           WG N++G LG G         L  +       I+CGW HT  +++
Sbjct: 302 WGSNEHGCLGSGFRASSKPLRLESLAEAFMSEISCGWKHTAAISD 346



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 127/278 (45%), Gaps = 51/278 (18%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP--------TPHLIPCL 262
           G+++  +A G  H+L L++ GQV  WG    G LG G               TP +I CL
Sbjct: 166 GMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCL 225

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           E                        +  ++ ++ G  HSA   D+G + +FG G   Q G
Sbjct: 226 E------------------------KLQIRSVSAGLVHSACADDSGTIYSFGQGSMCQLG 261

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            G+ ND  +P     L   +V  I+ G +HT  I+ +G +Y +G N+ G LG+G  +A +
Sbjct: 262 LGNNNDASQPCPIPDLP--RVSSISCGGYHTGAITQDGDIYTWGSNEHGCLGSGF-RASS 318

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW------------NKYGQLGLG 430
            P  LE+  L       +SCG +H+A ++ DG + SWGW            +  GQLG+G
Sbjct: 319 KPLRLES--LAEAFMSEISCGWKHTAAIS-DGYIFSWGWGGSYGTYATQAESSGGQLGVG 375

Query: 431 DSIDRNIPSLVPIHGFLPR-NIACGWWHTLLLAETTQI 467
              D   P  + +   L   +++CG+ HT  + E  +I
Sbjct: 376 TDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILEEIEI 413



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 126/273 (46%), Gaps = 47/273 (17%)

Query: 236 WGYGGEGQLGL---GSRIKMVPTPHL---IPCLEHAASGKDRPLLVRQGSV-----NSSG 284
           WG G +G+LGL   GS+ + V    L    PC   +  G    +L  +G V     NSSG
Sbjct: 33  WGNGDQGRLGLSESGSQFEPVLCRALESHEPC-SVSCGGAHTLILTDKGRVFATGLNSSG 91

Query: 285 KAGRSYVKE-----------------IACGGRHSAVVTDAGALLTFGWGLYGQCGHG--S 325
           + G    +E                 IA G  HSA +T +G    +G    GQ G G  +
Sbjct: 92  QLGVPLKRESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRA 151

Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG--------- 376
            +  + P    SL  ++++ +A G  H++ ++  G+V  +G N+FG LG G         
Sbjct: 152 KSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFF 211

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            D  E  P+++    LE  + + VS G  HSA   + G + S+G     QLGLG++ D +
Sbjct: 212 KDTNEYTPRIIHC--LEKLQIRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDAS 269

Query: 437 IPSLVPIHGFLPR--NIACGWWHTLLLAETTQI 467
            P  +P    LPR  +I+CG +HT  + +   I
Sbjct: 270 QPCPIPD---LPRVSSISCGGYHTGAITQDGDI 299



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 32/201 (15%)

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
           L  +  V  SGKAG+ +V                     +G G  G+ G   +  Q  P 
Sbjct: 13  LTAKNKVELSGKAGKRWVA-------------------LWGNGDQGRLGLSESGSQFEPV 53

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL----LET 389
              +L   +   ++ G  HT+ ++ +GRV+  G N  GQLG  + +  +   +       
Sbjct: 54  LCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPD 113

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG---DSIDRNIPSLVPIHGF 446
           P +       ++ G  HSA +T  G+   WG N  GQLGLG    S+      +  + G 
Sbjct: 114 PCVH------IAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGM 167

Query: 447 LPRNIACGWWHTLLLAETTQI 467
             + +A G  H+L LAET Q+
Sbjct: 168 RLKALALGTDHSLGLAETGQV 188



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 123/329 (37%), Gaps = 79/329 (24%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGE----TPEPFPLPTEASVVKAAAGWAHCVSVT 120
           A + SG+   WG  + EGQ  L  GK  +    TP+         +   A G  H + + 
Sbjct: 127 AITSSGETYVWGR-NSEGQ--LGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLA 183

Query: 121 EAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           E G+V +WG     C+   ++T  F     F KD         T +  P      E++  
Sbjct: 184 ETGQVLSWGTNRFGCLGHGEMTGFF----DFFKD---------TNEYTPRIIHCLEKLQI 230

Query: 179 RRKT-----SSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGR 222
           R  +     S+  ++S    S           G+      PC +   P  +++ ++ GG 
Sbjct: 231 RSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLP--RVSSISCGGY 288

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           HT  ++  G ++ WG    G LG G R    P       LE  A                
Sbjct: 289 HTGAITQDGDIYTWGSNEHGCLGSGFRASSKPLR-----LESLA---------------- 327

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW----GLY--------GQCGHGSTNDQL 330
                 +++ EI+CG +H+A ++D G + ++GW    G Y        GQ G G+  D  
Sbjct: 328 -----EAFMSEISCGWKHTAAISD-GYIFSWGWGGSYGTYATQAESSGGQLGVGTDFDFF 381

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            P        +    ++ G  HT  I  E
Sbjct: 382 EPVPIEMDDRLSALHVSCGFNHTAAILEE 410


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 139/318 (43%), Gaps = 59/318 (18%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VP 254
           +  ++L P L+     + +  VA GG H  I++  G+V+ WG G  G+  LG RI M + 
Sbjct: 288 NSIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGR--LGQRIDMDIS 345

Query: 255 TPHLIPCL----------------------EHAASGKDRPL--LVRQGSVNSSGKAGR-- 288
           +P ++  L                      E  A G D     LV +G + S     +  
Sbjct: 346 SPKIVDTLSDIRVKNVACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLS 405

Query: 289 -----SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
                  +  IACG  H+A+V+  G L T+G G +G  GHGS +    P    SL  + V
Sbjct: 406 LPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCV 465

Query: 344 EQIAAGLWHTVCI-----------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI- 391
             +A G WHT  I           +  G+++ +G    G+LG     A+NV KL+ T + 
Sbjct: 466 RSVACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLG----HADNVNKLVPTCVS 521

Query: 392 -LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN 450
            L       VSCG   +  LT  G+V + G  KYGQLG     DR     V + G L + 
Sbjct: 522 QLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDR----AVVVEGMLKQE 577

Query: 451 ----IACGWWHTLLLAET 464
               I+CG +H  +L  +
Sbjct: 578 YVKMISCGSYHVAVLTSS 595



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 171/430 (39%), Gaps = 84/430 (19%)

Query: 39  LSPIPARLCGGDSWKDVC--GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
           + P  + L G +  KDV   GGG G  +                  + ++ +  +   P+
Sbjct: 251 IMPPASALVGNNVLKDVMVWGGGIGCLVGIV--------------NERFVQNSIYSLVPK 296

Query: 97  PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC-VPSAKVTRDFGSAGSFQKDSTG 155
                    V   A G  H   VT+ GEVY WG  +C     ++  D  S          
Sbjct: 297 LLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISS---------- 346

Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-------------LS 202
                P      SD R          T +  +  E  A G++                L+
Sbjct: 347 -----PKIVDTLSDIRVKNVACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLT 401

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
             L     G+ I+ +A G  HT I+S  G+++ +G G  G LG GS      +P  +  L
Sbjct: 402 HKLSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGS-YHSFSSPKEVESL 460

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV-----------TDAGALL 311
           +                           V+ +ACG  H+A +           T  G L 
Sbjct: 461 KGLC------------------------VRSVACGTWHTAAIIEISAERFKYNTSTGKLF 496

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           T+G    G+ GH    ++L P+  S L+D    Q++ G   T+ ++  G+V+  G  ++G
Sbjct: 497 TWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYG 556

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG      ++   ++E  +L+ +  K++SCG+ H AVLT  G V +WG  + G+LGLGD
Sbjct: 557 QLGN--PHVKDRAVVVE-GMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGD 613

Query: 432 SIDRNIPSLV 441
           + +R  P  V
Sbjct: 614 TENRYTPCFV 623



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 26/170 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
            D    L P  V+        +V+ G   TL L++MG+V+  G    GQLG         
Sbjct: 509 ADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLG--------- 559

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            PH+          KDR ++V        G   + YVK I+CG  H AV+T +G++ T+G
Sbjct: 560 NPHV----------KDRAVVVE-------GMLKQEYVKMISCGSYHVAVLTSSGSVYTWG 602

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
            G  G+ G G T ++  P +  +L D QV+ I  G   TV I +   + +
Sbjct: 603 KGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAICLHKPISI 652



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 127/333 (38%), Gaps = 64/333 (19%)

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
           +P+     ++  V   A G  H  ++T++GEVY WG      +     D    G  +   
Sbjct: 346 SPKIVDTLSDIRVKNVACGEYHTCALTDSGEVYAWG------NDVSCSDLVDEGRIRSQW 399

Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL----------SP 203
              + +LP E    S    GE       T+           GD  F +          SP
Sbjct: 400 LTHKLSLPVEGISISSIACGE-----WHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSP 454

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDM-----------GQVWGWGYGGEGQLGLGSRI-K 251
             V    G+ +  VA G  HT  + ++           G+++ WG   EG+LG    + K
Sbjct: 455 KEVESLKGLCVRSVACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNK 514

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
           +VPT     C+           LV    V            +++CG   +  +T+ G + 
Sbjct: 515 LVPT-----CVSQ---------LVDYDFV------------QVSCGRMMTLALTNMGKVF 548

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQF 370
             G   YGQ G+    D  R      ++  + V+ I+ G +H   ++  G VY +G  + 
Sbjct: 549 AMGSAKYGQLGNPHVKD--RAVVVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGEN 606

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
           G+LG G  +    P  +E   L  ++   ++CG
Sbjct: 607 GELGLGDTENRYTPCFVEA--LRDRQVDTITCG 637


>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
 gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
          Length = 646

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 135/293 (46%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  +    +   P   S + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E   PK++E   +  +    +SCG  H+A++T+
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHTALITD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  +  IP+L      F+ + +ACG  H ++ A
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   ++     E K  K +S G+  SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHSAFVT 206



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 42/281 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ +++   +++ +G    GQLGLGS+   +  P  +  L     + AA G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                     +K+++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  + ++   P   +  +   V  I+ G +H+  ++ +G +YVFG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 368 NQFGQLGTGVDQAEN--VPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            + G+LG       N   P+L+ E P    ++   V+CG  H+ VLTE+  V ++G  ++
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIP----EKVIQVACGGEHTVVLTENA-VYTFGLGQF 271

Query: 425 GQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           GQLGLG  + + + P ++  I       I+CG  HT L+ +
Sbjct: 272 GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITD 312



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 28/162 (17%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P LV+  P  K+ +VA GG HT++L++   V+ +G G  GQLGLG+ +     P +I  
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           +      +D+ +               SY   I+CG  H+A++TD G + TFG G +G+ 
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGKL 327

Query: 322 GHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           G G  N  +   P+  S+ +   V+ +A G  H V  +   R
Sbjct: 328 GLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHR 369


>gi|151556979|gb|AAI49505.1| RCC2 protein [Bos taurus]
 gi|296489973|tpg|DAA32086.1| TPA: regulator of chromosome condensation 2 [Bos taurus]
          Length = 402

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 54/284 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P L+  L H    
Sbjct: 145 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLVEGLSH---- 199

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 200 --------------------EVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 239

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 240 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 298

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 299 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 358

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAETTQ 466
           +LG  +  D  +P LV +  F  R    I  G+  +  ++E  Q
Sbjct: 359 RLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGQ 402



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 102/254 (40%), Gaps = 49/254 (19%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P LV       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 174 RNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 233

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 234 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 268

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 269 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 328

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 329 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 388

Query: 402 CGARHSAVLTEDGQ 415
            G   S  ++E GQ
Sbjct: 389 AGYTCSFAVSEVGQ 402



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           SC A HS ++T +G++ SWG N+ GQLG GD+     P LV  +   +  + ACG  HTL
Sbjct: 155 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTL 213

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 214 ALTETGSV 221


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 40/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G++I  V+ G  HT +++ MGQ++ +G G  G LG G+ +K +  P  +  L        
Sbjct: 183 GLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGN-VKSISCPREVESL-------- 233

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD-----------AGALLTFGWGLYG 319
                          +G   +  +ACG  H+A + +           AG L T+G G   
Sbjct: 234 ---------------SGLKTIA-VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG    +L+P+  +SL+D    ++A G   TV ++  G+V+  G + +GQLG     
Sbjct: 278 RLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGN--PN 335

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           ++  P L+E  I  S+    ++CG+ H AVLT   +V +WG    G+LG GD  DR +P+
Sbjct: 336 SDGRPCLVEDKI-ASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPT 394

Query: 440 LV-PIHGFLPRNIACG 454
            V  +     R+IACG
Sbjct: 395 TVEALRDRAVRHIACG 410



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  + CG RH+++VT  G + T+G    G+ GHG+  D + P    SL    ++ +A G 
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGE 138

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  ++  G +Y +G   +  G LG G D    +P+ +  P LE  +   VSCG  H+A
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTA 197

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           ++T  GQ+ ++G   +G LG G+    + P  V  + G     +ACG WHT  + E
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAIVE 253



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 70/175 (40%), Gaps = 28/175 (16%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G+VW  G    GQLG         
Sbjct: 282 GDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG--------- 332

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       +   RP LV         K    +V +IACG  H AV+T    + T+G
Sbjct: 333 ----------NPNSDGRPCLVED-------KIASEHVLQIACGSYHVAVLTSRSEVFTWG 375

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
            G  G+ GHG   D+  P+   +L D  V  IA G   T  I +    +V G +Q
Sbjct: 376 KGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACGANFTAAICLHK--WVSGADQ 428


>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
 gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 2 [Bos taurus]
          Length = 527

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEV 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L+SK    ++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQSKVVVNIACGQMC 192

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
           S  +   G+V  WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 193 SMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 252

Query: 466 QI 467
           Q+
Sbjct: 253 QV 254



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 122/251 (48%), Gaps = 28/251 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+    +
Sbjct: 57  GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGL 116

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
              H+                    S N S K     V E+ACG  HS V+T  G +  +
Sbjct: 117 VPYHI--------------------STNLSNKQ----VIEVACGSYHSLVLTSDGEVFAW 152

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVE-QIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G GST +Q  P   +  +  +V   IA G   ++ +   G V+V+G N  GQ
Sbjct: 153 GYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQ 212

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+ 
Sbjct: 213 LGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 433 IDRNIPSLVPI 443
            +++ P+ V +
Sbjct: 271 SNQSYPTPVVV 281



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 111/225 (49%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           L P  ++ N   K + +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +
Sbjct: 116 LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL+                           V  IACG   S  V + G +  +G+   
Sbjct: 175 TGCLQSKV------------------------VVNIACGQMCSMAVVNTGEVFVWGYNGN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G GS+ +Q  P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG  
Sbjct: 211 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
             ++ P    TP++  K    ++ +C + H SA  T+ G V  WG
Sbjct: 271 SNQSYP----TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 42/238 (17%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P+ 
Sbjct: 65  PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNAGLVPYH 120

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG             + ++G     ST  
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 167

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
           Q  +P         +    +   +  S A   +                 +SG++    +
Sbjct: 168 Q-PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQ---PT 223

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           PC V    G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++     PTP ++
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 281



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A   +G++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258


>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
           mutus]
          Length = 544

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 91  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEV 150

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L+SK    ++CG   
Sbjct: 151 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQSKVVVNIACGQMC 209

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
           S  +   G+V  WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 210 SMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 269

Query: 466 QI 467
           Q+
Sbjct: 270 QV 271



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 122/251 (48%), Gaps = 28/251 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+    +
Sbjct: 74  GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGL 133

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
              H+                    S N S K     V E+ACG  HS V+T  G +  +
Sbjct: 134 VPYHI--------------------STNLSNKQ----VIEVACGSYHSLVLTSDGEVFAW 169

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVE-QIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G GST +Q  P   +  +  +V   IA G   ++ +   G V+V+G N  GQ
Sbjct: 170 GYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQ 229

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+ 
Sbjct: 230 LGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 287

Query: 433 IDRNIPSLVPI 443
            +++ P+ V +
Sbjct: 288 SNQSYPTPVVV 298



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 33/212 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP-CLEHAASGKDR 271
           ++ +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +  CL+        
Sbjct: 146 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRVTGCLQSKV----- 199

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                              V  IACG   S  V + G +  +G+   GQ G GS+ +Q  
Sbjct: 200 -------------------VVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPT 240

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG    ++ P    TP+
Sbjct: 241 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP----TPV 296

Query: 392 LESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
           +  K    ++ +C + H SA  T+ G V  WG
Sbjct: 297 VVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 328



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 42/238 (17%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P+ 
Sbjct: 82  PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNAGLVPYH 137

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG+              ++G     ST  
Sbjct: 138 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-------------NNSGQVGSGSTAN 184

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
           Q  +P         +    +   +  S A   +                 +SG++    +
Sbjct: 185 Q-PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQ---PT 240

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           PC V    G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++     PTP ++
Sbjct: 241 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 298



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A   +G++  WG  
Sbjct: 166 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGY- 224

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 225 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 275


>gi|417402228|gb|JAA47967.1| Hypothetical protein [Desmodus rotundus]
          Length = 520

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 54/282 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 145 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSH---- 199

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 200 --------------------EVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 239

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 240 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 298

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 299 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 358

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAET 464
           +LG  +  D  +P LV +  F  R    I  G+  +  ++E 
Sbjct: 359 RLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEV 400



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 56/307 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 174 RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 233

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 234 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 268

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 269 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 328

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 329 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 388

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLL 460
            G   S  ++E G +  WG     +           P  V  + G+  R++ACG    ++
Sbjct: 389 AGYTCSFAVSEVGGLFFWGATNTSREST------MYPKAVQDLCGWRIRSLACGKSSIIV 442

Query: 461 LAETTQI 467
            A+ + I
Sbjct: 443 AADESTI 449



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 392 LESKRAKVVSCG--ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
           L   R + V  G  A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   + 
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 202

Query: 449 RNIACGWWHTLLLAETTQI 467
            + ACG  HTL L ET  +
Sbjct: 203 VSAACGRNHTLALTETGSV 221


>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 693

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 179/458 (39%), Gaps = 60/458 (13%)

Query: 18  KETVVYMWGY-LPG------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
            +  V+ WGY   G      T+P  +P+  P    +    S       G   +LA    G
Sbjct: 113 TDGTVWAWGYNFYGQLGDGTTTPRLAPVQVPGLTDVVALSS-------GIYHSLALRTDG 165

Query: 71  KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
            +  WG   D     L  G       P  +P    VV  +AG  H ++V   G V+ WG 
Sbjct: 166 TVWAWG---DNASGQLGDGTATRRLSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWAWG- 221

Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
                 +  +   G   +  + S  + S L    A  +D       ++   T  A   + 
Sbjct: 222 ------SNFSGQLGDGTATPRLSPVQVSGLTNVVALSADDSY-TLALRTDGTVWAWGYNS 274

Query: 191 NPASGDEFFT--LSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
               GD   T  LSP  V   PG+  +  ++AG  H+L L   G VW WGY   GQLG G
Sbjct: 275 YGQLGDGTTTPRLSPVQV---PGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNG 331

Query: 248 ---SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGR----------- 288
               R   +P   LI  +  +A       L   G+V     NS G+ G            
Sbjct: 332 IPTQRSPSIPVFGLIDVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIPRPSPVQ 391

Query: 289 ----SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
               + V  ++ G  HS  +   G +  +G    GQ G G+T  +L P     L D  V 
Sbjct: 392 VPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTD--VV 449

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
            ++AG  HT+ +   G V+ +G N  GQLG G       P+L    +L       +S G 
Sbjct: 450 ALSAGGNHTLALRTNGTVWAWGSNSDGQLGDG----TTTPRLSPVQMLGLTNVVALSAGY 505

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            HS  +  DG V +WG N  GQLG G +  R  P  VP
Sbjct: 506 YHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVP 543



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 177/443 (39%), Gaps = 64/443 (14%)

Query: 9   EENEKMEECKETVVYMWGYLP-------GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG 61
           +++  +    +  V+ WGY          T+P  SP+  P    +            G  
Sbjct: 254 DDSYTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPGLTNVV-------ALSAGYS 306

Query: 62  FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
            +LA    G +  WG  +  GQ  L +G   +     P+     VV  +AG++H +++  
Sbjct: 307 HSLALRTDGTVWAWG-YNYNGQ--LGNGIPTQRSPSIPVFGLIDVVALSAGYSHSLALRT 363

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
            G V+ WG+             G   +  + S  +   L T+    S   +    ++   
Sbjct: 364 DGTVWAWGYNSL-------GQLGDGTTIPRPSPVQVPDL-TDVVALSAGDSHSLALRTDG 415

Query: 182 TSSAREESENPASGDEFFT--LSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGY 238
           T  A   + +   GD   T  LSP  V   P +  +  ++AGG HTL L   G VW WG 
Sbjct: 416 TVRAWGVNYSGQLGDGTTTHRLSPVQV---PDLTDVVALSAGGNHTLALRTNGTVWAWGS 472

Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
             +GQLG G+      TP L P                          G + V  ++ G 
Sbjct: 473 NSDGQLGDGTT-----TPRLSPVQ----------------------MLGLTNVVALSAGY 505

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            HS  V   G +  +G    GQ G G+T  +L P     L D  V  ++AG  H++ +  
Sbjct: 506 YHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLTD--VVALSAGDSHSLALRT 563

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           +G V+ +G N   QLG G       P  ++ P L    A  +S G  HS  L  DG V +
Sbjct: 564 DGTVWAWGSNSSSQLGDGTTTPRGSP--VQVPGLTDVVA--LSAGGAHSLALRTDGTVWA 619

Query: 419 WGWNKYGQLGLGDSIDRNIPSLV 441
           WG N YGQLG G +  R  P LV
Sbjct: 620 WGSNYYGQLGDGTTTPRLFPVLV 642



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 162/379 (42%), Gaps = 46/379 (12%)

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           AAG++H +++   G V+ WG          +   G  G       G    +P      + 
Sbjct: 2   AAGYSHSLALHTDGTVWAWG----------SNSSGQLGDGTTTPRGSPVQVPGLTDVVAL 51

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN-PGV-KITKVAAGGRHTLIL 227
                  +  R   +      N +      T +P L ++  PG+  +  ++AG  +TL L
Sbjct: 52  SAGNHHCLALRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLTDVVALSAGSSYTLAL 111

Query: 228 SDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPLLVR-QGSV--- 280
              G VW WGY   GQLG G+   R+  V  P L   +   +SG    L +R  G+V   
Sbjct: 112 RTDGTVWAWGYNFYGQLGDGTTTPRLAPVQVPGLTDVVA-LSSGIYHSLALRTDGTVWAW 170

Query: 281 --NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
             N+SG+ G                + V  ++ GG HS  V   G +  +G    GQ G 
Sbjct: 171 GDNASGQLGDGTATRRLSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWAWGSNFSGQLGD 230

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G+   +L P   S L +  V  ++A   +T+ +  +G V+ +G N +GQLG G       
Sbjct: 231 GTATPRLSPVQVSGLTN--VVALSADDSYTLALRTDGTVWAWGYNSYGQLGDG----TTT 284

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           P+L    +        +S G  HS  L  DG V +WG+N  GQLG G    R+ PS +P+
Sbjct: 285 PRLSPVQVPGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRS-PS-IPV 342

Query: 444 HGFLP-RNIACGWWHTLLL 461
            G +    ++ G+ H+L L
Sbjct: 343 FGLIDVVALSAGYSHSLAL 361



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 111/245 (45%), Gaps = 29/245 (11%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPL 273
           +AAG  H+L L   G VW WG    GQLG G+   R   V  P L   +  +A       
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGLTDVVALSAGNHHCLA 60

Query: 274 LVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGALLTF 313
           L   G+V     NSSG+ G                + V  ++ G  ++  +   G +  +
Sbjct: 61  LRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLTDVVALSAGSSYTLALRTDGTVWAW 120

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G+  YGQ G G+T  +L P     L D  V  +++G++H++ +  +G V+ +G N  GQL
Sbjct: 121 GYNFYGQLGDGTTTPRLAPVQVPGLTD--VVALSSGIYHSLALRTDGTVWAWGDNASGQL 178

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
           G G       P  ++ P L    A  +S G  HS  +  DG V +WG N  GQLG G + 
Sbjct: 179 GDGTATRRLSP--VQVPGLTDVVA--LSAGGYHSLAVRTDGTVWAWGSNFSGQLGDGTAT 234

Query: 434 DRNIP 438
            R  P
Sbjct: 235 PRLSP 239



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 6/149 (4%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           +A G  HS  +   G +  +G    GQ G G+T  +  P     L D  V  ++AG  H 
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGLTD--VVALSAGNHHC 58

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           + +  +G V+ +G N  GQLG G       P+L    +        +S G+ ++  L  D
Sbjct: 59  LALRTDGTVWAWGSNSSGQLGDG----TTTPRLSSVQVPGLTDVVALSAGSSYTLALRTD 114

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
           G V +WG+N YGQLG G +  R  P  VP
Sbjct: 115 GTVWAWGYNFYGQLGDGTTTPRLAPVQVP 143


>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 417

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 40/263 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDR 271
           K+ +++AG  H+  ++  G+++ WG    GQLGLG R   +VP P  +  L+        
Sbjct: 118 KVVQISAGYNHSCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLK-------- 169

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL- 330
                   +N         +K  A G  HS  ++D GA  ++G G+ G+ GHG  +  L 
Sbjct: 170 -------GIN---------IKMAALGSEHSVAISDGGAAFSWGIGVSGRLGHGHESSVLG 213

Query: 331 --------RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
                    P     L  I+V+ +AAGL ++ C    G V+VFG     +L         
Sbjct: 214 FFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVFVFGERGIEKLRLKEMSDAT 273

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV- 441
            P L    I E   +K V+CG  H+ VLT  G++ +WG N+ G LG+G S   ++P  V 
Sbjct: 274 KPSL----ISELPSSKEVACGGYHTCVLTNSGELYTWGSNENGCLGIGSSDVIHLPEKVQ 329

Query: 442 -PIHGFLPRNIACGWWHTLLLAE 463
            P        ++CGW HT  ++E
Sbjct: 330 GPFLKSSVSQVSCGWKHTAAISE 352



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 123/282 (43%), Gaps = 49/282 (17%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV--------P 254
           P  V    G+ I   A G  H++ +SD G  + WG G  G+LG G    ++         
Sbjct: 162 PTKVEYLKGINIKMAALGSEHSVAISDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEY 221

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           TP LI  LE                           VK +A G  +SA   + G +  FG
Sbjct: 222 TPRLIKDLEGIK------------------------VKYVAAGLLNSACTDENGCVFVFG 257

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
                +      +D  +PS  S L     +++A G +HT  ++  G +Y +G N+ G LG
Sbjct: 258 ERGIEKLRLKEMSDATKPSLISELP--SSKEVACGGYHTCVLTNSGELYTWGSNENGCLG 315

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW------------N 422
            G     ++P+ ++ P L+S  ++ VSCG +H+A ++E G+V +WGW            +
Sbjct: 316 IGSSDVIHLPEKVQGPFLKSSVSQ-VSCGWKHTAAISE-GRVFTWGWGGSNGTFSEVGHS 373

Query: 423 KYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAE 463
             GQLG G  +D   P+ V          ++CG+ HT  + E
Sbjct: 374 SSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILE 415



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 306 DAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           DAG      WG   YG+ G G+ + Q +P    +  +  +  IA G  HT+ ++ +G VY
Sbjct: 28  DAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFLTEDGCVY 87

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
             G N FGQLG    +  +V  L      E K+   +S G  HS  +T DG++  WG N 
Sbjct: 88  ATGLNDFGQLGVSESKHYSVEPL--CVFGEEKKVVQISAGYNHSCAITVDGELYMWGKNT 145

Query: 424 YGQLGLGDSIDRNIPSLVPI 443
            GQLGLG    +  P++VP+
Sbjct: 146 SGQLGLG----KRAPNIVPL 161



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 25/195 (12%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG G  G+LGLG+ +     P + P               R  ++N+           IA
Sbjct: 37  WGNGDYGRLGLGN-LDSQWKPVVCPAF-------------RNKTLNA-----------IA 71

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGG H+  +T+ G +   G   +GQ G   +             + +V QI+AG  H+  
Sbjct: 72  CGGAHTLFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCA 131

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           I+V+G +Y++G N  GQLG G      VP   +   L+    K+ + G+ HS  +++ G 
Sbjct: 132 ITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISDGGA 191

Query: 416 VLSWGWNKYGQLGLG 430
             SWG    G+LG G
Sbjct: 192 AFSWGIGVSGRLGHG 206



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 152/379 (40%), Gaps = 57/379 (15%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
           CGG     L  +E G +   G  +D GQ  ++  KH           E  VV+ +AG+ H
Sbjct: 72  CGGA--HTLFLTEDGCVYATG-LNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGYNH 128

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRD-----FGSAGSFQKDSTGKQSALPTEQAPPSDK 170
             ++T  GE+Y WG           R        +   + K    K +AL +E +     
Sbjct: 129 SCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISD 188

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFT----LSPCLVTLNPGVKITKVAAGGRHTLI 226
             G          S R    + +S   FF      +P L+    G+K+  VAAG  ++  
Sbjct: 189 --GGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSAC 246

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
             + G V+ +G  G  +L    R+K +             S   +P L+ +  + SS   
Sbjct: 247 TDENGCVFVFGERGIEKL----RLKEM-------------SDATKPSLISE--LPSS--- 284

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQ 345
                KE+ACGG H+ V+T++G L T+G    G  G GS++    P       +   V Q
Sbjct: 285 -----KEVACGGYHTCVLTNSGELYTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQ 339

Query: 346 IAAGLWHTVCISVEGRVYVF------------GGNQFGQLGTGVDQAENVPKLLETPILE 393
           ++ G  HT  IS EGRV+ +            G +  GQLG G D     P        E
Sbjct: 340 VSCGWKHTAAIS-EGRVFTWGWGGSNGTFSEVGHSSSGQLGHGSDVDYINPT--RVCFGE 396

Query: 394 SKRAKVVSCGARHSAVLTE 412
             +A  VSCG  H+  + E
Sbjct: 397 DVKALQVSCGFNHTGAILE 415



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 11/97 (11%)

Query: 35  KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
           K  ++S +P       S K+V  GG    + T+ SG+L TWGS ++ G   + S      
Sbjct: 274 KPSLISELP-------SSKEVACGGYHTCVLTN-SGELYTWGS-NENGCLGIGSSDVIHL 324

Query: 95  PEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
           PE    P  ++SV + + GW H  +++E G V+TWGW
Sbjct: 325 PEKVQGPFLKSSVSQVSCGWKHTAAISE-GRVFTWGW 360


>gi|169830917|ref|YP_001716899.1| copper amine oxidase domain-containing protein [Candidatus
           Desulforudis audaxviator MP104C]
 gi|169637761|gb|ACA59267.1| copper amine oxidase domain protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 547

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 161/406 (39%), Gaps = 38/406 (9%)

Query: 53  KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
           K     G  F  A    G L TWG      Q     G +   PE        S V     
Sbjct: 45  KTQVSAGSAFTAAVRADGTLWTWG----YDQRVAQLGINALRPEQVGRDINWSAVSGGGD 100

Query: 113 WAHCVS--VTEAGEVYTWGW--RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
               +S  +   G ++TWGW  R  +      R   S    Q    G+     T+ A  S
Sbjct: 101 QIAALSAALKTDGTLWTWGWPLRWDLDRYPGDRPITSKAPMQ---VGRD----TDWAAVS 153

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
              A    +K   T  A   + +   GD   T     V +      T V+AG  HT+ L 
Sbjct: 154 VGGAHFVALKTDGTLWAWGANRHGQLGDGTTTPRNVPVQVGRDTDWTNVSAGASHTVALK 213

Query: 229 DMGQVWGWGYGGEGQLGLGS--RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
             G +W WG+   GQLG+G+    K   +   IP           P    + +    GK 
Sbjct: 214 RNGTLWAWGWNLYGQLGIGTGGDPKAFASHTSIP-----------PTYADEHTPVQVGK- 261

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
            R +V   A  GR +A+ +D G L    WG++G    G    Q+RP       D  V  I
Sbjct: 262 DRDWVAVSAGSGRTAAIKSD-GTLWV--WGMHGIVATGVDRVQVRPLRVGQDTDWAV--I 316

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET----PILESKRAKVVSC 402
           + G  H V +  +G ++ +G N FG+LG G+D     P    T     +   +    VS 
Sbjct: 317 SLGNNHAVAVKTDGTLWAWGVNDFGKLGIGIDPVPGRPNTTGTGWPMQVGRDRDWATVSV 376

Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
           G+ H+A L  DG + +WGWN +GQLG G+ I RN P++V      P
Sbjct: 377 GSNHTAALKADGTLWTWGWNLHGQLGGGNIISRNSPTIVTFAPVAP 422



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 98/243 (40%), Gaps = 42/243 (17%)

Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGE-GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           T+V+AG   T  +   G +W WGY     QLG             I  L     G+D   
Sbjct: 46  TQVSAGSAFTAAVRADGTLWTWGYDQRVAQLG-------------INALRPEQVGRD--- 89

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                 +N S  +G     +IA     SA +   G L T+GW L         +   RP 
Sbjct: 90  ------INWSAVSGGG--DQIAA---LSAALKTDGTLWTWGWPLRWDLDRYPGD---RPI 135

Query: 334 YASSLM----DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            + + M    D     ++ G  H V +  +G ++ +G N+ GQLG G     NVP     
Sbjct: 136 TSKAPMQVGRDTDWAAVSVGGAHFVALKTDGTLWAWGANRHGQLGDGTTTPRNVP----V 191

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
            +        VS GA H+  L  +G + +WGWN YGQLG+G   D   P     H  +P 
Sbjct: 192 QVGRDTDWTNVSAGASHTVALKRNGTLWAWGWNLYGQLGIGTGGD---PKAFASHTSIPP 248

Query: 450 NIA 452
             A
Sbjct: 249 TYA 251



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 116/315 (36%), Gaps = 39/315 (12%)

Query: 33  PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
           P   PI S  P ++     W  V  GG  F +A    G L  WG A+  GQ     G   
Sbjct: 130 PGDRPITSKAPMQVGRDTDWAAVSVGGAHF-VALKTDGTLWAWG-ANRHGQL----GDGT 183

Query: 93  ETPEPFPLPT--EASVVKAAAGWAHCVSVTEAGEVYTWGWREC----VPSAKVTRDFGSA 146
            TP   P+    +      +AG +H V++   G ++ WGW       + +    + F S 
Sbjct: 184 TTPRNVPVQVGRDTDWTNVSAGASHTVALKRNGTLWAWGWNLYGQLGIGTGGDPKAFASH 243

Query: 147 GS----FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
            S    +  + T  Q     +    S        +K   T          A+G +   + 
Sbjct: 244 TSIPPTYADEHTPVQVGKDRDWVAVSAGSGRTAAIKSDGTLWVWGMHGIVATGVDRVQVR 303

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP-TPHLIPC 261
           P  V  +    +  ++ G  H + +   G +W WG    G+LG+G  I  VP  P+    
Sbjct: 304 PLRVGQDTDWAV--ISLGNNHAVAVKTDGTLWAWGVNDFGKLGIG--IDPVPGRPNTTGT 359

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                 G+DR                      ++ G  H+A +   G L T+GW L+GQ 
Sbjct: 360 GWPMQVGRDRDW------------------ATVSVGSNHTAALKADGTLWTWGWNLHGQL 401

Query: 322 GHGSTNDQLRPSYAS 336
           G G+   +  P+  +
Sbjct: 402 GGGNIISRNSPTIVT 416


>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 579

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 167/427 (39%), Gaps = 79/427 (18%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G G A  T+ +G+L        +G +  +S     +P    +P   ++   A G  H ++
Sbjct: 60  GTGLAWGTNSAGRL-------GDGTTTDSS-----SPVSVNVPAGTTITAVAGGAGHSLA 107

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS-DKRAGEEV- 176
           VT AG    WG             FG  G          + +P+   P + D  AG  V 
Sbjct: 108 VTSAGTALAWGDNA----------FGQLG--------DGTTIPSSSTPVAVDVPAGTTVT 149

Query: 177 ------VKRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAG 220
                 V     +SA       A GD F+          + +P  V +  G  IT VAAG
Sbjct: 150 ALSGGGVHNLAVTSAGTAL---AWGDNFWGQLGDGSTTRSRTPVAVNVPAGTTITAVAAG 206

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
             H+L ++  G    WG    GQLG G+      T   IP      +G            
Sbjct: 207 QGHSLAVTSAGTALAWGDNSSGQLGDGTA-----TDSSIPVAADVPAG------------ 249

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
                   + +  +A GG HS  +T  G +L +G    GQ G G+T     P        
Sbjct: 250 --------TTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVPAG 301

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
             V  +AAG  H++ ++  G V  +G N  GQLG G     + P  +  P   +  A  V
Sbjct: 302 TTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITA--V 359

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTL 459
           + G+ HS  +T     L+WG N +GQLG G +    IP  V +  G     IA G +H+L
Sbjct: 360 ATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGSFHSL 419

Query: 460 LLAETTQ 466
            +  +T 
Sbjct: 420 AIVPSTS 426



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 152/388 (39%), Gaps = 55/388 (14%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
           GT+ + S   SP+   +  G +   V GG  G +LA + +G  + WG   D     L  G
Sbjct: 76  GTTTDSS---SPVSVNVPAGTTITAVAGG-AGHSLAVTSAGTALAWG---DNAFGQLGDG 128

Query: 90  K---HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDF 143
                  TP    +P   +V   + G  H ++VT AG    WG   W +           
Sbjct: 129 TTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQL---------- 178

Query: 144 GSAGSFQKDSTGKQSALP--TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
              GS  +  T     +P  T     +  +     V    T+ A  ++ +   GD   T 
Sbjct: 179 -GDGSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTATD 237

Query: 202 S--PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           S  P    +  G  IT VAAGG H+L L+  G V  WG  G GQLG G+           
Sbjct: 238 SSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTS-------- 289

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
                       P+ V          AG + V  +A GGRHS  VT AG +L +G    G
Sbjct: 290 ---------SSTPVAVDV-------PAGTT-VTAVAAGGRHSLAVTSAGDVLAWGDNTAG 332

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           Q G GST     P   +      +  +A G  H++ ++       +G N FGQLG G   
Sbjct: 333 QLGDGSTTHSSTPVAVNVPAGTTITAVATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTT 392

Query: 380 AENVPKLLETPILESKRAKVVSCGARHS 407
           +  +P  ++ P         ++ G+ HS
Sbjct: 393 SSIIPVAVDLP--AGTTVTAIAGGSFHS 418


>gi|7959201|dbj|BAA95994.1| KIAA1470 protein [Homo sapiens]
          Length = 564

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 54/282 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 189 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 245

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 246 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 283

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 284 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 342

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 343 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 402

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAET 464
           +LG  +  D  +P LV +  F  R    I  G+  +  ++E 
Sbjct: 403 RLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEV 444



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 56/307 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 218 RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 277

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 278 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 312

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 313 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 372

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 373 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 432

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLL 460
            G   S  ++E G +  WG     +           P  V  + G+  R++ACG    ++
Sbjct: 433 AGYTCSFAVSEVGGLFFWGATNTSRE------STMYPKAVQDLCGWRIRSLACGKSSIIV 486

Query: 461 LAETTQI 467
            A+ + I
Sbjct: 487 AADESTI 493



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           SC A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   +  + ACG  HTL
Sbjct: 199 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 257

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 258 ALTETGSV 265


>gi|351715554|gb|EHB18473.1| RCC1 domain-containing protein 1 [Heterocephalus glaber]
          Length = 370

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 39/209 (18%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            + +  G  H+ ++  AG + ++G G +GQ GHG+   +  P    +L  + + Q+AAG 
Sbjct: 158 ARRLELGIEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEPEPRPLEALQGLPMSQLAAGG 217

Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-------------TGVDQAEN--------------- 382
           WH+VC+S  G +Y++G N+ GQL              TG D+  N               
Sbjct: 218 WHSVCVSETGDIYIWGWNESGQLALPTRSLAEGKRTDTGEDEGLNEDGSKVERAAEAPAP 277

Query: 383 ------VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
                  P LL+ P+     A  VSCG+RH+AV+T  G++ +WGW KYGQLG  DS   +
Sbjct: 278 FIAIQPFPALLDLPL--GSEAVGVSCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSASLD 335

Query: 437 IPSLVPI---HGFLPRNIACGWWHTLLLA 462
            P  V          + + CG W+T + A
Sbjct: 336 RPCRVEYFVDKQLQVKTVTCGPWNTYVYA 364



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 27/168 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++++AAGG H++ +S+ G ++ WG+   GQL L       PT  L    +   +G+D
Sbjct: 207 GLPMSQLAAGGWHSVCVSETGDIYIWGWNESGQLAL-------PTRSLAEG-KRTDTGED 258

Query: 271 RPLLVRQGSVNSSGKAGRSYVK-----------------EIACGGRHSAVVTDAGALLTF 313
             L      V  + +A   ++                   ++CG RH+AVVT  G L T+
Sbjct: 259 EGLNEDGSKVERAAEAPAPFIAIQPFPALLDLPLGSEAVGVSCGSRHTAVVTRTGELYTW 318

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMD--IQVEQIAAGLWHTVCISVE 359
           GWG YGQ GH  +    RP      +D  +QV+ +  G W+T   +VE
Sbjct: 319 GWGKYGQLGHKDSASLDRPCRVEYFVDKQLQVKTVTCGPWNTYVYAVE 366



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 82/199 (41%), Gaps = 47/199 (23%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGE------TPEPFPLPTEA----SVVK 108
           G   AL    +G++ +WG            G+HG+        EP P P EA     + +
Sbjct: 164 GIEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAEPEPRPLEALQGLPMSQ 212

Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
            AAG  H V V+E G++Y WGW E    A  TR        ++  TG+   L        
Sbjct: 213 LAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSLAEG---KRTDTGEDEGL-------- 261

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP--CLVTLNPGVKITKVAAGGRHTLI 226
                         S     +E PA    F  + P   L+ L  G +   V+ G RHT +
Sbjct: 262 ----------NEDGSKVERAAEAPAP---FIAIQPFPALLDLPLGSEAVGVSCGSRHTAV 308

Query: 227 LSDMGQVWGWGYGGEGQLG 245
           ++  G+++ WG+G  GQLG
Sbjct: 309 VTRTGELYTWGWGKYGQLG 327



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 3/101 (2%)

Query: 330 LRPSYASSLM-DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           L+P    +L  +++  ++  G+ H + +   G+V+ +GG + GQLG G  +AE  P+ LE
Sbjct: 144 LQPPLRRALAPELRARRLELGIEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEPEPRPLE 203

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
              L+      ++ G  HS  ++E G +  WGWN+ GQL L
Sbjct: 204 A--LQGLPMSQLAAGGWHSVCVSETGDIYIWGWNESGQLAL 242



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACG 454
           RA+ +  G  H+ +L   GQV SWG  ++GQLG G       P  L  + G     +A G
Sbjct: 157 RARRLELGIEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEPEPRPLEALQGLPMSQLAAG 216

Query: 455 WWHTLLLAETTQI 467
            WH++ ++ET  I
Sbjct: 217 GWHSVCVSETGDI 229


>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           impatiens]
          Length = 539

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 118/248 (47%), Gaps = 39/248 (15%)

Query: 201 LSPCLVTLNPGVK----ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PT 255
           L+P LV   P V     +  +A GG H+L L++ G+++ WG+   GQ+G G+ +  V P 
Sbjct: 121 LTPTLV---PSVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPI 177

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
           P L+                   +V  +GK     V  I+CG   S  VTD+G + ++G 
Sbjct: 178 PKLL-------------------NVGLNGKK----VVHISCGDSSSVAVTDSGEVYSWGH 214

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
              GQ G G+   Q+ P   ++   I +E++  G  HT+ +S EG +YV+G N +GQLG 
Sbjct: 215 NGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGL 274

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
             D    +P  LE P +      V S     S  ++E  ++  WG        LG SI  
Sbjct: 275 NTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWGQ------CLGQSI-- 326

Query: 436 NIPSLVPI 443
            +P+L P+
Sbjct: 327 KVPTLTPL 334



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 6/178 (3%)

Query: 291 VKEIACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAA 348
           VK  A G G H   +T+ G + ++G+  Y + G+ STN+ L P+   S++D + V  IA 
Sbjct: 81  VKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVPSVLDDKFVVDIAC 140

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTG--VDQAENVPKLLETPILESKRAKVVSCGARH 406
           G  H++ ++ +G +Y +G N  GQ+G G  +   + +PKLL    L  K+   +SCG   
Sbjct: 141 GGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVG-LNGKKVVHISCGDSS 199

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG-FLPRNIACGWWHTLLLAE 463
           S  +T+ G+V SWG N  GQLGLG+   +  P  V      +   + CG+ HTL L++
Sbjct: 200 SVAVTDSGEVYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSD 257



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 128/277 (46%), Gaps = 37/277 (13%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +GD   T+ P  +    G  +   A G G H L L++ G+V+ WGY    +LG  S  + 
Sbjct: 61  TGDTQSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNKSTNEG 120

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
           + TP L+P +                           +V +IACGG HS  +T+ G +  
Sbjct: 121 L-TPTLVPSV-----------------------LDDKFVVDIACGGHHSLALTNKGEIYA 156

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDI-----QVEQIAAGLWHTVCISVEGRVYVFGG 367
           +G  + GQ G G+    ++P     L+++     +V  I+ G   +V ++  G VY +G 
Sbjct: 157 WGHNVSGQVGCGTILSTVQP--IPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWGH 214

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG G   ++  P+ + T        + V CG  H+  L+++G +  WG N YGQL
Sbjct: 215 NGVGQLGLGNCTSQVEPQKVAT--FAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQL 272

Query: 428 GLGDSIDRNIPSL--VPIHGFLPRNIACGWWHTLLLA 462
           GL    +  IP+   VP  G +  +I    +H + LA
Sbjct: 273 GLNTDSNVWIPTKLEVPEMGRI-LDIVTSHYHHISLA 308



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 145/392 (36%), Gaps = 99/392 (25%)

Query: 8   REENEKMEECKETVVY-----MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
           +  NE +   K+ +VY      +G L GT   +S I       LCG  S K    G    
Sbjct: 34  KAANETLLVTKDDMVYGIGNNTYGCL-GTGDTQSTIYPKKIEALCG-KSVKTFAYGKGPH 91

Query: 63  ALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSV 119
            LA +E GK+ +WG  D  + G     S   G TP   P +  +  VV  A G  H +++
Sbjct: 92  VLALTEEGKVYSWGYNDYCELGNK---STNEGLTPTLVPSVLDDKFVVDIACGGHHSLAL 148

Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
           T  GE+Y WG      S +V               G  + L T Q  P     G      
Sbjct: 149 TNKGEIYAWGHN---VSGQV---------------GCGTILSTVQPIPKLLNVG------ 184

Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
                                       LN G K+  ++ G   ++ ++D G+V+ WG+ 
Sbjct: 185 ----------------------------LN-GKKVVHISCGDSSSVAVTDSGEVYSWGHN 215

Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
           G GQLGLG+            C       K                  +  ++++ CG  
Sbjct: 216 GVGQLGLGN------------CTSQVEPQK-------------VATFAKIVIEKVVCGYM 250

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           H+  ++D G L  +G   YGQ G  + ++   P+        ++  I    +H + +++ 
Sbjct: 251 HTLALSDEGVLYVWGANSYGQLGLNTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMS 310

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
                  GN+    G  + Q+  VP L  TP+
Sbjct: 311 ------EGNRIFMWGQCLGQSIKVPTL--TPL 334



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 6/163 (3%)

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVC 355
               + +VT    +   G   YG  G G T   + P    +L    V+  A G   H + 
Sbjct: 35  AANETLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYPKKIEALCGKSVKTFAYGKGPHVLA 94

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++ EG+VY +G N + +LG         P L+ + +L+ K    ++CG  HS  LT  G+
Sbjct: 95  LTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVPS-VLDDKFVVDIACGGHHSLALTNKGE 153

Query: 416 VLSWGWNKYGQLGLGD--SIDRNIPSL--VPIHGFLPRNIACG 454
           + +WG N  GQ+G G   S  + IP L  V ++G    +I+CG
Sbjct: 154 IYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVHISCG 196



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 7/154 (4%)

Query: 317 LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           +Y    + S    L P + S++    V   AA    T+ ++ +  VY  G N +G LGTG
Sbjct: 5   MYHDLKNWSIFSLLEPKFISNVRMAIVYGKAAN--ETLLVTKDDMVYGIGNNTYGCLGTG 62

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
             Q+   PK +E   L  K  K  + G   H   LTE+G+V SWG+N Y +LG   + + 
Sbjct: 63  DTQSTIYPKKIEA--LCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNKSTNEG 120

Query: 436 NIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
             P+LVP  +      +IACG  H+L L    +I
Sbjct: 121 LTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEI 154


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 140/317 (44%), Gaps = 58/317 (18%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VP 254
           +  ++L P L+     + +  VA GG H  I++  G+V+ WG G  G+  LG RI M + 
Sbjct: 288 NSIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGR--LGQRIDMDIS 345

Query: 255 TPHLIPCLE------------HAAS----------GKDR-PLLVRQGSVNSSGKAGRS-- 289
           +P ++  L             H  +          GKD    LV +G + S     +   
Sbjct: 346 SPKIVDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSL 405

Query: 290 -----YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                 +  IACG  H+A+V+  G L T+G G +G  GHG+ +    P    SL  + V 
Sbjct: 406 PVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVR 465

Query: 345 QIAAGLWHTVCI-----------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI-- 391
            +A G WHT  I           +  G+++ +G    G+LG     A+NV KL+ T +  
Sbjct: 466 SVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLG----HADNVNKLVPTCVSQ 521

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
           L       VSCG   +  LT  G+V + G  KYGQLG     DR     V + G L +  
Sbjct: 522 LVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDR----AVVVEGMLKQEY 577

Query: 451 ---IACGWWHTLLLAET 464
              I+CG +H  +L  +
Sbjct: 578 VKMISCGSYHVAVLTSS 594



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 147/359 (40%), Gaps = 93/359 (25%)

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
           +P+     ++  V K A G  H  ++T++G+VYTWG   C        D    G  +   
Sbjct: 346 SPKIVDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDSC-------SDLVDEGRIRSQW 398

Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
              + +LP E                                               G+ 
Sbjct: 399 LTHKFSLPVE-----------------------------------------------GIS 411

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I+ +A G  HT I+S  G+++ +G G  G LG G+      +P  +  L+          
Sbjct: 412 ISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGN-YHSFSSPKEVESLKGLC------- 463

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVV-----------TDAGALLTFGWGLYGQCG 322
                            V+ +ACG  H+A +           T  G L T+G    G+ G
Sbjct: 464 -----------------VRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLG 506

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
           H    ++L P+  S L+D    Q++ G   T+ ++  G+V+  G  ++GQLG      ++
Sbjct: 507 HADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGN--PHVKD 564

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              ++E  +L+ +  K++SCG+ H AVLT  G V +WG  + G+LGLGD+ +R  P  V
Sbjct: 565 RAVVVE-GMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFV 622



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 3/177 (1%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ +A GG H+A+VT  G +  +G G  G+ G     D   P    SL DI+V+++A G 
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVACGE 365

Query: 351 WHTVCISVEGRVYVFGGNQFGQL-GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
           +HT  ++  G VY +G +    L   G  +++ +      P+ E      ++CG  H+A+
Sbjct: 366 YHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPV-EGISISSIACGEWHTAI 424

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
           ++  G++ ++G   +G LG G+    + P  V  + G   R++ACG WHT  + E +
Sbjct: 425 VSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEVS 481


>gi|47085959|ref|NP_998341.1| protein RCC2 homolog [Danio rerio]
 gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=Protein RCC2 homolog
 gi|42744570|gb|AAH66628.1| Zgc:77115 [Danio rerio]
          Length = 495

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 52/279 (18%)

Query: 212 VKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           V+++ V +G    H+LI++  G++W WG   +GQLG G   K +  P LI  L       
Sbjct: 121 VQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGD-TKRLEAPKLIEGL------- 172

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                            G   +   ACG  H+  +T+ G + TFG    GQ G G+  D 
Sbjct: 173 -----------------GEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDA 215

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD----------- 378
           +            + ++A G   ++ +  +G +Y FG  ++GQLG   D           
Sbjct: 216 VLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIE 275

Query: 379 -QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYGQL 427
              E +P+ +   I ++K  +V          V+CGA H+ VL    +V SWG+  YG+L
Sbjct: 276 FDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRL 335

Query: 428 GLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAE 463
           G  +  D  +P LV +  F  R    I CG+  +  L+E
Sbjct: 336 GHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSE 374



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 118/270 (43%), Gaps = 19/270 (7%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            LSP  +  N G  I KVA G   ++I+   G ++ +G    GQLG  S  K +     I
Sbjct: 216 VLSPATIQYN-GQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRI 274

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
              +     +   + + +              +++ACG  H+ V+     + ++G+G YG
Sbjct: 275 E-FDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYG 333

Query: 320 QCGHGSTNDQLRPSYASSLMDIQ---VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           + GH    D++ P     L D       QI  G   +  +S  G ++ +G     +    
Sbjct: 334 RLGHAEQKDEMVPRLV-KLFDFPGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSR---- 388

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN-KYGQLGLGDSIDR 435
             ++   PK ++   L   + + ++CG + S ++  D   +SWG +  +G+LG GD+  +
Sbjct: 389 --ESTMYPKAVQD--LCGWKIRSLACG-KSSIIVAADDSTISWGPSPTFGELGYGDNKPK 443

Query: 436 NIPS---LVPIHGFLPRNIACGWWHTLLLA 462
           +  +   +  + G     +  G+ H+L++A
Sbjct: 444 SSTTAQEVKTLDGVYSEQVVMGYSHSLVIA 473


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 28/259 (10%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  ++      +T+V+ G  H+L L++ GQ++ WG    GQLG    +   P P +I  +
Sbjct: 80  PQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSI 139

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                       V +I+CG  H   +T++G L  +G   YGQ G
Sbjct: 140 ------------------------ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLG 175

Query: 323 HGSTNDQL-RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G+T  ++   +   SL  I +  IA G  H+  +S  G ++ +G N FGQLG     + 
Sbjct: 176 LGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSR 235

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
             P  L+T  L S   + +SCG   S  LT++G V + G   +GQLG G   +  +P +V
Sbjct: 236 CYPTQLKT--LRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMV 293

Query: 442 -PIHGFLPRNIACGWWHTL 459
             + G     IACG  HTL
Sbjct: 294 FELMGSKITQIACGRKHTL 312



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 103/182 (56%), Gaps = 8/182 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAG 349
           V++ ACGG H+ ++T  G L T G   +GQ GH + N    RP + S+L +  V Q++ G
Sbjct: 38  VQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCG 97

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSA 408
           L H++ ++  G+++ +G N  GQLG  +D      P+++++  + +K    +SCG  H  
Sbjct: 98  LSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKS--IATKTVVQISCGHSHCL 155

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH---GFLPRNIACGWWHTLLLAETT 465
            LT  G++ +WG N+YGQLGLG +  + +P+   +    G     IACG  H+  ++++ 
Sbjct: 156 ALTNSGELFAWGANEYGQLGLG-TTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSG 214

Query: 466 QI 467
            I
Sbjct: 215 AI 216



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 35/233 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +++ G  H L L++ G+++ WG    GQLGLG+  K VPT  L+  L           
Sbjct: 144 VVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSL----------- 192

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLR 331
                       AG   +  IACGG HS  V+ +GA+  FGWG   +GQ G    + +  
Sbjct: 193 ------------AGIP-IAFIACGGNHSFAVSKSGAI--FGWGKNTFGQLGLNDLDSRCY 237

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P+   +L  + V  I+ G   +V ++ EG V+  G   FGQLG G    E +P++    +
Sbjct: 238 PTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRM----V 293

Query: 392 LESKRAKV--VSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            E   +K+  ++CG +H+ A +   G+V  +G    GQLG+G S+  N P +V
Sbjct: 294 FELMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIV 346



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 122/312 (39%), Gaps = 93/312 (29%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP------TEASVVKAAAG 112
           G   +LA +  G+L +WGS +  GQ       H      +P P         +VV+ + G
Sbjct: 97  GLSHSLALTNWGQLFSWGS-NATGQL-----GHDLDMVSYPAPRMIKSIATKTVVQISCG 150

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
            +HC+++T +GE++ WG  E          +G  G     +TGK+  +PT          
Sbjct: 151 HSHCLALTNSGELFAWGANE----------YGQLG---LGTTGKK--VPT---------- 185

Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
                                           LV    G+ I  +A GG H+  +S  G 
Sbjct: 186 ------------------------------ATLVKSLAGIPIAFIACGGNHSFAVSKSGA 215

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           ++GWG    GQLGL                        R    +  ++ S G      V+
Sbjct: 216 IFGWGKNTFGQLGLNDL-------------------DSRCYPTQLKTLRSLG------VR 250

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            I+CG   S  +T  G + T G G +GQ GHG+  +++ P     LM  ++ QIA G  H
Sbjct: 251 YISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKH 310

Query: 353 TVC-ISVEGRVY 363
           T+  +   G+VY
Sbjct: 311 TLAFVPSRGKVY 322



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 8/105 (7%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           +Y +G    G+LG G  + E V    E    ++   +  +CG  H+ +LT+DG++ + G 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 422 NKYGQLGLGDSIDRNIPSLVP-----IHGFLPRNIACGWWHTLLL 461
           N +GQLG   +   N+P+  P     +  ++   ++CG  H+L L
Sbjct: 63  NDHGQLGHDTN---NLPNKRPQFISALENYIVTQVSCGLSHSLAL 104


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 117/254 (46%), Gaps = 32/254 (12%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L              
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK---------- 129

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYA 335
                         + +++CG  HS  ++    + ++G   +GQ G G     Q  P   
Sbjct: 130 --------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---- 391
            SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NVP     P+    
Sbjct: 176 RSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALS---GRNVPAQSNKPLSIGA 232

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
           L++     +SCG  H+AVLT+DG+V ++G N  GQLG   + ++  P LV     L   I
Sbjct: 233 LKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGLVSQI 292

Query: 452 ACGWWHTLLLAETT 465
            CG +HTL    TT
Sbjct: 293 DCGSYHTLAYVHTT 306



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 103/230 (44%), Gaps = 41/230 (17%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + +P  +T   G+KI +V+ G  H+L LS   QV+ WG    GQLGLG       +P  +
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--- 316
             LE        PL                   ++A GG HS  ++  G   +FGWG   
Sbjct: 176 RSLEGI------PL------------------AQVAAGGTHSFALSLCGT--SFGWGSNS 209

Query: 317 -----LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
                L G+     +N   +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N  G
Sbjct: 210 AGQLALSGRNVPAQSN---KPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSG 266

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
           QLG      +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 267 QLGYSPTPEKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG    Q   +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLIVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      +  ++G     ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 28/251 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   T+ P  +    G KI  ++ G G H ++ +  G+V+ WG+    QLG G+    +
Sbjct: 57  GDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGL 116

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
              H+                    S N S K     V E+ACG  HS V+T  G +  +
Sbjct: 117 VPYHI--------------------STNLSNKQ----VIEVACGSYHSLVLTSDGEVFAW 152

Query: 314 GWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G GST +Q  P   +  L +  V  IA G   ++ +   G V+V+G N  GQ
Sbjct: 153 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQ 212

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G   + N P       L+  R + V+CG  H+ VLT++GQV +WG N YGQLG G+ 
Sbjct: 213 LGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 433 IDRNIPSLVPI 443
            +++ P+ V +
Sbjct: 271 SNQSYPTPVVV 281



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
           K+IAC     G H  + T  G + T+G   Y Q G+G+TN  L P + S+ L + QV ++
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEV 133

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
           A G +H++ ++ +G V+ +G N  GQ+G+G    + +P+ + T  L++K    ++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVVNIACGQMC 192

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
           S  +   G+V  WG+N  GQLGLG S ++  P  V  + G   + +ACG+ HTL+L +  
Sbjct: 193 SMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 252

Query: 466 QI 467
           Q+
Sbjct: 253 QV 254



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 33/212 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP-CLEHAASGKDR 271
           ++ +VA G  H+L+L+  G+V+ WGY   GQ+G GS     P P  +  CL++       
Sbjct: 129 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRVTGCLQNKV----- 182

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                              V  IACG   S  V + G +  +G+   GQ G GS+ +Q  
Sbjct: 183 -------------------VVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPT 223

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P   ++L  I+V+++A G  HT+ ++ EG+VY +G N +GQLGTG    ++ P    TP+
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP----TPV 279

Query: 392 LESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
           +  K    ++ +C + H SA  T+ G V  WG
Sbjct: 280 VVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 42/238 (17%)

Query: 43  PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           P RL      K  C   G G    LAT+E G++ TWG       S L +G       P+ 
Sbjct: 65  PRRLDSLTGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNAGLVPYH 120

Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           + T  S   V++ A G  H + +T  GEV+ WG             + ++G     ST  
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 167

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
           Q  +P         +    +   +  S A   +                 +SG++    +
Sbjct: 168 Q-PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQ---PT 223

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
           PC V    G+++ +VA G  HTL+L+D GQV+ WG    GQLG G++     PTP ++
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 281



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 22  VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
           V+ WGY   G     S    PIP R+ G    K V    CG   ++A   +G++  WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGY- 207

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
              G   L  G  G  P P  +       V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258


>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
 gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Danio rerio]
 gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
          Length = 531

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 112/223 (50%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           +SP LV+ N  G ++T+V+ G  H+L L+  G+V+ WGY   GQ+G GS     PTP  +
Sbjct: 116 VSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQ-PTPRKV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++                          +  IACG   S  VTD G +  +G+   
Sbjct: 175 SNCLQNKV------------------------IVNIACGQTSSMAVTDNGEVYGWGYNGN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G+  +QL P    +L    V QIA+G  H++ ++ EG +Y +G N +GQLGTG  
Sbjct: 211 GQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNK 270

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             +  P  + T   + +  ++ +C + H SA  T+ GQV  WG
Sbjct: 271 SNQLSPVQVMTE--KERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 28/250 (11%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +GD   T++P  +    G K+  ++ G G H L++++ G+++ WG+ G  QLG G+  + 
Sbjct: 56  TGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQG 115

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
           V                  P+LV   S N  GK     V E++CG  HS  +T  G +  
Sbjct: 116 VS-----------------PILV---STNLQGKR----VTEVSCGSHHSLALTHEGEVFA 151

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   S+ L +  +  IA G   ++ ++  G VY +G N  G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNG 211

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G +  +  P  L    L+      ++ G  HS  LT++G + +WG N YGQLG G+
Sbjct: 212 QLGLGNNGNQLTPCRL--IALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGN 269

Query: 432 SIDRNIPSLV 441
             ++  P  V
Sbjct: 270 KSNQLSPVQV 279



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 97/168 (57%), Gaps = 3/168 (1%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
           G H  +VT+ G L  +G   Y Q G+G+TN  + P   S+ L   +V +++ G  H++ +
Sbjct: 84  GPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLAL 143

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
           + EG V+ +G N  GQ+G+G    +  P+ + +  L++K    ++CG   S  +T++G+V
Sbjct: 144 THEGEVFAWGYNNCGQVGSGSTANQPTPRKV-SNCLQNKVIVNIACGQTSSMAVTDNGEV 202

Query: 417 LSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAE 463
             WG+N  GQLGLG++ ++  P  L+ + GF    IA G+ H+L L +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTD 250



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 136/364 (37%), Gaps = 92/364 (25%)

Query: 11  NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
           NE +    +  VY+ G       GT   +S I +P       G     +  G     L  
Sbjct: 32  NEAIYITHDDEVYVLGLNCSNCLGTGDSQSTI-APKKLDCLSGKKLISLSYGSGPHVLLV 90

Query: 67  SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSVTEAG 123
           +E G+L  WG     G S L +G   +   P  + T      V + + G  H +++T  G
Sbjct: 91  TEDGELYAWGH---NGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEG 147

Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
           EV+ WG+  C          G  GS      G  +  PT                 RK S
Sbjct: 148 EVFAWGYNNC----------GQVGS------GSTANQPTP----------------RKVS 175

Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
           +  +                          I  +A G   ++ ++D G+V+GWGY G GQ
Sbjct: 176 NCLQNK-----------------------VIVNIACGQTSSMAVTDNGEVYGWGYNGNGQ 212

Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
           LGLG+         L PC           L+  QG            V +IA G  HS  
Sbjct: 213 LGLGNN-----GNQLTPC----------RLIALQGFC----------VLQIASGYAHSLA 247

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE-GRV 362
           +TD G L  +G   YGQ G G+ ++QL P    +  +  VE  A    HT     + G+V
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEKERIVEIAACHSTHTSAAKTQSGQV 307

Query: 363 YVFG 366
           Y++G
Sbjct: 308 YMWG 311



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTE 412
           + I+ +  VYV G N    LGTG  Q+   PK L+   L  K+   +S G+  H  ++TE
Sbjct: 35  IYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDC--LSGKKLISLSYGSGPHVLLVTE 92

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
           DG++ +WG N Y QLG G +     P LV   + G     ++CG  H+L L    ++
Sbjct: 93  DGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEV 149


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 121/250 (48%), Gaps = 26/250 (10%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
           G+H + L+  G+V+ WG G  G+LG G                   + ++ P LVR    
Sbjct: 248 GKHYMALTSEGEVYSWGNGDGGRLGHGD-----------------TNSREEPTLVR---- 286

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
             SGK    +V  I CG  +SA +T  G L T+G G YG+ GHGS+ DQL P+   SL  
Sbjct: 287 GLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKG 346

Query: 341 IQVEQI--AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
            +V  I   +G   T+ ++ +G V+ +G   +G+LG G       PK+++   L+ +   
Sbjct: 347 RRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDR--LQGQDIV 404

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWH 457
            V CGA+ S  LT+ G + +WG     +LG G       P  L  + G    ++A G  H
Sbjct: 405 RVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMH 464

Query: 458 TLLLAETTQI 467
            L++ E  ++
Sbjct: 465 CLVMTEEGEV 474



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 125/320 (39%), Gaps = 64/320 (20%)

Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
           H +++T  GEVY+WG              G  G      T  +   PT     S K+ G 
Sbjct: 250 HYMALTSEGEVYSWG-------------NGDGGRLGHGDTNSREE-PTLVRGLSGKQLGR 295

Query: 175 EVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLNPGVKITKV 217
            VV     S+    S    +  E FT                 L+P LV    G ++  +
Sbjct: 296 HVVHIVCGSTY---SAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDI 352

Query: 218 --AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
              +G   TL ++D G VW WG G  G+LG G       TP +I  L+    G+D   +V
Sbjct: 353 CCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGS-DGCKTPKIIDRLQ----GQD---IV 404

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
           R                 + CG + S  +T  G + T+G G   + GHG+      P   
Sbjct: 405 R-----------------VCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQL 447

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
             L   +V  +A G  H + ++ EG VY +G N  GQLG      ++ P L+    L+ K
Sbjct: 448 EGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLMP---LDGK 504

Query: 396 RAKVVSCGARHSAVLTEDGQ 415
               ++CG   S   T  G 
Sbjct: 505 SISGIACGPAQSFCWTSTGH 524



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 42  IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
           I  RL G D  +  CG    F+LA +++G + TWG  D +   + T  +H   P+     
Sbjct: 394 IIDRLQGQDIVRVCCG--AQFSLALTKTGHIWTWGKGDSQRLGHGTE-EHIRFPKQLEGL 450

Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
               VV  A G  HC+ +TE GEVY WG
Sbjct: 451 RGKKVVDVAVGSMHCLVMTEEGEVYGWG 478



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 110/290 (37%), Gaps = 58/290 (20%)

Query: 9   EENEKMEECKETVVYMWGYLPG--------TSPEKSPILSPIPARLCGGDSWKDVCGGGC 60
           E    M    E  VY WG   G         S E+  ++  +  +  G      VCG   
Sbjct: 247 EGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCG--S 304

Query: 61  GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--------AAG 112
            ++ A +  G+L TWG  +     Y   G HG + +    PT    +K          +G
Sbjct: 305 TYSAAITADGELFTWGRGN-----YGRLG-HGSSEDQLT-PTLVVSLKGRRVIDICCGSG 357

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
            A  ++VT+ G V++WG            D+G  G    D       +        D+  
Sbjct: 358 DAQTLAVTDDGTVWSWG----------DGDYGKLGRGGSDGCKTPKII--------DRLQ 399

Query: 173 GEEVVK----------RRKTSS----AREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
           G+++V+            KT       + +S+    G E     P  +    G K+  VA
Sbjct: 400 GQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVA 459

Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
            G  H L++++ G+V+GWG   +GQLG  S       P L+P    + SG
Sbjct: 460 VGSMHCLVMTEEGEVYGWGRNDQGQLG-DSSFSTKSDPTLMPLDGKSISG 508


>gi|301112376|ref|XP_002905267.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262095597|gb|EEY53649.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 233

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 92/191 (48%), Gaps = 30/191 (15%)

Query: 187 EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
             S   A+  +    +P +V     V+I  VAAGG H+L +   G+VW WG    GQLG+
Sbjct: 66  NSSGQVAAASKEMVQTPTIVEFPKAVEIVAVAAGGMHSLAVDSCGRVWAWGCNTYGQLGI 125

Query: 247 GSRIKMVPTPHLI--PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
           G  +  + TP L+  P   HA                          + IA G  HSAV+
Sbjct: 126 GCEMDKLHTPSLVALPADVHA--------------------------QRIAAGWAHSAVI 159

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL--MDIQVEQIAAGLWHTVCISVEGRV 362
             +G + TFGWGLY Q GH +T  +L+P    +L  +D  + Q+A G WHT  ++  G +
Sbjct: 160 LTSGEIFTFGWGLYNQLGHSTTQSELQPVIVDALQGLDSNIVQVACGNWHTAALTESGDL 219

Query: 363 YVFGGNQFGQL 373
           Y +G  + GQL
Sbjct: 220 YTWGWGKDGQL 230



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 106/234 (45%), Gaps = 36/234 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G + FT+  C            VA G  H L+L+D G+V  WG+   GQ+   S+ +MV 
Sbjct: 32  GGDTFTIGRC----------KAVACGSNHALVLTDSGRVVAWGWNSSGQVAAASK-EMVQ 80

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           TP ++          + P  V               +  +A GG HS  V   G +  +G
Sbjct: 81  TPTIV----------EFPKAVE--------------IVAVAAGGMHSLAVDSCGRVWAWG 116

Query: 315 WGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
              YGQ G G   D+L  PS  +   D+  ++IAAG  H+  I   G ++ FG   + QL
Sbjct: 117 CNTYGQLGIGCEMDKLHTPSLVALPADVHAQRIAAGWAHSAVILTSGEIFTFGWGLYNQL 176

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           G    Q+E  P +++           V+CG  H+A LTE G + +WGW K GQL
Sbjct: 177 GHSTTQSELQPVIVDALQGLDSNIVQVACGNWHTAALTESGDLYTWGWGKDGQL 230



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           K +ACG  H+ V+TD+G ++ +GW   GQ    S      P+       +++  +AAG  
Sbjct: 42  KAVACGSNHALVLTDSGRVVAWGWNSSGQVAAASKEMVQTPTIVEFPKAVEIVAVAAGGM 101

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVL 410
           H++ +   GRV+ +G N +GQLG G +  + + P L+  P      A+ ++ G  HSAV+
Sbjct: 102 HSLAVDSCGRVWAWGCNTYGQLGIGCEMDKLHTPSLVALP--ADVHAQRIAAGWAHSAVI 159

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLLLAET 464
              G++ ++GW  Y QLG   +     P +V     L  NI   ACG WHT  L E+
Sbjct: 160 LTSGEIFTFGWGLYNQLGHSTTQSELQPVIVDALQGLDSNIVQVACGNWHTAALTES 216



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 79/205 (38%), Gaps = 40/205 (19%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   AL  ++SG+++ WG  +  GQ    S +  +TP     P    +V  AAG  H ++
Sbjct: 47  GSNHALVLTDSGRVVAWG-WNSSGQVAAASKEMVQTPTIVEFPKAVEIVAVAAGGMHSLA 105

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           V   G V+ WG              G      K  T    ALP +             V 
Sbjct: 106 VDSCGRVWAWG-------CNTYGQLGIGCEMDKLHTPSLVALPAD-------------VH 145

Query: 179 RRKTSSAREESENPASGDEFFT-----------------LSPCLVTLNPGV--KITKVAA 219
            ++ ++    S    +  E FT                 L P +V    G+   I +VA 
Sbjct: 146 AQRIAAGWAHSAVILTSGEIFTFGWGLYNQLGHSTTQSELQPVIVDALQGLDSNIVQVAC 205

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQL 244
           G  HT  L++ G ++ WG+G +GQL
Sbjct: 206 GNWHTAALTESGDLYTWGWGKDGQL 230



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 29/46 (63%)

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           R K V+CG+ H+ VLT+ G+V++WGWN  GQ+          P++V
Sbjct: 40  RCKAVACGSNHALVLTDSGRVVAWGWNSSGQVAAASKEMVQTPTIV 85


>gi|344283459|ref|XP_003413489.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Loxodonta
           africana]
          Length = 523

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 54/282 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 148 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPKLIEGLSH---- 202

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 203 --------------------EVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 242

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 243 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 301

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 302 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 361

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAET 464
           +LG  +  D  +P LV +  F  R    I  G+  +  ++E 
Sbjct: 362 RLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEV 403



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 56/307 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 177 RNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 236

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 237 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 271

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 272 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 331

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 332 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 391

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLL 460
            G   S  ++E G +  WG     +           P  V  + G+  R++ACG    ++
Sbjct: 392 AGYTCSFAVSEVGGLFFWGATNTSREST------MYPKAVQDLCGWKIRSLACGKSSIIV 445

Query: 461 LAETTQI 467
            A+ + I
Sbjct: 446 AADESTI 452



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 91/420 (21%), Positives = 166/420 (39%), Gaps = 78/420 (18%)

Query: 53  KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           + V  G C   +L  +  GKL +WG  +++GQ      K  E P+     +   +V AA 
Sbjct: 152 RTVVSGSCAAHSLLITTEGKLWSWGR-NEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAAC 210

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS-ALPTEQAPPSDK 170
           G  H +++TE G V+ +G              G  G       G Q+ A+P+   P    
Sbjct: 211 GRNHTLALTETGSVFAFG----------ENKMGQLG------LGNQTDAVPS---PAQIM 251

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
             G+ + K              A G EF                         ++I+   
Sbjct: 252 YNGQPITKM-------------ACGAEF-------------------------SMIMDCK 273

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G ++ +G    GQLG  S  K +     I   +     +   + + +             
Sbjct: 274 GNLYSFGCPEYGQLGHNSDGKFIARAQRIE-YDCELVPRRVAIFIEKTKDGQILPVPNVV 332

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIA 347
           V+++ACG  H+ V+     + ++G+G YG+ GH    D++ P     L D       QI 
Sbjct: 333 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGASQIY 391

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
           AG   +  +S  G ++ +G     +      ++   PK ++   L   + + ++CG + S
Sbjct: 392 AGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQD--LCGWKIRSLACG-KSS 442

Query: 408 AVLTEDGQVLSWGWN-KYGQLGLGDSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLAE 463
            ++  D   +SWG +  +G+LG GD   ++  +   +  + G     +A G+ H+L++A 
Sbjct: 443 IIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSLVIAR 502



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           SC A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   +  + ACG  HTL
Sbjct: 158 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTL 216

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 217 ALTETGSV 224


>gi|29789090|ref|NP_061185.1| protein RCC2 [Homo sapiens]
 gi|209969703|ref|NP_001129676.1| protein RCC2 [Homo sapiens]
 gi|71152033|sp|Q9P258.2|RCC2_HUMAN RecName: Full=Protein RCC2; AltName: Full=RCC1-like protein TD-60;
           AltName: Full=Telophase disk protein of 60 kDa
 gi|27526613|emb|CAD13148.1| RCC1-like protein [Homo sapiens]
 gi|31753208|gb|AAH53908.1| RCC2 protein [Homo sapiens]
 gi|55250899|gb|AAH42141.1| Regulator of chromosome condensation 2 [Homo sapiens]
 gi|119615244|gb|EAW94838.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
           sapiens]
 gi|119615245|gb|EAW94839.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
           sapiens]
 gi|168270564|dbj|BAG10075.1| regulator of chromosome condensation 2 [synthetic construct]
 gi|410215858|gb|JAA05148.1| regulator of chromosome condensation 2 [Pan troglodytes]
 gi|410262104|gb|JAA19018.1| regulator of chromosome condensation 2 [Pan troglodytes]
 gi|410298210|gb|JAA27705.1| regulator of chromosome condensation 2 [Pan troglodytes]
 gi|410341591|gb|JAA39742.1| regulator of chromosome condensation 2 [Pan troglodytes]
          Length = 522

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 54/282 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 147 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 203

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 204 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 241

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 242 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 300

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 301 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 360

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAET 464
           +LG  +  D  +P LV +  F  R    I  G+  +  ++E 
Sbjct: 361 RLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEV 402



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 56/307 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 176 RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 235

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 236 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 270

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 271 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 330

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 331 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 390

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLL 460
            G   S  ++E G +  WG     +           P  V  + G+  R++ACG    ++
Sbjct: 391 AGYTCSFAVSEVGGLFFWGATNTSREST------MYPKAVQDLCGWRIRSLACGKSSIIV 444

Query: 461 LAETTQI 467
            A+ + I
Sbjct: 445 AADESTI 451



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           SC A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   +  + ACG  HTL
Sbjct: 157 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 215

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 216 ALTETGSV 223


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 124/259 (47%), Gaps = 30/259 (11%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            V+   V +GG+H + LS  G V+ WG G +G+LG G+R                 +  DR
Sbjct: 3441 VRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNR-----------------NSCDR 3483

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P ++   ++   G      V +I+CGG HSA +T    L T+G G YG+ GHG + DQL 
Sbjct: 3484 PRVIE--ALRGKG------VIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLL 3535

Query: 332  PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P    +L   +V  +A  +G   T+C++ +  V+ +G   +G+LG G      +P  +E+
Sbjct: 3536 PKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVES 3595

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIHGFLP 448
             I        V CG++ S  LT  G V +WG   Y +LG G D   R    +  + G   
Sbjct: 3596 LI--GLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKV 3653

Query: 449  RNIACGWWHTLLLAETTQI 467
              IA G  H +   +T ++
Sbjct: 3654 ITIATGSLHCVASTDTGEV 3672



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 121/250 (48%), Gaps = 30/250 (12%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
           G+H L L+  G+V+ WG G  G+LG G                   S ++ P LV     
Sbjct: 26  GKHFLALTREGEVYSWGSGDGGKLGHGD-----------------TSPREEPTLV----- 63

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
             +G AG+  ++ I+CG  HSA VT  G L T+G G YG+ GHGS+ DQL P   S L  
Sbjct: 64  --TGLAGKQVIR-ISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRG 120

Query: 341 IQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
             +  +A  +G  HT+  + +G V+ +G   +G+LG G       PK +E   L+     
Sbjct: 121 HHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIER--LQGLGVC 178

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWH 457
            V CGA+ S  LT DG V +WG  +  +LG G       P LV  + G    +++ G  H
Sbjct: 179 KVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIH 238

Query: 458 TLLLAETTQI 467
            L L +  ++
Sbjct: 239 CLALTDAGEV 248



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 27/263 (10%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P L      +K+ ++A G +    +S  G+V+  G    G+LGLG     V  P  I  L
Sbjct: 2445 PVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENL 2504

Query: 263  EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                       +VR+ SV+S              GGRH+  +T  G L ++G G  G+ G
Sbjct: 2505 SS--------FMVRKVSVHS--------------GGRHAMALTIEGKLFSWGEGEDGKLG 2542

Query: 323  HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            HG+  +   P    +     V  ++ G  H+  I   G +Y +G  ++G+LG G +    
Sbjct: 2543 HGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHL 2602

Query: 383  VPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
             PK +++    S R   ++CG+R   +  LT+DG V SWG   +G+LG G S   ++P+ 
Sbjct: 2603 KPKKVQS--FTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNP 2660

Query: 441  V-PIHGFLPRNIACGWWHTLLLA 462
            V  + G     +ACG   +L L+
Sbjct: 2661 VEKLQGQGVCKVACGAQFSLALS 2683



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 126/308 (40%), Gaps = 82/308 (26%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            V+   V +GGRH + L+  G+++ WG G +G+LG G+R+                   D 
Sbjct: 2509 VRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNC-----------------DH 2551

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+             S V++++CG  HSA +  +G L T+G G YG+ GHG     L+
Sbjct: 2552 PKLI--------DTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLK 2603

Query: 332  PSYASSL-----MDIQ-------------------------------------------- 342
            P    S      +DI                                             
Sbjct: 2604 PKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEK 2663

Query: 343  -----VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
                 V ++A G   ++ +S  G V+ +G   + +LG G D     P++++   L  K+ 
Sbjct: 2664 LQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQIVDG--LRGKKI 2721

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G   +     P LV  + G     +ACG  
Sbjct: 2722 VDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLEGQKITRVACGSS 2781

Query: 457  HTLLLAET 464
            H++  AE+
Sbjct: 2782 HSIAWAES 2789



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 127/313 (40%), Gaps = 53/313 (16%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  H ++++  G+VY+WG           R      +V       G       G 
Sbjct: 3444 VAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGS 3503

Query: 157  QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
             SA  T+           E+    K    R        GD    L P +V    G ++  
Sbjct: 3504 HSACITQN---------HELYTWGKGRYGRL-----GHGDSEDQLLPKVVEALRGNRVID 3549

Query: 217  VA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
            VA  +G   TL L+D   VW WG G  G+LG G                  + G   P+ 
Sbjct: 3550 VACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRG-----------------GSDGCKIPMK 3592

Query: 275  VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
            V   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHG  +   RP  
Sbjct: 3593 VE--SLIGLG------VSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKR 3644

Query: 335  ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
             ++L   +V  IA G  H V  +  G VY +G N  GQLG G   A   P+L+    L+ 
Sbjct: 3645 VAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTA--LQG 3702

Query: 395  KRAKVVSCGARHS 407
            K+   V+CG+ H+
Sbjct: 3703 KKISRVACGSAHT 3715



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLGL--GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K+   P  I  L        RP+ +  G     +V + 
Sbjct: 3354 GTIYGWGHNHRGQLGSLEGAKVKL---PQTIEAL-----ASIRPVQIVGGEQTLFAVTAE 3405

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                             V+++A   GG+H+  ++  G + ++
Sbjct: 3406 GKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSW 3465

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G G  G+ GHG+ N   RP    +L    V  I+ G  H+ CI+    +Y +G  ++G+L
Sbjct: 3466 GEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRL 3525

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G G  + + +PK++E   L   R   V+CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 3526 GHGDSEDQLLPKVVEA--LRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGG 3583

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    IP  V  + G     + CG   ++ L  +
Sbjct: 3584 SDGCKIPMKVESLIGLGVSKVECGSQFSVALTRS 3617



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 122/320 (38%), Gaps = 67/320 (20%)

Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
           H +++T  GEVY+WG              G  G       G     P E+       AG+
Sbjct: 28  HFLALTREGEVYSWG-------------SGDGGKL-----GHGDTSPREEPTLVTGLAGK 69

Query: 175 EVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLNPGVKITKV 217
           +V++    S     S    S  E +T                 L P LV+   G  I  V
Sbjct: 70  QVIR---ISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDV 126

Query: 218 A--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           A  +G  HTL  +D G VW WG G  G+LG G                  + G   P   
Sbjct: 127 ACGSGDAHTLAAADDGTVWSWGDGDYGKLGRG-----------------GSDGCKNP--- 166

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
              S+      G   V ++ CG + S  +T  G++ T+G G   + GHG+ +    P   
Sbjct: 167 --KSIERLQGLG---VCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLV 221

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
            +L    V  ++ G  H + ++  G VY +G N  GQLG    Q    P L+    L SK
Sbjct: 222 EALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDCQIRPEPTLVSG--LASK 279

Query: 396 RAKVVSCGARHSAVLTEDGQ 415
               ++CG   S   +  GQ
Sbjct: 280 GIVGIACGPAQSFAWSCAGQ 299



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 3/158 (1%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P    +L  I+  QI  G      ++ EG+VY  G    
Sbjct: 3357 YGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGYGHG 3416

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G        K+LE+      R   V  G +H+  L+ DG V SWG    G+LG G
Sbjct: 3417 GRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHG 3476

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            +    + P ++  + G    +I+CG  H+  + +  ++
Sbjct: 3477 NRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHEL 3514



 Score = 45.1 bits (105), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 98/264 (37%), Gaps = 52/264 (19%)

Query: 18  KETVVYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSE 68
           +E  VY WG   G       TSP + P L         G + K V    CG   + A + 
Sbjct: 34  REGEVYSWGSGDGGKLGHGDTSPREEPTL-------VTGLAGKQVIRISCGSTHSAAVTS 86

Query: 69  SGKLITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G+L TWG          S++D+    L SG  G              V   +G AH ++
Sbjct: 87  EGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGH---------HIIDVACGSGDAHTLA 137

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR---AGEE 175
             + G V++WG            D+G  G    D      ++   Q     K    A   
Sbjct: 138 AADDGTVWSWG----------DGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFS 187

Query: 176 VVKRRKTSS---AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
           +   R  S     + E      G E     P LV    G  +  V+ G  H L L+D G+
Sbjct: 188 LALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGE 247

Query: 233 VWGWGYGGEGQLG-LGSRIKMVPT 255
           V+ WG   +GQLG +  +I+  PT
Sbjct: 248 VYCWGRNDQGQLGDIDCQIRPEPT 271



 Score = 45.1 bits (105), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 9/75 (12%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
            G  F++A + SG + TWG  D     Y   G     H   P+         V+  A G  
Sbjct: 3607 GSQFSVALTRSGAVYTWGKGD-----YYRLGHGVDDHVRRPKRVAALQGKKVITIATGSL 3661

Query: 115  HCVSVTEAGEVYTWG 129
            HCV+ T+ GEVYTWG
Sbjct: 3662 HCVASTDTGEVYTWG 3676



 Score = 38.1 bits (87), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 25/107 (23%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
            G++     P +V    G KI  VA G  H L ++D GQV+ WG    GQ G         
Sbjct: 2702 GNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQG--------- 2752

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
                     +  +   RP LV       +G  G+  +  +ACG  HS
Sbjct: 2753 --------NNTTTVNRRPQLV-------NGLEGQK-ITRVACGSSHS 2783


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 127/255 (49%), Gaps = 38/255 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++  +A G  H+ + +  G+++ +G G  G LG G R             E  +  K+
Sbjct: 371 GLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDR-------------ESLSFPKE 417

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA----VVTDAGA------LLTFGWGLYGQ 320
             LL           +G   +K +ACG  H+A    V++ +GA      L T+G G   +
Sbjct: 418 VQLL-----------SGLKTIK-VACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNR 465

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHGS +  L P+  SSL+D    QIA G   TV ++  G V+  GG   GQLG      
Sbjct: 466 LGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTMGGTAHGQLGNPASDG 525

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           + +P L++  ++  +  + VSCGA H AVLT   ++ +WG    G+LG GD+ DR  P+L
Sbjct: 526 K-MPTLVQDSLV-GEFVEEVSCGAHHVAVLTSRSELYTWGKGANGRLGHGDTEDRRTPTL 583

Query: 441 V-PIHGFLPRNIACG 454
           V  +     +NI+CG
Sbjct: 584 VEALKDRHVKNISCG 598



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++IACG RH A+VT  G + T+G    G+ GHG   D   P     L    V+ +A G 
Sbjct: 267 VQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGE 326

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  ++  G +Y +G      G LG G D +  +PK +  P LE  +   ++CG  HSA
Sbjct: 327 YHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGP-LEGLQVFSIACGTWHSA 385

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           + T +G++ ++G   +G LG GD    + P  V  + G     +ACG WHT  + E
Sbjct: 386 LATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVACGVWHTAAIVE 441



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 126/309 (40%), Gaps = 45/309 (14%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-------- 252
           L+P  +  N  + + ++A G RH  +++  G+V+ WG    G+LG G             
Sbjct: 254 LTPKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEF 313

Query: 253 --VPTPHLIPCLEHAA-------------SGKDRPLLVRQGSVNS-------SGKAGRSY 290
             V     + C E+                G     L+ QG+  S       SG      
Sbjct: 314 LAVTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQ 373

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  IACG  HSA+ T  G L TFG G +G  GHG       P     L  ++  ++A G+
Sbjct: 374 VFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVACGV 433

Query: 351 WHTVCI---------SVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           WHT  I         +V  R ++ +G     +LG G      +P  + + I        +
Sbjct: 434 WHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLI--DYNFHQI 491

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHT 458
           +CG   +  LT  G V + G   +GQLG   + D  +P+LV   + G     ++CG  H 
Sbjct: 492 ACGQTLTVALTTSGHVFTMGGTAHGQLG-NPASDGKMPTLVQDSLVGEFVEEVSCGAHHV 550

Query: 459 LLLAETTQI 467
            +L   +++
Sbjct: 551 AVLTSRSEL 559



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 6/138 (4%)

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
           ND L P    S + + V+QIA G+ H   ++ +G V+ +G    G+LG G +   + P+L
Sbjct: 251 NDVLTPKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRL 310

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSW--GWNKYGQLGLGDSIDRNIPSLV--P 442
           +E   L       V+CG  H+  +T  G + +W  G    G LG G  +   IP  V  P
Sbjct: 311 VE--FLAVTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGP 368

Query: 443 IHGFLPRNIACGWWHTLL 460
           + G    +IACG WH+ L
Sbjct: 369 LEGLQVFSIACGTWHSAL 386



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 101/248 (40%), Gaps = 64/248 (25%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTL----ILSDMG------QVWGWGYGGEGQLGLGSR-IK 251
           P  V L  G+K  KVA G  HT     ++S  G      +++ WG G + +LG GS+   
Sbjct: 415 PKEVQLLSGLKTIKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTY 474

Query: 252 MVPT---------PHLIPC------------------------LEHAASGKDRPLLVRQG 278
           ++PT          H I C                        L + AS    P LV+  
Sbjct: 475 LLPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTMGGTAHGQLGNPASDGKMPTLVQDS 534

Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
            V         +V+E++CG  H AV+T    L T+G G  G+ GHG T D+  P+   +L
Sbjct: 535 LVGE-------FVEEVSCGAHHVAVLTSRSELYTWGKGANGRLGHGDTEDRRTPTLVEAL 587

Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
            D  V+ I+ G   T  I +    +V G +Q   + +G  QA    +         KR  
Sbjct: 588 KDRHVKNISCGSNFTTSICIHK--WVSGADQ--SVCSGCRQAFGFTR---------KRHN 634

Query: 399 VVSCGARH 406
             +CG  H
Sbjct: 635 CYNCGLVH 642


>gi|402853137|ref|XP_003891257.1| PREDICTED: protein RCC2 [Papio anubis]
 gi|383419997|gb|AFH33212.1| protein RCC2 [Macaca mulatta]
 gi|383419999|gb|AFH33213.1| protein RCC2 [Macaca mulatta]
 gi|384948234|gb|AFI37722.1| protein RCC2 [Macaca mulatta]
 gi|387541966|gb|AFJ71610.1| protein RCC2 [Macaca mulatta]
          Length = 523

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 54/282 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 148 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 204

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 205 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 242

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 243 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 301

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 302 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 361

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAET 464
           +LG  +  D  +P LV +  F  R    I  G+  +  ++E 
Sbjct: 362 RLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEV 403



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 56/307 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 177 RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 236

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 237 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 271

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 272 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 331

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 332 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 391

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLL 460
            G   S  ++E G +  WG     +           P  V  + G+  R++ACG    ++
Sbjct: 392 AGYTCSFAVSEVGGLFFWGATNTSREST------MYPKAVQDLCGWRIRSLACGKSSIIV 445

Query: 461 LAETTQI 467
            A+ + I
Sbjct: 446 AADESTI 452



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           SC A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   +  + ACG  HTL
Sbjct: 158 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 216

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 217 ALTETGSV 224


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 95/179 (53%), Gaps = 4/179 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++IACG RH A+ T  G +  +G  L G+ GHG+  D  RP    +L    VE +A G 
Sbjct: 245 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGE 304

Query: 351 WHTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  I+  G +Y +G   +  G LG G   +  +PK +  P LE  +   VSCG+ HSA
Sbjct: 305 FHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGP-LEGVQVLSVSCGSWHSA 363

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQ 466
           + T  G+V ++G   +G LG G+      P  V  + GF    +ACG WH+  + ETT 
Sbjct: 364 LTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIVETTN 422



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 121/268 (45%), Gaps = 43/268 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + + ++A G RH  + +  G+V+ WG    G+LG G+   +                  R
Sbjct: 243 LDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADI-----------------SR 285

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQ 329
           P LV   +V        S V+ +ACG  H+  +T +G L T+G G Y  G  GHG+    
Sbjct: 286 PKLVEALAV--------SNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSH 337

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P   S  ++ +QV  ++ G WH+   +  G+V+ FG   FG LG G       PK +E
Sbjct: 338 WLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVE 397

Query: 389 TPILESKRAKVVSCGARHSAVLTE----------DGQVLSWGWNKYGQLGLGDSIDRNIP 438
           T  L   R   V+CG  HSA + E            ++ +WG      LG GD   R +P
Sbjct: 398 T--LSGFRTIKVACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVP 455

Query: 439 SLV-PIHGFLPRNIACGWWHTLLLAETT 465
           + V  +  +    +ACG  H++ +A +T
Sbjct: 456 TCVQSLIDYNFHQVACG--HSMTIALST 481



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 117/258 (45%), Gaps = 44/258 (17%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           GV++  V+ G  H+ + +  G+V+ +G G  G LG G+R   V  P  +  L        
Sbjct: 349 GVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNR-HTVAYPKEVETL-------- 399

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD----------AGALLTFGWGLYGQ 320
                          +G   +K +ACG  HSA + +          +  L T+G G    
Sbjct: 400 ---------------SGFRTIK-VACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNP 443

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG  + +L P+   SL+D    Q+A G   T+ +S  G V+  G +  GQLG      
Sbjct: 444 LGHGDKDARLVPTCVQSLIDYNFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDG 503

Query: 381 ENVPKLLETPI---LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           ++      TP+   L  +  + +SCG+ H AVLT   +V +WG    G+LG G   D+  
Sbjct: 504 KH-----PTPVQDRLAGELVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKK 558

Query: 438 PSLV-PIHGFLPRNIACG 454
           P+LV  +     ++IACG
Sbjct: 559 PTLVEALKDRHVKSIACG 576



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 6/147 (4%)

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
           S  D L P    S + + V+QIA G  H    + +G V+ +G    G+LG G D   + P
Sbjct: 227 SKADILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRP 286

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPSLV- 441
           KL+E   L     + V+CG  H+  +T  G + +WG   Y  G LG G      +P  V 
Sbjct: 287 KLVEA--LAVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVS 344

Query: 442 -PIHGFLPRNIACGWWHTLLLAETTQI 467
            P+ G    +++CG WH+ L   + ++
Sbjct: 345 GPLEGVQVLSVSCGSWHSALTTSSGKV 371



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 122/323 (37%), Gaps = 55/323 (17%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGE-------TPEPFPLPTE-ASVVKAAAGWAHC 116
           A + SG L TWG        Y  +G  G         P+    P E   V+  + G  H 
Sbjct: 309 AITASGDLYTWGDG------YYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHS 362

Query: 117 VSVTEAGEVYTWG----------WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
              T +G+V+T+G           R  V   K         + +       SA   E   
Sbjct: 363 ALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIVE--- 419

Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
            +  +AG  V+ R+  +    +      GD+   L P  V         +VA G   T+ 
Sbjct: 420 -TTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQVACGHSMTIA 478

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           LS  G V+  G    GQLG        PTP     ++   +G+                 
Sbjct: 479 LSTSGHVFTMGSSSNGQLGNPKSDGKHPTP-----VQDRLAGE----------------- 516

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
               V+EI+CG  H AV+T    + T+G G  G+ GHG   D+ +P+   +L D  V+ I
Sbjct: 517 ---LVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSI 573

Query: 347 AAGLWHTVCISVEGRVYVFGGNQ 369
           A G   T CI +    +V G +Q
Sbjct: 574 ACGSNFTTCICIHK--WVSGADQ 594


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 121/266 (45%), Gaps = 36/266 (13%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           L TLN    +  V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L  
Sbjct: 72  LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNG 127

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
                                     + +++CG  HS  ++    + ++G   +GQ G G
Sbjct: 128 IK------------------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 163

Query: 325 S-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
                Q  P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NV
Sbjct: 164 KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS---GRNV 220

Query: 384 PKLLETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           P     P+    L++     +SCG  H+AVL +DG+V ++G N  GQLG   + ++  P 
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280

Query: 440 LVPIHGFLPRNIACGWWHTLLLAETT 465
           LV     L   I CG +HTL    TT
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTT 306



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + +P  +T   G+KI +V+ G  H+L LS   QV+ WG    GQLGLG  +    +P  +
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY- 318
             LE        PL                   ++A GG HS  ++  G   +FGWG   
Sbjct: 176 RSLEGI------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNS 209

Query: 319 -GQCGHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ      N  +   +P    +L ++ V  I+ G  HT  +  +G+V+ FG N  GQLG
Sbjct: 210 AGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 270 YSPTPEKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG        +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQA--LETLNVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      +  ++G     ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|281346734|gb|EFB22318.1| hypothetical protein PANDA_013306 [Ailuropoda melanoleuca]
          Length = 427

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 52  GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPKLIEGLSHEV-- 108

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++L FG    GQ G G+  D
Sbjct: 109 ----------------------IVSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQTD 146

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 147 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 205

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 206 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 265

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 266 RLGHAEQKDEMVPRLVKLFDF 286



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 103/259 (39%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V  +G    GQLG
Sbjct: 81  RNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQLG 140

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 141 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 175

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 176 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 235

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 236 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 295

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 296 AGYTCSFAVSEVGGLFFWG 314



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 77/204 (37%), Gaps = 29/204 (14%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P V +  VA G  HTL+L    +V+ WG+GG G+LG   + K    P L+   +    G 
Sbjct: 233 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDFPGRG- 290

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                                  +I  G   S  V++ G L  F WG      + S    
Sbjct: 291 ---------------------ASQIYAGYTCSFAVSEVGGL--FFWG----ATNTSREST 323

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           + P     L   ++  +A G    +  + E  +       FG+LG G  + ++     E 
Sbjct: 324 MYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEV 383

Query: 390 PILESKRAKVVSCGARHSAVLTED 413
             L+    + V+ G  HS V+  D
Sbjct: 384 KTLDGIFTEQVAMGYAHSLVIARD 407



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 392 LESKRAKVVSCG--ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
           L   R + V  G  A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   + 
Sbjct: 50  LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVI 109

Query: 449 RNIACGWWHTLLLAETTQI 467
            + ACG  HTL L ET  +
Sbjct: 110 VSAACGRNHTLALTETGSV 128


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 121/266 (45%), Gaps = 36/266 (13%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           L TLN    +  V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L  
Sbjct: 72  LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNG 127

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
                                     + +++CG  HS  ++    + ++G   +GQ G G
Sbjct: 128 IK------------------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 163

Query: 325 S-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
                Q  P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NV
Sbjct: 164 KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS---GRNV 220

Query: 384 PKLLETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           P     P+    L++     +SCG  H+AVL +DG+V ++G N  GQLG   + ++  P 
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280

Query: 440 LVPIHGFLPRNIACGWWHTLLLAETT 465
           LV     L   I CG +HTL    TT
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTT 306



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + +P  +T   G+KI +V+ G  H+L LS   QV+ WG    GQLGLG  +    +P  +
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY- 318
             LE        PL                   ++A GG HS  ++  G   +FGWG   
Sbjct: 176 RSLEGI------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNS 209

Query: 319 -GQCGHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ      N  +   +P    +L ++ V  I+ G  HT  +  +G+V+ FG N  GQLG
Sbjct: 210 AGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 270 YSPTPEKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG        +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQA--LETLNVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      +  ++G     ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 39/256 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           IT+V  G +HT+ L+  G+V+ WG    GQLGLG   +    P  +  LE          
Sbjct: 743 ITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYC-KPMPVTALE---------- 791

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                         +  V +IA G  H AV+T++  +L FG G       G+ +    P+
Sbjct: 792 --------------KYNVLQIASGSTHCAVLTNSKEVLVFGNG----AAMGAASIISIPT 833

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
              SL  + ++++  G + T  IS  G VY +G  Q  +LG G +Q E+ PKL+E   L 
Sbjct: 834 LVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQ--ELGHGNNQTESTPKLVEA--LR 889

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG--LGD-SIDRNIPSLVPIHGFLPRN 450
           ++  + +SCG RH+A LT+ G++ + G + +GQLG   GD +  + I SL     F+  +
Sbjct: 890 NQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQAGDQNKPKKIESLTKT-TFI--S 946

Query: 451 IACGWWHTLLLAETTQ 466
           ++CG  + + L +TT+
Sbjct: 947 VSCGENYNIALFDTTR 962



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 122/252 (48%), Gaps = 31/252 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL-IPCLEHAASGKDRP 272
           I  +++G  ++  L++ G V+ WG G          +K  P P L IP +E      D+ 
Sbjct: 636 ICSISSGSYYSAALTENGDVYMWGRGS---------VKNPPVPVLGIPQIE------DQL 680

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
           L ++  S+          +  ++ G  HSA V   G LLT+G G  GQ GHG T +Q+ P
Sbjct: 681 LPIKLESLTD--------IVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEP 732

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               SL    + Q+  G  HT+C++  G+VY +G +++GQLG G        K +    L
Sbjct: 733 KVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLG--DTTRYCKPMPVTAL 790

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-I 451
           E      ++ G+ H AVLT   +VL +G        +G +   +IP+LVP   +L  + +
Sbjct: 791 EKYNVLQIASGSTHCAVLTNSKEVLVFG----NGAAMGAASIISIPTLVPSLKYLHIDKL 846

Query: 452 ACGWWHTLLLAE 463
            CG + T  ++E
Sbjct: 847 CCGHYSTAAISE 858



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 145/360 (40%), Gaps = 68/360 (18%)

Query: 22  VYMWGYLPGTSPEKSPIL-------SPIPARLCGGDSWKDVCGGGCGF--ALATSESGKL 72
           VYMWG     +P   P+L         +P +L   +S  D+     GF  + A   +G+L
Sbjct: 655 VYMWGRGSVKNP-PVPVLGIPQIEDQLLPIKL---ESLTDIVVVSIGFYHSAAVRANGEL 710

Query: 73  ITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGW 130
           +TWG   +EGQ  L  G      EP  + +  S  + +   G  H + +T+ G+VYTWG 
Sbjct: 711 LTWG-VGEEGQ--LGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGS 767

Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
            E          +G  G    D+T     +P       +K    ++       +    S+
Sbjct: 768 SE----------YGQLG--LGDTTRYCKPMPVTAL---EKYNVLQIASGSTHCAVLTNSK 812

Query: 191 N-------PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
                    A G       P LV     + I K+  G   T  +S+ G V+ WG G E  
Sbjct: 813 EVLVFGNGAAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQE-- 870

Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
           LG G+  +   TP L+  L + +                        +++I+CGGRH+A 
Sbjct: 871 LGHGNN-QTESTPKLVEALRNQS------------------------IRQISCGGRHTAF 905

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           +TD+G + T G   +GQ GH +  DQ +P    SL       ++ G  + + +    R +
Sbjct: 906 LTDSGRIFTSGKDSFGQLGHQA-GDQNKPKKIESLTKTTFISVSCGENYNIALFDTTRSF 964


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 29/201 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI------PCLEHAAS 267
           I ++  G  H+L LS  G+++ WG   +GQLG+G       TP ++      P ++ +A 
Sbjct: 154 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 213

Query: 268 GKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVVT 305
                 L   G+V S G+        G +Y KE               +ACGG H+A++T
Sbjct: 214 EAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLT 273

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYV 364
            +G + TFG G YGQ GH ST ++LRP   + L+  +V QIA G  HT+  +S  G+V+ 
Sbjct: 274 KSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFS 333

Query: 365 FGGNQFGQLGTGVDQAENVPK 385
           FG  + GQLG G  + + +P+
Sbjct: 334 FGSGKEGQLGNGGTRNQLIPR 354



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 118/265 (44%), Gaps = 41/265 (15%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  + L   +KI  +  G  H L+LS  G+ + + Y                       +
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS----------------------I 140

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           EHA   + + +L  +  +            +I CG  HS  ++  G L  +G  L GQ G
Sbjct: 141 EHA---RFQCILQEKNII------------QITCGDYHSLALSKGGELFAWGQNLDGQLG 185

Query: 323 HGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G        P    +L  + + QI+AG  H++ +S+ G VY +G N  GQLG G    +
Sbjct: 186 VGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNK 245

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
             P  +E   L+ ++ + ++CG  H+A+LT+ G V ++G  KYGQLG   + +   P LV
Sbjct: 246 ESPSCIEA--LDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLV 303

Query: 442 P-IHGFLPRNIACGWWHTLLLAETT 465
             + G     IACG  HTL     T
Sbjct: 304 TGLVGNRVTQIACGRQHTLAYVSDT 328



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 29/231 (12%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           E ++++   G  H +++++ GE++ WG +       V R F S  +   +     S +P 
Sbjct: 151 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 207

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
            Q    +  +    +     S  R +      G  +   SP  +      K+  +A GG 
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 267

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           HT +L+  G V+ +G G  GQLG                  ++   + RP LV       
Sbjct: 268 HTALLTKSGLVFTFGDGKYGQLG-----------------HNSTQNELRPRLV------- 303

Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
           +G  G + V +IACG +H+ A V+D G + +FG G  GQ G+G T +QL P
Sbjct: 304 TGLVG-NRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 353



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 30/219 (13%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADD----EGQSYLTSGKHGETPEPFPLPTEASV 106
           K++    CG   +LA S+ G+L  WG   D     G+ + ++     TPE     +   +
Sbjct: 152 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPL 207

Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
           V+ +AG AH ++++ +G VY+WG  +C          G   ++ K+S     AL  ++  
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKESPSCIEALDDQKVE 260

Query: 167 -------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
                   +       +V         +   N    +    L P LVT   G ++T++A 
Sbjct: 261 FLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNE----LRPRLVTGLVGNRVTQIAC 316

Query: 220 GGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
           G +HTL  +SD G+V+ +G G EGQLG  G+R +++P P
Sbjct: 317 GRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRP 355


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 121/266 (45%), Gaps = 36/266 (13%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           L TLN    +  V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L  
Sbjct: 72  LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNG 127

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
                                     + +++CG  HS  ++    + ++G   +GQ G G
Sbjct: 128 IK------------------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 163

Query: 325 S-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
                Q  P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NV
Sbjct: 164 KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS---GRNV 220

Query: 384 PKLLETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           P     P+    L++     +SCG  H+AVL +DG+V ++G N  GQLG   + ++  P 
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280

Query: 440 LVPIHGFLPRNIACGWWHTLLLAETT 465
           LV     L   I CG +HTL    TT
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTT 306



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + +P  +T   G+KI +V+ G  H+L LS   QV+ WG    GQLGLG  +    +P  +
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY- 318
             LE        PL                   ++A GG HS  ++  G   +FGWG   
Sbjct: 176 RSLEGI------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNS 209

Query: 319 -GQCGHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ      N  +   +P    +L ++ V  I+ G  HT  +  +G+V+ FG N  GQLG
Sbjct: 210 AGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 270 YSPTPEKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG        +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQA--LETLNVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      +  ++G     ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
 gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
          Length = 516

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 91/176 (51%), Gaps = 9/176 (5%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           VKEI+CG  H+A+V  +G +  FG   +GQ G G T    +PS   SL   Q   +A G 
Sbjct: 38  VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGK 97

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            HT+  +   +++ FG N  GQLG G      VP+++ T + ++     +S G  HSA L
Sbjct: 98  SHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFL 157

Query: 411 TEDGQVLSWGWNKYGQLGLGDS----IDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           TE+G V  WG N  GQ G+ +       R I    PI+      I+CG++HT  ++
Sbjct: 158 TEEGSVYIWGDNSDGQCGIKNENYLLNPRKIEFQNPINS-----ISCGYYHTAFIS 208



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 135/301 (44%), Gaps = 53/301 (17%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           LS      N  VK  +++ G  HT ++   G+V+ +G    GQLG G   K+V  P  + 
Sbjct: 27  LSSHFFVRNDPVK--EISCGDEHTALVCKSGRVFLFGKNDFGQLGFG-HTKIVNKPSCLK 83

Query: 261 CLE-----HAASGKDRPLLVRQGS------VNSSGKAG-------------------RSY 290
            L+     H A GK   L+  + +       NS G+ G                    + 
Sbjct: 84  SLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNN 143

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ--VEQIAA 348
           +  ++ G  HSA +T+ G++  +G    GQCG  + N  L P      ++ Q  +  I+ 
Sbjct: 144 IIALSAGCHHSAFLTEEGSVYIWGDNSDGQCGIKNENYLLNPRK----IEFQNPINSISC 199

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G +HT  IS+ G+VY FG +  G+LG       +VP+ +E      +    V CG  H+ 
Sbjct: 200 GYYHTAFISL-GKVYTFGEDDNGKLGRSDKLPNDVPEGVELD----ENCISVKCGGSHTI 254

Query: 409 VLTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFLPRN-----IACGWWHTLLLA 462
           +LTE G+  ++G N  GQLGLG+   + +IP  V    F   N     + CG  H+  L 
Sbjct: 255 ILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRV---NFTDENVNLIYVTCGESHSAFLT 311

Query: 463 E 463
           +
Sbjct: 312 D 312



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 138/298 (46%), Gaps = 43/298 (14%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS----------RIKMV 253
           CL +L P   I  VA G  HTLI ++  +++ +G   +GQLG+G              + 
Sbjct: 81  CLKSLKPFQSI-HVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLE 139

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAG---------------RSYVKE 293
            T ++I     +A       L  +GSV     NS G+ G               ++ +  
Sbjct: 140 KTNNIIAL---SAGCHHSAFLTEEGSVYIWGDNSDGQCGIKNENYLLNPRKIEFQNPINS 196

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL-MDIQVEQIAAGLWH 352
           I+CG  H+A ++  G + TFG    G+ G     D+L       + +D     +  G  H
Sbjct: 197 ISCGYYHTAFIS-LGKVYTFGEDDNGKLGRS---DKLPNDVPEGVELDENCISVKCGGSH 252

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLT 411
           T+ ++  G+ Y FG N  GQLG G  + E ++P+ +     E+     V+CG  HSA LT
Sbjct: 253 TIILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTD-ENVNLIYVTCGESHSAFLT 311

Query: 412 EDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAETTQI 467
           ++G++ + G  + G+L   D S +   P+ + +   F    ++CG  HT++LA+  ++
Sbjct: 312 DEGKLYTCGDGRNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVLAKALKL 369


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 123/245 (50%), Gaps = 17/245 (6%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G++I  VA G  HT +++  GQ++ +G G  G LG G R + V  P  +  L        
Sbjct: 384 GLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDR-QNVSYPREVESL-------- 434

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
             L +R  +V        + V+ IA    HS     +G L T+G G   + GHG    +L
Sbjct: 435 --LGLRTIAVACGVWHTAAVVEVIAT---HSGTSISSGKLFTWGDGDKNRLGHGDKEARL 489

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
           +P+  S+L+D    +IA G   TV ++  GRV+  G   +GQLG+ +   + VP L+   
Sbjct: 490 KPTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLSDGK-VPCLVGDK 548

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPR 449
           I   +  + ++CGA H AVLT   +V +WG    G+LG GD  DR  P+LV  +     +
Sbjct: 549 I-AGESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVK 607

Query: 450 NIACG 454
            IACG
Sbjct: 608 YIACG 612



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 97/176 (55%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  IACG RH+++VT  G + T+G    G+ GHG   + ++P    +L+   ++ +A G 
Sbjct: 280 VHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALISTTIDFVACGE 339

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +H+  +++ G +Y +G   +  G LG G + +  +PK +  P LE  +   V+CG  H+A
Sbjct: 340 FHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGP-LEGLQIAFVACGPWHTA 398

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           ++T  GQ+ ++G   +G LG GD  + + P  V  + G     +ACG WHT  + E
Sbjct: 399 LITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVE 454



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 131/312 (41%), Gaps = 50/312 (16%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P  +  N  + +  +A G RH  +++  G+V+ WG    G+LG G   K V  P L+ 
Sbjct: 267 LLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVG-KNVVQPRLVE 325

Query: 261 CL-----EHAASGKDRPLLVRQGS--------VNSSGKAGRS------------------ 289
            L     +  A G+     V            ++++G  G                    
Sbjct: 326 ALISTTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGL 385

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
            +  +ACG  H+A++T  G L TFG G +G  GHG   +   P    SL+ ++   +A G
Sbjct: 386 QIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACG 445

Query: 350 LWHTVCISVE------------GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           +WHT  + VE            G+++ +G     +LG G  +A   P  +   I      
Sbjct: 446 VWHTAAV-VEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALI--DYNF 502

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGW 455
             ++CG   +  LT  G+V + G   YGQLG   S D  +P LV   I G     IACG 
Sbjct: 503 HKIACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLS-DGKVPCLVGDKIAGESIEEIACGA 561

Query: 456 WHTLLLAETTQI 467
           +H  +L    ++
Sbjct: 562 YHVAVLTSKNEV 573



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S + + V  IA G+ H   ++ +G V+ +G    G+LG GV +    P+L+
Sbjct: 265 DVLLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLV 324

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSW--GWNKYGQLGLGDSIDRNIPSLV--PI 443
           E  I  S     V+CG  HS  +T  G++ +W  G +  G LG G ++   IP  +  P+
Sbjct: 325 EALI--STTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPL 382

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G     +ACG WHT L+  T Q+
Sbjct: 383 EGLQIAFVACGPWHTALITSTGQL 406



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 25/162 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V+        K+A G   T+ L+  G+V+  G    GQLG         
Sbjct: 483 GDKEARLKPTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGSTVYGQLGSSL------ 536

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           +   +PCL                      K     ++EIACG  H AV+T    + T+G
Sbjct: 537 SDGKVPCL-------------------VGDKIAGESIEEIACGAYHVAVLTSKNEVYTWG 577

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  G+ GHG   D+  P+   +L D  V+ IA G  ++  I
Sbjct: 578 KGANGRLGHGDIEDRKTPALVEALKDRHVKYIACGSNYSAAI 619


>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
 gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
          Length = 419

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 137/305 (44%), Gaps = 55/305 (18%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCL--------- 262
           +I +++AG  H+  ++  G+++ WG    GQLGLG + + +VP P  + CL         
Sbjct: 118 EIVQISAGYHHSCAITVDGELYTWGKNSNGQLGLGKKAENVVPVPTKVECLSGINIKMVA 177

Query: 263 ---EHAASGKD-------------RPLLVRQGSVNSSGKAGRSY------------VKEI 294
              EH+ +  D             R     Q S+    ++   Y            VK I
Sbjct: 178 LASEHSIAVTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNI 237

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           A G  HSA + + G++  FG     +   G  N+   PS    L   Q  ++A G +HT 
Sbjct: 238 AAGLLHSACIDENGSVYIFGEKAVDKLAFGDANNATTPSMIGKLPYSQ--EVACGGYHTC 295

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
            I+  G +Y +G N+ G LG G     ++P+ +E P L S   K VSCG +H+A ++E G
Sbjct: 296 VITSGGELYTWGSNENGCLGNGSIDVLHIPERVEGPFLRSPVEK-VSCGWKHTAAISE-G 353

Query: 415 QVLSWGW------------NKYGQLGLGDSIDRNIPSLVPIHGFLPR-NIACGWWHTLLL 461
            V +WGW            +  GQLG GD  D   P+LV     +    ++CG+ HT  +
Sbjct: 354 NVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCGFNHTGAI 413

Query: 462 AETTQ 466
            E+  
Sbjct: 414 LESVD 418



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 125/291 (42%), Gaps = 44/291 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----AAS 267
            +  ++ GG HTL L++ G+V+  G    GQLG+ +       P  +  L+      +A 
Sbjct: 66  NLKSISCGGAHTLFLTETGRVYATGLNDFGQLGVSNNTTYCMEPLEVSGLKKEIVQISAG 125

Query: 268 GKDRPLLVRQGSV-----NSSGKAGRS-------------------YVKEIACGGRHSAV 303
                 +   G +     NS+G+ G                      +K +A    HS  
Sbjct: 126 YHHSCAITVDGELYTWGKNSNGQLGLGKKAENVVPVPTKVECLSGINIKMVALASEHSIA 185

Query: 304 VTDAGALLTFGWGLYGQ---------CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           VTD G  L++G G  G+          G   ++ +  P +   L  ++V+ IAAGL H+ 
Sbjct: 186 VTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSA 245

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
           CI   G VY+FG     +L  G       P +    I +   ++ V+CG  H+ V+T  G
Sbjct: 246 CIDENGSVYIFGEKAVDKLAFGDANNATTPSM----IGKLPYSQEVACGGYHTCVITSGG 301

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAE 463
           ++ +WG N+ G LG G     +IP  V  P        ++CGW HT  ++E
Sbjct: 302 ELYTWGSNENGCLGNGSIDVLHIPERVEGPFLRSPVEKVSCGWKHTAAISE 352



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 33/242 (13%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG G  G+LG G+   M                  RP L+   S ++S       +K I+
Sbjct: 35  WGNGDYGRLGYGNLDSMW-----------------RPKLMNSSSFHNSN------LKSIS 71

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGG H+  +T+ G +   G   +GQ G  +           S +  ++ QI+AG  H+  
Sbjct: 72  CGGAHTLFLTETGRVYATGLNDFGQLGVSNNTTYCMEPLEVSGLKKEIVQISAGYHHSCA 131

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           I+V+G +Y +G N  GQLG G      VP   +   L     K+V+  + HS  +T+ GQ
Sbjct: 132 ITVDGELYTWGKNSNGQLGLGKKAENVVPVPTKVECLSGINIKMVALASEHSIAVTDGGQ 191

Query: 416 V---------LSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
                          ++   LG   S     P  +  + G   +NIA G  H+  + E  
Sbjct: 192 ALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENG 251

Query: 466 QI 467
            +
Sbjct: 252 SV 253



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 357 SVEGR---VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           S EGR     V+G   +G+LG G   +   PKL+ +    +   K +SCG  H+  LTE 
Sbjct: 24  SSEGRKRSAAVWGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHTLFLTET 83

Query: 414 GQVLSWGWNKYGQLGLGDS 432
           G+V + G N +GQLG+ ++
Sbjct: 84  GRVYATGLNDFGQLGVSNN 102


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 121/266 (45%), Gaps = 36/266 (13%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           L TLN    +  V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L  
Sbjct: 72  LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNG 127

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
                                     + +++CG  HS  ++    + ++G   +GQ G G
Sbjct: 128 IK------------------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 163

Query: 325 S-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
                Q  P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL        NV
Sbjct: 164 KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS---GRNV 220

Query: 384 PKLLETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           P     P+    L++     +SCG  H+AVL +DG+V ++G N  GQLG   + ++  P 
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280

Query: 440 LVPIHGFLPRNIACGWWHTLLLAETT 465
           LV     L   I CG +HTL    TT
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTT 306



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           + +P  +T   G+KI +V+ G  H+L LS   QV+ WG    GQLGLG  +    +P  +
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY- 318
             LE        PL                   ++A GG HS  ++  G   +FGWG   
Sbjct: 176 RSLEGI------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNS 209

Query: 319 -GQCGHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ      N  +   +P    +L ++ V  I+ G  HT  +  +G+V+ FG N  GQLG
Sbjct: 210 AGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 270 YSPTPEKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +    RV   G N  GQLG        +P+ ++   LE+    +VS
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQA--LETLNVDLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+   I      +  ++G     ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 29/201 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI------PCLEHAAS 267
           I ++  G  H+L LS  G+++ WG   +GQLG+G       TP ++      P ++ +A 
Sbjct: 149 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 208

Query: 268 GKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVVT 305
                 L   G+V S G+        G +Y KE               +ACGG H+A++T
Sbjct: 209 EAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLT 268

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYV 364
            +G + TFG G YGQ GH ST ++LRP   + L+  +V QIA G  HT+  +S  G+V+ 
Sbjct: 269 KSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFS 328

Query: 365 FGGNQFGQLGTGVDQAENVPK 385
           FG  + GQLG G  + + +P+
Sbjct: 329 FGSGKEGQLGNGGTRNQLIPR 349



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 118/265 (44%), Gaps = 41/265 (15%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  + L   +KI  +  G  H L+LS  G+ + + Y                       +
Sbjct: 98  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS----------------------I 135

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           EHA   + + +L  +  +            +I CG  HS  ++  G L  +G  L GQ G
Sbjct: 136 EHA---RFQCILQEKNII------------QITCGDYHSLALSKGGELFAWGQNLDGQLG 180

Query: 323 HGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G        P    +L  + + QI+AG  H++ +S+ G VY +G N  GQLG G    +
Sbjct: 181 VGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNK 240

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
             P  +E   L+ ++ + ++CG  H+A+LT+ G V ++G  KYGQLG   + +   P LV
Sbjct: 241 ESPSCIEA--LDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLV 298

Query: 442 P-IHGFLPRNIACGWWHTLLLAETT 465
             + G     IACG  HTL     T
Sbjct: 299 TGLVGNRVTQIACGRQHTLAYVSDT 323



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 29/231 (12%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           E ++++   G  H +++++ GE++ WG +       V R F S  +   +     S +P 
Sbjct: 146 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 202

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
            Q    +  +    +     S  R +      G  +   SP  +      K+  +A GG 
Sbjct: 203 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 262

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           HT +L+  G V+ +G G  GQLG                  ++   + RP LV       
Sbjct: 263 HTALLTKSGLVFTFGDGKYGQLG-----------------HNSTQNELRPRLV------- 298

Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
           +G  G   V +IACG +H+ A V+D G + +FG G  GQ G+G T +QL P
Sbjct: 299 TGLVGNR-VTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 348



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 30/219 (13%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADD----EGQSYLTSGKHGETPEPFPLPTEASV 106
           K++    CG   +LA S+ G+L  WG   D     G+ + ++     TPE     +   +
Sbjct: 147 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPL 202

Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
           V+ +AG AH ++++ +G VY+WG  +C          G   ++ K+S     AL  ++  
Sbjct: 203 VQISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKESPSCIEALDDQKVE 255

Query: 167 -------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
                   +       +V         +   N    +    L P LVT   G ++T++A 
Sbjct: 256 FLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNE----LRPRLVTGLVGNRVTQIAC 311

Query: 220 GGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
           G +HTL  +SD G+V+ +G G EGQLG  G+R +++P P
Sbjct: 312 GRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRP 350


>gi|387015158|gb|AFJ49698.1| Regulator of chromosome condensation-like [Crotalus adamanteus]
          Length = 424

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 181/449 (40%), Gaps = 77/449 (17%)

Query: 26  GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
           G  P     K P L  +P ++   ++       G    +  SE+GK+ T+G  +DEG   
Sbjct: 44  GLGPDVLARKRPALLQLPEKIIQAEA-------GGVHTVCLSETGKIYTFG-CNDEGALG 95

Query: 86  LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
             + + G    P  +  +  VV+ +AG +H  ++TE G V+ WG                
Sbjct: 96  RDTSEEGSDAVPGLVDLKEKVVQVSAGDSHTAALTEDGHVFIWG---------------- 139

Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
             +F +D  G    L  ++                      EE+    SG  F    P  
Sbjct: 140 --AF-RDENGVIGLLAPQKG---------------------EENSQSTSGSLF----P-- 169

Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
           V L   V + K+A+G  H  ++S  G ++  G G  GQLG       VP    I  +   
Sbjct: 170 VELQLDVPVVKIASGSHHLALVSSTGNLYTCGCGDNGQLG------RVPQ---IFVVRGG 220

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
             G +R LL +  ++   G   +  ++++ CG   +  +T  G ++ FG   Y Q G   
Sbjct: 221 RRGLERLLLPQVVTIKQRGCKTKGNIRDVFCGSYSTIAITQEGHVVGFGLSNYYQLGSQE 280

Query: 326 TNDQLRPSYASSLMDIQVEQI--AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-N 382
                 P   ++  +     +  ++G  HTVC+  EG VY  G   +G LG G    E N
Sbjct: 281 IATYYSPKILTAFKNSTRSWVGFSSGQHHTVCLDSEGTVYSLGRADYGMLGLGKGVGEKN 340

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            P    T +    ++  V+CG R    +TEDG   +WG     QL  GD  + ++ S V 
Sbjct: 341 SP----TAVPGLPKSTSVACGERVGFSVTEDGHAFAWGMGSNLQLATGD--EEDVWSPVQ 394

Query: 443 IHGFLPRN-----IACGWWHTLLLAETTQ 466
           + G    N     +  G  HT+LL +  Q
Sbjct: 395 MSGQQLENRSVLSVTAGGQHTVLLVKDQQ 423



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 11/135 (8%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
           HS+  ++ G +LT G G  GQ G G     + RP+     +  ++ Q  AG  HTVC+S 
Sbjct: 22  HSSHQSEPGLVLTLGQGDLGQLGLGPDVLARKRPALLQ--LPEKIIQAEAGGVHTVCLSE 79

Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
            G++Y FG N  G LG  T  + ++ VP L++   L+ K  + VS G  H+A LTEDG V
Sbjct: 80  TGKIYTFGCNDEGALGRDTSEEGSDAVPGLVD---LKEKVVQ-VSAGDSHTAALTEDGHV 135

Query: 417 LSWG--WNKYGQLGL 429
             WG   ++ G +GL
Sbjct: 136 FIWGAFRDENGVIGL 150



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 109/272 (40%), Gaps = 64/272 (23%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI----PCLEHAAS 267
           VK TKV+    H+   S+ G V   G G  GQLGLG  +     P L+      ++  A 
Sbjct: 15  VKRTKVS----HSSHQSEPGLVLTLGQGDLGQLGLGPDVLARKRPALLQLPEKIIQAEAG 70

Query: 268 GKDRPLLVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVVT 305
           G     L   G +     N  G  GR                   V +++ G  H+A +T
Sbjct: 71  GVHTVCLSETGKIYTFGCNDEGALGRDTSEEGSDAVPGLVDLKEKVVQVSAGDSHTAALT 130

Query: 306 DAGALLTFGWGLY--------------GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           + G +  F WG +              G+    ST+  L P      +D+ V +IA+G  
Sbjct: 131 EDGHV--FIWGAFRDENGVIGLLAPQKGEENSQSTSGSLFPVELQ--LDVPVVKIASGSH 186

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQA-------ENVPKLLETPILESKR-------- 396
           H   +S  G +Y  G    GQLG  V Q          + +LL   ++  K+        
Sbjct: 187 HLALVSSTGNLYTCGCGDNGQLGR-VPQIFVVRGGRRGLERLLLPQVVTIKQRGCKTKGN 245

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            + V CG+  +  +T++G V+ +G + Y QLG
Sbjct: 246 IRDVFCGSYSTIAITQEGHVVGFGLSNYYQLG 277



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 13/86 (15%)

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPIH 444
           L +  IL+ KR KV      HS+  +E G VL+ G    GQLGLG D + R  P+L+   
Sbjct: 7   LEKDDILKVKRTKV-----SHSSHQSEPGLVLTLGQGDLGQLGLGPDVLARKRPALLQ-- 59

Query: 445 GFLPRNIA---CGWWHTLLLAETTQI 467
             LP  I     G  HT+ L+ET +I
Sbjct: 60  --LPEKIIQAEAGGVHTVCLSETGKI 83


>gi|301777289|ref|XP_002924055.1| PREDICTED: protein RCC2-like [Ailuropoda melanoleuca]
          Length = 447

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 72  GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPKLIEGLSHEV-- 128

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++L FG    GQ G G+  D
Sbjct: 129 ----------------------IVSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQTD 166

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 167 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 225

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 226 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 285

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 286 RLGHAEQKDEMVPRLVKLFDF 306



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 103/259 (39%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V  +G    GQLG
Sbjct: 101 RNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQLG 160

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 161 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 195

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 196 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 255

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 256 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 315

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 316 AGYTCSFAVSEVGGLFFWG 334



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 77/204 (37%), Gaps = 29/204 (14%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P V +  VA G  HTL+L    +V+ WG+GG G+LG   + K    P L+   +    G 
Sbjct: 253 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDFPGRG- 310

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                                  +I  G   S  V++ G L  F WG      + S    
Sbjct: 311 ---------------------ASQIYAGYTCSFAVSEVGGL--FFWG----ATNTSREST 343

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           + P     L   ++  +A G    +  + E  +       FG+LG G  + ++     E 
Sbjct: 344 MYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEV 403

Query: 390 PILESKRAKVVSCGARHSAVLTED 413
             L+    + V+ G  HS V+  D
Sbjct: 404 KTLDGIFTEQVAMGYAHSLVIARD 427



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 392 LESKRAKVVSCG--ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
           L   R + V  G  A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   + 
Sbjct: 70  LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVI 129

Query: 449 RNIACGWWHTLLLAETTQI 467
            + ACG  HTL L ET  +
Sbjct: 130 VSAACGRNHTLALTETGSV 148


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 167/414 (40%), Gaps = 96/414 (23%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
           ++  +L P  +        +DV   GCG    +   + G + T G  +D GQ  L   K 
Sbjct: 18  DEEIVLEPRKSDFFLNKRVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKA 71

Query: 92  GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
            + PE        ++V  + G AH +++ + G+VY WG                      
Sbjct: 72  RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
            +T  Q  LP            EE V  R   + R  SE                     
Sbjct: 111 -ATDGQLGLP----------GTEECV--RVPRNIRSLSE--------------------- 136

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++I +VA G  H+L LS   +V+ WG    GQLGLG   K   +P +I  L         
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSL--------- 187

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                          G  +  +IA GG HS V+T +GA+  FGWG   +GQ G    ND+
Sbjct: 188 --------------LGIPFA-QIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDDNDR 230

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
             P+   SL   +V  I  G  HT  ++ EG V+ FG   +GQLG      E  P K+ E
Sbjct: 231 YVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
              L       ++CG +H +A +   G++ S+G    GQLG G + +R  P  V
Sbjct: 291 ---LMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 7/175 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+++ CG RH+  V D G + T G    GQ GH       RP +  +L    +  ++ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGE 93

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            HT+ ++ +G+VY +G    GQLG  G ++   VP+ + +  L   +   V+CG  HS  
Sbjct: 94  AHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRS--LSEIQIVQVACGYYHSLA 151

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVP-IHGFLPRNIACGWWHTLLLA 462
           L++  +V SWG NKYGQLGLG    +   P ++  + G     IA G  H+ +L 
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLT 206



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   +GQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   ++A   P+      L+++    VSCG  H+  L + GQV +WG    GQL
Sbjct: 61  NDLGQLGH--EKARKRPE--HVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  +     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLPGTEECVRVPRNIRSLSEIQIV---QVACGYYHSLALSKGSEV 158


>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
 gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
          Length = 391

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 154/393 (39%), Gaps = 85/393 (21%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA  E G+L TWG        +    K   TP          +V+AA G  HC++V E 
Sbjct: 50  SLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEE 109

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G  Y WG  E    A+                        EQ     +  GE  V  R  
Sbjct: 110 GRTYAWGGNEYGQCAE------------------------EQQTKEQQNKGESKVLHRDI 145

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
           +  +               +P L           VAAGG H+++L++ G VW WG     
Sbjct: 146 TIPQR-------------CAPRLC----------VAAGGTHSVVLTEEGHVWTWG----- 177

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           Q      IK +  P  +  LE+                          V  IA G  H+ 
Sbjct: 178 QPWPPGDIKQISVPVRVQGLEN--------------------------VTMIAVGAFHNL 211

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +   G +  +G   YGQ G G T  +  P     L  + +  IAAG WH++ ++ +G V
Sbjct: 212 ALVQHGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAV 271

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLL--ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           Y +G  + G+LG G D++    K+L  +  +L  +    VSCG  HS   T  G++ S+G
Sbjct: 272 YGWGRGEHGRLGFGDDKSS---KMLPQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSFG 328

Query: 421 WNKYGQLGLGDSIDRNIPSLVPI--HGFLPRNI 451
              +G+LG G ++    P  VP+  H +   NI
Sbjct: 329 RGDHGRLGYGGAVTTGHPVEVPVSLHHYSRHNI 361



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 116/285 (40%), Gaps = 82/285 (28%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-V 291
           V  WG G +GQLGLG+                    KD   +V          A R + V
Sbjct: 7   VLAWGAGEDGQLGLGN-----------------LQDKDSVCVV---------DALRDHNV 40

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGL 350
             +  G R+S  + + G L T+GW   G  GH   T  +  PS   +L ++++ Q A G 
Sbjct: 41  VSVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGG 100

Query: 351 WHTVCISVEGRVYVFGGNQFGQLG----TGVDQAENVPKLLETPILESKRAK---VVSCG 403
           WH + +  EGR Y +GGN++GQ      T   Q +   K+L   I   +R      V+ G
Sbjct: 101 WHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAG 160

Query: 404 ARHSAVLTEDGQVLSWG--W---------------------------------------- 421
             HS VLTE+G V +WG  W                                        
Sbjct: 161 GTHSVVLTEEGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVW 220

Query: 422 ----NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
               N+YGQLG GD+  R+ P  V  + G +  +IA G WH++ L
Sbjct: 221 AWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMAL 265



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 107/269 (39%), Gaps = 43/269 (15%)

Query: 45  RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
           RLC       V  GG   ++  +E G + TWG            G   +   P  +    
Sbjct: 154 RLC-------VAAGGT-HSVVLTEEGHVWTWGQP-------WPPGDIKQISVPVRVQGLE 198

Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
           +V   A G  H +++ + GEV+ WG            ++G  G+   D+  + S +P + 
Sbjct: 199 NVTMIAVGAFHNLALVQHGEVWAWG----------NNEYGQLGT--GDTQPRSSPVPVKG 246

Query: 165 APP---SDKRAGEEVVKRRKTSSA-----REESENPASGDEFFT-LSPCLVTLNPGVKIT 215
                  D  AG           A     R E      GD+  + + P  V L  G  + 
Sbjct: 247 LTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVV 306

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           +V+ GG H++  +  G+++ +G G  G+LG G  +     P  +P   H  S   R  +V
Sbjct: 307 QVSCGGTHSVAATISGRMFSFGRGDHGRLGYGGAV-TTGHPVEVPVSLHHYS---RHNIV 362

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
            +   N S    R  VK +ACGGRH+  V
Sbjct: 363 SEDEANGS---TRWVVKLVACGGRHALAV 388



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 4/104 (3%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           V  +G  + GQLG G  Q ++   +++   L       V  G+R+S  + EDG++ +WGW
Sbjct: 7   VLAWGAGEDGQLGLGNLQDKDSVCVVDA--LRDHNVVSVVAGSRNSLAICEDGRLFTWGW 64

Query: 422 NKYGQLGL-GDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           N+ G LG   ++   + PS V  +        A G WH L + E
Sbjct: 65  NQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDE 108


>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 551

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 104/243 (42%), Gaps = 31/243 (12%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIP 260
           +P  V L  G  +T +A    H+L L+ +G V  WG    GQLG G+      P P  +P
Sbjct: 78  TPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVLAWGGNSFGQLGDGTTASSRTPVPVRLP 137

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                                       + V  IA G  HS  +T  GA+  +G    GQ
Sbjct: 138 V--------------------------GTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQ 171

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            G G+T D   P      +   V  IA GL H++ ++  G    +G N FGQLG G    
Sbjct: 172 LGDGTTTDSSLPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTTG 231

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
            + P  +  P L +  A  V+ G  HS  LT  G V +WG N +GQLG G + D + P  
Sbjct: 232 SSTP--ITVPQLPTVTA--VAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSDSSTPIA 287

Query: 441 VPI 443
           V +
Sbjct: 288 VRV 290



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 113/314 (35%), Gaps = 80/314 (25%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIP 260
           +P  V L  G  +T +AAG  H+L ++  G V+ WG    GQLG G+     +P P  +P
Sbjct: 130 TPVPVRLPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTTDSSLPVPVRLP 189

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                                       + V  IA G  HS  V   GA L +G   +GQ
Sbjct: 190 V--------------------------GTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQ 223

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            G G+T     P     L    V  +AAG  H++ ++  G VY +G N FGQLG G    
Sbjct: 224 LGDGTTTGSSTPITVPQLP--TVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSD 281

Query: 381 ENVPKLLETPILESKRAKV----------------------------------------- 399
            + P  +  P   +  A V                                         
Sbjct: 282 SSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGSSTPVAVR 341

Query: 400 ---------VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPR 449
                    V+    H+  +T     L+W  N  GQLG G + D + P  V +  G    
Sbjct: 342 VPGGATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNGTTTDSSEPVAVSLPAGTAIT 401

Query: 450 NIACGWWHTLLLAE 463
            +A G  H+L L +
Sbjct: 402 AVAVGDDHSLALVD 415



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 9/167 (5%)

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           +AV TD   +L +G   +GQ G+G+T     P      +   V  IA    H++ ++  G
Sbjct: 50  AAVATDT--ILAWGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVG 107

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            V  +GGN FGQLG G   +   P  +  P+  +  A  ++ G  HS  +T  G V +WG
Sbjct: 108 TVLAWGGNSFGQLGDGTTASSRTPVPVRLPVGTTVTA--IAAGTSHSLAITATGAVFAWG 165

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIH---GFLPRNIACGWWHTLLLAET 464
            N  GQLG G + D ++P  VP+    G     IA G  H+L +A T
Sbjct: 166 DNAVGQLGDGTTTDSSLP--VPVRLPVGTTVTAIAGGLGHSLAVAST 210



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 142/381 (37%), Gaps = 51/381 (13%)

Query: 40  SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           +P+P RL  G +   + G     +LA +  G ++ WG  +  GQ    +     TP P  
Sbjct: 78  TPVPVRLPVGTTVTAIAGSDT-HSLALTSVGTVLAWG-GNSFGQLGDGTTASSRTPVPVR 135

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           LP   +V   AAG +H +++T  G V+ WG              G  G    D T   S+
Sbjct: 136 LPVGTTVTAIAAGTSHSLAITATGAVFAWGDNA----------VGQLG----DGTTTDSS 181

Query: 160 LPTEQAPPSDKR----AG----EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           LP     P        AG       V     + A   +     GD   T S   +T+   
Sbjct: 182 LPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTTGSSTPITVPQL 241

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
             +T VAAG  H+L L+  G V+ WG    GQLG GS                  S    
Sbjct: 242 PTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGST-----------------SDSST 284

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P+ VR         AG +    +  G  HS  +T AG  L +G    GQ G+G+T     
Sbjct: 285 PIAVRV-------PAG-TTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGSST 336

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P          +  +A    H V ++       +  N  GQLG G     + P  +  P 
Sbjct: 337 PVAVRVPGGATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNGTTTDSSEPVAVSLPA 396

Query: 392 LESKRAKVVSCGARHSAVLTE 412
             +  A  V+ G  HS  L +
Sbjct: 397 GTAITA--VAVGDDHSLALVD 415


>gi|332801056|ref|NP_001095381.2| protein RCC2 [Bos taurus]
 gi|151554348|gb|AAI47876.1| RCC2 protein [Bos taurus]
          Length = 520

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 127/282 (45%), Gaps = 54/282 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P L+  L H    
Sbjct: 145 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLVEGLSH---- 199

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 200 --------------------EVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 239

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 240 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 298

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 299 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 358

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAET 464
           +LG  +  D  +P LV +  F  R    I  G+  +  ++E 
Sbjct: 359 RLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEV 400



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 122/307 (39%), Gaps = 56/307 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P LV       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 174 RNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 233

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 234 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 268

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 269 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 328

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 329 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 388

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLL 460
            G   S  ++E G +  WG     +           P  V  + G+  R++ACG    ++
Sbjct: 389 AGYTCSFAVSEVGGLFFWGATNTSREST------MYPKAVQDLCGWRIRSLACGKSSIIV 442

Query: 461 LAETTQI 467
            A+ + I
Sbjct: 443 AADESTI 449



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           SC A HS ++T +G++ SWG N+ GQLG GD+     P LV  +   +  + ACG  HTL
Sbjct: 155 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTL 213

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 214 ALTETGSV 221


>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 715

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 187/490 (38%), Gaps = 108/490 (22%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
           GG    LA  + G +  W S  +     L +G   ++  P  +     V+  AAG+ H +
Sbjct: 3   GGAHHTLAVRQDGTV--WASGYNY-HGELGNGTATDSLSPVQVSNLTGVISVAAGYYHSL 59

Query: 118 SVTEAGEVYTWGWRE--------CVPSAKVTRDFGSAGSFQKDSTGKQS-ALPTEQAPPS 168
           ++   G V+ WG                K  +     G     +   QS AL ++    S
Sbjct: 60  ALKSDGTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLTGVIAIAADYYQSFALKSDGTVWS 119

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFF--TLSPCLVTLNPGVKITKVAAGGRHTLI 226
               G   +     ++ +     PA   + F   LSP          +  +AAG  HTL 
Sbjct: 120 WGYNGNSALGNASPATQKL----PAQVQQSFGGILSPL-------TDVVAIAAGTHHTLA 168

Query: 227 LSDMGQVWGWGYGGEGQLG---LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS- 282
           L   G VW WG    GQLG   L ++   V   +L   +  +A       L   G+V S 
Sbjct: 169 LKSNGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTDAVAISAGAAHSLALRANGAVVSW 228

Query: 283 -------------------SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
                               G +G + +K +A GG HS  +   G +  +G+  YGQ G+
Sbjct: 229 GANTYGQLGNGTTTTSASPVGVSGLNNIKSLAAGGNHSLALKSDGTVTAWGYNAYGQVGN 288

Query: 324 GSTNDQLRPSYASSLMDIQ----------------------------------------- 342
           G+T + L P   S+L  +                                          
Sbjct: 289 GATANVLSPIAVSTLSGVTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGNNTKVNRSTP 348

Query: 343 --------VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
                   ++ +A G  HT+ +  +G V+ +G N +GQ+G G       P    TP+  S
Sbjct: 349 GTILLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDG------TPLRRLTPVQLS 402

Query: 395 KRAKV--VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNI 451
               +  V+ GA HS  L  +G V +WG N +GQLG G + +R++P+ VP + G +   +
Sbjct: 403 TLTGIIAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQVPNLTGIVA--L 460

Query: 452 ACGWWHTLLL 461
           A G  H+L L
Sbjct: 461 AAGATHSLAL 470



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 143/358 (39%), Gaps = 52/358 (14%)

Query: 97  PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
           P  L T   ++  AAG  H +++   G V+ WG            + G  G     +   
Sbjct: 398 PVQLSTLTGIIAVAAGANHSLALAANGTVFAWG----------RNNHGQLGDGSTTNRSL 447

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--GDEFFT--LSPCLVTLNPGV 212
            + +P      +        +  R   +      N     GDE  T  LSP  V      
Sbjct: 448 PTQVPNLTGIVALAAGATHSLALRFDGTVYAWGRNHLGQLGDETCTDRLSPVAVHYLE-- 505

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           K+  ++AG  H+L +   G  + WG    GQL                C   + SG+  P
Sbjct: 506 KVVAISAGDNHSLAIHQNGTAFAWGSDEHGQL----------------CDSGSGSGRFSP 549

Query: 273 LLVR-QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           L+ +  G V   G         IA G  H+ ++   G     G  LYGQ G G+T D+  
Sbjct: 550 LISQIPGIVKGIG---------IAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSA 600

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLET- 389
           P   ++L +    ++AAG   +  ++  G V  +G N  GQLG     +   +  +L T 
Sbjct: 601 PVPITTLTN--AARLAAGGNTSAALTTNGTVSTWGLNSSGQLGDNTTASRTTIAPVLRTV 658

Query: 390 -PILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS--LVP 442
            P +E   + V S GA   H   +  DG V SWG N  GQ+G G  ++R +P+  L+P
Sbjct: 659 YPTVE-VFSGVASLGAGTAHLTAVKTDGYVHSWGLNDSGQIGDGTLVNRPLPTAALLP 715


>gi|348686412|gb|EGZ26227.1| hypothetical protein PHYSODRAFT_486876 [Phytophthora sojae]
          Length = 289

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 95/187 (50%), Gaps = 26/187 (13%)

Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
           ++   S  E     P +V     V+I +VAAGG H+L L   G VW WG    GQLG+ S
Sbjct: 108 AQAAVSAGEDVVRVPTVVEFPTPVQIVQVAAGGMHSLALDSSGGVWAWGCNEFGQLGINS 167

Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
            ++   +P  +     A S + R                   V++IA G  HSA+V+ +G
Sbjct: 168 EVETQHSPRRV-----ALSAEIR-------------------VRDIAAGWAHSALVSTSG 203

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSL--MDIQVEQIAAGLWHTVCISVEGRVYVFG 366
            + TFGWGLY Q GHGST +++ P    +L  +D +  Q+A G WHT  ++  G +Y +G
Sbjct: 204 EVFTFGWGLYNQLGHGSTQNEVEPVVVDALQGVDSEAVQVACGNWHTAALTASGDLYTWG 263

Query: 367 GNQFGQL 373
             + GQL
Sbjct: 264 WGKDGQL 270



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 100/226 (44%), Gaps = 29/226 (12%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQV--WGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           +VTL    + + VA G  H L L+D G+V  WGW    +  +  G  +  VPT    P  
Sbjct: 71  VVTLQVSERCSAVACGSNHVLALTDSGRVVAWGWNASAQAAVSAGEDVVRVPTVVEFP-- 128

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                    P+ + Q                +A GG HS  +  +G +  +G   +GQ G
Sbjct: 129 --------TPVQIVQ----------------VAAGGMHSLALDSSGGVWAWGCNEFGQLG 164

Query: 323 HGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
             S    Q  P   +   +I+V  IAAG  H+  +S  G V+ FG   + QLG G  Q E
Sbjct: 165 INSEVETQHSPRRVALSAEIRVRDIAAGWAHSALVSTSGEVFTFGWGLYNQLGHGSTQNE 224

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
             P +++        A  V+CG  H+A LT  G + +WGW K GQL
Sbjct: 225 VEPVVVDALQGVDSEAVQVACGNWHTAALTASGDLYTWGWGKDGQL 270



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 36/258 (13%)

Query: 210 PGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           P +    V  G   T+ +++D G+V GWG    G+L                    A S 
Sbjct: 26  PDLAFVAVDGGDTFTVGVVADSGEVVGWGRAFYGEL-------------------PADSA 66

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             + ++  Q S   S          +ACG  H   +TD+G ++ +GW    Q    +  D
Sbjct: 67  VGKGVVTLQVSERCSA---------VACGSNHVLALTDSGRVVAWGWNASAQAAVSAGED 117

Query: 329 QLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKL 386
            +R P+       +Q+ Q+AAG  H++ +   G V+ +G N+FGQLG   + + ++ P+ 
Sbjct: 118 VVRVPTVVEFPTPVQIVQVAAGGMHSLALDSSGGVWAWGCNEFGQLGINSEVETQHSPR- 176

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHG 445
               +    R + ++ G  HSA+++  G+V ++GW  Y QLG G + +   P +V  + G
Sbjct: 177 -RVALSAEIRVRDIAAGWAHSALVSTSGEVFTFGWGLYNQLGHGSTQNEVEPVVVDALQG 235

Query: 446 FLPR--NIACGWWHTLLL 461
                  +ACG WHT  L
Sbjct: 236 VDSEAVQVACGNWHTAAL 253



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 41/222 (18%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCV 117
           G    LA ++SG+++ WG  +   Q+ +++G+     P     PT   +V+ AAG  H +
Sbjct: 86  GSNHVLALTDSGRVVAWGW-NASAQAAVSAGEDVVRVPTVVEFPTPVQIVQVAAGGMHSL 144

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
           ++  +G V+ WG  E          FG          G  S + T+ +P     + E  +
Sbjct: 145 ALDSSGGVWAWGCNE----------FGQ--------LGINSEVETQHSPRRVALSAE--I 184

Query: 178 KRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV--KITKVA 218
           + R  ++    S   ++  E FT                   P +V    GV  +  +VA
Sbjct: 185 RVRDIAAGWAHSALVSTSGEVFTFGWGLYNQLGHGSTQNEVEPVVVDALQGVDSEAVQVA 244

Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
            G  HT  L+  G ++ WG+G +GQL    R + +    LIP
Sbjct: 245 CGNWHTAALTASGDLYTWGWGKDGQLVRPWRPRHLHVRALIP 286


>gi|308799553|ref|XP_003074557.1| protein kinase, putative (ISS) [Ostreococcus tauri]
 gi|116000728|emb|CAL50408.1| protein kinase, putative (ISS) [Ostreococcus tauri]
          Length = 1813

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 148/361 (40%), Gaps = 70/361 (19%)

Query: 96  EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
           +P  + + A + K AAG  H V++TE+G+VYTWG            D G  G        
Sbjct: 297 QPVRIGSLALITKLAAGAFHVVAMTESGKVYTWG----------ADDLGQLGR------- 339

Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
                     P   +    E  K+ K+  AR  +                     GV   
Sbjct: 340 -------GWMPGMLQSIKSEAFKKSKSLPARVVNNG-----------------FRGVVTV 375

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG--KDRPL 273
            +A+G  HTL L+  G +W WG   EGQLGL           L  C E A      D P 
Sbjct: 376 DIASGEFHTLALTSSGDIWAWGSNIEGQLGLKPCEISKYGNGLGECRESAPEMPYTDSPQ 435

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA-------GALLTFGWGLYGQCG---- 322
           +V  G+              IA G R+S  +T A       G +  +G+G  GQ G    
Sbjct: 436 IVAVGA--------NVKFAAIAAGARYSMALTAADETGAGGGRVFAWGYGENGQLGLVLD 487

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
             +    L P   ++L D  +  IAAG  H   I+  G +Y +G N FGQLG G      
Sbjct: 488 GRNVERALVPQPLTTLGDEVIVFIAAGESHVAAIASTGELYTWGSNTFGQLGHGDRVDRG 547

Query: 383 VPKLLETPILESKRAKV--VSCGARHSAVLTEDGQVLSWGWNKYGQLGL----GDSIDRN 436
            P  ++  IL     K+  VSCG  H+  +++ G+V +WG N+YGQLG      D  +RN
Sbjct: 548 KPTKVQ--ILSDANIKIHSVSCGRSHTVAVSDYGEVFTWGSNEYGQLGTEPRPADDTERN 605

Query: 437 I 437
           +
Sbjct: 606 M 606



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 167/400 (41%), Gaps = 98/400 (24%)

Query: 22  VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
           V+ WGY       L   +P  S I +  P R+ G  +       G    +A +ESGK+ T
Sbjct: 271 VWGWGYDARRVLGLETVTPSASTIAAQ-PVRI-GSLALITKLAAGAFHVVAMTESGKVYT 328

Query: 75  WGSADDEGQ-------SYLTSGKHGETPEPFPLPTEAS--------VVKAAAGWAHCVSV 119
           WG ADD GQ         L S K     +   LP             V  A+G  H +++
Sbjct: 329 WG-ADDLGQLGRGWMPGMLQSIKSEAFKKSKSLPARVVNNGFRGVVTVDIASGEFHTLAL 387

Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
           T +G+++ WG                      +  G+    P E +     + G  + + 
Sbjct: 388 TSSGDIWAWG---------------------SNIEGQLGLKPCEIS-----KYGNGLGEC 421

Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM-------GQ 232
           R+++      E P      +T SP +V +   VK   +AAG R+++ L+         G+
Sbjct: 422 RESAP-----EMP------YTDSPQIVAVGANVKFAAIAAGARYSMALTAADETGAGGGR 470

Query: 233 VWGWGYGGEGQLGL---GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
           V+ WGYG  GQLGL   G  ++      L+P          +PL             G  
Sbjct: 471 VFAWGYGENGQLGLVLDGRNVERA----LVP----------QPLTTL----------GDE 506

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD--IQVEQIA 347
            +  IA G  H A +   G L T+G   +GQ GHG   D+ +P+    L D  I++  ++
Sbjct: 507 VIVFIAAGESHVAAIASTGELYTWGSNTFGQLGHGDRVDRGKPTKVQILSDANIKIHSVS 566

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
            G  HTV +S  G V+ +G N++GQLGT    A++  + +
Sbjct: 567 CGRSHTVAVSDYGEVFTWGSNEYGQLGTEPRPADDTERNM 606



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 41/285 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           ITK+AAG  H + +++ G+V+ WG    GQLG G        P ++  ++  A  K + L
Sbjct: 307 ITKLAAGAFHVVAMTESGKVYTWGADDLGQLGRGWM------PGMLQSIKSEAFKKSKSL 360

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG--------HGS 325
             R   V ++G  G   V +IA G  H+  +T +G +  +G  + GQ G        +G+
Sbjct: 361 PAR---VVNNGFRGVVTV-DIASGEFHTLALTSSGDIWAWGSNIEGQLGLKPCEISKYGN 416

Query: 326 TNDQLR-----------PSYASSLMDIQVEQIAAGLWHTVCISVE-------GRVYVFGG 367
              + R           P   +   +++   IAAG  +++ ++         GRV+ +G 
Sbjct: 417 GLGECRESAPEMPYTDSPQIVAVGANVKFAAIAAGARYSMALTAADETGAGGGRVFAWGY 476

Query: 368 NQFGQLGTGVDQAENVPKLLETPI--LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
            + GQLG  +D       L+  P+  L  +    ++ G  H A +   G++ +WG N +G
Sbjct: 477 GENGQLGLVLDGRNVERALVPQPLTTLGDEVIVFIAAGESHVAAIASTGELYTWGSNTFG 536

Query: 426 QLGLGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLLLAETTQI 467
           QLG GD +DR  P+ V I         +++CG  HT+ +++  ++
Sbjct: 537 QLGHGDRVDRGKPTKVQILSDANIKIHSVSCGRSHTVAVSDYGEV 581



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 67/259 (25%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           I  + G VWGWGY     LGL +      T    P              VR GS+     
Sbjct: 264 IEHESGYVWGWGYDARRVLGLETVTPSASTIAAQP--------------VRIGSL----- 304

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD----- 340
              + + ++A G  H   +T++G + T+G    GQ G G     L+   + +        
Sbjct: 305 ---ALITKLAAGAFHVVAMTESGKVYTWGADDLGQLGRGWMPGMLQSIKSEAFKKSKSLP 361

Query: 341 ----------IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL----------GTGVDQA 380
                     +    IA+G +HT+ ++  G ++ +G N  GQL          G G+ + 
Sbjct: 362 ARVVNNGFRGVVTVDIASGEFHTLALTSSGDIWAWGSNIEGQLGLKPCEISKYGNGLGEC 421

Query: 381 -ENVPKL--LETPILESKRAKV----VSCGARHSAVLTED-------GQVLSWGWNKYGQ 426
            E+ P++   ++P + +  A V    ++ GAR+S  LT         G+V +WG+ + GQ
Sbjct: 422 RESAPEMPYTDSPQIVAVGANVKFAAIAAGARYSMALTAADETGAGGGRVFAWGYGENGQ 481

Query: 427 LGL---GDSIDRNIPSLVP 442
           LGL   G +++R   +LVP
Sbjct: 482 LGLVLDGRNVER---ALVP 497


>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 560

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 156/399 (39%), Gaps = 46/399 (11%)

Query: 73  ITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
           + WG   D     L  G   ++  P    LP   +V   AAG AH ++VT AG +  WG 
Sbjct: 59  LAWG---DNASGQLGDGSTADSSMPVAVSLPAGVTVTTVAAGAAHNLAVTSAGTILAWGD 115

Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
                    +   G  G+     T     LPT     +        +      +      
Sbjct: 116 NS-------SGQLGD-GTTSNRHTPVAVGLPTGVTVTAVAAGAAHSLALTSAGTVLAWGA 167

Query: 191 NP----ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
           N       G    + +P  V L PGV  T VAAG  H+L ++  G V  WG    GQLG 
Sbjct: 168 NTIGQLGDGTTIDSPAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQLGE 227

Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
           G+ I     P   P +    SG                         +A G  HS  VT 
Sbjct: 228 GTTI-----PSRTPVVVSLPSGV--------------------TATAVAGGDLHSLAVTS 262

Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           AGA+L +G    GQ G G+T D+  P   S      V  +AAG+  ++ +S  G V  +G
Sbjct: 263 AGAVLAWGSNSSGQLGDGTTADRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWG 322

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N  GQLG G     + P  + +P         ++ G  H   +T  G  ++WG N +GQ
Sbjct: 323 SNSSGQLGDGTTADRSTPVTVSSP--AGTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQ 380

Query: 427 LGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAE 463
           LG G + DR  P  V  P+       IA G  H++ +A 
Sbjct: 381 LGDGTNTDRVTPVAVSLPVGTTTLTAIAAGAAHSVAVAA 419



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 149/382 (39%), Gaps = 56/382 (14%)

Query: 41  PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPF 98
           P+   L  G +   V  G     LA + +G ++ WG  +  GQ     TS +H  TP   
Sbjct: 80  PVAVSLPAGVTVTTVAAGAA-HNLAVTSAGTILAWGD-NSSGQLGDGTTSNRH--TPVAV 135

Query: 99  PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
            LPT  +V   AAG AH +++T AG V  WG              G  G    D T   S
Sbjct: 136 GLPTGVTVTAVAAGAAHSLALTSAGTVLAWGANT----------IGQLG----DGTTIDS 181

Query: 159 ALPTE-QAPPSDKRAGEEVVKRRK---TSSAR------EESENPASGDEFFTLSPCLVTL 208
             P +   PP                 TS+          S     G    + +P +V+L
Sbjct: 182 PAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQLGEGTTIPSRTPVVVSL 241

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
             GV  T VA G  H+L ++  G V  WG    GQLG G+                    
Sbjct: 242 PSGVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQLGDGTTAD----------------- 284

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
           +  P+ V          +G + V  +A G   S  ++ AGA+L +G    GQ G G+T D
Sbjct: 285 RSTPVAVS--------LSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQLGDGTTAD 336

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           +  P   SS     V  IA G  H + ++  G    +G N FGQLG G +     P  + 
Sbjct: 337 RSTPVTVSSPAGTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTNTDRVTPVAVS 396

Query: 389 TPILESKRAKVVSCGARHSAVL 410
            P+  +     ++ GA HS  +
Sbjct: 397 LPV-GTTTLTAIAAGAAHSVAV 417



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 64/138 (46%), Gaps = 4/138 (2%)

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           SAV  D    L +G    GQ G GST D   P   S    + V  +AAG  H + ++  G
Sbjct: 51  SAVAADTA--LAWGDNASGQLGDGSTADSSMPVAVSLPAGVTVTTVAAGAAHNLAVTSAG 108

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            +  +G N  GQLG G     + P  +  P         V+ GA HS  LT  G VL+WG
Sbjct: 109 TILAWGDNSSGQLGDGTTSNRHTPVAVGLP--TGVTVTAVAAGAAHSLALTSAGTVLAWG 166

Query: 421 WNKYGQLGLGDSIDRNIP 438
            N  GQLG G +ID   P
Sbjct: 167 ANTIGQLGDGTTIDSPAP 184



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 5/100 (5%)

Query: 30  GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
           GT+ ++S   +P+   L GG +   V  G   F+LA S +G ++ WGS +  GQ    + 
Sbjct: 280 GTTADRS---TPVAVSLSGGTTVTAVAAG-IAFSLALSSAGAVLAWGS-NSSGQLGDGTT 334

Query: 90  KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
               TP     P   +V   A G AH ++VT  G    WG
Sbjct: 335 ADRSTPVTVSSPAGTTVTAIAGGDAHGLAVTSVGAAIAWG 374



 Score = 41.6 bits (96), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 81/223 (36%), Gaps = 62/223 (27%)

Query: 31  TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
           T P ++P++  +P+    G +   V GG    +LA + +G ++ WGS +  GQ    +  
Sbjct: 230 TIPSRTPVVVSLPS----GVTATAVAGGDL-HSLAVTSAGAVLAWGS-NSSGQLGDGTTA 283

Query: 91  HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
              TP    L    +V   AAG A  ++++ AG V  WG                     
Sbjct: 284 DRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWG--------------------- 322

Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
            +S+G+                G+     R T                    P  V+   
Sbjct: 323 SNSSGQL---------------GDGTTADRST--------------------PVTVSSPA 347

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           G  +T +A G  H L ++ +G    WG    GQLG G+    V
Sbjct: 348 GTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTNTDRV 390


>gi|355715935|gb|AES05448.1| regulator of chromosome condensation 2 [Mustela putorius furo]
          Length = 426

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 78  GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPKLIEGLSHEV-- 134

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++L FG    GQ G G+  D
Sbjct: 135 ----------------------IVSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQTD 172

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 173 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 231

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 232 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 291

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 292 RLGHAEQKDEMVPRLVKLFDF 312



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 121/307 (39%), Gaps = 56/307 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V  +G    GQLG
Sbjct: 107 RNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQLG 166

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 167 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 201

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 202 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 261

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 262 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 321

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLL 460
            G   S  ++E G +  WG     +           P  V  + G+  R++ACG    ++
Sbjct: 322 AGYTCSFAVSEVGGLFFWGATNTSRE------STMYPKAVQDLCGWRIRSLACGKSSIIV 375

Query: 461 LAETTQI 467
            A+ + I
Sbjct: 376 AADESTI 382



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 392 LESKRAKVVSCG--ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
           L   R + V  G  A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   + 
Sbjct: 76  LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVI 135

Query: 449 RNIACGWWHTLLLAETTQI 467
            + ACG  HTL L ET  +
Sbjct: 136 VSAACGRNHTLALTETGSV 154



 Score = 45.1 bits (105), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 73/197 (37%), Gaps = 29/197 (14%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P V +  VA G  HTL+L    +V+ WG+GG G+LG   + K    P L+   +    G 
Sbjct: 259 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDFPGRG- 316

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                                  +I  G   S  V++ G L  F WG      + S    
Sbjct: 317 ---------------------ASQIYAGYTCSFAVSEVGGL--FFWG----ATNTSREST 349

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           + P     L   ++  +A G    +  + E  +       FG+LG G  + ++     E 
Sbjct: 350 MYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEV 409

Query: 390 PILESKRAKVVSCGARH 406
             L+    + V+ G  H
Sbjct: 410 KTLDGIFTEQVAMGYAH 426


>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
          Length = 1126

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 113/231 (48%), Gaps = 30/231 (12%)

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
           LN   K  +VA G  H+L L+  G ++ WG    GQLG G++           CL     
Sbjct: 67  LNLKQKFVQVACGATHSLALTISGIIFSWGKNLRGQLGHGNQN---------DCL----- 112

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
              +P  V Q  +           + I CG +HSA V+    L T+G G Y + GHG T 
Sbjct: 113 ---KPKEVIQNDI---------IAEYIDCGDQHSAFVSKNKELYTWGNGQYYRLGHGVTT 160

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPK- 385
           D+L P     L D  V  ++ G+ HT+ ++ EG VY +G   +G+LG   D + + +P  
Sbjct: 161 DELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTR 220

Query: 386 --LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
             ++     ++K    V+ G+ HS  L+ +GQ+ +WG +K G LG+G + D
Sbjct: 221 VGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTWGSSKSGNLGIGYNKD 271



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 92/171 (53%), Gaps = 8/171 (4%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           IACG  H+ ++ +   L +FG G  G  G+    D   P   +  +  +  Q+A G  H+
Sbjct: 26  IACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLN--LKQKFVQVACGATHS 83

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPK-LLETPILESKRAKVVSCGARHSAVLTE 412
           + +++ G ++ +G N  GQLG G       PK +++  I+    A+ + CG +HSA +++
Sbjct: 84  LALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQNDII----AEYIDCGDQHSAFVSK 139

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLA 462
           + ++ +WG  +Y +LG G + D  IP  +V +  +   +++CG  HTL++ 
Sbjct: 140 NKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVT 190



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 4/130 (3%)

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           L D ++  IA G  HT+ I    ++Y FG  + G LG    +   +P+ L    L+ K  
Sbjct: 18  LQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLN---LKQKFV 74

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWH 457
           +V +CGA HS  LT  G + SWG N  GQLG G+  D   P  V  +  +   I CG  H
Sbjct: 75  QV-ACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQNDIIAEYIDCGDQH 133

Query: 458 TLLLAETTQI 467
           +  +++  ++
Sbjct: 134 SAFVSKNKEL 143



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 122/318 (38%), Gaps = 53/318 (16%)

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
           K     +V ++    A+ ++ N    D      P  +       I  ++    H + +S 
Sbjct: 386 KLNQNSIVSKKLKQQAKTKNTNEIDTDLNDFNRPFQIQYFKNNIIRYISCSYLHAIAISQ 445

Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
            GQ + WG     QLG+G             C  +    K + +L  +  + S       
Sbjct: 446 KGQAYVWGKNIYYQLGVGY-----------SCNYNYIPQKLQGILETKTIIMS------- 487

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI-QVEQIAA 348
                AC  + SA++TD G + TFG    G  GH   N  + P     + DI Q+  IA 
Sbjct: 488 -----ACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPE-PKMVNDIPQMIYIAC 541

Query: 349 GLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAE-NVPKLLE------------TPILES 394
           G    V IS   R +Y +G N +GQLG  + + E NV +  E             P  E 
Sbjct: 542 GPQGMVSISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKP--EE 599

Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKY-GQL---------GLGDSIDRNIPSLVPIH 444
            + K V  G  HS  +  +G++ S G   Y GQ          G+ D       + +   
Sbjct: 600 VQIKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDAKGIDDQFILIRTNELQNQ 659

Query: 445 GFLPRNIACGWWHTLLLA 462
            F+   ++C  +HTL L+
Sbjct: 660 QFIQ--VSCSEYHTLALS 675



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 111/284 (39%), Gaps = 41/284 (14%)

Query: 53  KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPLPTEASVVKA 109
           K++    CG    L   E+ +L ++G     G++ L   +H E  + P  L  +   V+ 
Sbjct: 21  KEIIYIACGHHHTLIIDENNQLYSFGM----GKTGLLGNEHLEDVKIPQQLNLKQKFVQV 76

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           A G  H +++T +G +++WG      + +     G+     K     Q+ +  E     D
Sbjct: 77  ACGATHSLALTISGIIFSWG-----KNLRGQLGHGNQNDCLKPKEVIQNDIIAEYIDCGD 131

Query: 170 KRAGEEVVKRRKT-----SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
           + +    V + K      +       +  + DE   L P  V +     +T V+ G  HT
Sbjct: 132 QHSA--FVSKNKELYTWGNGQYYRLGHGVTTDE---LIPKKVVVLEDYYVTHVSCGMNHT 186

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
           LI++  G V+ WG G  G+LG+    K    P                   R G +    
Sbjct: 187 LIVTGEGFVYAWGDGMYGKLGVSEDCKTQTLP------------------TRVGMICKKF 228

Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
           +  + Y  ++A G  HS  ++  G + T+G    G  G G   D
Sbjct: 229 RKNKMYY-QVAAGSMHSLALSTNGQIFTWGSSKSGNLGIGYNKD 271


>gi|326435042|gb|EGD80612.1| NEK/NEK8 protein kinase [Salpingoeca sp. ATCC 50818]
          Length = 1613

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 108/223 (48%), Gaps = 29/223 (13%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           K+T+V  G  H L L    Q++ WG    G+LGLG       TP   P  E  A+  DR 
Sbjct: 458 KVTQVVCGMEHCLALDMEHQIYAWGQNSWGELGLGDT-----TPRAHP--ERVAALGDR- 509

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                G+V             IA GG+ SA +T +G LLT G    G  GHG+T+  +RP
Sbjct: 510 -----GTV------------AIAAGGQCSAFLTHSGMLLTCGRSDTGALGHGTTSTCMRP 552

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN--VPKLLETP 390
                L+  +V+ +A G  H   I+ + RVY +G N  GQLG    Q     VP+ ++ P
Sbjct: 553 KLVEKLLSQEVKSVAVGEHHMAAITDDARVYTWGANDCGQLGHSRTQQPTSLVPRQVDLP 612

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
             E  + + V CG   S +L E G++L+ G NK  +LG+  + 
Sbjct: 613 --EVMKPRRVFCGPNASMILMEGGRLLAAGCNKNNKLGINSTF 653



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 105/292 (35%), Gaps = 57/292 (19%)

Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWR--------ECVPSAKVTR--DFGSAGSFQKDSTG 155
           V +   G  HC+++    ++Y WG          +  P A   R    G  G+    + G
Sbjct: 459 VTQVVCGMEHCLALDMEHQIYAWGQNSWGELGLGDTTPRAHPERVAALGDRGTVAIAAGG 518

Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
           + SA  T                    +  R ++     G     + P LV      ++ 
Sbjct: 519 QCSAFLTHSG--------------MLLTCGRSDTGALGHGTTSTCMRPKLVEKLLSQEVK 564

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            VA G  H   ++D  +V+ WG    GQLG                  H+ + +   L+ 
Sbjct: 565 SVAVGEHHMAAITDDARVYTWGANDCGQLG------------------HSRTQQPTSLVP 606

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY- 334
           RQ  +    K  R +     CG   S ++ + G LL  G     + G  ST    R +  
Sbjct: 607 RQVDLPEVMKPRRVF-----CGPNASMILMEGGRLLAAGCNKNNKLGINSTFGIFRRTTI 661

Query: 335 ----ASSLMDI-----QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
               A +L++      +   +A G  +T  ++  G+ Y  G N+ G+LG G 
Sbjct: 662 DQADAFTLVNSITGRGKAVHVALGESNTCVVTETGKCYTMGSNKQGELGNGT 713



 Score = 42.4 bits (98), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%)

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           S++   V CG  H   L  + Q+ +WG N +G+LGLGD+  R  P  V
Sbjct: 456 SRKVTQVVCGMEHCLALDMEHQIYAWGQNSWGELGLGDTTPRAHPERV 503


>gi|359319092|ref|XP_544537.3| PREDICTED: protein RCC2 [Canis lupus familiaris]
          Length = 460

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 85  GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPKLIEGLSHEV-- 141

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++L FG    GQ G G+  D
Sbjct: 142 ----------------------IVSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQTD 179

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 180 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 238

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 239 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 298

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 299 RLGHAEQKDEMVPRLVKLFDF 319



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 103/259 (39%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V  +G    GQLG
Sbjct: 114 RNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQLG 173

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 174 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 208

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 209 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 268

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 269 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 328

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 329 AGYTCSFAVSEVGGLFFWG 347



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 77/204 (37%), Gaps = 29/204 (14%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P V +  VA G  HTL+L    +V+ WG+GG G+LG   + K    P L+   +    G 
Sbjct: 266 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDFPGRG- 323

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                                  +I  G   S  V++ G L  F WG      + S    
Sbjct: 324 ---------------------ASQIYAGYTCSFAVSEVGGL--FFWG----ATNTSREST 356

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           + P     L   ++  +A G    +  + E  +       FG+LG G  + ++     E 
Sbjct: 357 MYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEV 416

Query: 390 PILESKRAKVVSCGARHSAVLTED 413
             L+    + V+ G  HS V+  D
Sbjct: 417 KTLDGIFTEQVAMGYAHSLVIARD 440



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 392 LESKRAKVVSCG--ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
           L   R + V  G  A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   + 
Sbjct: 83  LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVI 142

Query: 449 RNIACGWWHTLLLAETTQI 467
            + ACG  HTL L ET  +
Sbjct: 143 VSAACGRNHTLALTETGSV 161


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 120/248 (48%), Gaps = 31/248 (12%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ +T+VA G +HT++LS  GQV+ WG    GQLGLG               +   S   
Sbjct: 121 GITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLG---------------KEGCSSIS 165

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTND 328
            P  VR  S           V +++ GG HS  ++ +G++  FGWG    GQ G G T D
Sbjct: 166 SPQCVRSLSSMP--------VVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTD 215

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           +  P+    L   +    A G  HT  ++++G V+ FG   +GQLG    +    P+L+ 
Sbjct: 216 RETPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVA 275

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGF 446
              L   +   ++CG  H+ VLT+  +V S+G N++GQLG  +     +P  V  P  G 
Sbjct: 276 E--LWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQLPREGP 333

Query: 447 LPRNIACG 454
           + +NI  G
Sbjct: 334 IIQNIFAG 341



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 92/189 (48%), Gaps = 25/189 (13%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP  V     + + +V+AGG H+  LS  G V+GWG    GQLGLG              
Sbjct: 166 SPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGD------------- 212

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                + ++ P LV   ++  +  A        ACG  H+AV+T  G + TFG G YGQ 
Sbjct: 213 ----TTDRETPTLVHYLNMKKTVFA--------ACGKDHTAVLTMDGTVFTFGSGHYGQL 260

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           GH S  + L P   + L   +V +IA G +HT+ ++   +VY FG N+ GQLG   +   
Sbjct: 261 GHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHP 320

Query: 382 NVPKLLETP 390
            VP  ++ P
Sbjct: 321 CVPLPVQLP 329



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 93/180 (51%), Gaps = 5/180 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST--NDQLRPSYASSLMDIQVEQIAA 348
           V ++ACG +H+ V++  G + T+G    GQ G G    +    P    SL  + V Q++A
Sbjct: 124 VTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSA 183

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G  H+  +SV G V+ +G N  GQLG G       P L+    L  K+    +CG  H+A
Sbjct: 184 GGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVH--YLNMKKTVFAACGKDHTA 241

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           VLT DG V ++G   YGQLG     +   P LV  + G     IACG +HTL+L +  ++
Sbjct: 242 VLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMKV 301



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 92/193 (47%), Gaps = 18/193 (9%)

Query: 279 SVNSSGKAGRSYVKEIACGGRHSAV-VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
           S +++G   +   K + C  R +AV  TD G  L    G+       S +    P    +
Sbjct: 61  SESAAGTREKRKQKFVECEERLAAVGCTDDGVTLLSDTGVVFCVD--SPHPPFTPRSLEA 118

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG------VDQAENVPKLLETPI 391
           L  I V Q+A G  HTV +S +G+VY +G N  GQLG G      +   + V  L   P+
Sbjct: 119 LSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPV 178

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
           ++      VS G  HS  L+  G V  WG N  GQLGLGD+ DR  P+LV     + + +
Sbjct: 179 VQ------VSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLN-MKKTV 231

Query: 452 --ACGWWHTLLLA 462
             ACG  HT +L 
Sbjct: 232 FAACGKDHTAVLT 244



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 114/286 (39%), Gaps = 52/286 (18%)

Query: 5   GSKREENEKMEECKETVVYMWGYLPGTSPEKSPILS-------------PIPARLCGGDS 51
           G++ +  +K  EC+E +  +     G + +   +LS             P   R     S
Sbjct: 66  GTREKRKQKFVECEERLAAV-----GCTDDGVTLLSDTGVVFCVDSPHPPFTPRSLEALS 120

Query: 52  WKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEAS 105
              V    CG    +  S+ G++ TWG  +  GQ  L  GK G     +P+     +   
Sbjct: 121 GITVTQVACGSQHTVVLSKDGQVYTWGQ-NSRGQ--LGLGKEGCSSISSPQCVRSLSSMP 177

Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           VV+ +AG  H  +++ +G V+ WG  +C          G  G    D+T +++  PT   
Sbjct: 178 VVQVSAGGDHSFALSVSGSVFGWGRNDC----------GQLG--LGDTTDRET--PTLVH 223

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKIT 215
             + K+       +  T+    +      G   +           L P LV    G K+T
Sbjct: 224 YLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVT 283

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIP 260
           K+A G  HTL+L+D  +V+ +G    GQLG        VP P  +P
Sbjct: 284 KIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQLP 329



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 86/232 (37%), Gaps = 33/232 (14%)

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
           TP      +  +V + A G  H V +++ G+VYTWG      +++     G  G     S
Sbjct: 112 TPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWG-----QNSRGQLGLGKEGCSSISS 166

Query: 154 ---TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
                  S++P  Q       +    V        R +      GD     +P LV    
Sbjct: 167 PQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLN 226

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
             K    A G  HT +L+  G V+ +G G  GQLG  S  +    P L+  L  A     
Sbjct: 227 MKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNS-FRNALCPRLVAELWGAK---- 281

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                               V +IACG  H+ V+TD   + +FG   +GQ G
Sbjct: 282 --------------------VTKIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313


>gi|148753311|gb|AAI42947.1| RCC2 protein [Homo sapiens]
          Length = 457

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 82  GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 138

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 139 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 176

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 177 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 235

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 236 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 295

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 296 RLGHAEQKDEMVPRLVKLFDF 316



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 111 RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 170

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 171 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 205

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 206 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 265

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 266 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASRIY 325

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 326 AGYTCSFAVSEVGGLFFWG 344



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 29/204 (14%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P V +  VA G  HTL+L    +V+ WG+GG G+LG   + K    P L+   +    G 
Sbjct: 263 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDFPGRGA 321

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            R                      I  G   S  V++ G L  F WG      + S    
Sbjct: 322 SR----------------------IYAGYTCSFAVSEVGGL--FFWG----ATNTSREST 353

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           + P     L   ++  +A G    +  + E  +       FG+LG G  + ++     E 
Sbjct: 354 MYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEV 413

Query: 390 PILESKRAKVVSCGARHSAVLTED 413
             L+   ++ V+ G  HS V+  D
Sbjct: 414 KTLDGIFSEQVAMGYSHSLVIARD 437



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           SC A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   +  + ACG  HTL
Sbjct: 92  SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 150

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 151 ALTETGSV 158


>gi|410966268|ref|XP_004001548.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Felis catus]
          Length = 521

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 120/267 (44%), Gaps = 51/267 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G +W WG   +GQLG G   K V  P LI  L H    
Sbjct: 146 GVRVRTVVSGSCAAHSLLITTEGTLWSWGRNEKGQLGHGD-TKRVEAPKLIEGLSHEV-- 202

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 203 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 240

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 241 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 299

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 300 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 359

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPRNIA 452
           +LG  +  D  +P LV +  F  R  A
Sbjct: 360 RLGHAEQKDEMVPRLVKLFDFPGRGAA 386



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 56/307 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 175 RNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 234

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 235 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 269

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 270 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 329

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 330 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQIY 389

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLL 460
            G   S  ++E G +  WG     +           P  V  + G+  R++ACG    ++
Sbjct: 390 AGYTCSFAVSEVGGLFFWGATNTSREST------MYPKAVQDLCGWRIRSLACGKSSIIV 443

Query: 461 LAETTQI 467
            A+ + I
Sbjct: 444 AADESTI 450



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 392 LESKRAKVVSCG--ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
           L   R + V  G  A HS ++T +G + SWG N+ GQLG GD+     P L+  +   + 
Sbjct: 144 LSGVRVRTVVSGSCAAHSLLITTEGTLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVI 203

Query: 449 RNIACGWWHTLLLAETTQI 467
            + ACG  HTL L ET  +
Sbjct: 204 VSAACGRNHTLALTETGSV 222


>gi|431906266|gb|ELK10463.1| Protein RCC2, partial [Pteropus alecto]
          Length = 427

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 52  GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 108

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 109 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 146

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 147 AV-PSPAQIMYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 205

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 206 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 265

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 266 RLGHAEQKDEMVPRLVKLFDF 286



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 81  RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 140

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 141 LGNQTDAVPSP---------------------AQIMYNGQP----ITKVACGAEFSMIMD 175

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 176 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 235

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 236 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 295

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 296 AGYTCSFAVSEVGGLFFWG 314



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 84/411 (20%), Positives = 137/411 (33%), Gaps = 109/411 (26%)

Query: 53  KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           + V  G C   +L  +  GKL +WG  +++GQ      K  E P      +   +V AA 
Sbjct: 56  RTVVSGSCAAHSLLITTEGKLWSWGR-NEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAAC 114

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
           G  H +++TE G V+                FG     Q     +  A+P          
Sbjct: 115 GRNHTLALTETGSVFA---------------FGENKMGQLGLGNQTDAVP---------- 149

Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
                                         SP  +  N G  ITKVA G   ++I+   G
Sbjct: 150 ------------------------------SPAQIMYN-GQPITKVACGAEFSMIMDCKG 178

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
            ++ +G    GQLG  S  K +     I   +     +   + + +             V
Sbjct: 179 NLYSFGCPEYGQLGHNSDGKFIARAQRIE-YDCELVPRRVAIFIEKTKDGQILPVPNVVV 237

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAA 348
           +++ACG  H+ V+     + ++G+G YG+ GH    D++ P     L D       QI A
Sbjct: 238 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGASQIYA 296

Query: 349 GLWHTVCISVEGRVYVFGGNQ--------------------------------------- 369
           G   +  +S  G ++ +G                                          
Sbjct: 297 GYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTI 356

Query: 370 -------FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
                  FG+LG G  + ++     E   L+    + V+ G  HS V+  D
Sbjct: 357 SWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVAMGYSHSLVIARD 407



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 392 LESKRAKVVSCG--ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
           L   R + V  G  A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   + 
Sbjct: 50  LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 109

Query: 449 RNIACGWWHTLLLAETTQI 467
            + ACG  HTL L ET  +
Sbjct: 110 VSAACGRNHTLALTETGSV 128


>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
           rerio]
          Length = 708

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 137/285 (48%), Gaps = 40/285 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-------PCLEH 264
           VK+T  A G  HTL+ +  G ++  G   EGQLGLG       + HL+       P    
Sbjct: 90  VKLT--ACGRTHTLVFTSRGNLYACGGNNEGQLGLGD-CNDRTSFHLVEFFNKQGPIKML 146

Query: 265 AASGKDRPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVV 304
           AA       L + G +     NS G+ G                  V  ++CG  HSA V
Sbjct: 147 AAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFV 206

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI--QVEQIAAGLWHTVCISVEGRV 362
           T  GAL TFG    G+ G  ST           + DI  +V Q+A G  HTV ++ E  V
Sbjct: 207 TVDGALYTFGEKDSGKLGL-STEKLANHKVPQQVTDIPDRVVQVACGGGHTVALT-ENEV 264

Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           Y FG  QFGQLG G    E+ +P+++E       R K  +CG  H+A++T++G + ++G 
Sbjct: 265 YSFGLGQFGQLGHGTFIFESRLPRVVEH--FRKGRVKHAACGENHTALITDNGLLYTFGD 322

Query: 422 NKYGQLGLGDS--IDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            ++G+LGLG+    ++  P+L P    +   ++ CG  H L+LA+
Sbjct: 323 GRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 117/254 (46%), Gaps = 38/254 (14%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           +++ G  HT ++++ G+++ +G    GQLGLG++  +                 ++P  V
Sbjct: 40  RISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTV-----------------NKPTCV 82

Query: 276 RQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
                    KA RS  VK  ACG  H+ V T  G L   G    GQ G G  ND  R S+
Sbjct: 83  ---------KALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCND--RTSF 131

Query: 335 -ASSLMDIQ--VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
                 + Q  ++ +AAG   +  ++ +GR+Y+ G N  GQ+G G +     P+ +    
Sbjct: 132 HLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV-- 189

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS--IDRNIPSLVPIHGFLPR 449
              KR   VSCG  HSA +T DG + ++G    G+LGL      +  +P  V        
Sbjct: 190 --GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVV 247

Query: 450 NIACGWWHTLLLAE 463
            +ACG  HT+ L E
Sbjct: 248 QVACGGGHTVALTE 261



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 12/138 (8%)

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           + ++GA+ TFG   +             PS      D+ + +I+ G  HT  ++  G+++
Sbjct: 9   IPESGAVFTFGKSKFADNA---------PSKFWLKNDVPL-RISCGDEHTALVTENGKLF 58

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
           +FG N +GQLG G     N P  ++   L S+R K+ +CG  H+ V T  G + + G N 
Sbjct: 59  MFGSNNWGQLGLGTKTTVNKPTCVKA--LRSERVKLTACGRTHTLVFTSRGNLYACGGNN 116

Query: 424 YGQLGLGDSIDRNIPSLV 441
            GQLGLGD  DR    LV
Sbjct: 117 EGQLGLGDCNDRTSFHLV 134


>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
          Length = 620

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 129/269 (47%), Gaps = 43/269 (15%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
           C+  L P  K+  VA G  HTLIL+  GQV+  G   EGQLGLG   +     HLI    
Sbjct: 125 CIKALKPE-KVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAF-HLI---- 178

Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
                              S    +  +K+++ G   SA +T  G L TFG    G+ G 
Sbjct: 179 -------------------SFFTSQHKIKQLSAGSNTSAALTAEGELYTFGEPESGKLGL 219

Query: 324 ------GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
                      QL P  +      +V Q+A G  HTV ++ E  VY FG  QFGQLG G 
Sbjct: 220 PPKLLVNHKVPQLVPGISE-----KVIQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGT 273

Query: 378 DQAENV-PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG--DSID 434
              E   PK++E+  ++ K+   V CG  H+A++TE G + ++G  ++G+LGLG  +  +
Sbjct: 274 FTFETSEPKVIES--VKDKKISHVCCGENHTALITESGLLYTFGDGRHGKLGLGMENFTN 331

Query: 435 RNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
           + +P+L      ++   +ACG  H L+ A
Sbjct: 332 QFVPTLCSSFLKYIVHLVACGGCHMLVFA 360



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 3/172 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+A+ T    L  FG   +GQ G GS     +P+   +L   +V+ +A G  HT
Sbjct: 85  LSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHT 144

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           + ++  G+VY  GGN  GQLG G D  E     L +      + K +S G+  SA LT +
Sbjct: 145 LILTGGGQVYATGGNNEGQLGLG-DTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAE 203

Query: 414 GQVLSWGWNKYGQLGLGDS--IDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           G++ ++G  + G+LGL     ++  +P LVP        +ACG  HT++L E
Sbjct: 204 GELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTE 255



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 12/144 (8%)

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
           G    +V D+GA+ TFG   + +           PS      DI +  ++ G  HT   +
Sbjct: 47  GEPDKMVPDSGAVFTFGKTKFAEN---------MPSKFWFKRDIPI-SLSCGDEHTAITT 96

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
              ++++FG N +GQLG G     N P  ++   L+ ++ K V+CG  H+ +LT  GQV 
Sbjct: 97  GNNKLFMFGSNNWGQLGLGSKATVNKPTCIKA--LKPEKVKFVACGRNHTLILTGGGQVY 154

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLV 441
           + G N  GQLGLGD+ +R+   L+
Sbjct: 155 ATGGNNEGQLGLGDTDERSAFHLI 178


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 123/257 (47%), Gaps = 28/257 (10%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + I  V+ G  H++ +   G+V+ WG G EGQLG+G   ++   P  I  L         
Sbjct: 73  LDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTL--------- 123

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQL 330
                          G   + +++CG  HS  +++ G + ++G    GQ G G  ++ Q 
Sbjct: 124 ---------------GGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQA 168

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLET 389
            P   +SL  I + Q+AAG  H+  +S+ G  Y +G N  GQL  +G +    + K    
Sbjct: 169 SPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSI 228

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
             L++     +SCG  H+AVLT+DGQV ++G N  GQL       R  P LV  I G + 
Sbjct: 229 DALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEGIKGQVS 288

Query: 449 RNIACGWWHTLLLAETT 465
           + I CG +HT+    TT
Sbjct: 289 K-IECGSYHTIAYVYTT 304



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 35/228 (15%)

Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
             L P  +    G+KI +V+ G  H+L LS+ GQV+ WG   +GQLGLG +     +P  
Sbjct: 113 INLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQK 172

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG-- 316
           +  LE        PL                   ++A GG HS  ++  G   ++GWG  
Sbjct: 173 VTSLEGI------PL------------------AQVAAGGSHSFALSLTGT--SYGWGSN 206

Query: 317 LYGQC---GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
             GQ    G  ST    +P    +L ++ V  I+ G  HT  ++ +G+V+ FG N  GQL
Sbjct: 207 SVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQL 266

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                     P+L+E   ++ + +K + CG+ H+ A +   GQV+S G
Sbjct: 267 QNNPRGKRRGPQLVEG--IKGQVSK-IECGSYHTIAYVYTTGQVVSLG 311



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 31/262 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++ + A+G RH+L+L    +V+  G    GQLG   R +    P  I  L        
Sbjct: 20  GLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLG-QKREQNTEQPEPIQAL-------- 70

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-Q 329
                           G   +  ++CG  HS  V   G +  +G G  GQ G G   +  
Sbjct: 71  ----------------GTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEIN 114

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           L P    +L  I++ Q++ G +H++ +S +G+V+ +G N  GQLG G+ Q+ +     + 
Sbjct: 115 LMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGM-QSSSQASPQKV 173

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL---GDSIDRNIP-SLVPIHG 445
             LE      V+ G  HS  L+  G    WG N  GQL L     ++  + P S+  +  
Sbjct: 174 TSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKN 233

Query: 446 FLPRNIACGWWHTLLLAETTQI 467
                I+CG+ HT +L +  Q+
Sbjct: 234 LGVIYISCGYEHTAVLTKDGQV 255


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 4/177 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACG RH+A+VT  G + ++G    G+ GHG  +D   P    +L ++ +E +A G 
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGE 369

Query: 351 WHTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G   +  G LG G D +  VPK +  P L+      +SCG  H+A
Sbjct: 370 YHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGP-LQGLHISSISCGPWHTA 428

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           ++T  G++ ++G   +G LG GD    +IP  V  + G      ACG WHT  + E 
Sbjct: 429 LVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEV 485



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 128/301 (42%), Gaps = 49/301 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A G RH  +++  G+V+ WG    G+LG G        P LI  L     E  A
Sbjct: 308 LDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSD-AHHPKLIDALSNLNIELVA 366

Query: 267 SGKDRPLLVR---------QGSVNS-----------------SGKAGRSYVKEIACGGRH 300
            G+     V           G+ NS                 +G     ++  I+CG  H
Sbjct: 367 CGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWH 426

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI---- 356
           +A+VT AG L TFG G +G  GHG  +    P    SL  ++  + A G+WHT  +    
Sbjct: 427 TALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVI 486

Query: 357 --------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
                   +  G+++ +G    G+LG G  +A  VP  +   ++E    + V+CG   + 
Sbjct: 487 IGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCV-AALVEPNFCQ-VACGHSLTV 544

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQ 466
            LT  G + + G   YGQLG     D  +P+ V   +       +ACG +H  +L   T+
Sbjct: 545 ALTNSGHIYTMGSPVYGQLG-NPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTE 603

Query: 467 I 467
           +
Sbjct: 604 V 604



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 42/258 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ I+ ++ G  HT +++  G+++ +G G  G LG G R   +  P  +  L+       
Sbjct: 414 GLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDR-DSISIPREVESLK------- 465

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G L T+G G  
Sbjct: 466 ----------------GLRTVRA-ACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK 508

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+  ++L++    Q+A G   TV ++  G +Y  G   +GQLG    
Sbjct: 509 GRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGN--P 566

Query: 379 QAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           QA+  +P  +E  + +S   + ++CGA H AVLT   +V +WG    G+LG G + DRN 
Sbjct: 567 QADGKLPARVEGKLSKS-FVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNT 625

Query: 438 PSLV-PIHGFLPRNIACG 454
           P+LV  +     ++IACG
Sbjct: 626 PTLVEALKDKQVKSIACG 643



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 6/138 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S++ + V+ IA G  H   ++ +G V+ +G    G+LG G D   + PKL+
Sbjct: 295 DSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLI 354

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPSLV--PI 443
           +   L +   ++V+CG  H+  +T  G + +WG   Y  G LG G  +   +P  V  P+
Sbjct: 355 DA--LSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPL 412

Query: 444 HGFLPRNIACGWWHTLLL 461
            G    +I+CG WHT L+
Sbjct: 413 QGLHISSISCGPWHTALV 430



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 29/181 (16%)

Query: 231 GQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
           G+++ WG G +G+LG G +  ++VPT     C+           LV              
Sbjct: 498 GKLFTWGDGDKGRLGHGDKEARLVPT-----CV---------AALVEPNFC--------- 534

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
              ++ACG   +  +T++G + T G  +YGQ G+   + +L       L    VE++A G
Sbjct: 535 ---QVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACG 591

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            +H   ++    VY +G    G+LG G     N P L+E   L+ K+ K ++CG   +A 
Sbjct: 592 AYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEA--LKDKQVKSIACGTNFTAA 649

Query: 410 L 410
           +
Sbjct: 650 I 650


>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
          Length = 1697

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 136/300 (45%), Gaps = 45/300 (15%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V +  G +   VA G  HTL+ +  G++   G   +GQLGLG     +    L P  
Sbjct: 77  PVCVKVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFC 136

Query: 263 EHA------ASGKDRPLLVRQGSV-----NSSGKAGR---------------SYVKEIAC 296
           ++A      A       L   G +     NS+G+ G                  +  ++C
Sbjct: 137 DYAPIKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPQELNMGQSIHWVSC 196

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCG---HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           G RHSA+VTD+G + TFG    G+ G   H   N    P    SL    V Q+A G  HT
Sbjct: 197 GYRHSALVTDSGDVYTFGESADGRLGLSAHQLANHSY-PQRVESLRS--VLQVACGGKHT 253

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI----LESKRAKVVSCGARHSAV 409
           + ++ E  +Y FGG +FGQLG G+     +  + ++P+        R   V+CG +HSA+
Sbjct: 254 LALT-EDELYCFGGGEFGQLGLGM-----LVFVADSPVAVGHFRKDRVTHVTCGEQHSAL 307

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAETTQ 466
           +T+ G + ++G  ++G+LG GD    N  +      F   +   +ACG  H L+ A   Q
Sbjct: 308 ITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLVFARPRQ 367



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 55/261 (21%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRPLLV 275
           ++ G  H+  +++ G+++ +G    GQLGL  +IK  V  P  +  L+            
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGL--QIKGPVTKPVCVKVLK------------ 84

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-----QL 330
                   G+  +S    +ACG  H+ V T  G +L  G    GQ G G  ND     +L
Sbjct: 85  --------GERAQS----VACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRL 132

Query: 331 RP--SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           RP   YA       ++ ++AG   +  ++ +GR++++G N  GQLG G D    +P+ L 
Sbjct: 133 RPFCDYAP------IKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPQELN 186

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL------GDSIDRNIPSLVP 442
                 +    VSCG RHSA++T+ G V ++G +  G+LGL        S  + + SL  
Sbjct: 187 M----GQSIHWVSCGYRHSALVTDSGDVYTFGESADGRLGLSAHQLANHSYPQRVESLRS 242

Query: 443 IHGFLPRNIACGWWHTLLLAE 463
           +       +ACG  HTL L E
Sbjct: 243 V-----LQVACGGKHTLALTE 258



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 22/181 (12%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           I+CG  HSA VT+ G L  FG    GQ G        +P     L   + + +A G  HT
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98

Query: 354 VCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           +  + +G +   GGN  GQLG G  + + +  +L   P  +    K++S G   SA LTE
Sbjct: 99  LVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLR--PFCDYAPIKLLSAGDHTSAALTE 156

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---------IACGWWHTLLLAE 463
           DG++  WG N  GQLG G+            H  LP+          ++CG+ H+ L+ +
Sbjct: 157 DGRLFLWGDNSAGQLGFGND----------SHALLPQELNMGQSIHWVSCGYRHSALVTD 206

Query: 464 T 464
           +
Sbjct: 207 S 207


>gi|453232423|ref|NP_505392.3| Protein GLO-4 [Caenorhabditis elegans]
 gi|393793285|emb|CCD68933.2| Protein GLO-4 [Caenorhabditis elegans]
          Length = 1386

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 107/217 (49%), Gaps = 35/217 (16%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           PG +   +A G  H L+LS  GQ+  WG    GQ G+G   ++           H   G 
Sbjct: 768 PGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANL--------HQVDG- 818

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-- 327
           D P                  +++IACG  HSA +   G+L TFGWG++GQ GHG  N  
Sbjct: 819 DWP-----------------AIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNS 861

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           +QL P+  + L+  +V QIA G  HTV ++  GRV V G   +GQ+G      +++ K+ 
Sbjct: 862 NQLVPTRVNGLI-CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVD----DDIKKVF 916

Query: 388 E-TPI-LESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
             TP+ L   R + ++    HS  +TED +V  WG N
Sbjct: 917 AFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWGRN 953



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 17/184 (9%)

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-----VEQI 346
           + IACG  H  V++ +G L  +G   +GQCG G +         ++L  +      +E+I
Sbjct: 773 RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHS------FRIANLHQVDGDWPAIEKI 826

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVSCGA 404
           A G +H+  I  +G ++ FG   +GQLG G     N  VP  +   I +  +   ++CG 
Sbjct: 827 ACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQ---IACGR 883

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLAE 463
            H+ VLT+ G+VL  G   YGQ+G+ D I +    + +P+     R+IA  ++H++ + E
Sbjct: 884 AHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITE 943

Query: 464 TTQI 467
             ++
Sbjct: 944 DNRV 947



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 98/259 (37%), Gaps = 73/259 (28%)

Query: 213  KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            K+T++A G  HT++L+D G+V   G G  GQ+G+   IK V     +P            
Sbjct: 875  KVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPL----------- 923

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ------------ 320
                          G   V++IA    HS  +T+   +  F WG   Q            
Sbjct: 924  --------------GPLRVRDIATHYYHSICITEDNRV--FEWGRNPQELKMRMFVMKKI 967

Query: 321  --CGHGSTNDQLRPSYASS--------------------------LMDIQVEQIAAGLWH 352
                  +T D   PS +++                           +D  +  +A GL H
Sbjct: 968  RSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSH 1027

Query: 353  TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK--VVSCGARHSAVL 410
            +  I+ EG +Y +G     QLG G       P      + E   AK   VS G  H+   
Sbjct: 1028 SALITSEGTLYTWGKGLDYQLGHGNKNERMEPH----QVFEPNGAKWVNVSLGNNHTIAS 1083

Query: 411  TEDGQVLSWGWNKYGQLGL 429
            T+DG V +WG N +GQ G+
Sbjct: 1084 TDDGSVFAWGKNDFGQCGV 1102



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 7/83 (8%)

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           +++P++LE P     R + ++CGA H  VL+  GQ+ +WG N++GQ G+G S    I +L
Sbjct: 759 QHLPRVLEYP---GGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSF--RIANL 813

Query: 441 VPIHGFLP--RNIACGWWHTLLL 461
             + G  P    IACG +H+  +
Sbjct: 814 HQVDGDWPAIEKIACGQFHSAFI 836


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 4/177 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACG RH+A+VT  G + ++G    G+ GHG  +D   P    +L ++ +E +A G 
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGE 369

Query: 351 WHTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G   +  G LG G D +  VPK +  P L+      +SCG  H+A
Sbjct: 370 YHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGP-LQGLHISSISCGPWHTA 428

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           ++T  G++ ++G   +G LG GD    +IP  V  + G      ACG WHT  + E 
Sbjct: 429 LVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEV 485



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 128/301 (42%), Gaps = 49/301 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A G RH  +++  G+V+ WG    G+LG G        P LI  L     E  A
Sbjct: 308 LDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSD-AHHPKLIDALSNLNIELVA 366

Query: 267 SGKDRPLLVR---------QGSVNS-----------------SGKAGRSYVKEIACGGRH 300
            G+     V           G+ NS                 +G     ++  I+CG  H
Sbjct: 367 CGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWH 426

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI---- 356
           +A+VT AG L TFG G +G  GHG  +    P    SL  ++  + A G+WHT  +    
Sbjct: 427 TALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVI 486

Query: 357 --------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
                   +  G+++ +G    G+LG G  +A  VP  +   ++E    + V+CG   + 
Sbjct: 487 IGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCV-AALVEPNFCQ-VACGHSLTV 544

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQ 466
            LT  G + + G   YGQLG     D  +P+ V   +       +ACG +H  +L   T+
Sbjct: 545 ALTNSGHIYTMGSPVYGQLG-NPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTE 603

Query: 467 I 467
           +
Sbjct: 604 V 604



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 42/258 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ I+ ++ G  HT +++  G+++ +G G  G LG G R   +  P  +  L+       
Sbjct: 414 GLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDR-DSISIPREVESLK------- 465

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G L T+G G  
Sbjct: 466 ----------------GLRTVR-AACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK 508

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+  ++L++    Q+A G   TV ++  G +Y  G   +GQLG    
Sbjct: 509 GRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGN--P 566

Query: 379 QAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           QA+  +P  +E  + +S   + ++CGA H AVLT   +V +WG    G+LG G + DRN 
Sbjct: 567 QADGKLPARVEGKLSKS-FVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNT 625

Query: 438 PSLV-PIHGFLPRNIACG 454
           P+LV  +     ++IACG
Sbjct: 626 PTLVEALKDKQVKSIACG 643



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 6/138 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S++ + V+ IA G  H   ++ +G V+ +G    G+LG G D   + PKL+
Sbjct: 295 DSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLI 354

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPSLV--PI 443
           +   L +   ++V+CG  H+  +T  G + +WG   Y  G LG G  +   +P  V  P+
Sbjct: 355 DA--LSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPL 412

Query: 444 HGFLPRNIACGWWHTLLL 461
            G    +I+CG WHT L+
Sbjct: 413 QGLHISSISCGPWHTALV 430



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 29/181 (16%)

Query: 231 GQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
           G+++ WG G +G+LG G +  ++VPT     C+           LV              
Sbjct: 498 GKLFTWGDGDKGRLGHGDKEARLVPT-----CV---------AALVEPNFC--------- 534

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
              ++ACG   +  +T++G + T G  +YGQ G+   + +L       L    VE++A G
Sbjct: 535 ---QVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACG 591

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            +H   ++    VY +G    G+LG G     N P L+E   L+ K+ K ++CG   +A 
Sbjct: 592 AYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEA--LKDKQVKSIACGTNFTAA 649

Query: 410 L 410
           +
Sbjct: 650 I 650


>gi|298709028|emb|CBJ30978.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 498

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 125/286 (43%), Gaps = 37/286 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GDE   +   LV +  G  + +VA G  HT +L D G V  +G    GQLGLG       
Sbjct: 59  GDEPDEMGDNLVAVPVGGTVAEVALGEDHTCMLLDSGNVVCFGKNDSGQLGLGDT----- 113

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                           R  +       +   AG S V  +A G RH+  + D G +  FG
Sbjct: 114 --------------STRGQIAGDVGEAADLGAGLSAVA-VALGCRHTCGLLDDGTVKCFG 158

Query: 315 WGLYGQCGHGSTND------QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           +  YGQ G G+T +      ++     +  +D  V  +AAG  HT  +  +G V  +G N
Sbjct: 159 YNNYGQLGQGTTENMGDDAGEMGDDLPAVSLDGTVSAVAAGCDHTCALMDDGTVMCWGRN 218

Query: 369 QFGQLGTGV--DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
             GQLGTG   D+ +     L    L+   A  ++ G  H+  L +D  +  WG N  GQ
Sbjct: 219 THGQLGTGDSDDRLDGNGLALVAVDLDGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQ 278

Query: 427 LGLGDSIDR---------NIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           LG GD +DR         N+P++    G +P  I CG ++T  L +
Sbjct: 279 LGQGDDLDRGDSPETLGANLPAIALGTGDVPTAIDCGSFYTCALLD 324



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 91/194 (46%), Gaps = 20/194 (10%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD-------IQV 343
           V E+A G  H+ ++ D+G ++ FG    GQ G G T+   R   A  + +       +  
Sbjct: 78  VAEVALGEDHTCMLLDSGNVVCFGKNDSGQLGLGDTS--TRGQIAGDVGEAADLGAGLSA 135

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV-----DQAENVPKLLETPILESKRAK 398
             +A G  HT  +  +G V  FG N +GQLG G      D A  +   L    L+   + 
Sbjct: 136 VAVALGCRHTCGLLDDGTVKCFGYNNYGQLGQGTTENMGDDAGEMGDDLPAVSLDGTVSA 195

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR---NIPSLVPI--HGFLPRNIAC 453
           V + G  H+  L +DG V+ WG N +GQLG GDS DR   N  +LV +   G +   IA 
Sbjct: 196 VAA-GCDHTCALMDDGTVMCWGRNTHGQLGTGDSDDRLDGNGLALVAVDLDGSVATAIAA 254

Query: 454 GWWHTLLLAETTQI 467
           G  HT  L +   I
Sbjct: 255 GESHTCALLDDDSI 268



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 103/237 (43%), Gaps = 29/237 (12%)

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
           L  G+    VA G RHT  L D G V  +GY   GQLG G+   M          +    
Sbjct: 129 LGAGLSAVAVALGCRHTCGLLDDGTVKCFGYNNYGQLGQGTTENMGD--------DAGEM 180

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
           G D P +   G+V++           +A G  H+  + D G ++ +G   +GQ G G ++
Sbjct: 181 GDDLPAVSLDGTVSA-----------VAAGCDHTCALMDDGTVMCWGRNTHGQLGTGDSD 229

Query: 328 DQLRPS----YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-N 382
           D+L  +     A  L       IAAG  HT  +  +  +  +G N  GQLG G D    +
Sbjct: 230 DRLDGNGLALVAVDLDGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGD 289

Query: 383 VPKLL--ETPILESKRAKV---VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
            P+ L    P +      V   + CG+ ++  L +DG    +G N  G+LG G + D
Sbjct: 290 SPETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGANADGELGTGTTQD 346



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 97/240 (40%), Gaps = 41/240 (17%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            ++ VAAG  HT  L D G V  WG    GQLG G               +    G    
Sbjct: 192 TVSAVAAGCDHTCALMDDGTVMCWGRNTHGQLGTGDS-------------DDRLDGNGLA 238

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ--- 329
           L+    +V+  G    S    IA G  H+  + D  ++  +G    GQ G G   D+   
Sbjct: 239 LV----AVDLDG----SVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDS 290

Query: 330 ------LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ---- 379
                   P+ A    D+    I  G ++T  +  +G    FG N  G+LGTG  Q    
Sbjct: 291 PETLGANLPAIALGTGDVPT-AIDCGSFYTCALLDDGSAKCFGANADGELGTGTTQDVGL 349

Query: 380 --AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
              E    L+   I ++ +  + + GA   A++++D  V+ WG    GQLG G   D NI
Sbjct: 350 LPTEMGDNLIAAAIGDTAQ-DIAAGGATTCAIVSDD-SVICWGQGSSGQLGQG--TDENI 405



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 25/182 (13%)

Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
           T +AAG  HT  L D   +  WG    GQLG G  +    +P  +        G + P +
Sbjct: 250 TAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSPETL--------GANLPAI 301

Query: 275 -VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND----- 328
            +  G V ++          I CG  ++  + D G+   FG    G+ G G+T D     
Sbjct: 302 ALGTGDVPTA----------IDCGSFYTCALLDDGSAKCFGANADGELGTGTTQDVGLLP 351

Query: 329 -QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
            ++  +  ++ +    + IAAG   T  I  +  V  +G    GQLG G D+   V + +
Sbjct: 352 TEMGDNLIAAAIGDTAQDIAAGGATTCAIVSDDSVICWGQGSSGQLGQGTDENIIVIEDV 411

Query: 388 ET 389
           ET
Sbjct: 412 ET 413



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQA-------ENVPKLLETPILESKRAKVVSCGARH 406
           VC ++      +G N++GQLG G +         E    L+  P+        V+ G  H
Sbjct: 30  VCATIGSSAKCWGNNRWGQLGRGDNTTLIGDEPDEMGDNLVAVPV--GGTVAEVALGEDH 87

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           + +L + G V+ +G N  GQLGLGD+  R
Sbjct: 88  TCMLLDSGNVVCFGKNDSGQLGLGDTSTR 116


>gi|62511101|sp|Q5DX34.1|RPGRH_CAEEL RecName: Full=X-linked retinitis pigmentosa GTPase regulator
           homolog; AltName: Full=Gut granule loss protein 4
          Length = 1392

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 31/215 (14%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           PG +   +A G  H L+LS  GQ+  WG    GQ G+G   ++           H   G 
Sbjct: 774 PGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANL--------HQVDG- 824

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-- 327
           D P                  +++IACG  HSA +   G+L TFGWG++GQ GHG  N  
Sbjct: 825 DWP-----------------AIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNS 867

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           +QL P+  + L+  +V QIA G  HTV ++  GRV V G   +GQ+G   D  + V    
Sbjct: 868 NQLVPTRVNGLI-CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVD-DDIKKVFAFT 925

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
             P L   R + ++    HS  +TED +V  WG N
Sbjct: 926 PLP-LGPLRVRDIATHYYHSICITEDNRVFEWGRN 959



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 17/184 (9%)

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-----VEQI 346
           + IACG  H  V++ +G L  +G   +GQCG G +         ++L  +      +E+I
Sbjct: 779 RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHS------FRIANLHQVDGDWPAIEKI 832

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVSCGA 404
           A G +H+  I  +G ++ FG   +GQLG G     N  VP  +   I +  +   ++CG 
Sbjct: 833 ACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQ---IACGR 889

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLAE 463
            H+ VLT+ G+VL  G   YGQ+G+ D I +    + +P+     R+IA  ++H++ + E
Sbjct: 890 AHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITE 949

Query: 464 TTQI 467
             ++
Sbjct: 950 DNRV 953



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 98/259 (37%), Gaps = 73/259 (28%)

Query: 213  KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            K+T++A G  HT++L+D G+V   G G  GQ+G+   IK V     +P            
Sbjct: 881  KVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPL----------- 929

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ------------ 320
                          G   V++IA    HS  +T+   +  F WG   Q            
Sbjct: 930  --------------GPLRVRDIATHYYHSICITEDNRV--FEWGRNPQELKMRMFVMKKI 973

Query: 321  --CGHGSTNDQLRPSYASS--------------------------LMDIQVEQIAAGLWH 352
                  +T D   PS +++                           +D  +  +A GL H
Sbjct: 974  RSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSH 1033

Query: 353  TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK--VVSCGARHSAVL 410
            +  I+ EG +Y +G     QLG G       P      + E   AK   VS G  H+   
Sbjct: 1034 SALITSEGTLYTWGKGLDYQLGHGNKNERMEPH----QVFEPNGAKWVNVSLGNNHTIAS 1089

Query: 411  TEDGQVLSWGWNKYGQLGL 429
            T+DG V +WG N +GQ G+
Sbjct: 1090 TDDGSVFAWGKNDFGQCGV 1108



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 7/83 (8%)

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           +++P++LE P     R + ++CGA H  VL+  GQ+ +WG N++GQ G+G S    I +L
Sbjct: 765 QHLPRVLEYP---GGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSF--RIANL 819

Query: 441 VPIHGFLP--RNIACGWWHTLLL 461
             + G  P    IACG +H+  +
Sbjct: 820 HQVDGDWPAIEKIACGQFHSAFI 842


>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
 gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
          Length = 418

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 127/262 (48%), Gaps = 42/262 (16%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDR 271
           ++ +V+AG  H+  ++  G+++ WG    GQLGLG    K+V TP  + CL         
Sbjct: 119 RVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDFR----- 173

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS------ 325
                              +K +A G  HS  VT+ G +L++G    G+ GHG       
Sbjct: 174 -------------------IKMVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILG 214

Query: 326 ---TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
              T  +  P    +   I++++IAAG+ H+ CI  +G +++FG  Q  + G G      
Sbjct: 215 FSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFG--QKTEKGFGRSNEAF 272

Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            P ++E    E   ++ V+CG  H+ V+T+ G + SWG N+ G LGLG +     P ++ 
Sbjct: 273 RPNIVE----EIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVCSPEILK 328

Query: 443 IHGF-LP-RNIACGWWHTLLLA 462
              F LP   ++CGW HT +++
Sbjct: 329 SSLFKLPVSKVSCGWKHTAVIS 350



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 112/239 (46%), Gaps = 34/239 (14%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG G  G+LGLG  ++   +P + P     A   D P                     +A
Sbjct: 35  WGNGDYGRLGLGV-LESRWSPTVCPFF--LARAADPP-------------------ASLA 72

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           CGG H+  +T +G +   G   +GQ G GS+    L P   S   + +V +++AG  H+ 
Sbjct: 73  CGGAHTLFLTQSGRVFATGLNDFGQLGVGSSVTHTLEPVEVSGFHE-RVVEVSAGNHHSC 131

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
            ++ +G+++V+G N  GQLG G    + V    +   L   R K+V+ G+ HS  +TE+G
Sbjct: 132 AVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEG 191

Query: 415 QVLSWGWNKYGQLG-------LGDSIDRN--IPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           +VLSWG    G+LG       LG S+  +   P L+    G   + IA G  H+  + E
Sbjct: 192 EVLSWGAAGSGRLGHGRQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDE 250



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 123/321 (38%), Gaps = 69/321 (21%)

Query: 65  ATSESGKLITWGSADDEGQSYLT--SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           A +  GKL  WG  +  GQ  L   +GK   TP      T+  +   A G  H ++VTE 
Sbjct: 132 AVTADGKLFVWGR-NSGGQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEE 190

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           GEV +WG              G  G  ++ S    S   +E  P   K    + +K +K 
Sbjct: 191 GEVLSWG----------AAGSGRLGHGRQSSILGFSLTTSEYTPRLIKNF--DGIKIKKI 238

Query: 183 SSAREESENPASGDEFF---------------TLSPCLVTLNPGVKITKVAAGGRHTLIL 227
           ++    S         F                  P +V   P  +  +VA GG HT ++
Sbjct: 239 AAGMLHSACIDEKGTLFIFGQKTEKGFGRSNEAFRPNIVEEIPFSE--EVACGGYHTCVV 296

Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
           +D G ++ WG    G LGLG    MV +P ++      +S    P               
Sbjct: 297 TDSGDLYSWGSNENGCLGLGG-TDMVCSPEILK-----SSLFKLP--------------- 335

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWG-----LY-------GQCGHGSTNDQLRPSYA 335
              V +++CG +H+AV++    + T+GWG      +       GQ GHG+  D   P   
Sbjct: 336 ---VSKVSCGWKHTAVIS-GDDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMV 391

Query: 336 SSLMDIQVEQIAAGLWHTVCI 356
               + +   ++ G  HT  I
Sbjct: 392 PFGKNARAVHVSCGFNHTGAI 412


>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
 gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
          Length = 1812

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 49/284 (17%)

Query: 203  PCLVTLNP--GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PTPHLI 259
            P LV L      K+T VAAG  H L+L D  ++W WG+ G+GQLG G+R  +  P P  +
Sbjct: 1527 PVLVDLASLGSSKVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQV 1586

Query: 260  PCLEHAAS------------------------GKD--------------RPLLVRQGSVN 281
                 A S                        GK+              RP+LV    +N
Sbjct: 1587 DLEPLAGSTVTGVWAGDFHSIILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLN 1646

Query: 282  SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA--SSLM 339
                 GR  V  ++ G  H+  + + G L  +G    G+ G GST D+ RP     +SL 
Sbjct: 1647 -----GRK-VMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLD 1700

Query: 340  DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
              +V  I+AG W+TV +   GR++ +G N+ G LG G    ++ P  ++   L  ++   
Sbjct: 1701 GHKVVAISAGGWNTVALDELGRLWAWGPNESGLLGDGTTINQHRPVQVDLTPLNGRKVVA 1760

Query: 400  VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            VS G+ +  V+ + G++ +WG N YGQLG G    R  P  V +
Sbjct: 1761 VSAGSFYFFVVDDRGELWAWGSNSYGQLGDGTKTRRLKPVRVDM 1804



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 46/278 (16%)

Query: 203  PCLVTLNP--GVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            P L  L P  G  +  ++  +G   +  + D G++W WGY   G LG G+ I        
Sbjct: 1471 PVLTDLTPLGGSTVVSISTGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGID------- 1523

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
                      ++RP+LV   S+      G S V  +A G  H+ V+ D   L  +G    
Sbjct: 1524 ----------RNRPVLVDLASL------GSSKVTAVAAGRYHNLVLDDQSRLWAWGHNGD 1567

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQ----------IAAGLWHTVCISVEGRVYVFGGN 368
            GQ G G+  +   P      + IQV+           + AG +H++ +   GR++V+G N
Sbjct: 1568 GQLGDGTRTNVAYP------LPIQVDLEPLAGSTVTGVWAGDFHSIILDDLGRLWVWGKN 1621

Query: 369  QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            ++G+LG G    +  P L++   L  ++   VS G  H+  L E G + +WG N  G+LG
Sbjct: 1622 KYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGLNDSGRLG 1681

Query: 429  LGDSIDRNIP---SLVPIHGFLPRNIACGWWHTLLLAE 463
             G + DR+ P    L  + G     I+ G W+T+ L E
Sbjct: 1682 DGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDE 1719



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 5/129 (3%)

Query: 344  EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE-TPILESKRAKVVS- 401
             ++AAG  H++ +  + R++ +G N+ G LG G ++    P L + TP+  S    + + 
Sbjct: 1431 NRMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGSTVVSISTG 1490

Query: 402  CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHT 458
             GA  S  + + G++ +WG+N  G LG G  IDRN P LV +          +A G +H 
Sbjct: 1491 SGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSSKVTAVAAGRYHN 1550

Query: 459  LLLAETTQI 467
            L+L + +++
Sbjct: 1551 LVLDDQSRL 1559


>gi|426222850|ref|XP_004005595.1| PREDICTED: protein RCC2 [Ovis aries]
          Length = 655

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 280 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 336

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 337 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 374

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 375 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 433

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 434 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 493

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 494 RLGHAEQKDEMVPRLVKLFDF 514



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 309 RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 368

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 369 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 403

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 404 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 463

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 464 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 523

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 524 AGYTCSFAVSEVGGLFFWG 542



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 392 LESKRAKVVSCG--ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
           L   R + V  G  A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   + 
Sbjct: 278 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 337

Query: 449 RNIACGWWHTLLLAETTQI 467
            + ACG  HTL L ET  +
Sbjct: 338 VSAACGRNHTLALTETGSV 356


>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
 gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
 gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
          Length = 480

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 135/293 (46%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   V                 I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  +    +   P   S + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E   PK++E   +  +    +SCG  H+A++T+
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHTALITD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  +  IP+L      F+ + +ACG  H ++ A
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   ++     E K  K +S G+  SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHSAFVT 206



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 42/281 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ +++   +++ +G    GQLGLGS+   +  P  +  L     + AA G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                     +K+++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  + ++   P   +  +   V  I+ G +H+  ++ +G +YVFG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 368 NQFGQLGTGVDQAEN--VPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            + G+LG       N   P+L+ E P    ++   V+CG  H+ VLTE+  V ++G  ++
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIP----EKVIQVACGGEHTVVLTENA-VYTFGLGQF 271

Query: 425 GQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           GQLGLG  + + + P ++  I       I+CG  HT L+ +
Sbjct: 272 GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITD 312



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 28/162 (17%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P LV+  P  K+ +VA GG HT++L++   V+ +G G  GQLGLG+ +     P +I  
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           +      +D+ +               SY   I+CG  H+A++TD G + TFG G +G+ 
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGKL 327

Query: 322 GHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           G G  N  +   P+  S+ +   V+ +A G  H V  +   R
Sbjct: 328 GLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHR 369


>gi|224135099|ref|XP_002321983.1| predicted protein [Populus trichocarpa]
 gi|222868979|gb|EEF06110.1| predicted protein [Populus trichocarpa]
          Length = 538

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 130/259 (50%), Gaps = 30/259 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGK 269
           G++I + AAG   T+++SD G+V+ +G    G+   G +  K V TP L+  L++     
Sbjct: 200 GIRIIQAAAGPGRTMLISDAGEVYAFGKDSFGEAEYGVQGTKTVTTPQLVESLKNI---- 255

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-ND 328
                               +V + A G   +AV++  G + TF WG  G+ GH +  ND
Sbjct: 256 --------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDGKLGHQTEPND 295

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGTGVDQAENVPK 385
            +      +L +I V QIAAG  + + ++ +     VY  G    G+LG G    E  P+
Sbjct: 296 VVPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPR 355

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIH 444
           L+E   L + +  VV+ GA H+AV+  DG+V +WGW +YG LG G+    ++P +V  + 
Sbjct: 356 LIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALS 415

Query: 445 GFLPRNIACGWWHTLLLAE 463
                ++A G + T ++++
Sbjct: 416 KVKAVHVATGDYTTFVVSD 434



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 10/169 (5%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT  G   +FG    GQ GHG+T ++ RP    SL  I++ Q AAG   T+ IS  
Sbjct: 160 HSIAVTSNGVAYSFGSNSSGQLGHGTTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDA 219

Query: 360 GRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           G VY FG + FG+   GV   + V  P+L+E+  L++      + G   +AVL+ +G+V 
Sbjct: 220 GEVYAFGKDSFGEAEYGVQGTKTVTTPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 277

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLLA 462
           ++ W   G+LG     +  +P   P+ G L       IA G+ + L LA
Sbjct: 278 TFSWGNDGKLGHQTEPNDVVPH--PLLGALENIPVVQIAAGYCYLLALA 324



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 174/441 (39%), Gaps = 118/441 (26%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAGW 113
           G G ++A + +G   ++GS +  GQ       HG T E + P    +     +++AAAG 
Sbjct: 157 GPGHSIAVTSNGVAYSFGS-NSSGQL-----GHGTTEEEWRPRQIRSLQGIRIIQAAAGP 210

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
              + +++AGEVY +G                     KDS G                  
Sbjct: 211 GRTMLISDAGEVYAFG---------------------KDSFG------------------ 231

Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
                         E+E    G +  T +P LV     + + + A G   T +LS  G+V
Sbjct: 232 --------------EAEYGVQGTKTVT-TPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 276

Query: 234 WGWGYGGEGQLGLGSRIK-MVPTPHL-----IPCLEHAASGKDRPLLVRQ---------- 277
           + + +G +G+LG  +    +VP P L     IP ++ AA       L  Q          
Sbjct: 277 YTFSWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVG 336

Query: 278 ----GSVNSSGKAGRSYVKEI-------------ACGGRHSAVVTDAGALLTFGWGLYGQ 320
               G +    +    Y + I             A G  H+AVV   G + T+GWG YG 
Sbjct: 337 CGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGC 396

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-- 378
            GHG+   +  P    +L  ++   +A G + T  +S +G VY FG  +   LG   D  
Sbjct: 397 LGHGNEECESVPKVVDALSKVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNGDGD 456

Query: 379 ----QAENV--PKLLETPILESKRAKVVSCGAR-------HSAVLTEDGQVLSWGWNKYG 425
               +  NV  P+L+ +  L+  + +VV            H+  LTE G++ ++G    G
Sbjct: 457 GQGNRHTNVLSPELVTS--LKEVKERVVQISLTNSVYWNAHTFALTESGKLFAFGAGDKG 514

Query: 426 QLGL---GDSIDRNIPSLVPI 443
           QLG+    +  +R  P  V +
Sbjct: 515 QLGMELVNNQTERGNPEQVDV 535



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 5/126 (3%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ ++  G  Y FG N  GQLG G  + E  P+ + +  L+  R    + G 
Sbjct: 153 QAIAGPGHSIAVTSNGVAYSFGSNSSGQLGHGTTEEEWRPRQIRS--LQGIRIIQAAAGP 210

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI--PSLV-PIHGFLPRNIACGWWHTLLL 461
             + ++++ G+V ++G + +G+   G    + +  P LV  +        A G + T +L
Sbjct: 211 GRTMLISDAGEVYAFGKDSFGEAEYGVQGTKTVTTPQLVESLKNIFVVQAAIGNFFTAVL 270

Query: 462 AETTQI 467
           +   ++
Sbjct: 271 SREGRV 276


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 40/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G++I  V+ G  HT +++ MGQ++ +G G  G LG G  +K +  P  +  L        
Sbjct: 183 GLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGD-LKSISCPREVESL-------- 233

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD-----------AGALLTFGWGLYG 319
                          +G   +  +ACG  H+A + +           AG L T+G G   
Sbjct: 234 ---------------SGLKTIA-VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG    +L+P+  +SL+D    ++A G   TV ++  G+V+  G + +GQLG     
Sbjct: 278 RLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNL--N 335

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           ++  P L+E  I  S+    ++CG+ H AVLT   +V +WG    G+LG GD  DR +P+
Sbjct: 336 SDGRPCLVEDKI-ASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPT 394

Query: 440 LV-PIHGFLPRNIACG 454
            V  +     R+IACG
Sbjct: 395 TVEALRDRAVRHIACG 410



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  + CG RH+++VT  G + T+G    G+ GHG+  D + P    SL    ++ +A G 
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGE 138

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  ++  G +Y +G   +  G LG G D    +P+ +  P LE  +   VSCG  H+A
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTA 197

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           ++T  GQ+ ++G   +G LG GD    + P  V  + G     +ACG WHT  + E
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVE 253



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 70/175 (40%), Gaps = 28/175 (16%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G+VW  G    GQLG         
Sbjct: 282 GDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG--------- 332

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       +   RP LV         K    +V +IACG  H AV+T    + T+G
Sbjct: 333 ----------NLNSDGRPCLVED-------KIASEHVLQIACGSYHVAVLTSRSEVFTWG 375

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
            G  G+ GHG   D+  P+   +L D  V  IA G   T  I +    +V G +Q
Sbjct: 376 KGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAICLHK--WVSGADQ 428


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 123/262 (46%), Gaps = 38/262 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
            IT+VA G +HTL  ++ G+V+ WG    GQLGL     M+PTP ++  L        A 
Sbjct: 85  NITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIAC 144

Query: 268 GKDRPL-LVRQGSV-----NSSGKAGRSY------------------VKEIACGGRHSAV 303
           G+   + L   G +     NS G+ G                     +  I+CG   S  
Sbjct: 145 GRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFA 204

Query: 304 VTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
           VT +GA+  +GWG   +GQ G G T D+ +P+   SL   +V  I  G+ HT  ++ +G 
Sbjct: 205 VTPSGAV--YGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGG 262

Query: 362 VYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSW 419
           V+ FG   +GQLG      E +P K+LE   L       + CG  H+ A +   G++ ++
Sbjct: 263 VFTFGAGMYGQLGHCTSANEMLPRKVLE---LMGTTVTQICCGRCHTLAFVPSKGRIYAF 319

Query: 420 GWNKYGQLGLGDSIDRNIPSLV 441
           G    GQLG   + + N P LV
Sbjct: 320 GLGGSGQLGTKSTANVNSPQLV 341



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 149/358 (41%), Gaps = 69/358 (19%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           D+   GCG    +   + GKL ++G  +D GQ  L   +     EP       ++ + A 
Sbjct: 35  DIVQVGCGENHTILVMKDGKLFSFG-LNDYGQ--LGHCRSRTRAEPVDGLEAHNITQVAC 91

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
           G  H ++  E GEV+ WG               S  + Q     ++S +PT +   S   
Sbjct: 92  GAQHTLAQNEWGEVFAWG---------------SNSNGQLGLNVEESMMPTPKMVKS--L 134

Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFT------------------LSPCLVTLNPGVK 213
           A ++VV+    +  R  S    +  E +                     PCLV L  G+ 
Sbjct: 135 ATKQVVQ---IACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIP 191

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I+ ++ G   +  ++  G V+GWG    GQLGLG                      DRP 
Sbjct: 192 ISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDT-------------------TDRP- 231

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
              Q +   S +  R  V  I CG  H+A +T  G + TFG G+YGQ GH ++ +++ P 
Sbjct: 232 ---QPTQLKSLRFQR--VTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPR 286

Query: 334 YASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
               LM   V QI  G  HT+  +  +GR+Y FG    GQLGT      N P+L+  P
Sbjct: 287 KVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLVIGP 344



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 124/274 (45%), Gaps = 30/274 (10%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG-LGSRIKMVPTPHL-IPCLEHAASGKDR 271
           I +V  G  HT+++   G+++ +G    GQLG   SR +  P   L    +   A G   
Sbjct: 36  IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEPVDGLEAHNITQVACGAQH 95

Query: 272 PLLVRQ-GSV-----NSSGKAGRSY------------------VKEIACGGRHSAVVTDA 307
            L   + G V     NS+G+ G +                   V +IACG  HS  +T+ 
Sbjct: 96  TLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNV 155

Query: 308 GALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
           G +  +G   +GQ G GS+   + +P     L  I +  I+ G   +  ++  G VY +G
Sbjct: 156 GEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWG 215

Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            N FGQLG G     + P+  +   L  +R   + CG  H+A LT DG V ++G   YGQ
Sbjct: 216 KNSFGQLGLG--DTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQ 273

Query: 427 LGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTL 459
           LG   S +  +P  ++ + G     I CG  HTL
Sbjct: 274 LGHCTSANEMLPRKVLELMGTTVTQICCGRCHTL 307



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
           +L+D  + Q+  G  HT+ +  +G+++ FG N +GQLG    +    P       LE+  
Sbjct: 31  TLVD-DIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP----VDGLEAHN 85

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIAC 453
              V+CGA+H+    E G+V +WG N  GQLGL    +  +P+   +     +    IAC
Sbjct: 86  ITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVE-ESMMPTPKMVKSLATKQVVQIAC 144

Query: 454 GWWHTLLLAETTQI 467
           G  H++ L    +I
Sbjct: 145 GRSHSMALTNVGEI 158


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 40/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G++I  V+ G  HT +++ MGQ++ +G G  G LG G  +K +  P  +  L        
Sbjct: 183 GLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGD-LKSISCPREVESL-------- 233

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD-----------AGALLTFGWGLYG 319
                          +G   +  +ACG  H+A + +           AG L T+G G   
Sbjct: 234 ---------------SGLKTIA-VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG    +L+P+  +SL+D    ++A G   TV ++  G+V+  G + +GQLG     
Sbjct: 278 RLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNL--N 335

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           ++  P L+E  I  S+    ++CG+ H AVLT   +V +WG    G+LG GD  DR +P+
Sbjct: 336 SDGRPCLVEDKI-ASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPT 394

Query: 440 LV-PIHGFLPRNIACG 454
            V  +     R+IACG
Sbjct: 395 TVEALRDRAVRHIACG 410



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  + CG RH+++VT  G + T+G    G+ GHG+  D + P    SL    ++ +A G 
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGE 138

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  ++  G +Y +G   +  G LG G D    +P+ +  P LE  +   VSCG  H+A
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTA 197

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           ++T  GQ+ ++G   +G LG GD    + P  V  + G     +ACG WHT  + E
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVE 253



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 70/175 (40%), Gaps = 28/175 (16%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G+VW  G    GQLG         
Sbjct: 282 GDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG--------- 332

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       +   RP LV         K    +V +IACG  H AV+T    + T+G
Sbjct: 333 ----------NLNSDGRPCLVED-------KIASEHVLQIACGSYHVAVLTSRSEVFTWG 375

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
            G  G+ GHG   D+  P+   +L D  V  IA G   T  I +    +V G +Q
Sbjct: 376 KGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAICLHK--WVSGADQ 428


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 119/256 (46%), Gaps = 35/256 (13%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKD 270
           V  + ++ G  H   ++D G V+ WG G  GQLG G  + K++P P  +P +        
Sbjct: 273 VVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQP--VPRI-------- 322

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                            +  VK ++ G  H+  VT  GAL T+G G  G+ GH     +L
Sbjct: 323 -----------------KGEVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRL 365

Query: 331 RPSYASSLMD--IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            P+  ++ ++  + V    AG  HT+ ++  G+V+ FG    G+LG G D  +  P  L 
Sbjct: 366 IPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLS 425

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP---SLVPIHG 445
              LES+R   ++ G  HS  LT+ GQ+ +WG  K G+LG G   D  +P   +L+    
Sbjct: 426 A--LESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDT 483

Query: 446 FLPRNIACGWWHTLLL 461
                +A G  HT + 
Sbjct: 484 IKAIAVAAGEAHTCIF 499



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 31/265 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVK--ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           GD+   + P  V   P +K  +  V+AG  HT+ ++  G ++ WG G EG+LG     + 
Sbjct: 308 GDDVDKIIPQPV---PRIKGEVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQ- 363

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                LIP L  A      P+   Q                   GG H+ V+   G + +
Sbjct: 364 ----RLIPTLVAAFIEWGMPVAAAQ------------------AGGSHTLVLNRRGQVFS 401

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           FG G  G+ GHG+ NDQ  P++ S+L   +   IAAG  H+V ++ +G++Y +G  + G+
Sbjct: 402 FGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGR 461

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G D  E +P+ L     ++ +A  V+ G  H+ +   +G +++ G   +G++  G  
Sbjct: 462 LGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGSC 521

Query: 433 IDRNIPSLVPIHGFLPRNIACGWWH 457
               + +L   H  + R  +  W H
Sbjct: 522 AQDMLDTL---HTAISRQSSNDWHH 543



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 2/181 (1%)

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
           R     ++ G  H A VTD G + T+G G YGQ GHG   D++ P     +   +V+ ++
Sbjct: 272 RVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKG-EVKSVS 330

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
           AG +HTV ++  G ++ +G  + G+LG   +    +P L+   I           G  H+
Sbjct: 331 AGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHT 390

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETTQ 466
            VL   GQV S+G    G+LG G+  D+  P+ L  +      +IA G+ H++ L +  Q
Sbjct: 391 LVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQ 450

Query: 467 I 467
           I
Sbjct: 451 I 451



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 113/282 (40%), Gaps = 57/282 (20%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCV 117
           G G   A +++G + TWG     GQ  L  G   +   P P+P     VK+ +AG+ H V
Sbjct: 281 GAGHCAAVTDTGLVYTWGQGR-YGQ--LGHGDDVDKIIPQPVPRIKGEVKSVSAGFYHTV 337

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA-------PPSDK 170
           +VT  G ++TWG              G  G    +    Q  +PT  A       P +  
Sbjct: 338 AVTHHGALFTWG-------------DGKEGKLGHNDNA-QRLIPTLVAAFIEWGMPVAAA 383

Query: 171 RAGEE---VVKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
           +AG     V+ RR    S    +S     G++    SP  ++     +   +AAG  H++
Sbjct: 384 QAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSV 443

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
            L+D GQ++ WG G  G+LG GS    V  P  +  + H                     
Sbjct: 444 ALTDQGQIYTWGCGKLGRLGHGSDSDEV-LPRKLALISHDT------------------- 483

Query: 286 AGRSYVKEI--ACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
                +K I  A G  H+ +    G+L+T G   +G+   GS
Sbjct: 484 -----IKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGS 520


>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Ornithorhynchus anatinus]
          Length = 806

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 142/294 (48%), Gaps = 43/294 (14%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   +GQLGLG         +I    +
Sbjct: 166 CVKALKPE-KVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTS 224

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSY---------------VKEIA 295
            + I  L  +A       L   G +     NS G+ G +                V  ++
Sbjct: 225 RYKIKQL--SAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVVIGKPVSWVS 282

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL---MDIQVEQIAAGLWH 352
           CG  HSA+VT  G L TFG    G+ G  S  +QL+      L   +  +V Q+A G  H
Sbjct: 283 CGYYHSALVTTDGELYTFGEPENGKLGLSS--EQLKNHRIPQLVPGISGKVNQVACGGGH 340

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLT 411
           TV ++ E  VY FG  +FGQLG G    E +VPK++E   L  ++   V+CG  H+A+++
Sbjct: 341 TVALTEED-VYTFGLGEFGQLGLGTCIFETSVPKVVEH--LRKQKIHYVACGENHTALIS 397

Query: 412 EDGQVLSWGWNKYGQLGLGDS--IDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           + G + ++G  ++G+LGLG+    ++ IP+L      F    +ACG  H L+ A
Sbjct: 398 DTGLMYTFGDGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACGGCHMLVFA 451



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 139/284 (48%), Gaps = 40/284 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASG 268
           + +++ G  HT  ++   +++  G    GQLGLGS+   V  P  +  L     + AA G
Sbjct: 123 LAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKT-TVNKPTCVKALKPEKVKFAACG 181

Query: 269 KDRPLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVV 304
           ++  L+  +G        NS G+ G                  R  +K+++ G   SA +
Sbjct: 182 RNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAAL 241

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
           T+ G L  +G    GQ G  S ++   P     ++   V  ++ G +H+  ++ +G +Y 
Sbjct: 242 TEDGELYMWGDNSEGQIGLASESNVCVPCRV--VIGKPVSWVSCGYYHSALVTTDGELYT 299

Query: 365 FGGNQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           FG  + G+LG   +Q +N  +P+L+  P + S +   V+CG  H+  LTE+  V ++G  
Sbjct: 300 FGEPENGKLGLSSEQLKNHRIPQLV--PGI-SGKVNQVACGGGHTVALTEE-DVYTFGLG 355

Query: 423 KYGQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
           ++GQLGLG  I + ++P +V  +       +ACG  HT L+++T
Sbjct: 356 EFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALISDT 399



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 29/155 (18%)

Query: 208 LNPGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
           L PG+  K+ +VA GG HT+ L++   V+ +G G  GQLGLG+ I     P ++   EH 
Sbjct: 323 LVPGISGKVNQVACGGGHTVALTEE-DVYTFGLGEFGQLGLGTCIFETSVPKVV---EHL 378

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
              K                     +  +ACG  H+A+++D G + TFG G +G+ G G 
Sbjct: 379 RKQK---------------------IHYVACGENHTALISDTGLMYTFGDGRHGKLGLGE 417

Query: 326 TN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            N  +Q  P+  S+ +   V  +A G  H +  ++
Sbjct: 418 ENFTNQFIPTLCSNFLRFSVHLVACGGCHMLVFAI 452


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGG H+A+VT  G + ++G    G+ GHG  +D   P    SL +  +E +A G 
Sbjct: 307 VQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGE 366

Query: 351 WHTVCISVEGRVYVFGGN--QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G     +G LG G   +  VPK +  P LE      +SCG  H+A
Sbjct: 367 YHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 425

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           V+T  GQ+ ++G   +G LG GD    ++P  +  + G      ACG WHT  + E
Sbjct: 426 VVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVE 481



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 130/303 (42%), Gaps = 53/303 (17%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A GG H  +++  G+V+ WG    G+LG G     VP P LI  L     E  A
Sbjct: 305 LDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSD-VPHPKLIESLSNTNIELVA 363

Query: 267 SGKDRPLLVR-QGSVNSSGKAGRSY-------------------------VKEIACGGRH 300
            G+     V   G + + G    +Y                         V  I+CG  H
Sbjct: 364 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWH 423

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI---- 356
           +AVVT +G L TFG G +G  GHG       P    SL  ++  Q A G+WHT  +    
Sbjct: 424 TAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVM 483

Query: 357 --------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
                      G+++ +G    G+LG G  +++ VP  + T  L+      V+CG   + 
Sbjct: 484 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVT--LDEPNFCQVACGHSMTV 541

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN----IACGWWHTLLLAET 464
            L+  G V + G   YG LG     D  +P+  P+ G L ++    IACG +H  +L   
Sbjct: 542 ALSRLGHVYTMGSCVYGHLG-NTQADGKLPT--PVEGKLSKSFVEEIACGAYHVAVLTSR 598

Query: 465 TQI 467
           T++
Sbjct: 599 TEV 601



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 119/260 (45%), Gaps = 46/260 (17%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT +++  GQ++ +G G  G LG G R K V  P  I  L        
Sbjct: 411 GIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR-KSVSLPREIESL-------- 461

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                         K  R+   + ACG  H+A V +             G L T+G G  
Sbjct: 462 --------------KGLRTV--QAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 505

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG    +L P+   +L +    Q+A G   TV +S  G VY  G   +G LG    
Sbjct: 506 GRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGN--T 563

Query: 379 QAENVPKLLETPI---LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           QA+     L TP+   L     + ++CGA H AVLT   +V +WG    G LG GD+ DR
Sbjct: 564 QADGK---LPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDR 620

Query: 436 NIPSLV-PIHGFLPRNIACG 454
           N P+LV  +     ++IACG
Sbjct: 621 NTPTLVEALKDKQVKSIACG 640



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 8/149 (5%)

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G   D L P    S + + V+ IA G  H   ++ +G V+ +GG   G+LG GVD     
Sbjct: 288 GVKMDSLLPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPH 347

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG---WNKYGQLGLGDSIDRNIPSL 440
           PKL+E+  L +   ++V+CG  H+  +T  G + +WG   +N YG LG G+ +   +P  
Sbjct: 348 PKLIES--LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYN-YGLLGHGNQVSHWVPKR 404

Query: 441 V--PIHGFLPRNIACGWWHTLLLAETTQI 467
           V  P+ G    +I+CG WHT ++  + Q+
Sbjct: 405 VNGPLEGIHVSSISCGPWHTAVVTSSGQL 433



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 69/162 (42%), Gaps = 25/162 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ LS +G V+  G    G LG       +P
Sbjct: 511 GDKESKLVPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLP 570

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           TP                           GK  +S+V+EIACG  H AV+T    + T+G
Sbjct: 571 TP-------------------------VEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWG 605

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  G  GHG TND+  P+   +L D QV+ IA G   T  I
Sbjct: 606 KGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 647



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 151/385 (39%), Gaps = 71/385 (18%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKA 109
           DV    CG   A   ++ G++ +WG    E    L  G   + P P  + +    ++   
Sbjct: 306 DVQNIACGGEHAAMVTKQGEVFSWGG---ESGGRLGHGVDSDVPHPKLIESLSNTNIELV 362

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS--TGKQSALPTEQAPP 167
           A G  H  +VT +G++YTWG          T ++G  G   + S    K+   P E    
Sbjct: 363 ACGEYHTCAVTLSGDLYTWG--------DGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHV 414

Query: 168 SDKRAG---EEVVKRRKTSSAREESENPAS------GDEFFTLSPCLVTLNPGVKITKVA 218
           S    G     VV    TSS +  +    +      GD      P  +    G++  + A
Sbjct: 415 SSISCGPWHTAVV----TSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAA 470

Query: 219 AGGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHA 265
            G  HT  + ++            G+++ WG G +G+LG G +  K+VPT  +       
Sbjct: 471 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVT------ 524

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
               D P                    ++ACG   +  ++  G + T G  +YG  G+  
Sbjct: 525 ---LDEPNFC-----------------QVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQ 564

Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
            + +L       L    VE+IA G +H   ++    V+ +G    G LG G     N P 
Sbjct: 565 ADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPT 624

Query: 386 LLETPILESKRAKVVSCGARHSAVL 410
           L+E   L+ K+ K ++CG   +A +
Sbjct: 625 LVEA--LKDKQVKSIACGTNFTAAI 647


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 131/263 (49%), Gaps = 27/263 (10%)

Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
           LV+    +++ + A G   +L+++  G+V+ WG   +GQLG G   K             
Sbjct: 86  LVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSK------------- 132

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
               + +P L++  +V +        V +I CG  H   +TD G L ++G   YGQ G G
Sbjct: 133 --EEERKPKLMKSLAVCT--------VVQITCGANHCLALTDDGRLFSWGCNKYGQLGLG 182

Query: 325 STND-QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           S++     P     L  I + QIA+G  H+  ++    V+ +G N FGQLG   +  ++ 
Sbjct: 183 SSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSH 242

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVP 442
           P L ++  L +++   +SCG  H+  LT++G V S+G   +GQLG   + +  +P  ++ 
Sbjct: 243 PTLCKS--LRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVME 300

Query: 443 IHGFLPRNIACGWWHTLLLAETT 465
           + G +   +ACG  HT+  + ++
Sbjct: 301 LMGSVISQVACGRRHTVAFSPSS 323



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 111/239 (46%), Gaps = 35/239 (14%)

Query: 233 VWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           V+GWG   +GQL +G S    + +P  +  L+                           +
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELD------------------------I 39

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP----SYASSLMDIQVEQIA 347
           KEI+CG +H+ +VT  G L + G   YG+ GH     +          SSL  +QV Q A
Sbjct: 40  KEISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAA 99

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTG--VDQAENVPKLLETPILESKRAKVVSCGAR 405
            G   ++ I+  G V+ +G N  GQLG G    + E  PKL+++  L       ++CGA 
Sbjct: 100 GGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKS--LAVCTVVQITCGAN 157

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           H   LT+DG++ SWG NKYGQLGLG   S       +V + G     IA G  H+ +L 
Sbjct: 158 HCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILT 216



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 187/459 (40%), Gaps = 109/459 (23%)

Query: 34  EKSPILSPIP-ARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD--DEGQSYLTS-G 89
           E++ ILSP   +RL   D  +  CG      L  ++ GKL + GS +  + G S   S  
Sbjct: 21  EETSILSPKEVSRLQELDIKEISCGEK--HTLIVTKDGKLYSCGSNEYGELGHSKPRSRA 78

Query: 90  KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
              +  E     +   V++AA G    + +T AGEV++WG            D G  G  
Sbjct: 79  VSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWG----------RNDKGQLGR- 127

Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
                GK S                           +EE   P       +L+ C V   
Sbjct: 128 -----GKLS---------------------------KEEERKPKLMK---SLAVCTVV-- 150

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
                 ++  G  H L L+D G+++ WG    GQLGLGS      TP  I CL       
Sbjct: 151 ------QITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIP--- 201

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTN 327
                                + +IA GG HS ++T + A+  FGWG   +GQ G     
Sbjct: 202 ---------------------IAQIASGGNHSFILTWSRAV--FGWGKNSFGQLGLNDEY 238

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D+  P+   SL + +V  I+ G  HTV ++ EG V+ FG   FGQLG    Q E +PK +
Sbjct: 239 DKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRV 298

Query: 388 ETPILESKRAKVVSCGARHSAVLT-EDGQVLSWGWNKYGQLGLGDSIDRNIP-------- 438
               L       V+CG RH+   +   G++ ++G    GQLGLGD+  RN P        
Sbjct: 299 ME--LMGSVISQVACGRRHTVAFSPSSGKMYAFGSGGSGQLGLGDTSARNSPFPILSPNF 356

Query: 439 -------SLVPIHG---FLPRNIACGWWHTLLLAETTQI 467
                  S V  H    +L +++  G  H LLLA   ++
Sbjct: 357 PSTGRRLSQVMDHDGSLYLVKHLYSGGDHCLLLARNAEM 395


>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 620

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 128/268 (47%), Gaps = 40/268 (14%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR------IKMVPT 255
           +P  V +N    IT V  GG H++ L  +G+VW WGY G+G+LG G+          VP 
Sbjct: 197 TPVAVQINALTTITAVDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPV 256

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGR---------------SYVKEIA 295
           P+L   +  +A G+    L   GSV     NS G+ G                  +K I+
Sbjct: 257 PNLTDIIAISAGGEYSIALSSDGSVLTWGANSDGQLGNGNTDQNSVPTKISSLPLMKGIS 316

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHG---STNDQLRPSYASSLMDIQVEQIAAGLWH 352
            G  HS  VT+ G +  +G    GQ G+G   + N  L P     L DI  + + AG   
Sbjct: 317 AGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTDI--DAVCAGATF 374

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARHSAVL 410
           ++ + ++GRV+ +G N  GQLG G +          TP+  +  AK+  V+CG+ HS  +
Sbjct: 375 SLALGIDGRVWAWGLNDEGQLGDGTNTNST------TPVEVTNLAKISAVACGSDHSLAI 428

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
             +G+V SWG N  GQLG G +   + P
Sbjct: 429 -RNGKVKSWGLNDEGQLGDGSTRSSSAP 455



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 127/280 (45%), Gaps = 32/280 (11%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS----------RIKMVPTPHLI 259
           PGV   +++ G  H+L L   G++W WG   +GQLG G+          +I  + T   +
Sbjct: 153 PGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTTITAV 212

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAG------------------RSYVKEIACGGRHS 301
            C    +   D    V     N  G+ G                   + +  I+ GG +S
Sbjct: 213 DCGGDHSMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTDIIAISAGGEYS 272

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
             ++  G++LT+G    GQ G+G+T+    P+  SSL    ++ I+AG  H++ ++ +G 
Sbjct: 273 IALSSDGSVLTWGANSDGQLGNGNTDQNSVPTKISSLP--LMKGISAGEAHSLAVTEDGF 330

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           VY +G N  GQ+G G   A+N P L    +        V  GA  S  L  DG+V +WG 
Sbjct: 331 VYAWGLNDEGQIGNGEKSADN-PVLNPVQVQGLTDIDAVCAGATFSLALGIDGRVWAWGL 389

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
           N  GQLG G + +   P  V     +   +ACG  H+L +
Sbjct: 390 NDEGQLGDGTNTNSTTPVEVTNLAKI-SAVACGSDHSLAI 428



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 39/285 (13%)

Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
           ++  +AG  + ++++  G V TWG       A      G+  + Q     K S+LP  + 
Sbjct: 262 IIAISAGGEYSIALSSDGSVLTWG-------ANSDGQLGNGNTDQNSVPTKISSLPLMKG 314

Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL--VTLNPGVKITKVAAGGRH 223
             + +     V +     +     E      E    +P L  V +     I  V AG   
Sbjct: 315 ISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTDIDAVCAGATF 374

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           +L L   G+VW WG   EGQLG G+      TP  +  L                     
Sbjct: 375 SLALGIDGRVWAWGLNDEGQLGDGTNTNST-TPVEVTNL--------------------- 412

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
                + +  +ACG  HS  + + G + ++G    GQ G GST     P   + L DI  
Sbjct: 413 -----AKISAVACGSDHSLAIRN-GKVKSWGLNDEGQLGDGSTRSSSAPLDVTGLSDIVY 466

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             +AAG  H++ I+ +G +YV+G N  GQLG G +++   PK ++
Sbjct: 467 --VAAGESHSLAITSKGNIYVWGLNGDGQLGDGTNRSSRTPKTID 509



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 2/171 (1%)

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           +I+ G  HS  +   G L  +G    GQ G G+ + Q  P          +  +  G  H
Sbjct: 159 QISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDH 218

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           ++ +   GRV+ +G N  G+LG G  +  +   +       +     +S G  +S  L+ 
Sbjct: 219 SMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTD-IIAISAGGEYSIALSS 277

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           DG VL+WG N  GQLG G++   ++P+ +     + + I+ G  H+L + E
Sbjct: 278 DGSVLTWGANSDGQLGNGNTDQNSVPTKISSLPLM-KGISAGEAHSLAVTE 327


>gi|397486789|ref|XP_003814505.1| PREDICTED: protein RCC2 [Pan paniscus]
          Length = 507

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 132 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 188

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 189 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 226

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 227 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 285

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 286 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 345

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 346 RLGHAEQKDEMVPRLVKLFDF 366



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 161 RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 220

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 221 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 255

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 256 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 315

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 316 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 375

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 376 AGYTCSFAVSEVGGLFFWG 394



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           SC A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   +  + ACG  HTL
Sbjct: 142 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 200

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 201 ALTETGSV 208


>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 567

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 177/431 (41%), Gaps = 98/431 (22%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
           +T+ S  L+ WG  +D GQ    S      P    LP   +V   AAG  H +++T AG 
Sbjct: 50  STAVSEFLLAWGK-NDNGQLGNGSTTGSNVPIAVSLPLGTTVTAVAAGRFHSLALTSAGT 108

Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
           V  WG          T  FG  G    D T                     ++ R     
Sbjct: 109 VLAWG----------TNHFGQLG----DGT---------------------LIDRS---- 129

Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
                            +P  V+L PG  +T VAAGG H++ L+ +G V  WG  G GQL
Sbjct: 130 -----------------APVEVSLPPGTTVTAVAAGGVHSMALTSVGTVLAWGGNGVGQL 172

Query: 245 GLGSRI-KMVPTPHLIP---CLEHAASGKDRPLLVRQG------SVNSSGKAG------R 288
           G GS   +  P   ++P    +   A+ +   L V          +N +G+ G      R
Sbjct: 173 GDGSTTRRTTPVEAILPSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGDGSTINR 232

Query: 289 SY-----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
           S            V  IA G  HS  VT  GA L +G+   GQ G G+T ++  P   + 
Sbjct: 233 STPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQLGDGTTINRSTPVSVAL 292

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV--DQAENVPKLLETPILESK 395
            +  +V  + AG  H+  ++  G    +G N FGQLG G   + +E V   L T    + 
Sbjct: 293 PLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGSNSSEAVEVSLPT---GTT 349

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---- 451
            A + S  + H+  +  DG  L+WG N +GQLG G + + + P  VP+   LP  I    
Sbjct: 350 LAAIASRDSDHTIAIAGDGTALAWGSNIFGQLGDGTTTNPSTP--VPVA--LPTGITLLT 405

Query: 452 -ACGWWHTLLL 461
            A G  HTL L
Sbjct: 406 TAAGSDHTLAL 416



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 127/353 (35%), Gaps = 86/353 (24%)

Query: 40  SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           +P+   L  G +   V  GG   ++A +  G ++ WG  +  GQ    S     TP    
Sbjct: 130 APVEVSLPPGTTVTAVAAGGV-HSMALTSVGTVLAWG-GNGVGQLGDGSTTRRTTPVEAI 187

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           LP+  +V   AA  +H ++VT AG    WG          T   G  GS    ST    A
Sbjct: 188 LPSGVTVTAVAAAESHSLAVTSAGAALAWGLNG-------TGQLGD-GSTINRSTPVSVA 239

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
           LP           G EV                                      T +AA
Sbjct: 240 LP----------LGTEV--------------------------------------TAIAA 251

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQG 278
           G  H+L ++ +G    WGY G GQLG G+ I +  P    +P                  
Sbjct: 252 GRLHSLAVTSVGAALAWGYNGTGQLGDGTTINRSTPVSVALPL----------------- 294

Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
                     + V  +  G  HSA +T AG  L +G   +GQ G+G  ++       S  
Sbjct: 295 ---------GAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGSNSSEAVEVSLP 345

Query: 339 MDIQVEQIAA-GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
               +  IA+    HT+ I+ +G    +G N FGQLG G     + P  +  P
Sbjct: 346 TGTTLAAIASRDSDHTIAIAGDGTALAWGSNIFGQLGDGTTTNPSTPVPVALP 398



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 88/249 (35%), Gaps = 31/249 (12%)

Query: 40  SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           +P+ A L  G +   V       +LA + +G  + WG  +  GQ    S  +  TP    
Sbjct: 182 TPVEAILPSGVTVTAVAAAES-HSLAVTSAGAALAWG-LNGTGQLGDGSTINRSTPVSVA 239

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           LP    V   AAG  H ++VT  G    WG+         T   G       D T    +
Sbjct: 240 LPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNG-------TGQLG-------DGTTINRS 285

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL----------VTLN 209
            P   A P        V  R  +++        A GD  F                V+L 
Sbjct: 286 TPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGSNSSEAVEVSLP 345

Query: 210 PGVKITKVAA-GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIP---CLEH 264
            G  +  +A+    HT+ ++  G    WG    GQLG G+      P P  +P    L  
Sbjct: 346 TGTTLAAIASRDSDHTIAIAGDGTALAWGSNIFGQLGDGTTTNPSTPVPVALPTGITLLT 405

Query: 265 AASGKDRPL 273
            A+G D  L
Sbjct: 406 TAAGSDHTL 414


>gi|432098051|gb|ELK27938.1| Protein RCC2, partial [Myotis davidii]
          Length = 427

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 52  GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHET-- 108

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 109 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 146

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 147 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 205

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 206 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 265

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 266 RLGHAEQKDEMVPRLVKLFDF 286



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 122/306 (39%), Gaps = 54/306 (17%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 81  RNEKGQLGHGDTKRVEAPRLIEGLSHETIVSAACGRNHTLALTETGSVFAFGENKMGQLG 140

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 141 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 175

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 176 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 235

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 236 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 295

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
            G   S  ++E G +  WG     +        + +  L    G+  R++ACG    ++ 
Sbjct: 296 AGYTCSFAVSEVGGLFFWGATNTSR--ESTMYPKTVQDLC---GWRIRSLACGKSSIIVA 350

Query: 462 AETTQI 467
           A+ + I
Sbjct: 351 ADESTI 356



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 92/420 (21%), Positives = 166/420 (39%), Gaps = 78/420 (18%)

Query: 53  KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           + V  G C   +L  +  GKL +WG  +++GQ      K  E P      +  ++V AA 
Sbjct: 56  RTVVSGSCAAHSLLITTEGKLWSWGR-NEKGQLGHGDTKRVEAPRLIEGLSHETIVSAAC 114

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS-ALPTEQAPPSDK 170
           G  H +++TE G V+ +G              G  G       G Q+ A+P+   P    
Sbjct: 115 GRNHTLALTETGSVFAFG----------ENKMGQLG------LGNQTDAVPS---PAQIM 155

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
             G+ + K              A G EF                         ++I+   
Sbjct: 156 YNGQPITKM-------------ACGAEF-------------------------SMIMDCK 177

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G ++ +G    GQLG  S  K +     I   +     +   + + +             
Sbjct: 178 GNLYSFGCPEYGQLGHNSDGKFIARAQRIE-YDCELVPRRVAIFIEKTKDGQILPVPNVV 236

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIA 347
           V+++ACG  H+ V+     + ++G+G YG+ GH    D++ P     L D       QI 
Sbjct: 237 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGASQIY 295

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
           AG   +  +S  G ++ +G     +      ++   PK ++   L   R + ++CG + S
Sbjct: 296 AGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKTVQD--LCGWRIRSLACG-KSS 346

Query: 408 AVLTEDGQVLSWGWN-KYGQLGLGDSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLAE 463
            ++  D   +SWG +  +G+LG GD   ++  +   +  + G     +A G+ H+L++A 
Sbjct: 347 IIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVAMGYSHSLVIAR 406


>gi|355744958|gb|EHH49583.1| hypothetical protein EGM_00270, partial [Macaca fascicularis]
          Length = 427

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 52  GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 108

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 109 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 146

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 147 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 205

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 206 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 265

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 266 RLGHAEQKDEMVPRLVKLFDF 286



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 81  RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 140

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 141 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 175

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 176 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 235

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 236 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 295

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 296 AGYTCSFAVSEVGGLFFWG 314



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           SC A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   +  + ACG  HTL
Sbjct: 62  SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 120

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 121 ALTETGSV 128


>gi|449435009|ref|XP_004135288.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
 gi|449494867|ref|XP_004159669.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 534

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 131/267 (49%), Gaps = 30/267 (11%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPC 261
           P L+    G++I + AAGG  T+++SD G V+ +G    G+   G++  ++V TP L+  
Sbjct: 188 PRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGAQGAQVVTTPKLVES 247

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           L+                          +V + A G   +AV++  G + TF WG   + 
Sbjct: 248 LKDI------------------------FVVQAAIGNFFTAVLSREGTVYTFSWGTDSRL 283

Query: 322 GHGSTNDQLRPS-YASSLMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGTGV 377
           GH +  + L P     +L +I V QIAAG  + + ++       VY  G    G+LG G 
Sbjct: 284 GHHTEPNDLEPRPLKGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGS 343

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
              E  P+L+E   L + +  VV+ GA H+AV+  DG+V +WGW +YG LG G+    + 
Sbjct: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDCESS 403

Query: 438 PSLV-PIHGFLPRNIACGWWHTLLLAE 463
           P +V  +      ++A G + T ++++
Sbjct: 404 PKVVEALINVKAVHVATGDYTTFVVSD 430



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 84/169 (49%), Gaps = 10/169 (5%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT  GA+ +FG    GQ GHG+T +Q  P    SL  I++ Q AAG   T+ IS  
Sbjct: 156 HSIAVTSKGAVYSFGSNSSGQLGHGTTEEQSPPRLIRSLQGIRIIQAAAGGGRTMLISDA 215

Query: 360 GRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           G VY FG + FG+   G   A+ V  PKL+E+  L+       + G   +AVL+ +G V 
Sbjct: 216 GHVYAFGKDSFGEAEYGAQGAQVVTTPKLVES--LKDIFVVQAAIGNFFTAVLSREGTVY 273

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLLA 462
           ++ W    +  LG   + N     P+ G L       IA G+ + L LA
Sbjct: 274 TFSWGTDSR--LGHHTEPNDLEPRPLKGALENIPVVQIAAGYCYLLALA 320



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 173/445 (38%), Gaps = 114/445 (25%)

Query: 53  KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-----VV 107
           K +   G G ++A +  G + ++GS +  GQ       HG T E  P     S     ++
Sbjct: 147 KSMAIAGPGHSIAVTSKGAVYSFGS-NSSGQL-----GHGTTEEQSPPRLIRSLQGIRII 200

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
           +AAAG    + +++AG VY +G                     KDS G            
Sbjct: 201 QAAAGGGRTMLISDAGHVYAFG---------------------KDSFG------------ 227

Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
                               E+E  A G +  T +P LV     + + + A G   T +L
Sbjct: 228 --------------------EAEYGAQGAQVVT-TPKLVESLKDIFVVQAAIGNFFTAVL 266

Query: 228 SDMGQVWGWGYGGEGQLG------------LGSRIKMVPTPHLIP--CLEHAASGKDRPL 273
           S  G V+ + +G + +LG            L   ++ +P   +    C   A +     +
Sbjct: 267 SREGTVYTFSWGTDSRLGHHTEPNDLEPRPLKGALENIPVVQIAAGYCYLLALACHPSGM 326

Query: 274 LVRQGSVNSSGKAGR-SYVKE------------------IACGGRHSAVVTDAGALLTFG 314
            V        GK G  S   E                  +A G  H+AVV   G + T+G
Sbjct: 327 SVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWG 386

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
           WG YG  GHG+ + +  P    +L++++   +A G + T  +S +G VY FG  +   LG
Sbjct: 387 WGRYGCLGHGNEDCESSPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLG 446

Query: 375 TGV----DQAENVPKLLETPILESKRA---KVVSCGAR-------HSAVLTEDGQVLSWG 420
             V    ++    P +L+  ++ S +    +VV            H+  LTE G++ ++G
Sbjct: 447 HNVVLPEEEGNRQPHVLKPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFG 506

Query: 421 WNKYGQLG--LGDSIDRNIPSLVPI 443
               GQLG  L +  +R  P LV I
Sbjct: 507 AGDKGQLGVELANQTERGNPELVDI 531


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 40/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G++I  V+ G  HT +++ MGQ++ +G G  G LG G  +K +  P  +  L        
Sbjct: 183 GLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGD-LKSISCPREVESL-------- 233

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD-----------AGALLTFGWGLYG 319
                          +G   +  +ACG  H+A + +           AG L T+G G   
Sbjct: 234 ---------------SGLKTIA-VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG    +L+P+  +SL+D    ++A G   TV ++  G+V+  G + +GQLG     
Sbjct: 278 RLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNL--N 335

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           ++  P L+E  I  S+    ++CG+ H AVLT   +V +WG    G+LG GD  DR +P+
Sbjct: 336 SDGRPCLVEDKI-ASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPT 394

Query: 440 LV-PIHGFLPRNIACG 454
            V  +     R+IACG
Sbjct: 395 TVEALRDRAVRHIACG 410



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  + CG RH+++VT  G + T+G    G+ GHG+  D + P    SL    ++ +A G 
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGE 138

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  ++  G +Y +G   +  G LG G D    +P+ +  P LE  +   VSCG  H+A
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTA 197

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           ++T  GQ+ ++G   +G LG GD    + P  V  + G     +ACG WHT  + E
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVE 253



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 70/175 (40%), Gaps = 28/175 (16%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G+VW  G    GQLG         
Sbjct: 282 GDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG--------- 332

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                       +   RP LV         K    +V +IACG  H AV+T    + T+G
Sbjct: 333 ----------NLNSDGRPCLVED-------KIASEHVLQIACGSYHVAVLTSRSEVFTWG 375

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
            G  G+ GHG   D+  P+   +L D  V  IA G   T  I +    +V G +Q
Sbjct: 376 KGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAICLHK--WVSGADQ 428


>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cavia porcellus]
          Length = 780

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 139/295 (47%), Gaps = 45/295 (15%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPT 255
           C+  L P  K+   A G  HTLIL+ +G V+  G   EGQLGLG         RI    +
Sbjct: 80  CVKALKPE-KVQFAACGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G + V                 I+
Sbjct: 139 EHNIKQL--SAGSNTSAALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNIGKPISWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L TFG    G+ G       +   P   + + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTMDGELYTFGEPESGKLGLPKELLINHRTPQLVAGIPE-KVIQVACGGGHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E + PK++E   +++++   +SCG  H+A++++
Sbjct: 256 VVLT-EKAVYTFGLGQFGQLGLGTFCFETLEPKVIEQ--IKNQKITYISCGENHTALISD 312

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-----HGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  ++       PI       F  + +ACG   TL+ A
Sbjct: 313 IGLMYTFGDGRHGKLGLG--LENFSNQFFPILCSEFLRFTVQLVACGGCQTLVFA 365



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 90/169 (53%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+AVVT    L  FG   +GQ G GS +D  +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           + ++V G VY  GGN  GQLG G  +  N    + +        K +S G+  SA L+ED
Sbjct: 100 LILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRI-SFFTSEHNIKQLSAGSNTSAALSED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL D I   +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLNDVISVCVPHQVNI-GKPISWISCGYYHSAFVT 206



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 42/255 (16%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           ++ G  HT +++   +++ +G    GQLGLGS+   V  P  +  L        +P    
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSD-VKKPTCVKAL--------KP---- 86

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST---NDQLRPS 333
                         V+  ACG  H+ ++T  G +   G    GQ G G T   N   R S
Sbjct: 87  ------------EKVQFAACGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRIS 134

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
           + +S  +I+  Q++AG   +  +S +GR++++G N  GQ+G     +  VP  +      
Sbjct: 135 FFTSEHNIK--QLSAGSNTSAALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNI---- 188

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS--IDRNIPSLVPIHGFLPR-- 449
            K    +SCG  HSA +T DG++ ++G  + G+LGL     I+   P LV     +P   
Sbjct: 189 GKPISWISCGYYHSAFVTMDGELYTFGEPESGKLGLPKELLINHRTPQLV---AGIPEKV 245

Query: 450 -NIACGWWHTLLLAE 463
             +ACG  HT++L E
Sbjct: 246 IQVACGGGHTVVLTE 260



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 31/50 (62%)

Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
           F TL P ++      KIT ++ G  HT ++SD+G ++ +G G  G+LGLG
Sbjct: 281 FETLEPKVIEQIKNQKITYISCGENHTALISDIGLMYTFGDGRHGKLGLG 330


>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
           GTPase regulator, partial [Callithrix jacchus]
          Length = 817

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 139/293 (47%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPT 255
           C+  L P  K+   A G  HTL+ ++ G V+  G   EGQLGLG         R+    +
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       L   G +     NS G+ G   +                 I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNACVPHQVTIGKPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  +   ++   P     + + +V Q+A G  H+
Sbjct: 197 CGYYHSAFVTTDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPE-KVIQVACGGEHS 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E + PK++E   + +K    +SCG  H+A+LT+
Sbjct: 256 VVLT-EDAVYTFGLGQFGQLGLGTLLFETSEPKVVEN--IGNKTISYISCGENHAALLTD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSL-VPIHGFLPRNIACGWWHTLLLA 462
           +G + ++G  ++G+LGLG  +  ++  P+L      F+ + +ACG  H ++ A
Sbjct: 313 NGLMYTFGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACGGCHMVVFA 365



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 88/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G D  E       +      + K +S G+  SA LTED
Sbjct: 100 LVSTEGGNVYATGGNDEGQLGLG-DTEERTTFHRVSFFTSQHKIKQLSAGSNTSAALTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL + ++  +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLPNILNACVPHQVTI-GKPVSWISCGYYHSAFVT 206



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 44/256 (17%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           ++ G  H+ +++   +++ +G    GQLGLGS+   V  P  +  L        +P    
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSK-SAVSKPTCVKAL--------KP---- 86

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL---RPS 333
                         VK  ACG  H+ V T+ G +   G    GQ G G T ++    R S
Sbjct: 87  ------------EKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVS 134

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
           + +S   I+  Q++AG   +  ++ +GR++++G N  GQ+G        +P +L   +  
Sbjct: 135 FFTSQHKIK--QLSAGSNTSAALTEDGRLFMWGDNSEGQIG--------LPNILNACVPH 184

Query: 394 S----KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN--IPSLVPIHGFL 447
                K    +SCG  HSA +T DG++  +G ++ G+LGL + +  N  IP LVP     
Sbjct: 185 QVTIGKPVSWISCGYYHSAFVTTDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPEK 244

Query: 448 PRNIACGWWHTLLLAE 463
              +ACG  H+++L E
Sbjct: 245 VIQVACGGEHSVVLTE 260


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 2987 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3029

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 3030 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3081

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  NV      
Sbjct: 3082 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIER 3141

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 3142 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3199

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 3200 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3259

Query: 457  HTL 459
            H++
Sbjct: 3260 HSV 3262



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            SP L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG GSR      +++ 
Sbjct: 3967 SPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIE 4026

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   +  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 4027 SLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4086

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 4087 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4146

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 4147 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4204

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 4205 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4254



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 119/273 (43%), Gaps = 28/273 (10%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 412 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 470

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 471 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 510

Query: 318 YGQCGHG--STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           Y +  HG  + N+ L             +        T+     G+V+ +G   +G+LG 
Sbjct: 511 YXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGR 570

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G       PKL+E   L+      V CG++ S  LT+DGQV SWG     +LG G     
Sbjct: 571 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 628

Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
             P L+  + G    ++A G  H L L E +++
Sbjct: 629 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 661



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 131/315 (41%), Gaps = 57/315 (18%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 3982 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGA 4041

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 4042 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4085

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 4086 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4128

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 4129 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4180

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 4181 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4238

Query: 393  ESKRAKVVSCGARHS 407
            + K+   V+CG+ H+
Sbjct: 4239 QGKKVNRVACGSAHT 4253



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 29/219 (13%)

Query: 195  GDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
            GD    L P +V +  G ++ +VA G R   TL L+D G V+ WG G  G+LG G     
Sbjct: 3074 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG----- 3128

Query: 253  VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
                         + G + P  + +  +N  G      V +I CG + S  +T +G + T
Sbjct: 3129 ------------GSEGCNVPQNIER--LNGQG------VCQIECGAQFSLALTKSGVVWT 3168

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G G Y + GHGS     +P     L   ++  +A G  H + ++  G+VY +G N  GQ
Sbjct: 3169 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3228

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
             G G       P L++   LE ++   V+CG+ HS   T
Sbjct: 3229 QGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAWT 3265



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 3943

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 3944 GKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4003

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHGS +   RP    SL  ++V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 4004 GEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4063

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 4064 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4121

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 4122 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4155



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 37/262 (14%)

Query: 211  GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASG 268
            G  I K AAG   T  +    +V+ WG   + QLG   GS+IK       +P      S 
Sbjct: 2881 GSLIRKKAAGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSA 2931

Query: 269  KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
             +                    V ++A G +    VT  G +   G    G+ G G ++ 
Sbjct: 2932 LN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG 2971

Query: 329  QL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
             +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + P+
Sbjct: 2972 TVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 3031

Query: 386  LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-H 444
            L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +  
Sbjct: 3032 LIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 3089

Query: 445  GFLPRNIACGWWHTLLLAETTQ 466
            G     +ACG      LA T +
Sbjct: 3090 GHRVIQVACGSRDAQTLALTDE 3111



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 54  DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           DV    CG  F++A ++ G++ +WG  D++   + T  +H   P+         V+  AA
Sbjct: 589 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 647

Query: 112 GWAHCVSVTEAGEVYTWG 129
           G  HC+++TE  EV++WG
Sbjct: 648 GSTHCLALTEDSEVHSWG 665



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 4145 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4203

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 4204 CTEDGEVYTWG 4214



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
            LA S  G++ +WG A+D G+    S    + P          VV  AAG AH   VT AG
Sbjct: 3992 LALSSEGEVYSWGEAED-GKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAG 4050

Query: 124  EVYTWG 129
            ++YTWG
Sbjct: 4051 DLYTWG 4056


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 127/306 (41%), Gaps = 81/306 (26%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            V+   V+  GRH L ++  G+V+ WG G  GQLG GS                     DR
Sbjct: 3012 VRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGS-----------------LQSYDR 3054

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P ++              +++E++CG  HSA V+  G L T+G G  G+ GHG +N+Q +
Sbjct: 3055 PKMIEIFQAK--------HIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTK 3106

Query: 332  PSYASSLMDIQVE----------------------------------------------- 344
            P    +L  +++                                                
Sbjct: 3107 PKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVPVQVIT 3166

Query: 345  ------QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
                  QI  G+  +V ++ EG+VY +G  ++ +LG      + +P L++   L SK   
Sbjct: 3167 FPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDG--LASKTIT 3224

Query: 399  VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWH 457
             V+ GA H   LT  G+V SWG N++GQ G   +I    P +V  + G     IACG  H
Sbjct: 3225 QVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVASLKGHRICKIACGSSH 3284

Query: 458  TLLLAE 463
            ++  A+
Sbjct: 3285 SIAFAQ 3290



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 35/270 (12%)

Query: 202  SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVPTPHLI 259
            S  L  L+P     + A G + + ++SD G+V+  G G  G+LG+G  + I+M   PH I
Sbjct: 2952 SRTLARLHP----IQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRM---PHQI 3004

Query: 260  PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
              L           +VR+ +V              +C GRH   VT  G + ++G G YG
Sbjct: 3005 SSLSM--------YVVRKVAV--------------SCAGRHVLAVTADGKVFSWGDGQYG 3042

Query: 320  QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
            Q GHGS     RP          + +++ G  H+  +SV G ++ +G    G+LG G   
Sbjct: 3043 QLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSN 3102

Query: 380  AENVPKLLETPILESKRAKVVSCGARHSAVLTE-DGQVLSWGWNKYGQLGLGD-SIDRNI 437
             +  PKL+    LE  R   V+CG+R++  L   D  + +WG   +G+LGL D S   ++
Sbjct: 3103 NQTKPKLVRA--LEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDV 3160

Query: 438  PSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
            P  V         I CG   ++LL +  ++
Sbjct: 3161 PVQVITFPSNIIQIECGMHFSVLLTKEGKV 3190



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 133/303 (43%), Gaps = 43/303 (14%)

Query: 194  SGDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
            S D   T +P       G+ + K+A  +GG+H L ++  G+++ WG G +G+LGLG+ + 
Sbjct: 3903 SSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVN 3962

Query: 252  MVPTPHLIPCLE------------HAASGKDRPLLVRQGSVNSSGKAGR----------- 288
            M   PHLI  L+            H+A   D   L   G     G+ GR           
Sbjct: 3963 M-NVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGK----GRYGRLGHNDHETQHK 4017

Query: 289  ---------SYVKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
                       V  +ACG     +   T +G + ++G G YG+ G G       P    S
Sbjct: 4018 PKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDS 4077

Query: 338  LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
            L    V ++  G   ++ ++  G VY +G   + +LG G D  +  P+ +   +L  +  
Sbjct: 4078 LTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRV-LGLLAHENV 4136

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWW 456
              + CG+ H  V TE G+V SWG N  GQ+G   +   ++P  + I       ++ACG  
Sbjct: 4137 IDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPKRINITDNICIDHVACGSA 4196

Query: 457  HTL 459
            H++
Sbjct: 4197 HSI 4199



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 116/250 (46%), Gaps = 29/250 (11%)

Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
           G H L L+  G+V+ WG G  G LG+G+           P    A SG DR         
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIGN-----TESQTAPTAVAALSG-DR--------- 561

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
                     +  I+ G  HSA VT+ G L T+G G YG+ GHG+  D+L P+    L  
Sbjct: 562 ----------IVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNG 611

Query: 341 IQVEQI--AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
           +++ Q+   +G  HT+ +   G+V+ +G   +G+LG        VPK +      S   K
Sbjct: 612 VKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVK 671

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWH 457
           ++ CG + S  LT+DG++ SWG     QLG G+      P L+  +   +  +++ G  H
Sbjct: 672 II-CGNQISMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQH 730

Query: 458 TLLLAETTQI 467
            + L   + +
Sbjct: 731 CVALTTDSDV 740



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 33/245 (13%)

Query: 201  LSPCLVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHL 258
            L   L  LNP +       GG  TL  ++D G+V+  GY   G+LG+GS   +  PTP  
Sbjct: 3860 LCESLSELNPAM-----ITGGEQTLFAVTDDGKVYASGYAAHGRLGIGSSDNVATPTP-- 3912

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
                    S   R + V++ +++S              GG+H   VT  G L  +G G  
Sbjct: 3913 ------LTSLATRGIAVKKIAIHS--------------GGKHCLAVTTQGELYAWGEGED 3952

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ G G+T +   P    SL    V     G  H+ CI+ +G +Y +G  ++G+LG    
Sbjct: 3953 GKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDH 4012

Query: 379  QAENVPKLLETPILESKRAKVVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + ++ PKL+    L+ ++   V+CG+  +  L  T  G V SWG   YG+LG G +    
Sbjct: 4013 ETQHKPKLVSA--LKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSK 4070

Query: 437  IPSLV 441
            +P  +
Sbjct: 4071 VPKKI 4075



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 161/420 (38%), Gaps = 84/420 (20%)

Query: 22   VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGG-CGFALATSESGKLITWG 76
            V++WG       GT   ++ + SPI +R           GG  C F +  S+ GK+   G
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVV--SDDGKVFACG 2983

Query: 77   SADDEGQS-YLTSGKHGETPEPFPLPTEASVV--KAAAGWA--HCVSVTEAGEVYTWGWR 131
                EG S  L  G       P  + + +  V  K A   A  H ++VT  G+V++WG  
Sbjct: 2984 ----EGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWG-- 3037

Query: 132  ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
                       +G  G     S  +   +   QA              R+ S     S  
Sbjct: 3038 --------DGQYGQLGHGSLQSYDRPKMIEIFQAK-----------HIREVSCGTGHSAA 3078

Query: 192  PASGDEFFT-----------------LSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQ 232
             +   E FT                   P LV     V+I+ VA G R  HTL   D   
Sbjct: 3079 VSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGD-NS 3137

Query: 233  VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
            +W WG G  G+LGL                +  +S  D P+ V     N         + 
Sbjct: 3138 LWAWGDGSFGKLGL----------------KDGSSSTDVPVQVITFPSN---------II 3172

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            +I CG   S ++T  G + T+G G Y + G+ ST+ Q  P+    L    + Q+A G  H
Sbjct: 3173 QIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALH 3232

Query: 353  TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
             + ++  G VY +G N+ GQ G         P+++ +  L+  R   ++CG+ HS    +
Sbjct: 3233 CLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVAS--LKGHRICKIACGSSHSIAFAQ 3290



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 129/325 (39%), Gaps = 55/325 (16%)

Query: 98  FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
           FP   E   +       H +++T+ G+VY+WG              GS G     +T  Q
Sbjct: 502 FPGDEEIIQIDHNPSGNHILALTKDGKVYSWGQ-------------GSNGVLGIGNTESQ 548

Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVT 207
           +A PT  A  S  R          +++  E+                G+    L P +V 
Sbjct: 549 TA-PTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVE 607

Query: 208 LNPGVKITKV--AAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPCLEH 264
              GVKI +V   +G  HTL L D GQVW WG G  G+LG  GS    VP P        
Sbjct: 608 GLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKP-------- 659

Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
                             SG    S V +I CG + S  +T  G L ++G G   Q GHG
Sbjct: 660 -----------------ISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQLGHG 702

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
           +     +P     L +  V  ++ G  H V ++ +  VY +G N   ++    D   + P
Sbjct: 703 NQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKNSSFEVNESGDIISS-P 761

Query: 385 KLLETPILESKRAKVVSCGARHSAV 409
            ++E      K A +++CGA  + V
Sbjct: 762 LMIEAA--SGKGALLIACGASETFV 784



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 4/164 (2%)

Query: 299  RHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVC 355
            R   + TD      F WGL    Q G   +  +++ P  + +L  +   Q A G   +  
Sbjct: 2913 RLDLLSTDTHGNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFV 2972

Query: 356  ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
            +S +G+V+  G    G+LG G      +P  + +  +   R   VSC  RH   +T DG+
Sbjct: 2973 VSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGK 3032

Query: 416  VLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHT 458
            V SWG  +YGQLG G     + P ++ I      R ++CG  H+
Sbjct: 3033 VFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHS 3076



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 4/134 (2%)

Query: 312  TFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
             FGWG    GQ G    N    P    SL ++    I  G      ++ +G+VY  G   
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYAA 3895

Query: 370  FGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQL 427
             G+LG G       P  L +        K ++   G +H   +T  G++ +WG  + G+L
Sbjct: 3896 HGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKL 3955

Query: 428  GLGDSIDRNIPSLV 441
            GLG +++ N+P L+
Sbjct: 3956 GLGTTVNMNVPHLI 3969



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 5/101 (4%)

Query: 29  PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
           PG+   K P   PI          K +CG     AL  ++ GKL +WG  D     +  +
Sbjct: 649 PGSDQNKVP--KPISGIGSTSPVVKIICGNQISMAL--TKDGKLYSWGCGDTYQLGH-GN 703

Query: 89  GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
            +H   P+     +E  V   + G  HCV++T   +VY WG
Sbjct: 704 QEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744



 Score = 42.0 bits (97), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 15/98 (15%)

Query: 40   SPIPAR---LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK----HG 92
            S +P +   L G    K +CG    F++A + +G + TWG  D     Y   G     H 
Sbjct: 4069 SKVPKKIDSLTGKHVIKLLCGSQ--FSMALTTAGHVYTWGKGD-----YYRLGHGDDSHQ 4121

Query: 93   ETPEP-FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
             TP     L    +V+    G  HC+  TE+G+V++WG
Sbjct: 4122 RTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWG 4159


>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2041

 Score =  104 bits (260), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 27/223 (12%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+   ++AAG  H+L L+   QV+GWG    GQLG+G+                    K+
Sbjct: 349 GLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGN--------------------KE 388

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
             LL +Q +     K    Y   + CG +HSA +T    L T+G G Y + GHG   D++
Sbjct: 389 NQLLPKQLTFFDRKKIQCQY---LYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEM 445

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN--VPKL-- 386
            P     L D+ V  +A G  H++CI+ EG VY +G ++   LG    Q ++  +P+   
Sbjct: 446 EPKKIEILQDVYVLDVALGTIHSLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVG 505

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
           L +          V+ G  HS  L+E+G +  WG NK   LG+
Sbjct: 506 LMSQSFRDASFYQVAAGTSHSLSLSENGHLYVWGSNKNSLLGV 548



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 3/175 (1%)

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
           + +VK I CG  H+  +T+ GA+  +G G  G  G+G  +D   P+    +  +   +IA
Sbjct: 299 QEFVK-IVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQID-ISGLFFNEIA 356

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
           AG +H++ ++   +VY +G N  GQLG G  + + +PK L     +  + + + CG +HS
Sbjct: 357 AGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHS 416

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLL 461
           A +T + ++ +WG   Y +LG G  +D   P  + I       ++A G  H+L +
Sbjct: 417 ACITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSLCI 471



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 80/351 (22%), Positives = 139/351 (39%), Gaps = 50/351 (14%)

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSAL--PTEQAPPSD 169
            + HC++VT  G  Y WG          +  +   G  FQ D       L    EQ     
Sbjct: 697  YNHCIAVTAKGNAYCWG----------SNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIM 746

Query: 170  KRAGEE---VVKRRKTSSAREESENPASGDE----FFTLSPCLVTLNPGVKITKVAAGGR 222
               GE+   ++  +    +   SE    G E    +  + P ++   P   +  +A   +
Sbjct: 747  AITGEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDIP--SMINLACSNQ 804

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLG-----SRIKMVPTPHLIP-CLEHAASGK-----DR 271
                +    Q+W WG    GQLG+        I +     +    LE  A  K     +R
Sbjct: 805  TMFAIDQKQQLWAWGNNQFGQLGISLQRDEEEINLQTNKQVSSEFLEWKAQLKSLKNPER 864

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-- 329
             ++ +    ++    G ++V +++CG  H+ ++T    LLT G   Y   GH S   +  
Sbjct: 865  YIVYQPDKPSTRSITGEAFVDQVSCGLYHTCIITTNQELLTCGLAKYA--GHQSQEPEDP 922

Query: 330  ---------LRPSYASSL--MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
                        +++S+L     + + +A   +HTV ++V   + VF G +  + G    
Sbjct: 923  EQQQAQQAQFIDAFSSTLEHSSKKFKLVACHEYHTVAVTVSSDL-VFLGPEGKERGLHEK 981

Query: 379  QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
             A       + P+ E +  K V+CG  H+ +L + GQ  +WG    G+LGL
Sbjct: 982  FANLFRDGKQMPV-ELQNIKFVACGPNHALILNDQGQTYTWGATMGGRLGL 1031



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 82/386 (21%), Positives = 157/386 (40%), Gaps = 44/386 (11%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTE----ASVVKAAAGWAHCV 117
           +L  +  G +  WGS+ D      T     +T P+   L ++    AS  + AAG +H +
Sbjct: 468 SLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSL 527

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
           S++E G +Y WG       +      G     Q+ +   Q     EQ+   +K   E+ +
Sbjct: 528 SLSENGHLYVWG-------SNKNSLLGVRLQGQEHTCVPQK---VEQSEDLEKSCIEKAL 577

Query: 178 --KRRKTSSAREESENPASGDEFFTLSPCLVTLNPG----VKITKVAAGGRHTLILSDMG 231
               +K      + E   + ++  TL   ++    G     K      G ++T  + + G
Sbjct: 578 FFNLKKEEQQMMKDEKLVTFEQT-TLMKTILQSTMGQSHECKYKFATLGTKNTYFIDNTG 636

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA--GRS 289
            ++  G   +G L           PH     +     KD P ++ + S           +
Sbjct: 637 HLYACGSNQKGML--------CKNPHKKQKFKQFIPQKDPPDILFEQSFTPIEIVYFRNT 688

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ---- 345
            ++ I+C   H   VT  G    +G   Y Q G G  +D +   +   L++  +EQ    
Sbjct: 689 IIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHV---FTPILLEGAIEQKVII 745

Query: 346 -IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCG 403
               G   +  ++ +G V+ FG ++FG LG    + +N   ++E  ++    + + ++C 
Sbjct: 746 MAITGEKFSALLTDQGEVWSFGTSEFGVLG---HELKNFYVIMEPRMINDIPSMINLACS 802

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGL 429
            +    + +  Q+ +WG N++GQLG+
Sbjct: 803 NQTMFAIDQKQQLWAWGNNQFGQLGI 828



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 377 VDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           ++QAE N    ++   L+ +  K+V CG  H+  LTE+G V  WG    G LG G   D 
Sbjct: 281 LNQAEPNNSDFIQPIALKQEFVKIV-CGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDL 339

Query: 436 NIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
             P+ + I G     IA G +H+L LA+  Q+
Sbjct: 340 ETPTQIDISGLFFNEIAAGAYHSLALAKNNQV 371



 Score = 42.0 bits (97), Expect = 0.64,   Method: Composition-based stats.
 Identities = 92/460 (20%), Positives = 157/460 (34%), Gaps = 84/460 (18%)

Query: 33  PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
           P  S  + PI  +    +  K VCG      +A +E G +  WG      Q  L +G+  
Sbjct: 286 PNNSDFIQPIALK---QEFVKIVCGHH--HTMALTEEGAVFIWGMGS---QGCLGNGRVD 337

Query: 93  ETPEPFPLPTEASVV-KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
           +   P  +        + AAG  H +++ +  +VY WG            + G  G   K
Sbjct: 338 DLETPTQIDISGLFFNEIAAGAYHSLALAKNNQVYGWG----------VNNRGQLGIGNK 387

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA----REESENPASGDEFF-------- 199
           ++      LP +      K+   + +      SA     +E     +GD +         
Sbjct: 388 EN----QLLPKQLTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLD 443

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG----------LGSR 249
            + P  + +   V +  VA G  H+L +++ G V+ WG   +  LG          L  R
Sbjct: 444 EMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQR 503

Query: 250 IKMVPTPHLIPCLEHAASGKDRPL-LVRQGSVNSSGKAGRSYVKEIACGGRHSAV----- 303
           + ++            A+G    L L   G +   G    S +     G  H+ V     
Sbjct: 504 VGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVWGSNKNSLLGVRLQGQEHTCVPQKVE 563

Query: 304 ----VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA----------- 348
               +  +       + L  +      +++L     ++LM   ++               
Sbjct: 564 QSEDLEKSCIEKALFFNLKKEEQQMMKDEKLVTFEQTTLMKTILQSTMGQSHECKYKFAT 623

Query: 349 -GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE-------------TPI--- 391
            G  +T  I   G +Y  G NQ G L     + +   + +              TPI   
Sbjct: 624 LGTKNTYFIDNTGHLYACGSNQKGMLCKNPHKKQKFKQFIPQKDPPDILFEQSFTPIEIV 683

Query: 392 -LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
              +   + +SC   H   +T  G    WG N+Y QLGLG
Sbjct: 684 YFRNTIIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLG 723


>gi|291414169|ref|XP_002723335.1| PREDICTED: regulator of chromosome condensation 2 [Oryctolagus
           cuniculus]
          Length = 560

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 185 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 241

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 242 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 279

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++    +G +Y FG  ++GQLG   D         
Sbjct: 280 AV-PSPAQIMYNGQPITKMACGAEFSMITDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 338

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 339 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 398

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 399 RLGHAEQKDEMVPRLVKLFDF 419



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 121/307 (39%), Gaps = 56/307 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 214 RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 273

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S +  
Sbjct: 274 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMITD 308

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 309 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 368

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 369 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 428

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLL 460
            G   S  ++E G +  WG     +           P  V  + G+  R++ACG    ++
Sbjct: 429 AGYTCSFAVSEVGGLFFWGATNTSRE------STMYPKAVQDLCGWRIRSLACGKSSIIV 482

Query: 461 LAETTQI 467
            A+ + I
Sbjct: 483 AADESTI 489



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 29/204 (14%)

Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
           P V +  VA G  HTL+L    +V+ WG+GG G+LG   + K    P L+   +    G 
Sbjct: 366 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDFPGRG- 423

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                                  +I  G   S  V++ G L  F WG      + S    
Sbjct: 424 ---------------------ASQIYAGYTCSFAVSEVGGL--FFWG----ATNTSREST 456

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
           + P     L   ++  +A G    +  + E  +       FG+LG G  + ++     E 
Sbjct: 457 MYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEV 516

Query: 390 PILESKRAKVVSCGARHSAVLTED 413
             L+   ++ V+ G  HS V+  D
Sbjct: 517 KTLDGIFSEQVAMGYSHSLVIARD 540



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 392 LESKRAKVVSCG--ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
           L   R + V  G  A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   + 
Sbjct: 183 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 242

Query: 449 RNIACGWWHTLLLAETTQI 467
            + ACG  HTL L ET  +
Sbjct: 243 VSAACGRNHTLALTETGSV 261


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 122/272 (44%), Gaps = 51/272 (18%)

Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           FT+ P L  L+ GV I ++AAG  H + ++D G+++ WG    GQL L S I     P  
Sbjct: 110 FTIYPVL--LSGGVNIVQIAAGRAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKR 167

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           +  L                              ++ACG  H+  + ++G +  F WGL 
Sbjct: 168 VVSLTETV--------------------------QVACGTDHTIAIVESGRI--FVWGLQ 199

Query: 319 --GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
             G+  +        P      M + V Q+ AG  + V ++V G ++V+G N++GQLGT 
Sbjct: 200 PDGRVLYA-------PKEIEFFMALPVVQVNAGSDYYVALTVSGAMFVWGSNEYGQLGTS 252

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            ++    P   E   L S     V+CG  H+  LT +G++   G +  GQLG G    R 
Sbjct: 253 DNKERTTPA--EVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDSCGQLGSG----RK 306

Query: 437 IPS------LVPIHGFLPRNIACGWWHTLLLA 462
           +PS      +  + G     +ACG  HTL LA
Sbjct: 307 VPSQNTMLAVTEMLGTHVTRVACGRCHTLALA 338



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 114/279 (40%), Gaps = 69/279 (24%)

Query: 232 QVWGWGYGGEGQLG-----LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           Q++ +GYGG+GQLG      G    +V TP ++     +  G                  
Sbjct: 26  QLYAFGYGGDGQLGNRGFLNGDDGNIVKTPQVVVGAPTSHDGVS---------------- 69

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM-DIQVEQ 345
               V+ IA G RH+  + D G + + G    G+ G G   +     Y   L   + + Q
Sbjct: 70  ----VRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVNIVQ 125

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLG-----TGVDQAENVPKLLET----------- 389
           IAAG  H + ++ +GR++ +G N  GQL      T  D  + V  L ET           
Sbjct: 126 IAAGRAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVSLTETVQVACGTDHTI 185

Query: 390 PILESKRAKV--------------------------VSCGARHSAVLTEDGQVLSWGWNK 423
            I+ES R  V                          V+ G+ +   LT  G +  WG N+
Sbjct: 186 AIVESGRIFVWGLQPDGRVLYAPKEIEFFMALPVVQVNAGSDYYVALTVSGAMFVWGSNE 245

Query: 424 YGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLL 461
           YGQLG  D+ +R  P+ V  +H     ++ACG  HT+ L
Sbjct: 246 YGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVAL 284



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 140/372 (37%), Gaps = 64/372 (17%)

Query: 43  PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
           P  L GG +   +  G     +A ++ G+L  WGS +  GQ  L S     T  P  + +
Sbjct: 114 PVLLSGGVNIVQIAAGR-AHNMAVADDGRLFAWGS-NSHGQLALPSNI-TSTDIPKRVVS 170

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
               V+ A G  H +++ E+G ++ WG +   P  +V         F         ALP 
Sbjct: 171 LTETVQVACGTDHTIAIVESGRIFVWGLQ---PDGRVLYAPKEIEFFM--------ALPV 219

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAR-----EESENPASGDEFFTLSPCLVTLNPGVKITKV 217
            Q       AG +       S A       E     + D     +P  VT    + +  V
Sbjct: 220 VQV-----NAGSDYYVALTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHV 274

Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
           A G  HT+ L+  G+++  G    GQLG G +   VP+                     Q
Sbjct: 275 ACGHSHTVALTHEGRLFVCGSDSCGQLGSGRK---VPS---------------------Q 310

Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
            ++ +  +   ++V  +ACG  H+  +   G +  FG    GQ G G+   Q+ P    +
Sbjct: 311 NTMLAVTEMLGTHVTRVACGRCHTLALA-GGKMYAFGLNSSGQLGSGNVRSQVTPRPIDA 369

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           L D  V  + AG   + CI  +            +L +    A   PK L    L+    
Sbjct: 370 LTD--VVSVFAGWDQSFCIQSKNE---------EELSSATSYALQTPKFLSLRRLQ---- 414

Query: 398 KVVSCGARHSAV 409
           +V + G + S +
Sbjct: 415 EVFNSGDKLSVI 426


>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 418

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 126/278 (45%), Gaps = 43/278 (15%)

Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           F+  P LV L+  V++  VAAG  HTL +   G VW +G    GQLG G+    +P    
Sbjct: 107 FSPEPMLVRLD--VEVVSVAAGNGHTLCVDVDGCVWAFGKNTAGQLGTGNVDGTIPR--- 161

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
                                + +  K  R  V ++ACG  HS  V D G + ++G    
Sbjct: 162 --------------------KIGALAKEAR--VAQVACGAEHSLAVADDGRVYSWGSSTD 199

Query: 319 GQCGHGST--ND---------QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G  GHGS   ND         +L P    SL D +V  +AAG  H+ CI   G +Y +G 
Sbjct: 200 GVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRGNLYTWGQ 259

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
            +F QLG     +++  +   +P++  +    ++CG  HS   T  G V+SWG N++G+L
Sbjct: 260 GRFNQLGLSAKPSDH--ETTPSPVMSLRFVHEIACGGLHSLANTNAG-VVSWGANQHGEL 316

Query: 428 GLG--DSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           G G    I   +P  + +       +A GW H+  +A 
Sbjct: 317 GHGHHSDIKSAVPKPIKMGSRGWSKLAAGWKHSAGIAN 354



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 116/261 (44%), Gaps = 42/261 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +  VAAGG H++ L   G V+  G   +GQLG  + +   P                 
Sbjct: 67  LDVRAVAAGGAHSVFLVAGGHVFTCGLNADGQLGHSAGLPFSP----------------E 110

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P+LVR              V  +A G  H+  V   G +  FG    GQ G G+ +  + 
Sbjct: 111 PMLVRL----------DVEVVSVAAGNGHTLCVDVDGCVWAFGKNTAGQLGTGNVDGTIP 160

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-----------QA 380
               +   + +V Q+A G  H++ ++ +GRVY +G +  G LG G +           +A
Sbjct: 161 RKIGALAKEARVAQVACGAEHSLAVADDGRVYSWGSSTDGVLGHGSETWNDGWFYRTARA 220

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIP 438
           E  P+L+ +  LE K+   V+ G  HSA + + G + +WG  ++ QLGL    S     P
Sbjct: 221 ELAPRLVRS--LEDKKVVAVAAGHMHSACIDDRGNLYTWGQGRFNQLGLSAKPSDHETTP 278

Query: 439 SLVPIHGFLPRNIACGWWHTL 459
           S V    F+   IACG  H+L
Sbjct: 279 SPVMSLRFV-HEIACGGLHSL 298



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 36/267 (13%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           ++ +VA G  H+L ++D G+V+ WG   +G LG GS                 A  +  P
Sbjct: 171 RVAQVACGAEHSLAVADDGRVYSWGSSTDGVLGHGSETWN------DGWFYRTARAELAP 224

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS--TNDQL 330
            LVR              V  +A G  HSA + D G L T+G G + Q G  +  ++ + 
Sbjct: 225 RLVRS--------LEDKKVVAVAAGHMHSACIDDRGNLYTWGQGRFNQLGLSAKPSDHET 276

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            PS   SL    V +IA G  H++  +  G V  +G NQ G+LG G     ++   +  P
Sbjct: 277 TPSPVMSLR--FVHEIACGGLHSLANTNAG-VVSWGANQHGELGHG--HHSDIKSAVPKP 331

Query: 391 ILESKRA-KVVSCGARHSAVLTEDGQVLSWGW------------NKYGQLGLGDSIDRNI 437
           I    R    ++ G +HSA +  +G++ +WG+            +  GQLGLG+  D   
Sbjct: 332 IKMGSRGWSKLAAGWKHSAGIA-NGKLFAWGFGGSMGSYADEKMSSGGQLGLGNEFDFWE 390

Query: 438 PSLVPIHGFLPRNIACGWWHTLLLAET 464
           P  V + G + ++++CG+ HTL L +T
Sbjct: 391 PHEVSVPGEV-KDVSCGFNHTLALVDT 416



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 19/170 (11%)

Query: 311 LTFGWGLYGQCGHGS---TNDQLRPSYASSLM------DIQVEQIAAGLWHTVCISVEGR 361
           L+ G G +G+ GHGS    +D   P  ++         D+ V  +AAG  H+V +   G 
Sbjct: 28  LSAGNGDHGRLGHGSPDEAHDGWSPRSSNYFHPVEGVSDLDVRAVAAGGAHSVFLVAGGH 87

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS--CGARHSAVLTEDGQVLSW 419
           V+  G N  GQLG     +  +P   E P+L     +VVS   G  H+  +  DG V ++
Sbjct: 88  VFTCGLNADGQLG----HSAGLPFSPE-PMLVRLDVEVVSVAAGNGHTLCVDVDGCVWAF 142

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAETTQI 467
           G N  GQLG G+ +D  IP  +       R   +ACG  H+L +A+  ++
Sbjct: 143 GKNTAGQLGTGN-VDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRV 191


>gi|355557600|gb|EHH14380.1| hypothetical protein EGK_00297, partial [Macaca mulatta]
          Length = 427

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 52  GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 108

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 109 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 146

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 147 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 205

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 206 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 265

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 266 RLGHAEQKDEMVPRLVKLFDF 286



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 81  RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 140

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 141 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 175

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 176 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 235

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 236 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 295

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 296 AGYTCSFAVSEVGGLFFWG 314



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           SC A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   +  + ACG  HTL
Sbjct: 62  SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 120

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 121 ALTETGSV 128


>gi|330797026|ref|XP_003286564.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
 gi|325083469|gb|EGC36921.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
          Length = 1440

 Score =  104 bits (260), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 80/273 (29%), Positives = 124/273 (45%), Gaps = 44/273 (16%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDR 271
           ++  V+ G  HTL+L+   +++  G+   GQLG+ + +   VP P               
Sbjct: 75  RVVSVSCGFNHTLLLTSEYKIFSMGFNQVGQLGIENVVDSAVPLP--------------- 119

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-- 329
                   V++  K     V +I  G   SA +TD G L  +G   +GQ G+G  N +  
Sbjct: 120 --------VDTLQKCN---VIKIKAGNNISAAITDKGDLYIWGTSSFGQLGNGKMNPKSN 168

Query: 330 -------LRPSYASSLMD------IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
                  L P  +    D      IQ   +  G  HT+ +S  G ++ +G NQ+GQLG G
Sbjct: 169 QFIPTTILEPFISEQEKDNPIYQNIQYSNVCFGAQHTIAVSTTGTIFSWGSNQYGQLGLG 228

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
               + VP  +      ++    ++ G  HS++LT +G V  WG N+YGQLG GD+ID N
Sbjct: 229 HCNTKLVPVPVRFNRHSTRIVVDIASGNFHSSLLTLEGDVYLWGSNQYGQLGQGDTIDLN 288

Query: 437 IPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           +P  V   I       +A G  HT+LL +   +
Sbjct: 289 VPKKVKGSIEFKKINRMALGNNHTILLTKDQDV 321



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 73/238 (30%), Positives = 118/238 (49%), Gaps = 26/238 (10%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS----RIKMVPTPHLIPCLEHAASGK 269
           + K+ AG   +  ++D G ++ WG    GQLG G       + +PT  L P +      K
Sbjct: 128 VIKIKAGNNISAAITDKGDLYIWGTSSFGQLGNGKMNPKSNQFIPTTILEPFISEQE--K 185

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
           D P+       N            +  G +H+  V+  G + ++G   YGQ G G  N +
Sbjct: 186 DNPIYQNIQYSN------------VCFGAQHTIAVSTTGTIFSWGSNQYGQLGLGHCNTK 233

Query: 330 LRP---SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
           L P    +      I V+ IA+G +H+  +++EG VY++G NQ+GQLG G     NVPK 
Sbjct: 234 LVPVPVRFNRHSTRIVVD-IASGNFHSSLLTLEGDVYLWGSNQYGQLGQGDTIDLNVPKK 292

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN---IPSLV 441
           ++  I E K+   ++ G  H+ +LT+D  V ++G N++ QLG G    +N    P+L+
Sbjct: 293 VKGSI-EFKKINRMALGNNHTILLTKDQDVYTFGNNEFYQLGHGSMGGKNKIYFPTLI 349



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 92/350 (26%), Positives = 143/350 (40%), Gaps = 76/350 (21%)

Query: 52  WKD-VCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
           WK  V    CGF    L TSE  K+ + G  +  GQ  + +      P P     + +V+
Sbjct: 72  WKRRVVSVSCGFNHTLLLTSEY-KIFSMG-FNQVGQLGIENVVDSAVPLPVDTLQKCNVI 129

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
           K  AG     ++T+ G++Y WG          T  FG  G+ + +    Q  +PT    P
Sbjct: 130 KIKAGNNISAAITDKGDLYIWG----------TSSFGQLGNGKMNPKSNQ-FIPTTILEP 178

Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
                            + +E +NP               +   ++ + V  G +HT+ +
Sbjct: 179 F---------------ISEQEKDNP---------------IYQNIQYSNVCFGAQHTIAV 208

Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           S  G ++ WG    GQLGLG    K+VP P                  VR        + 
Sbjct: 209 STTGTIFSWGSNQYGQLGLGHCNTKLVPVP------------------VR------FNRH 244

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI-QVEQ 345
               V +IA G  HS+++T  G +  +G   YGQ G G T D   P      ++  ++ +
Sbjct: 245 STRIVVDIASGNFHSSLLTLEGDVYLWGSNQYGQLGQGDTIDLNVPKKVKGSIEFKKINR 304

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---VPKLLETPIL 392
           +A G  HT+ ++ +  VY FG N+F QLG G    +N    P L++ P L
Sbjct: 305 MALGNNHTILLTKDQDVYTFGNNEFYQLGHGSMGGKNKIYFPTLIQKPRL 354



 Score = 49.7 bits (117), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 15/127 (11%)

Query: 313 FGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           + WG  G+ G+   N D+  PS  S L+ + ++Q++ G  H+  I V     ++G    G
Sbjct: 5   YSWG-KGKTGNTCHNIDKKYPSPPSVLISLNLDQLSIGPNHSAAI-VNNECLMWG-EVMG 61

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           +  T + +           I+  +R   VSCG  H+ +LT + ++ S G+N+ GQLG+ +
Sbjct: 62  RKHTTLFK-----------IVWKRRVVSVSCGFNHTLLLTSEYKIFSMGFNQVGQLGIEN 110

Query: 432 SIDRNIP 438
            +D  +P
Sbjct: 111 VVDSAVP 117


>gi|221482889|gb|EEE21220.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii GT1]
          Length = 1020

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 14/243 (5%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           +GD      P LV    G  +  VA    HT+   D G  + WG    G+LGL      +
Sbjct: 167 TGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGL--HGLSI 224

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS----YVKEIACGGRHSAVV----T 305
           P+   +     A   +  PL         + +   S    ++ ++ACG  HSA +     
Sbjct: 225 PSSAGLGVFSPATGARPEPLA--SACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQ 282

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
           D  +L T G GL G+ GHG   D+  P+   +L ++ +  IA G  HT C++  G +Y +
Sbjct: 283 DRTSLFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTW 342

Query: 366 GGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           GG  FG+LG G  + ++ +PK +  P L +K    V+ G++HSA +T DG++ +WG  + 
Sbjct: 343 GGAAFGKLGLGSTRGSQLLPKHVSGP-LRNKAVVSVALGSQHSACVTTDGELYTWGQGRR 401

Query: 425 GQL 427
           G L
Sbjct: 402 GNL 404



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 119/292 (40%), Gaps = 65/292 (22%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP LV     +   +V+AGG    +++  G+++ WG   EGQLG G R +    P L+  
Sbjct: 123 SPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDR-RDASVPRLVKA 181

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           L                     GK     VK +AC   H+    D G+   +G  L G+ 
Sbjct: 182 LH--------------------GK----VVKAVACSQEHTVCCLDDGSAYAWGCALNGRL 217

Query: 322 G-HG------------------------STNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G HG                        S      P    SL    +  +A G +H+  +
Sbjct: 218 GLHGLSIPSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFL 277

Query: 357 SV--EGRVYVF--GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
            +  + R  +F  G    G+LG G ++  ++P  +    LE+     ++CGA H+A +T 
Sbjct: 278 GIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTAVHA--LENVNITAIACGAHHTACVTS 335

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RN-----IACGWWHT 458
            G + +WG   +G+LGLG +       L+P H   P RN     +A G  H+
Sbjct: 336 AGTLYTWGGAAFGKLGLGSTRGSQ---LLPKHVSGPLRNKAVVSVALGSQHS 384



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 28/163 (17%)

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
           ++ +   P    +L +I  E+++AG      ++  G +Y++G N  GQLGTG  +  +VP
Sbjct: 117 TSEEMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVP 176

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRNI------ 437
           +L++   L  K  K V+C   H+    +DG   +WG    G+LGL G SI  +       
Sbjct: 177 RLVKA--LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFS 234

Query: 438 PS-------------------LVPIHGFLPRNIACGWWHTLLL 461
           P+                   L  + G+   ++ACG +H+  L
Sbjct: 235 PATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFL 277


>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 553

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 112/266 (42%), Gaps = 39/266 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPC 261
           P  V+L  G  +  VA G RH L L+  G V  WG   EGQLG GS      P    +P 
Sbjct: 78  PVAVSLPAGTAVAAVAVGDRHGLALTSAGTVLAWGRNIEGQLGNGSTTSSSTPVAVSLPT 137

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
              A +                          +A G  HS  +T AG +L +G   +GQ 
Sbjct: 138 GTRAVA--------------------------VAAGADHSLALTSAGTILAWGDNTFGQL 171

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG-RVYVFGGNQFGQLGTGVDQA 380
           G GST D+  P   S      V  IAAG  H + ++  G  +  +G N  GQLG G    
Sbjct: 172 GDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTSTGPTLLTWGKNTRGQLGDGTTTG 231

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
            + P  +  P         V+ G  HS VLT D   L+WG N +GQLG G + D    SL
Sbjct: 232 RDTPVAVTLP--PGVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLGNGTTTD----SL 285

Query: 441 VPIHGFLPRN-----IACGWWHTLLL 461
           VPI   LP       IA G  H+  L
Sbjct: 286 VPIAVALPTGTEATAIAAGRLHSAAL 311



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 161/388 (41%), Gaps = 56/388 (14%)

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVSVTEAGEVY 126
           S  ++ WG  +D GQ  L +G   ++ EP    LP   +V   A G  H +++T AG V 
Sbjct: 53  SDTILAWGE-NDGGQ--LGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTSAGTVL 109

Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
            WG           R+    G     ST   S+ P   + P+  RA         + +  
Sbjct: 110 AWG-----------RNI--EGQLGNGST-TSSSTPVAVSLPTGTRAVAVAAGADHSLALT 155

Query: 187 EESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMG-QVWG 235
                 A GD  F            +P  V+L  G  +  +AAG  H L+L+  G  +  
Sbjct: 156 SAGTILAWGDNTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTSTGPTLLT 215

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG    GQLG G+                  +G+D P+ V           G + V  +A
Sbjct: 216 WGKNTRGQLGDGT-----------------TTGRDTPVAVTL-------PPGVT-VTSVA 250

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
            G  HS V+T     L +G   +GQ G+G+T D L P   +     +   IAAG  H+  
Sbjct: 251 GGRDHSLVLTSDDTALAWGGNSFGQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAA 310

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++ EG  + +G N  GQLG G     + P  +  P  +++   +    + H+  +T  G 
Sbjct: 311 LTSEGAAFAWGHNGRGQLGNGSTTDSSEPVAVSLPA-DTRLTAIAGRDSDHNVTITSAGA 369

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            L+WG N  G+LG G + DR+ P  V +
Sbjct: 370 ALAWGANANGELGDGSTTDRSTPVAVSL 397



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 135/355 (38%), Gaps = 46/355 (12%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
           LA + +G ++ WG  + EGQ    S     TP    LPT    V  AAG  H +++T AG
Sbjct: 100 LALTSAGTVLAWGR-NIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAG 158

Query: 124 EVYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALP--TEQAPPSDKRAGEEVVKR 179
            +  WG             FG  G  S    ST    +LP  T  A  +  R    V+  
Sbjct: 159 TILAWG----------DNTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTS 208

Query: 180 RKTSS---AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
              +     +        G      +P  VTL PGV +T VA G  H+L+L+       W
Sbjct: 209 TGPTLLTWGKNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSLVLTSDDTALAW 268

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           G    GQLG G+      T  L+P      +G +                       IA 
Sbjct: 269 GGNSFGQLGNGTT-----TDSLVPIAVALPTGTE--------------------ATAIAA 303

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA-GLWHTVC 355
           G  HSA +T  GA   +G    GQ G+GST D   P   S   D ++  IA     H V 
Sbjct: 304 GRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSEPVAVSLPADTRLTAIAGRDSDHNVT 363

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           I+  G    +G N  G+LG G     + P  +  P     R   ++ G   S  L
Sbjct: 364 ITSAGAALAWGANANGELGDGSTTDRSTPVAVSLP--AGTRVAAIAAGDDQSMAL 416



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 81/165 (49%), Gaps = 5/165 (3%)

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
           +AVV+D   +L +G    GQ G+G+  D   P   S      V  +A G  H + ++  G
Sbjct: 49  TAVVSDT--ILAWGENDGGQLGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTSAG 106

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            V  +G N  GQLG G   + + P  +  P     RA  V+ GA HS  LT  G +L+WG
Sbjct: 107 TVLAWGRNIEGQLGNGSTTSSSTPVAVSLP--TGTRAVAVAAGADHSLALTSAGTILAWG 164

Query: 421 WNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAET 464
            N +GQLG G + DR+ P  V +  G     IA G  H L+L  T
Sbjct: 165 DNTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTST 209


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 177/428 (41%), Gaps = 85/428 (19%)

Query: 33   PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
            P  +P  S     +CG +    +   G   A      G+L   G++DD     + S   G
Sbjct: 4006 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4064

Query: 93   ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
                 F +     +V +     H +++TE+GEV++WG            D+G  G    D
Sbjct: 4065 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4106

Query: 153  STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
               +   +   Q        GEEVV+                                  
Sbjct: 4107 RQRRPRQIEALQ--------GEEVVQ---------------------------------- 4124

Query: 213  KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
                ++ G +H+ +++  G+++ +G G  G+LGLG+       P  +  LE    G+ R 
Sbjct: 4125 ----MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK-KLPERVTALEGYQIGQAR- 4178

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL-TFGWGLYGQCGHGSTNDQLR 331
                           +S +  +ACG  H+  V+  G+++  FG G YG+ G G++  +  
Sbjct: 4179 --------------NKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4224

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P     L  I ++++A G   +V ++ +G+VY FG ++   L  G  +  N P+  + P+
Sbjct: 4225 PQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHNRPQ--QVPV 4282

Query: 392  LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRN 450
            L     + V+ GA H+  LT  G + +WG N  GQLGLG +     P+LV +  G   R 
Sbjct: 4283 LAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ 4342

Query: 451  IACGWWHT 458
            I+ G  H+
Sbjct: 4343 ISAGRCHS 4350



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 36/243 (14%)

Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
           I+S+  +V+ WG     QL  G++ K++  P L P    A +                  
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKIL-QPKLAPSFSDAQT------------------ 407

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-----LRPSYASSLMD 340
                   I  G   + V++  G++   G G YG+ G G +N+Q     L      S+  
Sbjct: 408 --------IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           +   + + G  HT+  + EG V+ +G   +G+LG G    +  PKL++ P L+ K    V
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCV 516

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           S G RHSA +TEDG++ +WG   +G+LG GDS  RNIP+LV     +   ++CG  HT+ 
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIA 575

Query: 461 LAE 463
           L++
Sbjct: 576 LSK 578



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 43/240 (17%)

Query: 233  VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
            V+ WG G  GQL    R  MVP                            +     S  +
Sbjct: 3985 VYLWGAGRHGQLAEAGRNVMVP----------------------------AAAPSFSQAQ 4016

Query: 293  EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL-- 350
            ++ CG   + V+   G +L  G G YG+ G G+++D    +  S+L    V Q+      
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4076

Query: 351  -WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
              H++ ++  G V+ +G   +G+LG G    +  P+ +E   L+ +    +SCG +HSAV
Sbjct: 4077 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFKHSAV 4134

Query: 410  LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGF---LPRN------IACGWWHTL 459
            +T DG++ ++G   YG+LGLG++ ++ +P  V  + G+     RN      +ACG  HTL
Sbjct: 4135 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTL 4194



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 31/261 (11%)

Query: 216  KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            +V  G   T ++   G V   G G  G+LG G+   +    H++  +  A  G      V
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL----HVLTVIS-ALQG-----FV 4066

Query: 276  RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                V S G  G            HS  +T++G + ++G G YG+ GHG+++ Q RP   
Sbjct: 4067 VTQLVTSCGSDG------------HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI 4114

Query: 336  SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK---LLETPIL 392
             +L   +V Q++ G  H+  ++ +G+++ FG   +G+LG G    + +P+    LE   +
Sbjct: 4115 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4174

Query: 393  ESKRAK----VVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GF 446
               R K     V+CG  H+  ++ DG ++ ++G   YG+LGLG+S  ++ P  V +  G 
Sbjct: 4175 GQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGI 4234

Query: 447  LPRNIACGWWHTLLLAETTQI 467
              + +ACG   ++ L +  Q+
Sbjct: 4235 GIKKVACGTQFSVALTKDGQV 4255



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +  V+AG RH+  +++ G+++ WG G  G+LG G                  ++ ++
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD-----------------SNSRN 552

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
            P LV+            S V E++CG  H+ A+  D   + +FG G  G+ GHG TN  
Sbjct: 553 IPTLVKD----------ISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLE 388
            +P    +L  + + ++ AG   ++ ++  G+VY +G      LG G  +A  + PKL+E
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE 660

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
              L + R   +S G  H   L+ D +V +WG N  GQ G G+S
Sbjct: 661 E--LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 141/361 (39%), Gaps = 88/361 (24%)

Query: 58   GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGW 113
            G  G ++A +ESG++ +WG  D     Y   G      +  P   EA     VV+ + G+
Sbjct: 4075 GSDGHSMALTESGEVFSWGDGD-----YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGF 4129

Query: 114  AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
             H   VT  G+++T+G            D+G  G                    S+K+  
Sbjct: 4130 KHSAVVTSDGKLFTFG----------NGDYGRLG----------------LGNTSNKKLP 4163

Query: 174  EEV--VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-DM 230
            E V  ++  +   AR +S                        I  VA G  HTL +S D 
Sbjct: 4164 ERVTALEGYQIGQARNKS-----------------------IICSVACGLNHTLAVSADG 4200

Query: 231  GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
              VW +G G  G+LGLG+                 ++ K  P       V+     G   
Sbjct: 4201 SMVWAFGDGDYGKLGLGN-----------------STAKSSP-----QKVDVLCGIG--- 4235

Query: 291  VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +K++ACG + S  +T  G + TFG         G   +  RP     L  + +E +A G 
Sbjct: 4236 IKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGA 4295

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
             HT+ ++  G +Y +G N  GQLG G       P L+   +L+ K  + +S G  HSA  
Sbjct: 4296 EHTLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVT--VLQGKNVRQISAGRCHSAAW 4353

Query: 411  T 411
            T
Sbjct: 4354 T 4354



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 140/371 (37%), Gaps = 99/371 (26%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
           G  G  LA +  G++ +WG  D     Y   G    + + +P     P +  VV   +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
           + H  +VTE GE+YTWG            DFG  G    DS  +   +PT     S+   
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--- 562

Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
                                                    + +V+ G  HT+ LS  G+
Sbjct: 563 -----------------------------------------VGEVSCGSSHTIALSKDGR 581

Query: 233 -VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
            VW +G G  G+LG G   + V  P +I  L              QG           ++
Sbjct: 582 TVWSFGGGDNGKLGHGDTNR-VYKPKVIEAL--------------QG----------MFI 616

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           +++  G + S  +T  G +  +G G    CG  S    LRP     L   ++  I+ G  
Sbjct: 617 RKVCAGSQSSLSLTSTGQVYAWGCGACLGCG-SSEATALRPKLIEELAATRIVDISIGDS 675

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS---A 408
           H + +S +  VY +G N  GQ G G +    + K  +   L+    + VS G  HS    
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSGLDGIAIQQVSAGTSHSLAWT 734

Query: 409 VLTEDGQVLSW 419
            L  D QV++W
Sbjct: 735 ALPRDRQVVAW 745



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 362  VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
            VY++G  + GQL    +   NV      P     +A+ V CG   + V+  +G VL+ G 
Sbjct: 3985 VYLWGAGRHGQLA---EAGRNVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGE 4039

Query: 422  NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI--ACGW-WHTLLLAETTQI 467
              YG+LG G+S D ++ +++  + GF+   +  +CG   H++ L E+ ++
Sbjct: 4040 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4089


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 117/254 (46%), Gaps = 26/254 (10%)

Query: 178 KRRKTSSAREESENPASGDE----FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
           K +    AR++ ++   G E    +FT  P  V      KI +++ G  HTL LSD G +
Sbjct: 143 KSKAEGGARQQGDDAGDGQEDGPSWFTPKPARVRFRDKCKIARISCGADHTLALSDGGAL 202

Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
           + WG G  G LG G       +P  +       SGK +  L         G+ G   V  
Sbjct: 203 YAWGVGSYGNLGQGDTSDAY-SPVRVLLGSEKGSGKKKENL-------GIGRRGTDPVVV 254

Query: 294 IAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
             C  G +HS   T  G L T+G G  G+ G G     L P+    ++D  V  ++AG  
Sbjct: 255 TCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDS 314

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLE----TPILESKRAKVVSCGARH 406
           H+ CI  +G +Y +G   FG+LG G DQ E  VP+ +E     P+L+      V+CG  H
Sbjct: 315 HSACIDRQGVLYTWGSGGFGRLGHG-DQGEIPVPRKVEGFGGVPVLQ------VACGTFH 367

Query: 407 SAVLTEDGQVLSWG 420
           +  LT  G V +WG
Sbjct: 368 TLALTHKGTVFAWG 381



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 150/421 (35%), Gaps = 134/421 (31%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
           C  G   ++A +  G L TWG   + G+  L   +   +P       +  VV  +AG +H
Sbjct: 257 CAAGAKHSMACTSDGTLWTWGHGGN-GRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSH 315

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
              +   G +YTWG                +G F +   G Q  +P              
Sbjct: 316 SACIDRQGVLYTWG----------------SGGFGRLGHGDQGEIPV------------- 346

Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
                                      P  V    GV + +VA G  HTL L+  G V+ 
Sbjct: 347 ---------------------------PRKVEGFGGVPVLQVACGTFHTLALTHKGTVFA 379

Query: 236 WGYG--GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
           WG G       G      MV  P  +  +E A                         V  
Sbjct: 380 WGAGLALGLGEGEDGGGGMVTVPKHLSDIEVA-------------------------VLN 414

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL------MDIQ----- 342
           +A G  HSA VT  G LL +G G   + GHG   +Q  P Y + L       D+Q     
Sbjct: 415 VAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGV 474

Query: 343 ----------------------------VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
                                       ++ +  G  HTV ++  G V+V+G N  GQLG
Sbjct: 475 SRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLG 534

Query: 375 TG--VDQAENVPKLLE---TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G  V++ +  P  L+   TPI      + ++CG++H   + + G V +WG N  GQLGL
Sbjct: 535 LGEQVEEDQYEPVKLDCFSTPI------RRIACGSKHCLAVAQYGDVFAWGANDDGQLGL 588

Query: 430 G 430
           G
Sbjct: 589 G 589



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 161/391 (41%), Gaps = 90/391 (23%)

Query: 59  GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAAGWAH 115
           GCG    +A + +G +  WGS +DEGQ  L      +  EP  L   ++ + + A G  H
Sbjct: 507 GCGENHTVALTGTGAVWVWGS-NDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIACGSKH 565

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
           C++V + G+V+ WG            D G  G      + + +A+               
Sbjct: 566 CLAVAQYGDVFAWG----------ANDDGQLGLGVLRPSFEPAAV--------------- 600

Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
                   +A  ++ +   GD++   S C +T N G +   +A         ++ G +W 
Sbjct: 601 --------TALRQAIDVFCGDDY---SAC-ITSNGGAQTVSLALESG-----TEFGDLWT 643

Query: 236 WGYGGEGQLGLGSRIKM--VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
           WG    G+LGLG  +    + TP  +P                              V  
Sbjct: 644 WGAAESGKLGLGEDVASGSILTPQKVPF----------------------------SVPV 675

Query: 294 IAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
            AC  G  H+  +T  G    +G G YG+ G G+T +   P+       +++  +AAG  
Sbjct: 676 CACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGAS 735

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL---LETPILESKRAKVVSCGARHSA 408
           H++ +S++G ++++G  +     T      N P++   LE+P    K  K ++    HS 
Sbjct: 736 HSLALSMDGDLWIWGKKE----DTCSTTNYNSPRIFMQLESPSGVPK-VKSIAAAEHHSL 790

Query: 409 VLTEDGQVLSWGWNKYGQLGLG----DSIDR 435
            +TE G+V +WG NK  Q G G    + +DR
Sbjct: 791 AVTETGEVFAWGDNKLYQTGCGKRQAERLDR 821



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 169/441 (38%), Gaps = 109/441 (24%)

Query: 94  TPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-Q 150
           TP+P       +  + + + G  H +++++ G +Y WG              GS G+  Q
Sbjct: 169 TPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWG-------------VGSYGNLGQ 215

Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
            D++   S  P      S+K +G    K+++         +P                  
Sbjct: 216 GDTSDAYS--PVRVLLGSEKGSG----KKKENLGIGRRGTDP------------------ 251

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----A 265
            V +T  AAG +H++  +  G +W WG+GG G+LGLG     +    +   L+      +
Sbjct: 252 -VVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVS 310

Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSY----------------------VKEIACGGRHSAV 303
           A       + RQG + + G  G                         V ++ACG  H+  
Sbjct: 311 AGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLA 370

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE--QIAAGLWHTVCISVEGR 361
           +T  G +  +G GL    G G        +    L DI+V    +AAG +H+  ++V G 
Sbjct: 371 LTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGD 430

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKL------------LETPILESKRAKVVS-------- 401
           + V+G     +LG G  Q +  PK             L++ +  S+  +  S        
Sbjct: 431 LLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGES 490

Query: 402 -----------------CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
                            CG  H+  LT  G V  WG N  GQLGLG+ ++ +    V + 
Sbjct: 491 AGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLD 550

Query: 445 GFLP--RNIACGWWHTLLLAE 463
            F    R IACG  H L +A+
Sbjct: 551 CFSTPIRRIACGSKHCLAVAQ 571



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 126/326 (38%), Gaps = 80/326 (24%)

Query: 214 ITKVAAGGRHTLILS---DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP------CLEH 264
           + +VA G  HTL++    D  Q+  WG      LGLG   +    P L+P        E 
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEV 107

Query: 265 AASGKDRPLLVRQ-----GSVNSSGKAGRSY----------------------------- 290
           +    +  +LV++     G V + G   R                               
Sbjct: 108 SCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPSW 167

Query: 291 ---------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                          +  I+CG  H+  ++D GAL  +G G YG  G G T+D   P   
Sbjct: 168 FTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVRV 227

Query: 336 -------------------SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
                                   + V   AAG  H++  + +G ++ +G    G+LG G
Sbjct: 228 LLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLG 287

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            ++    P +++  IL+ +    VS G  HSA +   G + +WG   +G+LG GD  +  
Sbjct: 288 HNRGSLSPAVVDY-ILD-RDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP 345

Query: 437 IPSLVPIHGFLP-RNIACGWWHTLLL 461
           +P  V   G +P   +ACG +HTL L
Sbjct: 346 VPRKVEGFGGVPVLQVACGTFHTLAL 371



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 156/424 (36%), Gaps = 66/424 (15%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWAHCV 117
           G    LA +  G +  WG+    G      G  G    P  L   E +V+  AAG  H  
Sbjct: 364 GTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSA 423

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
           +VT  G++  WG                 G   +   G Q   P  +   +D R    V 
Sbjct: 424 AVTVGGDLLVWG----------------VGGSSRLGHGDQQNQPFPKYV-ADLRNRMYVA 466

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
             +          + +  D     +           +  +  G  HT+ L+  G VW WG
Sbjct: 467 DLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWG 526

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
              EGQLGLG +++                 +D+   V+    ++        ++ IACG
Sbjct: 527 SNDEGQLGLGEQVE-----------------EDQYEPVKLDCFSTP-------IRRIACG 562

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
            +H   V   G +  +G    GQ G G       P+  ++L   Q   +  G  ++ CI+
Sbjct: 563 SKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALR--QAIDVFCGDDYSACIT 620

Query: 358 VE----------------GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
                             G ++ +G  + G+LG G D A      + TP        V +
Sbjct: 621 SNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGS---ILTPQKVPFSVPVCA 677

Query: 402 C--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHT 458
           C  G  H+  +T  G+  +WG   YG+LG+G + +   P+      G   R++A G  H+
Sbjct: 678 CSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHS 737

Query: 459 LLLA 462
           L L+
Sbjct: 738 LALS 741


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 136/285 (47%), Gaps = 40/285 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-------PCLEH 264
           VK+T  A G  HTL+ +  G ++  G   EGQLGLG       + HL+       P    
Sbjct: 90  VKLT--ACGRTHTLVFTSRGNLYACGGNNEGQLGLGD-CNDRTSFHLVEFFNKQGPIKML 146

Query: 265 AASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IACGGRHSAVV 304
           AA       L + G +     NS G+ G                     ++CG  HSA V
Sbjct: 147 AAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFV 206

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI--QVEQIAAGLWHTVCISVEGRV 362
           T  GAL TFG    G+ G  ST           + DI  +V Q+A G  HTV ++ E  V
Sbjct: 207 TVDGALYTFGEKDSGKLGL-STEKLANHKVPQQVTDIPDRVVQVACGGGHTVALT-ENEV 264

Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           Y FG  QFGQLG G    E+ +P+++E       R K  +CG  H+A++T++G + ++G 
Sbjct: 265 YSFGLGQFGQLGHGTFIFESRLPRVVEH--FRKGRVKHAACGENHTALITDNGLLYTFGD 322

Query: 422 NKYGQLGLGDS--IDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            ++G+LGLG+    ++  P+L P    +   ++ CG  H L+LA+
Sbjct: 323 GRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 117/254 (46%), Gaps = 38/254 (14%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           +++ G  HT ++++ G+++ +G    GQLGLG++  +                 ++P  V
Sbjct: 40  RISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTV-----------------NKPTCV 82

Query: 276 RQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
                    KA RS  VK  ACG  H+ V T  G L   G    GQ G G  ND  R S+
Sbjct: 83  ---------KALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCND--RTSF 131

Query: 335 A-SSLMDIQ--VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
                 + Q  ++ +AAG   +  ++ +GR+Y+ G N  GQ+G G +     P+ +    
Sbjct: 132 HLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV-- 189

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS--IDRNIPSLVPIHGFLPR 449
              KR   VSCG  HSA +T DG + ++G    G+LGL      +  +P  V        
Sbjct: 190 --GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVV 247

Query: 450 NIACGWWHTLLLAE 463
            +ACG  HT+ L E
Sbjct: 248 QVACGGGHTVALTE 261



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 12/138 (8%)

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           + ++GA+ TFG   +             PS      D+ + +I+ G  HT  ++  G+++
Sbjct: 9   IPESGAVFTFGKSKFADNA---------PSKFWLKNDVPL-RISCGDEHTALVTENGKLF 58

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
           +FG N +GQLG G     N P  ++   L S+R K+ +CG  H+ V T  G + + G N 
Sbjct: 59  MFGSNNWGQLGLGTKTTVNKPTCVKA--LRSERVKLTACGRTHTLVFTSRGNLYACGGNN 116

Query: 424 YGQLGLGDSIDRNIPSLV 441
            GQLGLGD  DR    LV
Sbjct: 117 EGQLGLGDCNDRTSFHLV 134


>gi|237840751|ref|XP_002369673.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211967337|gb|EEB02533.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221503319|gb|EEE29017.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii VEG]
          Length = 1015

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 14/243 (5%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           +GD      P LV    G  +  VA    HT+   D G  + WG    G+LGL      +
Sbjct: 167 TGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGL--HGLSI 224

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS----YVKEIACGGRHSAVV----T 305
           P+   +     A   +  PL         + +   S    ++ ++ACG  HSA +     
Sbjct: 225 PSSAGLGVFSPATGARPEPLA--SACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQ 282

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
           D  +L T G GL G+ GHG   D+  P+   +L ++ +  IA G  HT C++  G +Y +
Sbjct: 283 DRTSLFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTW 342

Query: 366 GGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           GG  FG+LG G  + ++ +PK +  P L +K    V+ G++HSA +T DG++ +WG  + 
Sbjct: 343 GGAAFGKLGLGSTRGSQLLPKHVSGP-LRNKAVVSVALGSQHSACVTTDGELYTWGQGRR 401

Query: 425 GQL 427
           G L
Sbjct: 402 GNL 404



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 119/292 (40%), Gaps = 65/292 (22%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP LV     +   +V+AGG    +++  G+++ WG   EGQLG G R +    P L+  
Sbjct: 123 SPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDR-RDASVPRLVKA 181

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           L                     GK     VK +AC   H+    D G+   +G  L G+ 
Sbjct: 182 LH--------------------GK----VVKAVACSQEHTVCCLDDGSAYAWGCALNGRL 217

Query: 322 G-HG------------------------STNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G HG                        S      P    SL    +  +A G +H+  +
Sbjct: 218 GLHGLSIPSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFL 277

Query: 357 SV--EGRVYVF--GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
            +  + R  +F  G    G+LG G ++  ++P  +    LE+     ++CGA H+A +T 
Sbjct: 278 GIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTAVHA--LENVNITAIACGAHHTACVTS 335

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RN-----IACGWWHT 458
            G + +WG   +G+LGLG +       L+P H   P RN     +A G  H+
Sbjct: 336 AGTLYTWGGAAFGKLGLGSTRGSQ---LLPKHVSGPLRNKAVVSVALGSQHS 384



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 28/163 (17%)

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
           ++ +   P    +L +I  E+++AG      ++  G +Y++G N  GQLGTG  +  +VP
Sbjct: 117 TSEEMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVP 176

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRNI------ 437
           +L++   L  K  K V+C   H+    +DG   +WG    G+LGL G SI  +       
Sbjct: 177 RLVKA--LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFS 234

Query: 438 PS-------------------LVPIHGFLPRNIACGWWHTLLL 461
           P+                   L  + G+   ++ACG +H+  L
Sbjct: 235 PATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFL 277


>gi|357164242|ref|XP_003579993.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Brachypodium distachyon]
          Length = 548

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 135/282 (47%), Gaps = 34/282 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG---YGGEGQLGLGSRIK 251
           GD      PCL++   G++IT+ A G R T+++SD G V+ +G   +G   Q G GS   
Sbjct: 184 GDRENKFKPCLISSLQGIRITQAAVGLRRTMLVSDTGSVYTFGLDTFGWLDQYG-GSNGN 242

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
            V +P L+  L        + + V Q S+                GG  SAV++  G + 
Sbjct: 243 CVNSPKLLESL--------KGVFVVQASI----------------GGYFSAVLSREGRVY 278

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCISVE---GRVYVFGG 367
           TF WG   + GH S    + P   S  L D+ V QIAAG  + + +S       VY  G 
Sbjct: 279 TFSWGRAERLGHSSELSDVEPRLLSGPLDDVLVAQIAAGNCYLLLLSYHPTGMSVYSLGC 338

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
              G+LG G    E VPKL+      + R   +S GA H+AV+  DG+V +WGWN  G L
Sbjct: 339 GLGGKLGHGNKDFEGVPKLIGHFQAFNIRPMSISAGAWHAAVMCRDGRVFTWGWNSSGCL 398

Query: 428 GLGDSID-RNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           G GDS D   +P  V  ++     +++ G W T ++A+   +
Sbjct: 399 GHGDSEDCVTLPRAVEGLNNVKAVHVSAGEWCTFVVADNGDV 440



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 7/183 (3%)

Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
           K  R    ++  G  HS VVT  G + +FG    GQ G G   ++ +P   SSL  I++ 
Sbjct: 145 KNYRREKSQVIAGPGHSIVVTAKGDVYSFGVNCSGQLGLGDRENKFKPCLISSLQGIRIT 204

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFG---QLGTGVDQAENVPKLLETPILESKRAKVVS 401
           Q A GL  T+ +S  G VY FG + FG   Q G       N PKLLE+  L+       S
Sbjct: 205 QAAVGLRRTMLVSDTGSVYTFGLDTFGWLDQYGGSNGNCVNSPKLLES--LKGVFVVQAS 262

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTL 459
            G   SAVL+ +G+V ++ W +  +LG    +    P L+  P+   L   IA G  + L
Sbjct: 263 IGGYFSAVLSREGRVYTFSWGRAERLGHSSELSDVEPRLLSGPLDDVLVAQIAAGNCYLL 322

Query: 460 LLA 462
           LL+
Sbjct: 323 LLS 325



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 107/277 (38%), Gaps = 50/277 (18%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP- 260
           SP L+    GV + + + GG  + +LS  G+V+ + +G   +LG  S +  V  P L+  
Sbjct: 246 SPKLLESLKGVFVVQASIGGYFSAVLSREGRVYTFSWGRAERLGHSSELSDV-EPRLLSG 304

Query: 261 -----CLEHAASGKDRPLLVRQGSVNSS----------------------------GKAG 287
                 +   A+G    LL+       S                             +A 
Sbjct: 305 PLDDVLVAQIAAGNCYLLLLSYHPTGMSVYSLGCGLGGKLGHGNKDFEGVPKLIGHFQAF 364

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQI 346
                 I+ G  H+AV+   G + T+GW   G  GHG + D +  P     L +++   +
Sbjct: 365 NIRPMSISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDCVTLPRAVEGLNNVKAVHV 424

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI-----LESKRAKVVS 401
           +AG W T  ++  G VY FG      LG   + AEN   L   P      L  +  ++  
Sbjct: 425 SAGEWCTFVVADNGDVYSFGFRGSHNLGFQDNDAENEDVLPPKPATLLADLNERFVQISP 484

Query: 402 CGA---------RHSAVLTEDGQVLSWGWNKYGQLGL 429
             A          H+  L E G V ++G    GQLG+
Sbjct: 485 TSAYNWNNAEQPHHTVALAESGIVYAFGGGSMGQLGV 521



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 77/197 (39%), Gaps = 41/197 (20%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           ++   ++AG  H  ++   G+V+ WG+   G LG G     V  P  +  L +  +    
Sbjct: 366 IRPMSISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDCVTLPRAVEGLNNVKA---- 421

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW----GLYGQCGHGSTN 327
                                 ++ G   + VV D G + +FG+     L  Q       
Sbjct: 422 --------------------VHVSAGEWCTFVVADNGDVYSFGFRGSHNLGFQDNDAENE 461

Query: 328 DQLRPSYASSLMD-----IQVEQIAAGLW-------HTVCISVEGRVYVFGGNQFGQLGT 375
           D L P  A+ L D     +Q+   +A  W       HTV ++  G VY FGG   GQLG 
Sbjct: 462 DVLPPKPATLLADLNERFVQISPTSAYNWNNAEQPHHTVALAESGIVYAFGGGSMGQLGV 521

Query: 376 G-VDQAENVPKLLETPI 391
             V+  E +P  ++  I
Sbjct: 522 KLVEGKEAMPTPVQVAI 538


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 136/285 (47%), Gaps = 40/285 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-------PCLEH 264
           VK+T  A G  HTL+ +  G ++  G   EGQLGLG       + HL+       P    
Sbjct: 90  VKLT--ACGRTHTLVFTSRGNLYACGGNNEGQLGLGD-CNDRTSFHLVEFFNKQGPIKML 146

Query: 265 AASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IACGGRHSAVV 304
           AA       L + G +     NS G+ G                     ++CG  HSA V
Sbjct: 147 AAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFV 206

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI--QVEQIAAGLWHTVCISVEGRV 362
           T  GAL TFG    G+ G  ST           + DI  +V Q+A G  HTV ++ E  V
Sbjct: 207 TVDGALYTFGEKDSGKLGL-STEKLANHKVPQQVTDIPDRVVQVACGGGHTVALT-ENEV 264

Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           Y FG  QFGQLG G    E+ +P+++E       R K  +CG  H+A++T++G + ++G 
Sbjct: 265 YSFGLGQFGQLGHGTFIFESRLPRVVEH--FRKGRVKHAACGENHTALITDNGLLYTFGD 322

Query: 422 NKYGQLGLGDS--IDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            ++G+LGLG+    ++  P+L P    +   ++ CG  H L+LA+
Sbjct: 323 GRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 12/173 (6%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           I+CG  H+A+VT+ G L  FG   +GQ G G+     +P+   +L   +V+  A G  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET-----PILESKRAKVVSCGARHSA 408
           +  +  G +Y  GGN  GQLG G         L+E      PI      K+++ G+  SA
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPI------KMLAAGSNTSA 154

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
            LT+DG++  WG N  GQ+GLG   +   P  V + G     ++CG++H+  +
Sbjct: 155 ALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV-GKRVFWVSCGYYHSAFV 206



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 116/253 (45%), Gaps = 36/253 (14%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           +++ G  HT ++++ G+++ +G    GQLGLG++   V  P  +  L             
Sbjct: 40  RISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKT-TVNKPTCVKAL------------- 85

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                    K+ R  VK  ACG  H+ V T  G L   G    GQ G G  ND  R S+ 
Sbjct: 86  ---------KSER--VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCND--RTSFH 132

Query: 336 -SSLMDIQ--VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                + Q  ++ +AAG   +  ++ +GR+Y++G N  GQ+G G +     P+ +     
Sbjct: 133 LVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV--- 189

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS--IDRNIPSLVPIHGFLPRN 450
             KR   VSCG  HSA +T DG + ++G    G+LGL      +  +P  V         
Sbjct: 190 -GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ 248

Query: 451 IACGWWHTLLLAE 463
           +ACG  HT+ L E
Sbjct: 249 VACGGGHTVALTE 261



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 12/138 (8%)

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           + ++GA+ TFG   +             PS      D+ + +I+ G  HT  ++  G+++
Sbjct: 9   IPESGAVFTFGKSKFADNA---------PSKFWLKNDVPL-RISCGDEHTALVTENGKLF 58

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
           +FG N +GQLG G     N P  ++   L+S+R K+ +CG  H+ V T  G + + G N 
Sbjct: 59  MFGSNNWGQLGLGTKTTVNKPTCVKA--LKSERVKLTACGRTHTLVFTSRGNLYACGGNN 116

Query: 424 YGQLGLGDSIDRNIPSLV 441
            GQLGLGD  DR    LV
Sbjct: 117 EGQLGLGDCNDRTSFHLV 134


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 2743 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 2785

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 2786 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 2837

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 2838 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 2897

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 2898 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 2955

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 2956 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3015

Query: 457  HTL 459
            H++
Sbjct: 3016 HSV 3018



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 3723 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3782

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 3783 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3842

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 3843 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3902

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 3903 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 3960

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 3961 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4010



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 3738 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 3797

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 3798 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 3841

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 3842 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 3884

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 3885 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 3936

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 3937 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 3994

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 3995 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4029



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2694 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 2751

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 2752 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 2801

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 2802 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 2861

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 2862 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 2902

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 2903 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 2956

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 2957 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3014

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 3015 SHSVAWT 3021



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 3699

Query: 284  GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
            GK   +                            ++K++A   GG+H   ++  G + ++
Sbjct: 3700 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3759

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 3760 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3819

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 3820 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3877

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 3878 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3911



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2635 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2685

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2686 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 2725

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 2726 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 2785

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 2786 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 2843

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 2844 LLGHRVIQVACGSRDAQTLALTDE 2867



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 115/297 (38%), Gaps = 91/297 (30%)

Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
           TL+P LV       I K+AA   G H L L+  G+V+ WG G  G+LG G  + +   P 
Sbjct: 436 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 494

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           +I                       SGK    +V  IACG  +SA +T  G L T+G G 
Sbjct: 495 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 534

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG-------------------LWHTV--CI 356
           YG+ GHGS+ D+  P   + L  ++V  +A G                   LW +V   +
Sbjct: 535 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENETTRLSVLWRSVLGIL 594

Query: 357 SVEGRVYVFGGNQFG-----------------QLGTGVDQAENV------------PKLL 387
            V G V  F  NQ G                 +   GV   + +            P  +
Sbjct: 595 CVSGVVESFRYNQLGVGCRCRQRGWEPPQEDLKFFYGVLTRDVMLREGQIVFEAGRPGCV 654

Query: 388 ETPILESKRA----------------KV--VSCGARHSAVLTEDGQVLSWGWNKYGQ 426
            TP+   K+A                KV  V+ G+ H   LTED +V SWG N   Q
Sbjct: 655 PTPVSSQKQALGYIVCGGCSSLGPGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 711



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 31/192 (16%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V +IAC  +   +++  G + T  +           +D L P     L    + +IAA  
Sbjct: 408 VTQIACAEKRFLILSRNGRVYTQAYN----------SDTLAPQLVQGLASRNIVKIAAHS 457

Query: 351 --WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES--------KRAKVV 400
              H + ++  G VY +G    G+LG G    + VP  LE P + S        K    +
Sbjct: 458 DGHHYLALAATGEVYSWGCGDGGRLGHG----DTVP--LEEPKVISAFSGKQAGKHVVHI 511

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           +CG+ +SA +T +G++ +WG   YG+LG G S D  IP LV  + G    ++ACG     
Sbjct: 512 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 571

Query: 460 LLA----ETTQI 467
            LA    ETT++
Sbjct: 572 TLAVTENETTRL 583



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 3901 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3959

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 3960 CTEDGEVYTWG 3970



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 3748 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3799

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 3800 ACVTAAGDLYTWG 3812


>gi|356511051|ref|XP_003524245.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 534

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 32/261 (12%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           G++I +  A    T+++SD GQV+ +G  Y  E ++G     KMV TP L+  L++    
Sbjct: 196 GIRIIQATAATGRTMLISDSGQVYAFGKQYFCENEIG-NEGSKMVTTPQLVESLKNI--- 251

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                +V + A G   +AV++  G + TF WG  G+  H +  +
Sbjct: 252 ---------------------FVVQAAIGNYFTAVLSREGRVYTFSWGSDGKLCHQTDPN 290

Query: 329 QLRPS-YASSLMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGTGVDQAENVP 384
            + P     +L  I V QIAAG  + +C++ +     VY  G    G+LG G +  E  P
Sbjct: 291 DVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGMGGKLGHGTETDEKYP 350

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PI 443
           +L+E   L + +  V++ G+ H+AV+ +DG+V +WGW ++G LG G+     +P +V  +
Sbjct: 351 RLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTWGWGRHGCLGHGNEECALVPKVVEEL 410

Query: 444 HGFLPRNIACGWWHTLLLAET 464
                 ++A G + T +++++
Sbjct: 411 KNVKAVHVAAGDYTTFVVSDS 431



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 26/243 (10%)

Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
           E+E    G +  T +P LV     + + + A G   T +LS  G+V+ + +G +G+L   
Sbjct: 228 ENEIGNEGSKMVT-TPQLVESLKNIFVVQAAIGNYFTAVLSREGRVYTFSWGSDGKLCHQ 286

Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
           +    V    L+  LEH       P++           AG  Y+  +AC     +V    
Sbjct: 287 TDPNDVEPRPLLGALEHI------PVV--------QIAAGFCYLLCLACQPSGMSV---- 328

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYAS--SLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
               + G G+ G+ GHG+  D+  P       L+++Q   IAAG WH   +  +GRV  +
Sbjct: 329 ---YSVGCGMGGKLGHGTETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTW 385

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G  + G LG G ++   VPK++E   L++ +A  V+ G   + V+++ G   S+G+ + G
Sbjct: 386 GWGRHGCLGHGNEECALVPKVVEE--LKNVKAVHVAAGDYTTFVVSDSGDAYSFGYGESG 443

Query: 426 QLG 428
            LG
Sbjct: 444 TLG 446



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 10/181 (5%)

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
           R    ++  G  HS  VT  G + +FG    GQ GHG+T D  +P    +L  I++ Q  
Sbjct: 144 RREKSQVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDGWQPRPIRALQGIRIIQAT 203

Query: 348 AGLWHTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           A    T+ IS  G+VY FG   F   ++G    +    P+L+E+  L++      + G  
Sbjct: 204 AATGRTMLISDSGQVYAFGKQYFCENEIGNEGSKMVTTPQLVES--LKNIFVVQAAIGNY 261

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLL 461
            +AVL+ +G+V ++ W   G+  L    D N     P+ G L       IA G+ + L L
Sbjct: 262 FTAVLSREGRVYTFSWGSDGK--LCHQTDPNDVEPRPLLGALEHIPVVQIAAGFCYLLCL 319

Query: 462 A 462
           A
Sbjct: 320 A 320



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 59/143 (41%), Gaps = 25/143 (17%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G+E   L P +V     VK   VAAG   T ++SD G  + +GYG  G LG         
Sbjct: 396 GNEECALVPKVVEELKNVKAVHVAAGDYTTFVVSDSGDAYSFGYGESGTLGHDPE----- 450

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR-----HSAVVTDAGA 309
                P  EH  +    P LV      +S K     V +I+         H+  +T++G 
Sbjct: 451 ----NPEQEHMHADVLTPKLV------TSMKQNYERVIQISLTNSVYWIAHTFALTESGK 500

Query: 310 LLTFGWGLYGQCGHGSTNDQLRP 332
           L  FG G  GQ G      +LRP
Sbjct: 501 LYAFGAGDKGQLG-----VELRP 518


>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1070

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 158/400 (39%), Gaps = 90/400 (22%)

Query: 62  FALATSESGKLITWGSADDEGQSYLTSGKHGETP----EPFPLPTEASVVKAAAGWAHCV 117
           F+LA    GK   WG  +  GQ    +     TP    +P  +PT+ + V+ +AG  H +
Sbjct: 571 FSLAVGSDGKAYAWGD-NTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSL 629

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
           ++   G VY WG          +   G  G    ++T   S++P     P+         
Sbjct: 630 ALGSDGYVYAWG----------SNQHGQLG----NNTKTNSSVPVRVRDPA--------- 666

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
                        NP                N G+K  +V+AG  H+L L   G V+ WG
Sbjct: 667 -------------NPTD-------------PNKGLKAIQVSAGDEHSLALDSNGYVYAWG 700

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
           +   G+LG                  ++ +    P+ VR  +  +    G   V +++ G
Sbjct: 701 WNDNGRLG-----------------NNSTTDSSVPVRVRDPASPTDPSKGLKAV-QVSAG 742

Query: 298 GRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMD-------IQVEQIAA 348
             HS  V   G   T+ WGL  YGQ G+ S N    P               ++  Q++A
Sbjct: 743 WHHSLAVGSDG--YTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSA 800

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK-----RAKVVSCG 403
           G  H++ +  +G  Y +G N +GQLG        VP  +  P          +A  ++ G
Sbjct: 801 GYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATAINAG 860

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
             HS  +  +G   +WGWN Y QLG G + + ++P  VP+
Sbjct: 861 GEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVP--VPV 898



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 85/192 (44%), Gaps = 29/192 (15%)

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRPSYASSLM----DIQ 342
           +YV  +A G    A          + WG   YGQ G  +TN +  P+          D  
Sbjct: 568 TYVFSLAVGSDGKA----------YAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFT 617

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK-----RA 397
             Q++AG WH++ +  +G VY +G NQ GQLG       +VP  +  P   +      +A
Sbjct: 618 YVQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKA 677

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--------PIHGFLPR 449
             VS G  HS  L  +G V +WGWN  G+LG   + D ++P  V        P  G    
Sbjct: 678 IQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAV 737

Query: 450 NIACGWWHTLLL 461
            ++ GW H+L +
Sbjct: 738 QVSAGWHHSLAV 749


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 15/245 (6%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++  V+ G  HT +++ MGQ++ +G G  G LG G  +K V  P  +  L    SG  
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGD-LKSVSYPREVESL----SGL- 236

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
           + + V  G  +++       + E+      S+V   AG L T+G G   + GHG    +L
Sbjct: 237 KTIAVACGVWHTAA------IVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRL 290

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
           +P+  ++L+D    ++A G   TV ++  G+V   G   +GQLG        +P L+E  
Sbjct: 291 KPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGR-IPCLVEDK 349

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPR 449
           I+  ++   ++CG+ H AVLT   +V +WG    G+LG GD+ DR +P+LV  +     R
Sbjct: 350 IV-GEQVLQIACGSYHVAVLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVR 408

Query: 450 NIACG 454
            IACG
Sbjct: 409 YIACG 413



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 4/177 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  + CG +H+A+V   G + T+G    G+ GHG+  D +RP    SL    V+ +A G 
Sbjct: 79  VYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGE 138

Query: 351 WHTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  ++  G +Y +G   +  G LG G D    +PK + +  LE  +   VSCG  H+A
Sbjct: 139 FHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRI-SGALEGLQVAYVSCGTWHTA 197

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           ++T  GQ+ ++G   +G LG GD    + P  V  + G     +ACG WHT  + E 
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEV 254



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 124/276 (44%), Gaps = 50/276 (18%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           N  + +  V  G +H  ++   G+V+ WG    G+LG G+R   V               
Sbjct: 74  NLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCV--------------- 118

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGST 326
             RP LV   +V        S V  +ACG  H+  VT  G L T+G G Y  G  GHG+ 
Sbjct: 119 --RPRLVESLTV--------SNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGND 168

Query: 327 NDQLRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
                P   S  ++ +QV  ++ G WHT  I+  G+++ FG   FG LG G  ++ + P+
Sbjct: 169 VGHWIPKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPR 228

Query: 386 LLETPILESKRAKVVSCGARHSAVLTE-------------DGQVLSWGWNKYGQLGLGDS 432
            +E+  L   +   V+CG  H+A + E              G++ +WG     +LG GD 
Sbjct: 229 EVES--LSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDK 286

Query: 433 IDRNIPSLVPI---HGFLPRNIACGWWHTLLLAETT 465
             R  P+ V     H F    +ACG  H+L +A TT
Sbjct: 287 ETRLKPTCVATLIDHDFY--RVACG--HSLTVALTT 318



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S + + V  +  G+ H   +   G V+ +G +  G+LG G  +    P+L+
Sbjct: 64  DILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLV 123

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPSLV--PI 443
           E+  L       V+CG  H+  +T  G++ +WG   Y  G LG G+ +   IP  +   +
Sbjct: 124 ES--LTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGAL 181

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G     ++CG WHT L+    Q+
Sbjct: 182 EGLQVAYVSCGTWHTALITSMGQL 205



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 67/166 (40%), Gaps = 33/166 (19%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  GQV   G    GQLG         
Sbjct: 284 GDKETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLG--------- 334

Query: 255 TPH---LIPCL-EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
            PH    IPCL E    G+                     V +IACG  H AV+T+   +
Sbjct: 335 NPHSDGRIPCLVEDKIVGEQ--------------------VLQIACGSYHVAVLTNRSEV 374

Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            T+G G  G+ GHG T D+  P+   +L D  V  IA G   T  I
Sbjct: 375 FTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGANFTAAI 420


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 118/251 (47%), Gaps = 31/251 (12%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           +   F   SP +V       I ++A G +H L L++ G+++ WG   EGQLGLG  I+  
Sbjct: 167 NSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRCE 226

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
             P LI  L                       AG   +  IACGG HS  ++ +GA+  F
Sbjct: 227 MKPKLINTL-----------------------AGVP-IAFIACGGYHSIAISKSGAI--F 260

Query: 314 GWG--LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           GWG   +GQ G   T ++  P    +L + +V   A G   +V ++V+G V+  G   +G
Sbjct: 261 GWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYG 320

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWGWNKYGQLGLG 430
           QLG G +  E +P+  +   L       +SCG RH+ A++   G+V +WG    GQLG  
Sbjct: 321 QLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNN 378

Query: 431 DSIDRNIPSLV 441
            +     P +V
Sbjct: 379 STRSTTTPQVV 389



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 99/182 (54%), Gaps = 7/182 (3%)

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           S +++IACG  ++ V+T  G + + G   YGQ GH     +L+      L     ++ A 
Sbjct: 82  SEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRLQ--LILGLDAFVFKKAAC 139

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ-AENVPKLLETPILESKRAKVVSCGARHS 407
           G +HT+ ++  G+++ +G N  GQLG       E  P++++T  L +     ++CG +H+
Sbjct: 140 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKT--LGTSIIVQIACGMKHA 197

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVPIHGFLP-RNIACGWWHTLLLAETT 465
             LT +G++ SWG N  GQLGLG  I   + P L+     +P   IACG +H++ ++++ 
Sbjct: 198 LALTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSG 257

Query: 466 QI 467
            I
Sbjct: 258 AI 259



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 12/162 (7%)

Query: 313 FGWG--LYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
           F WG   +G+ G G   D+  L P         +++QIA G  +TV I+ +G++Y  G N
Sbjct: 50  FCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGKIYSCGNN 109

Query: 369 QFGQLGTGVDQAENVPKLLETPI-LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
            +GQLG      E   K L+  + L++   K  +CGA H+  + E GQ+ SWG N  GQL
Sbjct: 110 DYGQLG-----HEQGRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSNSEGQL 164

Query: 428 GLG-DSIDRNIPSLVPIHGF-LPRNIACGWWHTLLLAETTQI 467
           GL   +     P +V   G  +   IACG  H L L    ++
Sbjct: 165 GLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGEL 206



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 1/106 (0%)

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           ++ +G  + G+LG G  + E +    E    ++   + ++CG  ++ V+T DG++ S G 
Sbjct: 49  MFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGKIYSCGN 108

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           N YGQLG      R +  ++ +  F+ +  ACG +HT+ + E  Q+
Sbjct: 109 NDYGQLGHEQGRKR-LQLILGLDAFVFKKAACGAYHTIAVNEWGQL 153



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCV 117
           G    +A +E G+L +WGS + EGQ  L S    E +P        + +V+ A G  H +
Sbjct: 140 GAYHTIAVNEWGQLFSWGS-NSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHAL 198

Query: 118 SVTEAGEVYTWG 129
           ++T  GE+Y+WG
Sbjct: 199 ALTNNGELYSWG 210


>gi|307190185|gb|EFN74300.1| X-linked retinitis pigmentosa GTPase regulator [Camponotus
           floridanus]
          Length = 807

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 48/284 (16%)

Query: 190 ENPASGDEFFTLSPCLVTLN--PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
           EN A GD   + SP L+      G +I ++AAG  H++IL+  G V  WG   EGQLGL 
Sbjct: 169 ENSAIGDS--SSSPILIYDCGLAGPRIVQIAAGSHHSMILTSDGGVVAWGSNLEGQLGLP 226

Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
               +V  P  +P  E                           VKEI+ G  HSA +T++
Sbjct: 227 GVSGLVNKPTKVPIPE--------------------------PVKEISAGYYHSAFLTES 260

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE------QIAAGLWHTVCISVEGR 361
           G +   G    G+ G       +  ++++ +   Q++       +  G  HT+ ++    
Sbjct: 261 GLVYVCGESESGKLG-------IDVNFSTQVAPKQMQLPTPAIHVTCGGHHTLVLAENSN 313

Query: 362 VYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           +Y  G N  GQLG G +  E ++PK L    L +++   ++CG  HSA+LTE G++ + G
Sbjct: 314 IYCSGSNASGQLGMGTNLNEIHMPKHLARGSLRNEKIVKIACGESHSAILTELGKLFTCG 373

Query: 421 WNKYGQLGLGDSIDRNIPSLV---PIHGFLPRNIACGWWHTLLL 461
             ++G+LGL ++ + N+  +            N+ACG  HT+L+
Sbjct: 374 DGRHGKLGLEEN-ENNVHEVTFAAKYQELFITNVACGGCHTILV 416



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 93/175 (53%), Gaps = 5/175 (2%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           I CG  HSAV+  +G L  FG   +GQ G G  N   +PS    L   +V  +A G  HT
Sbjct: 87  IECGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKILKPEKVTHVACGRAHT 146

Query: 354 VCISVEGRVYVFGGNQFGQLG---TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           +  +   +++  G NQ GQLG   + +  + + P L+    L   R   ++ G+ HS +L
Sbjct: 147 LICTGAQKIFACGSNQEGQLGRENSAIGDSSSSPILIYDCGLAGPRIVQIAAGSHHSMIL 206

Query: 411 TEDGQVLSWGWNKYGQLGL-GDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           T DG V++WG N  GQLGL G S   N P+ VPI   + + I+ G++H+  L E+
Sbjct: 207 TSDGGVVAWGSNLEGQLGLPGVSGLVNKPTKVPIPEPV-KEISAGYYHSAFLTES 260



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 126/320 (39%), Gaps = 85/320 (26%)

Query: 40  SPIPARLCG--GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
           SPI    CG  G     +  G     + TS+ G ++ WGS + EGQ  L  G  G   +P
Sbjct: 179 SPILIYDCGLAGPRIVQIAAGSHHSMILTSDGG-VVAWGS-NLEGQLGL-PGVSGLVNKP 235

Query: 98  FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
             +P    V + +AG+ H   +TE+G VY  G  E   S K+  D     +F      KQ
Sbjct: 236 TKVPIPEPVKEISAGYYHSAFLTESGLVYVCGESE---SGKLGIDV----NFSTQVAPKQ 288

Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
             LPT                                               P + +T  
Sbjct: 289 MQLPT-----------------------------------------------PAIHVT-- 299

Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
             GG HTL+L++   ++  G    GQLG+G+ +  +  P      +H A G  R      
Sbjct: 300 -CGGHHTLVLAENSNIYCSGSNASGQLGMGTNLNEIHMP------KHLARGSLR------ 346

Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG-HGSTNDQLRPSYAS 336
                        + +IACG  HSA++T+ G L T G G +G+ G   + N+    ++A+
Sbjct: 347 ----------NEKIVKIACGESHSAILTELGKLFTCGDGRHGKLGLEENENNVHEVTFAA 396

Query: 337 SLMDIQVEQIAAGLWHTVCI 356
              ++ +  +A G  HT+ +
Sbjct: 397 KYQELFITNVACGGCHTILV 416


>gi|332261039|ref|XP_003279586.1| PREDICTED: protein RCC2 [Nomascus leucogenys]
          Length = 448

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 73  GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 129

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 130 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 167

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 168 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 226

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 227 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 286

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 287 RLGHAEQKDEMVPRLVKLFDF 307



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 102 RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 161

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 162 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 196

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 197 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 256

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 257 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 316

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 317 AGYTCSFAVSEVGGLFFWG 335



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           SC A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   +  + ACG  HTL
Sbjct: 83  SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 141

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 142 ALTETGSV 149


>gi|440897095|gb|ELR48863.1| Protein RCC2, partial [Bos grunniens mutus]
          Length = 427

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P L+  L H    
Sbjct: 52  GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLVEGLSHEV-- 108

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 109 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 146

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 147 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 205

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 206 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 265

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 266 RLGHAEQKDEMVPRLVKLFDF 286



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 104/259 (40%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P LV       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 81  RNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 140

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 141 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 175

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 176 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 235

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 236 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 295

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 296 AGYTCSFAVSEVGGLFFWG 314



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 392 LESKRAKVVSCG--ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
           L   R + V  G  A HS ++T +G++ SWG N+ GQLG GD+     P LV  +   + 
Sbjct: 50  LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVI 109

Query: 449 RNIACGWWHTLLLAETTQI 467
            + ACG  HTL L ET  +
Sbjct: 110 VSAACGRNHTLALTETGSV 128


>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
          Length = 963

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 29/206 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI------PCLEHAAS 267
           I ++  G  H+L LS  G+++ WG   +GQLG+G       TP ++      P ++ +A 
Sbjct: 154 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 213

Query: 268 GKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVVT 305
                 L   G+V S G+        G +Y K+               +ACGG H+A++T
Sbjct: 214 EAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGSHTALLT 273

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYV 364
            +G + TFG G YGQ GH ST ++LRP   + L+  +V QIA G  HT+  +S  G+V+ 
Sbjct: 274 KSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTLAYVSDMGKVFS 333

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETP 390
           FG  + GQLG G    + +P+ ++ P
Sbjct: 334 FGSGKEGQLGNGGTCNQLMPRPMKLP 359



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 118/259 (45%), Gaps = 41/259 (15%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  + L   +KI  +  G  H L+LS  G+ + + Y                       +
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS----------------------I 140

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           EHA   + + +L  +  +            +I CG  HS  ++  G L  +G  L GQ G
Sbjct: 141 EHA---RFQCILQEKNII------------QITCGDYHSLALSKGGELFAWGQNLDGQLG 185

Query: 323 HGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G        P    +L  + + QI+AG  H++ +S+ G VY +G N  GQLG G    +
Sbjct: 186 VGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNK 245

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           + P  +E   L+ ++ + ++CG  H+A+LT+ G V ++G  KYGQLG   + +   P LV
Sbjct: 246 DSPSCIEA--LDDQKVEFLACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLV 303

Query: 442 P-IHGFLPRNIACGWWHTL 459
             + G     IACG  HTL
Sbjct: 304 AGLVGNRVTQIACGRQHTL 322



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 36/226 (15%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADD----EGQSYLTSGKHGETPEPFPLPTEASV 106
           K++    CG   +LA S+ G+L  WG   D     G+ + ++     TPE     +   +
Sbjct: 152 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPL 207

Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
           V+ +AG AH ++++ +G VY+WG  +C          G   ++ KDS     AL      
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKDSPSCIEAL------ 254

Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITK 216
             D++          T+   +       GD  +           L PCLV    G ++T+
Sbjct: 255 -DDQKVEFLACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQ 313

Query: 217 VAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIP 260
           +A G +HTL  +SDMG+V+ +G G EGQLG G    +++P P  +P
Sbjct: 314 IACGRQHTLAYVSDMGKVFSFGSGKEGQLGNGGTCNQLMPRPMKLP 359



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 29/231 (12%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           E ++++   G  H +++++ GE++ WG +       V R F S  +   +     S +P 
Sbjct: 151 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 207

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
            Q    +  +    +     S  R +      G  +   SP  +      K+  +A GG 
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGS 267

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
           HT +L+  G V+ +G G  GQLG                  ++   + RP LV       
Sbjct: 268 HTALLTKSGLVFTFGDGKYGQLG-----------------HNSTQNELRPCLV------- 303

Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
           +G  G   V +IACG +H+ A V+D G + +FG G  GQ G+G T +QL P
Sbjct: 304 AGLVGNR-VTQIACGRQHTLAYVSDMGKVFSFGSGKEGQLGNGGTCNQLMP 353



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 12/137 (8%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLET--- 389
           +   L +  + QI  G +H++ +S  G ++ +G N  GQLG G +  + + P+++E    
Sbjct: 145 FQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSG 204

Query: 390 -PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFL 447
            P+++      +S G  HS  L+  G V SWG N  GQLGLG + +++ PS +  +    
Sbjct: 205 VPLVQ------ISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQK 258

Query: 448 PRNIACGWWHTLLLAET 464
              +ACG  HT LL ++
Sbjct: 259 VEFLACGGSHTALLTKS 275


>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
          Length = 2101

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 125/265 (47%), Gaps = 35/265 (13%)

Query: 210  PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
            P  ++ ++A G RHT +++D   ++ +G+G  G+LG G++           C E  + G 
Sbjct: 1741 PLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQED---------CTEPVSVGY 1791

Query: 270  DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
               L+        +       V E++CG  H+  VT +G L  FGWG  G+ G G T   
Sbjct: 1792 FTSLI-------EAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSS 1844

Query: 330  LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            L P+  + L +I    +A G  HT+ ++ +GRV+ FG    G+LG G +  E +P  ++ 
Sbjct: 1845 LYPTRVTDLQNIAA--VACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQG 1902

Query: 390  PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-------P 442
              LE  R   +  G  HS  L+ +G VL+WG+   G LG GD  +   P  +        
Sbjct: 1903 --LEDYRIAAIDAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNA 1960

Query: 443  IHG--------FLPRNIACGWWHTL 459
            I G         +   IACG +HTL
Sbjct: 1961 IDGEENQASETSVVSAIACGSYHTL 1985



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 156/404 (38%), Gaps = 87/404 (21%)

Query: 98   FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS-FQKD---- 152
            FP P    VV+ A G+ H   +T+   +YT+G  EC          G  G   Q+D    
Sbjct: 1738 FPRPLR-RVVQIACGYRHTALITDDRHLYTFGHGEC----------GRLGHGNQEDCTEP 1786

Query: 153  -STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF------------- 198
             S G  ++L  E          E    R  T +        ASGD F             
Sbjct: 1787 VSVGYFTSL-IEAEGVDVGGVVEVSCGREHTMAV------TASGDLFGFGWGEAGRLGTG 1839

Query: 199  ---FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
                +L P  VT      I  VA G  HTL L+  G+V+ +G G  G+LG GS       
Sbjct: 1840 ETGSSLYPTRVT--DLQNIAAVACGREHTLALTRKGRVFAFGAGFGGRLGNGSE------ 1891

Query: 256  PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                       + ++ P  V QG  +         +  I  G  HS  ++  G +LT+G+
Sbjct: 1892 -----------TDEELPFAV-QGLEDYR-------IAAIDAGECHSCALSTEGDVLTWGF 1932

Query: 316  GLYGQCGHGSTNDQLRPS-----YASSLMDIQVEQ---------IAAGLWHTVCISVEGR 361
            G  G  GHG  ++ L P      +  + +D +  Q         IA G +HT+  + +G 
Sbjct: 1933 GSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHTLAATSDGA 1992

Query: 362  VYVFGGNQFGQLG----TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
            +Y +G    GQL     T  +     P+ +  P     R+  V+CG   SAV T  G + 
Sbjct: 1993 LYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGIRS--VACGTFTSAVCTNQGHLF 2050

Query: 418  SWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
             WG    G     +  D  +  +  +  F    +ACG +H + +
Sbjct: 2051 LWGSPAAGNGAPLEVDDARVKRIGVLGEFEFSQVACGAYHAVAI 2094


>gi|296083842|emb|CBI24230.3| unnamed protein product [Vitis vinifera]
          Length = 953

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 130/254 (51%), Gaps = 15/254 (5%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A GGRH  +++  G+++ WG    G+LG G    ++  P LI  L     E  A
Sbjct: 244 LDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVL-HPKLIDSLSNTNIELVA 302

Query: 267 SGKDRPLLVR-QGSVNSSGKAGRSYVKEIA---CGGRHSAVVTDAGALLTFGWGLYGQCG 322
            G+     V   G + + G    ++V +        R +A+   +G L T+G G  G+ G
Sbjct: 303 CGEYHTCAVTLSGDLYTWGDGTYNFVFQNPGKWSPSRATALNCSSGKLFTWGDGDKGRLG 362

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE- 381
           HG    +L P+  ++L+D    ++A G   TV ++  G VY  G   +GQLG    QA+ 
Sbjct: 363 HGDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN--PQADG 420

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            +P  +E  + +S   + ++CGA H AVLT   +V +WG    G+LG GD+ DRN P+LV
Sbjct: 421 KLPTRVEGKLAKS-FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLV 479

Query: 442 -PIHGFLPRNIACG 454
             +     ++IACG
Sbjct: 480 EALKDKQVKSIACG 493



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 38/212 (17%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGGRH+A+VT  G + ++G    G+ GHG  +D L P    SL +  +E +A G 
Sbjct: 246 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGE 305

Query: 351 WHTVCISVEGRVYVFGGNQF---------------------------------GQLGTGV 377
           +HT  +++ G +Y +G   +                                 G+LG G 
Sbjct: 306 YHTCAVTLSGDLYTWGDGTYNFVFQNPGKWSPSRATALNCSSGKLFTWGDGDKGRLGHGD 365

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
            +A+ VP  +    L       V+CG   +  LT  G V + G   YGQLG     D  +
Sbjct: 366 KEAKLVPTCVAA--LVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKL 422

Query: 438 PSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           P+ V   +       IACG +H  +L   T++
Sbjct: 423 PTRVEGKLAKSFVEEIACGAYHVAVLTSRTEV 454



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 29/190 (15%)

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
           R T +    G+++ WG G +G+LG G +  K+VPT     C+         P   R    
Sbjct: 339 RATALNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT-----CVAALVD----PNFCR---- 385

Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
                        +ACG   +  +T +G + T G  +YGQ G+   + +L       L  
Sbjct: 386 -------------VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAK 432

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
             VE+IA G +H   ++    VY +G    G+LG G     N P L+E   L+ K+ K +
Sbjct: 433 SFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEA--LKDKQVKSI 490

Query: 401 SCGARHSAVL 410
           +CG   +A +
Sbjct: 491 ACGTNFTATI 500



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 69/162 (42%), Gaps = 25/162 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G V+  G    GQLG       +P
Sbjct: 364 GDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP 423

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           T                            GK  +S+V+EIACG  H AV+T    + T+G
Sbjct: 424 T-------------------------RVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWG 458

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  G+ GHG T+D+  P+   +L D QV+ IA G   T  I
Sbjct: 459 KGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATI 500


>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
           DW4/3-1]
          Length = 860

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 177/449 (39%), Gaps = 82/449 (18%)

Query: 41  PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P PA    GD             LA    G +  WG     G   L +G   +   P  +
Sbjct: 145 PAPAVSAAGD-----------HTLALRRDGTVWAWGF---NGSGQLGNGTATDRATPVQV 190

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
           P   SV+  AA  AH +++   G V+ WG             +G  G    D T  Q   
Sbjct: 191 PGLTSVMAVAASEAHSLALRSDGTVWAWG----------DNGYGQLG----DGTKAQRTT 236

Query: 161 PTEQAPPSDKRA------GEEVVKRRKTSSAREES------ENPAS--GDEFFTLSPCLV 206
           P +    +   A      G  V     + + R +       +N A   GD   T     V
Sbjct: 237 PVQVLGLAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPV 296

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-- 264
            +     +T +AAG  H+L L D G VW WG    GQLG G+     PTP  +P L    
Sbjct: 297 QVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTAR-PTPVQVPGLTSVI 355

Query: 265 --AASGKDRPLLVR---------QGSV-----NSSGKAGRSY---------VKEI----- 294
             AA G D  L +R          G+V     N S + G            V E+     
Sbjct: 356 AVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGTA 415

Query: 295 -ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
              G  H+ V+   G +  +G    GQ G G T  + +P   S L  I    +A G  H+
Sbjct: 416 LVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITA--LATGDGHS 473

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           V +  +G ++ +G N+ GQLG G+     +P  ++   L S  A  ++ G  HS  L  +
Sbjct: 474 VAVGSDGGIWAWGDNRRGQLGIGITATREIP--VQATGLASISA--LAAGDSHSLALRGN 529

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
           G V +WG N YGQLG G +IDR   + VP
Sbjct: 530 GSVWTWGSNAYGQLGDGTAIDRATAAQVP 558



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 173/414 (41%), Gaps = 58/414 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA---- 114
           G   +LA  + G +  WG+ +  GQ  L  G     P P  +P   SV+  AAG      
Sbjct: 310 GAFHSLALRDDGTVWAWGN-NSSGQ--LGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSL 366

Query: 115 -----HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA-PPS 168
                H +++   G V+ WG+        ++R FG      + +  + S L    A    
Sbjct: 367 GMRGDHSLALKSDGTVWAWGY-------NLSRQFGDGMPATRTTPVQVSELTGGTALVAG 419

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           D  A   V+K   T  A  ++ +   G+    +    + ++    IT +A G  H++ + 
Sbjct: 420 DLHA--VVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVG 477

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
             G +W WG    GQLG+G     +     IP                          G 
Sbjct: 478 SDGGIWAWGDNRRGQLGIG-----ITATREIPVQ----------------------ATGL 510

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           + +  +A G  HS  +   G++ T+G   YGQ G G+  D+   +    L DI    +AA
Sbjct: 511 ASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDITA--LAA 568

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G  H++ +  +G V+V+G N FGQLG G   +   P  ++   L + RA  V  G  HS 
Sbjct: 569 GNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTP--VQVSGLSAMRA--VEAGPAHSV 624

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-IACGWWHTLLL 461
            +  +G V  WG N +GQLG G    R +P  V + G      +A G +H+L L
Sbjct: 625 AVHLNGTVWVWGNNDFGQLGDGTVTSRAMP--VQVSGLTGVTAVAVGVYHSLAL 676



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 114/254 (44%), Gaps = 31/254 (12%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGK 269
            I+ +AAG  H+L L   G VW WG    GQLG G+ I    T   +P L      A+G 
Sbjct: 512 SISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRA-TAAQVPGLTDITALAAGN 570

Query: 270 DRPLLVRQ-----------------GSVNSSGK----AGRSYVKEIACGGRHSAVVTDAG 308
              L +R                  G+V S       +G S ++ +  G  HS  V   G
Sbjct: 571 HHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLNG 630

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            +  +G   +GQ G G+   +  P   S L    V  +A G++H++ +  +G ++ +G N
Sbjct: 631 TVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTG--VTAVAVGVYHSLALRNDGTLWAWGYN 688

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             GQLG G    ++ P   + P L    A  ++ G  HS  L  DG V  WG N +GQLG
Sbjct: 689 NVGQLGNGTSGIQSTPA--QVPGLTGVIA--LAAGNGHSLALRTDGTVWGWGANSFGQLG 744

Query: 429 LGDSIDRNIPSLVP 442
            G +  R+ P+ VP
Sbjct: 745 DGTTTPRSTPTQVP 758



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 161/406 (39%), Gaps = 71/406 (17%)

Query: 33  PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
           P ++  L+ I A L  GDS           +LA   +G + TWGS +  GQ  L  G   
Sbjct: 504 PVQATGLASISA-LAAGDS----------HSLALRGNGSVWTWGS-NAYGQ--LGDGTAI 549

Query: 93  ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
           +      +P    +   AAG  H +++   G V+ WG          + DFG  G    D
Sbjct: 550 DRATAAQVPGLTDITALAAGNHHSLALRNDGTVWVWG----------SNDFGQLG----D 595

Query: 153 STGKQSALPTEQAPPSDKRAGEE------VVKRRKTSSAREESENPASGDEFFTLSPCLV 206
            T      P + +  S  RA E        V    T      ++    GD   T     V
Sbjct: 596 GTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPV 655

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
            ++    +T VA G  H+L L + G +W WGY   GQLG G+   +  TP  +P      
Sbjct: 656 QVSGLTGVTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTS-GIQSTPAQVP------ 708

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
                               G + V  +A G  HS  +   G +  +G   +GQ G G+T
Sbjct: 709 --------------------GLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTT 748

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
             +  P+    L +  V  + AG ++TV +  E  V+ +G    GQLG G    +     
Sbjct: 749 TPRSTPTQVPGLTN--VIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKT---- 802

Query: 387 LETPILESKRAKV--VSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
             TP+  S    V  ++ G  H+  L  D  V +WG N+ GQ+G G
Sbjct: 803 --TPVQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDG 846



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 123/278 (44%), Gaps = 35/278 (12%)

Query: 210 PGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE----- 263
           PG+  IT +AAG  H+L L + G VW WG    GQLG G+ +    TP  +  L      
Sbjct: 558 PGLTDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGT-VTSRKTPVQVSGLSAMRAV 616

Query: 264 -----HAAS----------GKDRPLLVRQGSVNSSGK----AGRSYVKEIACGGRHSAVV 304
                H+ +          G +    +  G+V S       +G + V  +A G  HS  +
Sbjct: 617 EAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTGVTAVAVGVYHSLAL 676

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
            + G L  +G+   GQ G+G++  Q  P+    L    V  +AAG  H++ +  +G V+ 
Sbjct: 677 RNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTG--VIALAAGNGHSLALRTDGTVWG 734

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G N FGQLG G     + P   + P L +  A  ++ GA ++  L  +  V  WG    
Sbjct: 735 WGANSFGQLGDGTTTPRSTPT--QVPGLTNVIA--LNAGAFYTVALRSERSVWEWGSKSA 790

Query: 425 GQLGLGDSIDRNIPSLVPIHGFLPRN-IACGWWHTLLL 461
           GQLG G    +  P  V + G      +A G  H L L
Sbjct: 791 GQLGDGTVTQKTTP--VQVSGLTDVTALAAGNAHALAL 826


>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 859

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 177/449 (39%), Gaps = 82/449 (18%)

Query: 41  PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P PA    GD             LA    G +  WG     G   L +G   +   P  +
Sbjct: 144 PAPAVSAAGD-----------HTLALRRDGTVWAWGF---NGSGQLGNGTATDRATPVQV 189

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
           P   SV+  AA  AH +++   G V+ WG             +G  G    D T  Q   
Sbjct: 190 PGLTSVMAVAASEAHSLALRSDGTVWAWG----------DNGYGQLG----DGTKAQRTT 235

Query: 161 PTEQAPPSDKRA------GEEVVKRRKTSSAREES------ENPAS--GDEFFTLSPCLV 206
           P +    +   A      G  V     + + R +       +N A   GD   T     V
Sbjct: 236 PVQVLGLAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPV 295

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-- 264
            +     +T +AAG  H+L L D G VW WG    GQLG G+     PTP  +P L    
Sbjct: 296 QVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTAR-PTPVQVPGLTSVI 354

Query: 265 --AASGKDRPLLVR---------QGSV-----NSSGKAGRSY---------VKEI----- 294
             AA G D  L +R          G+V     N S + G            V E+     
Sbjct: 355 AVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGTA 414

Query: 295 -ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
              G  H+ V+   G +  +G    GQ G G T  + +P   S L  I    +A G  H+
Sbjct: 415 LVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITA--LATGDGHS 472

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           V +  +G ++ +G N+ GQLG G+     +P  ++   L S  A  ++ G  HS  L  +
Sbjct: 473 VAVGSDGGIWAWGDNRRGQLGIGITATREIP--VQATGLASISA--LAAGDSHSLALRGN 528

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
           G V +WG N YGQLG G +IDR   + VP
Sbjct: 529 GSVWTWGSNAYGQLGDGTAIDRATAAQVP 557



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 173/414 (41%), Gaps = 58/414 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA---- 114
           G   +LA  + G +  WG+ +  GQ  L  G     P P  +P   SV+  AAG      
Sbjct: 309 GAFHSLALRDDGTVWAWGN-NSSGQ--LGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSL 365

Query: 115 -----HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA-PPS 168
                H +++   G V+ WG+        ++R FG      + +  + S L    A    
Sbjct: 366 GMRGDHSLALKSDGTVWAWGY-------NLSRQFGDGMPATRTTPVQVSELTGGTALVAG 418

Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           D  A   V+K   T  A  ++ +   G+    +    + ++    IT +A G  H++ + 
Sbjct: 419 DLHA--VVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVG 476

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
             G +W WG    GQLG+G     +     IP                          G 
Sbjct: 477 SDGGIWAWGDNRRGQLGIG-----ITATREIPVQ----------------------ATGL 509

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           + +  +A G  HS  +   G++ T+G   YGQ G G+  D+   +    L DI    +AA
Sbjct: 510 ASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDITA--LAA 567

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G  H++ +  +G V+V+G N FGQLG G   +   P  ++   L + RA  V  G  HS 
Sbjct: 568 GNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTP--VQVSGLSAMRA--VEAGPAHSV 623

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-IACGWWHTLLL 461
            +  +G V  WG N +GQLG G    R +P  V + G      +A G +H+L L
Sbjct: 624 AVHLNGTVWVWGNNDFGQLGDGTVTSRAMP--VQVSGLTGVTAVAVGVYHSLAL 675



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 114/254 (44%), Gaps = 31/254 (12%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGK 269
            I+ +AAG  H+L L   G VW WG    GQLG G+ I    T   +P L      A+G 
Sbjct: 511 SISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRA-TAAQVPGLTDITALAAGN 569

Query: 270 DRPLLVRQ-----------------GSVNSSGK----AGRSYVKEIACGGRHSAVVTDAG 308
              L +R                  G+V S       +G S ++ +  G  HS  V   G
Sbjct: 570 HHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLNG 629

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            +  +G   +GQ G G+   +  P   S L    V  +A G++H++ +  +G ++ +G N
Sbjct: 630 TVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTG--VTAVAVGVYHSLALRNDGTLWAWGYN 687

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
             GQLG G    ++ P   + P L    A  ++ G  HS  L  DG V  WG N +GQLG
Sbjct: 688 NVGQLGNGTSGIQSTPA--QVPGLTGVIA--LAAGNGHSLALRTDGTVWGWGANSFGQLG 743

Query: 429 LGDSIDRNIPSLVP 442
            G +  R+ P+ VP
Sbjct: 744 DGTTTPRSTPTQVP 757



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 161/406 (39%), Gaps = 71/406 (17%)

Query: 33  PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
           P ++  L+ I A L  GDS           +LA   +G + TWGS +  GQ  L  G   
Sbjct: 503 PVQATGLASISA-LAAGDS----------HSLALRGNGSVWTWGS-NAYGQ--LGDGTAI 548

Query: 93  ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
           +      +P    +   AAG  H +++   G V+ WG          + DFG  G    D
Sbjct: 549 DRATAAQVPGLTDITALAAGNHHSLALRNDGTVWVWG----------SNDFGQLG----D 594

Query: 153 STGKQSALPTEQAPPSDKRAGEE------VVKRRKTSSAREESENPASGDEFFTLSPCLV 206
            T      P + +  S  RA E        V    T      ++    GD   T     V
Sbjct: 595 GTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPV 654

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
            ++    +T VA G  H+L L + G +W WGY   GQLG G+   +  TP  +P      
Sbjct: 655 QVSGLTGVTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTS-GIQSTPAQVP------ 707

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
                               G + V  +A G  HS  +   G +  +G   +GQ G G+T
Sbjct: 708 --------------------GLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTT 747

Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
             +  P+    L +  V  + AG ++TV +  E  V+ +G    GQLG G    +     
Sbjct: 748 TPRSTPTQVPGLTN--VIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKT---- 801

Query: 387 LETPILESKRAKV--VSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
             TP+  S    V  ++ G  H+  L  D  V +WG N+ GQ+G G
Sbjct: 802 --TPVQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDG 845



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 123/278 (44%), Gaps = 35/278 (12%)

Query: 210 PGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE----- 263
           PG+  IT +AAG  H+L L + G VW WG    GQLG G+ +    TP  +  L      
Sbjct: 557 PGLTDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGT-VTSRKTPVQVSGLSAMRAV 615

Query: 264 -----HAAS----------GKDRPLLVRQGSVNSSGK----AGRSYVKEIACGGRHSAVV 304
                H+ +          G +    +  G+V S       +G + V  +A G  HS  +
Sbjct: 616 EAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTGVTAVAVGVYHSLAL 675

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
            + G L  +G+   GQ G+G++  Q  P+    L    V  +AAG  H++ +  +G V+ 
Sbjct: 676 RNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTG--VIALAAGNGHSLALRTDGTVWG 733

Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
           +G N FGQLG G     + P   + P L +  A  ++ GA ++  L  +  V  WG    
Sbjct: 734 WGANSFGQLGDGTTTPRSTPT--QVPGLTNVIA--LNAGAFYTVALRSERSVWEWGSKSA 789

Query: 425 GQLGLGDSIDRNIPSLVPIHGFLPRN-IACGWWHTLLL 461
           GQLG G    +  P  V + G      +A G  H L L
Sbjct: 790 GQLGDGTVTQKTTP--VQVSGLTDVTALAAGNAHALAL 825


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212  VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 2336 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 2378

Query: 272  PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 2379 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 2430

Query: 332  PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
            P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 2431 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 2490

Query: 384  ----------------------------------------------PKLLETPILESKRA 397
                                                          P+++E   L  K+ 
Sbjct: 2491 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 2548

Query: 398  KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
              V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 2549 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 2608

Query: 457  HTL 459
            H++
Sbjct: 2609 HSV 2611



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 3316 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3375

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 3376 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3435

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 3436 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3495

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 3496 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 3553

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 3554 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3603



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 3331 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 3390

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 3391 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 3434

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 3435 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 3477

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +      ++S    G   V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 3478 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 3529

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 3530 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 3587

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 3588 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 3622



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57   GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
             GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 2287 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 2344

Query: 113  WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
              H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 2345 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 2394

Query: 173  GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                     TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 2395 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 2454

Query: 225  LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
            L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 2455 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 2495

Query: 285  KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                  V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 2496 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 2549

Query: 345  QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
             +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 2550 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 2607

Query: 405  RHSAVLT 411
             HS   T
Sbjct: 2608 SHSVAWT 2614



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 50/274 (18%)

Query: 231  GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
            G ++GWG+   GQLG   G+++K VPTP    C    A    RP+ +  G     +V + 
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 3292

Query: 284  GK----------------------------AGRSYVKEIAC--GGRHSAVVTDAGALLTF 313
            GK                                ++K++A   GG+H   ++  G + ++
Sbjct: 3293 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3352

Query: 314  GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
            G    G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+L
Sbjct: 3353 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3412

Query: 374  GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G    + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G 
Sbjct: 3413 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3470

Query: 432  SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S    +P  +  + G     + CG   ++ L ++
Sbjct: 3471 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3504



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209  NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
            N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 2228 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2278

Query: 267  SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
            S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 2279 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 2318

Query: 327  NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
            +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 2319 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 2378

Query: 384  PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 2379 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 2436

Query: 444  -HGFLPRNIACGWWHTLLLAETTQ 466
              G     +ACG      LA T +
Sbjct: 2437 LLGHRVIQVACGSRDAQTLALTDE 2460



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 3494 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3552

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 3553 CTEDGEVYTWG 3563



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 3341 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3392

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 3393 ACVTAAGDLYTWG 3405


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           VK   V +GGRH   L+  G+V+ WG G +G+LG  SR+                   D+
Sbjct: 640 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 682

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P L+       + K  R  +++IACG  HSA +T +G L T+G G YG+ GHG    QL+
Sbjct: 683 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 734

Query: 332 PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
           P     L+  +V Q+A G     T+ ++ EG V+ +G   FG+LG G  +  N+      
Sbjct: 735 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 794

Query: 384 ----------------------------------------------PKLLETPILESKRA 397
                                                         P+++E   L  K+ 
Sbjct: 795 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 852

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
             V+ GA H   +T+ GQV +WG N +GQ G G +     P+LV  + G     +ACG  
Sbjct: 853 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 912

Query: 457 HTL 459
           H++
Sbjct: 913 HSV 915



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)

Query: 202  SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
            +P L+     V I KVA  +GG+H L LS  G+V+ WG   +G+LG G+R      +++ 
Sbjct: 1620 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 1679

Query: 255  TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
            +   I  ++ AA G     +   G + +   G+ GR                      V 
Sbjct: 1680 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 1739

Query: 293  EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
            +IACG     +  +TD   + ++G G YG+ G G ++    P    SL  + V ++  G 
Sbjct: 1740 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 1799

Query: 351  WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
              +V ++  G VY +G   + +LG G D     P+ ++   L+ K+   ++ G+ H    
Sbjct: 1800 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 1857

Query: 411  TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
            TEDG+V +WG N  GQLG G +     P LV  + G     +ACG  HTL
Sbjct: 1858 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 1907



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)

Query: 107  VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
            V   +G  HC++++  GEVY+WG           R      +V             + G 
Sbjct: 1635 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 1694

Query: 157  QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
             SA  T         AG+     K R       +SE+         L P LV    G ++
Sbjct: 1695 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 1738

Query: 215  TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
              +A  +G   TL L+D   VW WG G  G+LG G                  + G   P
Sbjct: 1739 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 1781

Query: 273  LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            + +   S+   G      V ++ CG + S  +T +GA+ T+G G Y + GHGS +   RP
Sbjct: 1782 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 1833

Query: 333  SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                 L   +V  IA G  H VC + +G VY +G N  GQLG G   A   P+L+    L
Sbjct: 1834 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 1891

Query: 393  ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            + K+   V+CG+ H+         L+W  +K    G        +P+ VP+
Sbjct: 1892 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 1926



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)

Query: 57  GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
            GG     A +  GK+   G A +       S   G  P P  +   +S VVK  A   G
Sbjct: 591 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 648

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
             H  ++T  G+V++WG            D G  G F + +  K   +   +       A
Sbjct: 649 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 698

Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
                    TSS         E      GD    L P +V +  G ++ +VA G R   T
Sbjct: 699 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 758

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
           L L+D G V+ WG G  G+LG G                  + G + P  + +  +N  G
Sbjct: 759 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 799

Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                 V +I CG + S  +T +G + T+G G Y + GHGS     +P     L   ++ 
Sbjct: 800 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 853

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
            +A G  H + ++  G+VY +G N  GQ G G       P L++   LE ++   V+CG+
Sbjct: 854 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 911

Query: 405 RHSAVLT 411
            HS   T
Sbjct: 912 SHSVAWT 918



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 36/269 (13%)

Query: 202  SPC--LVTLNPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            +PC  L TL P   I     GG  TL  ++  G+++  GYG  G+LG     + V TP L
Sbjct: 1570 TPCEALATLRPVQLI-----GGEQTLFAVTADGKLYATGYGAGGRLG-IGGTESVSTPTL 1623

Query: 259  IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
            +  ++H        + +++ +VNS              GG+H   ++  G + ++G    
Sbjct: 1624 LESIQH--------VFIKKVAVNS--------------GGKHCLALSSEGEVYSWGEAED 1661

Query: 319  GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
            G+ GHG+ +   RP    SL  I+V  +AAG  H+ C++  G +Y +G  ++G+LG    
Sbjct: 1662 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 1721

Query: 379  QAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            + +  PKL+E   L+  R   ++CG+    +  LT+D  V SWG   YG+LG G S    
Sbjct: 1722 EDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 1779

Query: 437  IPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            +P  +  + G     + CG   ++ L ++
Sbjct: 1780 VPMKIDSLTGLGVVKVECGSQFSVALTKS 1808



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)

Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
           N G  I K AAG      +    +V+ WG   + QLG   GS+IK       +P      
Sbjct: 532 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 582

Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
           S  +                    V ++A G +    VT  G +   G    G+ G G +
Sbjct: 583 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 622

Query: 327 NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           +  +  P   ++L    V+++A  +G  H   ++V+G+V+ +G    G+LG       + 
Sbjct: 623 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 682

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
           P+L+E   L++KR + ++CG+ HSA LT  G++ +WG  +YG+LG GD+  +  P +V +
Sbjct: 683 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 740

Query: 444 -HGFLPRNIACGWWHTLLLAETTQ 466
             G     +ACG      LA T +
Sbjct: 741 LLGHRVIQVACGSRDAQTLALTDE 764



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F++A ++SG + TWG  D     +  S  H   P          V+  A G  HCV 
Sbjct: 1798 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1856

Query: 119  VTEAGEVYTWG 129
             TE GEVYTWG
Sbjct: 1857 CTEDGEVYTWG 1867



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 313  FGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            +GWG    GQ G         P+   +L  ++  Q+  G      ++ +G++Y  G    
Sbjct: 1548 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 1607

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            G+LG G  ++ + P LLE+      +   V+ G +H   L+ +G+V SWG  + G+LG G
Sbjct: 1608 GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 1667

Query: 431  DSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
            +    + P ++  + G    ++A G  H+
Sbjct: 1668 NRSPCDRPRVIESLRGIEVVDVAAGGAHS 1696



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 64   LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
            LA S  G++ +WG A+D        GK G    +P   P   E+     VV  AAG AH 
Sbjct: 1645 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 1696

Query: 117  VSVTEAGEVYTWG 129
              VT AG++YTWG
Sbjct: 1697 ACVTAAGDLYTWG 1709


>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
 gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
          Length = 1286

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 106/227 (46%), Gaps = 33/227 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           +T +AAGG  +L L   G VW WG  G+G+LG G+                     DR +
Sbjct: 186 VTAIAAGGYFSLALKSDGTVWAWGVNGDGELGDGTT-------------------TDRYV 226

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
            V+         AG + V  IA GG HS  VT  G +  +G   YG  G G+  ++ RP 
Sbjct: 227 PVQ--------VAGLTDVMAIAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRTNRTRPV 278

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
              +L  I    +A G +H++ +   G V+ +G N   QLG G     N   L+  P+  
Sbjct: 279 QIKNLQHIVA--VAGGGYHSLALDRTGNVWSWGDNSQRQLGVG----SNASSLIPVPVSG 332

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
            +  + ++ G  HS  + +DG V  WG+N  GQLG G S  R+ P+L
Sbjct: 333 IEHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGTSSTRDTPTL 379



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 129/277 (46%), Gaps = 33/277 (11%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA---SGKDRP 272
           K+ AG  HT  L   G+V+ WGYG  GQLG G+      TP +   L H     +G    
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSART-TPVMAKGLNHVIDVHTGVRST 95

Query: 273 LLVR-QGSV-----NSSGK---------------AGRSYVKEIACG-GRHSAVVTDAGAL 310
           + +R  G+V     N +G+               +G S +K ++ G G HS  +++ G++
Sbjct: 96  MALRSDGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSGIKAVSGGLGYHSMALSEDGSV 155

Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            T+G    G+ G+G+T  Q  P   + L D  V  IAAG + ++ +  +G V+ +G N  
Sbjct: 156 WTWGKNDNGELGNGTTLQQNTPVQVAGLND--VTAIAAGGYFSLALKSDGTVWAWGVNGD 213

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           G+LG G      VP      +        ++ G  HS  +T+DG V +WG N YG LG G
Sbjct: 214 GELGDGTTTDRYVP----VQVAGLTDVMAIAAGGSHSLAVTQDGTVWAWGKNTYGTLGDG 269

Query: 431 DSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
              +R  P  +     +   +A G +H+L L  T  +
Sbjct: 270 TRTNRTRPVQIKNLQHIVA-VAGGGYHSLALDRTGNV 305



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 117/274 (42%), Gaps = 35/274 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS-----G 268
           +  V  G R T+ L   G VW WG    GQLG+G+   M   P  +  L    +     G
Sbjct: 85  VIDVHTGVRSTMALRSDGTVWTWGSNENGQLGIGTVTDM-NVPGQVSGLSGIKAVSGGLG 143

Query: 269 KDRPLLVRQGSV-----NSSGK---------------AGRSYVKEIACGGRHSAVVTDAG 308
                L   GSV     N +G+               AG + V  IA GG  S  +   G
Sbjct: 144 YHSMALSEDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTAIAAGGYFSLALKSDG 203

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            +  +G    G+ G G+T D+  P   + L D+    IAAG  H++ ++ +G V+ +G N
Sbjct: 204 TVWAWGVNGDGELGDGTTTDRYVPVQVAGLTDVMA--IAAGGSHSLAVTQDGTVWAWGKN 261

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            +G LG G       P      I   +    V+ G  HS  L   G V SWG N   QLG
Sbjct: 262 TYGTLGDGTRTNRTRP----VQIKNLQHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLG 317

Query: 429 LGDSIDRNIPSLVPIHGF-LPRNIACGWWHTLLL 461
           +G +    IP  VP+ G    R IA G +H++ +
Sbjct: 318 VGSNASSLIP--VPVSGIEHVREIAAGGFHSVAM 349



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 124/308 (40%), Gaps = 56/308 (18%)

Query: 42  IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
           +P ++ G    K V GG    ++A SE G + TWG  +D G+  L +G   +   P  + 
Sbjct: 125 VPGQVSGLSGIKAVSGGLGYHSMALSEDGSVWTWGK-NDNGE--LGNGTTLQQNTPVQVA 181

Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
               V   AAG    +++   G V+ WG         V  D G  G    D T     +P
Sbjct: 182 GLNDVTAIAAGGYFSLALKSDGTVWAWG---------VNGD-GELG----DGTTTDRYVP 227

Query: 162 TEQAPPSDKRA------GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
            + A  +D  A          V +  T  A  ++     GD   T     V +     I 
Sbjct: 228 VQVAGLTDVMAIAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRTNRTRPVQIKNLQHIV 287

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRPLL 274
            VA GG H+L L   G VW WG   + QLG+GS    ++P P  +  +EH          
Sbjct: 288 AVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNASSLIPVP--VSGIEH---------- 335

Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRP 332
                           V+EIA GG HS  +   G +  +GWG    GQ G G+++ +  P
Sbjct: 336 ----------------VREIAAGGFHSVAMKKDGTV--WGWGFNGGGQLGDGTSSTRDTP 377

Query: 333 SYASSLMD 340
           +   +++D
Sbjct: 378 TLTKAVLD 385


>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
 gi|194695574|gb|ACF81871.1| unknown [Zea mays]
 gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 418

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 135/286 (47%), Gaps = 46/286 (16%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP-----CLEHAASGKDR 271
           +A GG HTL L+  G+V+  G    GQLG+G+ +  +  P  I       +E +A     
Sbjct: 69  LACGGAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHS 128

Query: 272 PLLVRQGSV-----NSSGKAGRS-------------------YVKEIACGGRHSAVVTDA 307
             +   G +     NS G+ G                      VK +A G  HS  VT+ 
Sbjct: 129 CAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEE 188

Query: 308 GALLTFGWGLYGQCGHGS---------TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
           G +L++G    G+ GHG          T+ +  P    +   I++++IAAG+ H+ CI  
Sbjct: 189 GEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDE 248

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           +G +++FG  Q  + G G    E  P ++E    E   ++ V+CG  H+ V+T+ G + S
Sbjct: 249 KGTLFIFG--QKTEKGFGRPNEEFRPNIVE----EIPFSEEVACGGYHTCVVTDSGDLYS 302

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGF-LP-RNIACGWWHTLLLA 462
           WG N+ G LGLG +     P ++    F LP   ++CGW HT +++
Sbjct: 303 WGSNENGCLGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVVS 348



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 59/306 (19%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCL--------- 262
           ++ +V+AG  H+  ++  G+++ WG    GQLGLG    K+V TP  + CL         
Sbjct: 117 RVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVA 176

Query: 263 ---EHA-------------ASGKDRPLLVRQGSVNSSGKAGRSY------------VKEI 294
              EH+             A+G  R    RQ S+         Y            +K+I
Sbjct: 177 LGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKI 236

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           A G  HSA + + G L  FG     + G G  N++ RP+    +     E++A G +HT 
Sbjct: 237 AAGMLHSACIDEKGTLFIFGQKT--EKGFGRPNEEFRPNIVEEIP--FSEEVACGGYHTC 292

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
            ++  G +Y +G N+ G LG G       P++L++ + +   +K VSCG +H+AV++ D 
Sbjct: 293 VVTDSGDLYSWGSNENGCLGLGGTDMVRSPEILKSSLFKLPVSK-VSCGWKHTAVVSGD- 350

Query: 415 QVLSWGW------------NKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLL 460
            + +WGW            +  GQLG G+ +D   P +VP  G   R  +++CG+ HT  
Sbjct: 351 DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVPF-GTNARAVHVSCGFNHTGA 409

Query: 461 LAETTQ 466
           + E ++
Sbjct: 410 IYECSE 415



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 108/238 (45%), Gaps = 32/238 (13%)

Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
           WG G  G+LGLGS ++   +P + P     A   D P                     +A
Sbjct: 33  WGNGDYGRLGLGS-LESRWSPTVCPFF--LARAADPP-------------------ASLA 70

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CGG H+  +T  G +   G   +GQ G G++   +      S    +V +++AG  H+  
Sbjct: 71  CGGAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCA 130

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           ++ +G+++V+G N  GQLG G    + V    +   L   R K V+ G+ HS  +TE+G+
Sbjct: 131 VTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGE 190

Query: 416 VLSWGWNKYGQLG-------LGDSIDRN--IPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           VLSWG    G+LG       LG S+      P L+    G   + IA G  H+  + E
Sbjct: 191 VLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDE 248



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 123/321 (38%), Gaps = 69/321 (21%)

Query: 65  ATSESGKLITWGSADDEGQSYLT--SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           A +  GKL  WG  +  GQ  L   +GK   TP      T+  V   A G  H ++VTE 
Sbjct: 130 AVTADGKLFVWGR-NSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEE 188

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           GEV +WG              G  G  ++ S    S   TE  P   K    + +K +K 
Sbjct: 189 GEVLSWG----------AAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNF--DGIKIKKI 236

Query: 183 SSAREESENPASGDEFFT---------------LSPCLVTLNPGVKITKVAAGGRHTLIL 227
           ++    S         F                  P +V   P  +  +VA GG HT ++
Sbjct: 237 AAGMLHSACIDEKGTLFIFGQKTEKGFGRPNEEFRPNIVEEIPFSE--EVACGGYHTCVV 294

Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
           +D G ++ WG    G LGLG    MV +P ++      +S    P               
Sbjct: 295 TDSGDLYSWGSNENGCLGLGG-TDMVRSPEILK-----SSLFKLP--------------- 333

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWG-----LY-------GQCGHGSTNDQLRPSYA 335
              V +++CG +H+AVV+    + T+GWG      +       GQ GHG+  D   P   
Sbjct: 334 ---VSKVSCGWKHTAVVS-GDDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMV 389

Query: 336 SSLMDIQVEQIAAGLWHTVCI 356
               + +   ++ G  HT  I
Sbjct: 390 PFGTNARAVHVSCGFNHTGAI 410


>gi|114554345|ref|XP_513117.2| PREDICTED: protein RCC2 [Pan troglodytes]
          Length = 488

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 51/261 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L H    
Sbjct: 113 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 169

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 170 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 207

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 208 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 266

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CGA H+ VL    +V SWG+  YG
Sbjct: 267 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 326

Query: 426 QLGLGDSIDRNIPSLVPIHGF 446
           +LG  +  D  +P LV +  F
Sbjct: 327 RLGHAEQKDEMVPRLVKLFDF 347



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+       I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 142 RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 201

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   VP+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 202 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 236

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 237 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 296

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 297 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 356

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 357 AGYTCSFAVSEVGGLFFWG 375



 Score = 45.1 bits (105), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
           SC A HS ++T +G++ SWG N+ GQLG GD+     P L+  +   +  + ACG  HTL
Sbjct: 123 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 181

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 182 ALTETGSV 189


>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1005

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 125/274 (45%), Gaps = 41/274 (14%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           SG +F T     V L   + I  VA G  HT +++  GQ++ +G    G LG GS ++ V
Sbjct: 377 SGSQFLTRKISDV-LGGSLSIFSVACGAWHTAMVTSSGQLFTYGSRTFGVLGHGS-LESV 434

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------ 307
             P  +  L                         R  V  ++CG  H+A + +       
Sbjct: 435 TKPKEVESLR------------------------RMKVISVSCGPWHTAAIVETAIDRKF 470

Query: 308 ------GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
                 G L T+G G  G+ GH     +L P+  + L+D    +++ G   TV +SV G 
Sbjct: 471 YNAKSCGKLFTWGDGDKGRLGHADNKRKLVPTCVTELIDHDFIKVSCGWTLTVALSVSGT 530

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           VY  G +  GQLG    + +++  +L    L  +  K ++ G+ H AVLT  G V +WG 
Sbjct: 531 VYTMGSSIHGQLGCPRAKDKSINVVLGN--LTRQFVKDIASGSHHVAVLTSFGNVYTWGK 588

Query: 422 NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
              GQLGLGD  DRN P LV P+   L  +IACG
Sbjct: 589 GTNGQLGLGDVRDRNSPVLVEPLGDRLVESIACG 622



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 8/177 (4%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ I+ G +H+A+VT  G +  +G G  G+ G     D   P    SL D+ V  +A   
Sbjct: 293 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSD 352

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQA--ENVPKLLETPILESKRAKVVSCGARHSA 408
             T  ++  G +Y++G +     G  ++Q+  + + + +   +  S     V+CGA H+A
Sbjct: 353 HQTCAVTESGELYLWGID-----GGTIEQSGSQFLTRKISDVLGGSLSIFSVACGAWHTA 407

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           ++T  GQ+ ++G   +G LG G       P  V  +      +++CG WHT  + ET
Sbjct: 408 MVTSSGQLFTYGSRTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVET 464



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 118/320 (36%), Gaps = 63/320 (19%)

Query: 65  ATSESGKLITWG----SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
           A +ESG+L  WG    + +  G  +LT            L    S+   A G  H   VT
Sbjct: 357 AVTESGELYLWGIDGGTIEQSGSQFLTRKISD------VLGGSLSIFSVACGAWHTAMVT 410

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP--------PSDKRA 172
            +G+++T+G          +R FG  G    +S  K   + + +          P    A
Sbjct: 411 SSGQLFTYG----------SRTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAA 460

Query: 173 GEEVVKRRKTSSARE----------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
             E    RK  +A+           +       D    L P  VT        KV+ G  
Sbjct: 461 IVETAIDRKFYNAKSCGKLFTWGDGDKGRLGHADNKRKLVPTCVTELIDHDFIKVSCGWT 520

Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            T+ LS  G V+  G    GQLG                       KD+ + V  G++  
Sbjct: 521 LTVALSVSGTVYTMGSSIHGQLG-------------------CPRAKDKSINVVLGNLT- 560

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                R +VK+IA G  H AV+T  G + T+G G  GQ G G   D+  P     L D  
Sbjct: 561 -----RQFVKDIASGSHHVAVLTSFGNVYTWGKGTNGQLGLGDVRDRNSPVLVEPLGDRL 615

Query: 343 VEQIAAGLWHTVCISVEGRV 362
           VE IA GL  T  I +   +
Sbjct: 616 VESIACGLNLTAAICLHKEI 635



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 12/151 (7%)

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           G  + ND L P    S     V+ I+ G  H   ++ +G V+ +G    G+LG  V+   
Sbjct: 272 GSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDI 331

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN-----KYGQLGLGDSIDRN 436
           + PK +E+  LE    + V+C    +  +TE G++  WG +     + G   L   I   
Sbjct: 332 DHPKRVES--LEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDV 389

Query: 437 IPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           +   + I      ++ACG WHT ++  + Q+
Sbjct: 390 LGGSLSIF-----SVACGAWHTAMVTSSGQL 415


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 120/259 (46%), Gaps = 46/259 (17%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           GV+++ VA G  HT++++  GQ++ +G G  G LG G R K    P  +  L+   + + 
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDR-KSASMPREVESLKGLKTLR- 286

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD------------AGALLTFGWGLY 318
                                   ACG  H+A V +            +G L T+G G  
Sbjct: 287 -----------------------AACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDK 323

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG--TG 376
            + GHG    +L P+  ++L+D    Q+A G   TV ++  G +Y  G   +GQLG    
Sbjct: 324 NRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQA 383

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
             +   V +L  T I E      VSCGA H A LT  G V +WG    G+LG GD+ DR+
Sbjct: 384 TGRLPGVLRLGRTLIEE------VSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRD 437

Query: 437 IPSLV-PIHGFLPRNIACG 454
           +PSLV  +     + ++CG
Sbjct: 438 VPSLVEALRDKQVKKVSCG 456



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 49/272 (18%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + + ++A G RH  +++  G+V+ WG    G+LG G     V  P LI  L         
Sbjct: 123 LDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDAD-VAHPQLIDSL--------- 172

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
                            S V+ +ACG  HS  VT +G L T+G G   +G  GHG+    
Sbjct: 173 ---------------ASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISH 217

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P      ++ ++V  +A G WHTV ++  G+++ FG   FG LG G  ++ ++P+ +E
Sbjct: 218 WTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVE 277

Query: 389 TPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLGDSIDRN 436
           +  L+  +    +CG  H+A + E             G++ +WG     +LG GD   + 
Sbjct: 278 S--LKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKL 335

Query: 437 IPSLVPI---HGFLPRNIACGWWHTLLLAETT 465
           +P+ V     H F  R +ACG  H+L +A TT
Sbjct: 336 VPTCVAALVDHNF--RQVACG--HSLTVALTT 363



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D   P    SL+ + V+QIA G+ H   ++ +G V+ +G    G+LG GVD     P+L+
Sbjct: 110 DAFLPRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLI 169

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV--PI 443
           ++  L S   + V+CG  HS  +T+ G + +WG   + +G LG G++I    P  V  P+
Sbjct: 170 DS--LASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPL 227

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G    ++ACG WHT+L+  T Q+
Sbjct: 228 EGVRVSSVACGPWHTVLVTSTGQL 251



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 152/361 (42%), Gaps = 69/361 (19%)

Query: 54  DVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKA 109
           DV    CG   A   +  G++ +WG   +E    L  G   +   P  + + AS  V   
Sbjct: 124 DVQQIACGVRHAALVTRQGEVFSWG---EESGGRLGHGVDADVAHPQLIDSLASSTVQYV 180

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS--TGKQSALPTEQAPP 167
           A G  H  +VT++G++YTWG          T +FG  G     S  T K+   P E    
Sbjct: 181 ACGEYHSCAVTQSGDLYTWG--------DGTHNFGLLGHGNNISHWTPKRVGGPLEGVRV 232

Query: 168 SDKRAG--EEVVKRRKTSSAREESENPAS------GDEFFTLSPCLVTLNPGVKITKVAA 219
           S    G    V+    TS+ +  S    +      GD      P  V    G+K  + A 
Sbjct: 233 SSVACGPWHTVLV---TSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAAC 289

Query: 220 GGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEH-- 264
           G  HT  + ++            G+++ WG G + +LG G +  K+VPT  +   ++H  
Sbjct: 290 GPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTC-VAALVDHNF 348

Query: 265 --AASGKDRPL-------LVRQGSVN--------SSGKA------GRSYVKEIACGGRHS 301
              A G    +       L   GSV+        ++G+       GR+ ++E++CG  H 
Sbjct: 349 RQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRLPGVLRLGRTLIEEVSCGAYHV 408

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT--VCISVE 359
           A +T  G + T+G G  G+ GHG   D+  PS   +L D QV++++ G   T  +C+   
Sbjct: 409 AALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAICLHKS 468

Query: 360 G 360
           G
Sbjct: 469 G 469


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ I+CGGRH+ +VT  G + ++G    G+ GHG   D  +P    +L ++ +E +A G 
Sbjct: 357 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGE 416

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G   +  G LG G + +  VPK +  P LE      +SCG  H+A
Sbjct: 417 YHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGP-LEGIHVSAISCGPWHTA 475

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           ++T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + E
Sbjct: 476 IVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVE 531



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 120/257 (46%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT I++  GQ++ +G G  G LG G R + +  P  +  L+       
Sbjct: 461 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR-QSLSVPREVESLK------- 512

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G + T+G G  
Sbjct: 513 ----------------GLRTVRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 555

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG  + +L P+  ++L++    QIA G   TV ++  G VY  G   +GQLG    
Sbjct: 556 GRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN--P 613

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           QA+ +  +     L     + +SCGA H AVLT   +V +WG    G+LG GD+ DR+ P
Sbjct: 614 QADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSP 673

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     R + CG
Sbjct: 674 TLVESLKDKQVRTVVCG 690



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 6/148 (4%)

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G   D L P      + + V+ I+ G  H   ++ +G +Y +G    G+LG GVD     
Sbjct: 338 GVKMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQ 397

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV 441
           PKL++   L +   ++V+CG  H+  +T  G + +WG   +  G LG G+ +   +P  V
Sbjct: 398 PKLIDA--LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 455

Query: 442 --PIHGFLPRNIACGWWHTLLLAETTQI 467
             P+ G     I+CG WHT ++    Q+
Sbjct: 456 NGPLEGIHVSAISCGPWHTAIVTSAGQL 483



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 25/165 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         ++A G   T+ L+  G V+  G    GQLG      M+P
Sbjct: 561 GDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLP 620

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                    V   GK  +++V+EI+CG  H AV+T    + T+G
Sbjct: 621 -------------------------VRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWG 655

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            G  G+ GHG T+D+  P+   SL D QV  +  G+  T  I + 
Sbjct: 656 KGANGRLGHGDTDDRSSPTLVESLKDKQVRTVVCGINFTAAICIH 700



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 29/181 (16%)

Query: 231 GQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
           G+++ WG G +G+LG G +  ++VPT     C+           LV              
Sbjct: 545 GKIFTWGDGDKGRLGHGDKDTRLVPT-----CVA---------ALVEPNFC--------- 581

Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
              +IACG   +  +T +G + T G  +YGQ G+   +  L       L    VE+I+ G
Sbjct: 582 ---QIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCG 638

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
            +H   ++    VY +G    G+LG G     + P L+E+  L+ K+ + V CG   +A 
Sbjct: 639 AYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVES--LKDKQVRTVVCGINFTAA 696

Query: 410 L 410
           +
Sbjct: 697 I 697


>gi|307204787|gb|EFN83345.1| X-linked retinitis pigmentosa GTPase regulator-like protein
           [Harpegnathos saltator]
          Length = 1665

 Score =  103 bits (258), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 29/188 (15%)

Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
           ++ WG    GQLGLG ++    +P L+  L                         +  + 
Sbjct: 661 IYVWGASQFGQLGLG-KVLQCSSPELVTSL------------------------AQEIIV 695

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           +   G  HS  +T  G + T+GWG++GQ GHG+T+++  P+  +SL+ + V  I+AG  H
Sbjct: 696 DAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDEKSIPTLVTSLLGVVVCHISAGYAH 755

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           T+ +SV+G VY FG N  GQLG G +   ++P  +  P    +  K++S G  H+ V++ 
Sbjct: 756 TLALSVDGFVYAFGCNVLGQLGVGSNNKSSIPMKVSLP----EGIKLISTGYFHNLVVSN 811

Query: 413 DGQVLSWG 420
             ++ +WG
Sbjct: 812 TNKLYTWG 819



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
           C+     +YV+G +QFGQLG G     + P+L+ T + +      V+ G  HS  LT DG
Sbjct: 654 CLVTNNGIYVWGASQFGQLGLGKVLQCSSPELV-TSLAQEIIVDAVA-GQYHSVALTADG 711

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
           +V +WGW  +GQLG G++ +++IP+LV  + G +  +I+ G+ HTL L+
Sbjct: 712 RVFTWGWGVHGQLGHGNTDEKSIPTLVTSLLGVVVCHISAGYAHTLALS 760



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 25/195 (12%)

Query: 292 KEIACGGRHSAVVTDA----------GALLT----FGWGL--YGQCGHGSTNDQLRPSYA 335
           K ++ G  H A++ +A          G L+T    + WG   +GQ G G       P   
Sbjct: 627 KILSTGFSHVALIRNANVYTWGSSVQGCLVTNNGIYVWGASQFGQLGLGKVLQCSSPELV 686

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           +SL    +    AG +H+V ++ +GRV+ +G    GQLG G    +++P L+ +  L   
Sbjct: 687 TSLAQEIIVDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDEKSIPTLVTS--LLGV 744

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IA 452
               +S G  H+  L+ DG V ++G N  GQLG+G     N  S +P+   LP     I+
Sbjct: 745 VVCHISAGYAHTLALSVDGFVYAFGCNVLGQLGVGS----NNKSSIPMKVSLPEGIKLIS 800

Query: 453 CGWWHTLLLAETTQI 467
            G++H L+++ T ++
Sbjct: 801 TGYFHNLVVSNTNKL 815



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 99/416 (23%), Positives = 155/416 (37%), Gaps = 126/416 (30%)

Query: 62  FALATSESGKLIT------WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
           +   +S  G L+T      WG A   GQ  L       +PE      +  +V A AG  H
Sbjct: 645 YTWGSSVQGCLVTNNGIYVWG-ASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYH 703

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
            V++T  G V+TWGW             G  G     +T ++S                 
Sbjct: 704 SVALTADGRVFTWGW-------------GVHGQLGHGNTDEKSI---------------- 734

Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
                                      P LVT   GV +  ++AG  HTL LS  G V+ 
Sbjct: 735 ---------------------------PTLVTSLLGVVVCHISAGYAHTLALSVDGFVYA 767

Query: 236 WGYGGEGQLGLGSRIKM-VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
           +G    GQLG+GS  K  +P    +P                +G            +K I
Sbjct: 768 FGCNVLGQLGVGSNNKSSIPMKVSLP----------------EG------------IKLI 799

Query: 295 ACGGRHSAVVTDAGALLTFGWG-----LYGQCGHGS--------------TNDQLRPSYA 335
           + G  H+ VV++   L T+G       L  Q    S              T++ L     
Sbjct: 800 STGYFHNLVVSNTNKLYTWGASPQALRLQAQAQKKSRILEQQDASEKRNRTSEDLEKMPN 859

Query: 336 SSL---------MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV---DQAENV 383
           SSL         ++  ++  +A    T  I ++ ++     +    L TG    DQ    
Sbjct: 860 SSLNLDEEMKEFLENNIQTKSAQTETTSNIEIQKKLS--ENSNLKNLNTGFIEEDQTHLK 917

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           P +++T +++ +  ++ S G  H+A++T+DG + +WG N  GQ+G G   D  IP+
Sbjct: 918 PSVVDTSLVKGQITQI-SAGCHHNALITKDGSLYTWGRNFDGQIGNGTRRDVPIPT 972



 Score = 50.8 bits (120), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 32/231 (13%)

Query: 55  VCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
           VC    G+A  LA S  G +  +G  +  GQ  + S      P    LP    ++  + G
Sbjct: 746 VCHISAGYAHTLALSVDGFVYAFG-CNVLGQLGVGSNNKSSIPMKVSLPEGIKLI--STG 802

Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ--SALPTEQAPPS-- 168
           + H + V+   ++YTWG        +      S    Q+D++ K+  ++   E+ P S  
Sbjct: 803 YFHNLVVSNTNKLYTWGASPQALRLQAQAQKKSRILEQQDASEKRNRTSEDLEKMPNSSL 862

Query: 169 --DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV-------------- 212
             D+   E +    +T SA+ E+ +     +  + +  L  LN G               
Sbjct: 863 NLDEEMKEFLENNIQTKSAQTETTSNIEIQKKLSENSNLKNLNTGFIEEDQTHLKPSVVD 922

Query: 213 ------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
                 +IT+++AG  H  +++  G ++ WG   +GQ+G G+R  + +PTP
Sbjct: 923 TSLVKGQITQISAGCHHNALITKDGSLYTWGRNFDGQIGNGTRRDVPIPTP 973



 Score = 41.2 bits (95), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 329 QLRPSYA-SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
            L+PS   +SL+  Q+ QI+AG  H   I+ +G +Y +G N  GQ+G G  +   +P   
Sbjct: 915 HLKPSVVDTSLVKGQITQISAGCHHNALITKDGSLYTWGRNFDGQIGNGTRRDVPIP--- 971

Query: 388 ETPILESKRAKVVSCGARHS 407
            TP+  +          RH+
Sbjct: 972 -TPLYYNSACIFAQIPPRHN 990


>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
          Length = 1009

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 29/201 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI------PCLEHAAS 267
           I ++  G  H+L LS  G+++ WG   +GQLG+G       TP ++      P ++ +A 
Sbjct: 124 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 183

Query: 268 GKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVVT 305
                 L   G+V S G+        G +Y K+               +ACGG H+A++T
Sbjct: 184 EAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLT 243

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYV 364
            +G + TFG G YGQ GH ST ++LRP   + L+  +V QIA G  HT+  +S  G+V+ 
Sbjct: 244 KSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFS 303

Query: 365 FGGNQFGQLGTGVDQAENVPK 385
           FG  + GQLG G  + + +P+
Sbjct: 304 FGSGKEGQLGNGGTRNQLIPR 324



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 41/265 (15%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  + L   +KI  +  G  H L+LS  G+ + + Y                       +
Sbjct: 73  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS----------------------I 110

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           EHA   + + +L  +  +            +I CG  HS  ++  G L  +G  L GQ G
Sbjct: 111 EHA---RFQCILQEKNII------------QITCGDYHSLALSKGGELFAWGQNLDGQLG 155

Query: 323 HGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G        P    +L  + + QI+AG  H++ +S+ G VY +G N  GQLG G    +
Sbjct: 156 VGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNK 215

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           + P  +ET  L+ ++ + ++CG  H+A+LT+ G V ++G  KYGQLG   + +   P LV
Sbjct: 216 DSPSCIET--LDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLV 273

Query: 442 P-IHGFLPRNIACGWWHTLLLAETT 465
             + G     IACG  HTL     T
Sbjct: 274 TGLVGNRVTQIACGRQHTLAYVSDT 298



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 31/232 (13%)

Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
           E ++++   G  H +++++ GE++ WG +       V R F S  +   +     S +P 
Sbjct: 121 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 177

Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP-CLVTLNPGVKITKVAAGG 221
            Q    +  +    +     S  R +      G  +   SP C+ TL+   K+  +A GG
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQ-KVEFLACGG 236

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
            HT +L+  G V+ +G G  GQLG                  ++   + RP LV      
Sbjct: 237 CHTALLTKSGLVFTFGDGKYGQLG-----------------HNSTQNELRPRLV------ 273

Query: 282 SSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
            +G  G   V +IACG +H+ A V+D G + +FG G  GQ G+G T +QL P
Sbjct: 274 -TGLVGNR-VTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 323



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 30/219 (13%)

Query: 53  KDVCGGGCG--FALATSESGKLITWGSADD----EGQSYLTSGKHGETPEPFPLPTEASV 106
           K++    CG   +LA S+ G+L  WG   D     G+ + ++     TPE     +   +
Sbjct: 122 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPL 177

Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
           V+ +AG AH ++++ +G VY+WG  +C          G   ++ KDS      L  ++  
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKDSPSCIETLDDQKVE 230

Query: 167 -------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
                   +       +V         +   N    +    L P LVT   G ++T++A 
Sbjct: 231 FLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNE----LRPRLVTGLVGNRVTQIAC 286

Query: 220 GGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
           G +HTL  +SD G+V+ +G G EGQLG  G+R +++P P
Sbjct: 287 GRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRP 325


>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 137/298 (45%), Gaps = 48/298 (16%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVP 254
           P  V      K+   + G  HTL+ ++ G+++  G   EGQLGLG          I    
Sbjct: 80  PTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFN 139

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSY---------------VKEI 294
           T + I  L  +A       L   G +     NS G+ G                  +  I
Sbjct: 140 TQYKIKQL--SAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWI 197

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR----PSYASSLMDIQVEQIAAGL 350
           +CG  HSA VT  G L TFG    G+ G  S  D+L+    P   S L   +V+ ++ G 
Sbjct: 198 SCGYYHSAFVTQDGELYTFGEPENGKLGLPS--DKLKKHKKPQRVSGLSG-KVKIVSCGG 254

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
            HT+ ++ E  VY FG  QFGQLG G    E  +PK ++  +L  K    V+CG  H+AV
Sbjct: 255 EHTIAVT-EKEVYTFGLGQFGQLGHGTFIFETQLPKAVD--VLTKKTILYVTCGENHTAV 311

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-----HGFLPRNIACGWWHTLLLA 462
           +T+ G + ++G  ++G+LGLG+    N    VPI       F  +++ACG  H L+ A
Sbjct: 312 ITDKGLLYTFGDGRHGKLGLGEENFTN--QFVPILCSNFLKFTVQSVACGGCHMLVFA 367



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 4/171 (2%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           I+CG  H+ +VT  G L  FG   +GQ G  + +   +P+   +L   +V   + G  HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHT 101

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK-RAKVVSCGARHSAVLTE 412
           +  + +G++Y  GGN  GQLG G           E     ++ + K +S G+  SA LT 
Sbjct: 102 LLYTEQGKLYSSGGNSEGQLGLG--DTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTV 159

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           DG++  WG N  GQLGL      + P  + I G     I+CG++H+  + +
Sbjct: 160 DGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI-GKPISWISCGYYHSAFVTQ 209



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 38/253 (15%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           ++ G  HT++++  G+++ +G    GQLGL                  A S   +P  V 
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGL-----------------EAGSAISKPTCV- 83

Query: 277 QGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                   KA +S  V   +CG  H+ + T+ G L + G    GQ G G T+   R S+ 
Sbjct: 84  --------KALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSG--RTSFQ 133

Query: 336 S-SLMDIQ--VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
             S  + Q  ++Q++AG   +  ++V+G+++++G N  GQLG   +   + P+ ++    
Sbjct: 134 EISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI--- 190

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRN-IPSLVPIHGFLPRN 450
             K    +SCG  HSA +T+DG++ ++G  + G+LGL  D + ++  P  V       + 
Sbjct: 191 -GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKI 249

Query: 451 IACGWWHTLLLAE 463
           ++CG  HT+ + E
Sbjct: 250 VSCGGEHTIAVTE 262



 Score = 44.7 bits (104), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 17/107 (15%)

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G ++ FG ++F         AEN+P       L++ +   +SCG  H+ ++T +G++  +
Sbjct: 14  GALFTFGKSKF---------AENIPSKF---WLKNDKPAHISCGDEHTVLVTGNGKLYVF 61

Query: 420 GWNKYGQLGL--GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           G N +GQLGL  G +I +  P+ V  +        +CG  HTLL  E
Sbjct: 62  GSNNWGQLGLEAGSAISK--PTCVKALKSEKVVFASCGRNHTLLYTE 106


>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
 gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
          Length = 538

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 104/225 (46%), Gaps = 34/225 (15%)

Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           LSP L+T N  G K+ KVA G  H+L L+  G+V+ WGY   GQ+G G+         + 
Sbjct: 123 LSPQLITTNLIGRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVA 182

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
            CL                        G   V EIACG   S  + D G +  +G+   G
Sbjct: 183 ACL------------------------GTRKVTEIACGQTSSMALLDNGEVYGWGYNGNG 218

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           Q G G+  +Q  P   ++L  + V QI  G  H + ++ EG VY +G N +GQLGTG   
Sbjct: 219 QLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGANSYGQLGTG--- 275

Query: 380 AENVPKLLETPILESKRAKVVSCGARH----SAVLTEDGQVLSWG 420
             N   L+    +   + + V  GA H    S+ +T+ G+V  WG
Sbjct: 276 --NKANLVTPTKIALDKGRFVEIGATHYNHVSSAITQTGKVYMWG 318



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 117/251 (46%), Gaps = 28/251 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD    L P  + +    KI  +  G G H L+ +D G ++ WG+ G  QLG GS  + +
Sbjct: 64  GDAQSGLEPRKIDILCKKKIVDIGYGSGPHVLVCTDNGDLYSWGHNGYSQLGNGSTNQGL 123

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
            +P LI                      ++   GR  VK +ACG  HS  +T  G +  +
Sbjct: 124 -SPQLI----------------------TTNLIGRKVVK-VACGSHHSLALTLEGEVFAW 159

Query: 314 GWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G G+T +Q  P   A+ L   +V +IA G   ++ +   G VY +G N  GQ
Sbjct: 160 GYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALLDNGEVYGWGYNGNGQ 219

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G +   N P       L+      + CG  H+  LT++G V +WG N YGQLG G+ 
Sbjct: 220 LGVGNN--VNQPNPCRVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGANSYGQLGTGNK 277

Query: 433 IDRNIPSLVPI 443
            +   P+ + +
Sbjct: 278 ANLVTPTKIAL 288



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 126/309 (40%), Gaps = 89/309 (28%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
            L  +++G L +WG     G S L +G   +   P  + T      VVK A G  H +++
Sbjct: 94  VLVCTDNGDLYSWGH---NGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLAL 150

Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
           T  GEV+ WG+  C          G  G          S   T QA P            
Sbjct: 151 TLEGEVFAWGYNNC----------GQVG----------SGTTTNQATP------------ 178

Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
           RK ++                   CL T     K+T++A G   ++ L D G+V+GWGY 
Sbjct: 179 RKVAA-------------------CLGTR----KVTEIACGQTSSMALLDNGEVYGWGYN 215

Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
           G GQLG+G+ +   P P  +  L+                           V +I CG  
Sbjct: 216 GNGQLGVGNNVNQ-PNPCRVAALQQMI------------------------VVQIVCGYA 250

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV--CIS 357
           H+  +TD G++  +G   YGQ G G+  + + P+   +L   +  +I A  ++ V   I+
Sbjct: 251 HAMALTDEGSVYAWGANSYGQLGTGNKANLVTPT-KIALDKGRFVEIGATHYNHVSSAIT 309

Query: 358 VEGRVYVFG 366
             G+VY++G
Sbjct: 310 QTGKVYMWG 318


>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
 gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 137/298 (45%), Gaps = 48/298 (16%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVP 254
           P  V      K+   + G  HTL+ ++ G+++  G   EGQLGLG          I    
Sbjct: 80  PTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFN 139

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSY---------------VKEI 294
           T + I  L  +A       L   G +     NS G+ G                  +  I
Sbjct: 140 TQYKIKQL--SAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWI 197

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR----PSYASSLMDIQVEQIAAGL 350
           +CG  HSA VT  G L TFG    G+ G  S  D+L+    P   S L   +V+ ++ G 
Sbjct: 198 SCGYYHSAFVTQDGELYTFGEPENGKLGLPS--DKLKKHKKPQRVSGLSG-KVKIVSCGG 254

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
            HT+ ++ E  VY FG  QFGQLG G    E  +PK ++  +L  K    V+CG  H+AV
Sbjct: 255 EHTIAVT-EKEVYTFGLGQFGQLGHGTFIFETQLPKAVD--VLTKKTILYVTCGENHTAV 311

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-----HGFLPRNIACGWWHTLLLA 462
           +T+ G + ++G  ++G+LGLG+    N    VPI       F  +++ACG  H L+ A
Sbjct: 312 ITDKGLLYTFGDGRHGKLGLGEENFTN--QFVPILCSNFLKFTVQSVACGGCHMLVFA 367



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 4/171 (2%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           I+CG  H+ +VT  G L  FG   +GQ G  + +   +P+   +L   +V   + G  HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHT 101

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK-RAKVVSCGARHSAVLTE 412
           +  + +G++Y  GGN  GQLG G           E     ++ + K +S G+  SA LT 
Sbjct: 102 LLYTEQGKLYSSGGNSEGQLGLG--DTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTV 159

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           DG++  WG N  GQLGL      + P  + I G     I+CG++H+  + +
Sbjct: 160 DGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI-GKPISWISCGYYHSAFVTQ 209



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 38/253 (15%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           ++ G  HT++++  G+++ +G    GQLGL                  A S   +P  V 
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGL-----------------EAGSAISKPTCV- 83

Query: 277 QGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                   KA +S  V   +CG  H+ + T+ G L + G    GQ G G T+   R S+ 
Sbjct: 84  --------KALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSG--RTSFQ 133

Query: 336 S-SLMDIQ--VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
             S  + Q  ++Q++AG   +  ++V+G+++++G N  GQLG   +   + P+ ++    
Sbjct: 134 EISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI--- 190

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRN-IPSLVPIHGFLPRN 450
             K    +SCG  HSA +T+DG++ ++G  + G+LGL  D + ++  P  V       + 
Sbjct: 191 -GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKI 249

Query: 451 IACGWWHTLLLAE 463
           ++CG  HT+ + E
Sbjct: 250 VSCGGEHTIAVTE 262



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 17/107 (15%)

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G ++ FG ++F         AEN+P       L++ R   +SCG  H+ ++T +G++  +
Sbjct: 14  GALFTFGKSKF---------AENIPSKF---WLKNDRPAHISCGDEHTVLVTGNGKLYVF 61

Query: 420 GWNKYGQLGL--GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           G N +GQLGL  G +I +  P+ V  +        +CG  HTLL  E
Sbjct: 62  GSNNWGQLGLEAGSAISK--PTCVKALKSEKVVFASCGRNHTLLYTE 106


>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 557

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           ++P LV+ N    K+T+VA G  H++ L+D G+V+ WGY   GQ+G GS     PTP  +
Sbjct: 131 VAPVLVSANLLNKKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQ-PTPRRV 189

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++  +                          I CG   S  V D G +  +G+   
Sbjct: 190 SSCLQNRVA------------------------VSIVCGQTSSLAVVDNGEVYGWGYNGN 225

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G+  +QL P    +L  + V+QI +G  H++ ++ EG +Y +G N +GQLGTG  
Sbjct: 226 GQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQLGTGNK 285

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             +  P  + T   + +  ++ +C + H SA  T+ GQV  WG
Sbjct: 286 SNQLSPVQIMTE--KERIVEIAACHSTHTSAAKTQSGQVYMWG 326



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 119/247 (48%), Gaps = 28/247 (11%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +GD   ++ P  V +  G K+  ++ G G H L+ ++ G+++ WG+ G  QLG G+  + 
Sbjct: 71  TGDSQSSIVPKKVDILSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQG 130

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
           V                  P+LV    +N         V E+ACG  HS  +TD+G +  
Sbjct: 131 VA-----------------PVLVSANLLNKK-------VTEVACGSHHSMALTDSGEVYA 166

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE-QIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   SS +  +V   I  G   ++ +   G VY +G N  G
Sbjct: 167 WGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNG 226

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G +  +  P  L    L+    + +  G  HS  LT++G + +WG N YGQLG G+
Sbjct: 227 QLGLGNNGNQLTPCRLVA--LQGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQLGTGN 284

Query: 432 SIDRNIP 438
             ++  P
Sbjct: 285 KSNQLSP 291



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 99/180 (55%), Gaps = 3/180 (1%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVE 344
           +GR  V      G H  + T+ G L  +G   Y Q G+G+TN  + P   S+ L++ +V 
Sbjct: 87  SGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVT 146

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           ++A G  H++ ++  G VY +G N  GQ+G+G    +  P+ + +  L+++ A  + CG 
Sbjct: 147 EVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSS-CLQNRVAVSIVCGQ 205

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAE 463
             S  + ++G+V  WG+N  GQLGLG++ ++  P  LV + G   + I  G+ H+L L +
Sbjct: 206 TSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTD 265



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 117/307 (38%), Gaps = 87/307 (28%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE---ASVVKAAAGWAHCVSVT 120
           L  +E G+L  WG     G S L +G   +   P  +        V + A G  H +++T
Sbjct: 103 LLATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALT 159

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
           ++GEVY WG+  C          G  GS    ST  Q         P+ +R    +  R 
Sbjct: 160 DSGEVYAWGYNNC----------GQVGS---GSTANQ---------PTPRRVSSCLQNRV 197

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
             S                                 +  G   +L + D G+V+GWGY G
Sbjct: 198 AVS---------------------------------IVCGQTSSLAVVDNGEVYGWGYNG 224

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
            GQLGLG+         L PC           L+  QG            V++I  G  H
Sbjct: 225 NGQLGLGNN-----GNQLTPC----------RLVALQGLC----------VQQIVSGYAH 259

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE- 359
           S  +TD G L  +G   YGQ G G+ ++QL P    +  +  VE  A    HT     + 
Sbjct: 260 SLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQS 319

Query: 360 GRVYVFG 366
           G+VY++G
Sbjct: 320 GQVYMWG 326



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 3/118 (2%)

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           H +  + +G ++ +G N + QLG G       P L+   +L +K+   V+CG+ HS  LT
Sbjct: 101 HILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLL-NKKVTEVACGSHHSMALT 159

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
           + G+V +WG+N  GQ+G G + ++  P  V   +   +  +I CG   +L + +  ++
Sbjct: 160 DSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEV 217



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 5/117 (4%)

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTE 412
           + I+ +  VY  G N    LGTG  Q+  VPK  +  IL  ++   +S G+  H  + TE
Sbjct: 50  IYITADDEVYALGLNCSNCLGTGDSQSSIVPK--KVDILSGRKVVSLSYGSGPHILLATE 107

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAETTQI 467
           DG++ +WG N Y QLG G +     P LV  +    +   +ACG  H++ L ++ ++
Sbjct: 108 DGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDSGEV 164


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 4/177 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ I+CGGRH+ +VT  G + ++G    G+ GHG   D  +P    +L ++ +E +A G 
Sbjct: 358 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGE 417

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G   +  G LG G + +  VPK +  P LE      +SCG  H+A
Sbjct: 418 YHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGP-LEGIHVSAISCGPWHTA 476

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           ++T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + E 
Sbjct: 477 IVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEV 533



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 120/257 (46%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT I++  GQ++ +G G  G LG G R + +  P  +  L+       
Sbjct: 462 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR-QSLSVPREVESLK------- 513

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G + T+G G  
Sbjct: 514 ----------------GLRTVRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 556

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG  + +L P+  ++L++    QIA G   TV ++  G VY  G   +GQLG    
Sbjct: 557 GRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN--P 614

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           QA+ +  +     L     + +SCGA H AVLT   +V +WG    G+LG GD+ DR+ P
Sbjct: 615 QADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSP 674

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     R + CG
Sbjct: 675 TLVEALKDKQVRTVVCG 691



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 6/148 (4%)

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G   D L P      + + V+ I+ G  H   ++ +G +Y +G    G+LG GVD     
Sbjct: 339 GVNMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQ 398

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV 441
           PKL++   L +   ++V+CG  H+  +T  G + +WG   +  G LG G+ +   +P  V
Sbjct: 399 PKLIDA--LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 456

Query: 442 --PIHGFLPRNIACGWWHTLLLAETTQI 467
             P+ G     I+CG WHT ++    Q+
Sbjct: 457 NGPLEGIHVSAISCGPWHTAIVTSAGQL 484



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 25/165 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         ++A G   T+ L+  G V+  G    GQLG      M+P
Sbjct: 562 GDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLP 621

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                    V   GK  +++V+EI+CG  H AV+T    + T+G
Sbjct: 622 -------------------------VRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWG 656

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            G  G+ GHG T+D+  P+   +L D QV  +  G+  T  I + 
Sbjct: 657 KGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIH 701



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 41/213 (19%)

Query: 211 GVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPH 257
           G++  + A G  HT  + ++            G+++ WG G +G+LG G +  ++VPT  
Sbjct: 514 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT-- 571

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
              C+           LV                 +IACG   +  +T +G + T G  +
Sbjct: 572 ---CVA---------ALVEPNFC------------QIACGHCMTVALTTSGHVYTMGSPV 607

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           YGQ G+   +  L       L    VE+I+ G +H   ++    VY +G    G+LG G 
Sbjct: 608 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 667

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
               + P L+E   L+ K+ + V CG   +A +
Sbjct: 668 TDDRSSPTLVEA--LKDKQVRTVVCGINFTAAI 698


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 4/177 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ I+CGGRH+ +VT  G + ++G    G+ GHG   D  +P    +L ++ +E +A G 
Sbjct: 312 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGE 371

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G   +  G LG G + +  VPK +  P LE      +SCG  H+A
Sbjct: 372 YHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGP-LEGIHVSAISCGPWHTA 430

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           ++T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + E 
Sbjct: 431 IVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEV 487



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 120/257 (46%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT I++  GQ++ +G G  G LG G R + +  P  +  L+       
Sbjct: 416 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR-QSLSVPREVESLK------- 467

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G + T+G G  
Sbjct: 468 ----------------GLRTVRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 510

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG  + +L P+  ++L++    QIA G   TV ++  G VY  G   +GQLG    
Sbjct: 511 GRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN--P 568

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           QA+ +  +     L     + +SCGA H AVLT   +V +WG    G+LG GD+ DR+ P
Sbjct: 569 QADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSP 628

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     R + CG
Sbjct: 629 TLVEALKDKQVRTVVCG 645



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 6/148 (4%)

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G   D L P      + + V+ I+ G  H   ++ +G +Y +G    G+LG GVD     
Sbjct: 293 GVNMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQ 352

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV 441
           PKL++   L +   ++V+CG  H+  +T  G + +WG   +  G LG G+ +   +P  V
Sbjct: 353 PKLIDA--LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 410

Query: 442 --PIHGFLPRNIACGWWHTLLLAETTQI 467
             P+ G     I+CG WHT ++    Q+
Sbjct: 411 NGPLEGIHVSAISCGPWHTAIVTSAGQL 438



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 25/165 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         ++A G   T+ L+  G V+  G    GQLG      M+P
Sbjct: 516 GDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLP 575

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                    V   GK  +++V+EI+CG  H AV+T    + T+G
Sbjct: 576 -------------------------VRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWG 610

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            G  G+ GHG T+D+  P+   +L D QV  +  G+  T  I + 
Sbjct: 611 KGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIH 655



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 41/213 (19%)

Query: 211 GVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPH 257
           G++  + A G  HT  + ++            G+++ WG G +G+LG G +  ++VPT  
Sbjct: 468 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT-- 525

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
              C+           LV                 +IACG   +  +T +G + T G  +
Sbjct: 526 ---CVA---------ALVEPNFC------------QIACGHCMTVALTTSGHVYTMGSPV 561

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           YGQ G+   +  L       L    VE+I+ G +H   ++    VY +G    G+LG G 
Sbjct: 562 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 621

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
               + P L+E   L+ K+ + V CG   +A +
Sbjct: 622 TDDRSSPTLVEA--LKDKQVRTVVCGINFTAAI 652


>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 823

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 129/269 (47%), Gaps = 34/269 (12%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           G   + L+   V  + G+ + +VAAGG H L +LSD   +W WG  G+GQLG+GS     
Sbjct: 72  GTTAYRLASAPVDFSNGMVVKRVAAGGSHALAVLSDK-TLWAWGRNGDGQLGVGSTTSSF 130

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
            +P  +P                       G+ G   V   A     +AV++D G +LT+
Sbjct: 131 -SPVKVP-----------------------GRTGVEVVAMAASTFNSAAVLSD-GKVLTW 165

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G+  YGQ G+GST DQ  P   S+L DI+   ++ G +H + +   G V+ +G N  GQL
Sbjct: 166 GYNAYGQLGNGSTTDQSSPVEVSALSDIK--GVSVGKYHMLALRSGGTVWAWGFNGSGQL 223

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
           G G           +  +L  K    VS G  HS  L  DG V +WG N  GQLG+G   
Sbjct: 224 GLGSGSNTQYNTPQQAAVL--KGVASVSAGDSHSLALRWDGTVWAWGQNNQGQLGIGSFT 281

Query: 434 DRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
           DR  P  VP + G +   +A G +H L L
Sbjct: 282 DRPSPVQVPRLTGVV--EVAAGQFHALAL 308



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 115/259 (44%), Gaps = 35/259 (13%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG-----LGSRIKMVPT 255
           L+P  V+      +  VAAGG H+L L   G++W WG     QLG     LGSR      
Sbjct: 501 LTPVSVSTASLTDVKNVAAGGFHSLALGSDGKLWSWGSNSLSQLGVSRDTLGSRASPALV 560

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE---------------------- 293
             +   +  AA      +++  G V++ G  G   + +                      
Sbjct: 561 SGVSGVVAVAAGETHSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFSI 620

Query: 294 --IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
             +A G  HS  +   G +  +G    GQ G GS  D+ RP   + L   +V  + AGL+
Sbjct: 621 LGVAAGQNHSLALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLN--RVVSVVAGLY 678

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           H++ +  +G V+ +G N  GQLG G    + +P  ++ P L    A  V+ G RHS  L 
Sbjct: 679 HSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLP--VQVPGLSGVVA--VAAGGRHSLALR 734

Query: 412 EDGQVLSWGWNKYGQLGLG 430
            DG V +WG+N  GQ+G G
Sbjct: 735 ADGTVWAWGYNSNGQIGDG 753



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 160/398 (40%), Gaps = 56/398 (14%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G  F L     GKL  WG  +  GQ    S  +  TP      +   V   AAG  H ++
Sbjct: 468 GAKFTLFQKNDGKLWAWGH-NFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGFHSLA 526

Query: 119 VTEAGEVYTWGWRECVPSAKVTRD-FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE-- 175
           +   G++++WG    +    V+RD  GS  S          AL +  +      AGE   
Sbjct: 527 LGSDGKLWSWG-SNSLSQLGVSRDTLGSRAS---------PALVSGVSGVVAVAAGETHS 576

Query: 176 -VVKRRKTSSAREESENPASGD------EFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
            VV      SA   +     GD       F+  SP   T      I  VAAG  H+L L 
Sbjct: 577 LVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPT--NLFSILGVAAGQNHSLALR 634

Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
             G VW WG    GQLG GS +                  + RP+ V          A  
Sbjct: 635 SDGTVWAWGRNNSGQLGDGSLVD-----------------RTRPVQV----------ARL 667

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           + V  +  G  HS  +   G +  +G    GQ G G+   Q+ P     L    V  +AA
Sbjct: 668 NRVVSVVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLPVQVPGLSG--VVAVAA 725

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARH 406
           G  H++ +  +G V+ +G N  GQ+G G D A  + +     +L S +  V  V+ G  H
Sbjct: 726 GGRHSLALRADGTVWAWGYNSNGQIGDGSD-ASIIYRPSPVKVLFSSQDVVMGVAAGDTH 784

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVPI 443
           S  +   G+V +WG N  GQLG   ++ DR+ P  V +
Sbjct: 785 SVAVLSGGRVRTWGQNDSGQLGYATNNTDRSTPGEVTL 822



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 160/423 (37%), Gaps = 68/423 (16%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           ALA    G +  WG     G   L  G       P  +P    VV  AAG  H V+V   
Sbjct: 305 ALALRLDGTVWAWGF---NGSGQLGDGTTLSRSSPVQVPGLTGVVSVAAGDGHSVAVLSD 361

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS----TGKQSALP----TEQAPPSDK-RAG 173
           G VYTWG              G  G   +D+    T  Q+ LP      +  P ++   G
Sbjct: 362 GRVYTWGRNSA----------GQLGDGSQDALPHPTPGQALLPFVCGNHRLEPEEQCDDG 411

Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP----------GVKITKVAAGGRH 223
             +     ++    ES +   GD     +      N            ++  ++ AG + 
Sbjct: 412 NSINGDGCSALCLAESGSSLCGDGIKAAAEACDDGNLVNGDGCSFVCRLETPRLVAGAKF 471

Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
           TL   + G++W WG+   GQLG  S +       L P     AS  D             
Sbjct: 472 TLFQKNDGKLWAWGHNFSGQLGDDSTVN-----RLTPVSVSTASLTD------------- 513

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
                  VK +A GG HS  +   G L ++G     Q G        R S A       V
Sbjct: 514 -------VKNVAAGGFHSLALGSDGKLWSWGSNSLSQLGVSRDTLGSRASPALVSGVSGV 566

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL-ETPILESKRAKV--V 400
             +AAG  H++ +   G+V  +G N +GQ+G   D    VP     +P   +    +  V
Sbjct: 567 VAVAAGETHSLVVLSNGKVSAWGYNGYGQIG---DGCSPVPTFYCSSPTEPTNLFSILGV 623

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHT 458
           + G  HS  L  DG V +WG N  GQLG G  +DR  P  V     L R  ++  G +H+
Sbjct: 624 AAGQNHSLALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQVA---RLNRVVSVVAGLYHS 680

Query: 459 LLL 461
           L L
Sbjct: 681 LAL 683



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 147/373 (39%), Gaps = 41/373 (10%)

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
           +AAAG A+ +   + G V+TWG      S     D  +A           + +  ++   
Sbjct: 41  RAAAGEAYTLIQRDDGSVWTWG----ANSGGQLGDGTTAYRLASAPVDFSNGMVVKRVAA 96

Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
               A   +  +   +  R        G    + SP  V    GV++  +AA   ++  +
Sbjct: 97  GGSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSPVKVPGRTGVEVVAMAASTFNSAAV 156

Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH---AASGKDRPLLVRQGSV---- 280
              G+V  WGY   GQLG GS      +P  +  L      + GK   L +R G      
Sbjct: 157 LSDGKVLTWGYNAYGQLGNGSTTDQ-SSPVEVSALSDIKGVSVGKYHMLALRSGGTVWAW 215

Query: 281 ------------------NSSGKAG-RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                             N+  +A     V  ++ G  HS  +   G +  +G    GQ 
Sbjct: 216 GFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVWAWGQNNQGQL 275

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           G GS  D+  P     L    V ++AAG +H + + ++G V+ +G N  GQLG G   + 
Sbjct: 276 GIGSFTDRPSPVQVPRLTG--VVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSR 333

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           + P  ++ P L    +  V+ G  HS  +  DG+V +WG N  GQ  LGD     +P   
Sbjct: 334 SSP--VQVPGLTGVVS--VAAGDGHSVAVLSDGRVYTWGRNSAGQ--LGDGSQDALPHPT 387

Query: 442 PIHGFLPRNIACG 454
           P    LP    CG
Sbjct: 388 PGQALLP--FVCG 398



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 131/352 (37%), Gaps = 57/352 (16%)

Query: 39  LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
           L+  P     G   K V  GG   ALA      L  WG   D GQ  + S     +P   
Sbjct: 78  LASAPVDFSNGMVVKRVAAGGS-HALAVLSDKTLWAWGRNGD-GQLGVGSTTSSFSPVKV 135

Query: 99  PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
           P  T   VV  AA   +  +V   G+V TWG             + + G     ST  QS
Sbjct: 136 PGRTGVEVVAMAASTFNSAAVLSDGKVLTWG-------------YNAYGQLGNGSTTDQS 182

Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK----- 213
           + P E +  SD +     V +    + R      A G             N         
Sbjct: 183 S-PVEVSALSDIKG--VSVGKYHMLALRSGGTVWAWGFNGSGQLGLGSGSNTQYNTPQQA 239

Query: 214 -----ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
                +  V+AG  H+L L   G VW WG   +GQLG+GS     P+P  +P L      
Sbjct: 240 AVLKGVASVSAGDSHSLALRWDGTVWAWGQNNQGQLGIGSFTDR-PSPVQVPRL------ 292

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                               + V E+A G  H+  +   G +  +G+   GQ G G+T  
Sbjct: 293 --------------------TGVVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLS 332

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
           +  P     L    V  +AAG  H+V +  +GRVY +G N  GQLG G   A
Sbjct: 333 RSSPVQVPGLTG--VVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDA 382



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 3/167 (1%)

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           A G  ++ +  D G++ T+G    GQ G G+T  +L  +       + V+++AAG  H +
Sbjct: 43  AAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPVDFSNGMVVKRVAAGGSHAL 102

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
            +  +  ++ +G N  GQLG G   +   P  ++ P         ++    +SA +  DG
Sbjct: 103 AVLSDKTLWAWGRNGDGQLGVGSTTSSFSP--VKVPGRTGVEVVAMAASTFNSAAVLSDG 160

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
           +VL+WG+N YGQLG G + D++ P  V     + + ++ G +H L L
Sbjct: 161 KVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDI-KGVSVGKYHMLAL 206



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 147/379 (38%), Gaps = 65/379 (17%)

Query: 22  VYMWGY-LPGTSPEKSPI--LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
           ++ WG+   G   + S +  L+P+          K+V  GG   +LA    GKL +WGS 
Sbjct: 481 LWAWGHNFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGF-HSLALGSDGKLWSWGS- 538

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
           +   Q  ++    G    P  +   + VV  AAG  H + V   G+V  WG+        
Sbjct: 539 NSLSQLGVSRDTLGSRASPALVSGVSGVVAVAAGETHSLVVLSNGKVSAWGY-------- 590

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA-----------RE 187
               +G  G           + PTE   P++  +   V   +  S A           R 
Sbjct: 591 --NGYGQIGDGCSPVPTFYCSSPTE---PTNLFSILGVAAGQNHSLALRSDGTVWAWGRN 645

Query: 188 ESENPASGDEFFTLSPCLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
            S     G       P  V  LN   ++  V AG  H+L L   G VW WG  G GQLG 
Sbjct: 646 NSGQLGDGSLVDRTRPVQVARLN---RVVSVVAGLYHSLALRSDGTVWAWGDNGSGQLGD 702

Query: 247 GSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           G+   +M+P    +P                          G S V  +A GGRHS  + 
Sbjct: 703 GTYFGQMLPVQ--VP--------------------------GLSGVVAVAAGGRHSLALR 734

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQ--VEQIAAGLWHTVCISVEGRV 362
             G +  +G+   GQ G GS    + RPS    L   Q  V  +AAG  H+V +   GRV
Sbjct: 735 ADGTVWAWGYNSNGQIGDGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRV 794

Query: 363 YVFGGNQFGQLGTGVDQAE 381
             +G N  GQLG   +  +
Sbjct: 795 RTWGQNDSGQLGYATNNTD 813



 Score = 44.7 bits (104), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK--RAK 398
           ++  + AAG  +T+    +G V+ +G N  GQLG G        +L   P+  S     K
Sbjct: 37  LETPRAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGT----TAYRLASAPVDFSNGMVVK 92

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            V+ G  H+  +  D  + +WG N  GQLG+G +     P  VP
Sbjct: 93  RVAAGGSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSPVKVP 136


>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
 gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
          Length = 819

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 195/449 (43%), Gaps = 53/449 (11%)

Query: 22  VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
           V+ WG  + G     + + S IP+ + G    + +  G    A+  S+ G L TWG  + 
Sbjct: 381 VWTWGKNINGILGLGTALDSQIPSVVSGTGDVEVISCGKTHMAIIKSD-GTLWTWG-YNI 438

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
            GQ  L +G      EP  +   +++ K + G  H +++ E   ++ WG  + +   ++ 
Sbjct: 439 YGQ--LGNGNVDYITEPVTINGISNISKISCGGKHVLAIDENKTLWAWGNNDYL---QLI 493

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-------NPA 193
            D G       +S      +P   A  S+K   + V    +T    E+ E       N  
Sbjct: 494 DDVG----LSAESGSNDYCIPF--AVKSEKDVKDIVAAFNRTLVVYEDEEVWIYAAKNTV 547

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           +GDE     P  +    GV  T V+ G  H L L D G V+  G    GQLG GS+    
Sbjct: 548 AGDEQSVYLPYKIEGLEGV--TDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQT--- 602

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
                     H +  +   L   +G  N         +  +A G  HS  + + G + T+
Sbjct: 603 ---------HHNSYSETFNLTKAKGLTN---------IVAVAAGSEHSVALKNDGTVWTW 644

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G   +G+  HG+    L P  A  L +I    I+AG  + + +  +G V+ +G N +GQL
Sbjct: 645 GSNQFGELAHGNDTFSLEPMQAEGLENICA--ISAGNNYNLALKEDGTVWAWGDNTYGQL 702

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI 433
           G G     NVP  ++   LE+   K+++ G   S  +T+DG V +WG N  GQLG G + 
Sbjct: 703 GNGSTYKTNVP--VQVDGLEN-IVKIIA-GRDSSFAITKDGDVWAWGKNNCGQLGDGTTQ 758

Query: 434 DRNIPSLVPIHGFLP-RNIACGWWHTLLL 461
           +R  P  V I  F   ++I  G   T++L
Sbjct: 759 NRLTP--VKIDAFKGCKSIVSGMDFTMVL 785



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 171/424 (40%), Gaps = 74/424 (17%)

Query: 60  CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAH 115
           CG    +A  + G + TWG  +  GQ  L  G+ GE  E  P   E    V+K AAG  H
Sbjct: 116 CGEYHTIALKKDGTVWTWG-YNSYGQ--LGLGEAGEI-ERIPKKIEGLEDVIKVAAGSRH 171

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS---DKRA 172
            +++ + G V+ WG+            +G  G    D +  +   P +    +   D  A
Sbjct: 172 SLALKKDGTVWAWGYNY----------YGQLG----DESNIRRNTPVQVKGLTGVKDIDA 217

Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV--------KITKVAAGGRHT 224
           G+       + + R++      G  +     C   +N  V         IT+++AG  H 
Sbjct: 218 GDFF-----SVALRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGVSNITQISAGDEHV 272

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
           L L     VWGWG G +GQLG G+    +  P  +                         
Sbjct: 273 LALDKDKNVWGWGAGDKGQLGNGTAASFLRIPEKLSSFTE-------------------- 312

Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                 VK +  G   SA + + G L  +G   YG  G+ S N    P     +  I+  
Sbjct: 313 ------VKSVKAGTMVSAAIKEDGTLWIWGDNTYGIMGN-SRNINSSPVQRKDISGIKAV 365

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           ++    +    +  +G V+ +G N  G LG G      +P ++      +   +V+SCG 
Sbjct: 366 ELNQ--YCAAALKNDGTVWTWGKNINGILGLGTALDSQIPSVVSG----TGDVEVISCGK 419

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTLLLAE 463
            H A++  DG + +WG+N YGQLG G+ +D  I   V I+G      I+CG  H L + E
Sbjct: 420 THMAIIKSDGTLWTWGYNIYGQLGNGN-VDY-ITEPVTINGISNISKISCGGKHVLAIDE 477

Query: 464 TTQI 467
              +
Sbjct: 478 NKTL 481



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 7/147 (4%)

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLW 351
           ++ACG  H+  +   G + T+G+  YGQ G G   +  R P     L D  V ++AAG  
Sbjct: 113 QVACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIEGLED--VIKVAAGSR 170

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           H++ +  +G V+ +G N +GQLG   +   N P      +      K +  G   S  L 
Sbjct: 171 HSLALKKDGTVWAWGYNYYGQLGDESNIRRNTP----VQVKGLTGVKDIDAGDFFSVALR 226

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           +DG V  WG+N  GQ+G G  I+ N+P
Sbjct: 227 DDGTVWGWGYNYKGQIGCGTGINSNVP 253



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 5/99 (5%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCG 403
           Q+A G +HT+ +  +G V+ +G N +GQLG G   + E +PK +E   LE      V+ G
Sbjct: 113 QVACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIEG--LEDVIK--VAAG 168

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
           +RHS  L +DG V +WG+N YGQLG   +I RN P  V 
Sbjct: 169 SRHSLALKKDGTVWAWGYNYYGQLGDESNIRRNTPVQVK 207



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 92/410 (22%), Positives = 156/410 (38%), Gaps = 59/410 (14%)

Query: 18  KETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
           K+  V+ WGY   G   ++S I    P ++ G    KD+  G   F++A  + G +  WG
Sbjct: 177 KDGTVWAWGYNYYGQLGDESNIRRNTPVQVKGLTGVKDIDAGDF-FSVALRDDGTVWGWG 235

Query: 77  SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
             + +GQ  +  G    +  P      +++ + +AG  H +++ +   V+ WG       
Sbjct: 236 -YNYKGQ--IGCGTGINSNVPLQTVGVSNITQISAGDEHVLALDKDKNVWGWG-----AG 287

Query: 137 AKVTRDFGSAGSFQK------DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
            K     G+A SF +        T  +S         + K  G   +    T      S 
Sbjct: 288 DKGQLGNGTAASFLRIPEKLSSFTEVKSVKAGTMVSAAIKEDGTLWIWGDNTYGIMGNSR 347

Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
           N  S       SP       G+K   V         L + G VW WG    G LGLG+ +
Sbjct: 348 NINS-------SPVQRKDISGIK--AVELNQYCAAALKNDGTVWTWGKNINGILGLGTAL 398

Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
                P ++                          +G   V+ I+CG  H A++   G L
Sbjct: 399 DS-QIPSVV--------------------------SGTGDVEVISCGKTHMAIIKSDGTL 431

Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
            T+G+ +YGQ G+G+ +    P   + + +I   +I+ G  H + I     ++ +G N +
Sbjct: 432 WTWGYNIYGQLGNGNVDYITEPVTINGISNIS--KISCGGKHVLAIDENKTLWAWGNNDY 489

Query: 371 GQL----GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
            QL    G   +   N    +   +   K  K +      + V+ ED +V
Sbjct: 490 LQLIDDVGLSAESGSN-DYCIPFAVKSEKDVKDIVAAFNRTLVVYEDEEV 538


>gi|356540207|ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 530

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 39/261 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWG---YGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
           G++I + AAG   T+++SD GQV+ +G   YG +G        K V  P ++  L++   
Sbjct: 196 GIRIIQAAAGAGRTMLVSDSGQVYAFGEAEYGVQGS-------KTVAAPQIVESLKNI-- 246

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
                                 +V + A G   +AV++  G + TF WG   + GH +  
Sbjct: 247 ----------------------FVVQAAIGNFFTAVLSREGRVYTFSWGSDEKLGHHTDQ 284

Query: 328 DQLRPS-YASSLMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGTGVDQAENV 383
             + P     +L +I V QIAAG  + +C++ +     VY  G    G+LG G    E  
Sbjct: 285 SDVEPHPLLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEEY 344

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-P 442
           P+L+E   L + +  VV+ GA H+AV+  DG+V +WGW +YG LG G+    ++P +V  
Sbjct: 345 PRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEA 404

Query: 443 IHGFLPRNIACGWWHTLLLAE 463
           +      ++A G + T ++++
Sbjct: 405 LSNVKAVHVATGDYTTFVVSD 425



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 25/229 (10%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P +V     + + + A G   T +LS  G+V+ + +G + +LG  +    V    L+  
Sbjct: 236 APQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDEKLGHHTDQSDVEPHPLLGA 295

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           LE+       P++           AG  Y+  +AC     +V        + G GL G+ 
Sbjct: 296 LENI------PVV--------QIAAGYCYLLCLACQPSGMSV-------YSVGCGLGGKL 334

Query: 322 GHGSTNDQLRPSYASS--LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           GHGS  D+  P       L+++Q   +AAG WH   +  +GRV  +G  ++G LG G ++
Sbjct: 335 GHGSRTDEEYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEE 394

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            E+VPK++E   L + +A  V+ G   + V+++DG V S+G  +   LG
Sbjct: 395 CESVPKVVEA--LSNVKAVHVATGDYTTFVVSDDGDVYSFGCGQSASLG 441



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 172/416 (41%), Gaps = 72/416 (17%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHC 116
           G G ++A +  G + ++GS +  GQ  L  G   E   P P+ T     +++AAAG    
Sbjct: 153 GPGHSIAVTSKGIVYSFGS-NSSGQ--LGHGTTEEEWRPRPIRTLQGIRIIQAAAGAGRT 209

Query: 117 VSVTEAGEVYTWGWRE-------CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           + V+++G+VY +G  E        V + ++     +    Q       +A+ + +     
Sbjct: 210 MLVSDSGQVYAFGEAEYGVQGSKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYT 269

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL-- 227
              G +      T  +  E              P L  L   + + ++AAG  + L L  
Sbjct: 270 FSWGSDEKLGHHTDQSDVEPH------------PLLGALE-NIPVVQIAAGYCYLLCLAC 316

Query: 228 --SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ-GSVNSSG 284
             S M  V+  G G  G+LG GSR                 + ++ P L+ Q G +N   
Sbjct: 317 QPSGM-SVYSVGCGLGGKLGHGSR-----------------TDEEYPRLIEQFGLLNLQP 358

Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                    +A G  H+AVV   G + T+GWG YG  GHG+   +  P    +L +++  
Sbjct: 359 MV-------VAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAV 411

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV----DQAENVPKLLETPILESKR---- 396
            +A G + T  +S +G VY FG  Q   LG       +Q     K+L+  ++ S +    
Sbjct: 412 HVATGDYTTFVVSDDGDVYSFGCGQSASLGHNAAGNDEQGNRHAKVLDPELVTSLKQINE 471

Query: 397 ----AKVVSCG--ARHSAVLTEDGQVLSWGWNKYGQLGL---GDSIDRNIPSLVPI 443
                 + +C     H+  LTE G++ ++G    GQLG+    +  +R  P  V I
Sbjct: 472 RVVQISLTNCNYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTERGNPERVEI 527



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT  G + +FG    GQ GHG+T ++ RP    +L  I++ Q AAG   T+ +S  
Sbjct: 156 HSIAVTSKGIVYSFGSNSSGQLGHGTTEEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDS 215

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G+VY FG  ++G  G+    A   P+++E+  L++      + G   +AVL+ +G+V ++
Sbjct: 216 GQVYAFGEAEYGVQGSKTVAA---PQIVES--LKNIFVVQAAIGNFFTAVLSREGRVYTF 270

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACGWWHTLLLA 462
            W    +  LG   D++     P+ G L       IA G+ + L LA
Sbjct: 271 SWGSDEK--LGHHTDQSDVEPHPLLGALENIPVVQIAAGYCYLLCLA 315



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ ++ +G VY FG N  GQLG G  + E  P+ + T  L+  R    + GA
Sbjct: 149 QAIAGPGHSIAVTSKGIVYSFGSNSSGQLGHGTTEEEWRPRPIRT--LQGIRIIQAAAGA 206

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLG 428
             + ++++ GQV ++G  +YG  G
Sbjct: 207 GRTMLVSDSGQVYAFGEAEYGVQG 230


>gi|166240420|ref|XP_640165.2| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
 gi|165988589|gb|EAL66176.2| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
          Length = 919

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 128/270 (47%), Gaps = 43/270 (15%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           +I  +A G  H+L + D+GQV+ WG G  G+LGLG+   +VPTP LI  +          
Sbjct: 247 RIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVIN--------- 297

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH----GSTND 328
              R GS N    A       IA G  +S ++   G + +FG  L+ + G+    G+   
Sbjct: 298 ---RFGS-NEIATA-------IAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGF 346

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLL 387
           Q  P    S++  Q++ IA   WH+V + ++GRVY  G +  G+LG  +    +  P+  
Sbjct: 347 QSTPKKIPSIL--QMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPE-- 402

Query: 388 ETPILESKR---------AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL----GDSID 434
              I  SK           K ++CG   + VL+E G + SWG N   QLGL    G S  
Sbjct: 403 RVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEY 462

Query: 435 RNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
            + P LV  ++ +   + A G  H + L++
Sbjct: 463 YSQPKLVTALNPYTIHSFAVGDQHVVALSD 492



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 26/181 (14%)

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G  ++ ++TD GA+ + G   YG+ GH    D L P+    L + +++ IA G  H++ +
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAM 261

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES--------KRAKVVSCGARHSA 408
              G+VY +G    G+LG G D +     ++ TP L S        + A  ++ G  +S 
Sbjct: 262 DDLGQVYSWGNGASGRLGLGNDFS-----IVPTPTLISVINRFGSNEIATAIAAGCDNSM 316

Query: 409 VLTEDGQVLSWGWNKYGQLGLGD--------SIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
           +L  +G V S+G N + +LG  +        S  + IPS++ +     ++IAC  WH++ 
Sbjct: 317 ILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQM-----KSIACASWHSVF 371

Query: 461 L 461
           L
Sbjct: 372 L 372



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 43/205 (20%)

Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGK-- 269
           T +AAG  +++IL   G V+ +G     +LG       +    TP  IP +    S    
Sbjct: 306 TAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSIACA 365

Query: 270 --DRPLLVRQGSV-----NSSGKAGR---SY------------------------VKEIA 295
                 L  +G V     +++G+ GR   SY                        +K+IA
Sbjct: 366 SWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIA 425

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGH----GSTNDQLRPSYASSLMDIQVEQIAAGLW 351
           CG   + V++++G+L ++G     Q G     G +    +P   ++L    +   A G  
Sbjct: 426 CGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQ 485

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTG 376
           H V +S +G V+ +G N   Q G G
Sbjct: 486 HVVALSDQGEVFCYGDNSTLQCGFG 510


>gi|255549098|ref|XP_002515604.1| Williams-Beuren syndrome chromosome region 16 protein, putative
           [Ricinus communis]
 gi|223545242|gb|EEF46749.1| Williams-Beuren syndrome chromosome region 16 protein, putative
           [Ricinus communis]
          Length = 374

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 41/259 (15%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KM 252
           SG+  +T  P  V+     +I +++AG  H+  ++  G+++ WG    GQLGLG +  ++
Sbjct: 91  SGNLSYTTEPVKVS-GLQKEIMQISAGYHHSCAITVDGELYMWGRNSNGQLGLGKKAQRI 149

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
           VP P  +  L                            +K +A G  HS  VTD G  L+
Sbjct: 150 VPLPTKVEYLNGLT------------------------IKLVALGSEHSIAVTDRGEALS 185

Query: 313 FGWGLYGQCGHGSTNDQLR---------PSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           +G G +G+ GH + +   R         P     L +++V+ +AAGL H+ CI V G V+
Sbjct: 186 WGLGGFGRLGHSNQSGTFRFWTSTSEYTPRSIKKLEEVKVKSVAAGLLHSACIDVNGSVF 245

Query: 364 VFGGNQFGQLGTGVDQAENVPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           VFG     + G G      +P ++ + P      A  VSCG  H+ V+T  G++ +WG N
Sbjct: 246 VFGEVSVDRTGFGEAIGAEIPSMVGKLPC-----ANEVSCGGYHTCVVTSGGELYAWGVN 300

Query: 423 KYGQLGLGDSIDRNIPSLV 441
           + G LG+G     + P  V
Sbjct: 301 ENGCLGIGSFNSLHAPERV 319



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 2/139 (1%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG-HGSTNDQLRPSYASSLMDIQVEQIAAG 349
           +K IACGG H+  +T+ G +   G   +GQ G  G+ +    P   S L   ++ QI+AG
Sbjct: 58  LKSIACGGAHTLFLTETGCVYATGLNDFGQLGISGNLSYTTEPVKVSGLQK-EIMQISAG 116

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
             H+  I+V+G +Y++G N  GQLG G      VP   +   L     K+V+ G+ HS  
Sbjct: 117 YHHSCAITVDGELYMWGRNSNGQLGLGKKAQRIVPLPTKVEYLNGLTIKLVALGSEHSIA 176

Query: 410 LTEDGQVLSWGWNKYGQLG 428
           +T+ G+ LSWG   +G+LG
Sbjct: 177 VTDRGEALSWGLGGFGRLG 195



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 7/155 (4%)

Query: 314 GWGLYGQCGHGSTNDQLRPSY--ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           G G +G+ G GS + Q RP    +S   +  ++ IA G  HT+ ++  G VY  G N FG
Sbjct: 27  GNGDFGRLGTGSLDSQWRPKLLLSSCFANHSLKSIACGGAHTLFLTETGCVYATGLNDFG 86

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG   + +     +  + +   K    +S G  HS  +T DG++  WG N  GQLGLG 
Sbjct: 87  QLGISGNLSYTTEPVKVSGL--QKEIMQISAGYHHSCAITVDGELYMWGRNSNGQLGLGK 144

Query: 432 SIDRNIP---SLVPIHGFLPRNIACGWWHTLLLAE 463
              R +P    +  ++G   + +A G  H++ + +
Sbjct: 145 KAQRIVPLPTKVEYLNGLTIKLVALGSEHSIAVTD 179



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 41/71 (57%)

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
           V+G   FG+LGTG   ++  PKLL +    +   K ++CG  H+  LTE G V + G N 
Sbjct: 25  VWGNGDFGRLGTGSLDSQWRPKLLLSSCFANHSLKSIACGGAHTLFLTETGCVYATGLND 84

Query: 424 YGQLGLGDSID 434
           +GQLG+  ++ 
Sbjct: 85  FGQLGISGNLS 95


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 115/261 (44%), Gaps = 32/261 (12%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P L++L     I+ +A GG H + L+  G+V+ WG G  GQLG G  I  +  P L+ 
Sbjct: 37  LLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGD-ILNITLPKLVS 95

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
             +                         S + + A G  HS  V+D+G + T G G +GQ
Sbjct: 96  FFD------------------------DSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQ 131

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG T     P+  S   +  V+ +A G+ H++ +    +V  FG  + GQLG   D+ 
Sbjct: 132 LGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRI 191

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           ++V        L+      +S    HSA ++ DGQ  SWG       G     D + P  
Sbjct: 192 KSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWG------RGFCGGPDVHAPQS 245

Query: 441 VPIHGFLPRNIACGWWHTLLL 461
           +P      R +A GW H LLL
Sbjct: 246 LP-SPLSFREVAVGWNHALLL 265



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 156/376 (41%), Gaps = 47/376 (12%)

Query: 74  TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR-- 131
           +WG+  D GQ   T  +    P+   L +  S+   A G AH +++T  G+V+TWG    
Sbjct: 19  SWGAGTD-GQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSS 77

Query: 132 -ECVPSAKVTRDFGSAGSFQKDSTGKQSALP-TEQAPPSDKRAGEEVVKRRKTSSAREES 189
            +      +        SF  DS   Q+A   +     SD             +      
Sbjct: 78  GQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGC--------IFTCGNGSF 129

Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS- 248
                GD     +P  V+      +  VA G RH+L+L    QV G+G G  GQLG  S 
Sbjct: 130 GQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSD 189

Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
           RIK V  P ++  L+                           V  I+  G HSA ++  G
Sbjct: 190 RIKSVNLPCVVSGLKDVE------------------------VVRISANGDHSAAISADG 225

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
              ++G G  G  G      Q  PS       +   ++A G  H + ++V+G V+  G  
Sbjct: 226 QFFSWGRGFCG--GPDVHAPQSLPS------PLSFREVAVGWNHALLLTVDGEVFKLGST 277

Query: 369 QFGQLGTGVDQAENVPKLLE-TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
              Q      Q ++   L E  P  +  +   ++ GA HSA +TE+G+V +WGW ++GQL
Sbjct: 278 LNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQL 337

Query: 428 GLGDSIDRNIPSLVPI 443
           GLG++ D+  P LV +
Sbjct: 338 GLGNTNDQTSPELVSL 353



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 3/157 (1%)

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           ++G G  GQ G     D+L P   S      +  +A G  H + ++  G+V+ +G    G
Sbjct: 19  SWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSG 78

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G      +PKL+     +       + G  HS  +++ G + + G   +GQLG GD
Sbjct: 79  QLGHGDILNITLPKLVS--FFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGD 136

Query: 432 SIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           ++  + P+ V   +    + +ACG  H+L+L    Q+
Sbjct: 137 TLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQV 173



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 9/108 (8%)

Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           +V+ +G    GQLGT   Q E +P+LL    L S    +++CG  H   LT  G+V +WG
Sbjct: 16  QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPS--ISMLACGGAHVIALTSGGKVFTWG 73

Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI----ACGWWHTLLLAET 464
               GQLG GD ++  +P LV    F   ++    A GW H+  ++++
Sbjct: 74  RGSSGQLGHGDILNITLPKLVS---FFDDSVITQAAAGWSHSGFVSDS 118


>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Acyrthosiphon pisum]
          Length = 505

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 90/177 (50%), Gaps = 7/177 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V EI+CG  HS +V   G +  FG   +GQ G G T +  +P+   SL   +V+ IA G 
Sbjct: 36  VIEISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGR 95

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            HT+  +    VY FG N  GQLG  V    +    +E      K    +S G+ H+A L
Sbjct: 96  SHTIVSTENNIVYGFGDNSDGQLGQSVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAAL 155

Query: 411 TEDGQVLSWGWNKYGQLGLG----DSIDRNIPSLVPIHGFLP-RNIACGWWHTLLLA 462
            E+G V  WG N   QLGL     DS++ ++P++VPI   LP   ++CG  HT  + 
Sbjct: 156 LENGDVYVWGSNSDRQLGLNSMDDDSVNVSVPTIVPIA--LPVLYVSCGHTHTAFVT 210



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 123/271 (45%), Gaps = 50/271 (18%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK---MVPTPHLI 259
           P  VT      I +++AG  HT  L + G V+ WG   + QLGL S       V  P ++
Sbjct: 131 PIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSDRQLGLNSMDDDSVNVSVPTIV 190

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
           P           P+L                   ++CG  H+A VT  G L T G   YG
Sbjct: 191 PIA--------LPVLY------------------VSCGHTHTAFVTRIGDLYTCGDREYG 224

Query: 320 QCGHGSTNDQLRPSYASSLMDI--QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           + GHG         ++ S +D   ++ +++ G  HT+ ++  G+V+V G N  GQ+G  +
Sbjct: 225 KLGHGL--------WSLSRVDTTEKIVKVSCGANHTIALNDAGKVFVCGNNDCGQIG--L 274

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
               +   L   PI      ++V CG  HSA +T  G++   G  KYG+LG+ D      
Sbjct: 275 RNVTSQGHLYPCPITNEPIVQIV-CGQSHSAFITASGKLFMCGDGKYGKLGI-DVNQITT 332

Query: 438 PSLVPIHGFLPRN-----IACGWWHTLLLAE 463
           P+LV    F+ +N     ++CG  HTL+ AE
Sbjct: 333 PTLVL--AFVDKNLNVQMVSCGGNHTLIHAE 361



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 46/263 (17%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +++ G  H+ I+   G+V+ +G    GQLGLG   + V  P+ +  L        +P 
Sbjct: 36  VIEISCGEEHSGIVCKNGRVFCFGKNSFGQLGLG-HTENVYKPNCVKSL--------KP- 85

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTNDQLR 331
                            VK IACG  H+ V T+   +  FG    GQ G           
Sbjct: 86  ---------------DKVKHIACGRSHTIVSTENNIVYGFGDNSDGQLGQSVADVTHSDV 130

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P   +   D  + Q++AG +HT  +   G VYV+G N   QLG      ++V   + T +
Sbjct: 131 PIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSDRQLGLNSMDDDSVNVSVPTIV 190

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-------DSIDRNIPSLVPIH 444
             +     VSCG  H+A +T  G + + G  +YG+LG G       D+ ++ +       
Sbjct: 191 PIALPVLYVSCGHTHTAFVTRIGDLYTCGDREYGKLGHGLWSLSRVDTTEKIVK------ 244

Query: 445 GFLPRNIACGWWHTLLLAETTQI 467
                 ++CG  HT+ L +  ++
Sbjct: 245 ------VSCGANHTIALNDAGKV 261


>gi|357160277|ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 534

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 133/259 (51%), Gaps = 30/259 (11%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGK 269
           G++I + AAG   T+++SD G+V+ +G    G++  G +  ++V TP ++  L+      
Sbjct: 197 GIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYGVQGSRVVTTPQMVESLKDI---- 252

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                               Y+ + A G   +AV++  G + TF WG   + GH +  + 
Sbjct: 253 --------------------YIVQAAIGNFFTAVLSREGCVYTFSWGSDMKLGHQTEPND 292

Query: 330 LRPSYASS-LMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGTGVDQAENVPK 385
           ++P   +  L +I V QIAAG  + + ++ +     VY  G    G+LG G    E  P+
Sbjct: 293 VQPHLLTGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPR 352

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG 445
           L+E     + +  VV+ GA H+AV+++DG+V +WGW +YG LG G+    ++P +V   G
Sbjct: 353 LIEQFQTLNIQPVVVAAGAWHAAVVSKDGRVCTWGWGRYGCLGHGNEECESVPKVVEALG 412

Query: 446 FLPR-NIACGWWHTLLLAE 463
            +   ++A G + T ++++
Sbjct: 413 SVKAVHVATGDYTTFVVSD 431



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 162/385 (42%), Gaps = 88/385 (22%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGW 113
            G G ++A + SG + T+GS ++ GQ     G  G   E  P P  +     +++AAAG 
Sbjct: 153 AGPGHSIAVTTSGAVYTFGS-NNSGQL----GHDGLEEEWRPRPIRSLQGIRIIQAAAGA 207

Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
              + V++AG VY +G                     KDS G                  
Sbjct: 208 GRTMLVSDAGRVYAFG---------------------KDSFG------------------ 228

Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
                         E E    G    T +P +V     + I + A G   T +LS  G V
Sbjct: 229 --------------EVEYGVQGSRVVT-TPQMVESLKDIYIVQAAIGNFFTAVLSREGCV 273

Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
           + + +G + +LG  +    V  PHL+       +G    + V Q +      AG  Y+  
Sbjct: 274 YTFSWGSDMKLGHQTEPNDV-QPHLL-------TGPLENIPVVQIA------AGYCYLLA 319

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL--MDIQVEQIAAGLW 351
           +AC            ++ + G GL G+ GHGS  D+  P        ++IQ   +AAG W
Sbjct: 320 LACQ-------PSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQTLNIQPVVVAAGAW 372

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           H   +S +GRV  +G  ++G LG G ++ E+VPK++E   L S +A  V+ G   + V++
Sbjct: 373 HAAVVSKDGRVCTWGWGRYGCLGHGNEECESVPKVVEA--LGSVKAVHVATGDYTTFVVS 430

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRN 436
           + G V S+G  +   LG    I+ N
Sbjct: 431 DKGDVYSFGCGESSSLGHNTIIEGN 455



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 6/167 (3%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT +GA+ TFG    GQ GH    ++ RP    SL  I++ Q AAG   T+ +S  
Sbjct: 157 HSIAVTTSGAVYTFGSNNSGQLGHDGLEEEWRPRPIRSLQGIRIIQAAAGAGRTMLVSDA 216

Query: 360 GRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           GRVY FG + FG++  GV  +  V  P+++E+  L+       + G   +AVL+ +G V 
Sbjct: 217 GRVYAFGKDSFGEVEYGVQGSRVVTTPQMVES--LKDIYIVQAAIGNFFTAVLSREGCVY 274

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLA 462
           ++ W    +LG     +   P L+  P+       IA G+ + L LA
Sbjct: 275 TFSWGSDMKLGHQTEPNDVQPHLLTGPLENIPVVQIAAGYCYLLALA 321



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ ++  G VY FG N  GQLG    + E  P+ + +  L+  R    + GA
Sbjct: 150 QAIAGPGHSIAVTTSGAVYTFGSNNSGQLGHDGLEEEWRPRPIRS--LQGIRIIQAAAGA 207

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLG 430
             + ++++ G+V ++G + +G++  G
Sbjct: 208 GRTMLVSDAGRVYAFGKDSFGEVEYG 233



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 67/181 (37%), Gaps = 25/181 (13%)

Query: 82  GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW----------R 131
           G    T  K+    E F       VV AA  W H   V++ G V TWGW           
Sbjct: 341 GHGSRTDEKYPRLIEQFQTLNIQPVVVAAGAW-HAAVVSKDGRVCTWGWGRYGCLGHGNE 399

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
           EC    KV    GS  +    +    + + +++        GE       +SS    +  
Sbjct: 400 ECESVPKVVEALGSVKAVHVATGDYTTFVVSDKGDVYSFGCGE-------SSSLGHNTII 452

Query: 192 PASGDEFFTLSPCLVT-------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
             +      LSP LVT           V +T       HT  L++ G+++ +G G +GQL
Sbjct: 453 EGNNRHSNVLSPELVTSLKRTNERVVQVSLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512

Query: 245 G 245
           G
Sbjct: 513 G 513


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           I+CG  H+AVVT  G L  FG   +GQ G GS N   +P+   +L   + +    G  HT
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT 103

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  + +G VY  GGN  GQLG G D  E     L +      + K ++ G+  SA +TED
Sbjct: 104 LVYTEKGNVYAAGGNSEGQLGLG-DTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTED 162

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           GQ+  WG N  GQ+GL D    ++P  V + G    +I+CG++H+  + 
Sbjct: 163 GQLFVWGDNSEGQIGLADKTCVSVPCQVDV-GKPVSSISCGYYHSAFIT 210



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 139/294 (47%), Gaps = 43/294 (14%)

Query: 204 CLVTLNPGVKITKVAAGGR-HTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVP 254
           C+  L P  + TK+A  GR HTL+ ++ G V+  G   EGQLGLG          I    
Sbjct: 84  CVKALKP--EKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFT 141

Query: 255 TPHLIPCL-----EHAASGKDRPLLV----RQGSVNSSGKAGRSY---------VKEIAC 296
             H I  L       AA  +D  L V     +G +  + K   S          V  I+C
Sbjct: 142 NQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSISC 201

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR----PSYASSLMDIQVEQIAAGLWH 352
           G  HSA +T  G L TFG    G+ G     +QL+    P     +M+ +V ++A G  H
Sbjct: 202 GYYHSAFITGDGELYTFGEPENGKLGL--LPEQLKNSRVPQPVLGIME-KVNKVACGGEH 258

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLT 411
           TV ++  G VY FG  Q+GQLG G    + +VPK ++   L S +   V+CG  H+AV+ 
Sbjct: 259 TVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKH--LRSHKIHNVTCGESHTAVIA 315

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLA 462
           E+G + ++G  ++G+LGLG+    N         FL      +ACG  H L+ A
Sbjct: 316 ENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVFA 369



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 32/251 (12%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           ++ G  HT +++  G+++ +G    GQLGLGS+   V  P  +  L        +P    
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSK-NTVRKPTCVKAL--------KP---- 90

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                          K   CG  H+ V T+ G +   G    GQ G G T ++      S
Sbjct: 91  ------------EKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLIS 138

Query: 337 SLMDI-QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
              +  +++Q+AAG + +  ++ +G+++V+G N  GQ+G       +VP  ++      K
Sbjct: 139 FFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV----GK 194

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIAC 453
               +SCG  HSA +T DG++ ++G  + G+LGL     +N     P+ G + +   +AC
Sbjct: 195 PVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVAC 254

Query: 454 GWWHTLLLAET 464
           G  HT++L ET
Sbjct: 255 GGEHTVVLTET 265


>gi|242065672|ref|XP_002454125.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
 gi|241933956|gb|EES07101.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
          Length = 535

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 29/278 (10%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG-EGQLGLGSRIKMV 253
           GD      PC++    G++IT+ A G R T+++SD G V+ +G     G   +      +
Sbjct: 180 GDSEDRFRPCIIRSLQGIRITQAAVGSRWTMLVSDTGSVYAFGKDNFRGAEVVDDAHIQI 239

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
            TP ++  L+                          +V + A GG  SAV++  G + TF
Sbjct: 240 TTPKIVESLKGV------------------------FVVQAAIGGYFSAVLSREGRVYTF 275

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR---VYVFGGNQF 370
            WG   + GH S    + P   S L D+ V  I+AG  + + ++ +     VY  G    
Sbjct: 276 SWGKEERLGHSSDPSDVEPRLLSGLEDVPVAYISAGNCYLLMLAYQPNGMSVYSVGCGLG 335

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           G+LG G    + +PKL+E     S +   ++ G  H+A L  DG+V +WGW   G LG G
Sbjct: 336 GKLGHGCKTNKGMPKLIEQFQSLSFKPVSIAAGTWHAAALGADGRVCTWGWGHTGCLGHG 395

Query: 431 DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           D   + +P+LV  +      +++ G + T ++AE   +
Sbjct: 396 DEEYKAVPTLVEGLRDVKAVHLSTGEYTTFVVAENGDV 433



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
            +  G  HS V++  G + +FG    GQ G G + D+ RP    SL  I++ Q A G   
Sbjct: 149 RVIAGPGHSIVISSNGDVYSFGANCSGQLGLGDSEDRFRPCIIRSLQGIRITQAAVGSRW 208

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKVV---SCGARHSA 408
           T+ +S  G VY FG + F     G +  ++    + TP I+ES +   V   + G   SA
Sbjct: 209 TMLVSDTGSVYAFGKDNF----RGAEVVDDAHIQITTPKIVESLKGVFVVQAAIGGYFSA 264

Query: 409 VLTEDGQVLSWGWNKYGQLG 428
           VL+ +G+V ++ W K  +LG
Sbjct: 265 VLSREGRVYTFSWGKEERLG 284



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 124/294 (42%), Gaps = 54/294 (18%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P +V    GV + + A GG  + +LS  G+V+ + +G E +LG  S    V  P L+  
Sbjct: 241 TPKIVESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWGKEERLGHSSDPSDV-EPRLLSG 299

Query: 262 LE-----HAASGKDRPLLVRQG----SVNSSG-----------KAGRSYVK--------- 292
           LE     + ++G    L++       SV S G           K  +   K         
Sbjct: 300 LEDVPVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGGKLGHGCKTNKGMPKLIEQFQSLS 359

Query: 293 ----EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
                IA G  H+A +   G + T+GWG  G  GHG    +  P+    L D++   ++ 
Sbjct: 360 FKPVSIAAGTWHAAALGADGRVCTWGWGHTGCLGHGDEEYKAVPTLVEGLRDVKAVHLST 419

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA---KVVSC--- 402
           G + T  ++  G VY FG  +   +    D+AE  P      I+ S +A   KVV     
Sbjct: 420 GEYTTFVVAENGDVYSFGSGE-SLVFQEDDEAEEGPDFSTPSIVSSLKALNKKVVQISPT 478

Query: 403 ----------GARHSAVLTEDGQVLSWGWNKYGQLG--LGDSIDR-NIPSLVPI 443
                     G  H+  + + G + ++G    GQLG  L + +++ ++P  VPI
Sbjct: 479 NASYWLNSEMGHPHTFAVMDSGDLCAFGGGIRGQLGVKLLEGVEKVSVPMHVPI 532



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIH 444
           +L+  ++  K    V  G  HS V++ +G V S+G N  GQLGLGDS DR  P ++  + 
Sbjct: 136 VLKYILVREKNGSRVIAGPGHSIVISSNGDVYSFGANCSGQLGLGDSEDRFRPCIIRSLQ 195

Query: 445 GFLPRNIACGWWHTLLLAETTQI 467
           G      A G   T+L+++T  +
Sbjct: 196 GIRITQAAVGSRWTMLVSDTGSV 218


>gi|383851572|ref|XP_003701306.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Megachile rotundata]
          Length = 864

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 143/305 (46%), Gaps = 50/305 (16%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI--KMVPTPHLI-- 259
           C+  L P  K+T VA G  HTLI +   +++  G   EGQLG G+        +P L+  
Sbjct: 152 CVKVLKPE-KVTHVACGRAHTLISTGAQKIFACGSDQEGQLGRGTSAIGDSSSSPVLVYD 210

Query: 260 ------PCLEHAASGKDRPLLVRQGSV-----NSSGKAGR----------------SYVK 292
                   L+ AA       L+  G V     N  G+ G                   VK
Sbjct: 211 AGLAGSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEPVK 270

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE------QI 346
           +I+ G  HSA +T++G +   G    G+ G       +  ++++ +   Q++       +
Sbjct: 271 QISAGYYHSAFLTESGLVYICGESESGKLG-------IDVNFSTQITPKQMQLPSPAVHV 323

Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGAR 405
           A G  HTV ++  G +Y  G N  GQLG G +  E + PKLL   +L+++    +SCG  
Sbjct: 324 ACGGHHTVVLAENGNIYCTGSNSNGQLGLGTNVTELHTPKLLSRGMLQNETISRISCGES 383

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF---LPRNIACGWWHTLLLA 462
           H+A++TE G++ + G  ++G+LGL ++ + N+  L  +  +       +ACG  HT+LL 
Sbjct: 384 HTAIVTESGKLFTCGDGRHGKLGLEEN-ENNVHELTFVQRYKELFVSKVACGGCHTILLG 442

Query: 463 ETTQI 467
           +  ++
Sbjct: 443 QRREM 447



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 13/182 (7%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  I CG  HSAV+  +G L  FG   +GQ G G  N   +PS    L   +V  +A G 
Sbjct: 109 VVSITCGDEHSAVICQSGRLFVFGSNDWGQLGLGHRNHISKPSCVKVLKPEKVTHVACGR 168

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTG---VDQAENVPKLLETPILESKRAKVVSCGARHS 407
            HT+  +   +++  G +Q GQLG G   +  + + P L+    L   +   ++ G+ HS
Sbjct: 169 AHTLISTGAQKIFACGSDQEGQLGRGTSAIGDSSSSPVLVYDAGLAGSKILQLAAGSHHS 228

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLP---RNIACGWWHTLLLA 462
             L  DG V +WG N  GQLGL D     +  LV  P    +P   + I+ G++H+  L 
Sbjct: 229 LALISDGGVFAWGSNLEGQLGLPD-----VSGLVNKPTKVHIPEPVKQISAGYYHSAFLT 283

Query: 463 ET 464
           E+
Sbjct: 284 ES 285


>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
          Length = 1302

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 140/294 (47%), Gaps = 43/294 (14%)

Query: 204 CLVTLNPGVKITKVAAGGR-HTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVP 254
           C+  L P  + TK+A  GR HTL+ ++ G ++  G  GEGQLGLG          I    
Sbjct: 97  CVKALKP--EKTKLAVCGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFT 154

Query: 255 TPHLIPCL-----EHAASGKDRPLLV-RQGSVNSSGKAGRSYVK------------EIAC 296
             H I  L       AA  +D  L V    S    G A ++YV              I+C
Sbjct: 155 NQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVSVPCQVDVGKPISSISC 214

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR----PSYASSLMDIQVEQIAAGLWH 352
           G  HSA +T  G L TFG    G+ G     +QL+    P     +M+ +V ++A G  H
Sbjct: 215 GYYHSAFITGDGELYTFGEPENGKLG--LLPEQLKNSRVPQPVLGIME-KVNKVACGGEH 271

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLT 411
           TV ++  G VY FG  Q+GQLG G    + +VPK ++   L   + + ++CG  H+AV+ 
Sbjct: 272 TVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKH--LRKCKIRNITCGESHTAVIA 328

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLA 462
           E+G + ++G  ++G+LGLG+    N         FL      +ACG  H L+ A
Sbjct: 329 ENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVFA 382



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           I+CG  H+AVVT  G L  FG   +GQ G GS N   +P+   +L   + +    G  HT
Sbjct: 57  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHT 116

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G +Y  GGN  GQLG G D  E     L +      + K ++ G+  SA +TED
Sbjct: 117 LVYTENGNMYAAGGNGEGQLGLG-DTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTED 175

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           GQ+  WG N  GQ+GL D    ++P  V + G    +I+CG++H+  + 
Sbjct: 176 GQLFVWGDNSEGQIGLADKTYVSVPCQVDV-GKPISSISCGYYHSAFIT 223



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 32/251 (12%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           ++ G  HT +++  G+++ +G    GQLGLGS+     T H   C++     K       
Sbjct: 57  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSK----NTVHKPTCVKALKPEK------- 105

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                          K   CG  H+ V T+ G +   G    GQ G G T ++      S
Sbjct: 106 --------------TKLAVCGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLIS 151

Query: 337 SLMDI-QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
              +  +++Q+AAG + +  ++ +G+++V+G N  GQ+G       +VP  ++      K
Sbjct: 152 FFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVSVPCQVDV----GK 207

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIAC 453
               +SCG  HSA +T DG++ ++G  + G+LGL     +N     P+ G + +   +AC
Sbjct: 208 PISSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVAC 267

Query: 454 GWWHTLLLAET 464
           G  HT++L ET
Sbjct: 268 GGEHTVVLTET 278


>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
 gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
           1279]
          Length = 593

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 164/405 (40%), Gaps = 87/405 (21%)

Query: 54  DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA-- 111
           +    G  F+ A   +G++ +WG       +Y   G+   +P     PT+AS++  A   
Sbjct: 224 NTLAAGGYFSAAIKPNGQVWSWGD-----NTYGQLGRATTSPSD-STPTQASLINDAVSI 277

Query: 112 --GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
             G  H +++T  G V T G R+         D+G  G    DS+G  +A          
Sbjct: 278 SLGEYHAIALTNDGRVVTLG-RD---------DYGQLGDGPGDSSGTHTA---------- 317

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
                                 P   D           L  G+K   V AG  H+L L+ 
Sbjct: 318 ----------------------PNLRDNI---------LPAGIKAVAVQAGRYHSLALTS 346

Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV----- 280
            G V+ WG    GQLGLG+      +P LIP L      A+G D  L ++  GSV     
Sbjct: 347 EGTVYAWGRNDVGQLGLGTITAPQESPALIPGLSDVIALAAGDDHTLALKADGSVWAWGD 406

Query: 281 NSSGKAGRSY---------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
           N +G+ G                  VK IA GG HS  +   G + T+G+  +GQ G+GS
Sbjct: 407 NPNGELGTGDITPYSVPTAVSNLPGVKAIAAGGNHSVALLADGTVRTWGYNNHGQLGNGS 466

Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
             +   P   + L D  V  IAAG   T+ +   G V  +G +   QLG G    +    
Sbjct: 467 NTNSNVPVPVTGLTD--VVGIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGATTGDQTTP 524

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           +    I   +  + ++ G  H+  L +DG +++WG N  GQLG G
Sbjct: 525 VDVQGIPTGRSVRGLTAGIFHALALLDDGSMVAWGSNVQGQLGDG 569



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 121/281 (43%), Gaps = 41/281 (14%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS---- 267
           ++   +AAGG  +  +   GQVW WG    GQLG  +      TP     +  A S    
Sbjct: 221 LRANTLAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPSDSTPTQASLINDAVSISLG 280

Query: 268 ----------------GKDRPLLVRQGSVNSSGKAGRSYVKE-----------IACGGRH 300
                           G+D    +  G  +SSG      +++           +  G  H
Sbjct: 281 EYHAIALTNDGRVVTLGRDDYGQLGDGPGDSSGTHTAPNLRDNILPAGIKAVAVQAGRYH 340

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           S  +T  G +  +G    GQ G G+ T  Q  P+    L D  V  +AAG  HT+ +  +
Sbjct: 341 SLALTSEGTVYAWGRNDVGQLGLGTITAPQESPALIPGLSD--VIALAAGDDHTLALKAD 398

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
           G V+ +G N  G+LGTG    +  P  + T +      K ++ G  HS  L  DG V +W
Sbjct: 399 GSVWAWGDNPNGELGTG----DITPYSVPTAVSNLPGVKAIAAGGNHSVALLADGTVRTW 454

Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTL 459
           G+N +GQLG G + + N+P  VP+ G      IA G+  TL
Sbjct: 455 GYNNHGQLGNGSNTNSNVP--VPVTGLTDVVGIAAGYEFTL 493



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 8/117 (6%)

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           G+Y      S+ +  R +   +L  ++   +AAG + +  I   G+V+ +G N +GQLG 
Sbjct: 197 GVYNLIVQASSGNLTR-TAPLTLRVLRANTLAAGGYFSAAIKPNGQVWSWGDNTYGQLGR 255

Query: 376 GVDQAENVPKLLETPILES--KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
                 +      TP   S    A  +S G  H+  LT DG+V++ G + YGQLG G
Sbjct: 256 ATTSPSD-----STPTQASLINDAVSISLGEYHAIALTNDGRVVTLGRDDYGQLGDG 307


>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Strongylocentrotus purpuratus]
          Length = 782

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 42/284 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA-----ASG 268
           + K+A G  HT+ L+    +  +G GGEGQLG+G   K    P +I  LE       + G
Sbjct: 84  VVKIACGRVHTIALTKDRHLHSFGAGGEGQLGVGDS-KQYEAPRMIEELEEQDYLLLSCG 142

Query: 269 KDR-PLLVRQGSV-----NSSGKAGRSY---------------VKEIACGGRHSAVVTDA 307
            D    L   G++      S G+ G                  V+ ++CG  H+A++T+ 
Sbjct: 143 TDHSAALTASGTLYMWGGGSEGQLGHGEDTEVQIPRELSMGVPVRMVSCGYYHTALLTED 202

Query: 308 GALLTFGWGLYGQCGH-----GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
             L TFG G  G+ G      G  N+   P + S   +  V+ ++ G  HT  I+ +G V
Sbjct: 203 KKLYTFGEGEGGKLGLGEAHLGGVNE---PQHVSFFTE-PVDSVSCGNAHTAAITEKGHV 258

Query: 363 YVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           Y FG    GQLG G D  E N+PK +    LE  R K VSCG  H+A++T  G + ++G 
Sbjct: 259 YTFGNGASGQLGHGPDHLETNIPKRVAR--LEWTRCKWVSCGDCHTAIVTAKGCLYTFGD 316

Query: 422 NKYGQLGLGDSIDRNIPSLVPIH---GFLPRNIACGWWHTLLLA 462
            ++G+LG G+    N+ +   +H   GFL   ++CG  HTL+ A
Sbjct: 317 GRHGKLGQGEESFSNVFTPSKVHRFNGFLVEEVSCGGCHTLVRA 360



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 3/165 (1%)

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
           V+T+ G L  FG   +GQ G G      +PS    L    V +IA G  HT+ ++ +  +
Sbjct: 44  VITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKDRHL 103

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           + FG    GQLG G  +    P+++E   LE +   ++SCG  HSA LT  G +  WG  
Sbjct: 104 HSFGAGGEGQLGVGDSKQYEAPRMIEE--LEEQDYLLLSCGTDHSAALTASGTLYMWGGG 161

Query: 423 KYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
             GQLG G+  +  IP  + + G   R ++CG++HT LL E  ++
Sbjct: 162 SEGQLGHGEDTEVQIPRELSM-GVPVRMVSCGYYHTALLTEDKKL 205



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 29/195 (14%)

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
           +++++ G+++ +G    GQLGLG R K V  P  +  L+HA                   
Sbjct: 43  VVITENGRLYVFGANDWGQLGLGHR-KSVNKPSSVKGLKHAG------------------ 83

Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
                 V +IACG  H+  +T    L +FG G  GQ G G +     P     L +    
Sbjct: 84  ------VVKIACGRVHTIALTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYL 137

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
            ++ G  H+  ++  G +Y++GG   GQLG G D    +P+ L   +      ++VSCG 
Sbjct: 138 LLSCGTDHSAALTASGTLYMWGGGSEGQLGHGEDTEVQIPRELSMGVP----VRMVSCGY 193

Query: 405 RHSAVLTEDGQVLSW 419
            H+A+LTED ++ ++
Sbjct: 194 YHTALLTEDKKLYTF 208


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 182/411 (44%), Gaps = 46/411 (11%)

Query: 63   ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVT 120
            A+    S  L+TWGSA +    +  + K    P P  LP      +   ++G  +   +T
Sbjct: 706  AIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLT 765

Query: 121  EAGEVYTWGW----RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
            E G+VY WG        VP   + +       F+ +S     ++       +  RA  E+
Sbjct: 766  ENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFCHGAAVRANGEL 825

Query: 177  VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
            +     +    E+     GD    + P ++       IT+V  G +HT+ L+  G+V+ W
Sbjct: 826  L-----TWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSW 880

Query: 237  GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
            G    GQLGLG  +    +P  +  LE                        +  V +IA 
Sbjct: 881  GASEYGQLGLGD-VTQHSSPMQVSALE------------------------KYNVLQIAS 915

Query: 297  GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  H AV+T +  +L FG G       G+ +    P+   SL  + ++++  G + T  I
Sbjct: 916  GSTHCAVLTTSKEVLVFGNG----AAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAI 971

Query: 357  SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
            +  G VY +G  Q  +LG G +  E  PKL+E   L ++  + +SCG RH+A LT+ G++
Sbjct: 972  TECGDVYTWGTGQ--ELGHGGNSTETSPKLIEA--LRNQSIRQISCGGRHTAFLTDSGRI 1027

Query: 417  LSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQ 466
             + G + +GQLG   S D+N P  +  +      +++CG  + + L +TT+
Sbjct: 1028 FTCGKDSFGQLG-QMSGDQNKPKRIESLTKTTFISVSCGENYNVALFDTTR 1077


>gi|330837469|ref|YP_004412110.1| cell wall/surface repeat protein [Sphaerochaeta coccoides DSM
           17374]
 gi|329749372|gb|AEC02728.1| cell wall/surface repeat protein [Sphaerochaeta coccoides DSM
           17374]
          Length = 874

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 39/260 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           +  V+AG  HT+I+ + G +W  G    GQLGL S +                 G D+  
Sbjct: 555 VAAVSAGYYHTMIVKENGTLWATGNNQYGQLGLASIL-----------------GTDKNT 597

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND----- 328
            V+   V S G A    VK ++ G  H+ ++   G L   G   YGQ G G+T+      
Sbjct: 598 PVK---VTSMGAA----VKAVSAGSYHTMILKKDGTLWATGRNNYGQLGDGTTDSKGMPV 650

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           Q++ S   +     VE ++ G++HT+ +  +G ++  G N++GQLG G     + P  + 
Sbjct: 651 QVKASTTPNDFMTDVEAVSTGVYHTMILKKDGTLWATGYNEYGQLGDGTSNDRSTPVQV- 709

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS-IDRNIPSLV----PI 443
             +        VS G  H+ +L +DG + + G N YGQLG  DS  ++N P  V     I
Sbjct: 710 --LSMGADVAAVSAGENHTMILKKDGTLWATGQNTYGQLGDSDSGTNKNTPVQVKDDTDI 767

Query: 444 HGFLPR--NIACGWWHTLLL 461
            GF+     ++ G+ HT++L
Sbjct: 768 SGFMTDVAAVSAGYGHTMIL 787



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 123/264 (46%), Gaps = 26/264 (9%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  VT + G  +  V+AG  HT+IL   G +W  G    GQLG G+             
Sbjct: 597 TPVKVT-SMGAAVKAVSAGSYHTMILKKDGTLWATGRNNYGQLGDGT------------- 642

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                  K  P+ V+    +++     + V+ ++ G  H+ ++   G L   G+  YGQ 
Sbjct: 643 ----TDSKGMPVQVK---ASTTPNDFMTDVEAVSTGVYHTMILKKDGTLWATGYNEYGQL 695

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG---TGVD 378
           G G++ND+  P    S M   V  ++AG  HT+ +  +G ++  G N +GQLG   +G +
Sbjct: 696 GDGTSNDRSTPVQVLS-MGADVAAVSAGENHTMILKKDGTLWATGQNTYGQLGDSDSGTN 754

Query: 379 QAENVPKLLETPIL-ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
           +   V    +T I         VS G  H+ +L  DG + + G N+YGQLG+G+  D + 
Sbjct: 755 KNTPVQVKDDTDISGFMTDVAAVSAGYGHTMILKMDGTLWAIGRNEYGQLGVGNHNDTST 814

Query: 438 PSLVPIHGFLPRNIACGWWHTLLL 461
           P  V   G     +  G  +T++L
Sbjct: 815 PVQVSSMGSDVAAVFAGEAYTMIL 838



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 8/123 (6%)

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           ++V+ ++   +HT+ + ++G ++  G N   QLG G +   N P  + T +        V
Sbjct: 505 VKVKSVSFKSFHTMLLKIDGTLWATGQNTHSQLGVGGNTNINTPVKVMTDV------AAV 558

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI--DRNIPSLVPIHGFLPRNIACGWWHT 458
           S G  H+ ++ E+G + + G N+YGQLGL   +  D+N P  V   G   + ++ G +HT
Sbjct: 559 SAGYYHTMIVKENGTLWATGNNQYGQLGLASILGTDKNTPVKVTSMGAAVKAVSAGSYHT 618

Query: 459 LLL 461
           ++L
Sbjct: 619 MIL 621


>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
           livia]
          Length = 719

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 142/296 (47%), Gaps = 47/296 (15%)

Query: 204 CLVTLNPGVKITKVAAGGR-HTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVP 254
           C+  L P  + TK+A  GR HTL+ ++ G V+  G   EGQLGLG          I    
Sbjct: 75  CVKALKP--EKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFT 132

Query: 255 TPHLIPCL-----EHAASGKDRPLLV----RQGSVNSSGKAGRSY---------VKEIAC 296
             H I  L       AA  +D  L V     +G +  + +A  S          V  I+C
Sbjct: 133 NQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDVGKPVSSISC 192

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR----PSYASSLMDIQVEQIAAGLWH 352
           G  HSA++T  G L TFG    G+ G     +QL+    P     +M+ +V ++A G  H
Sbjct: 193 GYYHSALITGDGELYTFGEPENGKLG--LLPEQLKNNRVPQPVPGIME-KVNKVACGGEH 249

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKV--VSCGARHSAV 409
           TV ++ E  VY FG  Q+GQLG G    E +VPK     +   +R K+  ++CG  H+AV
Sbjct: 250 TVVLT-ETDVYTFGLGQYGQLGHGTFIFETSVPK----SVKHLRRHKICNITCGENHTAV 304

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLA 462
           + E+G + ++G  ++G+LGLG+    N       + FL      +ACG  H L+ A
Sbjct: 305 VAENGLMFTFGDGRHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACGGCHMLVFA 360



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 90/169 (53%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           I+CG  H+A+VT  G L  FG   +GQ G GS N   +P+   +L   + +    G  HT
Sbjct: 35  ISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHT 94

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  + +G VY  GGN  GQLG G D  E     L +      + K ++ G+  SA +TED
Sbjct: 95  LVYTEKGNVYAAGGNSEGQLGLG-DTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTED 153

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           GQ+  WG N  GQ+GL D    ++P  V + G    +I+CG++H+ L+ 
Sbjct: 154 GQLFVWGDNSEGQIGLADEACVSVPCQVDV-GKPVSSISCGYYHSALIT 201



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 121/251 (48%), Gaps = 32/251 (12%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           ++ G  HT I++  G+++ +G    GQLGLGS+   V  P  +  L+   +         
Sbjct: 35  ISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSK-NTVSKPTCVKALKPEKT--------- 84

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                          K   CG  H+ V T+ G +   G    GQ G G T ++      S
Sbjct: 85  ---------------KLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLIS 129

Query: 337 SLMDI-QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
              +  +++Q+AAG + +  ++ +G+++V+G N  GQ+G   +   +VP  ++      K
Sbjct: 130 FFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDV----GK 185

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIAC 453
               +SCG  HSA++T DG++ ++G  + G+LGL     +N     P+ G + +   +AC
Sbjct: 186 PVSSISCGYYHSALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVNKVAC 245

Query: 454 GWWHTLLLAET 464
           G  HT++L ET
Sbjct: 246 GGEHTVVLTET 256



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 13/111 (11%)

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +C+   G V+ FG ++F         AE++P        ++ +  ++SCG  H+A++T +
Sbjct: 1   LCVLESGAVFTFGKSRF---------AEDIPSKF---WFKNDKPVLISCGDEHTAIVTGN 48

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA-CGWWHTLLLAE 463
           G++  +G N +GQLGLG     + P+ V         +A CG  HTL+  E
Sbjct: 49  GKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHTLVYTE 99


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 4/177 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ I+CGGRH+ +VT  G + ++G    G+ GHG   D  +P    +L ++ +E +A G 
Sbjct: 312 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGE 371

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G   +  G LG G + +  VPK +  P LE      +SCG  H+A
Sbjct: 372 YHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGP-LEGIHVSAISCGPWHTA 430

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
           ++T  GQ+ ++G   +G LG GD    ++P  V  + G      ACG WHT  + E 
Sbjct: 431 IVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEV 487



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 120/257 (46%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ ++ G  HT I++  GQ++ +G G  G LG G R + +  P  +  L+       
Sbjct: 416 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR-QSLSVPREVESLK------- 467

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G + T+G G  
Sbjct: 468 ----------------GLRTVRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 510

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG  + +L P+  ++L++    QIA G   TV ++  G VY  G   +GQLG    
Sbjct: 511 GRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN--P 568

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
           QA+ +  +     L     + +SCGA H AVLT   +V +WG    G+LG GD+ DR+ P
Sbjct: 569 QADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSP 628

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     R + CG
Sbjct: 629 TLVEALKDKQVRTVVCG 645



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 6/148 (4%)

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           G   D L P      + + V+ I+ G  H   ++ +G +Y +G    G+LG GVD     
Sbjct: 293 GVNMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQ 352

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV 441
           PKL++   L +   ++V+CG  H+  +T  G + +WG   +  G LG G+ +   +P  V
Sbjct: 353 PKLIDA--LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 410

Query: 442 --PIHGFLPRNIACGWWHTLLLAETTQI 467
             P+ G     I+CG WHT ++    Q+
Sbjct: 411 NGPLEGIHVSAISCGPWHTAIVTSAGQL 438



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 25/165 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         ++A G   T+ L+  G V+  G    GQLG      M+P
Sbjct: 516 GDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLP 575

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                                    V   GK  +++V+EI+CG  H AV+T    + T+G
Sbjct: 576 -------------------------VRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWG 610

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            G  G+ GHG T+D+  P+   +L D QV  +  G+  T  I + 
Sbjct: 611 KGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIH 655



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 41/213 (19%)

Query: 211 GVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPH 257
           G++  + A G  HT  + ++            G+++ WG G +G+LG G +  ++VPT  
Sbjct: 468 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT-- 525

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
              C+           LV                 +IACG   +  +T +G + T G  +
Sbjct: 526 ---CVA---------ALVEPNFC------------QIACGHCMTVALTTSGHVYTMGSPV 561

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           YGQ G+   +  L       L    VE+I+ G +H   ++    VY +G    G+LG G 
Sbjct: 562 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 621

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
               + P L+E   L+ K+ + V CG   +A +
Sbjct: 622 TDDRSSPTLVEA--LKDKQVRTVVCGINFTAAI 652


>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
 gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
          Length = 1711

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 32/254 (12%)

Query: 217  VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
            V+ G +H  +L++ G V+ WG   +G+LG G  +                SG   P+ V 
Sbjct: 870  VSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLL--------------GDSGYVPPMRVE 914

Query: 277  QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRPSY 334
              S+       R  V  +ACG  H+  + D G    + WG   YGQ G G  + Q  P+ 
Sbjct: 915  TLSIQ------RVQVMAVACGQEHTLALCDNGV---YAWGSSTYGQLGLGDWDRQTHPTL 965

Query: 335  ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
             + L D+    +A G +H+  +  EGRV+++G    GQLG G  +  N P L    +   
Sbjct: 966  VTQLKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPHL----VAAV 1021

Query: 395  KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
            + A  VS G  H+AVLT  G+V ++G   +GQLG G +   +IP  V  I G + + +AC
Sbjct: 1022 QNAVQVSTGYAHTAVLTRSGEVFTFGCGLHGQLGHGATDKVSIPQRVQGIMGKVAQ-VAC 1080

Query: 454  GWWHTLLLAETTQI 467
            G +HT+++  + Q+
Sbjct: 1081 GLFHTVVVTSSQQV 1094



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 117/267 (43%), Gaps = 70/267 (26%)

Query: 203  PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
            P LVT    V    VA G  H+  L   G+VW WG+G  GQLG G+  + +  PHL+  +
Sbjct: 963  PTLVTQLKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGN-AENLNKPHLVAAV 1021

Query: 263  EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
            ++A                           +++ G  H+AV+T +G + TFG GL+GQ G
Sbjct: 1022 QNAV--------------------------QVSTGYAHTAVLTRSGEVFTFGCGLHGQLG 1055

Query: 323  HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN-----QFGQLGTGV 377
            HG+T+    P     +M  +V Q+A GL+HTV ++   +VY FG +     Q+  L    
Sbjct: 1056 HGATDKVSIPQRVQGIMG-KVAQVACGLFHTVVVTSSQQVYTFGRHPQVWKQY--LQNSR 1112

Query: 378  DQAENVPKLLETPILESK------------------RAKVVSCGARHSAVLT-------- 411
             QA       ++P   +                   R + V  GA H+ +LT        
Sbjct: 1113 RQARASTSYTQSPAKHAMGLSGELFKPLWVQCRVEGRIRQVVAGAVHNMLLTSSVVAIAA 1172

Query: 412  -ED--------GQVLSWGWNKYGQLGL 429
             ED        G+V  WG N +GQLG+
Sbjct: 1173 GEDFSVAVDRSGKVWVWGRNSHGQLGI 1199



 Score = 42.0 bits (97), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 14/97 (14%)

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG----LGD 431
           G + A  VP   + P+    +A VVSCG +H A+LTE+G V +WG    G+LG    LGD
Sbjct: 849 GPETAGEVPVKRKPPL---SQAAVVSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGD 904

Query: 432 SIDRNIPSL----VPIHGFLPRNIACGWWHTLLLAET 464
           S    +P +    + I       +ACG  HTL L + 
Sbjct: 905 S--GYVPPMRVETLSIQRVQVMAVACGQEHTLALCDN 939


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 129/299 (43%), Gaps = 47/299 (15%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A GG+H ++++  G+ + WG   EG+LG G     +  P LI  L     E  A
Sbjct: 308 LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN-IQQPKLIDALNTTNIELVA 366

Query: 267 SGKDRPLLVR-QGSVNSSGKAGRS-----------------------YVKEIACGGRHSA 302
            G+     V   G + + GK                           +V  IACG  H+A
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTA 426

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI------ 356
           VVT AG L TFG G +G  GHG       P    SL  ++  + A G+WHT  +      
Sbjct: 427 VVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 486

Query: 357 ------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
                    G+++ +G    G+LG G  + + VP  +   ++E    + V+CG   +  L
Sbjct: 487 SSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCV-AALVEPNFCQ-VACGHSLTVAL 544

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           T  G V + G   YGQLG     D  +P+ V   +H      IACG +H  +L   T++
Sbjct: 545 TTSGHVYTMGSPVYGQLG-NSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 123/257 (47%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ +A G  HT +++  GQ++ +G G  G LG G + K V  P  +  L+       
Sbjct: 412 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK-KSVFIPREVDSLK------- 463

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G L T+G G  
Sbjct: 464 ----------------GLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK 506

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG+   +L P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 507 GRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHA 566

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
             + +P  +E  + +S   + ++CGA H AVLT   +V +WG    G+LG GD  DRN P
Sbjct: 567 DGK-LPNRVEGKLHKS-FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSP 624

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     ++IACG
Sbjct: 625 TLVESLKDKQVKSIACG 641



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 39/228 (17%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEG 242
           GD+     P  V    G++  + A G  HT  + ++            G+++ WG G +G
Sbjct: 448 GDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKG 507

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           +LG G++      P L+P    A        LV                 ++ACG   + 
Sbjct: 508 RLGHGNK-----EPKLVPTCVAA--------LVEPNFC------------QVACGHSLTV 542

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +T +G + T G  +YGQ G+   + +L       L    VE+IA G +H   ++    V
Sbjct: 543 ALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           Y +G    G+LG G     N P L+E+  L+ K+ K ++CG   +A +
Sbjct: 603 YTWGKGSNGRLGHGDVDDRNSPTLVES--LKDKQVKSIACGTNFTAAV 648


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 2/174 (1%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGG+H+ +VT  G   ++G    G+ GHG  ++  +P    +L    +E +A G 
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGE 356

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           +H+  +++ G +Y +G   FG LG G + +  VPK +   +LE      ++CG  H+AV+
Sbjct: 357 FHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHTAVV 415

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           T  GQ+ ++G   +G LG GD     IP  V  + G      ACG WHT  + E
Sbjct: 416 TSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 469



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 128/299 (42%), Gaps = 47/299 (15%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A GG+H ++++  G+ + WG   EG+LG G     +  P LI  L     E  A
Sbjct: 295 LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN-IQQPKLIDALNTTNIELVA 353

Query: 267 SGKDRPLLVR-QGSVNSSGKAGRS-----------------------YVKEIACGGRHSA 302
            G+     V   G + + GK                           +V  IACG  H+A
Sbjct: 354 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTA 413

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI------ 356
           VVT AG L TFG G +G  GHG       P    SL  ++  + A G+WHT  +      
Sbjct: 414 VVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 473

Query: 357 ------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
                    G+++ +G    G+LG G  + + VP  +   ++E    + V+CG   +  L
Sbjct: 474 SSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCV-AALVEPNFCQ-VACGHSLTVAL 531

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           T  G V + G   YGQLG     D   P+ V   +H      IACG +H  +L   T++
Sbjct: 532 TTSGHVYTMGSPVYGQLG-NSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 589



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ +A G  HT +++  GQ++ +G G  G LG G + K V  P  +  L+       
Sbjct: 399 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK-KSVFIPREVDSLK------- 450

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G L T+G G  
Sbjct: 451 ----------------GLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK 493

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG+   +L P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 494 GRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHA 553

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
             +  P  +E  + +S   + ++CGA H AVLT   +V +WG    G+LG GD  DRN P
Sbjct: 554 DGK-TPNRVEGKLHKS-FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSP 611

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     ++IACG
Sbjct: 612 TLVESLKDKQVKSIACG 628



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 39/228 (17%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEG 242
           GD+     P  V    G++  + A G  HT  + ++            G+++ WG G +G
Sbjct: 435 GDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKG 494

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           +LG G++      P L+P    A        LV                 ++ACG   + 
Sbjct: 495 RLGHGNK-----EPKLVPTCVAA--------LVEPNFC------------QVACGHSLTV 529

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +T +G + T G  +YGQ G+   + +        L    VE+IA G +H   ++    V
Sbjct: 530 ALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 589

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           Y +G    G+LG G     N P L+E+  L+ K+ K ++CG   +A +
Sbjct: 590 YTWGKGSNGRLGHGDVDDRNSPTLVES--LKDKQVKSIACGTNFTAAV 635


>gi|395521930|ref|XP_003765067.1| PREDICTED: regulator of chromosome condensation [Sarcophilus
           harrisii]
          Length = 421

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 175/413 (42%), Gaps = 38/413 (9%)

Query: 67  SESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
           +E+G ++T G  D  GQ  L  G+H  E   P  +P   S+V+A AG  H V + ++G+V
Sbjct: 32  TEAGLVLTLGQGD-VGQ--LGLGEHVIERKRPALVPMPESIVQAEAGGMHTVCLGKSGQV 88

Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
           YT+G   C     + RD    GS         S    + +      A      R     +
Sbjct: 89  YTFG---CNDEGALGRDTSVEGSETVPGVVNLSEKVVQVSAGDSHTAALTEDGRVFLWGS 145

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
             ++       E    S   V +   V + KVA+G  H ++L+  G ++  G G +GQLG
Sbjct: 146 FRDNNGVIGLLEPMKKSMVPVQVQLDVPVIKVASGNDHLVMLTIDGNLYTSGCGEQGQLG 205

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
                     P           G DR L+ +   + S G  G    ++  CG   +  V+
Sbjct: 206 --------RVPEFFAN-RGGRKGLDRLLIPQCVLLKSRGHRGSVLFQDAFCGAYFTFAVS 256

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI--AAGLWHTVCISVEGRVY 363
             G +  FG   Y Q G  ST     P   +S  +     +  + G  HTVC+  EG+VY
Sbjct: 257 REGHVYGFGLSNYHQLGTPSTEPCFAPQSLTSFKNSTKSWVGFSGGQHHTVCLDSEGKVY 316

Query: 364 VFGGNQFGQLGTGVDQAEN-----VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
             G  ++G+LG GV   E      +PKL   P + S     V+CGA     +T+DG+  +
Sbjct: 317 SLGRAEYGRLGLGVGAEEKSCPTLIPKL---PPVSS-----VACGASVGYAVTKDGRAFA 368

Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----IACGWWHTLLLAETTQ 466
           WG     QLG G+  D ++ S V + G    N     ++ G  HT+LL    +
Sbjct: 369 WGMGTNFQLGTGE--DEDVWSPVVMSGKQLENRVVLSVSSGGQHTVLLVRNKE 419



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 17/170 (10%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
           H +  T+AG +LT G G  GQ G G    ++ RP+     M   + Q  AG  HTVC+  
Sbjct: 27  HRSHRTEAGLVLTLGQGDVGQLGLGEHVIERKRPALVP--MPESIVQAEAGGMHTVCLGK 84

Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
            G+VY FG N  G LG  T V+ +E VP ++      S++   VS G  H+A LTEDG+V
Sbjct: 85  SGQVYTFGCNDEGALGRDTSVEGSETVPGVVNL----SEKVVQVSAGDSHTAALTEDGRV 140

Query: 417 LSWG--WNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLL 461
             WG   +  G +GL + + +   S+VP+   L      +A G  H ++L
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKK---SMVPVQVQLDVPVIKVASGNDHLVML 187



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 13/84 (15%)

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS-IDRNIPSLVPIHGF 446
           E   +ESK+ KV      H +  TE G VL+ G    GQLGLG+  I+R  P+LVP    
Sbjct: 14  ENATIESKKVKV-----GHRSHRTEAGLVLTLGQGDVGQLGLGEHVIERKRPALVP---- 64

Query: 447 LPRNIA---CGWWHTLLLAETTQI 467
           +P +I     G  HT+ L ++ Q+
Sbjct: 65  MPESIVQAEAGGMHTVCLGKSGQV 88


>gi|330836304|ref|YP_004410945.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
 gi|329748207|gb|AEC01563.1| Listeria/Bacterioides repeat-containing protein [Sphaerochaeta
           coccoides DSM 17374]
          Length = 786

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 39/263 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +  V+ G  HT+IL   G +W  G   +GQLGLG                 ++SG D
Sbjct: 516 GSDVAAVSTGASHTMILKKNGTLWATGQNNDGQLGLGD----------------SSSGTD 559

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-- 328
           R   V+  ++ S        V+ ++ G  H+ ++   G L   G    GQ G G+T    
Sbjct: 560 RSTPVQVLAMGSD-------VEAVSAGSYHTMILKKDGTLWATGRNYDGQLGDGTTTSRT 612

Query: 329 ---QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
              Q++ S         V+ ++AG +HT+ +  +G ++V G NQ+GQLG G     N   
Sbjct: 613 TPVQVKASPTFGDFMTNVKAVSAGGFHTMILKKDGTLWVTGRNQYGQLGDGTSGITNNK- 671

Query: 386 LLETPILESKRAKV--------VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
              TP+     + V        VS G  ++ +L +DG + + G N +GQLG+G+  DR  
Sbjct: 672 --STPVQVRDSSGVGFMTDVVAVSAGLHYTIILKKDGTLWATGRNNFGQLGVGNKTDRKT 729

Query: 438 PSLVPIHGFLPRNIACGWWHTLL 460
           P  V   G     ++ G+ HTL+
Sbjct: 730 PVKVAFMGTDVAAVSAGYNHTLI 752



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 38/67 (56%)

Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACG 454
           K  K VS G  H+ +L  DG + + G NK GQLG+GD+ DR+ P  V   G     ++ G
Sbjct: 412 KGIKSVSAGYYHTMILKTDGTLWATGENKAGQLGVGDNTDRSTPVQVSSMGSDVAAVSAG 471

Query: 455 WWHTLLL 461
             HT++L
Sbjct: 472 EKHTMIL 478


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 2/174 (1%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGG+H+ +VT  G   ++G    G+ GHG  ++  +P    +L    +E +A G 
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGE 369

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           +H+  +++ G +Y +G   FG LG G + +  VPK +   +LE      ++CG  H+AV+
Sbjct: 370 FHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHTAVV 428

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           T  GQ+ ++G   +G LG GD     IP  V  + G      ACG WHT  + E
Sbjct: 429 TSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 128/299 (42%), Gaps = 47/299 (15%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A GG+H ++++  G+ + WG   EG+LG G     +  P LI  L     E  A
Sbjct: 308 LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN-IQQPKLIDALNTTNIELVA 366

Query: 267 SGKDRPLLVR-QGSVNSSGKAGRS-----------------------YVKEIACGGRHSA 302
            G+     V   G + + GK                           +V  IACG  H+A
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTA 426

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI------ 356
           VVT AG L TFG G +G  GHG       P    SL  ++  + A G+WHT  +      
Sbjct: 427 VVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 486

Query: 357 ------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
                    G+++ +G    G+LG G  + + VP  +   ++E    + V+CG   +  L
Sbjct: 487 SSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCV-AALVEPNFCQ-VACGHSLTVAL 544

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           T  G V + G   YGQLG     D   P+ V   +H      IACG +H  +L   T++
Sbjct: 545 TTSGHVYTMGSPVYGQLG-NSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 40/257 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ +A G  HT +++  GQ++ +G G  G LG G + K V  P  +  L+       
Sbjct: 412 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK-KSVFIPREVDSLK------- 463

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGWGLY 318
                           G   V+  ACG  H+A V +             G L T+G G  
Sbjct: 464 ----------------GLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK 506

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ GHG+   +L P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG    
Sbjct: 507 GRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHA 566

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
             +  P  +E  + +S   + ++CGA H AVLT   +V +WG    G+LG GD  DRN P
Sbjct: 567 DGK-TPNRVEGKLHKS-FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSP 624

Query: 439 SLV-PIHGFLPRNIACG 454
           +LV  +     ++IACG
Sbjct: 625 TLVESLKDKQVKSIACG 641



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 39/228 (17%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEG 242
           GD+     P  V    G++  + A G  HT  + ++            G+++ WG G +G
Sbjct: 448 GDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKG 507

Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
           +LG G++      P L+P    A        LV                 ++ACG   + 
Sbjct: 508 RLGHGNK-----EPKLVPTCVAA--------LVEPNFC------------QVACGHSLTV 542

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +T +G + T G  +YGQ G+   + +        L    VE+IA G +H   ++    V
Sbjct: 543 ALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           Y +G    G+LG G     N P L+E+  L+ K+ K ++CG   +A +
Sbjct: 603 YTWGKGSNGRLGHGDVDDRNSPTLVES--LKDKQVKSIACGTNFTAAV 648


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 125/274 (45%), Gaps = 25/274 (9%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G  +FT  P  V      KI +++ G  HTL LSD G ++ WG G  G LG G       
Sbjct: 164 GPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSY- 222

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           TP  +     A SGK +   V  G V    +A    V   + G +HS   T  G L T+G
Sbjct: 223 TPVRVYLGSEAGSGKKKEN-VGVGKV----RADPVIVTCCSAGAKHSMACTSDGTLWTWG 277

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G  G+ G G     L P+    ++D  +  + AG  H+ CI  +G +Y +G   FG+LG
Sbjct: 278 HGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLG 337

Query: 375 TGVDQAE-NVPKLLE----TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G DQ E  VP+ +E     P+L+      V+CG  H+  LT  G V +WG      LG 
Sbjct: 338 HG-DQGEIPVPRKVEGFGGVPVLQ------VACGTFHTLALTHKGTVFAWGAGL--ALGF 388

Query: 430 GDSIDRN-----IPSLVPIHGFLPRNIACGWWHT 458
           G+  D +     +P  +        NIA G +H+
Sbjct: 389 GEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHS 422



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 153/423 (36%), Gaps = 139/423 (32%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
           C  G   ++A +  G L TWG   + G+  L   +   +P       +  +V   AG +H
Sbjct: 257 CSAGAKHSMACTSDGTLWTWGHGGN-GRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSH 315

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
              +   G +YTWG                +G F +   G Q  +P              
Sbjct: 316 SACIDRQGVLYTWG----------------SGGFGRLGHGDQGEIPV------------- 346

Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
                                      P  V    GV + +VA G  HTL L+  G V+ 
Sbjct: 347 ---------------------------PRKVEGFGGVPVLQVACGTFHTLALTHKGTVFA 379

Query: 236 WGYG-----GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           WG G     GEG+ G G    MV  P  +  +E A                         
Sbjct: 380 WGAGLALGFGEGEDGSGG---MVAVPKHLSDIEAA------------------------- 411

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM------DIQ-- 342
           V  IA G  HSA VT  G LL +G G   + GHG   +Q  P Y + L       D+Q  
Sbjct: 412 VLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSM 471

Query: 343 ------------------------------VEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
                                         ++ +  G  HT+ ++  G V+V+G N  GQ
Sbjct: 472 LGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQ 531

Query: 373 LGTGVDQAENV--PKLLE---TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           LG G D  E+   P  LE   TPI      + ++CG++H   + + G V +WG N  GQL
Sbjct: 532 LGLGEDVEEDQYEPVKLECFSTPI------RRIACGSKHCLAVAQYGDVFAWGANDNGQL 585

Query: 428 GLG 430
           GLG
Sbjct: 586 GLG 588



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 166/436 (38%), Gaps = 82/436 (18%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEA 122
           LA +  G +  WG+    G      G  G    P  L   EA+V+  AAG  H  +VT  
Sbjct: 369 LALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVG 428

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G++  WG      S+++       G  Q     K  A    +   SD ++   V + ++ 
Sbjct: 429 GDLLVWG---VGGSSRLGH-----GDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKRE 480

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
            S  +  + P +            T      +  +  G  HT+ L+  G VW WG   +G
Sbjct: 481 YSDLDVLDVPGTSG----------TNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDG 530

Query: 243 QLGLGSRIKMVP-TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           QLGLG  ++     P  + C                           + ++ IACG +H 
Sbjct: 531 QLGLGEDVEEDQYEPVKLECFS-------------------------TPIRRIACGSKHC 565

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI----- 356
             V   G +  +G    GQ G G       P+  ++L   Q   +  G  ++ CI     
Sbjct: 566 LAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR--QAVDVFCGDDYSACITSLGG 623

Query: 357 --SVEGR-------VYVFGGNQFGQLGTGVDQAEN---VPK--LLETPI-------LESK 395
             SV G        ++ +G  + G+LG G D A      P+  +   P+       LE +
Sbjct: 624 AQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQ 683

Query: 396 RAKVVSC--------GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGF 446
             K V C        G  HS  +T  G+  +WG   YG+LG+G + +   P+      G 
Sbjct: 684 AYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGV 743

Query: 447 LPRNIACGWWHTLLLA 462
             R++A G  H+L L+
Sbjct: 744 RLRSVAAGACHSLALS 759



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 135/326 (41%), Gaps = 80/326 (24%)

Query: 214 ITKVAAGGRHTLILS---DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP------CLEH 264
           + +VA G  HTL++    D  Q++GWG      LG+G  I+    P L+P        E 
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107

Query: 265 AASGKDRPLLVRQ-----GSVNSSGKAGRSY----------------------------- 290
           +    +  +LV++     G V + G   R                               
Sbjct: 108 SCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSW 167

Query: 291 ---------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP--- 332
                          +  I+CG  H+  ++D GAL  +G G YG  G G T+D   P   
Sbjct: 168 FTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRV 227

Query: 333 ---SYASS--------LMDIQVEQI-----AAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
              S A S        +  ++ + +     +AG  H++  + +G ++ +G    G+LG G
Sbjct: 228 YLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLG 287

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            ++    P +++  IL+ +    V+ G  HSA +   G + +WG   +G+LG GD  +  
Sbjct: 288 HNRGSLSPAVVDY-ILD-RDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP 345

Query: 437 IPSLVPIHGFLP-RNIACGWWHTLLL 461
           +P  V   G +P   +ACG +HTL L
Sbjct: 346 VPRKVEGFGGVPVLQVACGTFHTLAL 371



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 157/387 (40%), Gaps = 75/387 (19%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAAGWAHCVSVTEA 122
           +A + +G +  WGS DD GQ  L      +  EP  L   ++ + + A G  HC++V + 
Sbjct: 513 IALTGAGAVWVWGSNDD-GQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCLAVAQY 571

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G+V+ WG            D G  G      + + +A+                      
Sbjct: 572 GDVFAWG----------ANDNGQLGLGVVRPSFEPAAV---------------------- 599

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
            +A  ++ +   GD++   S C+ +L     ++            ++ G +W WG    G
Sbjct: 600 -TALRQAVDVFCGDDY---SACITSLGGAQSVSGETG--------TEFGDLWAWGAAESG 647

Query: 243 QLGLGSRIKM--VPTPHLI----PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           +LGLG  +    + TP  +    P    +    +     R   V+ S          +  
Sbjct: 648 KLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFS---------PLCS 698

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G  HS  +T  G    +G G YG+ G G+T +   P+       +++  +AAG  H++ +
Sbjct: 699 GTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLAL 758

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK----RAKVVSCGARHSAVLTE 412
           S++G ++ +G  +     T        P++     LE +    + K +S   RHS  +TE
Sbjct: 759 SMDGDLWFWGRRE----DTCSTTNYMSPRIFMQ--LEGQGGVPKVKSISASERHSLAVTE 812

Query: 413 DGQVLSWGWNKYGQLGLG----DSIDR 435
            G+V +WG NK  Q G G    + +DR
Sbjct: 813 AGEVFAWGDNKLYQTGCGKRQAERLDR 839



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 36/224 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           V  + + +G  H+L ++  G+ + WG G  G+LG+G+      TP    C        D 
Sbjct: 691 VSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAY-TP--TRC--------DF 739

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY-GQCGHGSTNDQL 330
           P  VR              ++ +A G  HS  ++  G L  + WG     C   ST + +
Sbjct: 740 PKGVR--------------LRSVAAGACHSLALSMDGDL--WFWGRREDTC---STTNYM 780

Query: 331 RPSYASSLMDI----QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
            P     L       +V+ I+A   H++ ++  G V+ +G N+  Q G G  QAE + + 
Sbjct: 781 SPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRP 840

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
                L S   + V+ G + S  +   G+V + G  K G+LG G
Sbjct: 841 ERVAGLPSA-CQWVATGPQGSFFILASGEVFAAGVIKSGRLGTG 883


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 118/255 (46%), Gaps = 28/255 (10%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  V+ G  H+L +   G+V+ WG G +GQLG+    K+   P  I  L           
Sbjct: 91  IVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDEL----------- 139

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRP 332
                   SS K     + +++CG  HS  +   G + ++G   +GQ G G +   Q  P
Sbjct: 140 --------SSFK-----IIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASP 186

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG--VDQAENVPKLLETP 390
            +  SL  I + Q+AAG  H+  +S  G  Y +G N  GQL      + AE + K     
Sbjct: 187 QWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIG 246

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN 450
            L+  +   +SCG  H+AVLT+DG+V ++G N  GQLG         P +V         
Sbjct: 247 ELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGPQVVD-SAVSFSQ 305

Query: 451 IACGWWHTLLLAETT 465
           IACG +HTL  + TT
Sbjct: 306 IACGSYHTLAYSCTT 320



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 98/207 (47%), Gaps = 28/207 (13%)

Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
           + WG    GQLG             IP +  A   K R +  R+G+       G   + +
Sbjct: 3   YCWGDNSSGQLG-------------IPAVPRA---KARAVRCRRGA-----SLGNQTLLQ 41

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
            ACG RHS ++   G + + G    GQ G        RP+   +L    +  ++ G  H+
Sbjct: 42  AACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHS 101

Query: 354 VCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           + I  EGRV+ +G    GQLG     +  ++PK ++   L S +   VSCG  HS  L +
Sbjct: 102 LAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDE--LSSFKIIQVSCGHYHSIALAQ 159

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPS 439
           DG+V SWG N +GQLGLG+    N+PS
Sbjct: 160 DGRVFSWGKNNHGQLGLGE----NVPS 182



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 42/247 (17%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
            KI +V+ G  H++ L+  G+V+ WG    GQLGLG  +    +P  +  L+        
Sbjct: 142 FKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGI------ 195

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQC---GHGST 326
           PL                   ++A GG HS  ++ +G   ++GWG    GQ    G   +
Sbjct: 196 PL------------------AQVAAGGAHSFALSFSGT--SYGWGRNNAGQLALSGKKES 235

Query: 327 NDQL-RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
            +Q+ +P     L  +QV  I+ G  HT  ++ +G+V+ FG N  GQLG  +      P+
Sbjct: 236 AEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGPQ 295

Query: 386 LLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWGW----NKYGQLGLGDSI-DRNIPS 439
           ++++ +  S+    ++CG+ H+ A     GQV+S+G     +  G L  GD++ + NI +
Sbjct: 296 VVDSAVSFSQ----IACGSYHTLAYSCTTGQVISFGCGSQRDPIGPLQPGDAVQNFNISN 351

Query: 440 LVPIHGF 446
           L+  + F
Sbjct: 352 LISSNDF 358


>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 117/261 (44%), Gaps = 43/261 (16%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL---SDMGQVWGWGYGGEGQLGLGSRIK 251
           GD      P  V       + K+A G RH+L L   S   QV+G+G G  GQLG+  +I+
Sbjct: 351 GDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGAGKRGQLGISKKIQ 410

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
            V  P L   LE A                         +  IA GG HSA ++  G L 
Sbjct: 411 TVNLPILSSNLEAAE------------------------IVGIAAGGDHSAALSAEGHLY 446

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
           T+G G        ST+D   P +  S       ++A G  H + ++ EG +Y+ GG   G
Sbjct: 447 TWGRGFK------STSDVYSPQHLPSPSSFS--KVALGWNHALVLTDEGELYMLGGKHHG 498

Query: 372 QLGTG--VDQAENVP------KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
            L     ++  +++P           P L   +   ++ GA HS ++TEDG V +WGW +
Sbjct: 499 ALSDSEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIAAGAEHSVIVTEDGGVKTWGWGE 558

Query: 424 YGQLGLGDSIDRNIPSLVPIH 444
           +GQLGLGD+ D   P  V ++
Sbjct: 559 HGQLGLGDTCDHTNPQTVNLN 579



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 108/250 (43%), Gaps = 32/250 (12%)

Query: 199 FTLSPCLVTL----NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           F L P L  L        K T    G R  ++     ++W WG G + QLG G R++   
Sbjct: 192 FDLCPLLYELLQEYRASSKETMSMVGLREVVVDDVEQELWSWGAGTDAQLGTG-RLE--- 247

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                          + P LVR  S++S+       +  ++CGG H   +T  G +LT+G
Sbjct: 248 -------------DNNLPQLVRTPSLSSA-----PAISFLSCGGAHVIALTAGGGVLTWG 289

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G  GQ G G     L P     L    +  ++AG  H+  +S EG++Y  G   FGQLG
Sbjct: 290 RGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLG 349

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG---QVLSWGWNKYGQLGLGD 431
            G  Q    P+  E      K    ++CG RHS  L +     QV  +G  K GQLG+  
Sbjct: 350 HGDYQLRCFPE--EVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGAGKRGQLGISK 407

Query: 432 SIDR-NIPSL 440
            I   N+P L
Sbjct: 408 KIQTVNLPIL 417



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA-KVVSCGARHS 407
           GL   V   VE  ++ +G     QLGTG  +  N+P+L+ TP L S  A   +SCG  H 
Sbjct: 217 GLREVVVDDVEQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHV 276

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAETTQ 466
             LT  G VL+WG    GQLGLGD I    P  ++ +  +   +++ GW H+  +++  +
Sbjct: 277 IALTAGGGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHSGFVSDEGK 336

Query: 467 I 467
           +
Sbjct: 337 L 337



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 55/183 (30%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
           A S  G L TWG    +  S + S +H        LP+ +S  K A GW H + +T+ GE
Sbjct: 438 ALSAEGHLYTWGRGF-KSTSDVYSPQH--------LPSPSSFSKVALGWNHALVLTDEGE 488

Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
           +Y  G +                     +      L + ++ P D R             
Sbjct: 489 LYMLGGK------------------HHGALSDSEMLNSMKSLPGDSR------------- 517

Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
                      ++ F   P L     G+K+  +AAG  H++I+++ G V  WG+G  GQL
Sbjct: 518 -----------EDNFQAVPAL----SGIKVLDIAAGAEHSVIVTEDGGVKTWGWGEHGQL 562

Query: 245 GLG 247
           GLG
Sbjct: 563 GLG 565



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 16/186 (8%)

Query: 288 RSYVKE-IACGGRHSAVVTDA-GALLTFGWGLYGQCGHGSTNDQLRPSYAS--SLMDI-Q 342
           R+  KE ++  G    VV D    L ++G G   Q G G   D   P      SL     
Sbjct: 206 RASSKETMSMVGLREVVVDDVEQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPA 265

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE--SKRAKVV 400
           +  ++ G  H + ++  G V  +G    GQLG G    + +  L   P++   S     V
Sbjct: 266 ISFLSCGGAHVIALTAGGGVLTWGRGNSGQLGLG----DMISSLHPKPVMRLGSYFITHV 321

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWH 457
           S G  HS  ++++G++ + G   +GQLG GD   R  P  V    F  ++   IACG  H
Sbjct: 322 SAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYQLRCFPEEVLF--FSDKHVDKIACGMRH 379

Query: 458 TLLLAE 463
           +L L +
Sbjct: 380 SLALVK 385


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 173/426 (40%), Gaps = 43/426 (10%)

Query: 41  PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFP 99
           P PA++ G     ++  G    +LA    G + TWG   D     L +G     P  P  
Sbjct: 491 PSPAQVPGVAGATEIAAG-TYHSLALRSDGTVWTWG---DNSYGQLGAGATPRGPRAPAV 546

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           +P  A +   AAG  H +++  +G+V+ WG         V    G   +  ++  G+ S 
Sbjct: 547 VPGLAVITHVAAGLFHSLALDSSGQVWAWG-------DNVYGQLGDGSTTSRNVPGRVSG 599

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
           LP          +    +    +     E+ N   GD   T  P    ++    +  ++ 
Sbjct: 600 LPAGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTTARPVPARVSLPATLVALST 659

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR 276
            G HT+ L   G +W WG    GQLG G+ +    TP  +P        ASG      +R
Sbjct: 660 RGSHTVALDTTGMLWAWGRNVSGQLGNGTLVSE-STPRRVPSFARVQGFASGLRTTFALR 718

Query: 277 -QGSV-----NSSGKAGRSYVKE---------------IACGGRHSAVVTDAGALLTFGW 315
             G+V     NS G+ G                     +A G +H   V+  G++ +FG 
Sbjct: 719 ADGTVWAWGDNSLGQLGNGATSASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGS 778

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
              GQ G+  +  Q  P + +    I  E +AAG   ++ +S +G V+ +G N  GQLG 
Sbjct: 779 NSRGQLGYEGSATQTSPRWLTGPECI--EAVAAGALFSLALSCDGGVWAWGDNGSGQLGD 836

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           G   A   P     P L    A  ++ G+ H+  +  DG V +WG N  GQLG G +  R
Sbjct: 837 GAVTARTAPA--RVPGLAHVVA--IAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSR 892

Query: 436 NIPSLV 441
            +P  V
Sbjct: 893 AVPMQV 898



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 166/430 (38%), Gaps = 88/430 (20%)

Query: 42  IPARLCG-GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           +P R+ G  D+    CG    F+L        + WG+    G   L +G       P  +
Sbjct: 341 VPVRVSGVSDAQALACG--NAFSLVGRGDNVTLGWGA---NGSGQLGNGSSSVRALPGRV 395

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
           P+  +    AAG  H       G V+ WG                      D+T  Q   
Sbjct: 396 PSLTAGASLAAGDHHVFLRQADGSVWAWG----------------------DNTYGQLGD 433

Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSA-------REESENPASGDEFFTL----------SP 203
            T  + P+  R    +   R  S++       R +    A GD  +            SP
Sbjct: 434 GTLVSRPAPVRLSSTLTSVRALSASSYHSLALRSDGTVWAWGDNAYGQLGDTSGGRRPSP 493

Query: 204 CLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
             V   PGV   T++AAG  H+L L   G VW WG    GQLG G+  +    P ++P L
Sbjct: 494 AQV---PGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPGL 550

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                     + +  +A G  HS  +  +G +  +G  +YGQ G
Sbjct: 551 --------------------------AVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLG 584

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
            GST  +  P   S L    ++ I AG  ++V +  +G V+ +G N  GQLG G   A  
Sbjct: 585 DGSTTSRNVPGRVSGL-PAGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTTARP 643

Query: 383 VPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLG----DSIDRN 436
           VP  +  P      A +V+   R  H+  L   G + +WG N  GQLG G    +S  R 
Sbjct: 644 VPARVSLP------ATLVALSTRGSHTVALDTTGMLWAWGRNVSGQLGNGTLVSESTPRR 697

Query: 437 IPSLVPIHGF 446
           +PS   + GF
Sbjct: 698 VPSFARVQGF 707



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 193/486 (39%), Gaps = 63/486 (12%)

Query: 11  NEKMEECKETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSES 69
           N  +       V+ WG    G   E S +    P ++ G      V  G    ++A  E 
Sbjct: 58  NHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTGVTAVAAGNT-HSMALREE 116

Query: 70  GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVSVTEAGEV 125
           G + TWG+  D        G+ G+      +P + +    V   AAG  H +++   G V
Sbjct: 117 GTVWTWGTNTD--------GQLGDGVSQRSVPAQVAGLTGVTAIAAGNLHSLALIN-GAV 167

Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
           + WG          T   G   S  + +  K + L TE    +        +KR  T  A
Sbjct: 168 WAWG-------NNTTGQLGDGSSTSRSTPAKVAGL-TEVVAIAAGDFHSLALKRDGTVWA 219

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM---GQVWGWGYGGEG 242
              + +   GD         V ++    I  +A GG H++  S     G+VW WG    G
Sbjct: 220 WGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAWGDNTYG 279

Query: 243 QLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR------------QGSVNSSGKA- 286
           QLG G  +  +  P  +P L      ASG    L +R            Q     +G + 
Sbjct: 280 QLGNGGDVSSL-LPLEVPGLTQVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTGTSV 338

Query: 287 --------GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLRPSYAS 336
                   G S  + +ACG   S V    G  +T GWG  G  Q G+GS++ +  P    
Sbjct: 339 QRVPVRVSGVSDAQALACGNAFSLV--GRGDNVTLGWGANGSGQLGNGSSSVRALPGRVP 396

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
           SL       +AAG  H      +G V+ +G N +GQLG G   +   P  L +  L S R
Sbjct: 397 SLT--AGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVSRPAPVRLSS-TLTSVR 453

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW 455
           A  +S  + HS  L  DG V +WG N YGQLG      R  P+ VP + G     IA G 
Sbjct: 454 A--LSASSYHSLALRSDGTVWAWGDNAYGQLGDTSGGRRPSPAQVPGVAG--ATEIAAGT 509

Query: 456 WHTLLL 461
           +H+L L
Sbjct: 510 YHSLAL 515



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 166/412 (40%), Gaps = 66/412 (16%)

Query: 43  PARLCGGDSWKDVCGGGCGFALATSES--GKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
           P R+ G      + GGG     A+S +  GK+  WG   D     L +G    +  P  +
Sbjct: 239 PVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAWG---DNTYGQLGNGGDVSSLLPLEV 295

Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
           P    VV  A+G +H +++     V+ WG            D   A + Q  ++ ++  +
Sbjct: 296 PGLTQVVALASGTSHSLALRGDDSVWAWG------------DNAQAQTAQTGTSVQR--V 341

Query: 161 PTEQAPPSDKRA-----GEEVVKRRKTSS---AREESENPASGDEFFTLSPCLV-TLNPG 211
           P   +  SD +A        +V R    +       S    +G       P  V +L  G
Sbjct: 342 PVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRVPSLTAG 401

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
             +   AAG  H  +    G VW WG    GQLG G+ +                    R
Sbjct: 402 ASL---AAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVS-------------------R 439

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
           P  VR  S  +S       V+ ++    HS  +   G +  +G   YGQ G   T+   R
Sbjct: 440 PAPVRLSSTLTS-------VRALSASSYHSLALRSDGTVWAWGDNAYGQLGD--TSGGRR 490

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           PS A         +IAAG +H++ +  +G V+ +G N +GQLG G       P+    P 
Sbjct: 491 PSPAQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGA-----TPRGPRAPA 545

Query: 392 LESKRAKV--VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           +    A +  V+ G  HS  L   GQV +WG N YGQLG G +  RN+P  V
Sbjct: 546 VVPGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPGRV 597



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 128/273 (46%), Gaps = 35/273 (12%)

Query: 214  ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKD 270
            I  VAAG   +L LS  G VW WG  G GQLG G+ +     P  +P L H    A+G D
Sbjct: 804  IEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGA-VTARTAPARVPGLAHVVAIAAGSD 862

Query: 271  RPLLVR-QGSV-----NSSGKAGRS---------YVKE------IACGGRHSAVVTDAGA 309
              L VR  G+V     N SG+ G            VKE      +A G  HS  V   G 
Sbjct: 863  HALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVDVVAVAGGSGHSLAVRADGT 922

Query: 310  LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
            +  +G    GQ G G+T  +  P + S+L  +Q   IA+G  H++ ++  G V+ +G N 
Sbjct: 923  VWAWGANGSGQLGDGTTTSRTLPVFVSTLSGVQA--IASGAQHSLALAEGGVVWAWGANG 980

Query: 370  FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
             GQLG G   +   P  ++   L   +  V   GA  S  LT  G+V SWG N  GQLG 
Sbjct: 981  SGQLGDGTTTSRTRP--VQVSGLSGVQGLV--AGASFSLALTP-GKVWSWGNNSAGQLGD 1035

Query: 430  GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
            G    R+ P   P +  F+   ++ G  HT++L
Sbjct: 1036 GTLNSRSQPGAGPTLSSFVA--LSAGAQHTVVL 1066



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 125/254 (49%), Gaps = 36/254 (14%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHL-IPCLEHAASGKDRPL 273
           ++AAG  H+L ++  G VW WG   +GQLG GS ++   PT  + +  +   A+G    +
Sbjct: 52  RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTGVTAVAAGNTHSM 111

Query: 274 LVR-QGSV-----NSSGK--------------AGRSYVKEIACGGRHSAVVTDAGALLTF 313
            +R +G+V     N+ G+              AG + V  IA G  HS  + + GA+  +
Sbjct: 112 ALREEGTVWTWGTNTDGQLGDGVSQRSVPAQVAGLTGVTAIAAGNLHSLALIN-GAVWAW 170

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           G    GQ G GS+  +  P+  + L   +V  IAAG +H++ +  +G V+ +GGN  GQL
Sbjct: 171 GNNTTGQLGDGSSTSRSTPAKVAGL--TEVVAIAAGDFHSLALKRDGTVWAWGGNYSGQL 228

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSC--GARHSAV---LTEDGQVLSWGWNKYGQLG 428
           G G   + +      TP+  S    +V+   G  HS      T  G+V +WG N YGQLG
Sbjct: 229 GDGTLDSRS------TPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLG 282

Query: 429 LGDSIDRNIPSLVP 442
            G  +   +P  VP
Sbjct: 283 NGGDVSSLLPLEVP 296



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 173/443 (39%), Gaps = 93/443 (20%)

Query: 22  VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
           V+ WG    G   + + +  P P RL    +           +LA    G +  WG  + 
Sbjct: 420 VWAWGDNTYGQLGDGTLVSRPAPVRLSSTLTSVRALSASSYHSLALRSDGTVWAWGD-NA 478

Query: 81  EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
            GQ   TSG  G  P P  +P  A   + AAG  H +++   G V+TWG           
Sbjct: 479 YGQLGDTSG--GRRPSPAQVPGVAGATEIAAGTYHSLALRSDGTVWTWG----------- 525

Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
                      +S G+  A  T + P    RA                            
Sbjct: 526 ----------DNSYGQLGAGATPRGP----RA---------------------------- 543

Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP--TP 256
             P +V   PG+  IT VAAG  H+L L   GQVW WG    GQLG GS   + VP    
Sbjct: 544 --PAVV---PGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPGRVS 598

Query: 257 HLIPCLEHAASGKDRPL-LVRQGSV-----NSSGKAGR---------------SYVKEIA 295
            L   ++   +G    + L   GSV     NS+G+ G                + +  ++
Sbjct: 599 GLPAGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTTARPVPARVSLPATLVALS 658

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
             G H+  +   G L  +G  + GQ G+G+   +  P    S    +V+  A+GL  T  
Sbjct: 659 TRGSHTVALDTTGMLWAWGRNVSGQLGNGTLVSESTPRRVPSFA--RVQGFASGLRTTFA 716

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           +  +G V+ +G N  GQLG G   A  VP       +   R   ++ GA+H   ++ DG 
Sbjct: 717 LRADGTVWAWGDNSLGQLGNGATSASPVP----VQAVGYPRTVPLASGAQHVLAVSSDGS 772

Query: 416 VLSWGWNKYGQLGLGDSIDRNIP 438
           V S+G N  GQLG   S  +  P
Sbjct: 773 VFSFGSNSRGQLGYEGSATQTSP 795



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 109/236 (46%), Gaps = 33/236 (13%)

Query: 210  PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---SRIKMVPTPHLIPCLEHA 265
            PG+  +  +AAG  H L +   G VW WG  G GQLG G   SR   +    L+  +   
Sbjct: 849  PGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVDVVA-V 907

Query: 266  ASGKDRPLLVR-QGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVV 304
            A G    L VR  G+V     N SG+ G                S V+ IA G +HS  +
Sbjct: 908  AGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPVFVSTLSGVQAIASGAQHSLAL 967

Query: 305  TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
             + G +  +G    GQ G G+T  + RP   S L  +Q   + AG   ++ ++  G+V+ 
Sbjct: 968  AEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQ--GLVAGASFSLALT-PGKVWS 1024

Query: 365  FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
            +G N  GQLG G   + + P     P L S  A  +S GA+H+ VL  D   LSWG
Sbjct: 1025 WGNNSAGQLGDGTLNSRSQPG--AGPTLSSFVA--LSAGAQHTVVLRSDDSFLSWG 1076



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 121/317 (38%), Gaps = 59/317 (18%)

Query: 59   GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
            G  F+LA S  G +  WG   D G   L  G       P  +P  A VV  AAG  H ++
Sbjct: 810  GALFSLALSCDGGVWAWG---DNGSGQLGDGAVTARTAPARVPGLAHVVAIAAGSDHALA 866

Query: 119  VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ-KDSTGKQSALPTEQAPPSDKRA----- 172
            V   G V+ WG               + GS Q  D T    A+P +     D  A     
Sbjct: 867  VRADGTVWAWG---------------ANGSGQLGDGTTTSRAVPMQVKELVDVVAVAGGS 911

Query: 173  GEEVVKRRKTSS---AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
            G  +  R   +        S     G       P  V+   GV+   +A+G +H+L L++
Sbjct: 912  GHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPVFVSTLSGVQ--AIASGAQHSLALAE 969

Query: 230  MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
             G VW WG  G GQLG G+                    + RP+ V          +G S
Sbjct: 970  GGVVWAWGANGSGQLGDGTTTS-----------------RTRPVQV----------SGLS 1002

Query: 290  YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
             V+ +  G   S  +T  G + ++G    GQ G G+ N + +P    +L       ++AG
Sbjct: 1003 GVQGLVAGASFSLALTP-GKVWSWGNNSAGQLGDGTLNSRSQPGAGPTLSSFVA--LSAG 1059

Query: 350  LWHTVCISVEGRVYVFG 366
              HTV +  +     +G
Sbjct: 1060 AQHTVVLRSDDSFLSWG 1076


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 132/277 (47%), Gaps = 33/277 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
           + + A G  HTL+L+  G+++  G    GQLG  +       P  I  LE     H + G
Sbjct: 38  VQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCG 97

Query: 269 KDRPL-LVRQGSV-----NSSGKAG-----RSY-------------VKEIACGGRHSAVV 304
               L L   G V     NS G+ G     ++Y             V +IA G  HS  +
Sbjct: 98  TTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLAL 157

Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQ-LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
           T++G L ++G   YGQ G G+T ++ + P+   SL  I +  IA G  H+  +S  G ++
Sbjct: 158 TNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIF 217

Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
            +G N FGQLG     +   P+ L+T  L +   + +SCG   SA LT++G V + G   
Sbjct: 218 GWGKNTFGQLGLNDLVSRCFPQQLKT--LRNLGVRYISCGDDFSAFLTQEGGVFTCGAGT 275

Query: 424 YGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
           +GQLG G   +  +P +V  + G     IACG  HTL
Sbjct: 276 FGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTL 312



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 104/185 (56%), Gaps = 10/185 (5%)

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL---RPSYASSLMDIQVEQ 345
           S V++ ACG  H+ ++T  G L + G   +GQ GH +  D L   RP + SSL +  V  
Sbjct: 36  SSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDT--DCLPNKRPQFISSLENYIVTH 93

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGA 404
           ++ G  H++ ++  G+V+ +G N  GQLG   D Q    P++++T  + +K    ++ G 
Sbjct: 94  VSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKT--IATKTVVQIASGQ 151

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVPIHGFLP-RNIACGWWHTLLLA 462
            HS  LT  G++ SWG N YGQLGLG + ++ + P+LV     +P   IACG  H+  ++
Sbjct: 152 FHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVS 211

Query: 463 ETTQI 467
           ++  I
Sbjct: 212 KSGAI 216



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 34/214 (15%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P ++       + ++A+G  H+L L++ G+++ WG  G GQLGLG+  + V TP L+  
Sbjct: 132 TPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKS 191

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYG 319
           L                       AG   +  IACGG HS  V+ +GA+  FGWG   +G
Sbjct: 192 L-----------------------AGIP-IAFIACGGNHSFAVSKSGAI--FGWGKNTFG 225

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           Q G      +  P    +L ++ V  I+ G   +  ++ EG V+  G   FGQLG G   
Sbjct: 226 QLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCS 285

Query: 380 AENVPKLLETPILESKRAKV--VSCGARHSAVLT 411
            E +P++    + E   +K+  ++CG RH+    
Sbjct: 286 NEILPRM----VFELMGSKITQIACGRRHTLAFV 315



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 132/349 (37%), Gaps = 65/349 (18%)

Query: 34  EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
           E   +L P     C   S +     G    L  ++ GKL + G+ D     + T     +
Sbjct: 20  EDEQVLLPREMDWCHSSSVQQ-AACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLPNK 78

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
            P+         V   + G  H +++T  G+V++WG               S G      
Sbjct: 79  RPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGS-------------NSIGQL---- 121

Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT------------- 200
            G  + L T   P   K    + V   + +S +  S    +  E F+             
Sbjct: 122 -GHDTDLQTYTTPRMIKTIATKTVV--QIASGQFHSLALTNSGELFSWGANGYGQLGLGT 178

Query: 201 -----LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
                ++P LV    G+ I  +A GG H+  +S  G ++GWG    GQLGL   +     
Sbjct: 179 TGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRC-F 237

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
           P  +  L +                          V+ I+CG   SA +T  G + T G 
Sbjct: 238 PQQLKTLRNLG------------------------VRYISCGDDFSAFLTQEGGVFTCGA 273

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVY 363
           G +GQ GHG+ ++++ P     LM  ++ QIA G  HT+  +   G++Y
Sbjct: 274 GTFGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 9/163 (5%)

Query: 312 TFGWG--LYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
            + WG  ++G+ G G   D+  L P          V+Q A G  HT+ ++ +G+++  G 
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62

Query: 368 NQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
           N  GQLG   D   N  P+ + +  LE+     VSCG  HS  LT  GQV SWG N  GQ
Sbjct: 63  NDHGQLGHDTDCLPNKRPQFISS--LENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQ 120

Query: 427 LGLGDSID-RNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
           LG    +     P ++  I       IA G +H+L L  + ++
Sbjct: 121 LGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGEL 163


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 94/179 (52%), Gaps = 4/179 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++IACG RH A+ T  G +  +G  L G+ GHG+  D  RP    +L    VE IA G 
Sbjct: 257 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGE 316

Query: 351 WHTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  ++  G +Y +G   +  G LG G   +  +PK +  P LE  +   VSCG+ HSA
Sbjct: 317 FHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGP-LEGVQVLSVSCGSWHSA 375

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQ 466
           + T  G+V ++G   +G LG G       P  V  + GF    +ACG WH+  + E++ 
Sbjct: 376 LTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAIVESSN 434



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 122/268 (45%), Gaps = 43/268 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + + ++A G RH  + +  G+V+ WG    G+LG G+   +                  R
Sbjct: 255 LDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADI-----------------SR 297

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQ 329
           P LV   +V        S V+ IACG  H+  VT +G L T+G G Y  G  G+G+    
Sbjct: 298 PKLVEALAV--------SNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASH 349

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P   S  ++ +QV  ++ G WH+   +  G+V+ FG   FG LG G  +    PK +E
Sbjct: 350 WLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVE 409

Query: 389 TPILESKRAKVVSCGARHSAVLTEDG----------QVLSWGWNKYGQLGLGDSIDRNIP 438
              L   R   V+CG  HSA + E            ++ +WG     QLG GD   R +P
Sbjct: 410 A--LSGFRTMKVACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVP 467

Query: 439 SLV-PIHGFLPRNIACGWWHTLLLAETT 465
           + V  +  +    +ACG  H++ +A +T
Sbjct: 468 TCVQSLIDYSFHQVACG--HSMTIALST 493



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 115/256 (44%), Gaps = 40/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           GV++  V+ G  H+ + +  G+V+ +G G  G LG G R + V  P  +  L    + K 
Sbjct: 361 GVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGKR-ETVGYPKEVEALSGFRTMK- 418

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG----------ALLTFGWGLYGQ 320
                                  +ACG  HSA + ++            L T+G G   Q
Sbjct: 419 -----------------------VACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQ 455

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT-GVDQ 379
            GHG  + +L P+   SL+D    Q+A G   T+ +S  G V+  G +  GQLG    D 
Sbjct: 456 LGHGDKDSRLVPTCVQSLIDYSFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDG 515

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
            + +P       L  +  + +SCG+ H AVLT   +V +WG    G+LG G   D+  P+
Sbjct: 516 KQPIPV---QDRLSGELVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPT 572

Query: 440 LV-PIHGFLPRNIACG 454
           LV  +     ++IACG
Sbjct: 573 LVEALKDRHVKSIACG 588



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 116/278 (41%), Gaps = 39/278 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW--GYGGEGQLGLGSRIKMVPTPHLIP 260
           P LV       +  +A G  HT  ++  G ++ W  GY   G LG G+        H +P
Sbjct: 298 PKLVEALAVSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGA-----GASHWLP 352

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                 SG   PL   Q             V  ++CG  HSA+ T +G + TFG G +G 
Sbjct: 353 ---KRVSG---PLEGVQ-------------VLSVSCGSWHSALTTSSGKVFTFGDGTFGA 393

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI----------SVEGRVYVFGGNQF 370
            GHG       P    +L   +  ++A GLWH+  I           +  ++Y +G    
Sbjct: 394 LGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAIVESSNHVSINVISRKLYTWGAGDK 453

Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
            QLG G   +  VP  +++ I  S     V+CG   +  L+  G V + G +  GQLG  
Sbjct: 454 NQLGHGDKDSRLVPTCVQSLIDYSFHQ--VACGHSMTIALSTSGHVFTMGSSSNGQLGNP 511

Query: 431 DSIDRN-IPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
            S  +  IP    + G L   I+CG  H  +L   +++
Sbjct: 512 KSDGKQPIPVQDRLSGELVEEISCGSCHVAVLTSRSEV 549



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 12/154 (7%)

Query: 324 GSTN------DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           GSTN      D L P    S + + V+QIA G  H    + +G V+ +G    G+LG G 
Sbjct: 232 GSTNYLCSKADILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGT 291

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDR 435
           D   + PKL+E   L     + ++CG  H+  +T  G + +WG   Y  G LG G     
Sbjct: 292 DADISRPKLVEA--LAVSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASH 349

Query: 436 NIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
            +P  V  P+ G    +++CG WH+ L   + ++
Sbjct: 350 WLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKV 383



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 118/323 (36%), Gaps = 55/323 (17%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGE-------TPEPFPLPTE-ASVVKAAAGWAHC 116
           A + SG L TWG        Y   G  G         P+    P E   V+  + G  H 
Sbjct: 321 AVTASGDLYTWGDG------YYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHS 374

Query: 117 VSVTEAGEVYTWG----------WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
              T +G+V+T+G           RE V   K         + +       SA   E   
Sbjct: 375 ALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAIVE--- 431

Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
            S       V+ R+  +    +      GD+   L P  V         +VA G   T+ 
Sbjct: 432 -SSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSFHQVACGHSMTIA 490

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
           LS  G V+  G    GQLG        P P     ++   SG+                 
Sbjct: 491 LSTSGHVFTMGSSSNGQLGNPKSDGKQPIP-----VQDRLSGE----------------- 528

Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
               V+EI+CG  H AV+T    + T+G G  G+ GHG   D+ +P+   +L D  V+ I
Sbjct: 529 ---LVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSI 585

Query: 347 AAGLWHTVCISVEGRVYVFGGNQ 369
           A G   T CI +    +V G +Q
Sbjct: 586 ACGSNFTTCICIHK--WVSGADQ 606


>gi|358335048|dbj|GAA31002.2| E3 ubiquitin-protein ligase HERC4 [Clonorchis sinensis]
          Length = 1185

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 172/455 (37%), Gaps = 156/455 (34%)

Query: 72  LITWGSADDEGQ-SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
           L  WG+ DD     +    +   +P+P  +P   ++   A G+ H + +   GEVY+ G 
Sbjct: 9   LFGWGACDDNQLGPHEQDSQQISSPQPITVPNPWTIAHVACGYKHTLFLNADGEVYSCGG 68

Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
            E          FG  G  + DS             PSD R                   
Sbjct: 69  NE----------FGQLG--RSDS-------------PSDFRR------------------ 85

Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
                          +T      IT +A G  H   +S  G+++ WG    GQLG     
Sbjct: 86  ---------------ITALENHTITDIACGAYHNAAISYTGRLFTWGCNSNGQLG----- 125

Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY----VKEIACGGRHSAVVTD 306
                                    R+G  +SS K  RS     V +++ G  HS V+TD
Sbjct: 126 -------------------------REGD-DSSVKMIRSLAEHRVVQVSLGLEHSLVLTD 159

Query: 307 AGALLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
              L  FG  ++GQ G G  +D   + P     L  + +  I+AG  H+  +++ G +YV
Sbjct: 160 TSRLFVFGSNIWGQLGLGFRSDLPIVIPQQLMCLAGLPIRCISAGGVHSAVLTISGTLYV 219

Query: 365 FGGNQFGQLG----------------TGVDQA---------------------------- 380
           +GGN++GQLG                + ++ A                            
Sbjct: 220 WGGNKYGQLGLEPIETVAAETVSGSRSSIENAPVWCGNKYGQLGLEPIETVAAETVSGSR 279

Query: 381 ---ENVPKL-LETPI----LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD- 431
              EN P+  +  P     L+ +RA  V CG  H+ VLTE+G V ++G N++GQLG G+ 
Sbjct: 280 SSIENAPQHSVSVPTAVRSLKGQRAVFVDCGESHTVVLTEEGGVFTYGGNQFGQLGHGES 339

Query: 432 ----SIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
               SI R +  L+         +ACG  HTL+L 
Sbjct: 340 SKSVSIPRKVADLMDNPT---TQVACGRMHTLVLV 371



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 33/212 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL------------GSR--IKMVPT- 255
           G+ I  ++AGG H+ +L+  G ++ WG    GQLGL            GSR  I+  P  
Sbjct: 195 GLPIRCISAGGVHSAVLTISGTLYVWGGNKYGQLGLEPIETVAAETVSGSRSSIENAPVW 254

Query: 256 -----------PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE----IACGGRH 300
                      P      E  +  +       Q SV S   A RS   +    + CG  H
Sbjct: 255 CGNKYGQLGLEPIETVAAETVSGSRSSIENAPQHSV-SVPTAVRSLKGQRAVFVDCGESH 313

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHT-VCISV 358
           + V+T+ G + T+G   +GQ GHG ++  +  P   + LMD    Q+A G  HT V +  
Sbjct: 314 TVVLTEEGGVFTYGGNQFGQLGHGESSKSVSIPRKVADLMDNPTTQVACGRMHTLVLVPS 373

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            G VY FG    GQLGT  +   + P L++ P
Sbjct: 374 LGCVYAFGAGSEGQLGTNTNTDSSRPTLVKGP 405


>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
          Length = 1698

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 138/300 (46%), Gaps = 45/300 (15%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P  V +  G +   VA G  HTL+ +  G++   G   +GQLGLG     +    L P  
Sbjct: 77  PVCVKVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFC 136

Query: 263 EHA------ASGKDRPLLVRQGSV-----NSSGKAG---RSYV---KE---------IAC 296
           ++A      A       L   G +     NS+G+ G    S+    KE         ++C
Sbjct: 137 DYAPIKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWVSC 196

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCG---HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           G RHSA+VTD+G + +FG    G+ G   H   N    P    SL    V Q+A G  HT
Sbjct: 197 GYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSY-PQRVESLHS--VLQVACGGKHT 253

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI----LESKRAKVVSCGARHSAV 409
           + ++ E  +Y FGG +FGQLG G      +  + ++P+        R   V+CG +HSA+
Sbjct: 254 LALT-EDELYCFGGGEFGQLGLGT-----LVFVADSPVAVGHFRKGRVTHVTCGEQHSAL 307

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAETTQ 466
           +T+ G + ++G  ++G+LG GD    N  +      F   +   +ACG  H L+ A   Q
Sbjct: 308 ITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLVFARPRQ 367



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 123/258 (47%), Gaps = 49/258 (18%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRPLLV 275
           ++ G  H+  +++ G+++ +G    GQLGL  +IK  V  P  +  L+            
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGL--QIKGPVTKPVCVKVLK------------ 84

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-----QL 330
                   G+  +S    +ACG  H+ V T  G +L  G    GQ G G  ND     +L
Sbjct: 85  --------GERAQS----VACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRL 132

Query: 331 RP--SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           RP   YA       ++ ++AG   +  ++ +GR++++G N  GQLG G D    +PK L 
Sbjct: 133 RPFCDYAP------IKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELN 186

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG--DSIDRNIPSLV-PIHG 445
                 +    VSCG RHSA++T+ G V S+G +  G+LGL      + + P  V  +H 
Sbjct: 187 M----GQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHS 242

Query: 446 FLPRNIACGWWHTLLLAE 463
            L   +ACG  HTL L E
Sbjct: 243 VL--QVACGGKHTLALTE 258



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 22/181 (12%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           I+CG  HSA VT+ G L  FG    GQ G        +P     L   + + +A G  HT
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98

Query: 354 VCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           +  + +G +   GGN  GQLG G  + + +  +L   P  +    K++S G   SA LTE
Sbjct: 99  LVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLR--PFCDYAPIKLLSAGDHTSAALTE 156

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---------IACGWWHTLLLAE 463
           DG++  WG N  GQLG G+            H  LP+          ++CG+ H+ L+ +
Sbjct: 157 DGRLFLWGDNSAGQLGFGND----------SHALLPKELNMGQSIHWVSCGYRHSALVTD 206

Query: 464 T 464
           +
Sbjct: 207 S 207


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 124/274 (45%), Gaps = 38/274 (13%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P LV       +  +AAG  HT  ++  G+++  G   E QLG+  R   +  P  +  L
Sbjct: 24  PRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNEESQLGVRQRSDAL-APTRVTAL 82

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           E                        +  V+ +ACG  H+  V D GA+  FG   YGQ G
Sbjct: 83  E------------------------QFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVG 118

Query: 323 HGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
            G    ++  P     L  + + ++AAG  HT+ +S  G V+  G   FG LG G  +  
Sbjct: 119 LGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGN 178

Query: 382 NVPKLLETPILESKRAKVV--SCGARHSAVLTEDGQVLSWGWNKYGQL-----GLGDSID 434
           +VP+    PI       VV  +CG  HSA +T DG+VL+WG  K+  L     G GD  +
Sbjct: 179 DVPR----PISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFEN 234

Query: 435 RNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
            + P  V  + G + R ++CG  HT+LL E   +
Sbjct: 235 CSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSV 268



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 31/225 (13%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L+P  VT     ++ +VA G  HTL + D G V  +G    GQ+GLG     V  P ++ 
Sbjct: 74  LAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVK 133

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
            L                           ++  +A GG H+  ++  G + + G G +G 
Sbjct: 134 DLRSM------------------------HIVRVAAGGSHTLALSSTGGVFSCGNGSFGA 169

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL-----GT 375
            G G+T     P   S L  + V QIA G  H+  I+ +GRV  +G  +   L     G 
Sbjct: 170 LGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGH 229

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
           G  +  + PK ++   L+    + VSCG  H+ +LTEDG V +WG
Sbjct: 230 GDFENCSTPKPVQA--LKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 103/231 (44%), Gaps = 33/231 (14%)

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           +VW +G G  GQLG GS  + V  P L+  L      K R ++                 
Sbjct: 1   EVWVFGRGDMGQLGDGS-TEDVFVPRLVKGL------KSRDVV----------------- 36

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
             +A G  H+A VT  G L   G     Q G    +D L P+  ++L   QV+++A G  
Sbjct: 37  -NLAAGALHTAAVTSDGELYVMGSNEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPA 95

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVL 410
           HT+ +   G V  FG  ++GQ+G G   A   +P++++   L S     V+ G  H+  L
Sbjct: 96  HTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKD--LRSMHIVRVAAGGSHTLAL 153

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHT 458
           +  G V S G   +G LG G +   ++P   PI    P     IACG  H+
Sbjct: 154 SSTGGVFSCGNGSFGALGRGTTEGNDVPR--PISRLWPLGVVQIACGENHS 202


>gi|321452330|gb|EFX63739.1| hypothetical protein DAPPUDRAFT_267802 [Daphnia pulex]
          Length = 727

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 95/199 (47%), Gaps = 21/199 (10%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---EHAASGK 269
            IT+VA G +HTL  ++ G+++ WG    GQLGL     M+PTP ++  L   +     K
Sbjct: 37  NITQVACGAQHTLAQNEWGEIFAWGSNSNGQLGLNVEESMIPTPKMVKSLATKQMIVKSK 96

Query: 270 DRPLLVRQGSVNSSGKAGR-----------------SYVKEIACGGRHSAVVTDAGALLT 312
                +R G  NS G+ G                    V  I CG  H+A +T  G +LT
Sbjct: 97  LFRSCLRLGPKNSFGQLGLGDTVDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVLT 156

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFG 371
           FG G+YGQ GH ++ +++ P     LM   V QI  G  HT+  +  + R+Y FG    G
Sbjct: 157 FGEGMYGQLGHYTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKDRIYAFGLGGSG 216

Query: 372 QLGTGVDQAENVPKLLETP 390
           QLGT      N P L+  P
Sbjct: 217 QLGTKSTANVNSPHLVIGP 235



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 16/173 (9%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIAAG 349
           + ++ACG +H+    + G +  +G    GQ G       +  P    SL   Q+  I   
Sbjct: 38  ITQVACGAQHTLAQNEWGEIFAWGSNSNGQLGLNVEESMIPTPKMVKSLATKQM--IVKS 95

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTG--VDQAENVPKLLETPILESKRAKVVSCGARHS 407
                C+ +  +      N FGQLG G  VD+ +  P  L++  L  +R   + CG  H+
Sbjct: 96  KLFRSCLRLGPK------NSFGQLGLGDTVDRPQ--PTQLKS--LRFQRVTYIRCGMDHT 145

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTL 459
           A LT DG VL++G   YGQLG   S +  +P  ++ + G     I CG  HTL
Sbjct: 146 AALTRDGGVLTFGEGMYGQLGHYTSANEMLPRKVLELMGTTVTQICCGRCHTL 198



 Score = 38.1 bits (87), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 24/39 (61%)

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           LE+     V+CGA+H+    E G++ +WG N  GQLGL 
Sbjct: 33  LEAHNITQVACGAQHTLAQNEWGEIFAWGSNSNGQLGLN 71


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 125/274 (45%), Gaps = 25/274 (9%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           G  +FT  P  V      KI +++ G  HTL LSD G ++ WG G  G LG G       
Sbjct: 164 GPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSY- 222

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           TP  +     A SGK +   V  G V    +A    V   + G +HS   T  G L T+G
Sbjct: 223 TPVRVYLGSEAGSGKKKEN-VGVGKV----RADPVVVTCCSAGAKHSMACTSDGTLWTWG 277

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            G  G+ G G     L P+    ++D  +  + AG  H+ CI  +G +Y +G   FG+LG
Sbjct: 278 HGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLG 337

Query: 375 TGVDQAE-NVPKLLE----TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G DQ E  VP+ +E     P+L+      V+CG  H+  LT  G V +WG      LG 
Sbjct: 338 HG-DQGEIPVPRKVEGFGGVPVLQ------VACGTFHTLALTHKGTVFAWGAGL--ALGF 388

Query: 430 GDSIDRN-----IPSLVPIHGFLPRNIACGWWHT 458
           G+  D +     +P  +        NIA G +H+
Sbjct: 389 GEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHS 422



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 153/423 (36%), Gaps = 139/423 (32%)

Query: 56  CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
           C  G   ++A +  G L TWG   + G+  L   +   +P       +  +V   AG +H
Sbjct: 257 CSAGAKHSMACTSDGTLWTWGHGGN-GRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSH 315

Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
              +   G +YTWG                +G F +   G Q  +P              
Sbjct: 316 SACIDRQGVLYTWG----------------SGGFGRLGHGDQGEIPV------------- 346

Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
                                      P  V    GV + +VA G  HTL L+  G V+ 
Sbjct: 347 ---------------------------PRKVEGFGGVPVLQVACGTFHTLALTHKGTVFA 379

Query: 236 WGYG-----GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           WG G     GEG+ G G    MV  P  +  +E A                         
Sbjct: 380 WGAGLALGFGEGEDGSGG---MVAVPKHLSDIEAA------------------------- 411

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM------DIQ-- 342
           V  IA G  HSA VT  G LL +G G   + GHG   +Q  P Y + L       D+Q  
Sbjct: 412 VLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSM 471

Query: 343 ------------------------------VEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
                                         ++ +  G  HT+ ++  G V+V+G N  GQ
Sbjct: 472 LGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQ 531

Query: 373 LGTGVDQAENV--PKLLE---TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           LG G D  E+   P  LE   TPI      + ++CG++H   + + G V +WG N  GQL
Sbjct: 532 LGLGEDVEEDQYEPVKLECFSTPI------RRIACGSKHCLAVAQYGDVFAWGANDNGQL 585

Query: 428 GLG 430
           GLG
Sbjct: 586 GLG 588



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 166/436 (38%), Gaps = 82/436 (18%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEA 122
           LA +  G +  WG+    G      G  G    P  L   EA+V+  AAG  H  +VT  
Sbjct: 369 LALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVG 428

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G++  WG      S+++       G  Q     K  A    +   SD ++   V + ++ 
Sbjct: 429 GDLLVWG---VGGSSRLGH-----GDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKRE 480

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
            S  +  + P +            T      +  +  G  HT+ L+  G VW WG   +G
Sbjct: 481 YSDLDVLDVPGTSG----------TNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDG 530

Query: 243 QLGLGSRIKMVP-TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           QLGLG  ++     P  + C                           + ++ IACG +H 
Sbjct: 531 QLGLGEDVEEDQYEPVKLECFS-------------------------TPIRRIACGSKHC 565

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI----- 356
             V   G +  +G    GQ G G       P+  ++L   Q   +  G  ++ CI     
Sbjct: 566 LAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR--QAVDVFCGDDYSACITSLGG 623

Query: 357 --SVEGR-------VYVFGGNQFGQLGTGVDQAEN---VPK--LLETPI-------LESK 395
             SV G        ++ +G  + G+LG G D A      P+  +   P+       LE +
Sbjct: 624 AQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQ 683

Query: 396 RAKVVSC--------GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGF 446
             K V C        G  HS  +T  G+  +WG   YG+LG+G + +   P+      G 
Sbjct: 684 AYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGV 743

Query: 447 LPRNIACGWWHTLLLA 462
             R++A G  H+L L+
Sbjct: 744 RLRSVAAGACHSLALS 759



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 132/326 (40%), Gaps = 80/326 (24%)

Query: 214 ITKVAAGGRHTLILS---DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP------CLEH 264
           + +VA G  HTL++    D  Q++GWG      LG+G  I+    P L+P        E 
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107

Query: 265 AASGKDRPLLVRQ-----GSVNSSGKAGRSY----------------------------- 290
           +    +  +LV++     G V + G   R                               
Sbjct: 108 SCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSW 167

Query: 291 ---------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP--- 332
                          +  I+CG  H+  ++D GAL  +G G YG  G G T+D   P   
Sbjct: 168 FTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRV 227

Query: 333 ---SYASSLMD-------------IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
              S A S                + V   +AG  H++  + +G ++ +G    G+LG G
Sbjct: 228 YLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLG 287

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
            ++    P +++  IL+ +    V+ G  HSA +   G + +WG   +G+LG GD  +  
Sbjct: 288 HNRGSLSPAVVDY-ILD-RDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP 345

Query: 437 IPSLVPIHGFLP-RNIACGWWHTLLL 461
           +P  V   G +P   +ACG +HTL L
Sbjct: 346 VPRKVEGFGGVPVLQVACGTFHTLAL 371



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 157/387 (40%), Gaps = 75/387 (19%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAAGWAHCVSVTEA 122
           +A + +G +  WGS DD GQ  L      +  EP  L   ++ + + A G  HC++V + 
Sbjct: 513 IALTGAGAVWVWGSNDD-GQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCLAVAQY 571

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G+V+ WG            D G  G      + + +A+                      
Sbjct: 572 GDVFAWG----------ANDNGQLGLGVVRPSFEPAAV---------------------- 599

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
            +A  ++ +   GD++   S C+ +L     ++            ++ G +W WG    G
Sbjct: 600 -TALRQAVDVFCGDDY---SACITSLGGAQSVSGETG--------TEFGDLWAWGAAESG 647

Query: 243 QLGLGSRIKM--VPTPHLI----PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
           +LGLG  +    + TP  +    P    +    +     R   V+ S          +  
Sbjct: 648 KLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFS---------PLCS 698

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G  HS  +T  G    +G G YG+ G G+T +   P+       +++  +AAG  H++ +
Sbjct: 699 GTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLAL 758

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK----RAKVVSCGARHSAVLTE 412
           S++G ++ +G  +     T        P++     LE +    + K +S   RHS  +TE
Sbjct: 759 SMDGDLWFWGRRE----DTCSTTNYMSPRIFMQ--LEGQGGVPKVKSISASERHSLAVTE 812

Query: 413 DGQVLSWGWNKYGQLGLG----DSIDR 435
            G+V +WG NK  Q G G    + +DR
Sbjct: 813 AGEVFAWGDNKLYQTGCGKRQAERLDR 839



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 36/224 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           V  + + +G  H+L ++  G+ + WG G  G+LG+G+               +  +  D 
Sbjct: 691 VSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANA-----------YTPTRCDF 739

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY-GQCGHGSTNDQL 330
           P  VR              ++ +A G  HS  ++  G L  + WG     C   ST + +
Sbjct: 740 PKGVR--------------LRSVAAGACHSLALSMDGDL--WFWGRREDTC---STTNYM 780

Query: 331 RPSYASSLMDI----QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
            P     L       +V+ I+A   H++ ++  G V+ +G N+  Q G G  QAE + + 
Sbjct: 781 SPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRP 840

Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
                L S   + V+ G + S  +   G+V + G  K G+LG G
Sbjct: 841 ERVAGLPSA-CQWVATGPQGSFFILASGEVFAAGVIKSGRLGTG 883


>gi|326526993|dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 534

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 120/236 (50%), Gaps = 29/236 (12%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGK 269
           G++I + AAG   T+++SD G+V+ +G    G++  G++  + V TP ++  L+      
Sbjct: 197 GIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEFGNQGSRAVATPQMVESLKDI---- 252

Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
                               Y+ + A G   +AV++  G + TF WG   + GH +  + 
Sbjct: 253 --------------------YIVQAAIGNFFTAVLSREGCVYTFSWGSDMKLGHQTEPND 292

Query: 330 LRPSYASS-LMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGTGVDQAENVPK 385
           ++P   +  L +I V QIAAG  + + ++ +     VY  G    G+LG G    E  P+
Sbjct: 293 VQPHLLTGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGTRTDEKYPR 352

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           L+E     + +  VV+ GA H+AV+ +DG+V +WGW +YG LG G+    ++P +V
Sbjct: 353 LIEQFQTLNIQPIVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKVV 408



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 172/418 (41%), Gaps = 71/418 (16%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
            G G ++A S SG   T+GS ++ GQ    S +    P P        +++AAAG    +
Sbjct: 153 AGPGHSIAVSTSGAAYTFGS-NNSGQLGHASLEEEWRPRPVRSLQGIRIIQAAAGAGRTM 211

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
            V++AG VY +G       +    +FG+ GS       +  A P       D    +  +
Sbjct: 212 LVSDAGRVYAFG-----KDSFGEVEFGNQGS-------RAVATPQMVESLKDIYIVQAAI 259

Query: 178 KRRKTSSAREE----------SENPASGDEFFTLSPCLVTLNP--GVKITKVAAGGRHTL 225
               T+    E                  E   + P L+T  P   + + ++AAG  + L
Sbjct: 260 GNFFTAVLSREGCVYTFSWGSDMKLGHQTEPNDVQPHLLT-GPLENIPVVQIAAGYCYLL 318

Query: 226 ILSDM---GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            L+       V+  G G  G+LG G+R      P LI   E   +   +P++V       
Sbjct: 319 ALACQPSGMSVYSVGCGLGGKLGHGTRTDE-KYPRLI---EQFQTLNIQPIVV------- 367

Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                       A G  H+AVV   G + T+GWG YG  GHG+   +  P    +L  ++
Sbjct: 368 ------------AAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSSVK 415

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-----TGVDQAENV--PKLLETPILESK 395
              +A G + T  +S +G VY FG  +   LG      G ++  NV  P+L+ +  L+SK
Sbjct: 416 AVYVATGDYTTFIVSCKGDVYSFGCGESSSLGHNTTIEGNNRHSNVLSPELVTS--LQSK 473

Query: 396 RAKVVSCGAR-------HSAVLTEDGQVLSWGWNKYGQLG---LGDSIDRNIPSLVPI 443
             KVV            H+  LTE G++ ++G    GQLG   +    +R  P  V I
Sbjct: 474 NEKVVQVSLTNSVYWNAHTFALTESGKLYAFGAGDKGQLGSELVSQESERGTPERVEI 531



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 6/167 (3%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  V+ +GA  TFG    GQ GH S  ++ RP    SL  I++ Q AAG   T+ +S  
Sbjct: 157 HSIAVSTSGAAYTFGSNNSGQLGHASLEEEWRPRPVRSLQGIRIIQAAAGAGRTMLVSDA 216

Query: 360 GRVYVFGGNQFG--QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           GRVY FG + FG  + G    +A   P+++E+  L+       + G   +AVL+ +G V 
Sbjct: 217 GRVYAFGKDSFGEVEFGNQGSRAVATPQMVES--LKDIYIVQAAIGNFFTAVLSREGCVY 274

Query: 418 SWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLA 462
           ++ W    +LG     +   P L+  P+       IA G+ + L LA
Sbjct: 275 TFSWGSDMKLGHQTEPNDVQPHLLTGPLENIPVVQIAAGYCYLLALA 321



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 4/99 (4%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ +S  G  Y FG N  GQLG    + E  P+ + +  L+  R    + GA
Sbjct: 150 QAIAGPGHSIAVSTSGAAYTFGSNNSGQLGHASLEEEWRPRPVRS--LQGIRIIQAAAGA 207

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI--PSLV 441
             + ++++ G+V ++G + +G++  G+   R +  P +V
Sbjct: 208 GRTMLVSDAGRVYAFGKDSFGEVEFGNQGSRAVATPQMV 246


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 129/300 (43%), Gaps = 43/300 (14%)

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
           R G  V     ++S  EE++NP       TL           +++ V+ G  H+L +   
Sbjct: 16  RLGFSVDFMPPSNSPLEETKNPEPIRTLETL-----------RVSLVSCGQEHSLAVCHR 64

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G+V+ WG G EGQLG G    +  TP  I  L                            
Sbjct: 65  GRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIK------------------------ 100

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAG 349
           + +++CG  HS  +++ G + ++G    GQ G G     Q  P    SL  I + Q+AAG
Sbjct: 101 IIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAG 160

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP----ILESKRAKVVSCGAR 405
             H+  +SV G  + +G N  GQL        NVP     P     L +     +SCG  
Sbjct: 161 GAHSFALSVSGTSFGWGNNSAGQLALS---GNNVPVQSYKPRSIGALRNLGVIYISCGYE 217

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETT 465
           H+AVLT++G+V ++G N  GQLG   S     P LV     L   I CG +HTL    TT
Sbjct: 218 HTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVSQIDCGSYHTLAYVYTT 277



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
             +P  +    G+KI +V+ G  H+L LS+ GQV+ WG   +GQLGLG       +P  +
Sbjct: 87  NFTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRV 146

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--L 317
             LE        PL                   ++A GG HS  ++ +G   +FGWG   
Sbjct: 147 RSLEGI------PL------------------AQVAAGGAHSFALSVSGT--SFGWGNNS 180

Query: 318 YGQCGHGSTN---DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ      N      +P    +L ++ V  I+ G  HT  ++  G+V+ FG N  GQLG
Sbjct: 181 AGQLALSGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLG 240

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E           + CG+ H+ A +   GQV+S+G
Sbjct: 241 HSPSAQDRGPQLVERI---DGLVSQIDCGSYHTLAYVYTTGQVVSFG 284



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS--IDRNIPSLVPIHGFLPR 449
           LE+ R  +VSCG  HS  +   G+V +WG    GQLG G+   I+     +  + G    
Sbjct: 43  LETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKII 102

Query: 450 NIACGWWHTLLLAETTQI 467
            ++CG +H+L L+E  Q+
Sbjct: 103 QVSCGDYHSLALSEGGQV 120


>gi|345492280|ref|XP_001603331.2| PREDICTED: regulator of chromosome condensation-like [Nasonia
           vitripennis]
          Length = 423

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 174/413 (42%), Gaps = 77/413 (18%)

Query: 55  VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
           +  GG      T E GK++T+G  +DEG     + K G    P  +   A V++  AG +
Sbjct: 72  IAAGGMHNVCLTKE-GKVMTFG-CNDEGALGRDTSKEGSETVPGFVELPAPVIQVTAGDS 129

Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
           H  ++ + G V+ WG                  SF +DS G    L  +           
Sbjct: 130 HSAALLDDGRVFIWG------------------SF-RDSHGTMGLLTKD----------- 159

Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
                                +E F   P  + L    K  K+A+G  H ++L     ++
Sbjct: 160 ---------------------NERF---PVEIQLQK--KFIKIASGADHLVLLDSAKHIY 193

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
             G G +GQLG   R+    T        H+  G ++  L+  G V    K G+    E 
Sbjct: 194 TCGCGEQGQLG---RLPERKTD------RHSRQGVNQ--LLSPGQVYF--KLGKHVEVEN 240

Query: 295 ACGGRHSAVV--TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
              G ++  V  + +G +  FG   Y Q G    + Q  P  + +L +    QI++G  H
Sbjct: 241 IWAGTYATFVKASHSGDIYVFGLNNYSQIGLKGVDKQFHPKVSKTLSNKNWTQISSGQHH 300

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
           T+ +  EG+V+V G  ++G+LG G  ++ +  +L   P LE  +   V+ G+  S  +TE
Sbjct: 301 TIALDDEGKVFVIGRKEYGRLGLGPVES-DATELTSVPTLEQMKCVDVAAGSAQSFAVTE 359

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVP---IHGFLPRNIACGWWHTLLLA 462
            G++ +WG    GQLG G+  D  +P+++    +       ++ G  HT++LA
Sbjct: 360 SGKLYAWGMGTSGQLGTGEEEDVEVPAIIESKQLKDVKVLRVSGGGQHTIVLA 412



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 113/260 (43%), Gaps = 47/260 (18%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT-PHLI----PCLEHAASG 268
           I  +AAGG H + L+  G+V  +G   EG LG  +  +   T P  +    P ++  A  
Sbjct: 69  IVAIAAGGMHNVCLTKEGKVMTFGCNDEGALGRDTSKEGSETVPGFVELPAPVIQVTAGD 128

Query: 269 KDRPLLVRQGSV-------NSSGKAG----------------RSYVKEIACGGRHSAVVT 305
                L+  G V       +S G  G                + ++K IA G  H  ++ 
Sbjct: 129 SHSAALLDDGRVFIWGSFRDSHGTMGLLTKDNERFPVEIQLQKKFIK-IASGADHLVLLD 187

Query: 306 DAGALLTFGWGLYGQCG-----------HGSTNDQLRPS--YASSLMDIQVEQIAAGLWH 352
            A  + T G G  GQ G               N  L P   Y      ++VE I AG + 
Sbjct: 188 SAKHIYTCGCGEQGQLGRLPERKTDRHSRQGVNQLLSPGQVYFKLGKHVEVENIWAGTYA 247

Query: 353 T-VCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           T V  S  G +YVFG N + Q+G  GVD+  + PK+ +T  L +K    +S G  H+  L
Sbjct: 248 TFVKASHSGDIYVFGLNNYSQIGLKGVDKQFH-PKVSKT--LSNKNWTQISSGQHHTIAL 304

Query: 411 TEDGQVLSWGWNKYGQLGLG 430
            ++G+V   G  +YG+LGLG
Sbjct: 305 DDEGKVFVIGRKEYGRLGLG 324



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 16/171 (9%)

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRV 362
           +T  G +L  G G  GQ G G   D L  +  + + D   +  IAAG  H VC++ EG+V
Sbjct: 31  ITTGGIVLACGQGDVGQLGLG--EDVLEKTRFAVIPDHTNIVAIAAGGMHNVCLTKEGKV 88

Query: 363 YVFGGNQFGQLG--TGVDQAENVPKLLE--TPILESKRAKVVSCGARHSAVLTEDGQVLS 418
             FG N  G LG  T  + +E VP  +E   P+++      V+ G  HSA L +DG+V  
Sbjct: 89  MTFGCNDEGALGRDTSKEGSETVPGFVELPAPVIQ------VTAGDSHSAALLDDGRVFI 142

Query: 419 WG--WNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           WG   + +G +GL    +   P  + +     + IA G  H +LL     I
Sbjct: 143 WGSFRDSHGTMGLLTKDNERFPVEIQLQKKFIK-IASGADHLVLLDSAKHI 192



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 39/211 (18%)

Query: 225 LILSDM---GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
           LIL ++   G V   G G  GQLGLG  +       +IP                     
Sbjct: 26  LILREITTGGIVLACGQGDVGQLGLGEDVLEKTRFAVIP--------------------- 64

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND--QLRPSYASSLM 339
                  + +  IA GG H+  +T  G ++TFG    G  G  ++ +  +  P +    +
Sbjct: 65  -----DHTNIVAIAAGGMHNVCLTKEGKVMTFGCNDEGALGRDTSKEGSETVPGFVE--L 117

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRA 397
              V Q+ AG  H+  +  +GRV+++G   +  G +G      E  P  ++   L+ K  
Sbjct: 118 PAPVIQVTAGDSHSAALLDDGRVFIWGSFRDSHGTMGLLTKDNERFPVEIQ---LQKKFI 174

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
           K+ S GA H  +L     + + G  + GQLG
Sbjct: 175 KIAS-GADHLVLLDSAKHIYTCGCGEQGQLG 204


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 200/488 (40%), Gaps = 66/488 (13%)

Query: 10  ENEKMEECKETVVYMWGYLP------GTSPEK-SPILSPIPARLCGGDSWKDVCGGGCGF 62
           EN  +    +  V  WG         GT+ ++ SP+L    + L G          G   
Sbjct: 204 ENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLV---SSLTG----VTAIAAGANH 256

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
           +LA    G +  WG         L  G   +   P  +P    V + +AG  H +++   
Sbjct: 257 SLAVLADGTVRAWGY---NASGRLGDGTTTQRATPVAVPGLTGVTEISAGGGHSLALLAD 313

Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
           G    WG       + V+   G      + S    S+L    A  +    G   +     
Sbjct: 314 GTARAWG-------SNVSGQLGDGTVSNRTSPVLVSSLTGVTALSA---GGNHSLALLAD 363

Query: 183 SSAREESENPAS--GDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYG 239
            +AR    N +   GD   T     V L PG+  +  +AAGG H+L +   G V  WG+ 
Sbjct: 364 GTARAWGANVSGQLGDGTTTQRTLPVGL-PGLTGVAALAAGGYHSLAVLANGTVRAWGHN 422

Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAAS---GKDRPL-LVRQGSV-----NSSGKAGRSY 290
             GQLG GS  +    P ++P L    S   G D  L L+  G+V     N+SG+ G   
Sbjct: 423 TYGQLGDGSTAQRT-APVVVPALTGVVSLTAGYDHSLALLSDGTVRAWGNNASGQLGDGT 481

Query: 291 VKE--------------IACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
             +                 GG+  H+  +   G +  +G+ + GQ G GST+++  P  
Sbjct: 482 TNQRGTPVQVSGLTNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVA 541

Query: 335 ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
            S L +  V  IAAG  +++ +   G V  +G   +G LG   D     PK +  P + +
Sbjct: 542 VSGLTN--VVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTPKAV--PGVTN 597

Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
             A  ++ GA H   L  DG V +WG N +GQLG G ++ RN P  VP +   +   IA 
Sbjct: 598 VVA--IAAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGLTNVVA--IAT 653

Query: 454 GWWHTLLL 461
           GW H+L L
Sbjct: 654 GWDHSLAL 661



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 127/279 (45%), Gaps = 35/279 (12%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----ASG 268
           +  ++A+G  H+L+ +  G V  WG    GQLG G+  +   +P  +P L  A    A G
Sbjct: 46  RAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQR-SSPTAVPGLAGAVAVSAGG 104

Query: 269 KDRPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVTDAG 308
           +    L+  G+V     N+ G+ G                S V  IA G  H+  +   G
Sbjct: 105 EYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGLSGVVAIAAGNNHALALLSDG 164

Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
            +  +G+  YGQ G G+T  +  P     L    V  IAAG  H++ +  +G V  +G N
Sbjct: 165 TVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTG--VVAIAAGENHSLAVLADGTVRAWGNN 222

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            +G+LG G       P L+ +          ++ GA HS  +  DG V +WG+N  G+LG
Sbjct: 223 TYGRLGDGTTTQRTSPVLVSSL----TGVTAIAAGANHSLAVLADGTVRAWGYNASGRLG 278

Query: 429 LGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL-LLAETT 465
            G +  R  P  VP + G     I+ G  H+L LLA+ T
Sbjct: 279 DGTTTQRATPVAVPGLTGV--TEISAGGGHSLALLADGT 315



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 169/430 (39%), Gaps = 49/430 (11%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   +L  +  G +  WG   D     L  G   +   P  +P  A  V  +AG  + ++
Sbjct: 53  GKAHSLLATPDGTVRAWG---DNASGQLGDGTTTQRSSPTAVPGLAGAVAVSAGGEYSLA 109

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           +   G V  WG             +G  G           A+P      +        + 
Sbjct: 110 LLGDGTVRAWG----------NNTYGQLGDGTTPHRASPGAVPGLSGVVAIAAGNNHALA 159

Query: 179 RRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
                + R    N     GD   T     V +     +  +AAG  H+L +   G V  W
Sbjct: 160 LLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVVAIAAGENHSLAVLADGTVRAW 219

Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPL------LVRQGSVNSSGKAG 287
           G    G+LG G+  +   +P L+  L      A+G +  L       VR    N+SG+ G
Sbjct: 220 GNNTYGRLGDGTTTQRT-SPVLVSSLTGVTAIAAGANHSLAVLADGTVRAWGYNASGRLG 278

Query: 288 R---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                           + V EI+ GG HS  +   G    +G  + GQ G G+ +++  P
Sbjct: 279 DGTTTQRATPVAVPGLTGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSP 338

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
              SSL    V  ++AG  H++ +  +G    +G N  GQLG G      +P  L  P L
Sbjct: 339 VLVSSLTG--VTALSAGGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGL--PGL 394

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNI 451
               A  ++ G  HS  +  +G V +WG N YGQLG G +  R  P +VP + G +  ++
Sbjct: 395 TGVAA--LAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVPALTGVV--SL 450

Query: 452 ACGWWHTLLL 461
             G+ H+L L
Sbjct: 451 TAGYDHSLAL 460



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 158/389 (40%), Gaps = 51/389 (13%)

Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
           V+ A+G AH +  T  G V  WG          +   G   + Q+ S    +A+P     
Sbjct: 48  VRLASGKAHSLLATPDGTVRAWG-------DNASGQLGDGTTTQRSS---PTAVPGLAGA 97

Query: 167 PSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVK-ITKVAAGG 221
            +    GE  +      + R    N       G      SP  V   PG+  +  +AAG 
Sbjct: 98  VAVSAGGEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAV---PGLSGVVAIAAGN 154

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHL-IPCLEHAASGKDRPLLV-RQG 278
            H L L   G V  WGY   GQLG G+   +  P   L +  +   A+G++  L V   G
Sbjct: 155 NHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVVAIAAGENHSLAVLADG 214

Query: 279 SV-----NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           +V     N+ G+ G                + V  IA G  HS  V   G +  +G+   
Sbjct: 215 TVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGANHSLAVLADGTVRAWGYNAS 274

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           G+ G G+T  +  P     L    V +I+AG  H++ +  +G    +G N  GQLG G  
Sbjct: 275 GRLGDGTTTQRATPVAVPGLTG--VTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTV 332

Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
                P L+ +          +S G  HS  L  DG   +WG N  GQLG G +  R +P
Sbjct: 333 SNRTSPVLVSSL----TGVTALSAGGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLP 388

Query: 439 SLVP-IHGFLPRNIACGWWHTL-LLAETT 465
             +P + G     +A G +H+L +LA  T
Sbjct: 389 VGLPGLTGVAA--LAAGGYHSLAVLANGT 415



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 159/432 (36%), Gaps = 44/432 (10%)

Query: 11  NEKMEECKETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSES 69
           N  +    +     WG  + G   + +     +P  L G      +  GG   +LA   +
Sbjct: 355 NHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGLPGLTGVAALAAGGY-HSLAVLAN 413

Query: 70  GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           G +  WG  +  GQ  L  G   +   P  +P    VV   AG+ H +++   G V  WG
Sbjct: 414 GTVRAWGH-NTYGQ--LGDGSTAQRTAPVVVPALTGVVSLTAGYDHSLALLSDGTVRAWG 470

Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
                     +   G   + Q+ +  + S L    A    K      +    T  A   +
Sbjct: 471 -------NNASGQLGDGTTNQRGTPVQVSGLTNVVALSGGKLYHALALLSDGTVRAWGYN 523

Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
            N   GD   +     V ++    +  +AAGG ++L L   G V  WGYG  G LG    
Sbjct: 524 MNGQLGDGSTSNRWTPVAVSGLTNVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGR-DY 582

Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
               PTP  +P                          G + V  IA G  H   +   G 
Sbjct: 583 DTYSPTPKAVP--------------------------GVTNVVAIAAGANHVLALRADGT 616

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
           +  +G   +GQ G G+T  +  P     L +  V  IA G  H++ +  +G VY +G N 
Sbjct: 617 VYAWGRNDFGQLGDGTTVQRNTPVQVPGLTN--VVAIATGWDHSLALRADGTVYAWGYNY 674

Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
             QLG   D +    +    P+        V+ G   S  L   G V +WG N +G+LG 
Sbjct: 675 ARQLG---DGSTANYRQTPAPVPGLTNVVAVTAGGNQSLALLSSGAVHAWGDNSHGELGN 731

Query: 430 GDSIDRNIPSLV 441
           G ++    P  V
Sbjct: 732 GSTLTPPAPVAV 743



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 10/183 (5%)

Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
           ++G      +A G  HS + T  G +  +G    GQ G G+T  +  P+    L      
Sbjct: 41  RSGSPRAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRSSPTAVPGLAG--AV 98

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
            ++AG  +++ +  +G V  +G N +GQLG G       P  +  P L    A  ++ G 
Sbjct: 99  AVSAGGEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAV--PGLSGVVA--IAAGN 154

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTL-LLA 462
            H+  L  DG V +WG+N YGQLG G +  R  P +++ + G +   IA G  H+L +LA
Sbjct: 155 NHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVVA--IAAGENHSLAVLA 212

Query: 463 ETT 465
           + T
Sbjct: 213 DGT 215


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 123/288 (42%), Gaps = 30/288 (10%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG---LGSRIKMVPTP 256
            +L+P  V +   + +T +AAGG H       G +W WG    GQLG   L  R+  V   
Sbjct: 863  SLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQ 922

Query: 257  HLIPCLEHAASGKDRPLLVRQGS-----VNSSGKAG---RSY------------VKEIAC 296
             L+     AA G       + G+     +NS G+ G    SY            V  +A 
Sbjct: 923  GLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLMSVTAMAA 982

Query: 297  GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            GG H A     G L T+G   YGQ G G  +  L P          V  IAAG  HT+ +
Sbjct: 983  GGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAV 1042

Query: 357  SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
              +G V+ +GGN +GQLG G         L    +        +S G  H+  L  DG V
Sbjct: 1043 RQDGTVWSWGGNAYGQLGDGT----TAQSLTPVQVQGLTGVTAISAGDAHTVALRRDGTV 1098

Query: 417  LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
             +WG N +GQLG G +  R  P  V  + G +   IA G  HT+ L +
Sbjct: 1099 WAWGRNSWGQLGDGTTTHRATPVQVQGLTGVIA--IAAGSLHTVALRQ 1144



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 174/434 (40%), Gaps = 55/434 (12%)

Query: 42   IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
            +P ++ G  S   +  GG   A A  + G L TWG  +  GQ  L  G   ++  P  + 
Sbjct: 967  LPVQVQGLMSVTAMAAGGYHMA-AAGQDGTLWTWG-LNSYGQ--LGGGPLSQSLTPVQVQ 1022

Query: 102  TEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
             +    V   AAG++H ++V + G V++WG              G+A     D T  QS 
Sbjct: 1023 VQGLTGVAAIAAGFSHTLAVRQDGTVWSWG--------------GNAYGQLGDGTTAQSL 1068

Query: 160  LP------TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
             P      T     S   A    ++R  T  A   +     GD   T     V +     
Sbjct: 1069 TPVQVQGLTGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTG 1128

Query: 214  ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKD 270
            +  +AAG  HT+ L   G VW WG    GQLG G+   R   V    L   +  AA    
Sbjct: 1129 VIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGVIAIAAGSLH 1188

Query: 271  RPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGAL 310
               L + G+V     N  G+ G                + V  IA G  H+A V   G  
Sbjct: 1189 TVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLTGVTTIAAGYFHTAAVRQDGTA 1248

Query: 311  LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
             T+G+ L+GQ G G+  D+  P     L    V  +AAG  HTV +  +G V+ +G N  
Sbjct: 1249 WTWGFNLWGQLGDGTFTDRATPVQVQGLTG--VSALAAGYAHTVVVGEDGTVWAWGNNSG 1306

Query: 371  GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
             QLG G     + P  +E        A  ++ G  H+  ++ DG    WG N  GQ+G G
Sbjct: 1307 TQLGNGSSTDRSTPVQVE----ALTGAFSLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDG 1362

Query: 431  DSIDRNIPSLVPIH 444
             + DR  P  V + 
Sbjct: 1363 TTADRPTPVNVMVQ 1376



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 194/493 (39%), Gaps = 67/493 (13%)

Query: 10   ENEKMEECKETVVYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
             N  +   ++  V+ WG+   G   + +      P ++ G      +  GG    +A  +
Sbjct: 580  SNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPVQVPGVTGAVAIAAGGS-HTVALLQ 638

Query: 69   SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
             G + TWG  +  GQ  L  G       P  +   A V+  A    H V+V + G V+TW
Sbjct: 639  DGTVWTWGY-NIWGQ--LGDGTTTHRHSPVQVQGLADVIAIATNNGHTVAVRQDGTVWTW 695

Query: 129  GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
            G               S+G    D T  Q   P +    +D  A   +    +T + R++
Sbjct: 696  G-------------LNSSGQL-GDGTTTQRLTPVQVHGLTDATA--ILTSSSQTVAMRQD 739

Query: 189  SENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
                A GD  +           L+P  V +   + +T +AAGG H       G +W WG 
Sbjct: 740  RTLWAWGDNHWGQLGDGTTTRRLTP--VQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGL 797

Query: 239  GGEGQLG---LGSRIKMVPTPHL-IPCLEHAASGKDRPLLVRQ-GSV-----NSSGKAGR 288
               GQLG   L  R+  V    L        A+G    + VRQ G+V     N SG+ G 
Sbjct: 798  NSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGD 857

Query: 289  SY-----------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                               V  +A GG H A     G L T+G   YGQ G G  + +L 
Sbjct: 858  GTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLL 917

Query: 332  PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
            P     LMD  V  +AAG +H      +G ++ +G N +GQLG G        +LL   +
Sbjct: 918  PVQVQGLMD--VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGG----PLSYRLLPVQV 971

Query: 392  LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL-PRN 450
                    ++ G  H A   +DG + +WG N YGQLG G       P  V + G      
Sbjct: 972  QGLMSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAA 1031

Query: 451  IACGWWHTLLLAE 463
            IA G+ HTL + +
Sbjct: 1032 IAAGFSHTLAVRQ 1044



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 190/463 (41%), Gaps = 46/463 (9%)

Query: 9   EENEKMEECKETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATS 67
            ++E +   ++  V+ WG    G   + +  +   P ++ G      +  GG GFA+A  
Sbjct: 229 NDSETVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTGVTAIAAGG-GFAVALR 287

Query: 68  ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
           + G L  WGS +  GQ  L +G    +  P  +     V   AA   H V++ + G ++ 
Sbjct: 288 QDGTLWAWGS-NSRGQ--LGNGTTFGSYRPEQVQGLTGVTAIAASGIHTVALRQDGTLWA 344

Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
           WG          +   G   +  + +  +   L    A  +         K+  T  A  
Sbjct: 345 WG-------NNSSGQLGDGTTTVRFTPVQVQGLTGVTAIAAGYLY-TVASKQDGTVWAWG 396

Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
           ++E    GD   T     V +     +T +AAG  +T+     G VW WG     QLG G
Sbjct: 397 DNEWGQLGDGTTTRRLTPVQVQGLTGVTAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEG 456

Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLL---VRQ-GSV-----NSSGKAGRSY-------- 290
           + +    TP  +  LE   +     LL   VRQ G+V     N+ G+ G           
Sbjct: 457 A-VSQRHTPGEVQGLEGITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTRRLTPV 515

Query: 291 -------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
                  V  +A    H   V   G +  +G G +GQ G G+  D+  P     L    V
Sbjct: 516 QVQGLAGVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLTG--V 573

Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
             IAAG  HTV +  +G V+ +G N +GQLG G       P  ++ P +    A  ++ G
Sbjct: 574 TAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTP--VQVPGVTG--AVAIAAG 629

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
             H+  L +DG V +WG+N +GQLG G +  R+ P  V + G 
Sbjct: 630 GSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSP--VQVQGL 670



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 125/288 (43%), Gaps = 32/288 (11%)

Query: 200  TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTP 256
            +L+P  V +     +  +AAG  HTL +   G VW WG    GQLG G+  +    V   
Sbjct: 1015 SLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQ 1074

Query: 257  HLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGR---------------SYVKEIAC 296
             L      +A       L R G+V     NS G+ G                + V  IA 
Sbjct: 1075 GLTGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGVIAIAA 1134

Query: 297  GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  H+  +   G +  +G   +GQ G G+T  +  P     L    V  IAAG  HTV +
Sbjct: 1135 GSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTG--VIAIAAGSLHTVAL 1192

Query: 357  SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
              +G V+ +G N  GQLG G        +L    +        ++ G  H+A + +DG  
Sbjct: 1193 RQDGTVWAWGFNDLGQLGDGT----TTRRLTPAQVQGLTGVTTIAAGYFHTAAVRQDGTA 1248

Query: 417  LSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-IACGWWHTLLLAE 463
             +WG+N +GQLG G   DR  P  V + G    + +A G+ HT+++ E
Sbjct: 1249 WTWGFNLWGQLGDGTFTDRATP--VQVQGLTGVSALAAGYAHTVVVGE 1294



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 171/422 (40%), Gaps = 47/422 (11%)

Query: 62  FALATSESGKLITWGSADDE-GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
           + +A+ + G +  WG  D+E GQ  L  G       P  +     V   AAG+ + V+  
Sbjct: 382 YTVASKQDGTVWAWG--DNEWGQ--LGDGTTTRRLTPVQVQGLTGVTAIAAGYLYTVASK 437

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
           + G V+ WG              G     Q+ + G+   L    A  +        V++ 
Sbjct: 438 QDGTVWAWG-------DNKRSQLGEGAVSQRHTPGEVQGLEGITAIAASNLL-TVAVRQD 489

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
            T  A  ++     GD   T     V +     +T VAA   H + +   G VW WG G 
Sbjct: 490 GTVWAWGDNARGQLGDGTTTRRLTPVQVQGLAGVTAVAASDYHLVAVRQDGTVWAWGVGF 549

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQ-GSV-----NSSGKAGRSYV 291
            GQLG G+ +    TP  +  L      A+G +  + +RQ G+V     N+ G+ G    
Sbjct: 550 WGQLGDGTGMDR-STPVQVQGLTGVTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTT 608

Query: 292 K---------------EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                            IA GG H+  +   G + T+G+ ++GQ G G+T  +  P    
Sbjct: 609 AGHLTPVQVPGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQ 668

Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
            L D  V  IA    HTV +  +G V+ +G N  GQLG G        +L    +     
Sbjct: 669 GLAD--VIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGT----TTQRLTPVQVHGLTD 722

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-IACGW 455
           A  +   +  +  + +D  + +WG N +GQLG G +  R  P  V + G +    +A G 
Sbjct: 723 ATAILTSSSQTVAMRQDRTLWAWGDNHWGQLGDGTTTRRLTP--VQVQGLMDVTAMAAGG 780

Query: 456 WH 457
           +H
Sbjct: 781 YH 782



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 109/252 (43%), Gaps = 37/252 (14%)

Query: 220  GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCL-----------EHAAS 267
            G  HT+ +   G VW WG    GQLG G+  + + P    +  L             AA+
Sbjct: 831  GDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAA 890

Query: 268  GKDRPLLVRQGSVNSSGKAG---RSY------------VKEIACGGRHSAVVTDAGALLT 312
            G+D  L      +NS G+ G    SY            V  +A GG H A     G L T
Sbjct: 891  GQDGTLWTW--GLNSYGQLGGGPLSYRLLPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWT 948

Query: 313  FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            +G   YGQ G G  + +L P     LM   V  +AAG +H      +G ++ +G N +GQ
Sbjct: 949  WGLNSYGQLGGGPLSYRLLPVQVQGLMS--VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQ 1006

Query: 373  LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
            LG G       P  ++   L    A  ++ G  H+  + +DG V SWG N YGQLG G +
Sbjct: 1007 LGGGPLSQSLTPVQVQVQGLTGVAA--IAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTT 1064

Query: 433  IDRNIPSLVPIH 444
                  SL P+ 
Sbjct: 1065 AQ----SLTPVQ 1072



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 110/267 (41%), Gaps = 39/267 (14%)

Query: 177 VKRRKTSSAREESENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
           V++  T  A   +++   GD   T   SP  V        T +AAG  HT+  S  G VW
Sbjct: 88  VRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQVMTGA----TAIAAGIYHTVAASQDGTVW 143

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
            WG    GQLG G+ I+                 +  P+ V+          G + V  +
Sbjct: 144 TWGRNSSGQLGDGTSIQ-----------------RFSPVQVQ----------GLTGVTAV 176

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
           A G  HSA +   G + T+G  L GQ G G++  +L P     L    V  I+A    TV
Sbjct: 177 AAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLTG--VIAISANDSETV 234

Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
            +  +G V+ +G N  GQLG G       P      +L       ++ G   +  L +DG
Sbjct: 235 ALRQDGTVWAWGNNSSGQLGDGTTTVRFTP----VQVLGLTGVTAIAAGGGFAVALRQDG 290

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            + +WG N  GQLG G +     P  V
Sbjct: 291 TLWAWGSNSRGQLGNGTTFGSYRPEQV 317



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 8/95 (8%)

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           HT+ +  +G V+ +G N  GQLG G       P  + T       A  ++ G  H+   +
Sbjct: 84  HTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQVMTG------ATAIAAGIYHTVAAS 137

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
           +DG V +WG N  GQLG G SI R  P  V + G 
Sbjct: 138 QDGTVWTWGRNSSGQLGDGTSIQRFSP--VQVQGL 170


>gi|440792449|gb|ELR13671.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein, partial [Acanthamoeba castellanii
           str. Neff]
          Length = 297

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 127/267 (47%), Gaps = 32/267 (11%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + +VAAG  H+L L+  G+V  WG  G  Q+G      +          E AA  + + +
Sbjct: 25  VVQVAAGWSHSLALAASGKVLCWGSSGFNQMGC-----LYEEEDAAGTEEEAARSQQQLV 79

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
             R      +G      V  IA G RHSA+VT  G LLT G G +G+ GHG    +  P+
Sbjct: 80  KRRLVPAPMAGLHSSIVVTCIAAGMRHSALVTQEGHLLTLGHGKFGELGHGDLATRSTPT 139

Query: 334 YASSLMD--IQVEQIAAGLWHTVCISVEG-----------RVYVFGG-NQFGQLGTGVDQ 379
             + L +  ++V Q+A G  HTVC++  G           R+ + G  ++ G+      Q
Sbjct: 140 LVAHLAESRLRVAQVACGQKHTVCLTAGGVPPTSSSKPKPRMIIRGTRHRRGETCHSTPQ 199

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIP 438
             +VP         +K +K+V CG   + ++ +DG  L   G N YGQLGLGD+ DR  P
Sbjct: 200 PVDVPA--------NKVSKIV-CGWSFTLIVADDGSSLFGLGRNNYGQLGLGDTTDRPRP 250

Query: 439 SLVPIHGFLP---RNIACGWWHTLLLA 462
           + +P   +       I CG  HTLLLA
Sbjct: 251 TRIPSEAWNDAPIDKIVCGCEHTLLLA 277



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 148/344 (43%), Gaps = 72/344 (20%)

Query: 94  TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF--QK 151
           TP+   LP   +VV+ AAGW+H +++  +G+V  WG          +  F   G    ++
Sbjct: 15  TPQRVVLPE--TVVQVAAGWSHSLALAASGKVLCWG----------SSGFNQMGCLYEEE 62

Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
           D+ G +     E+A     R+ +++VKRR   +       P +G            L+  
Sbjct: 63  DAAGTE-----EEA----ARSQQQLVKRRLVPA-------PMAG------------LHSS 94

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + +T +AAG RH+ +++  G +   G+G  G+LG G  +    TP L+    H A  + R
Sbjct: 95  IVVTCIAAGMRHSALVTQEGHLLTLGHGKFGELGHGD-LATRSTPTLV---AHLAESRLR 150

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
                              V ++ACG +H+  +T  G   T       +     T  +  
Sbjct: 151 -------------------VAQVACGQKHTVCLTAGGVPPTSSSKPKPRMIIRGTRHRRG 191

Query: 332 PSYASSLMDI-----QVEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPK 385
            +  S+   +     +V +I  G   T+ ++ +G  ++  G N +GQLG G       P 
Sbjct: 192 ETCHSTPQPVDVPANKVSKIVCGWSFTLIVADDGSSLFGLGRNNYGQLGLGDTTDRPRPT 251

Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            + +          + CG  H+ +L   GQ+ SWGWN++G LG+
Sbjct: 252 RIPSEAWNDAPIDKIVCGCEHTLLLA-GGQLFSWGWNEHGNLGV 294



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 94/249 (37%), Gaps = 52/249 (20%)

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
           +G+LGLG+  +  PTP  +   E                           V ++A G  H
Sbjct: 1   DGRLGLGAPCRDQPTPQRVVLPE--------------------------TVVQVAAGWSH 34

Query: 301 SAVVTDAGALLTFGWGLYGQCG-------------------HGSTNDQLRPSYASSLMD- 340
           S  +  +G +L +G   + Q G                         +L P+  + L   
Sbjct: 35  SLALAASGKVLCWGSSGFNQMGCLYEEEDAAGTEEEAARSQQQLVKRRLVPAPMAGLHSS 94

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           I V  IAAG+ H+  ++ EG +   G  +FG+LG G     + P L+        R   V
Sbjct: 95  IVVTCIAAGMRHSALVTQEGHLLTLGHGKFGELGHGDLATRSTPTLVAHLAESRLRVAQV 154

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR------NIPSLVPIHGFLPRNIACG 454
           +CG +H+  LT  G   +       ++ +  +  R      + P  V +       I CG
Sbjct: 155 ACGQKHTVCLTAGGVPPTSSSKPKPRMIIRGTRHRRGETCHSTPQPVDVPANKVSKIVCG 214

Query: 455 WWHTLLLAE 463
           W  TL++A+
Sbjct: 215 WSFTLIVAD 223


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 42/257 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++  VA G  H+ + +  G+++ +G G  G LG G R + VP P  +  L        
Sbjct: 373 GLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDR-ESVPYPREVQIL-------- 423

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA----------LLTFGWGLYGQ 320
                          +G   +K +ACG  H+A + +  +          L T+G G   +
Sbjct: 424 ---------------SGLKTIK-VACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHR 467

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHGS    L P+  S+L+D    Q+A G   TV ++  G V+  GG  +GQLG  +   
Sbjct: 468 LGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSDG 527

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
             +P L++  ++  +  + +SCGA H AVLT   +V +WG    G+LG GD+ DR  P+ 
Sbjct: 528 R-LPCLVQDKLV-GEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTF 585

Query: 441 VPIHGFLPRN---IACG 454
           V       RN   I+CG
Sbjct: 586 V--EALKDRNVKSISCG 600



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V +IACG RH A+VT  G + T+G    G+ GHG  ND  RP     L    V+ +A G 
Sbjct: 269 VHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGE 328

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +S  G ++ +G   +  G LG G + +  +PK +  P LE  +   V+CG  HSA
Sbjct: 329 YHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGP-LEGLQVLSVACGTWHSA 387

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAE 463
           + T +G++ ++G   +G LG GD      P  V I  G     +ACG WHT  + E
Sbjct: 388 LATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIE 443



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 129/279 (46%), Gaps = 43/279 (15%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L+P  +  N  + + ++A G RH  +++  G+V+ WG    G+LG G             
Sbjct: 256 LTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHG------------- 302

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY-- 318
            +++  S   RP LV   +VN+        V  +ACG  H+  V+ +G L T+G G +  
Sbjct: 303 -IDNDFS---RPHLVEFLAVNN--------VDFVACGEYHTCAVSTSGDLFTWGDGTHNA 350

Query: 319 GQCGHGSTNDQLRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           G  GHG+      P   S  ++ +QV  +A G WH+   +  G+++ FG   FG LG G 
Sbjct: 351 GLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHG- 409

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTE----------DGQVLSWGWNKYGQL 427
              E+VP   E  IL   +   V+CG  H+A + E            ++ +WG     +L
Sbjct: 410 -DRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRL 468

Query: 428 GLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
           G G      +P+ V  +  +    +ACG  HT+ +A TT
Sbjct: 469 GHGSKETYLLPTCVSALIDYNFHQLACG--HTMTVALTT 505



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 6/137 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S + + V QIA G+ H   ++ +G V+ +G    G+LG G+D   + P L+
Sbjct: 254 DVLTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLV 313

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSW--GWNKYGQLGLGDSIDRNIPSLV--PI 443
           E   L       V+CG  H+  ++  G + +W  G +  G LG G  +   IP  V  P+
Sbjct: 314 E--FLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPL 371

Query: 444 HGFLPRNIACGWWHTLL 460
            G    ++ACG WH+ L
Sbjct: 372 EGLQVLSVACGTWHSAL 388



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 136/369 (36%), Gaps = 62/369 (16%)

Query: 54  DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-----TPEPFPLPTEA-SVV 107
           D    G     A S SG L TWG    +G        HG       P+    P E   V+
Sbjct: 322 DFVACGEYHTCAVSTSGDLFTWG----DGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVL 377

Query: 108 KAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGKQ 157
             A G  H    T  G+++T+G           RE VP  +  +      + +       
Sbjct: 378 SVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWH 437

Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
           +A   E       ++G  +  R+  +    +      G +   L P  V+        ++
Sbjct: 438 TAAIIEVM----SQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQL 493

Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
           A G   T+ L+  G V+  G    GQLG                  +  S    P LV+ 
Sbjct: 494 ACGHTMTVALTTSGHVFTMGGTAYGQLG------------------NPLSDGRLPCLVQD 535

Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
             V         +V+EI+CG  H AV+T    + T+G G  G+ GHG T D+  P++  +
Sbjct: 536 KLVGE-------FVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEA 588

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           L D  V+ I+ G   T  I +    +V G +Q   + +G  QA    +         KR 
Sbjct: 589 LKDRNVKSISCGSNFTASICIHK--WVSGADQ--SVCSGCRQAFGFTR---------KRH 635

Query: 398 KVVSCGARH 406
              +CG  H
Sbjct: 636 NCYNCGLVH 644


>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
          Length = 477

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 93/172 (54%), Gaps = 3/172 (1%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  I+CG  H++++   G + TFG   +GQ G G T    +P+   SL   +V Q+A G 
Sbjct: 27  VLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGR 86

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            HT+  +  G++Y FG N   QLG G+D  E V        LES   K++S G  HS VL
Sbjct: 87  SHTLLATESGKIYSFGCNNDRQLGLGLDD-EKVCSPTVIKGLESHAVKMLSAGMYHSCVL 145

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLVPIHGFLPRNIACGWWHTLLL 461
           T+ G V  WG  + GQLG G+ + ++  P  + +   +   IACG++HT L+
Sbjct: 146 TDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDEVV-CIACGYYHTALV 196



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 124/273 (45%), Gaps = 43/273 (15%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           D+    SP ++       +  ++AG  H+ +L+D G V+ WG G EGQLG G  +    T
Sbjct: 114 DDEKVCSPTVIKGLESHAVKMLSAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHET 173

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
           P  +   +                              IACG  H+A+VT  G LLTFG 
Sbjct: 174 PERLDVDDEVVC--------------------------IACGYYHTALVTAGGKLLTFGE 207

Query: 316 GLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              G+ G GS T D   P     + +  V  +A G  HTV I+    VY FG    GQLG
Sbjct: 208 TDEGKLGRGSDTGDNCLPKVVDGI-EGHVVSVACGGAHTVAIT-GWLVYTFGNGSSGQLG 265

Query: 375 TG--VDQAENVPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
            G  + QA+   K++ + P     + +  SCG  H+A++T+ GQ+ + G  ++G+L LG+
Sbjct: 266 HGNMLLQADTPHKIVWQKPT----KVRSASCGENHTALVTDRGQLWTCGDGRHGKLALGE 321

Query: 432 SIDRNIPSLVPIHG-----FLPRNIACGWWHTL 459
               N     P H      F+   ++CG  HTL
Sbjct: 322 ENFAN--QFKPCHSVRFSKFVVEQVSCGGCHTL 352



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 6/129 (4%)

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           + + +V  I+ G  HT  ++ +GRV+ FG N +GQLG G  +    P  +++  L++++ 
Sbjct: 22  IREDKVLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKS--LKAEKV 79

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF---LPRNIACG 454
             V+CG  H+ + TE G++ S+G N   QLGLG   D  + S   I G      + ++ G
Sbjct: 80  HQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLD-DEKVCSPTVIKGLESHAVKMLSAG 138

Query: 455 WWHTLLLAE 463
            +H+ +L +
Sbjct: 139 MYHSCVLTD 147


>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
          Length = 453

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 26/249 (10%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           + + G   +++++  +V+  G    G LGLGS                A SG + P  V 
Sbjct: 28  LGSAGNEAIVITNDDEVYSLGSNCSGCLGLGSD---------------AMSGLE-PRKVE 71

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS-YA 335
           Q          ++ V      G H    T+AG + ++G   Y Q G+GSTN    P+   
Sbjct: 72  Q-------LCKKNIVSFAYGSGPHVLATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTPVT 124

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
           SSL+  ++  IA G  H++ +S EG ++ +G N  GQ+G+G    +  P+ + T  + SK
Sbjct: 125 SSLLGKRITAIACGSHHSMALSSEGEIFAWGQNNCGQVGSGTTSNQPTPRKV-TACIGSK 183

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACG 454
           +   ++CG   S    + G+V  WG+N  GQLGLG++I++  P  LV ++      IACG
Sbjct: 184 KCISIACGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQPNPCRLVVLNNVFITQIACG 243

Query: 455 WWHTLLLAE 463
           + HTL L +
Sbjct: 244 YAHTLGLTD 252



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 33/214 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G +IT +A G  H++ LS  G+++ WG    GQ+G G+     PTP  +           
Sbjct: 129 GKRITAIACGSHHSMALSSEGEIFAWGQNNCGQVGSGTTSNQ-PTPRKV----------- 176

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                       +   G      IACG   S    D G +  +G+   GQ G G+  +Q 
Sbjct: 177 ------------TACIGSKKCISIACGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQP 224

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P     L ++ + QIA G  HT+ ++ EG +Y +G N +GQLGTG     N   ++   
Sbjct: 225 NPCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAWGANSYGQLGTG-----NKANMISPV 279

Query: 391 ILESKRAKVVSCGARH----SAVLTEDGQVLSWG 420
            +     + V   A H    SA LT+ G+V  WG
Sbjct: 280 RIAVDLGRFVEIAATHYNHLSAALTQAGKVFMWG 313



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 30/234 (12%)

Query: 213 KITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKD 270
            I   A G G H L  ++ G+V+ WG+ G  QLG GS  +   PTP              
Sbjct: 77  NIVSFAYGSGPHVLATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTP-------------- 122

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                    V SS    R  +  IACG  HS  ++  G +  +G    GQ G G+T++Q 
Sbjct: 123 ---------VTSSLLGKR--ITAIACGSHHSMALSSEGEIFAWGQNNCGQVGSGTTSNQP 171

Query: 331 RPSYASSLM-DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
            P   ++ +   +   IA G   ++     G V+ +G N  GQLG G +   N P     
Sbjct: 172 TPRKVTACIGSKKCISIACGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNI--NQPNPCRL 229

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
            +L +     ++CG  H+  LT++G + +WG N YGQLG G+  +   P  + +
Sbjct: 230 VVLNNVFITQIACGYAHTLGLTDEGSLYAWGANSYGQLGTGNKANMISPVRIAV 283



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 35/207 (16%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE---ASVVKAAAGWAHCVSV 119
            LAT+ +G++ +WG     G   L +G   + P P P+ +      +   A G  H +++
Sbjct: 89  VLATTNAGEVYSWG---HNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMAL 145

Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ---APPSDKRAGEEV 176
           +  GE++ WG   C          G  GS      G  S  PT +   A    K+     
Sbjct: 146 SSEGEIFAWGQNNC----------GQVGS------GTTSNQPTPRKVTACIGSKKCISIA 189

Query: 177 VKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
             +  + +A +  E              G+     +PC + +   V IT++A G  HTL 
Sbjct: 190 CGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQPNPCRLVVLNNVFITQIACGYAHTLG 249

Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           L+D G ++ WG    GQLG G++  M+
Sbjct: 250 LTDEGSLYAWGANSYGQLGTGNKANMI 276



 Score = 41.6 bits (96), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 6/141 (4%)

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLE 388
           L PS+ +++    V   A      + I+ +  VY  G N  G LG G D    + P+ +E
Sbjct: 14  LEPSFIATIRMACVLGSAGN--EAIVITNDDEVYSLGSNCSGCLGLGSDAMSGLEPRKVE 71

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGF 446
             + +            H    T  G+V SWG N Y QLG G +     P+ V   + G 
Sbjct: 72  Q-LCKKNIVSFAYGSGPHVLATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTPVTSSLLGK 130

Query: 447 LPRNIACGWWHTLLLAETTQI 467
               IACG  H++ L+   +I
Sbjct: 131 RITAIACGSHHSMALSSEGEI 151


>gi|363733282|ref|XP_420476.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Gallus gallus]
          Length = 560

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 97/172 (56%), Gaps = 4/172 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIAAG 349
           + +IACG  HS  ++  G+L T+G   +GQ G GS +  + +P     L  I + QIAAG
Sbjct: 85  IVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGIPLAQIAAG 144

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
             H+V +S+ G VY +G N FGQLG G  +  + P  +E   LE  +A  +SCG  H+AV
Sbjct: 145 GAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEA--LEHWKAVFISCGEDHTAV 202

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLL 460
           L+++G V ++G    GQLG   + +   P +V  + G     +ACG  HTL+
Sbjct: 203 LSKNGLVFTFGAGGAGQLGHNSTRNEFRPRMVAELWGARVSLVACGRQHTLV 254



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 114/232 (49%), Gaps = 30/232 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I ++A G  H++ LS  G ++ WG    GQLG+GS+  ++  P L+  L      K  PL
Sbjct: 85  IVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGL------KGIPL 138

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                              +IA GG HS VV+ +GA+ ++G   +GQ G G T D+  PS
Sbjct: 139 ------------------AQIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPS 180

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
           Y  +L   +   I+ G  HT  +S  G V+ FG    GQLG    + E  P+++    L 
Sbjct: 181 YVEALEHWKAVFISCGEDHTAVLSKNGLVFTFGAGGAGQLGHNSTRNEFRPRMVAE--LW 238

Query: 394 SKRAKVVSCGARHSAVLTED-GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
             R  +V+CG +H+ V      +V S+G +  GQLG     ++ IP  +PI+
Sbjct: 239 GARVSLVACGRQHTLVYVPSLDKVYSFG-SYEGQLGSERKANQLIP--LPIN 287



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 27/190 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P LV    G+ + ++AAGG H++++S  G V+ WG    GQLGLG   +    P  +  L
Sbjct: 127 PQLVKGLKGIPLAQIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLG-HTEDRDCPSYVEAL 185

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           EH  +                          I+CG  H+AV++  G + TFG G  GQ G
Sbjct: 186 EHWKA------------------------VFISCGEDHTAVLSKNGLVFTFGAGGAGQLG 221

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT-VCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           H ST ++ RP   + L   +V  +A G  HT V +    +VY FG  + GQLG+     +
Sbjct: 222 HNSTRNEFRPRMVAELWGARVSLVACGRQHTLVYVPSLDKVYSFGSYE-GQLGSERKANQ 280

Query: 382 NVPKLLETPI 391
            +P  + +P+
Sbjct: 281 LIPLPINSPV 290



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 4/129 (3%)

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV-DQAENVPKLLETPILESKR 396
           L +  + QIA G  H++ +S  G ++ +G N  GQLG G  D   + P+L++   L+   
Sbjct: 80  LENNDIVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKG--LKGIP 137

Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGW 455
              ++ G  HS V++  G V SWG N +GQLGLG + DR+ PS V  +  +    I+CG 
Sbjct: 138 LAQIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEHWKAVFISCGE 197

Query: 456 WHTLLLAET 464
            HT +L++ 
Sbjct: 198 DHTAVLSKN 206


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 30/258 (11%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           +K   V+ G  H+L +   G+V+ WG G EGQLG+G   ++  TP  I  L         
Sbjct: 75  LKFNLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIK----- 129

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQL 330
                              + +++CG  HS  ++    + ++G   +GQ G G   + Q 
Sbjct: 130 -------------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQA 170

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL---GTGVDQAENVPKLL 387
            P    SL  I V Q+AAG  H+  +S+ G  + +G N  GQL   G  V    N P  L
Sbjct: 171 SPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKP--L 228

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
               L++     +SCG  H+AVL++DG+V ++G N  GQLG   +  +  P +V     L
Sbjct: 229 SIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYNPTPKKRGPQIVERIDGL 288

Query: 448 PRNIACGWWHTLLLAETT 465
              I CG  HT+    TT
Sbjct: 289 VSQIDCGGDHTIAYVHTT 306



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
             +P  +T   G+KI +V+ G  H+L LS   QV+ WG    GQLGLG  +    +P  +
Sbjct: 116 NFTPKKITTLTGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRV 175

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY- 318
             LE                           V ++A GG HS  ++  G   +FGWG   
Sbjct: 176 RSLEGIP------------------------VAQVAAGGAHSFALSLCGT--SFGWGSNS 209

Query: 319 -GQCGHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ      N Q+   +P    +L ++ V  I+ G  HT  +S +G+V+ FG N  GQLG
Sbjct: 210 AGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLG 269

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+++E           + CG  H+ A +   GQV+S+G
Sbjct: 270 YNPTPKKRGPQIVERI---DGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H + +     V+  G N  GQLG       ++P+ ++   L++ +  +VS
Sbjct: 24  ELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQA--LKTLKFNLVS 81

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI--PSLVPIHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+  + N     +  + G     ++CG +H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGHYHSL 141

Query: 460 LLAETTQI 467
            L++ +Q+
Sbjct: 142 ALSKDSQV 149


>gi|330837408|ref|YP_004412049.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
           17374]
 gi|329749311|gb|AEC02667.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
           DSM 17374]
          Length = 742

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 118/260 (45%), Gaps = 25/260 (9%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           V++  V+AG  +T+IL   G +W  GY   GQLGLG           +P     A   + 
Sbjct: 354 VRVKSVSAGAYYTMILKTDGTLWATGYNYYGQLGLGDSGSGTNRSTPVPVTSMNADPSNP 413

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
            + +  GS+  +G A  S          H+ ++     L   G+  YG  G G+T ++  
Sbjct: 414 AVAISVGSLAYNGTAYLS----------HTMILKKDSTLWATGYNQYGSLGDGTTTNRST 463

Query: 332 P----SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           P      A   M   V+ ++AG++HT+ +  +G ++  G N FGQLG G    E      
Sbjct: 464 PVQVKDNAGGFM-TDVKAVSAGVYHTMILQKDGTLWATGRNNFGQLGVG----EANTYTT 518

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI---- 443
             P+        VS G  H+ +L  DG + + G+N +GQLG G   ++N P  V      
Sbjct: 519 SIPVQVMTDVAAVSAGNSHTIILKTDGTLWATGYNNFGQLGDGTMANKNTPVRVKDTTDG 578

Query: 444 HGFLPR--NIACGWWHTLLL 461
            GF+     ++ G +HT++L
Sbjct: 579 SGFMTDVAAVSAGAYHTMIL 598



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 28/224 (12%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           +  V+AG  HT+IL   G +W  GY   GQLG G+                  + K+ P+
Sbjct: 528 VAAVSAGNSHTIILKTDGTLWATGYNNFGQLGDGTM-----------------ANKNTPV 570

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
            V+     + G    + V  ++ G  H+ ++ + G L   G+   GQ G G+T ++  P 
Sbjct: 571 RVKD---TTDGSGFMTDVAAVSAGAYHTMILKNNGTLWATGFNSAGQLGDGTTTNRSTPV 627

Query: 334 YASSLMD-----IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
                 D       V  ++ G  HT+ +  +G ++  G N  G+LG G   ++N P  + 
Sbjct: 628 RVKDTTDGSGFMTDVAAVSVGNAHTMILKKDGTLWATGQNSDGRLGDGSTTSKNTPVQVS 687

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           +          VS G  H+ +L +D  + + G+N YGQLGLGDS
Sbjct: 688 S---MGADVAAVSAGENHTMILKKDLTLWATGYNYYGQLGLGDS 728



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 109/271 (40%), Gaps = 38/271 (14%)

Query: 202 SPCLVTLNPG---VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           +P  V  N G     +  V+AG  HT+IL   G +W  G    GQLG+G           
Sbjct: 463 TPVQVKDNAGGFMTDVKAVSAGVYHTMILQKDGTLWATGRNNFGQLGVG----------- 511

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
               E        P+ V               V  ++ G  H+ ++   G L   G+  +
Sbjct: 512 ----EANTYTTSIPVQVMTD------------VAAVSAGNSHTIILKTDGTLWATGYNNF 555

Query: 319 GQCGHGSTNDQLRPSYASSLMD-----IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
           GQ G G+  ++  P       D       V  ++AG +HT+ +   G ++  G N  GQL
Sbjct: 556 GQLGDGTMANKNTPVRVKDTTDGSGFMTDVAAVSAGAYHTMILKNNGTLWATGFNSAGQL 615

Query: 374 GTGVDQAENVPKLLETPILES---KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           G G     + P  ++     S        VS G  H+ +L +DG + + G N  G+LG G
Sbjct: 616 GDGTTTNRSTPVRVKDTTDGSGFMTDVAAVSVGNAHTMILKKDGTLWATGQNSDGRLGDG 675

Query: 431 DSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
            +  +N P  V   G     ++ G  HT++L
Sbjct: 676 STTSKNTPVQVSSMGADVAAVSAGENHTMIL 706


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 2/174 (1%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGG+H+ +VT  G   ++G    G+ GHG  ++   P    +L    +E +A G 
Sbjct: 314 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGE 373

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           +H+  +++ G +Y +G   FG LG G + +  VPK +   ++E      ++CG  H+AV+
Sbjct: 374 YHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNF-LMEGIHVSSIACGPYHTAVV 432

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           T  GQ+ ++G   +G LG GD     IP  V  + G      ACG WHT  + E
Sbjct: 433 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 486



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 128/299 (42%), Gaps = 47/299 (15%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A GG+H ++++  G+ + WG   EG+LG G     V  P LI  L     E  A
Sbjct: 312 LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN-VQHPKLIDALNTTNIELVA 370

Query: 267 SGKDRPLLVR-QGSVNSSGKAGRS-----------------------YVKEIACGGRHSA 302
            G+     V   G + + GK                           +V  IACG  H+A
Sbjct: 371 CGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTA 430

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI------ 356
           VVT AG L TFG G +G  GHG       P    SL  ++  + A G+WHT  +      
Sbjct: 431 VVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 490

Query: 357 ------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
                    G+++ +G     +LG G  + + VP  +   ++E    + V+CG   +  L
Sbjct: 491 SSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCV-AALVEPNFCQ-VACGHSLTVAL 548

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           T  G V + G   YGQLG     D  +P+ V   +H      IACG +H  +L   T++
Sbjct: 549 TTSGHVYTMGSPVYGQLG-NPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEV 606



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 40/260 (15%)

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
           L  G+ ++ +A G  HT +++  GQ++ +G G  G LG G R K V  P  +  L+    
Sbjct: 413 LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVFIPREVDSLK---- 467

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGW 315
                              G   V+  ACG  H+A V +             G L T+G 
Sbjct: 468 -------------------GLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 507

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           G   + GHG    +L P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG 
Sbjct: 508 GDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN 567

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
                + VP  ++  + +S   + ++CGA H AVLT   +V +WG    G+LG GD+ DR
Sbjct: 568 PHADGK-VPTRVDGKLHKS-FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDR 625

Query: 436 NIPSLV-PIHGFLPRNIACG 454
           N P+LV  +     ++IACG
Sbjct: 626 NSPTLVESLKDKQVKSIACG 645



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 4/142 (2%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S + + V+ IA G  H V ++ +G  + +G    G+LG GVD     PKL+
Sbjct: 299 DSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLI 358

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHG 445
           +   L +   ++V+CG  HS  +T  G + +WG   +G LG G+ +   +P  V   + G
Sbjct: 359 DA--LNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEG 416

Query: 446 FLPRNIACGWWHTLLLAETTQI 467
               +IACG +HT ++    Q+
Sbjct: 417 IHVSSIACGPYHTAVVTSAGQL 438



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 72/162 (44%), Gaps = 25/162 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G V+  G    GQLG         
Sbjct: 516 GDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG--------- 566

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            PH        A GK  P  V        GK  +S+V+EIACG  H AV+T    + T+G
Sbjct: 567 NPH--------ADGK-VPTRV-------DGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG 610

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  G+ GHG  +D+  P+   SL D QV+ IA G   T  +
Sbjct: 611 KGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 652


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 118/250 (47%), Gaps = 27/250 (10%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           +  VAAG  H+L L   G VW WG    GQLG G+    +    ++  +   A+G +  L
Sbjct: 448 VVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLVPVQVLSGVVAVAAGSNHSL 507

Query: 274 LVR-QGSVNSSGK--------------------AGRSYVKEIACGGRHSAVVTDAGALLT 312
            VR  G+V + G                      G S V  +A G  HS  V   G++  
Sbjct: 508 AVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLSGVAAVAAGSFHSLAVHSDGSVWA 567

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +G    G+ G G+T+++L P     L       +AAG +H++ +  +G V+ +G N FG+
Sbjct: 568 WGSNSSGELGDGTTSNRLVPGRVPGLSGGVA--VAAGGFHSLVVRSDGTVWTWGSNSFGE 625

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G   + +VP  ++   L    A  V  G  HS  +  DG V +WG+N YGQLG G +
Sbjct: 626 LGDGTTTSRSVP--VQVQGLSGVVA--VDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTT 681

Query: 433 IDRNIPSLVP 442
             R++P  VP
Sbjct: 682 TRRSVPVQVP 691



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 139/455 (30%), Positives = 186/455 (40%), Gaps = 82/455 (18%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G   +LA    G +  WG A+  GQ  L  G       P  +P  + VV  AAG AH ++
Sbjct: 204 GSSHSLAVLSDGSVWAWG-ANSSGQ--LGDGTKINRLVPVQVPGLSGVVAVAAGAAHSLA 260

Query: 119 VTEAGEVYTWGWR------------ECVP------SAKVTRDFGSAGSFQKDSTGKQSAL 160
           V   G V+TWG                VP      S  V  D GS  S    S G   A 
Sbjct: 261 VRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSGVVASDVGSYHSLALRSDGSVWAW 320

Query: 161 ------------PTEQAPPSDKR--AGEEVVKRRKTSSAREESENP--ASGDEFF----- 199
                        T ++ P   R  +G   V    + S    S+    A G  F      
Sbjct: 321 GHNSSGQLGDDSSTSRSVPVQVRGLSGGMAVTAGSSHSLAVGSDGTVWAWGSNFSGERGE 380

Query: 200 -----TLSPCLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
                  SP  V  L  GV    VAAG  H+L     G VW WG    GQLG G+  +  
Sbjct: 381 GTTNNRASPVQVQGLGGGV---AVAAGFNHSLAARSDGSVWAWGSNDSGQLGDGT-TRNS 436

Query: 254 PTPHLIPCLE---HAASGKDRPLLVR-QGSV-----NSSGKAGR-------------SYV 291
            +P  +  L      A+G D  L +R  GSV     N+ G+ G              S V
Sbjct: 437 TSPVQVQGLSGVVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLVPVQVLSGV 496

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
             +A G  HS  V   G + T+G  LYGQ G G+T+++L P     L    V  +AAG +
Sbjct: 497 VAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLSG--VAAVAAGSF 554

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           H++ +  +G V+ +G N  G+LG G      VP     P L    A  V+ G  HS V+ 
Sbjct: 555 HSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPG--RVPGLSGGVA--VAAGGFHSLVVR 610

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
            DG V +WG N +G+LG G +  R++P  V + G 
Sbjct: 611 SDGTVWTWGSNSFGELGDGTTTSRSVP--VQVQGL 643



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 178/439 (40%), Gaps = 56/439 (12%)

Query: 22  VYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS--A 78
           V+ WG+   G   + S     +P ++ G      V  G    +LA    G +  WGS  +
Sbjct: 317 VWAWGHNSSGQLGDDSSTSRSVPVQVRGLSGGMAVTAGSS-HSLAVGSDGTVWAWGSNFS 375

Query: 79  DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
            + G+     G       P  +      V  AAG+ H ++    G V+ WG         
Sbjct: 376 GERGE-----GTTNNRASPVQVQGLGGGVAVAAGFNHSLAARSDGSVWAWG--------- 421

Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GEEVVKRRKTSSAREESENPAS 194
            + D G  G    D T + S  P +    S   A     +  +  R   S      N   
Sbjct: 422 -SNDSGQLG----DGTTRNSTSPVQVQGLSGVVAVAAGFDHSLALRSDGSVWAWGSNAYG 476

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMV 253
                T +  LV +     +  VAAG  H+L +   G VW WG    GQLG G+   ++V
Sbjct: 477 QLGEGTTTNRLVPVQVLSGVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLV 536

Query: 254 PTP-HLIPCLEHAASGKDRPLLVR-QGSV-----NSSGKAGRSYVKE------------- 293
           P     +  +   A+G    L V   GSV     NSSG+ G                   
Sbjct: 537 PVQVQGLSGVAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPGRVPGLSGG 596

Query: 294 --IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
             +A GG HS VV   G + T+G   +G+ G G+T  +  P     L    V  + AG  
Sbjct: 597 VAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQGLSG--VVAVDAGNS 654

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           H++ +  +G V+ +G N +GQLG G     +VP  ++ P L    A  ++ GA H  V+ 
Sbjct: 655 HSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVP--VQVPGLSGVVA--MATGALHPLVVR 710

Query: 412 EDGQVLSWGWNKYGQLGLG 430
            DG V +WG+N +GQLG G
Sbjct: 711 SDGTVWAWGYNSFGQLGNG 729



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 152/390 (38%), Gaps = 64/390 (16%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G  ++LA    G +  WGS +  GQ  L  G       P  +P  + VV  AAG +H ++
Sbjct: 154 GSSYSLAVRSDGTVWAWGS-NFSGQ--LGDGTTSNRLVPVQVPGLSGVVSVAAGSSHSLA 210

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           V   G V+ WG              G  G   K +      +P      +        + 
Sbjct: 211 VLSDGSVWAWG----------ANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAAHSLA 260

Query: 179 RRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
            R   +      N       G +   L P  V    GV  + V  G  H+L L   G VW
Sbjct: 261 VRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSGVVASDV--GSYHSLALRSDGSVW 318

Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
            WG+   GQLG                 + +++ +  P+ VR          G S    +
Sbjct: 319 AWGHNSSGQLG-----------------DDSSTSRSVPVQVR----------GLSGGMAV 351

Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE------QIAA 348
             G  HS  V   G +  +G    G+ G G+TN++  P        +QV+       +AA
Sbjct: 352 TAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRASP--------VQVQGLGGGVAVAA 403

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G  H++    +G V+ +G N  GQLG G  +    P  ++   L    A  V+ G  HS 
Sbjct: 404 GFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTSP--VQVQGLSGVVA--VAAGFDHSL 459

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
            L  DG V +WG N YGQLG G + +R +P
Sbjct: 460 ALRSDGSVWAWGSNAYGQLGEGTTTNRLVP 489



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 111/254 (43%), Gaps = 37/254 (14%)

Query: 210 PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           PG+  +  VAAG  H+L +   G VW WG   +GQLG G+      T  L P      SG
Sbjct: 93  PGLSGVVAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGT-----TTMRLTPVRVQGLSG 147

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 V  +A G  +S  V   G +  +G    GQ G G+T++
Sbjct: 148 ----------------------VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSN 185

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           +L P     L    V  +AAG  H++ +  +G V+ +G N  GQLG G      VP  ++
Sbjct: 186 RLVPVQVPGLSG--VVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVP--VQ 241

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
            P L    A        HS  +  DG V +WG N +GQLG G   DR +P  V  + G +
Sbjct: 242 VPGLSGVVAVAAGA--AHSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSGVV 299

Query: 448 PRNIACGWWHTLLL 461
             ++    +H+L L
Sbjct: 300 ASDVGS--YHSLAL 311



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 99/227 (43%), Gaps = 33/227 (14%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           ++AAG  ++L L   G VW  G    GQLG G+       P  +P L             
Sbjct: 50  RLAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNH-SAPVQVPGL------------- 95

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                        S V  +A G  HS  V   G +  +G    GQ G G+T  +L P   
Sbjct: 96  -------------SGVVAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRV 142

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
             L    V  +AAG  +++ +  +G V+ +G N  GQLG G      VP  ++ P L   
Sbjct: 143 QGLSG--VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVP--VQVPGLSGV 198

Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            +  V+ G+ HS  +  DG V +WG N  GQLG G  I+R +P  VP
Sbjct: 199 VS--VAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQVP 243



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 179/460 (38%), Gaps = 81/460 (17%)

Query: 40  SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           +P  ARL  G S          ++LA    G +   GS +D GQ  L  G       P  
Sbjct: 45  APSRARLAAGSS----------YSLALRPDGTVWATGS-NDLGQ--LGDGTTTNHSAPVQ 91

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           +P  + VV  AAG +H ++V   G V+ WG               S G     +T     
Sbjct: 92  VPGLSGVVAVAAGSSHSLAVRHDGTVWAWG-------------SNSDGQLGDGTT----- 133

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSS----AREESENPASGDEFF------TLSPCLVTLN 209
             T +  P   +    VV     SS     R +    A G  F       T S  LV + 
Sbjct: 134 --TMRLTPVRVQGLSGVVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVPVQ 191

Query: 210 -PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAA 266
            PG+  +  VAAG  H+L +   G VW WG    GQLG G++I ++VP    +P L    
Sbjct: 192 VPGLSGVVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQ--VPGLSGVV 249

Query: 267 SGKD---RPLLVR-QGSV-----NSSGKAGR---------------SYVKEIACGGRHSA 302
           +        L VR  G+V     NS G+ G                S V     G  HS 
Sbjct: 250 AVAAGAAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSGVVASDVGSYHSL 309

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +   G++  +G    GQ G  S+  +  P     L       + AG  H++ +  +G V
Sbjct: 310 ALRSDGSVWAWGHNSSGQLGDDSSTSRSVPVQVRGLSGGMA--VTAGSSHSLAVGSDGTV 367

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           + +G N  G+ G G       P  ++   L    A  V+ G  HS     DG V +WG N
Sbjct: 368 WAWGSNFSGERGEGTTNNRASP--VQVQGLGGGVA--VAAGFNHSLAARSDGSVWAWGSN 423

Query: 423 KYGQLGLGDSIDRNIPSLVPIHGFL-PRNIACGWWHTLLL 461
             GQ  LGD   RN  S V + G      +A G+ H+L L
Sbjct: 424 DSGQ--LGDGTTRNSTSPVQVQGLSGVVAVAAGFDHSLAL 461



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 93/247 (37%), Gaps = 27/247 (10%)

Query: 10  ENEKMEECKETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
            N  +    +  V+ WG  L G   + +     +P ++ G      V  G    +LA   
Sbjct: 503 SNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLSGVAAVAAGSF-HSLAVHS 561

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
            G +  WGS +  G+  L  G       P  +P  +  V  AAG  H + V   G V+TW
Sbjct: 562 DGSVWAWGS-NSSGE--LGDGTTSNRLVPGRVPGLSGGVAVAAGGFHSLVVRSDGTVWTW 618

Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE------VVKRRKT 182
           G          +  FG  G    D T    ++P +    S   A +        V+   T
Sbjct: 619 G----------SNSFGELG----DGTTTSRSVPVQVQGLSGVVAVDAGNSHSLAVRSDGT 664

Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGE 241
                 +     GD   T     V + PG+  +  +A G  H L++   G VW WGY   
Sbjct: 665 VWTWGYNSYGQLGDGTTTRRSVPVQV-PGLSGVVAMATGALHPLVVRSDGTVWAWGYNSF 723

Query: 242 GQLGLGS 248
           GQLG GS
Sbjct: 724 GQLGNGS 730


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 120/259 (46%), Gaps = 46/259 (17%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           GV+++ VA G  HT++++  GQ++ +G G  G LG G R K    P  +  L+   + + 
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDR-KSASMPREVESLKGLKTLR- 286

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD------------AGALLTFGWGLY 318
                                   ACG  H+A V +            +G L T+G G  
Sbjct: 287 -----------------------AACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDK 323

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG--TG 376
            + GHG    +L P+  ++L+D    Q+A G   TV ++  G +Y  G   +GQLG    
Sbjct: 324 NRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQA 383

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
             +   V +L  T I E      VSCGA H A LT  G V +WG    G+LG GD+ DR+
Sbjct: 384 TGRLPGVLRLGRTLIEE------VSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRD 437

Query: 437 IPSLV-PIHGFLPRNIACG 454
           +P+LV  +     + ++CG
Sbjct: 438 VPTLVEALRDKQVKKVSCG 456



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++IACG RH+A+VT  G + ++G    G+ GHG   D   P    SL    V+ +A G 
Sbjct: 125 VQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGE 184

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +H+  ++  G +Y +G   + FG LG G   +   PK +  P LE  R   V+CG  H+ 
Sbjct: 185 YHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGP-LEGVRVSSVACGPWHTV 243

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           ++T  GQ+ S+G   +G LG GD    ++P  V  + G      ACG WHT  + E
Sbjct: 244 LVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVE 299



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D   P    SL+ + V+QIA G+ HT  ++ +G V+ +G    G+LG GVD     P+L+
Sbjct: 110 DAFLPRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLI 169

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV--PI 443
           ++  L S   + V+CG  HS  +T+ G + +WG   + +G LG G+SI    P  V  P+
Sbjct: 170 DS--LASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPL 227

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G    ++ACG WHT+L+  T Q+
Sbjct: 228 EGVRVSSVACGPWHTVLVTSTGQL 251



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 154/362 (42%), Gaps = 71/362 (19%)

Query: 54  DVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVK 108
           DV    CG    AL T + G++ +WG   +E    L  G   +   P  + + AS  V  
Sbjct: 124 DVQQIACGVRHTALVTRQ-GEVFSWG---EESGGRLGHGVDADVAHPQLIDSLASSTVQY 179

Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS--TGKQSALPTEQAP 166
            A G  H  +VT++G++YTWG          T +FG  G     S  T K+   P E   
Sbjct: 180 VACGEYHSCAVTQSGDLYTWG--------DGTHNFGLLGHGNSISHWTPKRVGGPLEGVR 231

Query: 167 PSDKRAG--EEVVKRRKTSSAREESENPAS------GDEFFTLSPCLVTLNPGVKITKVA 218
            S    G    V+    TS+ +  S    +      GD      P  V    G+K  + A
Sbjct: 232 VSSVACGPWHTVLV---TSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAA 288

Query: 219 AGGRHTLILSDM------------GQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEH- 264
            G  HT  + ++            G+++ WG G + +LG G +  K+VPT  +   ++H 
Sbjct: 289 CGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTC-VAALVDHN 347

Query: 265 ---AASGKDRPL-------LVRQGSVN--------SSGKA------GRSYVKEIACGGRH 300
               A G    +       L   GSV+        ++G+       GR+ ++E++CG  H
Sbjct: 348 FRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRLPGVLRLGRTLIEEVSCGAYH 407

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT--VCISV 358
            A +T  G + T+G G  G+ GHG   D+  P+   +L D QV++++ G   T  +C+  
Sbjct: 408 VAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAICLHK 467

Query: 359 EG 360
            G
Sbjct: 468 SG 469


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 134/291 (46%), Gaps = 42/291 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--------SRIKMVPTPH--LIP 260
           GV++ + A+G RH+L+L   GQV   G  G GQLG           RI+ + T H  L+ 
Sbjct: 22  GVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVS 81

Query: 261 CLEHAASGKDRPLLV-RQGSV-----NSSGKAGRS------------------YVKEIAC 296
           C      GK+  L V  +G V      S G+ G                     +K+++C
Sbjct: 82  C------GKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSC 135

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           G  HS  +++ G + ++G    GQ G G     Q  P    SL  I + Q+AAG  H+  
Sbjct: 136 GHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFA 195

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
           +S+ G  + +G N  GQL    +       K      L++     +SCG  H+ VLT++G
Sbjct: 196 LSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNG 255

Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETT 465
           +V ++G N YGQLG   + +++ P LV     L   I CG +HTL    TT
Sbjct: 256 KVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQIDCGSYHTLAYVYTT 306



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 88/192 (45%), Gaps = 34/192 (17%)

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IP 260
           TLN  +KI +V+ G  H+L LS+ GQV+ WG   +GQLGLG +     +P        IP
Sbjct: 124 TLN-DIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIP 182

Query: 261 CLEHAASGKDRPLLVRQGSV----------------NSSGKAGRSY---------VKEIA 295
             + AA G     L   G+                 N SG++ + Y         V  I+
Sbjct: 183 LAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYIS 242

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
           CG  H+ V+T  G + TFG   YGQ GH  T ++  P     + D  V QI  G +HT+ 
Sbjct: 243 CGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGI-DGLVSQIDCGSYHTLA 301

Query: 356 -ISVEGRVYVFG 366
            +   G+V  FG
Sbjct: 302 YVYTTGKVVSFG 313



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 4/129 (3%)

Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
           +++ Q A+G  H++ +   G+V+  G N  GQLG     A    +L     LE+    +V
Sbjct: 23  VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQ--RGAPCSAQLKRIRALETLHVDLV 80

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLVP-IHGFLPRNIACGWWHT 458
           SCG  HS  +   G+V +WG    GQLG G+  + N IP  +  ++    + ++CG +H+
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHS 140

Query: 459 LLLAETTQI 467
           L L+E  Q+
Sbjct: 141 LALSEGGQV 149



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 123/316 (38%), Gaps = 55/316 (17%)

Query: 54  DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEASVVKAA 110
           D+   G   +LA    G++  WG A  EGQ  L +G+  ET   P       +  + + +
Sbjct: 78  DLVSCGKEHSLAVCHKGRVFAWG-AGSEGQ--LGTGEFKETNLIPMKIKTLNDIKIKQVS 134

Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP--- 167
            G  H ++++E G+V++WG         + + F S  S Q+        +P  Q      
Sbjct: 135 CGHYHSLALSEGGQVFSWG-SNSDGQLGLGKKFPSQASPQR--VRSLDGIPLAQVAAGGA 191

Query: 168 ---SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
              +   +G      R  +      +N  SG  +    P  ++    + +  ++ G  HT
Sbjct: 192 HSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSY---KPYSISALKNLGVIYISCGYEHT 248

Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
           ++L+  G+V+ +G    GQLG        PT           + K  P LV        G
Sbjct: 249 VVLTQNGKVFTFGDNTYGQLGHS------PT-----------AEKSGPQLVE-------G 284

Query: 285 KAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY--------A 335
             G   V +I CG  H+ A V   G +++FG      C    T+ +             A
Sbjct: 285 IDG--LVSQIDCGSYHTLAYVYTTGKVVSFGRE--PTCKSSPTHPEALTENVDFTCLISA 340

Query: 336 SSLMDIQVEQIAAGLW 351
             L+D QV+ I AG +
Sbjct: 341 DDLVDFQVKHIFAGTY 356


>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
 gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
          Length = 477

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 104/240 (43%), Gaps = 27/240 (11%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P  V L  G  +T +AAG  H+L ++  G    WG    G+LG G+  +          
Sbjct: 147 TPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTTR---------- 196

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                  +D P+ V          AG + V  IA G  HS  +T AG +LT+G    GQ 
Sbjct: 197 -------RDTPVDVDL-------PAG-TTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQL 241

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           G G+T D   P          V  IAAG  H++ ++  G +  +G N  GQLG G     
Sbjct: 242 GDGTTTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGDGTTTNS 301

Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
           + P  +  P   S     +  G  HS  +T  G  L+WG N  GQLG G + + + P  V
Sbjct: 302 STPIAVNLP--ASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAV 359



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 152/383 (39%), Gaps = 52/383 (13%)

Query: 69  SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
           S  ++ WG   D G+    +     TP    LP   ++   AAG  H ++VT AG    W
Sbjct: 71  SDTVLAWGDNKD-GELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAW 129

Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR-----AGEE---VVKRR 180
           G             FG  G    D +   S+ P     P+        AG++    V   
Sbjct: 130 GNNL----------FGQLG----DGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSA 175

Query: 181 KTSSAREESENPASGDEFFTL--SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
            T+ A  +++    GD   T   +P  V L  G  +T +AAG  H+L L+  G V  WG 
Sbjct: 176 GTALAWGDNDRGELGDGTTTRRDTPVDVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGL 235

Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
             +GQLG G+                       P+ V          AG + V  IA G 
Sbjct: 236 NSDGQLGDGTTTD-----------------SSTPIAVDL-------PAG-TTVTAIAAGS 270

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            HS  VT AG +L +G    GQ G G+T +   P   +      +  I  G  H++ ++ 
Sbjct: 271 LHSLAVTTAGTILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTS 330

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
            G    +G N  GQLG G     + P  +  P          + G+ HS  +T  G +L+
Sbjct: 331 AGSALAWGDNDDGQLGDGTTTNSSTPIAVNLP--ADTTVTATTAGSLHSLAVTTAGTILA 388

Query: 419 WGWNKYGQLGLGDSIDRNIPSLV 441
           WG N  G+LG G + + + P  V
Sbjct: 389 WGNNSDGRLGDGTTTNSSTPIAV 411



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 80/172 (46%), Gaps = 3/172 (1%)

Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
           + +  IA G  HS  VT AG  L +G  L+GQ G GST D   P          V  IAA
Sbjct: 105 TTITAIAAGHDHSLAVTSAGTALAWGNNLFGQLGDGSTTDSSTPIAVDLPAGTTVTAIAA 164

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           G  H++ ++  G    +G N  G+LG G     + P  ++ P         ++ G  HS 
Sbjct: 165 GDDHSLAVTSAGTALAWGDNDRGELGDGTTTRRDTPVDVDLP--AGTTVTAIAAGIGHSL 222

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTL 459
            LT  G VL+WG N  GQLG G + D + P  V +  G     IA G  H+L
Sbjct: 223 ALTSAGTVLTWGLNSDGQLGDGTTTDSSTPIAVDLPAGTTVTAIAAGSLHSL 274



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 124/351 (35%), Gaps = 83/351 (23%)

Query: 40  SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
           +PI   L  G +   +  G    +LA + +G  + WG  +D G+    +    +TP    
Sbjct: 147 TPIAVDLPAGTTVTAIAAGD-DHSLAVTSAGTALAWGD-NDRGELGDGTTTRRDTPVDVD 204

Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
           LP   +V   AAG  H +++T AG V TWG                              
Sbjct: 205 LPAGTTVTAIAAGIGHSLALTSAGTVLTWGLN---------------------------- 236

Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
                   SD + G+       T                    P  V L  G  +T +AA
Sbjct: 237 --------SDGQLGDGTTTDSST--------------------PIAVDLPAGTTVTAIAA 268

Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
           G  H+L ++  G +  WG   +GQLG G+                       P+ V    
Sbjct: 269 GSLHSLAVTTAGTILAWGNNSDGQLGDGTTTN-----------------SSTPIAVNL-- 309

Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
                    + +  I  G  HS  VT AG+ L +G    GQ G G+T +   P   +   
Sbjct: 310 ------PASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVNLPA 363

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
           D  V    AG  H++ ++  G +  +G N  G+LG G     + P  +  P
Sbjct: 364 DTTVTATTAGSLHSLAVTTAGTILAWGNNSDGRLGDGTTTNSSTPIAVNLP 414



 Score = 38.1 bits (87), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 6/99 (6%)

Query: 31  TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
           T+   +PI   +PA      +      GG   +LA + +G  + WG  DD GQ    +  
Sbjct: 298 TTNSSTPIAVNLPAS-----TTITAIDGGRDHSLAVTSAGSALAWGDNDD-GQLGDGTTT 351

Query: 91  HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
           +  TP    LP + +V    AG  H ++VT AG +  WG
Sbjct: 352 NSSTPIAVNLPADTTVTATTAGSLHSLAVTTAGTILAWG 390


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 119/256 (46%), Gaps = 26/256 (10%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           V I  V+ G  H++ +   G+V+ WG G EGQLG+G   ++   P  I  L         
Sbjct: 73  VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--------- 123

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQL 330
                         AG   + +++CG  HS  +++ G + ++G    GQ G G+    Q 
Sbjct: 124 --------------AGIKII-QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQA 168

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLET 389
            P    SL  I + Q+AAG  H+  +S+ G  + +G N+ GQL  +G    E + K    
Sbjct: 169 SPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSI 228

Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
             L++     +SCG  H++VLTEDGQV ++G +   QL       R  P L+   G    
Sbjct: 229 GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVS 288

Query: 450 NIACGWWHTLLLAETT 465
            I CG +HT+    TT
Sbjct: 289 QIECGSYHTIAYVYTT 304



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 33/263 (12%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+K+ K A+G RH+L+L    +V+  G    GQLG                 + +     
Sbjct: 20  GLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLG-----------------QKSPQSTK 62

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-Q 329
           RP  ++  S          ++  ++CG  HS  V   G + T+G G  GQ G G + +  
Sbjct: 63  RPEPIQALST--------VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS 114

Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ-AENVPKLLE 388
             P+  +SL  I++ Q++ G +H++ +S +G+V+ +G N+ GQLG G +  ++  P+ ++
Sbjct: 115 FMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVK 174

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRNIPSLVPIHGFL 447
           +  LE      V+ G  HS  L+  G    WG N+ GQL L G+S    I     I    
Sbjct: 175 S--LEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALK 232

Query: 448 PRN---IACGWWHTLLLAETTQI 467
             N   I+CG+ HT +L E  Q+
Sbjct: 233 TLNVVYISCGYEHTSVLTEDGQV 255



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 35/228 (15%)

Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
            +  P  +    G+KI +V+ G  H+L LS+ GQV+ WG   +GQLGLG+ +    +P  
Sbjct: 113 ISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQK 172

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG-- 316
           +  LE        PL                   ++A GG HS  ++  G   +FGWG  
Sbjct: 173 VKSLE------GIPL------------------AQVAAGGTHSFALSLMGT--SFGWGNN 206

Query: 317 LYGQC---GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
             GQ    G+ +     +P    +L  + V  I+ G  HT  ++ +G+V+ FGG+   QL
Sbjct: 207 RSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL 266

Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                     P+L+E           + CG+ H+ A +   GQV+S G
Sbjct: 267 QHSPRSGRGGPQLIEGI---GGHVSQIECGSYHTIAYVYTTGQVVSLG 311



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 138/367 (37%), Gaps = 120/367 (32%)

Query: 26  GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
           G L   SP+ +    PI A         D+   G   ++A    G++ TWG A  EGQ  
Sbjct: 51  GQLGQKSPQSTKRPEPIQAL---STVHIDLVSCGKEHSVAVCHQGRVFTWG-AGSEGQLG 106

Query: 86  LTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
           +     GE+ E   +PT+ +      +++ + G  H ++++E G+V++W           
Sbjct: 107 I-----GESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSW----------- 150

Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF 199
                  GS ++   G  + L ++ +P           ++ K+      ++  A G   F
Sbjct: 151 -------GSNRQGQLGLGNNLCSQASP-----------QKVKSLEGIPLAQVAAGGTHSF 192

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL--GSRIKMVPTPH 257
            LS                           MG  +GWG    GQL L   S  + +  PH
Sbjct: 193 ALSL--------------------------MGTSFGWGNNRSGQLALSGNSAKEQIYKPH 226

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
            I  L+               ++N         V  I+CG  H++V+T+ G + TFG   
Sbjct: 227 SIGALK---------------TLN---------VVYISCGYEHTSVLTEDGQVFTFG--- 259

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQ--------VEQIAAGLWHTVCISVEGRVYVFGGNQ 369
                 GS+++QL+ S  S     Q        V QI  G +HT+        YV+   Q
Sbjct: 260 ------GSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTI-------AYVYTTGQ 306

Query: 370 FGQLGTG 376
              LG G
Sbjct: 307 VVSLGRG 313


>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Ailuropoda melanoleuca]
          Length = 1011

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
           C+  L P  K+   A G  HTL+ ++ G+V+  G   EGQLGLG   +   + HLI    
Sbjct: 90  CVKALKPE-KVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDER-NSFHLISFFT 147

Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
                 + +A       L   G +     NS G+ G   +                 I+C
Sbjct: 148 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWISC 207

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCG---HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           G  HSA VT  G L TFG    G+ G       N ++  S     +  +V Q+A G  HT
Sbjct: 208 GYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPG--IPEKVVQVACGGGHT 265

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E  VPK++E   ++  +   + CG  H+A++T+
Sbjct: 266 VVLT-EKAVYTFGLGQFGQLGLGTFLFETPVPKVIEH--IKDLKISSIFCGENHTALITD 322

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  ++  P+L      F+ + +ACG  HTL+ A
Sbjct: 323 LGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVFA 375



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+A+VT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 50  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 109

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G+VY  GGN  GQLG G     N   L+ +     ++ K +S G+  SA LTED
Sbjct: 110 LVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLI-SFFTSQRKIKQLSAGSNTSAALTED 168

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V + G     I+CG++H+  + 
Sbjct: 169 GELFMWGDNSEGQIGLKNITNVCVPQQVTV-GKPISWISCGYYHSAFVT 216



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 36/278 (12%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  HT I++   +++ +G    GQLGLGS+   V  P  +  L     + AA G++ 
Sbjct: 50  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSK-STVNKPTCVKALKPEKVKFAACGRNH 108

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                  +  +K+++ G   SA +T+ 
Sbjct: 109 TLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTED 168

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  +  +   P   +  +   +  I+ G +H+  ++ EG +Y FG 
Sbjct: 169 GELFMWGDNSEGQIGLKNITNVCVPQQVT--VGKPISWISCGYYHSAFVTTEGELYTFGE 226

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
            + G+LG       N       P +  K  + V+CG  H+ VLTE   V ++G  ++GQL
Sbjct: 227 PESGKLGLPKQLLVNHRMPQSVPGIPEKVVQ-VACGGGHTVVLTEKA-VYTFGLGQFGQL 284

Query: 428 GLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           GLG  + +  +P ++  I      +I CG  HT L+ +
Sbjct: 285 GLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITD 322


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 126/245 (51%), Gaps = 15/245 (6%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++  V+ G  HT +++ MGQ++ +G G  G LG G  +K V  P  +  L    SG  
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGD-LKSVSYPREVESL----SGL- 236

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
           + + V  G  +++       + E+      S+V   AG L T+G G   + GHG    +L
Sbjct: 237 KTIAVACGVWHTAA------IVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRL 290

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
           +P+  ++L+D    ++A G   TV ++  G+V   G   +GQLG        +P L+E  
Sbjct: 291 KPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGR-IPCLVEDK 349

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPR 449
           I+  ++   ++CG+ H AVLT   +V +WG    G+LG GD  DR +P+LV +      R
Sbjct: 350 IV-GEQVIQIACGSYHVAVLTGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVR 408

Query: 450 NIACG 454
            IACG
Sbjct: 409 YIACG 413



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  + CG +H+A+V   G + T+G    G+ GHG+  D +RP    SL    V+ +A G 
Sbjct: 79  VYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGE 138

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  ++  G +Y +G   +  G LG G D    +PK + +  LE  +   VSCG  H+A
Sbjct: 139 FHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRV-SGALEGLQVAYVSCGTWHTA 197

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           ++T  GQ+ ++G   +G LG GD    + P  V  + G     +ACG WHT  + E
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAIVE 253



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 127/284 (44%), Gaps = 50/284 (17%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P  +  N  + +  V  G +H  ++   G+V+ WG    G+LG G+R   V       
Sbjct: 66  LLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCV------- 118

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY-- 318
                     RP LV   +V        S V  +ACG  H+  VT  G L ++G G +  
Sbjct: 119 ----------RPRLVESLTV--------SNVDFVACGEFHTCAVTTTGELYSWGDGTHNV 160

Query: 319 GQCGHGSTNDQLRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           G  GHG+      P   S  ++ +QV  ++ G WHT  I+  G+++ FG   FG LG G 
Sbjct: 161 GLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGD 220

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTE-------------DGQVLSWGWNKY 424
            ++ + P+ +E+  L   +   V+CG  H+A + E              G++ +WG    
Sbjct: 221 LKSVSYPREVES--LSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDK 278

Query: 425 GQLGLGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLLLAETT 465
            +LG GD   R  P+ V     H F    +ACG  H+L +A TT
Sbjct: 279 HRLGHGDKETRLKPTCVATLIDHDFY--RVACG--HSLTVALTT 318



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 119/284 (41%), Gaps = 44/284 (15%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE--GQLGLGSRIKMVPTPHL 258
           + P LV       +  VA G  HT  ++  G+++ WG G    G LG G+ +      H 
Sbjct: 118 VRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVG-----HW 172

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           IP                      SG      V  ++CG  H+A++T  G L TFG G +
Sbjct: 173 IP-------------------KRVSGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSF 213

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI----------SVE---GRVYVF 365
           G  GHG       P    SL  ++   +A G+WHT  I          SV+   G+++ +
Sbjct: 214 GVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTW 273

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G     +LG G  +    P  + T I        V+CG   +  LT  GQVLS G   YG
Sbjct: 274 GDGDKHRLGHGDKETRLKPTCVATLI--DHDFYRVACGHSLTVALTTSGQVLSMGNAVYG 331

Query: 426 QLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           QLG   S D  IP LV   I G     IACG +H  +L    ++
Sbjct: 332 QLGNPHS-DGRIPCLVEDKIVGEQVIQIACGSYHVAVLTGRNEV 374



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S + + V  +  G+ H   +   G V+ +G +  G+LG G  +    P+L+
Sbjct: 64  DILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLV 123

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSW--GWNKYGQLGLGDSIDRNIPSLV--PI 443
           E+  L       V+CG  H+  +T  G++ SW  G +  G LG G+ +   IP  V   +
Sbjct: 124 ES--LTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGAL 181

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G     ++CG WHT L+    Q+
Sbjct: 182 EGLQVAYVSCGTWHTALITSMGQL 205



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 64/166 (38%), Gaps = 33/166 (19%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  GQV   G    GQLG         
Sbjct: 284 GDKETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLG--------- 334

Query: 255 TPH---LIPCL-EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
            PH    IPCL E    G+                     V +IACG  H AV+T    +
Sbjct: 335 NPHSDGRIPCLVEDKIVGEQ--------------------VIQIACGSYHVAVLTGRNEV 374

Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            T+G G  G+ GHG   D+  P+    L D  V  IA G   T  I
Sbjct: 375 FTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIACGANFTAAI 420


>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 985

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 97/203 (47%), Gaps = 28/203 (13%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ + +++AGG H+ +LS  G V+GWG    GQLGLG       T   +P +  + SGK 
Sbjct: 170 GIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGD-----TTDRFVPTIVKSLSGKK 224

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                                  I+CGG H+A ++  G + TFG G +GQ GH S  D+ 
Sbjct: 225 --------------------TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEH 264

Query: 331 RPSYASSLMDIQVEQIAAGLWHT-VCISVEGRVYVFGGNQFGQLGTG--VDQAENVPKLL 387
            P   + L   +V Q+  G  HT V +++  R+Y FG    GQLG G  V Q+  +P LL
Sbjct: 265 HPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPVLL 324

Query: 388 ETPILESKRAKVVSCGARHSAVL 410
            T        + +  G +HS  L
Sbjct: 325 PTDCNCEFTMEKIIAGEKHSFAL 347



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 35/255 (13%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
             K+ ++A G +H++ LS+ GQ++ WG    GQLGL     ++ +P      +H  S   
Sbjct: 117 NTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSP------QHLQSLCG 170

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTND 328
            P                  V +I+ GG HS V++ +G +  FGWG    GQ G G T D
Sbjct: 171 IP------------------VAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDTTD 210

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
           +  P+   SL   +   I+ G  HT  +S  G V+ FG   FGQLG    + E+ P+L+ 
Sbjct: 211 RFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVA 270

Query: 389 TPILESKRAKVVSCGARHSAVLTE-DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
              L   +   V+CG  H+ VL     ++ S+G    GQLG G+ + +++P  +P+   L
Sbjct: 271 E--LWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVP--LPV--LL 324

Query: 448 PRNIACGWWHTLLLA 462
           P +  C +    ++A
Sbjct: 325 PTDCNCEFTMEKIIA 339



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 101/207 (48%), Gaps = 30/207 (14%)

Query: 268 GKDRPLLVRQGSVNSSGKAG-----RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
           GK   L +R    N  GK       R  ++ I CG   + ++ D G +L      Y  C 
Sbjct: 53  GKVSVLRLRDEDCNQDGKLKQLDLKREKIRSIVCGEDGAVLLADGGKVLLMDK--YTVC- 109

Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA-- 380
                   RP     L + +V QIA G  H+V +S +G+++V+G N  GQLG   +QA  
Sbjct: 110 --------RP--LKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALI 159

Query: 381 ---ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
              +++  L   P+ +      +S G  HS VL+  G V  WG N  GQLGLGD+ DR +
Sbjct: 160 QSPQHLQSLCGIPVAQ------ISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFV 213

Query: 438 PSLVP-IHGFLPRNIACGWWHTLLLAE 463
           P++V  + G    +I+CG  HT  L++
Sbjct: 214 PTIVKSLSGKKTVSISCGGEHTATLSK 240



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 69/169 (40%), Gaps = 34/169 (20%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD      P +V    G K   ++ GG HT  LS  G V+ +G GG GQLG         
Sbjct: 206 GDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLG--------- 256

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV-VTDAGALLTF 313
                    ++   +  P LV         +   S V ++ CG  H+ V V     + +F
Sbjct: 257 --------HNSLKDEHHPRLV--------AELWGSKVSQVTCGRHHTLVLVALTNRIYSF 300

Query: 314 GWGLYGQCGHGSTNDQ------LRPSYASSLMDIQVEQIAAGLWHTVCI 356
           G G+ GQ G+G    Q      L P+  +   +  +E+I AG  H+  +
Sbjct: 301 GCGMQGQLGNGEQVKQSVPLPVLLPTDCNC--EFTMEKIIAGEKHSFAL 347


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 2/174 (1%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGG+H+ +VT  G   ++G    G+ GHG  ++   P    +L    +E +A G 
Sbjct: 348 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGE 407

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           +H+  +++ G +Y +G   FG LG G + +  VPK +   ++E      ++CG  H+AV+
Sbjct: 408 YHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNF-LMEGIHVSSIACGPYHTAVV 466

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           T  GQ+ ++G   +G LG GD     IP  V  + G      ACG WHT  + E
Sbjct: 467 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 520



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 128/299 (42%), Gaps = 47/299 (15%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A GG+H ++++  G+ + WG   EG+LG G     V  P LI  L     E  A
Sbjct: 346 LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN-VQHPKLIDALNTTNIELVA 404

Query: 267 SGKDRPLLVR-QGSVNSSGKAGRS-----------------------YVKEIACGGRHSA 302
            G+     V   G + + GK                           +V  IACG  H+A
Sbjct: 405 CGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTA 464

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI------ 356
           VVT AG L TFG G +G  GHG       P    SL  ++  + A G+WHT  +      
Sbjct: 465 VVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 524

Query: 357 ------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
                    G+++ +G     +LG G  + + VP  +   ++E    + V+CG   +  L
Sbjct: 525 SSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCV-AALVEPNFCQ-VACGHSLTVAL 582

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           T  G V + G   YGQLG     D  +P+ V   +H      IACG +H  +L   T++
Sbjct: 583 TTSGHVYTMGSPVYGQLG-NPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEV 640



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 40/260 (15%)

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
           L  G+ ++ +A G  HT +++  GQ++ +G G  G LG G R K V  P  +  L+    
Sbjct: 447 LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVFIPREVDSLK---- 501

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGW 315
                              G   V+  ACG  H+A V +             G L T+G 
Sbjct: 502 -------------------GLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 541

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           G   + GHG    +L P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG 
Sbjct: 542 GDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN 601

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
                + VP  ++  + +S   + ++CGA H AVLT   +V +WG    G+LG GD+ DR
Sbjct: 602 PHADGK-VPTRVDGKLHKS-FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDR 659

Query: 436 NIPSLV-PIHGFLPRNIACG 454
           N P+LV  +     ++IACG
Sbjct: 660 NSPTLVESLKDKQVKSIACG 679



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 4/142 (2%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S + + V+ IA G  H V ++ +G  + +G    G+LG GVD     PKL+
Sbjct: 333 DSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLI 392

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHG 445
           +   L +   ++V+CG  HS  +T  G + +WG   +G LG G+ +   +P  V   + G
Sbjct: 393 DA--LNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEG 450

Query: 446 FLPRNIACGWWHTLLLAETTQI 467
               +IACG +HT ++    Q+
Sbjct: 451 IHVSSIACGPYHTAVVTSAGQL 472



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 72/162 (44%), Gaps = 25/162 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G V+  G    GQLG         
Sbjct: 550 GDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG--------- 600

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            PH        A GK  P  V        GK  +S+V+EIACG  H AV+T    + T+G
Sbjct: 601 NPH--------ADGK-VPTRV-------DGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG 644

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  G+ GHG  +D+  P+   SL D QV+ IA G   T  +
Sbjct: 645 KGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 686


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 124/256 (48%), Gaps = 39/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G++I  V+ G  HT +++  GQ++ +G G  G LG G + + V  P  +  L        
Sbjct: 383 GLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDK-ETVFYPREVESL-------- 433

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD-----------AGALLTFGWGLYG 319
                          +G   +  +ACG  H+A + +           +G L T+G G   
Sbjct: 434 ---------------SGLRTIA-VACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKS 477

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG    +L+P+  S+L+D    ++A G   TV ++  G+VY  G   +GQLG   + 
Sbjct: 478 RLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNP-NA 536

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
              +P L+E  +++    + ++CGA H AVLT   +V +WG    G+LG GD  DR  PS
Sbjct: 537 DGKLPCLVEDKLIKDC-VEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDIEDRKAPS 595

Query: 440 LV-PIHGFLPRNIACG 454
           LV  +     +NIACG
Sbjct: 596 LVDTLKERHVKNIACG 611



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 91/176 (51%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  IACG RH+A+V+  G + T+G    G+ GHG   D   P    SL    V+ +A G 
Sbjct: 279 VHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGE 338

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G   +  G LG G D +  +PK +  P LE  +   VSCG  H+A
Sbjct: 339 FHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQIASVSCGPWHTA 397

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           ++T  GQ+ ++G   +G LG GD      P  V  + G     +ACG WH   + E
Sbjct: 398 LITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVE 453



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 125/282 (44%), Gaps = 48/282 (17%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P  +  N  + +  +A G RH  ++S  G+V+ WG    G+LG G   K V  P LI 
Sbjct: 266 LIPKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGMG-KDVTGPQLIE 324

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY-- 318
            L  AA+  D                       +ACG  H+  VT  G + T+G G +  
Sbjct: 325 SL--AATSVDF----------------------VACGEFHTCAVTMTGEIYTWGDGTHNA 360

Query: 319 GQCGHGSTNDQLRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           G  GHG+      P   S  ++ +Q+  ++ G WHT  I+  G+++ FG   FG LG G 
Sbjct: 361 GLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGD 420

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTE-----------DGQVLSWGWNKYGQ 426
            +    P+ +E+  L   R   V+CG  H+A + E            G++ +WG     +
Sbjct: 421 KETVFYPREVES--LSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSR 478

Query: 427 LGLGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLLLAETT 465
           LG GD   R  P+ V     H F    +ACG  H+L +  TT
Sbjct: 479 LGHGDKESRLKPTCVSALIDHTF--HRVACG--HSLTVGLTT 516



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 6/148 (4%)

Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
           GS +D L P    S + + V  IA G+ H   +S +G V+ +G    G+LG G+ +    
Sbjct: 260 GSRSDVLIPKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTG 319

Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW--GWNKYGQLGLGDSIDRNIPSLV 441
           P+L+E+  L +     V+CG  H+  +T  G++ +W  G +  G LG G  +   IP  +
Sbjct: 320 PQLIES--LAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRI 377

Query: 442 --PIHGFLPRNIACGWWHTLLLAETTQI 467
             P+ G    +++CG WHT L+  T Q+
Sbjct: 378 SGPLEGLQIASVSCGPWHTALITSTGQL 405


>gi|42572533|ref|NP_974362.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9279617|dbj|BAB01075.1| unnamed protein product [Arabidopsis thaliana]
 gi|110740358|dbj|BAF02074.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643596|gb|AEE77117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 532

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 32/260 (12%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYG--GEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV+I + AAG   T+++SD G+V+  G    GE + G G   K V TP L+  L++    
Sbjct: 194 GVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYG-GQGTKPVTTPQLVTSLKNI--- 249

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                +V + A G   +AV++  G + TF WG  G+ GH +   
Sbjct: 250 ---------------------FVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAA 288

Query: 329 QLRPS-YASSLMDIQVEQIAAGLWHTVCISVEGR---VYVFGGNQFGQLGTGVDQAENVP 384
            + P      L ++ V QIAAG  + + ++ +     VY  G    G+LG G    E  P
Sbjct: 289 DVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYP 348

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-I 443
           +++E   + + + +VV+ GA H+AV+ +DG+V +WGW +YG LG G+    ++P +V  +
Sbjct: 349 RVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGL 408

Query: 444 HGFLPRNIACGWWHTLLLAE 463
                 ++A G + T ++++
Sbjct: 409 SHVKAVHVATGDYTTFVVSD 428



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 151/342 (44%), Gaps = 53/342 (15%)

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
           +A AG  H V+VT  GEVYT+G+           + G  G    +   +   + + Q   
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYN----------NSGQLGHGHTEDEARIQPVRSLQG-- 194

Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFF------------TLSPCLVTLNPGVKIT 215
              R  +      +T    ++ +  A G E F              +P LVT    + + 
Sbjct: 195 --VRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVV 252

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           + A G   T +LS  G+V+ + +G +G+LG  +                AA  + RPLL 
Sbjct: 253 QAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTE---------------AADVEPRPLLG 297

Query: 276 RQGSVNSSG-KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY 334
              +V      AG  Y+  +AC         +  ++ + G GL G+ GHGS  D+  P  
Sbjct: 298 PLENVPVVQIAAGYCYLLALACQ-------PNGMSVYSVGCGLGGKLGHGSRTDEKYPRV 350

Query: 335 ASS--LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
                ++++Q   +AAG WH   +  +GRV  +G  ++G LG G ++ E+VPK++E   L
Sbjct: 351 IEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEG--L 408

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
              +A  V+ G   + V+++DG V S+G  +   LG   S D
Sbjct: 409 SHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFD 450



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 10/169 (5%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT  G + TFG+   GQ GHG T D+ R     SL  +++ Q AAG   T+ IS +
Sbjct: 154 HSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDD 213

Query: 360 GRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
           G+VY  G   FG+   G    + V  P+L+ +  L++      + G   +AVL+ +G+V 
Sbjct: 214 GKVYACGKESFGEAEYGGQGTKPVTTPQLVTS--LKNIFVVQAAIGNYFTAVLSREGKVY 271

Query: 418 SWGWNKYGQLG----LGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           ++ W   G+LG      D   R  P L P+       IA G+ + L LA
Sbjct: 272 TFSWGNDGRLGHQTEAADVEPR--PLLGPLENVPVVQIAAGYCYLLALA 318


>gi|218186674|gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
          Length = 534

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 136/272 (50%), Gaps = 40/272 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL---GLGSRIKMVPTPHLI 259
           P ++    G++I + AAG   T+++SD G+V+ +G    G++     GSR+  V TP L+
Sbjct: 189 PRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYAAQGSRV--VTTPQLV 246

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             L+                          Y+ + A G   +AV++  G + TF WG   
Sbjct: 247 ESLKDI------------------------YIVQAAIGNFFTAVLSREGHVYTFSWGNDM 282

Query: 320 QCGHGSTNDQLRPSY-ASSLMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGT 375
           + GH +  + ++P   A  L +I V QIAAG  + + ++ +     VY  G    G+LG 
Sbjct: 283 KLGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGH 342

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD---- 431
           G    E  P+L+E     + +  VV+ GA H+AV+ +DG+V +WGW +YG LG G+    
Sbjct: 343 GSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECE 402

Query: 432 SIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           S+ + + SLV +      ++A G + T ++++
Sbjct: 403 SVPKVVESLVNVRAI---HVATGDYTTFVVSD 431



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 146/338 (43%), Gaps = 57/338 (16%)

Query: 108 KAAAGWAHCVSVTEAGEVYTWG---------------WRECVPSAKVTRDFGSAGSFQKD 152
           +A AG  H ++VT  G VYT+G               WR      ++ R        Q  
Sbjct: 150 QAIAGPGHSIAVTTGGAVYTFGSNSSGQLGHGSLEEEWR-----PRIIRSLQGIRIIQAA 204

Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
           +   ++ L ++            V    K S    E E  A G    T +P LV     +
Sbjct: 205 AGAGRTMLVSDAG---------RVYAFGKDSFG--EVEYAAQGSRVVT-TPQLVESLKDI 252

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            I + A G   T +LS  G V+ + +G + +LG  +    V  PHL+     A   ++ P
Sbjct: 253 YIVQAAIGNFFTAVLSREGHVYTFSWGNDMKLGHQTEPNDV-QPHLL-----AGPLENIP 306

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
           ++           AG  Y+  +AC            ++ + G GL G+ GHGS  D+  P
Sbjct: 307 VV--------QIAAGYCYLLALACQ-------PSGMSVYSVGCGLGGKLGHGSRTDEKYP 351

Query: 333 SYASSL--MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
                   ++IQ   +AAG WH   +  +GRV  +G  ++G LG G ++ E+VPK++E+ 
Sbjct: 352 RLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKVVES- 410

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
            L + RA  V+ G   + V+++ G V S+G  +   LG
Sbjct: 411 -LVNVRAIHVATGDYTTFVVSDKGDVYSFGCGESSSLG 447



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 10/169 (5%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT  GA+ TFG    GQ GHGS  ++ RP    SL  I++ Q AAG   T+ +S  
Sbjct: 157 HSIAVTTGGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTMLVSDA 216

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKVV---SCGARHSAVLTEDGQ 415
           GRVY FG + FG+    V+ A    +++ TP ++ES +   +   + G   +AVL+ +G 
Sbjct: 217 GRVYAFGKDSFGE----VEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGH 272

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLA 462
           V ++ W    +LG     +   P L+  P+       IA G+ + L LA
Sbjct: 273 VYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALA 321


>gi|403333599|gb|EJY65911.1| hypothetical protein OXYTRI_13931 [Oxytricha trifallax]
          Length = 1207

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 126/311 (40%), Gaps = 65/311 (20%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP LV L    K  +++ G  HTL L   G+V+ WG    GQ G G+     P   ++  
Sbjct: 143 SPVLVELLVNHKPIQISCGNNHTLALMRDGEVYSWGSNENGQCGSGA----SPFHTVVQW 198

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                     P +V+           R ++K+I  G  HS  V + G L   G G  GQ 
Sbjct: 199 A---------PKIVK------FDDYQRPFIKQIDSGAFHSGFVDEIGRLFMCGKGDQGQL 243

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG--VDQ 379
           G+ S  D+L P Y S + + +++++A G  HTV ++  G +Y  G N  GQLGTG    +
Sbjct: 244 GNMSYQDELSPFYISKIPE-KIQEVACGDDHTVVLTRNGEIYTMGSNSRGQLGTGPSSSR 302

Query: 380 AENVPKLL-ETPILESKRAKVVSCGARHS------------------------------- 407
             NVP LL E   +   R +     A  S                               
Sbjct: 303 GSNVPVLLQELNFIRMTRIRAGQFSASLSVDNQLYLWGCGTFGEFFTPHRVKSVQNLELA 362

Query: 408 ----------AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
                      VLT  G V +WG N  GQLGL DSI R+ P  V  + G     I CG  
Sbjct: 363 DFQLGKSGFLTVLTRQGSVYTWGINDMGQLGLRDSIQRSTPHRVEALDGKRVTQITCGRD 422

Query: 457 HTLLLAETTQI 467
           + + L  T  I
Sbjct: 423 YVIALGLTLPI 433



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 32/220 (14%)

Query: 269 KDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGA--------LLTFGWG--L 317
           K++ L   +G++N   +  RS+  + IA    H A+ T +             F WG   
Sbjct: 16  KNQQLDRSEGAINRQAERDRSHSARRIA---NHDALNTSSNKSQVQGGDYTEVFSWGSDK 72

Query: 318 YGQCGHG---STNDQLR--PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           +GQ G G   S+  Q    P + S   +I + Q++ G  H+V I+    +Y  G N  GQ
Sbjct: 73  FGQLGLGKQISSQKQFHMVPRFCS--YNIPITQVSCGTSHSVFITSSQLIYSMGSNLQGQ 130

Query: 373 LGTG--VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
           LG      Q ++ P L+E  +L + +   +SCG  H+  L  DG+V SWG N+ GQ G G
Sbjct: 131 LGIDDPYTQQKSSPVLVE--LLVNHKPIQISCGNNHTLALMRDGEVYSWGSNENGQCGSG 188

Query: 431 DSIDRNI----PSLVPIHGF---LPRNIACGWWHTLLLAE 463
            S    +    P +V    +     + I  G +H+  + E
Sbjct: 189 ASPFHTVVQWAPKIVKFDDYQRPFIKQIDSGAFHSGFVDE 228


>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 1035

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 140/295 (47%), Gaps = 45/295 (15%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPT 255
           C+  L P  K+   A G  HTL+ +D G V+  G   EGQLGLG         +I     
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTP 176

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
             +I  L  +A       L   G +     NS G+ G                     I+
Sbjct: 177 SDIIKQL--SAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWIS 234

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS--SLMDI--QVEQIAAGLW 351
           CG  HSA VT  G L TFG    G+ G     +QL  ++ S   ++ I  +V Q+A G  
Sbjct: 235 CGYYHSAFVTTDGELYTFGEPENGKLG---LPNQLLINHRSPQRVLGIPDKVIQVACGGG 291

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVL 410
           HTV ++ E  VY FG  QFGQLG G    E + PK+++   ++ ++   +SCG  H+A++
Sbjct: 292 HTVVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIDR--IKDQKISHISCGENHTALM 348

Query: 411 TEDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
           T+ G + ++G  ++G+LGLG  +  ++  P+L      F  + IACG  H L+ A
Sbjct: 349 TDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVFA 403



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 118/244 (48%), Gaps = 25/244 (10%)

Query: 236 WGYGGEGQLGLGSRIK--MVPTPHLIPCLEHAASGKDRP--LLVRQGSVNSSGKA----- 286
           WG GG GQ    +R+   + P    IP    AA G   P  L+   G+V + GK      
Sbjct: 7   WGTGGLGQYLRPNRVAPAVFPKQAQIP---FAAFGMAEPESLVPDTGAVFTFGKTKFAEN 63

Query: 287 --GRSYVKE-----IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
              + + K      ++CG  H+A+VT    L  FG   +GQ G GS +   +P+   +L 
Sbjct: 64  IPSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALK 123

Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKL-LETPILESKRA 397
             +V+  A G  HT+  +  G VY  GGN  GQLG G  D  +   ++   TP   S   
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTP---SDII 180

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWH 457
           K +S GA  SA LTEDG++  WG N  GQ+GL +  +  IP  V + G     I+CG++H
Sbjct: 181 KQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV-GKPISWISCGYYH 239

Query: 458 TLLL 461
           +  +
Sbjct: 240 SAFV 243



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 119/253 (47%), Gaps = 38/253 (15%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
           ++ G  HT I++   +++ +G    GQLGLGS+   +  P  I  L        +P    
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCIKAL--------KP---- 124

Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS 336
                         VK  ACG  H+ V TD G +   G    GQ G G T+D  R ++  
Sbjct: 125 ------------EKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDD--RDTFHQ 170

Query: 337 ----SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
               +  DI ++Q++AG   +  ++ +G+++++G N  GQ+G        +P      + 
Sbjct: 171 IGFFTPSDI-IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPH----EVT 225

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--N 450
             K    +SCG  HSA +T DG++ ++G  + G+LGL + +  N  S   + G   +   
Sbjct: 226 VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ 285

Query: 451 IACGWWHTLLLAE 463
           +ACG  HT++L E
Sbjct: 286 VACGGGHTVVLTE 298


>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           terrestris]
          Length = 539

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 116/248 (46%), Gaps = 39/248 (15%)

Query: 201 LSPCLV--TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PTPH 257
           L+P L+   LN    +  +A GG H+L L++ G+V+ WG+   GQ+G G+ +  V P P 
Sbjct: 121 LTPTLIPSALNNEF-VVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPK 179

Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
           L   L    +GK                     V  I+CG   S  VTD G + ++G   
Sbjct: 180 L---LHIVLNGKK--------------------VVHISCGDSSSVAVTDNGEVYSWGHNG 216

Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
            GQ G G+   Q  P   ++   I +E++  G  HT+ +S EG +YV+G N +GQLG   
Sbjct: 217 VGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNT 276

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARH--SAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
           D    +P  L+ P  E  R   ++    H  S  ++E  ++  WG        LG SI  
Sbjct: 277 DSNVWIPTKLQVP--EMGRILDIATSHYHHISLAMSEGNRIFMWGQ------CLGQSIK- 327

Query: 436 NIPSLVPI 443
            +P+L P+
Sbjct: 328 -VPTLTPL 334



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 99/178 (55%), Gaps = 6/178 (3%)

Query: 291 VKEIACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAA 348
           VK  A G G H   +T+ G + ++G+  Y + G+ STN+ L P+   S ++ + V  IA 
Sbjct: 81  VKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVDIAC 140

Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTG--VDQAENVPKLLETPILESKRAKVVSCGARH 406
           G  H++ ++ +G VY +G N  GQ+G G  +   + +PKLL   +L  K+   +SCG   
Sbjct: 141 GGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHI-VLNGKKVVHISCGDSS 199

Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG-FLPRNIACGWWHTLLLAE 463
           S  +T++G+V SWG N  GQLG+G+   +  P  V      +   + CG+ HTL L++
Sbjct: 200 SVAVTDNGEVYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSD 257



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 127/277 (45%), Gaps = 37/277 (13%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +GD   T+ P  +    G  +   A G G H L L++ G+V+ WGY    +LG  S  + 
Sbjct: 61  TGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNRSTNEG 120

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
           + TP LIP                             +V +IACGG HS  +T+ G +  
Sbjct: 121 L-TPTLIP-----------------------SALNNEFVVDIACGGHHSLALTNKGEVYA 156

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDI-----QVEQIAAGLWHTVCISVEGRVYVFGG 367
           +G  + GQ G G+    ++P     L+ I     +V  I+ G   +V ++  G VY +G 
Sbjct: 157 WGHNVSGQVGCGTILSTVQP--IPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWGH 214

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG G   ++  P+ + T        + V CG  H+  L+++G +  WG N YGQL
Sbjct: 215 NGVGQLGIGNCTSQAEPQKVAT--FAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQL 272

Query: 428 GLGDSIDRNIPS--LVPIHGFLPRNIACGWWHTLLLA 462
           GL    +  IP+   VP  G +  +IA   +H + LA
Sbjct: 273 GLNTDSNVWIPTKLQVPEMGRI-LDIATSHYHHISLA 308



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 7/154 (4%)

Query: 317 LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           +Y    + S    L P + S++    V   AA    T+ ++ +  VY  G N +G LGTG
Sbjct: 5   MYYDLKNWSIFSLLEPKFISNVRMAIVYGKAAN--ETLIVTKDDMVYGIGNNTYGCLGTG 62

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
              +   PK +E   L  K  K  + G   H   LTE+G+V SWG+N Y +LG   + + 
Sbjct: 63  DTHSTIYPKKIEA--LCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNRSTNEG 120

Query: 436 NIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
             P+L+P  ++     +IACG  H+L L    ++
Sbjct: 121 LTPTLIPSALNNEFVVDIACGGHHSLALTNKGEV 154



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 102/280 (36%), Gaps = 51/280 (18%)

Query: 8   REENEKMEECKETVVY-----MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
           +  NE +   K+ +VY      +G L GT    S I       LCG  S K    G    
Sbjct: 34  KAANETLIVTKDDMVYGIGNNTYGCL-GTGDTHSTIYPKKIEALCG-KSVKTFAYGKGPH 91

Query: 63  ALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVS 118
            LA +E GK+ +WG  D  + G     S   G TP   P  L  E  VV  A G  H ++
Sbjct: 92  VLALTEEGKVYSWGYNDYCELGNR---STNEGLTPTLIPSALNNEF-VVDIACGGHHSLA 147

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           +T  GEVY WG      S +V               G  + L T Q  P          K
Sbjct: 148 LTNKGEVYAWGHN---VSGQV---------------GCGTILSTVQPIPKLLHIVLNGKK 189

Query: 179 RRKTSSAREESENPASGDEFFT-----------------LSPCLVTLNPGVKITKVAAGG 221
               S     S       E ++                   P  V     + I KV  G 
Sbjct: 190 VVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGY 249

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLIP 260
            HTL LSD G ++ WG    GQLGL +   + +PT   +P
Sbjct: 250 MHTLALSDEGDLYVWGANSYGQLGLNTDSNVWIPTKLQVP 289


>gi|294463585|gb|ADE77321.1| unknown [Picea sitchensis]
          Length = 243

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 120/268 (44%), Gaps = 49/268 (18%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP--------TPHLIPCLEHAASG 268
           +A G  H+L L++ G+V  WG G  G+LG G +  M          TP LI  LE     
Sbjct: 2   IALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIK-- 59

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                                 V +IA G  HS+ + + G + TFG G   Q G G   D
Sbjct: 60  ----------------------VCKIAAGLLHSSCIDENGTVFTFGQGRMYQLGLGHMKD 97

Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
              PS    L  +Q  Q+A G +HT  IS  G +Y +G ++ G LG G       P+ +E
Sbjct: 98  SSVPSIVKDLPFVQ--QVACGGYHTCAISSSGDLYTWGSSENGCLGLGSKSLAPSPERVE 155

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGW------------NKYGQLGLGDSIDRN 436
             +L    ++V SCG +H+AV++  G V +WGW            +  GQLGLG+  D  
Sbjct: 156 GSLLPLHVSEV-SCGWKHTAVIS-GGNVFTWGWGGSNGTFSDDGFSSGGQLGLGNDFDYL 213

Query: 437 IPSLVPI-HGFLPRNIACGWWHTLLLAE 463
            PS V     F    I+CG+ HT  + E
Sbjct: 214 EPSRVQFDRNFQALQISCGFNHTAAIFE 241



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 47/227 (20%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           +P L+    G+K+ K+AAG  H+  + + G V+ +G G   QLGLG  +K    P ++  
Sbjct: 48  TPKLIKYLEGIKVCKIAAGLLHSSCIDENGTVFTFGQGRMYQLGLG-HMKDSSVPSIV-- 104

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
                  KD P                 +V+++ACGG H+  ++ +G L T+G    G  
Sbjct: 105 -------KDLP-----------------FVQQVACGGYHTCAISSSGDLYTWGSSENGCL 140

Query: 322 GHGSTNDQLRPS---YASSLMDIQVEQIAAGLWHTVCISVEGRVY---------VFGGNQ 369
           G GS +  L PS      SL+ + V +++ G  HT  IS  G V+          F  + 
Sbjct: 141 GLGSKS--LAPSPERVEGSLLPLHVSEVSCGWKHTAVIS-GGNVFTWGWGGSNGTFSDDG 197

Query: 370 F---GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           F   GQLG G D     P  ++     + +A  +SCG  H+A + E+
Sbjct: 198 FSSGGQLGLGNDFDYLEPSRVQFD--RNFQALQISCGFNHTAAIFEE 242



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 108/279 (38%), Gaps = 68/279 (24%)

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           A G  H +++TE G+V +WG  E           G  G   + S  K     +E  P   
Sbjct: 3   ALGSEHSLALTEDGKVLSWGLGEN----------GRLGHGYQSSMFKFLEDSSEHTPKLI 52

Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLS-----------------PCLVTLNPGV 212
           K    E +K  K ++    S         FT                   P +V   P V
Sbjct: 53  KYL--EGIKVCKIAAGLLHSSCIDENGTVFTFGQGRMYQLGLGHMKDSSVPSIVKDLPFV 110

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           +  +VA GG HT  +S  G ++ WG    G LGLGS+  + P+P  +        G   P
Sbjct: 111 Q--QVACGGYHTCAISSSGDLYTWGSSENGCLGLGSK-SLAPSPERVE-------GSLLP 160

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY------------GQ 320
           L                +V E++CG +H+AV++  G + T+GWG              GQ
Sbjct: 161 L----------------HVSEVSCGWKHTAVIS-GGNVFTWGWGGSNGTFSDDGFSSGGQ 203

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            G G+  D L PS      + Q  QI+ G  HT  I  E
Sbjct: 204 LGLGNDFDYLEPSRVQFDRNFQALQISCGFNHTAAIFEE 242



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG---------DSIDRNIPSLVP-IHGFLP 448
           +++ G+ HS  LTEDG+VLSWG  + G+LG G         +    + P L+  + G   
Sbjct: 1   MIALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKV 60

Query: 449 RNIACGWWHTLLLAETTQI 467
             IA G  H+  + E   +
Sbjct: 61  CKIAAGLLHSSCIDENGTV 79



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 47/104 (45%), Gaps = 21/104 (20%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP---LPTEASVVKAAAGWAHCVSVTE 121
           A S SG L TWGS+++ G   L S     +PE      LP   S V  + GW H  +V  
Sbjct: 122 AISSSGDLYTWGSSEN-GCLGLGSKSLAPSPERVEGSLLPLHVSEV--SCGWKH-TAVIS 177

Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKD--STGKQSALPTE 163
            G V+TWGW             GS G+F  D  S+G Q  L  +
Sbjct: 178 GGNVFTWGWG------------GSNGTFSDDGFSSGGQLGLGND 209


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 111/221 (50%), Gaps = 32/221 (14%)

Query: 223  HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
            H + L++ G+V+ WG G  G+LG G+                     DR    RQ     
Sbjct: 846  HAIALTENGEVFSWGDGDYGKLGHGN--------------------SDRQRRPRQ----I 881

Query: 283  SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
                G+  V ++ACG +HSAVVT  G L TFG+G YG+ GHGST ++  P    +L +  
Sbjct: 882  EALRGQEVV-QVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYI 940

Query: 343  VEQIAAGLWHTVCISVEG-RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            + Q+A GL HTV +S +   V+  G   +G+LG G   A+  P  +E  +L     K +S
Sbjct: 941  IGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIE--VLSRVGIKKIS 998

Query: 402  CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP 442
            CGA+ +A LT DG++  +G ++      G+   R  PS  P
Sbjct: 999  CGAQFTAALTWDGKLFMFGQDRM----CGNCETRTSPSFNP 1035



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 103/176 (58%), Gaps = 6/176 (3%)

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL- 350
           +++ CG   + ++ + G +L+ G G YG+ G G+++D  R ++ S+L    V+Q+A    
Sbjct: 783 RKVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTG 842

Query: 351 --WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
              H + ++  G V+ +G   +G+LG G    +  P+ +E   L  +    V+CG +HSA
Sbjct: 843 SDGHAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LRGQEVVQVACGFKHSA 900

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAE 463
           V+T DG++ ++G+  YG+LG G + ++ IP  ++ +  ++   +ACG  HT+++++
Sbjct: 901 VVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYIIGQVACGLNHTVIVSQ 956



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 120/241 (49%), Gaps = 26/241 (10%)

Query: 216  KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
            KV  G   T I+++ G V   G G  G+LG G+        H+      A  G     +V
Sbjct: 784  KVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHI-----SALQG----FIV 834

Query: 276  RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
            +Q +  S+G  G            H+  +T+ G + ++G G YG+ GHG+++ Q RP   
Sbjct: 835  KQLA-TSTGSDG------------HAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQI 881

Query: 336  SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
             +L   +V Q+A G  H+  ++++G+++ FG   +G+LG G    + +P+      LE+ 
Sbjct: 882  EALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPE--RVMALENY 939

Query: 396  RAKVVSCGARHSAVLTEDG-QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL-PRNIAC 453
                V+CG  H+ ++++D   V + G   YG+LG+G +  +  P+ + +   +  + I+C
Sbjct: 940  IIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISC 999

Query: 454  G 454
            G
Sbjct: 1000 G 1000



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 123/334 (36%), Gaps = 93/334 (27%)

Query: 58   GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGW 113
            G  G A+A +E+G++ +WG  D     Y   G      +  P   EA     VV+ A G+
Sbjct: 842  GSDGHAIALTENGEVFSWGDGD-----YGKLGHGNSDRQRRPRQIEALRGQEVVQVACGF 896

Query: 114  AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
             H   VT  G+++T+G+           D+G  G                    ++K+  
Sbjct: 897  KHSAVVTIDGKLFTFGYG----------DYGRLG----------------HGSTTNKKIP 930

Query: 174  EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-DMGQ 232
            E V+            EN   G                    +VA G  HT+I+S D   
Sbjct: 931  ERVMAL----------ENYIIG--------------------QVACGLNHTVIVSQDNLT 960

Query: 233  VWGWGYGGEGQLGLG-SRIKMVPTP---------HLIPC---LEHAASGKDRPLLVRQGS 279
            VW  G G  G+LG+G +  K  PT            I C      A +   +  +  Q  
Sbjct: 961  VWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDR 1020

Query: 280  V--NSSGKAGRSY------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
            +  N   +   S+            + +I+ G  H+  +T  G + T+G    GQ G G 
Sbjct: 1021 MCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGH 1080

Query: 326  TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
            TN    P+   SL    + QI+AG  H+   S E
Sbjct: 1081 TNHVQEPTLVESLSGKNIRQISAGRTHSAAWSCE 1114



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 12/95 (12%)

Query: 362 VYVFGGNQFGQL---GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           VY+FG  + GQL   G+GV     VP+L ++       A+ V CG   + ++  +G VLS
Sbjct: 752 VYLFGAGRHGQLAEVGSGV----LVPQLTKS----FHEARKVVCGQNCTFIINNNGVVLS 803

Query: 419 WGWNKYGQLGLGDSIDRN-IPSLVPIHGFLPRNIA 452
            G   YG+LG G+S D N +  +  + GF+ + +A
Sbjct: 804 CGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLA 838


>gi|297814848|ref|XP_002875307.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321145|gb|EFH51566.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 533

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 137/283 (48%), Gaps = 34/283 (12%)

Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-----SRIKMVPTPHLIPCLEHAASGK 269
           ++  AG  H++ ++  G+V+ +GY   GQLG G     +RI+ V +   I  ++ AA   
Sbjct: 147 SQAVAGPGHSIAVTSKGEVYTFGYNNSGQLGHGHTEEQARIQPVRSLQGIRIIQAAAGAA 206

Query: 270 DRPLLVRQGSVNSSGKAG------------------------RSYVKEIACGGRHSAVVT 305
              L+   G V + GK                            +V + A G   +AV++
Sbjct: 207 RTMLISDDGKVYACGKESFGEAEYGGQGTQPVTTPQLVTSLKNIFVVQAAIGNYFTAVLS 266

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPS-YASSLMDIQVEQIAAGLWHTVCISVEGR--- 361
             G + TF WG  G+ GH +    + P      L ++ V QIAAG  + + ++ +     
Sbjct: 267 REGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMS 326

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           VY  G    G+LG G    E  P+++E   + + + +VV+ GA H+AV+ +DG+V +WGW
Sbjct: 327 VYSVGCGLGGKLGHGSRTDEKYPRVIEQFKILNLQPRVVAAGAWHAAVVGQDGRVCTWGW 386

Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
            +YG LG G+    ++P +V  ++     ++A G + T ++++
Sbjct: 387 GRYGCLGHGNEECESVPKVVEGLNHVKAVHVATGDYTTFVVSD 429



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 154/346 (44%), Gaps = 61/346 (17%)

Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
           +A AG  H ++VT  GEVYT+G+              ++G      T +Q+ +      P
Sbjct: 148 QAVAGPGHSIAVTSKGEVYTFGYN-------------NSGQLGHGHTEEQARIQ-----P 189

Query: 168 SDKRAGEEVVKRR----KTSSAREESENPASGDEFF------------TLSPCLVTLNPG 211
                G  +++      +T    ++ +  A G E F              +P LVT    
Sbjct: 190 VRSLQGIRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTQPVTTPQLVTSLKN 249

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + + + A G   T +LS  G+V+ + +G +G+LG  +                AA  + R
Sbjct: 250 IFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTE---------------AADVEPR 294

Query: 272 PLLVRQGSVNSSG-KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
           PLL    +V      AG  Y+  +AC         +  ++ + G GL G+ GHGS  D+ 
Sbjct: 295 PLLGPLENVPVVQIAAGYCYLLALACQ-------PNGMSVYSVGCGLGGKLGHGSRTDEK 347

Query: 331 RPSYASS--LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            P       ++++Q   +AAG WH   +  +GRV  +G  ++G LG G ++ E+VPK++E
Sbjct: 348 YPRVIEQFKILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVE 407

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
              L   +A  V+ G   + V+++DG V S+G  +   LG   S D
Sbjct: 408 G--LNHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFD 451


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 124/259 (47%), Gaps = 32/259 (12%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           +++  V+ G  H+L +   G+V+ WG G EGQLG+G   ++   P  I  L         
Sbjct: 86  LRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIK----- 140

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQL 330
                              + +++CG  HS  +++ G + ++G   +GQ G G     Q 
Sbjct: 141 -------------------IIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQA 181

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL---GTGVDQAENVPKLL 387
            P    SL  I + Q+AAG  H+  +S+ G  + +G N  GQL   G+ V      P+  
Sbjct: 182 SPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPR-- 239

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGF 446
               L++     +SCG  H+AVLT++G+V ++G N  GQLG   + ++  P L+  I G 
Sbjct: 240 SVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGL 299

Query: 447 LPRNIACGWWHTLLLAETT 465
           + + I CG +HTL    TT
Sbjct: 300 VSQ-IDCGSYHTLAYVYTT 317



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 3/144 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           +++ A G RHS ++   GA+ + G    GQ G      + +P    +L  ++VE ++ G 
Sbjct: 36  LRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGK 95

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAV 409
            H++ +  +GRV+ +G    GQLG G  +  N +P+ ++T  L   +   VSCG  HS  
Sbjct: 96  EHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKT--LTGIKIIQVSCGNYHSLA 153

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSI 433
           L+EDGQV SWG N +GQLGLG  +
Sbjct: 154 LSEDGQVFSWGSNSHGQLGLGKEL 177



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 35/227 (15%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
            L P  +    G+KI +V+ G  H+L LS+ GQV+ WG    GQLGLG  +    +P  +
Sbjct: 127 NLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRV 186

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY- 318
             L+        PL                   ++A GG HS  ++ +G   +FGWG   
Sbjct: 187 RSLDGI------PL------------------AQVAAGGAHSFALSLSGT--SFGWGSNN 220

Query: 319 -GQCGHGSTN---DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
            GQ     +N      +P   S+L  + V  I+ G  HT  ++  G+V+ FG N  GQLG
Sbjct: 221 AGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLG 280

Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
                 +  P+L+E   +E   ++ + CG+ H+ A +   GQV+S+G
Sbjct: 281 HSPTAEKTGPQLMEG--IEGLVSQ-IDCGSYHTLAYVYTTGQVVSFG 324



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 4/128 (3%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
           ++ Q A+G  H++ +  +G V+  G N  GQLG    Q E  PK ++   LE+ R ++VS
Sbjct: 35  ELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQA--LETLRVELVS 92

Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLVP-IHGFLPRNIACGWWHTL 459
           CG  HS  +   G+V +WG    GQLG+G+  + N IP  +  + G     ++CG +H+L
Sbjct: 93  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSL 152

Query: 460 LLAETTQI 467
            L+E  Q+
Sbjct: 153 ALSEDGQV 160


>gi|148226064|ref|NP_001089405.1| protein RCC2 homolog [Xenopus laevis]
 gi|71152035|sp|Q52KW8.1|RCC2_XENLA RecName: Full=Protein RCC2 homolog
 gi|62739346|gb|AAH94159.1| MGC115292 protein [Xenopus laevis]
          Length = 513

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 51/267 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  VA+G    H+L+++  G++W WG   +GQLG G  IK +  P LI  L+     
Sbjct: 138 GVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGD-IKRIDVPKLIESLK----- 191

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                             G  +V   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 192 ------------------GEVFV-HAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTD 232

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  L + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 233 AV-PSPAQILYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQR 291

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E + + +   I ++K  ++          ++CG  HS +L    +V SWG+  YG
Sbjct: 292 IEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYG 351

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPRNIA 452
           +LG  +  D  +P LV +  F  R  A
Sbjct: 352 RLGHSEQRDEMVPRLVKLFDFPGRGAA 378



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 120/291 (41%), Gaps = 58/291 (19%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L+    G      A G  HTL L++ G V+ +G    GQLGLG++   VP+P  I   
Sbjct: 184 PKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI--- 240

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                       +  G            + ++ACG   S ++   G L +FG   YGQ G
Sbjct: 241 ------------LYNGQP----------ITKVACGAEFSMIMDCKGNLYSFGCPEYGQLG 278

Query: 323 HGSTNDQL----RPSYASSLM--------------------DIQVEQIAAGLWHTVCISV 358
           H S    +    R  Y   L+                    ++ V  IA G+ H++ +  
Sbjct: 279 HNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDS 338

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           + RV+ +G   +G+LG    + E VP+L++      + A  +  GA  S  ++E G +  
Sbjct: 339 QKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFF 398

Query: 419 WGWNKYGQLGLGDSIDRNI--PSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           WG           S D  +   ++  + G+  R++ACG    ++ A+ + I
Sbjct: 399 WG-------ATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIVAADESTI 442



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 92/418 (22%), Positives = 142/418 (33%), Gaps = 123/418 (29%)

Query: 53  KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           + V  G C   +L  +  GKL +WG  +D+GQ      K  + P+          V AA 
Sbjct: 142 RSVASGSCAAHSLLITVEGKLWSWGR-NDKGQLGHGDIKRIDVPKLIESLKGEVFVHAAC 200

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
           G  H +++TE G VY                FG     Q     K  A+P          
Sbjct: 201 GRNHTLALTENGSVYA---------------FGENKMGQLGLGNKTDAVP---------- 235

Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
                                         SP  +  N G  ITKVA G   ++I+   G
Sbjct: 236 ------------------------------SPAQILYN-GQPITKVACGAEFSMIMDCKG 264

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN-SSGKAGR-- 288
            ++ +G    GQLG  S  K +     I          D  L+ R+ ++     K G+  
Sbjct: 265 NLYSFGCPEYGQLGHNSDGKYIARAQRIEY--------DCELIARRIAIFIEKTKDGQIL 316

Query: 289 ----SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-- 342
                 V++IACG  HS ++     + ++G+G YG+ GH    D++ P     L D    
Sbjct: 317 PVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVK-LFDFPGR 375

Query: 343 -VEQIAAGLWHTVCISVEGRVYVFGGNQ-------------------------------- 369
              QI AG   +  +S  G ++ +G                                   
Sbjct: 376 GAAQIYAGATCSFAVSEMGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIV 435

Query: 370 --------------FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
                         FG+LG G ++A++     E   L+   +  V  G  H+ V+  D
Sbjct: 436 AADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTLVVARD 493


>gi|114598774|ref|XP_001175007.1| PREDICTED: E3 ISG15--protein ligase HERC5-like, partial [Pan
           troglodytes]
          Length = 207

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 95/166 (57%), Gaps = 4/166 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQVEQIAAG 349
           + +I CG  HS  ++  G L  +G  L+GQ G G        P     L  + + QI+AG
Sbjct: 44  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 103

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
             H++ +S+ G +Y +G N+FGQLG G  ++++ P L+E   L++++ + V+CG  HSA+
Sbjct: 104 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEG--LDNQKVEFVACGGSHSAL 161

Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
           LT+DG + ++G  K+GQLG   + +   P LV  +  +    IACG
Sbjct: 162 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVEYRVTQIACG 207



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 80/150 (53%), Gaps = 25/150 (16%)

Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           T +P +V    GV + +++AG  H++ LS  G ++ WG    GQLGLG            
Sbjct: 83  TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 130

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
               H  S KD P L+ +G  N         V+ +ACGG HSA++T  G L TFG G +G
Sbjct: 131 ----HTES-KDYPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 177

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
           Q GH ST ++LRP   + L++ +V QIA G
Sbjct: 178 QLGHNSTQNELRPCLVAELVEYRVTQIACG 207



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 26/191 (13%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           KI ++  G  H+L LS  G+++ WG    GQLG+G +     TP ++   EH A     P
Sbjct: 43  KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIV---EHLAG---VP 96

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
           L                   +I+ G  HS  ++ +G + ++G   +GQ G G T  +  P
Sbjct: 97  L------------------AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYP 138

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
           S    L + +VE +A G  H+  ++ +G ++ FG  + GQLG    Q E  P L+    L
Sbjct: 139 SLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAE--L 196

Query: 393 ESKRAKVVSCG 403
              R   ++CG
Sbjct: 197 VEYRVTQIACG 207



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 4/132 (3%)

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPIL 392
           + S L + ++ QI  G +H++ +S  G ++ +G N  GQLG G    +   P+++E   L
Sbjct: 35  FESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH--L 92

Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNI 451
                  +S G  HS  L+  G + SWG N++GQLGLG +  ++ PSL+  +       +
Sbjct: 93  AGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFV 152

Query: 452 ACGWWHTLLLAE 463
           ACG  H+ LL +
Sbjct: 153 ACGGSHSALLTQ 164


>gi|392423407|ref|YP_006464398.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Desulfosporosinus acidiphilus SJ4]
 gi|391357873|gb|AFM43571.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Desulfosporosinus acidiphilus SJ4]
          Length = 1910

 Score =  102 bits (254), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 77/253 (30%), Positives = 119/253 (47%), Gaps = 36/253 (14%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           I  V+AG   ++ L   G V+ WG G EGQLG G+      TP  +P             
Sbjct: 383 IVGVSAGDSTSMALRSDGIVFVWGRGTEGQLGNGT-YSNSSTPVQVP------------- 428

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
                        G S +  I+CGG H   +   GA+  +G+G  G+ G+ + +    P 
Sbjct: 429 -------------GLSNIVSISCGGYHCMALRKDGAVFVWGYGYNGELGNNTYSCSATPL 475

Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
              +L  I    I AG +H + ++ +G  + +G N +GQLG G     ++P      ++ 
Sbjct: 476 QVQNLPKITC--IGAGAYHCLAVAYDGTCWSWGYNNYGQLGDGTTTNRSIP----VQVIG 529

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI-A 452
              AK VS G  HS + + DG    WGWN YGQLG GD+ D  +P+   + G+  ++I A
Sbjct: 530 ITNAKFVSGGMYHSVLQSTDGSFYGWGWNAYGQLGKGDNGDSYVPA--GMVGWSGQSIVA 587

Query: 453 CGWWHTLLLAETT 465
           CG+  T++  + T
Sbjct: 588 CGYSTTIIGNDNT 600



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 93/392 (23%), Positives = 150/392 (38%), Gaps = 47/392 (11%)

Query: 50  DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
           D+ K     G G  LA      + + GS +  GQ  L +     +  P  +   +S+V  
Sbjct: 330 DATKSTIAAGSGHTLAVRSDSTVWSAGS-NTFGQ--LGNNSTANSSTPVQVSGLSSIVGV 386

Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
           +AG +  +++   G V+ WG        + T      G++   ST  Q  +P      S 
Sbjct: 387 SAGDSTSMALRSDGIVFVWG--------RGTEGQLGNGTYSNSSTPVQ--VPGLSNIVSI 436

Query: 170 KRAGEEVVKRRKTSSA--REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
              G   +  RK  +        N   G+  ++ S   + +    KIT + AG  H L +
Sbjct: 437 SCGGYHCMALRKDGAVFVWGYGYNGELGNNTYSCSATPLQVQNLPKITCIGAGAYHCLAV 496

Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
           +  G  W WGY   GQLG G+                  + +  P+ V           G
Sbjct: 497 AYDGTCWSWGYNNYGQLGDGT-----------------TTNRSIPVQV----------IG 529

Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
            +  K ++ G  HS + +  G+   +GW  YGQ G G   D   P   + ++    + I 
Sbjct: 530 ITNAKFVSGGMYHSVLQSTDGSFYGWGWNAYGQLGKGDNGDSYVP---AGMVGWSGQSIV 586

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
           A  + T  I  +  VY  G    GQLG G +        + T ++ + R        R  
Sbjct: 587 ACGYSTTIIGNDNTVYSTGYGGDGQLGNGTNNTSYT--FVSTGLINTLRIASGPYDCRTV 644

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
             +T D     WG N YGQ G  ++++ N P+
Sbjct: 645 LAITADYSAHVWGQNAYGQYGDMNTVNSNTPT 676



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 9/125 (7%)

Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
           +D     IAAG  HT+ +  +  V+  G N FGQLG       N      TP+  S  + 
Sbjct: 329 IDATKSTIAAGSGHTLAVRSDSTVWSAGSNTFGQLGN------NSTANSSTPVQVSGLSS 382

Query: 399 V--VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWW 456
           +  VS G   S  L  DG V  WG    GQLG G   + + P  VP    +  +I+CG +
Sbjct: 383 IVGVSAGDSTSMALRSDGIVFVWGRGTEGQLGNGTYSNSSTPVQVPGLSNIV-SISCGGY 441

Query: 457 HTLLL 461
           H + L
Sbjct: 442 HCMAL 446


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 38/255 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           GV + K+A G  HT I+S  GQ++ +G G  G LG G                   S   
Sbjct: 374 GVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGD-----------------TSSVA 416

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD----------AGALLTFGWGLYGQ 320
           RP  V       S K  R  VK +ACG  H+A + +          +G L T+G    G+
Sbjct: 417 RPKEVE------SLKGLR--VKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGK 468

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GH     +L P+   +L D    Q++     TV +++ G V+  G  + GQLG+     
Sbjct: 469 LGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD 528

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
            ++   +E P L+++  + +S G+ H AVLT +G+V +WG    GQLGLG+ +DR+ P+L
Sbjct: 529 SSICS-VEGP-LKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTL 586

Query: 441 V-PIHGFLPRNIACG 454
           V  +      +IACG
Sbjct: 587 VEALEDKQVDSIACG 601



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 46/255 (18%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L+     + +  V+ G +H  I++  G+V+ WG    G+LG    + ++  P +I  L
Sbjct: 259 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLH-PKIIESL 317

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                     ++VK IA G +H+  +  +G L  +G G +    
Sbjct: 318 ------------------------AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSL-- 351

Query: 323 HGSTNDQLRPS--YASSLM----DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            G  +DQ + S  Y   L      + V ++A G WHT  IS  G+++ +G   FG LG G
Sbjct: 352 -GVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG 410

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE----------DGQVLSWGWNKYGQ 426
              +   PK +E+  L+  R K V+CG  H+A + E           G++ +WG    G+
Sbjct: 411 DTSSVARPKEVES--LKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGK 468

Query: 427 LGLGDSIDRNIPSLV 441
           LG  D   + +P+ V
Sbjct: 469 LGHSDKESKLVPTCV 483



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ ++CG +H+A+VT  G + ++G    G+ GH  +   L P    SL    V+ IA G 
Sbjct: 270 VQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGA 329

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---VPKLLETPILESKRAKVVSCGARHS 407
            HT  +++ G ++ +G      LG   DQ +     P  L  P LE      ++CG  H+
Sbjct: 330 KHTCALAISGELFEWGEGTHS-LGVWDDQCQRSQWYPHKLFGP-LEGVSVVKMACGQWHT 387

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           A+++  GQ+ ++G   +G LG GD+     P  V  + G   + +ACG WHT  + E
Sbjct: 388 AIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVE 444



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 8/141 (5%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P   +S   + V+ ++ G  H   ++ +G V+ +G    G+LG  V      PK++E+  
Sbjct: 259 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIES-- 316

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRN--IPSLV--PIHGF 446
           L     K ++ GA+H+  L   G++  WG   +  LG+  D   R+   P  +  P+ G 
Sbjct: 317 LAFTHVKAIAFGAKHTCALAISGELFEWGEGTHS-LGVWDDQCQRSQWYPHKLFGPLEGV 375

Query: 447 LPRNIACGWWHTLLLAETTQI 467
               +ACG WHT +++ + Q+
Sbjct: 376 SVVKMACGQWHTAIISSSGQL 396



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 81/207 (39%), Gaps = 41/207 (19%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM----------GQVWGWGYGGEGQL 244
           GD      P  V    G+++  VA G  HT  + ++          G+++ WG    G+L
Sbjct: 410 GDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKL 469

Query: 245 GLGSR-IKMVPT----------------------------PHLIPCLEHAASGKDRPLLV 275
           G   +  K+VPT                               I   EH   G  R  L 
Sbjct: 470 GHSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHR--LD 527

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                +  G     +V+EI+ G  H AV+T  G + T+G G  GQ G G+  D+  P+  
Sbjct: 528 DSSICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLV 587

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +L D QV+ IA G   TV + +   +
Sbjct: 588 EALEDKQVDSIACGSNFTVAVCLHRSI 614


>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
           and BTB (POZ) domain containing protein 1 [Ciona
           intestinalis]
          Length = 554

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 115/246 (46%), Gaps = 29/246 (11%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
           GD   +L P L+    G KI  ++AG G H L+L+  G V+ WG+    QLG G      
Sbjct: 81  GDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVYSWGHNSYMQLGNGG----- 135

Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
                       + G    LL R    N S K     V +IACG  HS  +T  G + T+
Sbjct: 136 -----------TSPGTSPSLLSR----NISNK-----VVQIACGSHHSMALTTEGEVYTW 175

Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLM-DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
           G+   GQ G GST +Q  P   ++ + + ++  I  G   ++C++  G VY +G N  GQ
Sbjct: 176 GYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQ 235

Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
           LG G +  +  P       L+      V CG  H+  LT++G V  WG N YGQLG G+ 
Sbjct: 236 LGVGNNVNQTNP--CRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQLGSGNK 293

Query: 433 IDRNIP 438
            +   P
Sbjct: 294 ANTCTP 299



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 2/180 (1%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
           +G+  +   A  G H  V+T  G + ++G   Y Q G+G T+    PS  S  +  +V Q
Sbjct: 96  SGQKIISLSAGSGPHVLVLTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQ 155

Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
           IA G  H++ ++ EG VY +G N  GQ+G+G    +  P+ + T  + +KR   ++CG  
Sbjct: 156 IACGSHHSMALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKV-TACIGNKRIIDITCGQT 214

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
            S  +T+ G+V SWG+N  GQLG+G+++++  P  V  + G +   + CG+ H L L + 
Sbjct: 215 TSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDN 274



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 33/223 (14%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP L++ N   K+ ++A G  H++ L+  G+V+ WGY   GQ+G GS         +  C
Sbjct: 141 SPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTAC 200

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
           +                        G   + +I CG   S  VTD+G + ++G+   GQ 
Sbjct: 201 I------------------------GNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQL 236

Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
           G G+  +Q  P   ++L  + + Q+  G  H + ++  G V+ +G N +GQLG+G     
Sbjct: 237 GVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQLGSGNKANT 296

Query: 382 NVPKLLETPILESKRAKVVSCGARH----SAVLTEDGQVLSWG 420
             P  + T I      +VV   A H    SA   + G +  WG
Sbjct: 297 CTPLQVATRI-----GRVVCLAATHYSHSSAARNQSGHIYMWG 334



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 81/201 (40%), Gaps = 32/201 (15%)

Query: 63  ALATSESGKLITWGSADDEGQSYLTSGKHGETP--EPFPLPTEAS--VVKAAAGWAHCVS 118
            L  ++ G + +WG       SY+  G  G +P   P  L    S  VV+ A G  H ++
Sbjct: 111 VLVLTQDGGVYSWGH-----NSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMA 165

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           +T  GEVYTWG+  C             G     ST  Q +     A   +KR  +    
Sbjct: 166 LTTEGEVYTWGYNNC-------------GQIGSGSTANQGSPRKVTACIGNKRIIDITCG 212

Query: 179 RRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
           +  +    +  E              G+     +PC V    GV I +V  G  H L L+
Sbjct: 213 QTTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALT 272

Query: 229 DMGQVWGWGYGGEGQLGLGSR 249
           D G V+GWG    GQLG G++
Sbjct: 273 DNGVVFGWGANSYGQLGSGNK 293



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 16/117 (13%)

Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLT 411
            +  +++ +VY  G N  G LG G + +   P+LLE+     ++   +S G+  H  VLT
Sbjct: 58  VIFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLES--FSGQKIISLSAGSGPHVLVLT 115

Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-------IACGWWHTLLL 461
           +DG V SWG N Y QLG G +     PSL      L RN       IACG  H++ L
Sbjct: 116 QDGGVYSWGHNSYMQLGNGGTSPGTSPSL------LSRNISNKVVQIACGSHHSMAL 166


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 42/257 (16%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++  VA G  H+ + +  G+++ +G G  G LG G R + VP P  +  L        
Sbjct: 370 GLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDR-ESVPYPREVQIL-------- 420

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA----------LLTFGWGLYGQ 320
                          +G   +K +ACG  H+A + +  +          L T+G G   +
Sbjct: 421 ---------------SGLKTIK-VACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHR 464

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHGS    L P+  S+L+D    Q+A G   TV ++  G V+  GG  +GQLG  +   
Sbjct: 465 LGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSDG 524

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
             +P L++  ++  +  + +SCGA H AVLT   +V +WG    G+LG GD+ DR  P+ 
Sbjct: 525 R-LPCLVQDKLV-GEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTF 582

Query: 441 VPIHGFLPRN---IACG 454
           V       RN   I+CG
Sbjct: 583 V--EALKDRNVKSISCG 597



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 91/174 (52%), Gaps = 4/174 (2%)

Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
           EIACG RH A+VT  G + T+G    G+ GHG  ND  RP     L    V+ +A G +H
Sbjct: 268 EIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYH 327

Query: 353 TVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           T  +S  G ++ +G   +  G LG G + +  +PK +  P LE  +   V+CG  HSA+ 
Sbjct: 328 TCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGP-LEGLQVLSVACGTWHSALA 386

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAE 463
           T +G++ ++G   +G LG GD      P  V I  G     +ACG WHT  + E
Sbjct: 387 TSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIE 440



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 43/264 (16%)

Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
           ++A G RH  +++  G+V+ WG    G+LG G              +++  S   RP LV
Sbjct: 268 EIACGVRHVALVTRQGEVFTWGEESGGRLGHG--------------IDNDFS---RPHLV 310

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRPS 333
              +VN+        V  +ACG  H+  V+ +G L T+G G +  G  GHG+      P 
Sbjct: 311 EFLAVNN--------VDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPK 362

Query: 334 YASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
             S  ++ +QV  +A G WH+   +  G+++ FG   FG LG G    E+VP   E  IL
Sbjct: 363 RVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHG--DRESVPYPREVQIL 420

Query: 393 ESKRAKVVSCGARHSAVLTE----------DGQVLSWGWNKYGQLGLGDSIDRNIPSLV- 441
              +   V+CG  H+A + E            ++ +WG     +LG G      +P+ V 
Sbjct: 421 SGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVS 480

Query: 442 PIHGFLPRNIACGWWHTLLLAETT 465
            +  +    +ACG  HT+ +A TT
Sbjct: 481 ALIDYNFHQLACG--HTMTVALTT 502



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 136/369 (36%), Gaps = 62/369 (16%)

Query: 54  DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-----TPEPFPLPTEA-SVV 107
           D    G     A S SG L TWG    +G        HG       P+    P E   V+
Sbjct: 319 DFVACGEYHTCAVSTSGDLFTWG----DGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVL 374

Query: 108 KAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGKQ 157
             A G  H    T  G+++T+G           RE VP  +  +      + +       
Sbjct: 375 SVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWH 434

Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
           +A   E       ++G  +  R+  +    +      G +   L P  V+        ++
Sbjct: 435 TAAIIEVM----SQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQL 490

Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
           A G   T+ L+  G V+  G    GQLG                  +  S    P LV+ 
Sbjct: 491 ACGHTMTVALTTSGHVFTMGGTAYGQLG------------------NPLSDGRLPCLVQD 532

Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
             V         +V+EI+CG  H AV+T    + T+G G  G+ GHG T D+  P++  +
Sbjct: 533 KLVGE-------FVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEA 585

Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
           L D  V+ I+ G   T  I +    +V G +Q   + +G  QA    +         KR 
Sbjct: 586 LKDRNVKSISCGSNFTASICIHK--WVSGADQ--SVCSGCRQAFGFTR---------KRH 632

Query: 398 KVVSCGARH 406
              +CG  H
Sbjct: 633 NCYNCGLVH 641


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 167/430 (38%), Gaps = 53/430 (12%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAG 123
           A + SG ++ WG     G   L  G   +   P  +    S V A AAG+AH  ++  +G
Sbjct: 81  ALTSSGGVMCWG---RNGFGQLGDGTTTDRSTPVAVSGLTSGVTAIAAGYAHTCALMSSG 137

Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
            V  WG          +   G   +  + +    S L +     +   AG++    R +S
Sbjct: 138 GVMCWG-------DNWSGQLGDGTTTDRSTPVAVSGLASGVTAIA---AGDDHTCARTSS 187

Query: 184 SA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
                     S     G      +P  V+   G  +T +AAGG HT  L   G VW WG 
Sbjct: 188 GGVMCWGDNWSGQLGDGTTTDRSTPVAVS-GLGSGVTAIAAGGSHTCALMSSGGVWCWGD 246

Query: 239 GGEGQL---------------GLGSRIKMVPTPHLIPCLEHAASG------------KDR 271
              GQL               GL S +  +       C   ++ G             D 
Sbjct: 247 NWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGGFHTCARTSSGGVMCWGANWSGQLGDG 306

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
               R   V  SG A  S V  IA G  H+  +T +G +  +G+  +GQ G G+T D+  
Sbjct: 307 TTTARSTPVAVSGLA--SGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRST 364

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P   S L    V  IAAG +HT  +   G V  +G N+ GQLG G     + P  +   +
Sbjct: 365 PVAVSGLGS-GVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLV 423

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
                   ++ G  H+   T  G V+ WG N  GQLG G + DR+ P  V   G     I
Sbjct: 424 ---SGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGVTAI 480

Query: 452 ACGWWHTLLL 461
           A G  HT  L
Sbjct: 481 AAGGSHTCAL 490



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 110/251 (43%), Gaps = 36/251 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G  +T +AAGG HT  L   G VW WG    GQLG G+      TP  +  L        
Sbjct: 474 GSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDR-GTPVAVSGLP------- 525

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
                             S V  IA GG H+  +T +G ++ +G    GQ G G+T  + 
Sbjct: 526 ------------------SEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARS 567

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P   S L    V  IAAG  HT  ++  G V+ +G N  GQLG G   A + P  +   
Sbjct: 568 TPVAVSGLPS-GVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSG- 625

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN 450
            L S     ++ G+ H+  LT  G V  WG N  GQLG G   D + P  V + G LP  
Sbjct: 626 -LPSG-VTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTP--VAVSG-LPSG 680

Query: 451 ---IACGWWHT 458
              IA G +HT
Sbjct: 681 VTAIAAGRFHT 691



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 118/283 (41%), Gaps = 29/283 (10%)

Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLE 263
           + +P   +T +AAGG HT  L+  G V  WG  G GQLG G+   R   V    L   + 
Sbjct: 62  SFSPLQGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTSGVT 121

Query: 264 HAASGKDRPL-LVRQGSV-----NSSGKAG----------------RSYVKEIACGGRHS 301
             A+G      L+  G V     N SG+ G                 S V  IA G  H+
Sbjct: 122 AIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGDDHT 181

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
              T +G ++ +G    GQ G G+T D+  P   S L    V  IAAG  HT  +   G 
Sbjct: 182 CARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGS-GVTAIAAGGSHTCALMSSGG 240

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           V+ +G N  GQLG G     + P  +      +     ++ G  H+   T  G V+ WG 
Sbjct: 241 VWCWGDNWSGQLGDGTTTDRSTPVAVSG---LASGVTAIAAGGFHTCARTSSGGVMCWGA 297

Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
           N  GQLG G +  R+ P  V         IA G  HT  L  +
Sbjct: 298 NWSGQLGDGTTTARSTPVAVSGLASGVTAIAAGDSHTCALTSS 340



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 143/374 (38%), Gaps = 44/374 (11%)

Query: 65  ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAG 123
           A + SG ++ WG   D     L  G   +   P  +    S V A AAG +H  ++  +G
Sbjct: 438 ARTSSGGVMCWG---DNWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSG 494

Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
            V+ WG          +   G   +  + +    S LP+E    +        +      
Sbjct: 495 GVWCWG-------RNSSGQLGDGTTTDRGTPVAVSGLPSEVTAIASGGVHTCALTSSGGV 547

Query: 184 SAREESENPASGDEFFTL--SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
                + +   GD   T   +P  V+  P   +  +AAG  HT  L+  G VW WG    
Sbjct: 548 MCWGANWSGQLGDGTTTARSTPVAVSGLP-SGVMAIAAGDLHTCALTSSGGVWCWGANSS 606

Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
           GQLG G+      TP  +  L                          S V  IA G  H+
Sbjct: 607 GQLGDGTTTAR-STPVAVSGLP-------------------------SGVTAIAAGSFHT 640

Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
             +T +G +  +G    GQ G GS  D   P   S L    V  IAAG +HT   +  G 
Sbjct: 641 CALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGLPS-GVTAIAAGRFHTCARTGSGG 699

Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
           V+ +  N++GQLG G     + P  +   +        ++ G  H+   T  G V+ WG 
Sbjct: 700 VWCWASNRYGQLGDGSYTDSSTPVAVSGLV---SGVTAIAAGVVHTCARTSSGGVMCWGA 756

Query: 422 NKYGQLGLGDSIDR 435
           N  GQLG G  + R
Sbjct: 757 NSSGQLGDGRLLYR 770


>gi|12844231|dbj|BAB26286.1| unnamed protein product [Mus musculus]
 gi|148700107|gb|EDL32054.1| hect domain and RLD 4, isoform CRA_d [Mus musculus]
          Length = 233

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 113/246 (45%), Gaps = 39/246 (15%)

Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
           DE   L P         K+  V  G RHT+ + D G V+  G    GQLG          
Sbjct: 18  DEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
                   H  S K    +V   + N         +  +ACG  H+  + D G +  +G 
Sbjct: 68  --------HEKSRKKPEQVVALDAQN---------IVAVACGEAHTLALNDKGQVYAWGL 110

Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
              GQ G   + + +R P    SL DIQ+ Q+A G +H++ +S    V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
            G+D Q +  P+L+++    P ++      V+ G  HS VLT  G +  WG NK+GQLGL
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 430 GDSIDR 435
            D   R
Sbjct: 225 NDENGR 230



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           +L +G   YGQ G G  +++  L P  +   ++ +V  +  GL HTV +  +G VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
           N  GQLG   +++   P+  +   L+++    V+CG  H+  L + GQV +WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           GL  S     + RNI SL  I       +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158



 Score = 38.5 bits (88), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 4/80 (5%)

Query: 53  KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
           +++    CG A  LA ++ G++  WG  D +GQ  L   +     P      ++  +V+ 
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQV 142

Query: 110 AAGWAHCVSVTEAGEVYTWG 129
           A G+ H +++++A EV+ WG
Sbjct: 143 ACGYYHSLALSKASEVFCWG 162


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 98/176 (55%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V +IACG +H+A+VT  G + T+G    G+ GHG   + ++P    +L    V+ +A G 
Sbjct: 344 VLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQPCLVEALASSTVDFVACGE 403

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G   +  G LG G D +  +PK +  P LE  +   V+CG  H+A
Sbjct: 404 FHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGP-LEGLQVAFVTCGPWHTA 462

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           ++T  GQ+ ++G   +G LG GD  + + P  V  + G    ++ACG WHT  + E
Sbjct: 463 LITSTGQLFTFGDGTFGVLGHGDRENISYPREVESLSGLRTVSVACGVWHTAAIVE 518



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 122/256 (47%), Gaps = 39/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++  V  G  HT +++  GQ++ +G G  G LG G R + +  P  +  L    SG  
Sbjct: 448 GLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR-ENISYPREVESL----SG-- 500

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD-----------AGALLTFGWGLYG 319
               +R  SV              ACG  H+A + +           +G L T+G G   
Sbjct: 501 ----LRTVSV--------------ACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKN 542

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG  + +L P+  S+L+D    +IA G   TV ++  GRV+  G   +GQLG     
Sbjct: 543 RLGHGDKDARLEPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSD 602

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
            + +P L+E   L  +  + ++CGA H  VLT   +V +WG    G+LG GD  DR  P+
Sbjct: 603 GK-LPCLVEDK-LAGECVEEIACGAYHVTVLTSRNEVYTWGKGANGRLGHGDVEDRKTPT 660

Query: 440 LV-PIHGFLPRNIACG 454
           LV  +     + IACG
Sbjct: 661 LVEALKDRHVKYIACG 676



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 122/280 (43%), Gaps = 44/280 (15%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P  +  N  + + ++A G +H  +++  G+++ WG    G+LG G    +V      P
Sbjct: 331 LLPKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQ-----P 385

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY-- 318
           CL  A +                     S V  +ACG  H+  VT AG + T+G G +  
Sbjct: 386 CLVEALAS--------------------STVDFVACGEFHTCAVTMAGEIYTWGDGTHNA 425

Query: 319 GQCGHGSTNDQLRPS-YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           G  GHG+      P   A  L  +QV  +  G WHT  I+  G+++ FG   FG LG G 
Sbjct: 426 GLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHG- 484

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTE-----------DGQVLSWGWNKYGQ 426
              EN+    E   L   R   V+CG  H+A + E            G++ +WG     +
Sbjct: 485 -DRENISYPREVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNR 543

Query: 427 LGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
           LG GD   R  P+ +  +  +    IACG  H+L +  TT
Sbjct: 544 LGHGDKDARLEPTCISALIDYNFHRIACG--HSLTVGLTT 581



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S + + V QIA G+ H   ++ +G ++ +G    G+LG GV +    P L+
Sbjct: 329 DILLPKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQPCLV 388

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSW--GWNKYGQLGLGDSIDRNIPSLV--PI 443
           E   L S     V+CG  H+  +T  G++ +W  G +  G LG G  +   IP  +  P+
Sbjct: 389 EA--LASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPL 446

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G     + CG WHT L+  T Q+
Sbjct: 447 EGLQVAFVTCGPWHTALITSTGQL 470



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 66/162 (40%), Gaps = 25/162 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  ++        ++A G   T+ L+  G+V+  G    GQLG         
Sbjct: 547 GDKDARLEPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLG--------- 597

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                    +  S    P LV         K     V+EIACG  H  V+T    + T+G
Sbjct: 598 ---------NPQSDGKLPCLVED-------KLAGECVEEIACGAYHVTVLTSRNEVYTWG 641

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  G+ GHG   D+  P+   +L D  V+ IA G  ++  I
Sbjct: 642 KGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAI 683


>gi|395529104|ref|XP_003766660.1| PREDICTED: protein RCC2-like [Sarcophilus harrisii]
          Length = 483

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 120/267 (44%), Gaps = 51/267 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  V +G    H+L+++  G++W WG   +GQLG G   K V  P LI  L      
Sbjct: 107 GVQVRTVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPKLIEVLS----- 160

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                              +  +   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 161 -------------------KEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 201

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  + + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 202 AI-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 260

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E VP+ +   I ++K  ++          V+CG  H+ VL    +V SWG+  YG
Sbjct: 261 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYG 320

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPRNIA 452
           +LG  +  D  +P LV +  F  R  A
Sbjct: 321 RLGHAEQKDEMVPRLVKLFDFPGRGAA 347



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 49/259 (18%)

Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
           R E      GD     +P L+ +     I   A G  HTL L++ G V+ +G    GQLG
Sbjct: 136 RNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 195

Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
           LG++   +P+P                       +  +G+     + ++ACG   S ++ 
Sbjct: 196 LGNQTDAIPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 230

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
             G L +FG   YGQ GH S    +    R  Y   L+                    ++
Sbjct: 231 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 290

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
            V  +A G  HT+ +  + RV+ +G   +G+LG    + E VP+L++      + A  + 
Sbjct: 291 VVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQIY 350

Query: 402 CGARHSAVLTEDGQVLSWG 420
            G   S  ++E G +  WG
Sbjct: 351 AGYTCSFAVSEVGGLFFWG 369



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 91/420 (21%), Positives = 168/420 (40%), Gaps = 78/420 (18%)

Query: 53  KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           + V  G C   +L  +  GKL +WG  +++GQ      K  E P+   + ++  +V AA 
Sbjct: 111 RTVVSGPCAAHSLLITTEGKLWSWGR-NEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAAC 169

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS-ALPTEQAPPSDK 170
           G  H +++TE G V+ +G              G  G       G Q+ A+P+   P    
Sbjct: 170 GRNHTLALTETGSVFAFG----------ENKMGQLG------LGNQTDAIPS---PAQIM 210

Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
             G+ + K              A G EF                         ++I+   
Sbjct: 211 YNGQPITKM-------------ACGAEF-------------------------SMIMDCK 232

Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
           G ++ +G    GQLG  S  K +     I   +     +   + + +             
Sbjct: 233 GNLYSFGCPEYGQLGHNSDGKFIARAQRIE-YDCELVPRRVAIFIEKTKDGQILPVPNVV 291

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIA 347
           V+++ACG  H+ V+     + ++G+G YG+ GH    D++ P     L D       QI 
Sbjct: 292 VRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGAAQIY 350

Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
           AG   +  +S  G ++ +G     +      ++   PK ++   L   + + ++CG + S
Sbjct: 351 AGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQD--LCGWKIRSLACG-KSS 401

Query: 408 AVLTEDGQVLSWGWN-KYGQLGLGDSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLAE 463
            ++  D   +SWG +  +G+LG GD   ++  +   +  + G     +A G+ H+L++A 
Sbjct: 402 IIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVIAR 461



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI----ACGWWHTL 459
           A HS ++T +G++ SWG N+ GQLG GD+     P L+ +   L + +    ACG  HTL
Sbjct: 119 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEV---LSKEVIVSAACGRNHTL 175

Query: 460 LLAETTQI 467
            L ET  +
Sbjct: 176 ALTETGSV 183


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 168/400 (42%), Gaps = 65/400 (16%)

Query: 39  LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPE 96
           +SP+  +   G S + VC GG   A+ T + G++ TWG     G   L  G     E+P 
Sbjct: 260 VSPVVVQGLLGLSVQQVCCGGQHAAVLT-DCGEIFTWGRG---GFGRLGHGNREGLESPR 315

Query: 97  PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
                     V+ A G+A+  +VT +GE+YTWG       A      G      + +  +
Sbjct: 316 RIEALEGIPCVQVACGFAYTAAVTASGELYTWG-------AGENGRLGLGDVADRHTPSR 368

Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG----- 211
              L ++            V+ R  T  A  + E    GD    L P L+    G     
Sbjct: 369 VEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGAL 428

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---------VPTPHLIPCL 262
           V+   V  GG HT+ L+  GQV+ WG+    QLG+G+   +         +P+P L+  L
Sbjct: 429 VRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESL 488

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                   G + VK +A  G HSA +T  G L   G    GQ G
Sbjct: 489 -----------------------VGMNIVKVVAGWG-HSAALTVDGQLYVCGRNYQGQLG 524

Query: 323 HGS-----TNDQLRPSYAS-----SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
            GS      N++  P  A       L  ++++QIA G  H+V ++  G V+ FG  Q GQ
Sbjct: 525 LGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQ 584

Query: 373 LGTGVDQAENVPKLLETPILESKRAKV--VSCGARHSAVL 410
           LG      E+ P+L++   L+S R ++  V+CG   + VL
Sbjct: 585 LGHESTTREDFPRLVQA--LKSTRREIMHVACGNNCTLVL 622



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 11/183 (6%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+++ CGG+H+AV+TD G + T+G G +G+ GHG+      P    +L  I   Q+A G 
Sbjct: 273 VQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEALEGIPCVQVACGF 332

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
            +T  ++  G +Y +G  + G+LG G     + P  +E   L SK  K V  G+ HS VL
Sbjct: 333 AYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEG--LHSK-VKEVYAGSVHSCVL 389

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH----GFLPRNIAC--GWWHTLLLAET 464
           T +G V ++G ++Y   G GD  D   P L+P      G L R I+   G +HT+ L   
Sbjct: 390 TREGTVYAFGKHEY--TGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQ 447

Query: 465 TQI 467
            Q+
Sbjct: 448 GQV 450



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 135/312 (43%), Gaps = 52/312 (16%)

Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           SP  +    G+   +VA G  +T  ++  G+++ WG G  G+LGLG  +    TP  +  
Sbjct: 313 SPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGD-VADRHTPSRVEG 371

Query: 262 L-----EHAASGKDRPLLVRQGSVNSSGK-----------------------AGRSYVKE 293
           L     E  A      +L R+G+V + GK                          + V++
Sbjct: 372 LHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQ 431

Query: 294 IACG--GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR----------PSYASSLMDI 341
           I+ G  G H+  +T  G +  +G     Q G G++    R          P    SL+ +
Sbjct: 432 ISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGM 491

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA--EN------VPKLLETPILE 393
            + ++ AG  H+  ++V+G++YV G N  GQLG G  Q   +N               L+
Sbjct: 492 NIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQ 551

Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI-- 451
             + K ++CG  HS  + E+G+V S+G  + GQLG   +   + P LV       R I  
Sbjct: 552 HLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREIMH 611

Query: 452 -ACGWWHTLLLA 462
            ACG   TL+LA
Sbjct: 612 VACGNNCTLVLA 623


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 2/174 (1%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ IACGG+H+ +VT  G   ++G    G+ GHG  ++   P    +L    +E +A G 
Sbjct: 309 VQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGE 368

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
           +H+  +++ G +Y +G   FG LG G + +  VPK +   ++E      ++CG  H+AV+
Sbjct: 369 YHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNF-LMEGIHVSSIACGPYHTAVV 427

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           T  GQ+ ++G   +G LG GD     IP  V  + G      ACG WHT  + E
Sbjct: 428 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 481



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 128/299 (42%), Gaps = 47/299 (15%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A GG+H ++++  G+ + WG   EG+LG G     V  P LI  L     E  A
Sbjct: 307 LDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN-VQHPKLIDALSTTNIELVA 365

Query: 267 SGKDRPLLVR-QGSVNSSGKAGRS-----------------------YVKEIACGGRHSA 302
            G+     V   G + + GK                           +V  IACG  H+A
Sbjct: 366 CGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTA 425

Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI------ 356
           VVT AG L TFG G +G  GHG       P    SL  ++  + A G+WHT  +      
Sbjct: 426 VVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 485

Query: 357 ------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
                    G+++ +G     +LG G  + + VP  +   ++E    + V+CG   +  L
Sbjct: 486 SSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCV-AALVEPNFCQ-VACGHSLTVAL 543

Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           T  G V + G   YGQLG     D  +P+ V   +H      IACG +H  +L   T++
Sbjct: 544 TTSGHVYTMGSPVYGQLG-NPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 601



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 40/260 (15%)

Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
           L  G+ ++ +A G  HT +++  GQ++ +G G  G LG G R K V  P  +  L+    
Sbjct: 408 LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVFIPREVDSLK---- 462

Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA------------GALLTFGW 315
                              G   V+  ACG  H+A V +             G L T+G 
Sbjct: 463 -------------------GLRTVR-AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 502

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           G   + GHG    +L P+  ++L++    Q+A G   TV ++  G VY  G   +GQLG 
Sbjct: 503 GDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN 562

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
                + VP  +E  + +S   + ++CGA H AVLT   +V +WG    G+LG GD+ DR
Sbjct: 563 PHADGK-VPTRVEGKLHKS-FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDR 620

Query: 436 NIPSLV-PIHGFLPRNIACG 454
           N P+LV  +     ++IACG
Sbjct: 621 NSPTLVESLKDKQVKSIACG 640



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 4/142 (2%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S + + V+ IA G  H V ++ +G  + +G    G+LG GVD     PKL+
Sbjct: 294 DSLLPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLI 353

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHG 445
           +   L +   ++V+CG  HS  +T  G + +WG   +G LG G+ +   +P  V   + G
Sbjct: 354 DA--LSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEG 411

Query: 446 FLPRNIACGWWHTLLLAETTQI 467
               +IACG +HT ++    Q+
Sbjct: 412 IHVSSIACGPYHTAVVTSAGQL 433



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 74/164 (45%), Gaps = 27/164 (16%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G V+  G    GQLG         
Sbjct: 511 GDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG--------- 561

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
            PH        A GK  P  V        GK  +S+V+EIACG  H AV+T    + T+G
Sbjct: 562 NPH--------ADGK-VPTRVE-------GKLHKSFVEEIACGAYHVAVLTSRTEVYTWG 605

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT--VCI 356
            G  G+ GHG  +D+  P+   SL D QV+ IA G   T  VC+
Sbjct: 606 KGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCL 649


>gi|115488190|ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|77554669|gb|ABA97465.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554670|gb|ABA97466.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862484|gb|ABA97467.2| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|215694343|dbj|BAG89336.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694576|dbj|BAG89767.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704369|dbj|BAG93803.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222616915|gb|EEE53047.1| hypothetical protein OsJ_35777 [Oryza sativa Japonica Group]
          Length = 534

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 136/272 (50%), Gaps = 40/272 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL---GLGSRIKMVPTPHLI 259
           P ++    G++I + AAG   T+++SD G+V+ +G    G++     GSR+  V TP L+
Sbjct: 189 PRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYAAQGSRV--VTTPQLV 246

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             L+                          Y+ + A G   +AV++  G + TF WG   
Sbjct: 247 ESLKDI------------------------YIVQAAIGNFFTAVLSREGHVYTFSWGNDM 282

Query: 320 QCGHGSTNDQLRPSY-ASSLMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGT 375
           + GH +  + ++P   A  L +I V QIAAG  + + ++ +     VY  G    G+LG 
Sbjct: 283 KLGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGH 342

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD---- 431
           G    E  P+L+E     + +  VV+ GA H+AV+ +DG+V +WGW +YG LG G+    
Sbjct: 343 GSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECE 402

Query: 432 SIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           S+ + + SLV +      ++A G + T ++++
Sbjct: 403 SVPKVVESLVNVRAV---HVATGDYTTFVVSD 431



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 156/373 (41%), Gaps = 80/373 (21%)

Query: 58  GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
            G G ++A + SG + T+GS +  GQ    S +    P          +++AAAG    +
Sbjct: 153 AGPGHSIAVTTSGAVYTFGS-NSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTM 211

Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
            V++AG VY +G                     KDS G                      
Sbjct: 212 LVSDAGRVYAFG---------------------KDSFG---------------------- 228

Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
                     E E  A G    T +P LV     + I + A G   T +LS  G V+ + 
Sbjct: 229 ----------EVEYAAQGSRVVT-TPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFS 277

Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
           +G + +LG  +    V  PHL+     A   ++ P++           AG  Y+  +AC 
Sbjct: 278 WGNDMKLGHQTEPNDV-QPHLL-----AGPLENIPVV--------QIAAGYCYLLALACQ 323

Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL--MDIQVEQIAAGLWHTVC 355
                      ++ + G GL G+ GHGS  D+  P        ++IQ   +AAG WH   
Sbjct: 324 -------PSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAV 376

Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
           +  +GRV  +G  ++G LG G ++ E+VPK++E+  L + RA  V+ G   + V+++ G 
Sbjct: 377 VGKDGRVCTWGWGRYGCLGHGNEECESVPKVVES--LVNVRAVHVATGDYTTFVVSDKGD 434

Query: 416 VLSWGWNKYGQLG 428
           V S+G  +   LG
Sbjct: 435 VYSFGCGESSSLG 447



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 10/169 (5%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT +GA+ TFG    GQ GHGS  ++ RP    SL  I++ Q AAG   T+ +S  
Sbjct: 157 HSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTMLVSDA 216

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKVV---SCGARHSAVLTEDGQ 415
           GRVY FG + FG+    V+ A    +++ TP ++ES +   +   + G   +AVL+ +G 
Sbjct: 217 GRVYAFGKDSFGE----VEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGH 272

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLA 462
           V ++ W    +LG     +   P L+  P+       IA G+ + L LA
Sbjct: 273 VYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALA 321



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ ++  G VY FG N  GQLG G  + E  P+++ +  L+  R    + GA
Sbjct: 150 QAIAGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRS--LQGIRIIQAAAGA 207

Query: 405 RHSAVLTEDGQVLSWGWNKYGQL 427
             + ++++ G+V ++G + +G++
Sbjct: 208 GRTMLVSDAGRVYAFGKDSFGEV 230


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 38/255 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           GV + K+A G  HT I+S  GQ++ +G G  G LG G                   S   
Sbjct: 309 GVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGD-----------------TSSVA 351

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD----------AGALLTFGWGLYGQ 320
           RP  V       S K  R  VK +ACG  H+A + +          +G L T+G    G+
Sbjct: 352 RPKEVE------SLKGLR--VKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGK 403

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GH     +L P+   +L D    Q++     TV +++ G V+  G  + GQLG+     
Sbjct: 404 LGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD 463

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
            ++   +E P L+++  + +S G+ H AVLT +G+V +WG    GQLGLG+ +DR+ P+L
Sbjct: 464 SSICS-VEGP-LKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTL 521

Query: 441 V-PIHGFLPRNIACG 454
           V  +      +IACG
Sbjct: 522 VEALEDKQVDSIACG 536



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 46/255 (18%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L+     + +  V+ G +H  I++  G+V+ WG    G+LG    + ++  P +I  L
Sbjct: 194 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLH-PKIIESL 252

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                                     ++VK IA G +H+  +  +G L  +G G +    
Sbjct: 253 ------------------------AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSL-- 286

Query: 323 HGSTNDQLRPS--YASSLM----DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
            G  +DQ + S  Y   L      + V ++A G WHT  IS  G+++ +G   FG LG G
Sbjct: 287 -GVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG 345

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE----------DGQVLSWGWNKYGQ 426
              +   PK +E+  L+  R K V+CG  H+A + E           G++ +WG    G+
Sbjct: 346 DTSSVARPKEVES--LKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGK 403

Query: 427 LGLGDSIDRNIPSLV 441
           LG  D   + +P+ V
Sbjct: 404 LGHSDKESKLVPTCV 418



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V+ ++CG +H+A+VT  G + ++G    G+ GH  +   L P    SL    V+ IA G 
Sbjct: 205 VQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGA 264

Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---VPKLLETPILESKRAKVVSCGARHS 407
            HT  +++ G ++ +G      LG   DQ +     P  L  P LE      ++CG  H+
Sbjct: 265 KHTCALAISGELFEWGEGTHS-LGVWDDQCQRSQWYPHKLFGP-LEGVSVVKMACGQWHT 322

Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           A+++  GQ+ ++G   +G LG GD+     P  V  + G   + +ACG WHT  + E
Sbjct: 323 AIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVE 379



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 8/141 (5%)

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P   +S   + V+ ++ G  H   ++ +G V+ +G    G+LG  V      PK++E+  
Sbjct: 194 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIES-- 251

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRN--IPSLV--PIHGF 446
           L     K ++ GA+H+  L   G++  WG   +  LG+  D   R+   P  +  P+ G 
Sbjct: 252 LAFTHVKAIAFGAKHTCALAISGELFEWGEGTHS-LGVWDDQCQRSQWYPHKLFGPLEGV 310

Query: 447 LPRNIACGWWHTLLLAETTQI 467
               +ACG WHT +++ + Q+
Sbjct: 311 SVVKMACGQWHTAIISSSGQL 331



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 81/207 (39%), Gaps = 41/207 (19%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM----------GQVWGWGYGGEGQL 244
           GD      P  V    G+++  VA G  HT  + ++          G+++ WG    G+L
Sbjct: 345 GDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKL 404

Query: 245 GLGSR-IKMVPT----------------------------PHLIPCLEHAASGKDRPLLV 275
           G   +  K+VPT                               I   EH   G  R  L 
Sbjct: 405 GHSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHR--LD 462

Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
                +  G     +V+EI+ G  H AV+T  G + T+G G  GQ G G+  D+  P+  
Sbjct: 463 DSSICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLV 522

Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRV 362
            +L D QV+ IA G   TV + +   +
Sbjct: 523 EALEDKQVDSIACGSNFTVAVCLHRSI 549


>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Nomascus leucogenys]
          Length = 704

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 134/293 (45%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
           C+  L P  K+   A G  H L+ ++ G V+  G   EGQLGLG          I    +
Sbjct: 80  CVKALKPE-KVKLAACGRNHILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
            H I  L  +A       +   G +     NS G+ G   V                 I+
Sbjct: 139 EHKIKQL--SAGSNTSAAVTEDGRLFMWGKNSEGQIGLKNVPNVCVPQQVTIGKPVSWIS 196

Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGST--NDQLRPSYASSLMDIQVEQIAAGLWHT 353
           CG  HSA VT  G L  FG    G+ G  S    +   P   S + + +V Q+A G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPSQLLGNHRTPQLVSEIPE-KVIQVARGGEHT 255

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E   PK++E   +  +    +SCG  H+A++ +
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHTALIRD 312

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
            G + ++G +++G+LGLG  +  +  IP+L      F+ + +ACG  H ++ A
Sbjct: 313 IGLMYTFGNSRHGKLGLGLENFTNHFIPTLCSDFLRFIVKLVACGGCHMVVFA 365



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  HSAVVT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  H 
Sbjct: 40  LSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHI 99

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G VY  GGN  GQLG G  +  N   ++     E K  K +S G+  SA +TED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAAVTED 158

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V I G     I+CG++H+  + 
Sbjct: 159 GRLFMWGKNSEGQIGLKNVPNVCVPQQVTI-GKPVSWISCGYYHSAFVT 206



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 42/281 (14%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  H+ +++   +++ +G    GQLGLGS+   V  P  +  L     + AA G++ 
Sbjct: 40  LSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSK-SAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                     +K+++ G   SA VT+ 
Sbjct: 99  ILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAVTED 158

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  +  +   P   +  +   V  I+ G +H+  ++ +G +YVFG 
Sbjct: 159 GRLFMWGKNSEGQIGLKNVPNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 368 NQFGQLGTGVDQAEN--VPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
            + G+LG       N   P+L+ E P    ++   V+ G  H+ VLTE+  V ++G  ++
Sbjct: 217 PENGKLGLPSQLLGNHRTPQLVSEIP----EKVIQVARGGEHTVVLTENA-VYTFGLGQF 271

Query: 425 GQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           GQLGLG  + + + P ++  I       I+CG  HT L+ +
Sbjct: 272 GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIRD 312


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 35/233 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + ++A+G  H L L++ G+++ WG    GQLG+G+  + VP P LI  L           
Sbjct: 149 VVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSL----------- 197

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLR 331
                       AG   +  IACGG HS  V+ +GA+  FGWG   +GQ G    N +  
Sbjct: 198 ------------AGVP-IAFIACGGNHSFAVSKSGAI--FGWGKNTFGQLGLNDLNSRCY 242

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P+   +L  + V  I+ G   +V ++ EG V+  G   FGQLG G    E VP+     +
Sbjct: 243 PTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPR----KV 298

Query: 392 LESKRAKV--VSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            E   +K+  ++CG RH+ A +   G++  +G    GQLG+G   + + P +V
Sbjct: 299 FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIV 351



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 22/244 (9%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           ++ +V  G  HTL L+  G+++  G    GQ  LG  +  +P                RP
Sbjct: 37  EVVRVECGTSHTLFLTKEGKMYACGNNDHGQ--LGHDLDTLPNK--------------RP 80

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLR 331
            + R   + S        +  I+CG  HS  +T+ G + ++G    GQ GH + N  Q  
Sbjct: 81  RMSRFKRLTS---LENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPT 137

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P    ++    V QIA+G +H + ++  G +Y +G N +GQLG G   +E VP       
Sbjct: 138 PRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGT-TSEKVPMPTLIQS 196

Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRN 450
           L       ++CG  HS  +++ G +  WG N +GQLGL D   R  P+ L  +     R 
Sbjct: 197 LAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRY 256

Query: 451 IACG 454
           I+CG
Sbjct: 257 ISCG 260



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 151/380 (39%), Gaps = 83/380 (21%)

Query: 13  KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVC-GGGCGFALATSESGK 71
           KM  C        G+   T P K P +S    RL   +++   C   G   +LA +  G+
Sbjct: 56  KMYACGNNDHGQLGHDLDTLPNKRPRMSRF-KRLTSLENYIITCISCGTAHSLALTNWGQ 114

Query: 72  LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
           + +WGS       +        TP          VV+ A+G  HC+++T  GE+Y WG  
Sbjct: 115 VFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWG-- 172

Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
                   +  +G  G     +T ++  +PT                             
Sbjct: 173 --------SNSYGQLGI---GTTSEKVPMPT----------------------------- 192

Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
                        L+    GV I  +A GG H+  +S  G ++GWG    GQLGL     
Sbjct: 193 -------------LIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND--- 236

Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
                          + +  P  +R  ++ S G      V+ I+CG   S  +T+ G + 
Sbjct: 237 --------------LNSRCYPTQLR--TLRSLG------VRYISCGDDFSVFLTNEGGVF 274

Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQF 370
           T G G +GQ GHGS ++++ P     LM  ++ QIA G  HT+  +   G++Y FG    
Sbjct: 275 TCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGV 334

Query: 371 GQLGTGVDQAENVPKLLETP 390
           GQLG G+    + P+++  P
Sbjct: 335 GQLGIGMVGNHSTPQIVRGP 354



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 8/133 (6%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN----VPKLLETPILESKRA 397
           +V ++  G  HT+ ++ EG++Y  G N  GQLG  +D   N    + +      LE+   
Sbjct: 37  EVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYII 96

Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACG 454
             +SCG  HS  LT  GQV SWG N  GQLG  D+ +   P+   I     ++   IA G
Sbjct: 97  TCISCGTAHSLALTNWGQVFSWGSNAVGQLG-HDAENGRQPTPRMIKAIGAKHVVQIASG 155

Query: 455 WWHTLLLAETTQI 467
            +H L L    ++
Sbjct: 156 QYHCLALTNNGEL 168


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 35/233 (15%)

Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
           + ++A+G  H L L++ G+++ WG    GQLG+G+  + VP P LI  L           
Sbjct: 144 VVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSL----------- 192

Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLR 331
                       AG   +  IACGG HS  V+ +GA+  FGWG   +GQ G    N +  
Sbjct: 193 ------------AGVP-IAFIACGGNHSFAVSKSGAI--FGWGKNTFGQLGLNDLNSRCY 237

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P+   +L  + V  I+ G   +V ++ EG V+  G   FGQLG G    E VP+     +
Sbjct: 238 PTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPR----KV 293

Query: 392 LESKRAKV--VSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
            E   +K+  ++CG RH+ A +   G++  +G    GQLG+G   + + P +V
Sbjct: 294 FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIV 346



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 141/350 (40%), Gaps = 82/350 (23%)

Query: 43  PARLCGGDSWKDVC-GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
           P RL   +++   C   G   +LA +  G++ +WGS       +        TP      
Sbjct: 80  PQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAI 139

Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
               VV+ A+G  HC+++T  GE+Y WG          +  +G  G     +T ++  +P
Sbjct: 140 GAKHVVQIASGQYHCLALTNNGELYAWG----------SNSYGQLGI---GTTSEKVPMP 186

Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
           T                                          L+    GV I  +A GG
Sbjct: 187 T------------------------------------------LIQSLAGVPIAFIACGG 204

Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
            H+  +S  G ++GWG    GQLGL                    + +  P  +R  ++ 
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLND-----------------LNSRCYPTQLR--TLR 245

Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
           S G      V+ I+CG   S  +T+ G + T G G +GQ GHGS ++++ P     LM  
Sbjct: 246 SLG------VRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGS 299

Query: 342 QVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
           ++ QIA G  HT+  +   G++Y FG    GQLG G+    + P+++  P
Sbjct: 300 KITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVRGP 349



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 6/181 (3%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAG 349
           V  + CG  H+  +T  G +   G   +GQ GH   T    RP   +SL +  +  I+ G
Sbjct: 38  VVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCG 97

Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSA 408
             H++ ++  G+V+ +G N  GQLG   +      P++++   + +K    ++ G  H  
Sbjct: 98  TAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKA--IGAKHVVQIASGQYHCL 155

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLV-PIHGFLPRNIACGWWHTLLLAETTQ 466
            LT +G++ +WG N YGQLG+G + ++  +P+L+  + G     IACG  H+  ++++  
Sbjct: 156 ALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGA 215

Query: 467 I 467
           I
Sbjct: 216 I 216



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 7/130 (5%)

Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVV 400
           +V ++  G  HT+ ++ EG++Y  G N  GQLG  +D   N  P+ L +  LE+     +
Sbjct: 37  EVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTS--LENYIITCI 94

Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWH 457
           SCG  HS  LT  GQV SWG N  GQLG  D+ +   P+   I     ++   IA G +H
Sbjct: 95  SCGTAHSLALTNWGQVFSWGSNAVGQLG-HDAENGRQPTPRMIKAIGAKHVVQIASGQYH 153

Query: 458 TLLLAETTQI 467
            L L    ++
Sbjct: 154 CLALTNNGEL 163


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 125/271 (46%), Gaps = 49/271 (18%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+ ++ VA G  HT +++  GQ++ +G G  G LG G    M      IP    A  G+ 
Sbjct: 398 GMHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMS-----IPREVEALRGQ- 451

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD---------------AGALLTFGW 315
                                  +ACG  H+A V +               +G L T+G 
Sbjct: 452 -------------------RTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGD 492

Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
           G  G+ GHG    +L P   ++L++    Q+A G   +V ++  GRVY  G   +GQLG+
Sbjct: 493 GDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGS 552

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
            V   + +P L+E  I  S   + V+CG+ H AVLT   +V +WG    GQLG GD+  R
Sbjct: 553 PVADGK-IPTLVEGKIANS-FVEEVACGSYHVAVLTSKTEVYTWGKGTNGQLGHGDNDHR 610

Query: 436 NIPSLVPIHGFLP----RNIACGWWHTLLLA 462
           N P+LV    FL     +N+ CG   T  ++
Sbjct: 611 NTPTLVD---FLKDKQVKNVVCGLNFTAAIS 638



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 132/304 (43%), Gaps = 52/304 (17%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAA 266
           + +  +A GG+H ++++  G+V+ WG     +LG G  +  V  P LI  L     E  A
Sbjct: 292 LDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVD-VSHPKLIDALCGMNIELVA 350

Query: 267 SGKDRPLLVR---------QGSVNS-----------------SGKAGRSYVKEIACGGRH 300
            G+     V           G+ NS                 SG     +V  +ACG  H
Sbjct: 351 CGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWH 410

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI---- 356
           +AVVT AG L TFG G +G  GHG  +    P    +L   +  ++A G+WHT  +    
Sbjct: 411 TAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVELM 470

Query: 357 -----------SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
                      S  G+++ +G    G+LG G  +   VP+ +   I ES     V+CG  
Sbjct: 471 IASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINES--FCQVACGHN 528

Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAE 463
            S  LT  G+V + G   YGQLG     D  IP+LV   I       +ACG +H  +L  
Sbjct: 529 LSVALTTSGRVYTMGSAVYGQLG-SPVADGKIPTLVEGKIANSFVEEVACGSYHVAVLTS 587

Query: 464 TTQI 467
            T++
Sbjct: 588 KTEV 591



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 34/201 (16%)

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
           +++ WG G +G+LG G +      P L+P        +    L+ +              
Sbjct: 486 KLFTWGDGDKGRLGHGDK-----EPRLVP--------QSVTALINESFC----------- 521

Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
            ++ACG   S  +T +G + T G  +YGQ G    + ++       + +  VE++A G +
Sbjct: 522 -QVACGHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANSFVEEVACGSY 580

Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
           H   ++ +  VY +G    GQLG G +   N P L++   L+ K+ K V CG   +A ++
Sbjct: 581 HVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVD--FLKDKQVKNVVCGLNFTAAIS 638

Query: 412 -------EDGQVLSWGWNKYG 425
                   D  + S   N++G
Sbjct: 639 LHKWVSCADHSICSGCHNQFG 659



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 25/164 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  VT        +VA G   ++ L+  G+V+  G    GQLG         
Sbjct: 501 GDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLG--------- 551

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           +P         A GK  P LV        GK   S+V+E+ACG  H AV+T    + T+G
Sbjct: 552 SP--------VADGKI-PTLVE-------GKIANSFVEEVACGSYHVAVLTSKTEVYTWG 595

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
            G  GQ GHG  + +  P+    L D QV+ +  GL  T  IS+
Sbjct: 596 KGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISL 639


>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 722

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 33/221 (14%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
            +  V A    T+ +   G+++ WG GG  +LG  + I     P  I  L          
Sbjct: 214 NVESVKACSDFTIAIDKQGRIFSWGKGGFNRLGYKAEIVNQKHPLQIESL---------- 263

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
                          +  + + + G  HSA +T+ G L T+G    GQ GHG     + P
Sbjct: 264 --------------SKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIFP 309

Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV----PKLLE 388
               +L +  +  +A G  HT+ +S    ++ +G N  GQLG     +EN+    PK  +
Sbjct: 310 KEVQALQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRA---SENLKSSDPK--K 364

Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
               E K  K ++CG++HS VL +DG V SWG N+YGQLG 
Sbjct: 365 ISFFEDKSIKQIACGSKHSLVLLQDGTVYSWGSNQYGQLGF 405



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 32/193 (16%)

Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
           +I + + G  H+  +++ G+++ WG    GQLG G + K    P  +  L++        
Sbjct: 267 QIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHG-QAKADIFPKEVQALQN-------- 317

Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLR 331
                           +Y+  +ACG  H+  ++    L ++G    GQ G  S N     
Sbjct: 318 ----------------TYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSSD 361

Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
           P   S   D  ++QIA G  H++ +  +G VY +G NQ+GQL  G DQ  N     +  I
Sbjct: 362 PKKISFFEDKSIKQIACGSKHSLVLLQDGTVYSWGSNQYGQL--GFDQDSNA----QNTI 415

Query: 392 LESKRAKVVSCGA 404
             S+   ++S  +
Sbjct: 416 ASSQNVDLISQNS 428



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 118/283 (41%), Gaps = 43/283 (15%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
           P  VT     KI  ++ G  H+   S ++ QV+ WG G  G+LG     K +  P +   
Sbjct: 82  PVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLG-NKESKDLQYPEIF-- 138

Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT---------DAGALLT 312
                +G  +P  ++              + EI+CG  H+  V              L  
Sbjct: 139 -----NGLKQPEGIQWE------------ISEISCGENHTVAVIKQINVNNSQSQNKLYV 181

Query: 313 FG----WGL---YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
           +G    W L    G+  + +   ++ P Y        VE + A    T+ I  +GR++ +
Sbjct: 182 WGSSSDWQLGIDTGKTDYVNQPLEMSPDYWEG----NVESVKACSDFTIAIDKQGRIFSW 237

Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
           G   F +LG   +   N    L+   L  ++    S G+ HSA +T +G++ +WG +  G
Sbjct: 238 GKGGFNRLGYKAEIV-NQKHPLQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNG 296

Query: 426 QLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
           QLG G +     P  V  +      ++ACG  HTL L++  ++
Sbjct: 297 QLGHGQAKADIFPKEVQALQNTYIVSVACGEGHTLALSKNNEL 339



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 22/144 (15%)

Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG------TGVDQAENVPKLLETPI----L 392
           + +I  G  H+  I     VY +G N   +LG        + QA+ +P+ ++ P+    L
Sbjct: 30  IVKIVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQAD-IPEQIKIPVKVTEL 88

Query: 393 ESKRAKVVSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP--- 448
            +K+   +S G  HS A  TE  QV  WG  +YG+LG  +S D   P +   +G      
Sbjct: 89  SNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQYPEI--FNGLKQPEG 146

Query: 449 -----RNIACGWWHTLLLAETTQI 467
                  I+CG  HT+ + +   +
Sbjct: 147 IQWEISEISCGENHTVAVIKQINV 170


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V  IACG RH+A+VT  G + T+G    G+ GHG   D ++P    SL    V+ IA G 
Sbjct: 282 VHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDFIACGE 341

Query: 351 WHTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G      G LG G D +  +PK +  P LE  +   V+CG  H+A
Sbjct: 342 FHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGP-LEGLQVASVTCGPWHTA 400

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           ++T  GQ+ ++G   +G LG G+  +   P  V  + G     +ACG WHT  + E
Sbjct: 401 LVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGVWHTAAVVE 456



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 119/256 (46%), Gaps = 39/256 (15%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++  V  G  HT +++  GQ++ +G G  G LG G+R + +  P  +  L        
Sbjct: 386 GLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNR-ENIAYPKEVESL-------- 436

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA-----------GALLTFGWGLYG 319
                          AG   +  +ACG  H+A V +            G L T+G G   
Sbjct: 437 ---------------AGLRTIA-VACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKN 480

Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
           + GHG    +L+P+   +L+D    +IA G   TV ++  G V+  G   +GQLG     
Sbjct: 481 RLGHGDKEPRLKPTCVPALIDFNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQLGNPYAD 540

Query: 380 AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
            + VP L+E   L  +  + ++CGA H AVLT   +V +WG    G+LG GD  DR  P+
Sbjct: 541 GK-VPCLVEDK-LSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDGEDRKTPT 598

Query: 440 LV-PIHGFLPRNIACG 454
           LV  +     + IACG
Sbjct: 599 LVEALKDKHVKYIACG 614



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 125/280 (44%), Gaps = 44/280 (15%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P  +  N  + +  +A G RH  +++  G+V+ WG    G+LG G   K V  P L+ 
Sbjct: 269 LLPRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVG-KDVIQPRLVE 327

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY-- 318
            L                          + V  IACG  H+  VT AG + T+G G++  
Sbjct: 328 SL------------------------AMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYA 363

Query: 319 GQCGHGSTNDQLRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           G  GHG+      P   S  ++ +QV  +  G WHT  ++  G+++ FG   FG LG G 
Sbjct: 364 GLLGHGTDISHWIPKRISGPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGN 423

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTE-----------DGQVLSWGWNKYGQ 426
            +    PK +E+  L   R   V+CG  H+A + E            G++ +WG     +
Sbjct: 424 RENIAYPKEVES--LAGLRTIAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNR 481

Query: 427 LGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
           LG GD   R  P+ VP +  F    IACG  H+L +  TT
Sbjct: 482 LGHGDKEPRLKPTCVPALIDFNFHKIACG--HSLTVGLTT 519



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 119/284 (41%), Gaps = 46/284 (16%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE--GQLGLGSRIKMVPTPHL 258
           + P LV       +  +A G  HT  ++  G+++ WG G    G LG G+ I      H 
Sbjct: 321 IQPRLVESLAMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDIS-----HW 375

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
           IP      SG   PL   Q             V  + CG  H+A+VT  G L TFG G +
Sbjct: 376 IP---KRISG---PLEGLQ-------------VASVTCGPWHTALVTSTGQLFTFGDGTF 416

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI-----------SVEGRVYVFGG 367
           G  GHG+  +   P    SL  ++   +A G+WHT  +              G+++ +G 
Sbjct: 417 GVLGHGNRENIAYPKEVESLAGLRTIAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGD 476

Query: 368 NQFGQLGTGVDQAENVPKLLET--PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
               +LG G    +  P+L  T  P L       ++CG   +  LT  G V + G   YG
Sbjct: 477 GDKNRLGHG----DKEPRLKPTCVPALIDFNFHKIACGHSLTVGLTTSGHVFTMGSTVYG 532

Query: 426 QLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           QLG     D  +P LV   + G     IACG +H  +L    ++
Sbjct: 533 QLG-NPYADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEV 575



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S + + V  IA G  H   ++ +G V+ +G    G+LG GV +    P+L+
Sbjct: 267 DVLLPRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLV 326

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSW--GWNKYGQLGLGDSIDRNIPSLV--PI 443
           E+  L       ++CG  H+  +T  G++ +W  G +  G LG G  I   IP  +  P+
Sbjct: 327 ES--LAMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPL 384

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G    ++ CG WHT L+  T Q+
Sbjct: 385 EGLQVASVTCGPWHTALVTSTGQL 408



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 44/214 (20%)

Query: 211 GVKITKVAAGGRHTLILSDM-----------GQVWGWGYGGEGQLGLGS---RIKMVPTP 256
           G++   VA G  HT  + ++           G+++ WG G + +LG G    R+K    P
Sbjct: 438 GLRTIAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 497

Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
            LI    H                            +IACG   +  +T +G + T G  
Sbjct: 498 ALIDFNFH----------------------------KIACGHSLTVGLTTSGHVFTMGST 529

Query: 317 LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
           +YGQ G+   + ++       L    VE+IA G +H   ++    VY +G    G+LG G
Sbjct: 530 VYGQLGNPYADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 589

Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
             +    P L+E   L+ K  K ++CGA +SA +
Sbjct: 590 DGEDRKTPTLVEA--LKDKHVKYIACGANYSAAI 621



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 69/166 (41%), Gaps = 33/166 (19%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         K+A G   T+ L+  G V+  G    GQLG         
Sbjct: 485 GDKEPRLKPTCVPALIDFNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQLG--------- 535

Query: 255 TPHL---IPCL-EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
            P+    +PCL E   SG+                     V+EIACG  H AV+T    +
Sbjct: 536 NPYADGKVPCLVEDKLSGES--------------------VEEIACGAYHVAVLTSRNEV 575

Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            T+G G  G+ GHG   D+  P+   +L D  V+ IA G  ++  I
Sbjct: 576 YTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACGANYSAAI 621


>gi|221063272|gb|ACL98472.1| telophase disc 60 kDa protein [Xenopus laevis]
          Length = 497

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 51/267 (19%)

Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
           GV++  VA+G    H+L+++  G++W WG   +GQLG G  IK +  P LI  L+     
Sbjct: 138 GVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGD-IKRIDVPKLIESLK----- 191

Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
                             G  +V   ACG  H+  +T+ G++  FG    GQ G G+  D
Sbjct: 192 ------------------GEVFV-HAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTD 232

Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
            + PS A  L + Q + ++A G   ++ +  +G +Y FG  ++GQLG   D         
Sbjct: 233 AV-PSPAQILYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQR 291

Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
                E + + +   I ++K  ++          ++CG  HS +L    +V SWG+  YG
Sbjct: 292 IEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYG 351

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPRNIA 452
           +LG  +  D  +P LV +  F  R  A
Sbjct: 352 RLGHSEQRDEMVPRLVKLFDFPGRGAA 378



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 120/291 (41%), Gaps = 58/291 (19%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
           P L+    G      A G  HTL L++ G V+ +G    GQLGLG++   VP+P  I   
Sbjct: 184 PKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI--- 240

Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
                       +  G            + ++ACG   S ++   G L +FG   YGQ G
Sbjct: 241 ------------LYNGQP----------ITKVACGAEFSMIMDCKGNLYSFGCPEYGQLG 278

Query: 323 HGSTNDQL----RPSYASSLM--------------------DIQVEQIAAGLWHTVCISV 358
           H S    +    R  Y   L+                    ++ V  IA G+ H++ +  
Sbjct: 279 HNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDS 338

Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
           + RV+ +G   +G+LG    + E VP+L++      + A  +  GA  S  ++E G +  
Sbjct: 339 QKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFF 398

Query: 419 WGWNKYGQLGLGDSIDRNI--PSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
           WG           S D  +   ++  + G+  R++ACG    ++ A+ + I
Sbjct: 399 WG-------ATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIVAADESTI 442



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 91/418 (21%), Positives = 141/418 (33%), Gaps = 123/418 (29%)

Query: 53  KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
           + V  G C   +L  +  GKL +WG  +D+GQ      K  + P+          V AA 
Sbjct: 142 RSVASGSCAAHSLLITVEGKLWSWGR-NDKGQLGHGDIKRIDVPKLIESLKGEVFVHAAC 200

Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
           G  H +++TE G VY                FG     Q     K  A+P          
Sbjct: 201 GRNHTLALTENGSVYA---------------FGENKMGQLGLGNKTDAVP---------- 235

Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
                                         SP  +  N G  ITKVA G   ++I+   G
Sbjct: 236 ------------------------------SPAQILYN-GQPITKVACGAEFSMIMDCKG 264

Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN-SSGKAGR-- 288
            ++ +G    GQLG  S  K +     I          D  L+ R+ ++     K G+  
Sbjct: 265 NLYSFGCPEYGQLGHNSDGKYIARAQRIEY--------DCELIARRIAIFIEKTKDGQIL 316

Query: 289 ----SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-- 342
                 V++IACG  HS ++     + ++G+G YG+ GH    D++ P     L D    
Sbjct: 317 PVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVK-LFDFPGR 375

Query: 343 -VEQIAAGLWHTVCISVEGRVYVFGGNQ-------------------------------- 369
              QI AG   +  +S  G ++ +G                                   
Sbjct: 376 GAAQIYAGATCSFAVSEMGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIV 435

Query: 370 --------------FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
                         FG+LG G ++A++     E   L+   +     G  H+ V+  D
Sbjct: 436 AADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQAIMGNSHTLVVARD 493


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 4/178 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V++IACG RH  + T  G + T+G  L G+ GHG+  D  RP    SL    VE IA G 
Sbjct: 263 VQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGE 322

Query: 351 WHTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  ++  G +Y +G   +  G LG G   +  +PK +  P LE  +   V+CG+ HSA
Sbjct: 323 FHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGP-LEGLQVLSVACGSWHSA 381

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
           +    G++ ++G   +G LG GD      P  V  + GF    +ACG WH+  + E +
Sbjct: 382 LTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEIS 439



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 122/272 (44%), Gaps = 45/272 (16%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
           + + ++A G RH  + +  G+V+ WG    G+LG G+   +                  R
Sbjct: 261 LDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDIC-----------------R 303

Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQ 329
           P LV   +V        S V+ IACG  H+ VVT +G L  +G G Y  G  GHG+    
Sbjct: 304 PKLVESLAV--------SNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSH 355

Query: 330 LRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
             P   S  ++ +QV  +A G WH+      G+++ FG   FG LG G  ++   PK  E
Sbjct: 356 WLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPK--E 413

Query: 389 TPILESKRAKVVSCGARHSAVLTE-DGQ---------VLSWGWNKYGQLGLGDSIDRNIP 438
              L   RA  V+CG  HSA + E  GQ         + +WG     +LG GD   + +P
Sbjct: 414 VEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP 473

Query: 439 SLVPI---HGFLPRNIACGWWHTLLLAETTQI 467
           + V     H F    +ACG   T+ LA +  +
Sbjct: 474 TCVQALVDHNF--HQVACGHSMTVALATSGHV 503



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 38/255 (14%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++  VA G  H+ +    G+++ +G G  G LG G R + V  P  +  L    + K 
Sbjct: 367 GLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR-ESVAYPKEVEALSGFRAMK- 424

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD----------AGALLTFGWGLYGQ 320
                                  +ACG  HSA + +          +  L T+G G   +
Sbjct: 425 -----------------------VACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNR 461

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
            GHG    +L P+   +L+D    Q+A G   TV ++  G V+  G +  GQLG    +A
Sbjct: 462 LGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQLGN--PKA 519

Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
           +     +    L ++  + +SCG+ H A LT   +V +WG    G+LG G   D+  P+L
Sbjct: 520 DGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTL 579

Query: 441 V-PIHGFLPRNIACG 454
           V  +     ++I+CG
Sbjct: 580 VDALKDRHVKSISCG 594



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 6/140 (4%)

Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
           S  D L P    S + + V+QIA G  H    + +G V+ +G    G+LG G D     P
Sbjct: 245 SKTDFLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP 304

Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGLGDSIDRNIPSLV- 441
           KL+E+  L     + ++CG  H+ V+T  G +  WG   Y  G LG G  +   +P  V 
Sbjct: 305 KLVES--LAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVS 362

Query: 442 -PIHGFLPRNIACGWWHTLL 460
            P+ G    ++ACG WH+ L
Sbjct: 363 GPLEGLQVLSVACGSWHSAL 382



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 76/175 (43%), Gaps = 27/175 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         +VA G   T+ L+  G V+  G    GQLG         
Sbjct: 465 GDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQLG--------- 515

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                      A GK +P +V+        K G   V+EI+CG  H A +T    + T+G
Sbjct: 516 --------NPKADGK-QPCMVQD-------KLGNELVEEISCGSNHVAALTSRSEVYTWG 559

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
            G  G+ GHGS  D+ +P+   +L D  V+ I+ G   T CI +    +V G +Q
Sbjct: 560 MGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCICIHK--WVSGADQ 612


>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
 gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
           adhaerens]
          Length = 330

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 134/306 (43%), Gaps = 47/306 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGS----- 248
           G++    SP +V       I ++A G      L ++ G+V+ WG G  G LG G+     
Sbjct: 15  GEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLGKYGILGQGNLRSRF 74

Query: 249 ---RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY--------------- 290
              +I    + ++I    H         +   GSV S G    S                
Sbjct: 75  APLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLGVGDTEPYAEPQLV 134

Query: 291 -------VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI-- 341
                  + ++ACG  HSA ++  G L  +G G  GQ G G+ N    P+    ++ I  
Sbjct: 135 TVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPT----ILHIGE 190

Query: 342 ---QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
              +V  +A G  HT  ++V G VY FG N +GQ+        ++P         SKR  
Sbjct: 191 KKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMNKFHLP--YRISFNTSKRFV 248

Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGW 455
            VSCG+ HSA +TE+G++ +WG    G+LGLGD   R+ P+   + GF  +    IACG 
Sbjct: 249 SVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPT--EVEGFRDKKIGRIACGS 306

Query: 456 WHTLLL 461
            HT  L
Sbjct: 307 KHTAAL 312



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 11/160 (6%)

Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE-GRVYVFGGN 368
           + T+G G+ G  GHG   D   P    +L+   ++++A GL     ++ E G+VY +G  
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60

Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV---LTEDGQVLSWGWNKYG 425
           ++G LG G  ++   P  L+    +S     +SC   H+A    +T  G V S+G N   
Sbjct: 61  KYGILGQGNLRSRFAP--LKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNS 118

Query: 426 QLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLLLA 462
           QLG+GD+     P LV +      NI   ACG +H+  L+
Sbjct: 119 QLGVGDTEPYAEPQLVTV--LNDENIIKVACGKYHSAALS 156



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 120/315 (38%), Gaps = 61/315 (19%)

Query: 91  HGETPE-PFPLPTEASV---VKAAAGWAHCVSVTEA--GEVYTWGWRE--CVPSAKVTRD 142
           HGE  + P P   EA +   +K  A   H V    A  G+VY+WG  +   +    +   
Sbjct: 14  HGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLGKYGILGQGNLRSR 73

Query: 143 FG--SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS----GD 196
           F      SF+  +    S      A          V     T S     +N  S    GD
Sbjct: 74  FAPLKIASFKSSNVIDISCHELHAAA---------VTSVTNTGSVYSFGDNSNSQLGVGD 124

Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--------- 247
                 P LVT+     I KVA G  H+  LS  G ++ WG G +GQLGLG         
Sbjct: 125 TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPT 184

Query: 248 --------SRIKMVPTPHLIPCL----------------EHAASGKDRPLLVRQGSVNSS 283
                   +++  V    L  C+                + AA   ++  L  + S N+S
Sbjct: 185 ILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMNKFHLPYRISFNTS 244

Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
               + +V  ++CG  HSA +T+ G L  +G    G+ G G    +  P+      D ++
Sbjct: 245 ----KRFV-SVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTEVEGFRDKKI 299

Query: 344 EQIAAGLWHTVCISV 358
            +IA G  HT  + +
Sbjct: 300 GRIACGSKHTAALII 314


>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
           niloticus]
          Length = 531

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 30/223 (13%)

Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
           ++P LV+ N    K+T+VA G  H++ L+D G+V+ WGY   GQ+G GS     PTP  +
Sbjct: 116 VAPVLVSANLLNKKVTEVACGSHHSMALTDTGEVYAWGYNNCGQVGSGSTANQ-PTPRRV 174

Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
             CL++  +                          I CG   S  V D G +  +G+   
Sbjct: 175 SSCLQNKVA------------------------VSIVCGQTSSLAVVDNGEVYGWGYNGN 210

Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
           GQ G G+  +Q+ P     L  + V+QI +G  H++ ++ EG +Y +G N +GQLGTG  
Sbjct: 211 GQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTGNK 270

Query: 379 QAENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
             +  P  + T   + +  ++ +C + H SA  T+ GQV  WG
Sbjct: 271 SNQLSPVQILTE--KERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 117/247 (47%), Gaps = 28/247 (11%)

Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
           +GD   T+ P  +    G K+  ++ G G H L+ ++ G+++ WG+ G  QLG G+  + 
Sbjct: 56  TGDSLSTIVPKKLDFLSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQG 115

Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
           V                  P+LV    +N         V E+ACG  HS  +TD G +  
Sbjct: 116 VA-----------------PVLVSANLLNKK-------VTEVACGSHHSMALTDTGEVYA 151

Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE-QIAAGLWHTVCISVEGRVYVFGGNQFG 371
           +G+   GQ G GST +Q  P   SS +  +V   I  G   ++ +   G VY +G N  G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNG 211

Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
           QLG G +  +  P  L    L+    + +  G  HS  LT++G + +WG N YGQLG G+
Sbjct: 212 QLGLGNNGNQVTPCRLVG--LQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTGN 269

Query: 432 SIDRNIP 438
             ++  P
Sbjct: 270 KSNQLSP 276



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 99/180 (55%), Gaps = 3/180 (1%)

Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVE 344
           +GR  V      G H  + T+ G L  +G   Y Q G+G+TN  + P   S+ L++ +V 
Sbjct: 72  SGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVT 131

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           ++A G  H++ ++  G VY +G N  GQ+G+G    +  P+ + +  L++K A  + CG 
Sbjct: 132 EVACGSHHSMALTDTGEVYAWGYNNCGQVGSGSTANQPTPRRVSS-CLQNKVAVSIVCGQ 190

Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAE 463
             S  + ++G+V  WG+N  GQLGLG++ ++  P  LV + G   + I  G+ H++ L +
Sbjct: 191 TSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTD 250



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 120/307 (39%), Gaps = 87/307 (28%)

Query: 64  LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE---ASVVKAAAGWAHCVSVT 120
           L  +E G+L  WG     G S L +G   +   P  +        V + A G  H +++T
Sbjct: 88  LLATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALT 144

Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
           + GEVY WG+  C          G  GS    ST  Q         P+ +R         
Sbjct: 145 DTGEVYAWGYNNC----------GQVGS---GSTANQ---------PTPRR--------- 173

Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
                               +S C   L   V ++ +  G   +L + D G+V+GWGY G
Sbjct: 174 --------------------VSSC---LQNKVAVS-IVCGQTSSLAVVDNGEVYGWGYNG 209

Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
            GQLGLG+    V      PC           L+  QG            V++I  G  H
Sbjct: 210 NGQLGLGNNGNQVT-----PC----------RLVGLQGLC----------VQQIVSGYAH 244

Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE- 359
           S  +TD G L  +G   YGQ G G+ ++QL P    +  +  VE  A    HT     + 
Sbjct: 245 SMALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQILTEKERIVEIAACHSTHTSAAKTQS 304

Query: 360 GRVYVFG 366
           G+VY++G
Sbjct: 305 GQVYMWG 311



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 4/167 (2%)

Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVCISVEGRV 362
           +T+   +  FG       G G +   + P     L   +V  ++ G   H +  + +G +
Sbjct: 37  ITNDDEVFVFGLNCSNCLGTGDSLSTIVPKKLDFLSGRKVVSLSYGSGPHILLATEDGEL 96

Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
           + +G N + QLG G       P L+   +L +K+   V+CG+ HS  LT+ G+V +WG+N
Sbjct: 97  FAWGHNGYSQLGNGTTNQGVAPVLVSANLL-NKKVTEVACGSHHSMALTDTGEVYAWGYN 155

Query: 423 KYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
             GQ+G G + ++  P  V   +   +  +I CG   +L + +  ++
Sbjct: 156 NCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEV 202



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 5/117 (4%)

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTE 412
           + I+ +  V+VFG N    LGTG   +  VPK L+   L  ++   +S G+  H  + TE
Sbjct: 35  IYITNDDEVFVFGLNCSNCLGTGDSLSTIVPKKLD--FLSGRKVVSLSYGSGPHILLATE 92

Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAETTQI 467
           DG++ +WG N Y QLG G +     P LV  +    +   +ACG  H++ L +T ++
Sbjct: 93  DGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTGEV 149


>gi|77554672|gb|ABA97468.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554673|gb|ABA97469.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862485|gb|ABG21962.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862486|gb|ABG21963.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 439

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 136/272 (50%), Gaps = 40/272 (14%)

Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL---GLGSRIKMVPTPHLI 259
           P ++    G++I + AAG   T+++SD G+V+ +G    G++     GSR+  V TP L+
Sbjct: 94  PRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYAAQGSRV--VTTPQLV 151

Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
             L+                          Y+ + A G   +AV++  G + TF WG   
Sbjct: 152 ESLKDI------------------------YIVQAAIGNFFTAVLSREGHVYTFSWGNDM 187

Query: 320 QCGHGSTNDQLRPSY-ASSLMDIQVEQIAAGLWHTVCISVE---GRVYVFGGNQFGQLGT 375
           + GH +  + ++P   A  L +I V QIAAG  + + ++ +     VY  G    G+LG 
Sbjct: 188 KLGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGH 247

Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD---- 431
           G    E  P+L+E     + +  VV+ GA H+AV+ +DG+V +WGW +YG LG G+    
Sbjct: 248 GSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECE 307

Query: 432 SIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
           S+ + + SLV +      ++A G + T ++++
Sbjct: 308 SVPKVVESLVNVRAV---HVATGDYTTFVVSD 336



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 156/372 (41%), Gaps = 80/372 (21%)

Query: 59  GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
           G G ++A + SG + T+GS +  GQ    S +    P          +++AAAG    + 
Sbjct: 59  GPGHSIAVTTSGAVYTFGS-NSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTML 117

Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
           V++AG VY +G                     KDS G                       
Sbjct: 118 VSDAGRVYAFG---------------------KDSFG----------------------- 133

Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
                    E E  A G    T +P LV     + I + A G   T +LS  G V+ + +
Sbjct: 134 ---------EVEYAAQGSRVVT-TPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSW 183

Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
           G + +LG  +    V  PHL+     A   ++ P++           AG  Y+  +AC  
Sbjct: 184 GNDMKLGHQTEPNDVQ-PHLL-----AGPLENIPVV--------QIAAGYCYLLALACQ- 228

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL--MDIQVEQIAAGLWHTVCI 356
                     ++ + G GL G+ GHGS  D+  P        ++IQ   +AAG WH   +
Sbjct: 229 ------PSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVV 282

Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
             +GRV  +G  ++G LG G ++ E+VPK++E+  L + RA  V+ G   + V+++ G V
Sbjct: 283 GKDGRVCTWGWGRYGCLGHGNEECESVPKVVES--LVNVRAVHVATGDYTTFVVSDKGDV 340

Query: 417 LSWGWNKYGQLG 428
            S+G  +   LG
Sbjct: 341 YSFGCGESSSLG 352



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 10/169 (5%)

Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
           HS  VT +GA+ TFG    GQ GHGS  ++ RP    SL  I++ Q AAG   T+ +S  
Sbjct: 62  HSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTMLVSDA 121

Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKVV---SCGARHSAVLTEDGQ 415
           GRVY FG + FG+    V+ A    +++ TP ++ES +   +   + G   +AVL+ +G 
Sbjct: 122 GRVYAFGKDSFGE----VEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGH 177

Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLA 462
           V ++ W    +LG     +   P L+  P+       IA G+ + L LA
Sbjct: 178 VYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALA 226



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
           Q  AG  H++ ++  G VY FG N  GQLG G  + E  P+++ +  L+  R    + GA
Sbjct: 55  QAIAGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRS--LQGIRIIQAAAGA 112

Query: 405 RHSAVLTEDGQVLSWGWNKYGQL 427
             + ++++ G+V ++G + +G++
Sbjct: 113 GRTMLVSDAGRVYAFGKDSFGEV 135


>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
 gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
          Length = 1061

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 123/268 (45%), Gaps = 41/268 (15%)

Query: 201 LSPCLVTLNP--GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
           + PCL    P  G+++  V  G  HT +++ MGQ++ +G G  G LG G+R + V  P  
Sbjct: 319 IQPCLRISGPLEGLQVASVTCGPWHTALVTSMGQLFTFGDGTFGVLGHGNR-ENVAYPRE 377

Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA----------- 307
           +  L                       AG   +  +ACG  H+A V +            
Sbjct: 378 VESL-----------------------AGLRTIA-VACGVWHTAAVVEVIVTQSSSSASS 413

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L T+G G   + GHG    +L P+   +L+D    +IA G   TV ++  G V+  G 
Sbjct: 414 GKLFTWGDGDKNRLGHGDKEPRLEPTCVPALIDYNFHKIACGHSLTVGLTTAGHVFTMGS 473

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
             +GQLG      + VP L+E   L  +  + ++CGA H A LT   +V +WG    G+L
Sbjct: 474 TVYGQLGNPCADGK-VPCLVEDK-LYGESVEEIACGAYHVAALTSRNEVYTWGKGANGRL 531

Query: 428 GLGDSIDRNIPSLV-PIHGFLPRNIACG 454
           G GD  DR  P++V  +     + IACG
Sbjct: 532 GHGDGEDRKTPTIVEALKDRHVKYIACG 559



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 121/282 (42%), Gaps = 43/282 (15%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P  +  N  + +  +A G RH  +++  G+V+ WG    G+LG G+            
Sbjct: 267 LLPRPLESNVVLDVHHIACGVRHAAMVTRQGEVFTWGEESGGRLGHGA------------ 314

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
                  GKD    V Q  +  SG      V  + CG  H+A+VT  G L TFG G +G 
Sbjct: 315 -------GKD----VIQPCLRISGPLEGLQVASVTCGPWHTALVTSMGQLFTFGDGTFGV 363

Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI-----------SVEGRVYVFGGNQ 369
            GHG+  +   P    SL  ++   +A G+WHT  +           +  G+++ +G   
Sbjct: 364 LGHGNRENVAYPREVESLAGLRTIAVACGVWHTAAVVEVIVTQSSSSASSGKLFTWGDGD 423

Query: 370 FGQLGTGVDQAENVPKLLET--PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
             +LG G    +  P+L  T  P L       ++CG   +  LT  G V + G   YGQL
Sbjct: 424 KNRLGHG----DKEPRLEPTCVPALIDYNFHKIACGHSLTVGLTTAGHVFTMGSTVYGQL 479

Query: 428 GLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
           G     D  +P LV   ++G     IACG +H   L    ++
Sbjct: 480 G-NPCADGKVPCLVEDKLYGESVEEIACGAYHVAALTSRNEV 520



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 67/162 (41%), Gaps = 25/162 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V         K+A G   T+ L+  G V+  G    GQLG         
Sbjct: 430 GDKEPRLEPTCVPALIDYNFHKIACGHSLTVGLTTAGHVFTMGSTVYGQLG--------- 480

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
                PC    A GK  P LV       S       V+EIACG  H A +T    + T+G
Sbjct: 481 ----NPC----ADGK-VPCLVEDKLYGES-------VEEIACGAYHVAALTSRNEVYTWG 524

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  G+ GHG   D+  P+   +L D  V+ IA G  ++  I
Sbjct: 525 KGANGRLGHGDGEDRKTPTIVEALKDRHVKYIACGANYSAAI 566


>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
          Length = 1199

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)

Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
           C+  L P  K+   A G  HTL+ ++ G+V+  G   EGQLGLG   +   + HLI    
Sbjct: 70  CVKALKPE-KVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDER-NSFHLISFFT 127

Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
                 + +A       L   G +     NS G+ G   +                 I+C
Sbjct: 128 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWISC 187

Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCG---HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           G  HSA VT  G L TFG    G+ G       N ++  S     +  +V Q+A G  HT
Sbjct: 188 GYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPG--IPEKVVQVACGGGHT 245

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTE 412
           V ++ E  VY FG  QFGQLG G    E  VPK++E   ++  +   + CG  H+A++T+
Sbjct: 246 VVLT-EKAVYTFGLGQFGQLGLGTFLFETPVPKVIEH--IKDLKISSIFCGENHTALITD 302

Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
            G + ++G  ++G+LGLG  +  ++  P+L      F+ + +ACG  HTL+ A
Sbjct: 303 LGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVFA 355



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 2/169 (1%)

Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
           ++CG  H+A+VT    L  FG   +GQ G GS +   +P+   +L   +V+  A G  HT
Sbjct: 30  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 89

Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
           +  +  G+VY  GGN  GQLG G     N   L+ +     ++ K +S G+  SA LTED
Sbjct: 90  LVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLI-SFFTSQRKIKQLSAGSNTSAALTED 148

Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
           G++  WG N  GQ+GL +  +  +P  V + G     I+CG++H+  + 
Sbjct: 149 GELFMWGDNSEGQIGLKNITNVCVPQQVTV-GKPISWISCGYYHSAFVT 196



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 36/278 (12%)

Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
           ++ G  HT I++   +++ +G    GQLGLGS+   V  P  +  L     + AA G++ 
Sbjct: 30  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSK-STVNKPTCVKALKPEKVKFAACGRNH 88

Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
            L+  +G        N+ G+ G                  +  +K+++ G   SA +T+ 
Sbjct: 89  TLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTED 148

Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
           G L  +G    GQ G  +  +   P   +  +   +  I+ G +H+  ++ EG +Y FG 
Sbjct: 149 GELFMWGDNSEGQIGLKNITNVCVPQQVT--VGKPISWISCGYYHSAFVTTEGELYTFGE 206

Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
            + G+LG       N       P +  K  + V+CG  H+ VLTE   V ++G  ++GQL
Sbjct: 207 PESGKLGLPKQLLVNHRMPQSVPGIPEKVVQ-VACGGGHTVVLTEKA-VYTFGLGQFGQL 264

Query: 428 GLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
           GLG  + +  +P ++  I      +I CG  HT L+ +
Sbjct: 265 GLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITD 302


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 98/176 (55%), Gaps = 4/176 (2%)

Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
           V +IACG +H+A+VT  G L T+G    G+ GHG   + ++P    ++    V+ +A G 
Sbjct: 281 VLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPRLVEAMASTTVDFVACGE 340

Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
           +HT  +++ G +Y +G   +  G LG G D +  +PK +  P LE  +  +V+CG  H+A
Sbjct: 341 FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGP-LEGLQVALVTCGPWHTA 399

Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
           ++T  GQ+ ++G   +G LG GD  + + P  V  + G     +ACG WHT  + E
Sbjct: 400 LITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVE 455



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 121/245 (49%), Gaps = 17/245 (6%)

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
           G+++  V  G  HT +++  GQ++ +G G  G LG G R + V  P  +  L        
Sbjct: 385 GLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR-ENVSYPREVESLSGL----- 438

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
           R + V  G  +++       V E+      ++V +D   L T+G G   + GHG  + +L
Sbjct: 439 RTIAVACGVWHTAA------VVEVIVTQSSASVSSD--KLFTWGDGDKNRLGHGDKDARL 490

Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
            P+  S L+D    +IA G   TV ++  G V+  G + +GQLG      + VP L++  
Sbjct: 491 EPTCVSLLIDSNFHRIACGHSLTVGLTTSGEVFTMGSSVYGQLGNPQSDGK-VPCLVKDK 549

Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPR 449
            L  +  + ++CGA H AVLT   +V +WG    G+LG GD  DR  P+LV  +     +
Sbjct: 550 -LAGESVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVK 608

Query: 450 NIACG 454
            IACG
Sbjct: 609 YIACG 613



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 121/282 (42%), Gaps = 48/282 (17%)

Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
           L P  +  N  + + ++A G +H  +++  G+++ WG    G+LG G   K V  P L+ 
Sbjct: 268 LLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVG-KNVIQPRLVE 326

Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY-- 318
            +                          + V  +ACG  H+  VT AG L T+G G +  
Sbjct: 327 AM------------------------ASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNA 362

Query: 319 GQCGHGSTNDQLRPS-YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
           G  GHG+      P   A  L  +QV  +  G WHT  I+  G+++ FG   FG LG G 
Sbjct: 363 GLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHG- 421

Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTE-----------DGQVLSWGWNKYGQ 426
              ENV    E   L   R   V+CG  H+A + E             ++ +WG     +
Sbjct: 422 -DRENVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKNR 480

Query: 427 LGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAETT 465
           LG GD   R  P+ V +   +  N   IACG  H+L +  TT
Sbjct: 481 LGHGDKDARLEPTCVSL--LIDSNFHRIACG--HSLTVGLTT 518



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 6/144 (4%)

Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
           D L P    S + + V QIA G+ H   ++ +G ++ +G    G+LG GV +    P+L+
Sbjct: 266 DILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPRLV 325

Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSW--GWNKYGQLGLGDSIDRNIPSLV--PI 443
           E   + S     V+CG  H+  +T  G++ +W  G +  G LG G  +   IP  +  P+
Sbjct: 326 EA--MASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPL 383

Query: 444 HGFLPRNIACGWWHTLLLAETTQI 467
            G     + CG WHT L+  T Q+
Sbjct: 384 EGLQVALVTCGPWHTALITSTGQL 407



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 25/162 (15%)

Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
           GD+   L P  V+L       ++A G   T+ L+  G+V+  G    GQLG         
Sbjct: 484 GDKDARLEPTCVSLLIDSNFHRIACGHSLTVGLTTSGEVFTMGSSVYGQLG------NPQ 537

Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
           +   +PCL      KD+              AG S V+EIACG  H AV+T    + T+G
Sbjct: 538 SDGKVPCLV-----KDK-------------LAGES-VEEIACGAYHVAVLTSKNEVYTWG 578

Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
            G  G+ GHG   D+  P+   +L D  V+ IA G  ++  I
Sbjct: 579 KGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAI 620


>gi|171846900|gb|AAI61455.1| rcc1 protein [Xenopus (Silurana) tropicalis]
          Length = 419

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 160/378 (42%), Gaps = 27/378 (7%)

Query: 93  ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
           E  +P  +     +V+AAAG  H V +  +G +YT+G   C     + RD    GS  + 
Sbjct: 57  ERKKPALVTLPEDIVQAAAGGMHTVCLGASGSIYTFG---CNDEGALGRDTSEEGS--ET 111

Query: 153 STGKQSAL-PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD-EFFTLSPCLVTLNP 210
             GK   +    Q    D          R          N   G  E    S   V +  
Sbjct: 112 QPGKVDLVEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQMQI 171

Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
              + K+A+G  H ++L+  G ++  G G +GQLG       VP             G +
Sbjct: 172 NAPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG------RVPERF---TNRGGRKGLE 222

Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
           R LLV Q     +  +GR + +++ CG   +  V+  G +  FG   Y Q G  +T    
Sbjct: 223 R-LLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKTTQSCF 281

Query: 331 RPSYASSLMDIQVEQI--AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
            P   +S  +     +  + G  HT+C+  EG+VY  G  ++G+LG G    EN  +L E
Sbjct: 282 APQNLTSFKNSTKSWVGFSGGQHHTICVDSEGKVYSLGRAEYGRLGLG----ENAEELSE 337

Query: 389 -TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
            TPI    + K V+CGA  S  ++ DG+V +WG     QLG G+  D   P  +      
Sbjct: 338 PTPIPILPKTKSVACGASVSYAVSNDGRVFAWGMGTNLQLGTGEEEDVWSPQEMTGKQLE 397

Query: 448 PRN---IACGWWHTLLLA 462
            R+   ++ G  HT+LL 
Sbjct: 398 DRDVLSVSSGGQHTVLLV 415



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 83/169 (49%), Gaps = 13/169 (7%)

Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS 357
            HS+  T  G +LT G G  GQ G G    ++ +P+  +   DI   Q AAG  HTVC+ 
Sbjct: 27  NHSSYGTVGGQVLTLGQGDVGQLGLGEDVMERKKPALVTLPEDIV--QAAAGGMHTVCLG 84

Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
             G +Y FG N  G LG   D +E   +     +   ++   VS G  H+A LTEDG+V 
Sbjct: 85  ASGSIYTFGCNDEGALGR--DTSEEGSETQPGKVDLVEKVVQVSAGDSHTAALTEDGRVF 142

Query: 418 SWG--WNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLL 461
            +G   +  G +GL + + +   S+VP+   +      IA G  H +LL
Sbjct: 143 VFGSFRDNNGVIGLLEPMKK---SMVPVQMQINAPVIKIASGNDHLVLL 188



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 106/258 (41%), Gaps = 46/258 (17%)

Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI----PCLEHAAS 267
           VK TKV     H+   +  GQV   G G  GQLGLG  +     P L+      ++ AA 
Sbjct: 21  VKKTKV----NHSSYGTVGGQVLTLGQGDVGQLGLGEDVMERKKPALVTLPEDIVQAAAG 76

Query: 268 GKDRPLLVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVVT 305
           G     L   GS+     N  G  GR                   V +++ G  H+A +T
Sbjct: 77  GMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSETQPGKVDLVEKVVQVSAGDSHTAALT 136

Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ--VEQIAAGLWHTVCISVEGRVY 363
           + G +  FG       G     + ++ S     M I   V +IA+G  H V ++V+G +Y
Sbjct: 137 EDGRVFVFG-SFRDNNGVIGLLEPMKKSMVPVQMQINAPVIKIASGNDHLVLLTVDGDLY 195

Query: 364 VFGGNQFGQLGTGVDQAEN-----------VPKLLETPILESKRAKV--VSCGARHSAVL 410
             G  + GQLG   ++  N           VP+ +      S R     V CGA  +  +
Sbjct: 196 TSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAV 255

Query: 411 TEDGQVLSWGWNKYGQLG 428
           +++G V  +G + Y QLG
Sbjct: 256 SQEGHVYGFGLSNYHQLG 273



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 10/89 (11%)

Query: 385 KLLETPIL--ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLV 441
           K L+  I+  ES    V      HS+  T  GQVL+ G    GQLGLG D ++R  P+LV
Sbjct: 5   KALKRAIVAEESNGTSVKKTKVNHSSYGTVGGQVLTLGQGDVGQLGLGEDVMERKKPALV 64

Query: 442 PIHGFLPRNI---ACGWWHTLLLAETTQI 467
                LP +I   A G  HT+ L  +  I
Sbjct: 65  T----LPEDIVQAAAGGMHTVCLGASGSI 89


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.315    0.133    0.420 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,182,917,794
Number of Sequences: 23463169
Number of extensions: 380229045
Number of successful extensions: 797911
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4432
Number of HSP's successfully gapped in prelim test: 1296
Number of HSP's that attempted gapping in prelim test: 684062
Number of HSP's gapped (non-prelim): 49070
length of query: 467
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 321
effective length of database: 8,933,572,693
effective search space: 2867676834453
effective search space used: 2867676834453
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)