BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012245
(467 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 191/402 (47%), Gaps = 61/402 (15%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 179
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G HT +++ G ++GWG+G G LGLG R T L+P
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP-----------------ER 217
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
V S+G S V ACG RH+ V+ +GAL T+GW YGQ GHG D L P +L
Sbjct: 218 VTSTGGEKMSMV---ACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 274
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+ + QI+ G HT+ ++ +G++Y +G N+FGQ+G G + + P + P + ++
Sbjct: 275 NSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP--DDQKVVQ 332
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
VSCG RH+ +TE V +WG GQLG+G+S+DRN P ++
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 131/252 (51%), Gaps = 29/252 (11%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
P K+ ++AG H++ L V WG G +GQLG G +
Sbjct: 13 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-------------------AE 53
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTND 328
DRP + +++ + + CG H+ + +G + ++GWG +G+ GHG+++D
Sbjct: 54 DRPSPTQLSALDGH------QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD 107
Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
P +L I+++QIA G H + +++EG V +G NQ GQLG G + VP+ ++
Sbjct: 108 LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 167
Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
E R K+V+ GA H+A +TEDG + WGW +YG LGLGD DR +P V G
Sbjct: 168 A--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 225
Query: 449 RN-IACGWWHTL 459
+ +ACGW HT+
Sbjct: 226 MSMVACGWRHTI 237
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 126/330 (38%), Gaps = 54/330 (16%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
VY WG + S + +P+P + G K + G LA + G++ +WG
Sbjct: 89 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDS-HCLAVTMEGEVQSWGR- 146
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + P+ + AAG H +VTE G++Y WGW
Sbjct: 147 NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR------ 200
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EE 188
+G+ G D T + +P ++ R T S +
Sbjct: 201 ----YGNLG--LGDRTDR--LVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK 252
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
GD L P + I++++ G RHT+ L+ G+++GWG+ GQ+G+G+
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGN 312
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
+ P+ VR V +++CG RH+ VT+
Sbjct: 313 NLDQCS-----------------PVQVR--------FPDDQKVVQVSCGWRHTLAVTERN 347
Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
+ +G G GQ G G + D+ P +L
Sbjct: 348 NVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1
SV=2
Length = 4834
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGT 375
YG+ GHGS+ D+ P + L ++V +A +G T+ ++ G+V+ +G +G+LG
Sbjct: 580 YGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Query: 376 GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
G PKL+E L+ V CG++ S LT+DGQV SWG +LG G
Sbjct: 640 GGSDGCKTPKLIEK--LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697
Query: 436 NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
P L+ + G ++A G H L L E +++
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
P L+ + K R +++IACG HSA +T +G L T+G G YG+ GHG QL+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3141
Query: 332 PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
P L+ +V Q+A G T+ ++ EG V+ +G FG+LG G + N+
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3201
Query: 384 ----------------------------------------------PKLLETPILESKRA 397
P+++E L K+
Sbjct: 3202 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3259
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
V+ GA H +T+ GQV +WG N +GQ G G + P+LV + G +ACG
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Query: 457 HTL 459
H++
Sbjct: 3320 HSV 3322
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R +++
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
+ I ++ AA G + G + + G+ GR V
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 293 EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+IACG + +TD + ++G G YG+ G G ++ P SL + V ++ G
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
+V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4264
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
TEDG+V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
+ + S+ G V ++ CG + S +T +GA+ T+G G Y + GHGS + RP
Sbjct: 4189 MKI--DSLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4240
Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
L +V IA G H VC + +G VY +G N GQLG G A P+L+ L
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4298
Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
+ K+ V+CG+ H+ L+W +K G +P+ VP+
Sbjct: 4299 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4333
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 148/367 (40%), Gaps = 51/367 (13%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
V +I CG + S +T +G + T+G G Y + GHGS +P L ++
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3260
Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
+A G H + ++ G+VY +G N GQ G G P L++ LE ++ V+CG+
Sbjct: 3261 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGS 3318
Query: 405 RHSAVLT 411
HS T
Sbjct: 3319 SHSVAWT 3325
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)
Query: 231 GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
G ++GWG+ GQLG G+++K VPTP C A RP+ + G +V +
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4003
Query: 284 GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
GK + ++K++A GG+H ++ G + ++
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063
Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
G G+ GHG+ + RP SL I+V +AAG H+ C++ G +Y +G ++G+L
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
G + + PKL+E L+ R ++CG+ + LT+D V SWG YG+LG G
Sbjct: 4124 GHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 432 SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
S +P + + G + CG ++ L ++
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 37/264 (14%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAA 266
N G I K AAG + +V+ WG + QLG GS+IK +P
Sbjct: 2939 NSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETL 2989
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
S + V ++A G + VT G + G G+ G G +
Sbjct: 2990 SALN--------------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGIS 3029
Query: 327 NDQL-RPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
+ + P ++L V+++A +G H ++V+G+V+ +G G+LG +
Sbjct: 3030 SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3089
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
P+L+E L++KR + ++CG+ HSA LT G++ +WG +YG+LG GD+ + P +V +
Sbjct: 3090 PRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 3147
Query: 444 -HGFLPRNIACGWWHTLLLAETTQ 466
G +ACG LA T +
Sbjct: 3148 LLGHRVIQVACGSRDAQTLALTDE 3171
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+ V ++ CG + S +T G + ++G G +
Sbjct: 653 KLQDLD------------------------VVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
GHG+ P L +V +AAG H + ++ + V+ +G N Q +
Sbjct: 689 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748
Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
+ P L P L++K ++CG S
Sbjct: 749 KPEPAAL--PGLDTKHIVGIACGPAQS 773
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----S 105
K G LA S G++ +WG A+D GK G +P P E+
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 4092
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV AAG AH VT AG++YTWG
Sbjct: 4093 VVDVAAGGAHSACVTAAGDLYTWG 4116
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ ++ VVK
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGD-----YGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T++G VYTWG
Sbjct: 4205 GSQFSVALTKSGAVYTWG 4222
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1
SV=3
Length = 4836
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 28/272 (10%)
Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 541
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
I SGK +V IACG +SA +T G L T+G G Y
Sbjct: 542 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581
Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
G+ GHGS+ D+ P + L ++V +A +G T+ ++ G+V+ +G +G+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
PKL+E L+ V CG++ S LT+DGQV SWG +LG G
Sbjct: 642 GSDGCKTPKLIEK--LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 699
Query: 437 IPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
P L+ + G ++A G H L L E +++
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 133/290 (45%), Gaps = 35/290 (12%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA----- 265
+ + +VA G + ++ G+V+ G G+LGLG VP P I L
Sbjct: 2992 ALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKV 3051
Query: 266 ---ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRH 300
+ G+ L G V S GK G +++IACG H
Sbjct: 3052 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111
Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW--HTVCISV 358
SA +T +G L T+G G YG+ GHG QL+P L+ +V Q+A G T+ ++
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171
Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
EG V+ +G FG+LG G + N+P+ +E L + + CGA+ S LT+ G V +
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSLALTKSGVVWT 3229
Query: 419 WGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
WG Y +LG G + P +V + G ++A G H L + ++ Q+
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 82/303 (27%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
P L+ + K R +++IACG HSA +T +G L T+G G YG+ GHG QL+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3142
Query: 332 PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV------ 383
P L+ +V Q+A G T+ ++ EG V+ +G FG+LG G + N+
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202
Query: 384 ----------------------------------------------PKLLETPILESKRA 397
P+++E L K+
Sbjct: 3203 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKI 3260
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW 456
V+ GA H +T+ GQV +WG N +GQ G G + P+LV + G +ACG
Sbjct: 3261 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Query: 457 HTL 459
H++
Sbjct: 3321 HSV 3323
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVP 254
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R +++
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR--------------------SYVK 292
+ I ++ AA G + G + + G+ GR V
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148
Query: 293 EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+IACG + +TD + ++G G YG+ G G ++ P SL + V ++ G
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
+V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCVCC 4266
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
TEDG+V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 4267 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 73/351 (20%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4103
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4104 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4147
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4148 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4190
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
+ ++S G V ++ CG + S +T +GA+ T+G G Y + GHGS + RP
Sbjct: 4191 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4242
Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
L +V IA G H VC + +G VY +G N GQLG G A P+L+ L
Sbjct: 4243 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--L 4300
Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
+ K+ V+CG+ H+ L+W +K G +P+ VP+
Sbjct: 4301 QGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPM 4335
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 152/373 (40%), Gaps = 63/373 (16%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
GG A + GK+ + G A T+G+ G + P+P + + VVK
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEA--------TNGRLGLGMSSGTVPIPRQITALSSYVVKK 3050
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H ++T G+V++WG D G G F + + K + +
Sbjct: 3051 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3100
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3101 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3161 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3202
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
+N G V +I CG + S +T +G + T+G G Y + GHGS +P L
Sbjct: 3203 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3255
Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
++ +A G H + ++ G+VY +G N GQ G G P L++ LE ++
Sbjct: 3256 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKIT 3313
Query: 399 VVSCGARHSAVLT 411
V+CG+ HS T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 50/274 (18%)
Query: 231 GQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
G ++GWG+ GQLG G+++K VPTP C A RP+ + G +V +
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVK-VPTP----C---EALATLRPVQLIGGEQTLFAVTAD 4005
Query: 284 GKAGRS----------------------------YVKEIAC--GGRHSAVVTDAGALLTF 313
GK + ++K++A GG+H ++ G + ++
Sbjct: 4006 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4065
Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
G G+ GHG+ + RP SL I+V +AAG H+ C++ G +Y +G ++G+L
Sbjct: 4066 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125
Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGA--RHSAVLTEDGQVLSWGWNKYGQLGLGD 431
G + + PKL+E L+ R ++CG+ + LT+D V SWG YG+LG G
Sbjct: 4126 GHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 432 SIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAET 464
S +P + + G + CG ++ L ++
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 35/241 (14%)
Query: 232 QVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
+V+ WG + QLG GS+IK +P S +
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK-------VPSFSETLSALN------------------- 2994
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIA- 347
V ++A G + VT G + + G G+ G G ++ + P ++L V+++A
Sbjct: 2995 -VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 348 -AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
+G H ++V+G+V+ +G G+LG + P+L+E L++KR + ++CG+ H
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSH 3111
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
SA LT G++ +WG +YG+LG GD+ + P +V + G +ACG LA T
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171
Query: 466 Q 466
+
Sbjct: 3172 E 3172
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 29/207 (14%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+ V ++ CG + S +T G + ++G G +
Sbjct: 654 KLQDLD------------------------VIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
GHG+ P L +V +AAG H + ++ + V+ +G N Q +
Sbjct: 690 LGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749
Query: 381 ENVPKLLETPILESKRAKVVSCGARHS 407
+ P L P L+SK ++CG S
Sbjct: 750 KPEPTAL--PGLDSKHIVGIACGPAQS 774
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPTALPGLD 760
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4054 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4106 ACVTAAGDLYTWG 4118
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ ++ VVK
Sbjct: 4152 CGSGDAQTLCLTDDDTVWSWGDGD-----YGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4206
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T++G VYTWG
Sbjct: 4207 GSQFSVALTKSGAVYTWG 4224
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 34/261 (13%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3115
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
P LV ++++ACG HSA ++ G L T+G G YG+ GHG QL+
Sbjct: 3116 PRLVEALRAKK--------IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLK 3167
Query: 332 PSYASSLMDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
P ++L +V Q+A G T+ ++ +G V+ +G FG+LG G + + P +E
Sbjct: 3168 PKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIER 3227
Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
L + CGA+ S LT G+V +WG Y +LG G D+++ PI G R
Sbjct: 3228 --LSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLRGR 3283
Query: 450 ---NIACGWWHTLLLAETTQI 467
++A G H L + + Q+
Sbjct: 3284 RVIHVAVGALHCLAVTDAGQV 3304
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 134/309 (43%), Gaps = 79/309 (25%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4178
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
P LV + S V +IACG HSA +T +G +LT+G G YG+ GHG + DQLR
Sbjct: 4179 PKLVEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 4230
Query: 332 PSYASSLMDIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
P +L+ + IA +G T+CI+ + V+ +G +G+LG G +P +E+
Sbjct: 4231 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 4290
Query: 390 --------------------------------------------------PILESKRAKV 399
L+ K+
Sbjct: 4291 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4350
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHT 458
++ G+ H ++ G+V +WG N GQLG G P LV + G + CG HT
Sbjct: 4351 IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHT 4410
Query: 459 LLLAETTQI 467
L L+ T+Q+
Sbjct: 4411 LALS-TSQL 4418
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 130/271 (47%), Gaps = 32/271 (11%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T S + L P +A G + I+S G+V+ G G G+LGLG VP PH +
Sbjct: 3011 TFSQTISRLRP----IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQL 3065
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P L R +V++ +V+S GG+H+ +T G + ++G G G
Sbjct: 3066 PVL--------RQYVVKKVAVHS--------------GGKHALALTLDGKVFSWGEGEDG 3103
Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
+ GHG+ +P +L ++ +A G H+ IS +G +Y +G ++G+LG G +
Sbjct: 3104 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNT 3163
Query: 380 AENVPKLLETPILESKRAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
+ PKL+ L +R V+CG+R + LTEDG V SWG +G+LG G S +
Sbjct: 3164 TQLKPKLVTA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT 3221
Query: 438 PSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
P + + G I CG +L L ++
Sbjct: 3222 PHEIERLSGIGVVQIECGAQFSLALTRAGEV 3252
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 34/227 (14%)
Query: 233 VWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
++GWG+ GQLG GSRIK PT PC A RP+
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIK-TPT----PC---EALSLLRPV----------------- 4085
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--A 348
++A G + VT G L G+G G+ G G ++ P+ SL + V+++A +
Sbjct: 4086 --QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNS 4143
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G H + ++ EG VY +G + G+LG G + + PKL+E L ++CG+ HSA
Sbjct: 4144 GGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH--LNGMSVADIACGSAHSA 4201
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
+T G VL+WG +YG+LG GDS D+ P LV + G+ +IACG
Sbjct: 4202 AITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4248
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 126/308 (40%), Gaps = 35/308 (11%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQA 165
V +G HC+++T GEVY WG E R + G A + A
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA 4198
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGRH 223
+ A V+ K R GD L P LV G + +A +G
Sbjct: 4199 HSAAITASGHVLTWGKGRYGRL-----GHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQ 4253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
TL ++D VW WG G G+LG G + G P +
Sbjct: 4254 TLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKLPYKI-------E 4289
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
AG VK + CG + S +T +GA+ T+G G + + GHGS + RP ++L ++
Sbjct: 4290 SLAGLGVVK-VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4348
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
IA G H V S G VY +G N GQLG G A P+L+ L+ K V+CG
Sbjct: 4349 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCG 4406
Query: 404 ARHSAVLT 411
+ H+ L+
Sbjct: 4407 SAHTLALS 4414
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 33/203 (16%)
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
GRH L + + WG G + +LG G + + VPT I LE
Sbjct: 625 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTK--IAALEQHC------------- 669
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM 339
V+ + CG +SA +T G LLT+G G Y + GHG+++D+ P+ +L
Sbjct: 670 -----------VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS 718
Query: 340 DIQVEQIA--AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
D V +A +G H++ ++ EG V+ +G +G+LG G P L+E+ R
Sbjct: 719 DHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVES----LPRV 774
Query: 398 KVVSCGARHSAVLTEDGQVLSWG 420
+ V G++ S L+ +GQ+ +WG
Sbjct: 775 QRVFAGSQFSVALSSEGQLYTWG 797
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 147/367 (40%), Gaps = 60/367 (16%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG S+ GK+ G + L G P P LP VVK A G
Sbjct: 3025 AGGSKSLFIVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSG 3081
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG E G G + + K + +A K+
Sbjct: 3082 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 3127
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +++ + E GD L P LVT G ++ +VA G R
Sbjct: 3128 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSR 3187
Query: 223 --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
TL L++ G V+ WG G G+LG G + G D P + + +
Sbjct: 3188 DAQTLALTEDGAVFSWGDGDFGKLGRG-----------------GSEGSDTPHEIER--L 3228
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD 340
+ G V +I CG + S +T AG + T+G G Y + GHG +P L
Sbjct: 3229 SGIG------VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRG 3282
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
+V +A G H + ++ G+VY +G N GQ G+G P L+ L++ V
Sbjct: 3283 RRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG--LDAVFVNRV 3340
Query: 401 SCGARHS 407
+CG+ HS
Sbjct: 3341 ACGSSHS 3347
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
P+++ ++ ++ IA G +S +G+VY G G+LG GV NVP + P+
Sbjct: 3010 PTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPV 3067
Query: 392 LESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
L K V+ G +H+ LT DG+V SWG + G+LG G+ + P LV +
Sbjct: 3068 LRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKI 3127
Query: 449 RNIACGWWHT 458
R++ACG H+
Sbjct: 3128 RDVACGSSHS 3137
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%)
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
C GRH + ++G G + GHG T+ + P+ ++L V+ + G ++
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 682
Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
I+ G + +G + +LG G ++P L+ + G HS LT +G
Sbjct: 683 ITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGL 742
Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLV 441
V +WG YG+LG G+ P LV
Sbjct: 743 VFAWGDGDYGKLGNGNCNGSLQPILV 768
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
R +K++AC +++ G L T W L + P + +E++A
Sbjct: 571 RFQIKQVACCETQMLILSQEGKLYT--WRL--------AKPEAEP--------LPMEEVA 612
Query: 348 AGLWHTVCISVEGR----------VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
++ ++ EGR Y +G + +LG G A VP + LE
Sbjct: 613 HDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPT--KIAALEQHCV 670
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
+ V CG +SA +T G +L+WG Y +LG G+S DR++P+LV
Sbjct: 671 QSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLV 714
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LV + VA +G H+L L+ G V+ WG G G+LG G+
Sbjct: 711 PTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGN------------ 758
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+G +P+LV V+ + G + S ++ G L T WG
Sbjct: 759 -----CNGSLQPILVE----------SLPRVQRVFAGSQFSVALSSEGQLYT--WGKATC 801
Query: 321 CGHGSTNDQLR----PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
GH ++ P SSL ++ +A + H + +S G V+ +G N Q+
Sbjct: 802 LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPA 861
Query: 377 VDQAENVPKLLETPILESK---RAKVVSCGARHSAVLTE 412
+E LL TPIL S A ++C + S V T+
Sbjct: 862 SVSSE---PLLRTPILVSLPTFPASGIACTSAQSLVWTQ 897
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4237 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4291
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
VVK G V++T++G VYTWG G F + G
Sbjct: 4292 AGLGVVKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4329
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4330 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4355
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4356 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4396
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F++A S G+L TWG A G + G P +V A AHC
Sbjct: 779 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 838
Query: 117 VSVTEAGEVYTWG 129
++++ +GEV+ WG
Sbjct: 839 LALSSSGEVFGWG 851
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 90/228 (39%), Gaps = 37/228 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAA-- 110
GC ++ A + G L+TWG +Y G HG + + LPT + VV A
Sbjct: 676 GCSYSAAITCGGNLLTWGRG-----TYARLG-HGNS-DDRSLPTLVVALSDHMVVDVALG 728
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
+G AH +++T G V+ WG D+G G+ + G + E P +
Sbjct: 729 SGDAHSLALTSEGLVFAWG----------DGDYGKLGN--GNCNGSLQPILVESLPRVQR 776
Query: 171 RAGEEVVKRRKTSSAREESENPAS--GDEFFTLS------PCLVTLNPGVKITKVAAGGR 222
+S + + A+ G + S P LV+ +I VA
Sbjct: 777 VFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVA 836
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIK--MVPTPHLIPCLEHAASG 268
H L LS G+V+GWG Q+ S ++ TP L+ ASG
Sbjct: 837 HCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASG 884
Score = 35.4 bits (80), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
L G + CG LA +E G + +WG D G+ + +TP +
Sbjct: 3174 LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGD-FGKLGRGGSEGSDTPHEIERLSGIG 3232
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV+ G +++T AGEV+TWG
Sbjct: 3233 VVQIECGAQFSLALTRAGEVWTWG 3256
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G G +LA + G + WG D L +G + +P + + V + AG
Sbjct: 728 GSGDAHSLALTSEGLVFAWGDGD---YGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFS 784
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTR 141
V+++ G++YTWG C+ V R
Sbjct: 785 VALSSEGQLYTWGKATCLGHQLVER 809
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 40/275 (14%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
DE L P K+ V G RHT+ + D G V+ G GQLG
Sbjct: 18 DEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
H S K +V + N + +ACG H+ + D G + +G
Sbjct: 68 --------HEKSRKKPEQVVALDAQN---------IVAVACGEAHTLALNDKGQVYAWGL 110
Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
GQ G + + +R P SL DIQ+ Q+A G +H++ +S V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
G+D Q + P+L+++ P ++ V+ G HS VLT G + WG NK+GQLGL
Sbjct: 171 LGIDCQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
D DR +P+L+ + I CG HT L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 147/359 (40%), Gaps = 62/359 (17%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRRSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V A G AH +++ + G+VY WG EC+ +V
Sbjct: 72 RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECI---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
R+ S Q + + G +L +A + + ++++
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQT--------- 179
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL P+L
Sbjct: 180 ---SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNL 235
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ L + I CG H+A +T G + TFG G Y
Sbjct: 236 LKSLRSQK------------------------IVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT-VCISVEGRVYVFGGNQFGQLGTG 376
GQ GH ST+ ++ P LM V Q+A G HT + GR+Y FG GQLGTG
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 116/262 (44%), Gaps = 38/262 (14%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
I VA G HTL L+D GQV+ WG +GQLGL + + P I L A
Sbjct: 85 NIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVAC 144
Query: 268 GKDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAV 303
G L + + S N G+ G ++A GG HS V
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV 204
Query: 304 VTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
+T +GA+ FGWG +GQ G ND+ P+ SL ++ I G HT ++ EG
Sbjct: 205 LTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGG 262
Query: 362 VYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSW 419
V+ FG +GQLG E P K+ E L V+CG +H SA + G++ S+
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQVACGRQHTSAFVPSSGRIYSF 319
Query: 420 GWNKYGQLGLGDSIDRNIPSLV 441
G GQLG G + +R P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G YGQ G G +++ L P + ++ +V + GL HTV + +G VY G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG +++ P+ + L+++ V+CG H+ L + GQV +WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
GL S + RNI SL I +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEV 158
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 124/301 (41%), Gaps = 48/301 (15%)
Query: 43 PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFP 99
P ++ D+ +++ CG A LA ++ G++ WG D +GQ L + P
Sbjct: 75 PEQVVALDA-QNIVAVACGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 132
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK 156
++ +V+ A G+ H +++++A EV+ WG + +G G QK ++ +
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCQKQTSPQ 182
Query: 157 QSA----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
+P Q + + R + DE P L+
Sbjct: 183 LIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KI + G HT L+ G V+ +G GG GQLG S T H I R
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRK 287
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
+ GS+ V ++ACG +H SA V +G + +FG G GQ G GST+++
Sbjct: 288 VFELMGSI----------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337
Query: 332 P 332
P
Sbjct: 338 P 338
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 123/244 (50%), Gaps = 34/244 (13%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLG------------ 226
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ +G N V+ +ACGG HSA++T G L TFG G +G
Sbjct: 227 ----HTES-KDDPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 273
Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVD 378
Q GH ST ++LRP + L+ +V QIA G WHT+ +S G+V+ FG + GQLG G
Sbjct: 274 QLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333
Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRN 436
+ + +P L + S+ K+ S + ++ G +L W + + L R
Sbjct: 334 RDQLMP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRT 387
Query: 437 IPSL 440
IP+L
Sbjct: 388 IPTL 391
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 40/260 (15%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P + L +KI V G H LILS G+ + + L S ++
Sbjct: 87 TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQ---------- 136
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
+ +I CG HS ++ G L +G L+GQ
Sbjct: 137 --------------------------EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQL 170
Query: 322 GHGSTN-DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
G G P L + + QI+AG H++ +S+ G +Y +G N+ GQLG G ++
Sbjct: 171 GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTES 230
Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
++ P L+E L++++ + V+CG HSA+LT+DG + ++G K+GQLG + + P L
Sbjct: 231 KDDPSLIEG--LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCL 288
Query: 441 VP-IHGFLPRNIACGWWHTL 459
V + G+ IACG WHTL
Sbjct: 289 VAELVGYRVTQIACGRWHTL 308
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 12/136 (8%)
Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE---- 388
+ S L + ++ QI G +H++ +S G ++ +G N GQLG G + P+++E
Sbjct: 131 FESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAG 190
Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
P+ + +S G HS L+ G + SWG N+ GQLGLG + ++ PSL+ +
Sbjct: 191 VPLAQ------ISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQK 244
Query: 448 PRNIACGWWHTLLLAE 463
+ACG H+ LL +
Sbjct: 245 VEFVACGGSHSALLTQ 260
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 40/270 (14%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E +++ G H +++++ GE++ WG + V R F S + Q + +P
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S + E G P L+ K+ VA GG
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+ +L+ G ++ +G G GQLG S L PCL G
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVGYR------------ 296
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLR--PSYASSLM 339
V +IACG H+ A V+D G + +FG G GQ G+G T DQL P SS
Sbjct: 297 --------VTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSE 348
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
++++E HT S + + + GGNQ
Sbjct: 349 ELKLES------HT---SEKELIMIAGGNQ 369
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 52/230 (22%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVV 107
K + CG +LA S+ G+L WG + GQ L G+ TP+ +
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLA 194
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWREC-------------------VPSAKVTRDFGSAGS 148
+ +AG AH ++++ +G +Y+WG EC + + KV +F + G
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKV--EFVACG- 251
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
G SAL T+ AG K + ++E L PCLV
Sbjct: 252 ------GSHSALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAE 291
Query: 209 NPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
G ++T++A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 292 LVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
+G+ GQ G GST +Q P + L + V IA G ++ + G VYV+G N G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNG 235
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
QLG G + N P L+ R + V+CG H+ VLT++GQ+ +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 293
Query: 432 SIDRNIPSLVPI 443
+++ P+ V +
Sbjct: 294 KSNQSYPTPVVV 305
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 34/225 (15%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
CL++ V IACG S V D G + +G+
Sbjct: 199 TGCLQNKV------------------------VMNIACGQMCSMAVVDTGEVYVWGYNGN 234
Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
GQ G GS+ +Q P ++L I+V+++A G HT+ ++ EG++Y +G N +GQLGTG
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294
Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
++ P TP++ K ++ +C + H SA T+ G V WG
Sbjct: 295 SNQSYP----TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 3/172 (1%)
Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
G H + T G + T+G Y Q G+G+TN L P + S+ L + QV ++A G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
+ +G V+ +G N GQ+G+G + +P+ + T L++K ++CG S + + G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVMNIACGQMCSMAVVDTGEV 226
Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
WG+N GQLGLG S ++ P V + G + +ACG+ HTL+L + QI
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQI 278
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTANQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ V+ A G ++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 232
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 125/252 (49%), Gaps = 30/252 (11%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
+G+ GQ G GST +Q P + L + V IA G ++ + G VYV+G N G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNG 235
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
QLG G + N P L+ R + V+CG H+ VLT++GQ+ +WG N YGQLG G+
Sbjct: 236 QLGLG--SSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 293
Query: 432 SIDRNIPSLVPI 443
+++ P+ V +
Sbjct: 294 KSNQSYPTPVVV 305
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 113/225 (50%), Gaps = 34/225 (15%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
CL++ V IACG S V D G + +G+
Sbjct: 199 TGCLQNKV------------------------VMSIACGQMCSMAVVDTGEVYVWGYNGN 234
Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
GQ G GS+ +Q P ++L I+V+++A G HT+ ++ EG++Y +G N +GQLGTG
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294
Query: 379 QAENVPKLLETPILESKR--AKVVSCGARH-SAVLTEDGQVLSWG 420
++ P TP++ K ++ +C + H SA ++ G V WG
Sbjct: 295 SNQSYP----TPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 3/172 (1%)
Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
G H + T G + T+G Y Q G+G+TN L P + S+ L + QV ++A G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
+ +G V+ +G N GQ+G+G + +P+ + T L++K ++CG S + + G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVMSIACGQMCSMAVVDTGEV 226
Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
WG+N GQLGLG S ++ P V + G + +ACG+ HTL+L + QI
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQI 278
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 208 MSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 32.7 bits (73), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTANQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ V+ A G ++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYN 232
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 40/275 (14%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
DE L P K+ V G RHT+ + D G V+ G GQLG
Sbjct: 18 DEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
H S K +V + N + ++CG H+ + D G + +G
Sbjct: 68 --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110
Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
GQ G + + +R P SL DIQ+ Q+A G +H++ +S V+ +G N++GQLG
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
G++ Q + P+L+++ P ++ V+ G HS VLT G + WG NK+GQLGL
Sbjct: 171 LGIECQKQTSPQLIKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
D DR +P+L+ + I CG HT L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 150/366 (40%), Gaps = 76/366 (20%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V + G AH +++ + G+VY WG EC+ +V
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECI---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPP-----SDK--RAGEEVVKRRKTSSAREESEN 191
R+ S Q + + G +L +A +K + G + +++T
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQT--------- 179
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL
Sbjct: 180 ----------SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
P+L+ L + I CG H+A +T G +
Sbjct: 230 RY-VPNLLKSLRSQK------------------------IVYICCGEDHTAALTKEGGVF 264
Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT-VCISVEGRVYVFGGNQF 370
TFG G YGQ GH ST+ ++ P LM V QIA G HT + GR+Y FG
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 371 GQLGTG 376
GQLGTG
Sbjct: 325 GQLGTG 330
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 111/234 (47%), Gaps = 33/234 (14%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
++I +VA G H+L LS +V+ WG GQLGLG + +P LI L
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL--------- 187
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
G ++ ++A GG HS V+T +GA+ FGWG +GQ G ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230
Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
P+ SL ++ I G HT ++ EG V+ FG +GQLG E P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290
Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
L ++CG +H SA + G++ S+G GQLG G + +R P V
Sbjct: 291 ---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 14/165 (8%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G YGQ G G +++ L P + ++ +V + GL HTV + +G VY G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG +++ P+ + L+++ VSCG H+ L + GQV +WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
GL S + RNI SL I +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 48/301 (15%)
Query: 43 PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFP 99
P ++ D+ +++ CG A LA ++ G++ WG D +GQ L + P
Sbjct: 75 PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 132
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK 156
++ +V+ A G+ H +++++A EV+ WG + +G G QK ++ +
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIECQKQTSPQ 182
Query: 157 QSA----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
+P Q + + R + DE P L+
Sbjct: 183 LIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KI + G HT L+ G V+ +G GG GQLG S T H I R
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRK 287
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
+ GS+ V +IACG +H SA V +G + +FG G GQ G GST+++
Sbjct: 288 VFELMGSI----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337
Query: 332 P 332
P
Sbjct: 338 P 338
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 144/294 (48%), Gaps = 43/294 (14%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTL+ ++ G+V+ G EGQLGLG + T HLI
Sbjct: 80 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGD-TEERSTFHLISFFT 137
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+ +A L G + NS G+ G V I+C
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISC 197
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL----MDIQVEQIAAGLWH 352
G HSA VT G L TFG +CG +QL ++ + +V Q+A G H
Sbjct: 198 GYYHSAFVTTEGQLYTFGEP---ECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGH 254
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLT 411
TV ++ E VY FG QFGQLG G E +VPK +E ++ ++ ++CG H+A++T
Sbjct: 255 TVVLT-EKAVYTFGLGQFGQLGLGTFLFETSVPKAIEH--IKDQKISFIACGENHTALIT 311
Query: 412 EDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
+ G + ++G ++G+LGLG +S ++ IP+L F+ + ++CG HTL+ A
Sbjct: 312 DMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
++CG H+AVVT L FG +GQ G GS + +P+ +L +V+ A G HT
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ + G+VY GGN GQLG G D E L + ++ K +S G+ SA LTED
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTED 158
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
G++ WG N GQ+GL + + +P V + G I+CG++H+ + Q+
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTV-GKPISWISCGYYHSAFVTTEGQL 211
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK----AAAGW 113
G + A +E G+L WG + EGQ L E +P + +V K + G+
Sbjct: 147 AGSNTSAALTEDGELFMWGD-NSEGQIGL------ENVTNVCVPQQVTVGKPISWISCGY 199
Query: 114 AHCVSVTEAGEVYTWGWREC 133
H VT G++YT+G EC
Sbjct: 200 YHSAFVTTEGQLYTFGEPEC 219
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
+G+ GQ G GST +Q P + L + V IA G + + G VYV+G N G
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
QLG G + N P L+ R + V+CG H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293
Query: 432 SIDRNIPSLVPI 443
+++ P+ V +
Sbjct: 294 KSNQSYPTPVTV 305
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
CL++ V IACG V D G + +G+
Sbjct: 199 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 234
Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
GQ G G++ +Q P ++L I+V+++A G HT+ ++ EG+VY +G N +GQLGTG
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294
Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
++ P TP+ +E R ++ +C + H SA T+ G V WG
Sbjct: 295 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)
Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
K+IAC G H + T G + T+G Y Q G+G+TN L P + S+ L + QV ++
Sbjct: 98 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
A G +H++ ++ +G V+ +G N GQ+G+G + +P+ + T L++K ++CG
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 216
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
+ + G+V WG+N GQLGLG+S ++ P V + G + +ACG+ HTL+L +
Sbjct: 217 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 466 QI 467
Q+
Sbjct: 277 QV 278
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 30/252 (11%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQCGHGSTNDQLRPSYAS-SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
+G+ GQ G GST +Q P + L + V IA G + + G VYV+G N G
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
QLG G + N P L+ R + V+CG H+ VLT++GQV +WG N YGQLG G+
Sbjct: 236 QLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293
Query: 432 SIDRNIPSLVPI 443
+++ P+ V +
Sbjct: 294 KSNQSYPTPVTV 305
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 34/225 (15%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
CL++ V IACG V D G + +G+
Sbjct: 199 TGCLQNKV------------------------VVTIACGQMCCMAVVDTGEVYVWGYNGN 234
Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
GQ G G++ +Q P ++L I+V+++A G HT+ ++ EG+VY +G N +GQLGTG
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294
Query: 379 QAENVPKLLETPI-LESKR-AKVVSCGARH-SAVLTEDGQVLSWG 420
++ P TP+ +E R ++ +C + H SA T+ G V WG
Sbjct: 295 SNQSYP----TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 7/182 (3%)
Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
K+IAC G H + T G + T+G Y Q G+G+TN L P + S+ L + QV ++
Sbjct: 98 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
A G +H++ ++ +G V+ +G N GQ+G+G + +P+ + T L++K ++CG
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 216
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
+ + G+V WG+N GQLGLG+S ++ P V + G + +ACG+ HTL+L +
Sbjct: 217 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 466 QI 467
Q+
Sbjct: 277 QV 278
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 40/275 (14%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
DE L P ++ V G RHT+ + D G V+ G GQLG
Sbjct: 18 DEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---------- 67
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
H S K +V + N + ++CG H+ + D G + +G
Sbjct: 68 --------HEKSRKKPEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGL 110
Query: 316 GLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
GQ G + + +R P SL DIQ+ Q+A G +H++ +S V+ +G N++GQLG
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 375 TGVD-QAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
G D + + P+LL++ P ++ V+ G HS VLT G + WG NK+GQLGL
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQ------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
D DR +P+L+ + I CG HT L +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L+ L
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL--------- 187
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
G ++ ++A GG HS V+T +GA+ FGWG +GQ G ND+
Sbjct: 188 --------------LGIPFM-QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDR 230
Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLE 388
P+ SL ++ I G HT ++ EG V+ FG +GQLG E P K+ E
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 290
Query: 389 TPILESKRAKVVSCGARH-SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
L ++CG +H SA + G++ S+G GQLG G + +R P V
Sbjct: 291 ---LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 148/359 (41%), Gaps = 62/359 (17%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKRVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V + G AH +++ + G+VY WG EC+ +V
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECI---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
R+ S Q + + G +L +A + + + ++++
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT--------- 179
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL P+L
Sbjct: 180 ---SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNL 235
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ L + I CG H+A +T G + TFG G Y
Sbjct: 236 LKSLRSQK------------------------IVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 319 GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT-VCISVEGRVYVFGGNQFGQLGTG 376
GQ GH ST+ ++ P LM V +IA G HT + GR+Y FG GQLGTG
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G +GQ G G +++ L P + ++ +V + GL HTV + +G VY G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG +++ P+ + L+++ VSCG H+ L + GQV +WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
GL S + RNI SL I +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 121/300 (40%), Gaps = 46/300 (15%)
Query: 43 PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P ++ D+ +++ CG A LA ++ G++ WG D + S + P
Sbjct: 75 PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS 133
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQS 158
++ +V+ A G+ H +++++A EV+ WG + +G G+ K T Q
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQL 183
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
P AG S A R + DE P L+ K
Sbjct: 184 LKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I + G HT L+ G V+ +G GG GQLG S T H I R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
GS+ V EIACG +H SA V +G + +FG G GQ G GST+++ P
Sbjct: 289 FELMGSI----------VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 128/282 (45%), Gaps = 54/282 (19%)
Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
GV++ V +G H+L+++ G++W WG +GQLG G K V P LI L H A
Sbjct: 145 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEALSHEA-- 201
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
+ ACG H+ +TD G++ FG GQ G G+ D
Sbjct: 202 ----------------------IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTD 239
Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
+ PS A + + Q + ++A G ++ + +G +Y FG ++GQLG D
Sbjct: 240 AV-PSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 298
Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
E VP+ + I ++K ++ V+CGA H+ VL +V SWG+ YG
Sbjct: 299 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 358
Query: 426 QLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAET 464
+LG + D +P LV + F R I G+ + ++E
Sbjct: 359 RLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEV 400
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 136/336 (40%), Gaps = 68/336 (20%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
R E GD +P L+ I A G HTL L+D G V+ +G GQLG
Sbjct: 174 RNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLG 233
Query: 246 LGSRIKMVPTPHLI-----PCLEHAASGKDRPLLVRQGSV-------------NSSGK-- 285
LG++ VP+P I P + A + L+ +G++ NS GK
Sbjct: 234 LGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFI 293
Query: 286 -------------------------------AGRSYVKEIACGGRHSAVVTDAGALLTFG 314
V+++ACG H+ V+ + ++G
Sbjct: 294 ARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWG 353
Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
+G YG+ GH D++ P L D QI AG + +S G ++ +G
Sbjct: 354 FGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTS 412
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN-KYGQLGLG 430
+ ++ PK ++ L R + ++CG + S ++ D +SWG + +G+LG G
Sbjct: 413 R------ESTMYPKAVQD--LCGWRIRSLACG-KSSIIVAADESTISWGPSPTFGELGYG 463
Query: 431 DSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLAE 463
D ++ + + + G +A G+ H+L++A
Sbjct: 464 DHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIAR 499
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 132
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRP 332
K + + +++CG H + G T+G +GQ G G Q P
Sbjct: 133 -----------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASP 181
Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
SL I + Q+AAG H+ +S+ G V+ +G N GQLG ++ P +L
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLL 239
Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNI 451
+++ +SCG H+AVLT+ G V ++G GQLG D P ++ + G I
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299
Query: 452 ACGWWHTL 459
ACG HTL
Sbjct: 300 ACGRQHTL 307
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 158/377 (41%), Gaps = 75/377 (19%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLGL KDR P V+ V I+CG H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253
Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVE 359
+AV+T +G + TFG G GQ GH S ND++ P LM +V QIA G HT+ +
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313
Query: 360 GRVYVFGGNQFGQLGTG 376
G +Y FG GQLGTG
Sbjct: 314 GLIYAFGCGARGQLGTG 330
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ +VA GG H++ L + G+V+ G +GQLG H G ++P
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKP- 75
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P 332
G ++ +ACG HS ++D G L ++G G GQ G +T D + P
Sbjct: 76 -------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVP 128
Query: 333 SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPI 391
L + Q++ G WH + ++ +G+ + +G N GQLG G + ++ P+ + +
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-- 186
Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN- 450
LE V+ G HS L+ G V WG N GQLGL D DR P H L R
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE----SPCHVKLLRTQ 242
Query: 451 ----IACGWWHTLLLAET 464
I+CG HT +L ++
Sbjct: 243 KVVYISCGEEHTAVLTKS 260
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
+L +G+ GQ G STN Q P + D V+++A G H+V + +G VY G
Sbjct: 1 MLCWGYWSLGQPG-ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
N GQLG ++ N P+ + L + V+CG HS L++ GQ+ SWG GQ
Sbjct: 60 LNTKGQLGH--EREGNKPE--QIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 427 LGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
LGL + D +P L+ ++ ++CG WH L LA Q
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQF 158
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 118/254 (46%), Gaps = 32/254 (12%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK---------- 129
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYA 335
+ +++CG HS ++ + ++G +GQ G G Q P
Sbjct: 130 --------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175
Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---- 391
SL I + Q+AAG H+ +S+ G + +G N GQL NVP P+
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS---GRNVPVQSNKPLSVGA 232
Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
L++ +SCG H+AVLT+DG+V ++G N+ GQLG + ++ P LV L I
Sbjct: 233 LKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQI 292
Query: 452 ACGWWHTLLLAETT 465
CG +HTL TT
Sbjct: 293 DCGSYHTLAYVHTT 306
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 36/222 (16%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
++TLN +KI +V+ G H+L LS QV+ WG GQLGLG +P + LE
Sbjct: 122 IMTLN-DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEG 180
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCG 322
PL ++A GG HS ++ G +FGWG GQ
Sbjct: 181 I------PL------------------AQVAAGGAHSFALSLCGT--SFGWGSNSAGQLA 214
Query: 323 HGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
N + +P +L ++ V I+ G HT ++ +G+V+ FG N+ GQLG
Sbjct: 215 LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTP 274
Query: 380 AENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
+ P+L+E + CG+ H+ A + GQV+S+G
Sbjct: 275 EKRGPQLVERI---DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 128/317 (40%), Gaps = 85/317 (26%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAA 110
D+ G +LA G++ WG A EGQ L G+ E TP+ + +++ +
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWG-AGSEGQ--LGIGEFKEISFTPKKIMTLNDIKIIQVS 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++++ +V++WG G G GK+ P+ QA P
Sbjct: 135 CGHYHSLALSKDSQVFSWG----------KNSHGQLG------LGKE--FPS-QASPQRV 175
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
R+ E G+ + +VAAGG H+ LS
Sbjct: 176 RSLE------------------------------------GIPLAQVAAGGAHSFALSLC 199
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G +GWG GQL L R VP ++PL V G++ + G
Sbjct: 200 GTSFGWGSNSAGQLALSGR--NVPV------------QSNKPLSV--GALKNLG------ 237
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V I+CG H+AV+T G + TFG GQ G+ T ++ P + D V QI G
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGS 296
Query: 351 WHTVC-ISVEGRVYVFG 366
+HT+ + G+V FG
Sbjct: 297 YHTLAYVHTTGQVVSFG 313
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
G D L R+ + S G + + + A G RHS ++ +L+ G GQ G
Sbjct: 6 GADSRELQRRRTAGSPG----AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQ 61
Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKL 386
P +L + V+ ++ G H++ + +GRV+ +G GQLG G + PK
Sbjct: 62 RGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKK 121
Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
+ T L + VSCG HS L++D QV SWG N +GQLGLG
Sbjct: 122 IMT--LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 163
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
++ Q A+G H++ + RV G N GQLG Q +P+ ++ LE+ +VS
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLIVDLVS 81
Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLVPIHGFLPRNIACGWWHTL 459
CG HS + G+V +WG GQLG+G+ I ++ ++ ++CG +H+L
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSL 141
Query: 460 LLAETTQI 467
L++ +Q+
Sbjct: 142 ALSKDSQV 149
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 41/211 (19%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+++ G H ++ AG + ++G G +GQ GHG+ +L P +L +++ ++AAG
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGG 222
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGV-----DQAEN----------------------- 382
WH+VC+S G +Y++G N+ GQL ++AE
Sbjct: 223 WHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAP 282
Query: 383 --------VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID 434
P LL+ P+ A + SCG+RH+AV+T G++ +WGW KYGQLG DS
Sbjct: 283 AHFIAIQPFPALLDLPL--GSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTS 340
Query: 435 RNIPSLVPI---HGFLPRNIACGWWHTLLLA 462
+ P V R + CG W+T + A
Sbjct: 341 LDRPCCVEYFVERQLEVRAVTCGPWNTYVYA 371
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+++ KVAAGG H++ LS+ G ++ WG+ GQL L +R
Sbjct: 202 LEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREE 261
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI-----------ACGGRHSAVVTDAGA 309
E G L V + A + + + +CG RH+AVVT G
Sbjct: 262 ATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGE 321
Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE--QIAAGLWHTVCISVE 359
L T+GWG YGQ GH + RP ++ Q+E + G W+T ++E
Sbjct: 322 LYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYAME 373
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+++V Q+ G H + + G+V+ +G + GQLG G +AE P+LLE L+ R
Sbjct: 160 ELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEA--LQGLRMAK 217
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
V+ G HS L+E G + WGWN+ GQL L
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNESGQLAL 247
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 141/378 (37%), Gaps = 78/378 (20%)
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q+ + H P PL + + +AGW++ VT G V G +A RD
Sbjct: 19 QALGSGNSHHSVYSPEPLHASDDICQVSAGWSYTALVTRGGRVELSG--SVSGAADGCRD 76
Query: 143 FGSAGSFQKDSTGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESENPASGDE---F 198
++ K + QA P GE + + S A+ + E+ S +
Sbjct: 77 VWASEELLVLLRNKGGSSTEVQAWVPGSALQGEPLWVQNLVSGAKGQGEDEPSRESRMGT 136
Query: 199 FTLSPC---LVT--------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L PC VT L P +++ ++ G H L+L GQV+ WG G GQLG G
Sbjct: 137 LPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG 196
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
+ ++ P L+ L+ K +A GG HS +++
Sbjct: 197 T-LEAELEPRLLEALQGLRMAK------------------------VAAGGWHSVCLSET 231
Query: 308 GALLTFGWGLYGQCG----HGSTN------------DQLRPSYA---------------- 335
G + +GW GQ G+ N D L+ A
Sbjct: 232 GDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPF 291
Query: 336 SSLMDIQVEQIAA----GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
+L+D+ + A G HT ++ G +Y +G ++GQLG + + P +E +
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFV 351
Query: 392 LESKRAKVVSCGARHSAV 409
+ V+CG ++ V
Sbjct: 352 ERQLEVRAVTCGPWNTYV 369
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 49/201 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G L +G++ +WG+ G+HG+ E P EA + K
Sbjct: 169 GAEHVLLLCAAGQVFSWGA-----------GRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E Q ALPT +
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG--T 253
Query: 169 DKRAGEEVVKRRKTSSAREESENPASG--DEFFTLS--PCLVTLNPGVKITKVAAGGRHT 224
+ +A E +EE +G F + P L+ L G + G RHT
Sbjct: 254 ENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHT 313
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 314 AVVTRTGELYTWGWGKYGQLG 334
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
P+ R + + GA H +L GQV SWG ++GQLG G P L+ + G
Sbjct: 156 PLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRM 215
Query: 449 RNIACGWWHTLLLAETTQI 467
+A G WH++ L+ET I
Sbjct: 216 AKVAAGGWHSVCLSETGDI 234
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 136/293 (46%), Gaps = 41/293 (13%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
CG HSA VT G L FG G+ G + + P S + + +V Q+A G HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHT 255
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTE 412
V ++ E VY FG QFGQLG G E + PK++E + + +SCG H+A++T+
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHTALITD 312
Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
G + ++G ++G+LGLG + + IP+L F+ + +ACG H ++ A
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
++CG HSAVVT L FG +GQ G GS + +P+ +L +V+ A G HT
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ + G VY GGN GQLG G + N ++ E K K +S G+ SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
G++ WG N GQ+GL + + +P V I G I+CG++H+ +
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHSAFVT 206
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 50/285 (17%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
++ G H+ +++ +++ +G GQLGLGS+ + P + L + AA G++
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98
Query: 272 PLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
L+ +G N+ G+ G +K+++ G SA +T+
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158
Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
G L +G GQ G + ++ P + + V I+ G +H+ ++ +G +YVFG
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216
Query: 368 NQFGQLGTGVDQAENVPKLL----ETPILES---KRAKVVSCGARHSAVLTEDGQVLSWG 420
+ G+LG +P L TP L S ++ V+CG H+ VLTE+ V ++G
Sbjct: 217 PENGKLG--------LPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENA-VYTFG 267
Query: 421 WNKYGQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
++GQLGLG + + + P ++ I I+CG HT L+ +
Sbjct: 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITD 312
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
+ +D+ + SY I+CG H+A++TD G + TFG G +G+
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGKL 327
Query: 322 GHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
G G N + P+ S+ + V+ +A G H V + R
Sbjct: 328 GLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHR 369
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 23/106 (21%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
F T P ++ I+ ++ G HT +++D+G ++ +G G G+LGLG T H
Sbjct: 281 FETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLE---NFTNH 337
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
IP L R VK +ACGG H V
Sbjct: 338 FIPTL--------------------CSNFLRFIVKLVACGGCHMVV 363
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 121/265 (45%), Gaps = 61/265 (23%)
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
GGE Q+G +P L+PC S RP R A +++ G
Sbjct: 126 GGEAQIG------RLP---LLPCARAYVS--PRPPFYRP-------LAPELRARQLELGA 167
Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H+ ++ AG + ++G G +GQ GHG+ +L P +L + + ++AAG WH+VC+S
Sbjct: 168 EHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSE 227
Query: 359 EGRVYVFGGNQFGQL-----------------GTGVDQ---------------------A 380
G +Y++G N+ GQL TG+++
Sbjct: 228 TGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAV 287
Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
+ P LL+ P+ A VSCG+RH+AV+T G++ +WGW KYGQLG D+ + P
Sbjct: 288 QPFPALLDLPL--GSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRR 345
Query: 441 VPIH---GFLPRNIACGWWHTLLLA 462
V + + CG W+T + A
Sbjct: 346 VEYFVDKQLQVKAVTCGPWNTYVYA 370
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAVV 304
E +D + R G V A G VK ++CG RH+AVV
Sbjct: 257 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVK-VSCGSRHTAVV 315
Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD--IQVEQIAAGLWHTVCISVE 359
T G L T+GWG YGQ GH T P +D +QV+ + G W+T +VE
Sbjct: 316 TRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 372
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 316 TRTGELYTWGWGKYGQLG 333
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 144/377 (38%), Gaps = 82/377 (21%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FG 144
L SG+ + P PL V + +A W++ VT G V +A RD +
Sbjct: 21 LGSGRGHQVHSPSPLRAGVDVCRVSASWSYTAFVTRGGRVELS--GSASGAAGGCRDAWA 78
Query: 145 SAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF--FTL 201
S G G AL AP S R GE + A EE ++P + L
Sbjct: 79 SEGLLLVLRAGPGPEALLQAWAPDSALR-GEPLWAHSVVPEAVEE-DDPGGEAQIGRLPL 136
Query: 202 SPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
PC L P ++ ++ G H L+L GQV+ WG G GQLG G+ +
Sbjct: 137 LPCARAYVSPRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-L 195
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
+ P L+ L+ + E+A GG HS V++ G +
Sbjct: 196 EAELEPRLLEALQGLT------------------------MAEVAAGGWHSVCVSETGDI 231
Query: 311 LTFGWGLYGQCGHGSTN-------------------DQLR-----------PSYA----S 336
+GW GQ + N Q++ P A
Sbjct: 232 YIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFP 291
Query: 337 SLMDIQV----EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
+L+D+ + +++ G HT ++ G +Y +G ++GQLG + + P+ +E +
Sbjct: 292 ALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVD 351
Query: 393 ESKRAKVVSCGARHSAV 409
+ + K V+CG ++ V
Sbjct: 352 KQLQVKAVTCGPWNTYV 368
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
P+ RA+ + GA H+ +L GQV SWG ++GQLG G P L+ + G
Sbjct: 153 PLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTM 212
Query: 449 RNIACGWWHTLLLAETTQI 467
+A G WH++ ++ET I
Sbjct: 213 AEVAAGGWHSVCVSETGDI 231
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 52/279 (18%)
Query: 212 VKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
V+++ V +G H+LI++ G++W WG +GQLG G K + P LI L
Sbjct: 121 VQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGD-TKRLEAPKLIEGL------- 172
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
G + ACG H+ +T+ G + TFG GQ G G+ D
Sbjct: 173 -----------------GEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDA 215
Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD----------- 378
+ + ++A G ++ + +G +Y FG ++GQLG D
Sbjct: 216 VLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIE 275
Query: 379 -QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYGQL 427
E +P+ + I ++K +V V+CGA H+ VL +V SWG+ YG+L
Sbjct: 276 FDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRL 335
Query: 428 GLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAE 463
G + D +P LV + F R I CG+ + L+E
Sbjct: 336 GHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSE 374
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 118/270 (43%), Gaps = 19/270 (7%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
LSP + N G I KVA G ++I+ G ++ +G GQLG S K + I
Sbjct: 216 VLSPATIQYN-GQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRI 274
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
+ + + + + +++ACG H+ V+ + ++G+G YG
Sbjct: 275 E-FDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYG 333
Query: 320 QCGHGSTNDQLRPSYASSLMDIQ---VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
+ GH D++ P L D QI G + +S G ++ +G +
Sbjct: 334 RLGHAEQKDEMVPRLV-KLFDFPGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSR---- 388
Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN-KYGQLGLGDSIDR 435
++ PK ++ L + + ++CG + S ++ D +SWG + +G+LG GD+ +
Sbjct: 389 --ESTMYPKAVQD--LCGWKIRSLACG-KSSIIVAADDSTISWGPSPTFGELGYGDNKPK 443
Query: 436 NIPS---LVPIHGFLPRNIACGWWHTLLLA 462
+ + + + G + G+ H+L++A
Sbjct: 444 SSTTAQEVKTLDGVYSEQVVMGYSHSLVIA 473
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 54/282 (19%)
Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
GV++ V +G H+L+++ G++W WG +GQLG G K V P LI L H
Sbjct: 147 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEV-- 203
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
+ ACG H+ +T+ G++ FG GQ G G+ D
Sbjct: 204 ----------------------IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 241
Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
+ PS A + + Q + ++A G ++ + +G +Y FG ++GQLG D
Sbjct: 242 AV-PSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 300
Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
E VP+ + I ++K ++ V+CGA H+ VL +V SWG+ YG
Sbjct: 301 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 360
Query: 426 QLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLLAET 464
+LG + D +P LV + F R I G+ + ++E
Sbjct: 361 RLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEV 402
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 56/307 (18%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
R E GD +P L+ I A G HTL L++ G V+ +G GQLG
Sbjct: 176 RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 235
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
LG++ VP+P + +G+ + ++ACG S ++
Sbjct: 236 LGNQTDAVPSP---------------------AQIMYNGQP----ITKMACGAEFSMIMD 270
Query: 306 DAGALLTFGWGLYGQCGHGSTNDQL----RPSYASSLM--------------------DI 341
G L +FG YGQ GH S + R Y L+ ++
Sbjct: 271 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 330
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
V +A G HT+ + + RV+ +G +G+LG + E VP+L++ + A +
Sbjct: 331 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIY 390
Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLL 460
G S ++E G + WG + P V + G+ R++ACG ++
Sbjct: 391 AGYTCSFAVSEVGGLFFWGATNTSREST------MYPKAVQDLCGWRIRSLACGKSSIIV 444
Query: 461 LAETTQI 467
A+ + I
Sbjct: 445 AADESTI 451
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 162/419 (38%), Gaps = 76/419 (18%)
Query: 53 KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ V G C +L + GKL +WG +++GQ K E P + +V AA
Sbjct: 151 RTVVSGSCAAHSLLITTEGKLWSWGR-NEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAAC 209
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H +++TE G V+ FG Q + A+P+ P
Sbjct: 210 GRNHTLALTETGSVFA---------------FGENKMGQLGLGNQTDAVPS---PAQIMY 251
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
G+ + K A G EF ++I+ G
Sbjct: 252 NGQPITKM-------------ACGAEF-------------------------SMIMDCKG 273
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
++ +G GQLG S K + I + + + + + V
Sbjct: 274 NLYSFGCPEYGQLGHNSDGKFIARAQRIE-YDCELVPRRVAIFIEKTKDGQILPVPNVVV 332
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAA 348
+++ACG H+ V+ + ++G+G YG+ GH D++ P L D QI A
Sbjct: 333 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGASQIYA 391
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G + +S G ++ +G + ++ PK ++ L R + ++CG + S
Sbjct: 392 GYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQD--LCGWRIRSLACG-KSSI 442
Query: 409 VLTEDGQVLSWGWN-KYGQLGLGDSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLAE 463
++ D +SWG + +G+LG GD ++ + + + G +A G+ H+L++A
Sbjct: 443 IVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIAR 501
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
SC A HS ++T +G++ SWG N+ GQLG GD+ P L+ + + + ACG HTL
Sbjct: 157 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 215
Query: 460 LLAETTQI 467
L ET +
Sbjct: 216 ALTETGSV 223
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 31/215 (14%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
PG + +A G H L+LS GQ+ WG GQ G+G ++ H G
Sbjct: 774 PGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANL--------HQVDG- 824
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-- 327
D P +++IACG HSA + G+L TFGWG++GQ GHG N
Sbjct: 825 DWP-----------------AIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNS 867
Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
+QL P+ + L+ +V QIA G HTV ++ GRV V G +GQ+G D + V
Sbjct: 868 NQLVPTRVNGLI-CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVD-DDIKKVFAFT 925
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
P L R + ++ HS +TED +V WG N
Sbjct: 926 PLP-LGPLRVRDIATHYYHSICITEDNRVFEWGRN 959
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 17/184 (9%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-----VEQI 346
+ IACG H V++ +G L +G +GQCG G + ++L + +E+I
Sbjct: 779 RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHS------FRIANLHQVDGDWPAIEKI 832
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVSCGA 404
A G +H+ I +G ++ FG +GQLG G N VP + I + + ++CG
Sbjct: 833 ACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQ---IACGR 889
Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLAE 463
H+ VLT+ G+VL G YGQ+G+ D I + + +P+ R+IA ++H++ + E
Sbjct: 890 AHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITE 949
Query: 464 TTQI 467
++
Sbjct: 950 DNRV 953
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 98/259 (37%), Gaps = 73/259 (28%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+T++A G HT++L+D G+V G G GQ+G+ IK V +P
Sbjct: 881 KVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPL----------- 929
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ------------ 320
G V++IA HS +T+ + F WG Q
Sbjct: 930 --------------GPLRVRDIATHYYHSICITEDNRV--FEWGRNPQELKMRMFVMKKI 973
Query: 321 --CGHGSTNDQLRPSYASS--------------------------LMDIQVEQIAAGLWH 352
+T D PS +++ +D + +A GL H
Sbjct: 974 RSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSH 1033
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK--VVSCGARHSAVL 410
+ I+ EG +Y +G QLG G P + E AK VS G H+
Sbjct: 1034 SALITSEGTLYTWGKGLDYQLGHGNKNERMEPH----QVFEPNGAKWVNVSLGNNHTIAS 1089
Query: 411 TEDGQVLSWGWNKYGQLGL 429
T+DG V +WG N +GQ G+
Sbjct: 1090 TDDGSVFAWGKNDFGQCGV 1108
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
+++P++LE P R + ++CGA H VL+ GQ+ +WG N++GQ G+G S I +L
Sbjct: 765 QHLPRVLEYP---GGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSF--RIANL 819
Query: 441 VPIHGFLP--RNIACGWWHTLLL 461
+ G P IACG +H+ +
Sbjct: 820 HQVDGDWPAIEKIACGQFHSAFI 842
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 51/267 (19%)
Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
GV++ VA+G H+L+++ G++W WG +GQLG G IK + P LI L+
Sbjct: 138 GVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGD-IKRIDVPKLIESLK----- 191
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
G +V ACG H+ +T+ G++ FG GQ G G+ D
Sbjct: 192 ------------------GEVFV-HAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTD 232
Query: 329 QLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--------- 378
+ PS A L + Q + ++A G ++ + +G +Y FG ++GQLG D
Sbjct: 233 AV-PSPAQILYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQR 291
Query: 379 ---QAENVPKLLETPILESKRAKV----------VSCGARHSAVLTEDGQVLSWGWNKYG 425
E + + + I ++K ++ ++CG HS +L +V SWG+ YG
Sbjct: 292 IEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYG 351
Query: 426 QLGLGDSIDRNIPSLVPIHGFLPRNIA 452
+LG + D +P LV + F R A
Sbjct: 352 RLGHSEQRDEMVPRLVKLFDFPGRGAA 378
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 120/291 (41%), Gaps = 58/291 (19%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G A G HTL L++ G V+ +G GQLGLG++ VP+P I
Sbjct: 184 PKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI--- 240
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
+ G + ++ACG S ++ G L +FG YGQ G
Sbjct: 241 ------------LYNGQP----------ITKVACGAEFSMIMDCKGNLYSFGCPEYGQLG 278
Query: 323 HGSTNDQL----RPSYASSLM--------------------DIQVEQIAAGLWHTVCISV 358
H S + R Y L+ ++ V IA G+ H++ +
Sbjct: 279 HNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDS 338
Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
+ RV+ +G +G+LG + E VP+L++ + A + GA S ++E G +
Sbjct: 339 QKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFF 398
Query: 419 WGWNKYGQLGLGDSIDRNI--PSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
WG S D + ++ + G+ R++ACG ++ A+ + I
Sbjct: 399 WG-------ATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIVAADESTI 442
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 142/418 (33%), Gaps = 123/418 (29%)
Query: 53 KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ V G C +L + GKL +WG +D+GQ K + P+ V AA
Sbjct: 142 RSVASGSCAAHSLLITVEGKLWSWGR-NDKGQLGHGDIKRIDVPKLIESLKGEVFVHAAC 200
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H +++TE G VY FG Q K A+P
Sbjct: 201 GRNHTLALTENGSVYA---------------FGENKMGQLGLGNKTDAVP---------- 235
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
SP + N G ITKVA G ++I+ G
Sbjct: 236 ------------------------------SPAQILYN-GQPITKVACGAEFSMIMDCKG 264
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN-SSGKAGR-- 288
++ +G GQLG S K + I D L+ R+ ++ K G+
Sbjct: 265 NLYSFGCPEYGQLGHNSDGKYIARAQRIEY--------DCELIARRIAIFIEKTKDGQIL 316
Query: 289 ----SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-- 342
V++IACG HS ++ + ++G+G YG+ GH D++ P L D
Sbjct: 317 PVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVK-LFDFPGR 375
Query: 343 -VEQIAAGLWHTVCISVEGRVYVFGGNQ-------------------------------- 369
QI AG + +S G ++ +G
Sbjct: 376 GAAQIYAGATCSFAVSEMGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIV 435
Query: 370 --------------FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
FG+LG G ++A++ E L+ + V G H+ V+ D
Sbjct: 436 AADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTLVVARD 493
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 43/213 (20%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+++ G H+ ++ AG + ++G G +GQ GHG+ +L P +L + + ++AAG
Sbjct: 160 ARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 351 WHTVCISVEGRVYVFGGNQFGQL------------------------GTGVDQ------- 379
WH+VC+S G +Y++G N+ GQL G+ V +
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDG 279
Query: 380 -------AENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
+ P LL+ P+ A SCG+RH+AV+T G++ +WGW KYGQLG D+
Sbjct: 280 APAPFIAVQPFPALLDLPM--GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDT 337
Query: 433 IDRNIPSLVPIH---GFLPRNIACGWWHTLLLA 462
+ P V + + CG W+T + A
Sbjct: 338 TSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYA 370
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAVV 304
E +D + R G A G VK +CG RH+AVV
Sbjct: 257 AREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSRHTAVV 315
Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD--IQVEQIAAGLWHTVCISVE 359
T G L T+GWG YGQ GH T RP +D +QV+ + G W+T +VE
Sbjct: 316 TRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 372
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
P Y +++ Q+ G H + + G+V+ +GG + GQLG G +AE P+LLE
Sbjct: 149 PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA-- 206
Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
L+ V+ G HS ++E G + WGWN+ GQL L
Sbjct: 207 LQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 244
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVTRTGELYT 323
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 324 WGWGKYGQLG 333
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 63/240 (26%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 148 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 206
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
L QG V + E+A GG HS V++ G + +GW GQ
Sbjct: 207 L--------------QGLV----------MAEVAAGGWHSVCVSETGDIYIWGWNESGQL 242
Query: 322 GHGSTN-------------------DQLR-------------------PSYASSLMDIQV 343
+ N Q++ P+ M
Sbjct: 243 ALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDA 302
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
+ + G HT ++ G +Y +G ++GQLG + + P+ +E + + + K V+CG
Sbjct: 303 VKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 362
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLP 448
P+ RA+ + GA H+ +L GQV SWG ++GQLG G P L+ + G +
Sbjct: 153 PLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVM 212
Query: 449 RNIACGWWHTLLLAETTQI 467
+A G WH++ ++ET I
Sbjct: 213 AEVAAGGWHSVCVSETGDI 231
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 77/288 (26%)
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H++ L++ G+V+ WG G G+LG G+ + + R + QG
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDR---------------QRRPRQIEALQGE--- 4134
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
V +++CG +HSAVVT G L TFG G YG+ G G+T+++ P ++L Q
Sbjct: 4135 -------EVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQ 4187
Query: 343 VEQIAAGLWHTVCISVEG-RVYVFGGNQFGQLGTGVDQAENVPKLLET------------ 389
+ Q+A GL HT+ +S +G V+ FG +G+LG G A++ P+ ++
Sbjct: 4188 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACG 4247
Query: 390 --------------------------------------PILESKRAKVVSCGARHSAVLT 411
P+L + V+ GA H+ L
Sbjct: 4248 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA 4307
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
+G V +WG N GQLGLG + P+LV + G R I+ G H+
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4355
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 36/243 (14%)
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
I+S+ +V+ WG QL G++ K++ P L P A +
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKIL-QPKLAPSFSDAQT------------------ 407
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-----LRPSYASSLMD 340
I G + V++ G++ G G YG+ G G +N+Q L S+
Sbjct: 408 --------IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKK 459
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
+ + + G HT+ + EG V+ +G +G+LG G + PKL++ P L+ K V
Sbjct: 460 VSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCV 516
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
S G RHSA +TEDG++ +WG +G+LG GDS RNIP+LV + ++CG HT+
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIA 575
Query: 461 LAE 463
L++
Sbjct: 576 LSK 578
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 34/231 (14%)
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
V+ WG G GQL R MVP + S +
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP----------------------------AAAPSFSQAQ 4030
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL-- 350
++ CG + V+ G +L G G YG+ G G+++D + S+L V Q+
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 351 -WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H++ ++ G V+ +G +G+LG G + P+ +E L+ + +SCG +HSAV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFKHSAV 4148
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
+T DG++ ++G YG+LGLG++ ++ +P V + G+ +ACG HTL
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 26/250 (10%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
+V G T ++ G V G G G+LG G+ + H++ + A G V
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL----HVLTVIS-ALQG-----FV 4080
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
V S G G HS +T++G + ++G G YG+ GHG+++ Q RP
Sbjct: 4081 VTQLVTSCGSDG------------HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI 4128
Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
+L +V Q++ G H+ ++ +G+++ FG +G+LG G + +P+ LE
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE--RVTALEGY 4186
Query: 396 RAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIAC 453
+ V+CG H+ ++ DG ++ ++G YG+LGLG+S ++ P + + G + +AC
Sbjct: 4187 QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4246
Query: 454 GWWHTLLLAE 463
G ++ L +
Sbjct: 4247 GTQFSVALTK 4256
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 32/219 (14%)
Query: 206 VTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+T P I KV++ HTL + G+V+ WG G G+LG G+
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGN-------------- 494
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
+S + P L+ QG + GK V ++ G RHSA VT+ G L T+G G +G+ G
Sbjct: 495 ---SSTQKYPKLI-QGPLQ--GKV----VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAE 381
HG +N + P+ + + V +++ G HT+ +S +GR V+ FGG G+LG G
Sbjct: 545 HGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
PK++E L+ + V G++ S LT GQV +WG
Sbjct: 603 YKPKVIEA--LQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G + V+AG RH+ +++ G+++ WG G G+LG G ++ ++
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD-----------------SNSRN 552
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
P LV+ S V E++CG H+ A+ D + +FG G G+ GHG TN
Sbjct: 553 IPTLVKD----------ISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLE 388
+P +L + + ++ AG ++ ++ G+VY +G LG G +A + PKL+E
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE 660
Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
L + R VS G H L+ D +V +WG N GQ G G+S
Sbjct: 661 E--LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 154/397 (38%), Gaps = 75/397 (18%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
F + +V + H +++TE+GEV++WG D+G G D
Sbjct: 4079 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVP 254
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN------ 4223
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
++ K P ++ G +K++ACG + S +T G + TFG
Sbjct: 4224 -----------STAKSSP-----QKIDVLCGIG---IKKVACGTQFSVALTKDGHVYTFG 4264
Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
G + RP L + +E +A G HT+ ++ G VY +G N GQLG
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLG 4324
Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
G P L+ L+ K + +S G HSA T
Sbjct: 4325 LGHTNHVREPTLVTG--LQGKNVRQISAGRCHSAAWT 4359
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 125/314 (39%), Gaps = 64/314 (20%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
+ +L L+ GQV+ WG G LG GS P LI E A+ +
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI---EELAATR------------ 666
Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMD 340
+ +++ G H ++ + +G GQCG G ST +P S L
Sbjct: 667 ---------IVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDG 717
Query: 341 IQVEQIAAGLWHTV 354
I ++QI+AG H++
Sbjct: 718 IAIQQISAGTSHSL 731
Score = 39.7 bits (91), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
VY++G + GQL + NV P +A+ V CG + V+ +G VL+ G
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGE 4053
Query: 422 NKYGQLGLGDSIDRNIPSLV-PIHGFLPRNI--ACGW-WHTLLLAETTQI 467
YG+LG G+S D ++ +++ + GF+ + +CG H++ L E+ ++
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4103
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4228 SSPQKIDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4275
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A V+ A G H +++ G+VY WG
Sbjct: 4276 ARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWG 4316
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 139/295 (47%), Gaps = 45/295 (15%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPT 255
C+ L P K+ A G HTL+ +D G V+ G EGQLGLG +I
Sbjct: 80 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
I L +A L G + NS G+ G I+
Sbjct: 139 ADTIKQL--SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWIS 196
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS--SLMDI--QVEQIAAGLW 351
CG HSA VT G L TFG G+ G ++L ++ S ++ I +V Q+A G
Sbjct: 197 CGYYHSAFVTMDGELYTFGEPENGKLG---LPNELLMNHRSPQRVLGIPERVIQVACGGG 253
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVL 410
HTV ++ E VY FG QFGQLG G E + PK++E ++ ++ +SCG H+A++
Sbjct: 254 HTVVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIER--IKDQKICHISCGENHTALM 310
Query: 411 TEDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
TE G + ++G ++G+LGLG + ++ P+L F + IACG H L+ A
Sbjct: 311 TELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFA 365
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 90/171 (52%), Gaps = 6/171 (3%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
++CG H+A+VT L FG +GQ G GS ++P+ +L +V+ A G HT
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 354 VCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKL-LETPILESKRAKVVSCGARHSAVLT 411
+ + G VY GGN GQLG G D + ++ TP + K +S GA SA LT
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP---ADTIKQLSAGANTSAALT 156
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLA 462
EDG++ WG N GQ+GL D + IP V + G I+CG++H+ +
Sbjct: 157 EDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVT 206
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 38/253 (15%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PTPHLIPCLEHAASGKDRPLLV 275
++ G HT I++ +++ +G GQLGLGS+ ++ PT C++ K
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPT-----CIKALKPEK------ 88
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA 335
VK ACG H+ V TD G + G GQ G G T+D R ++
Sbjct: 89 ---------------VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDD--RDTFH 131
Query: 336 SSLMDI---QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
+ ++Q++AG + ++ +G+++++G N GQ+ G++ NV E +
Sbjct: 132 QIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQI--GLEDKSNVCIPHEVTV- 188
Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--N 450
K +SCG HSA +T DG++ ++G + G+LGL + + N S + G R
Sbjct: 189 -GKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ 247
Query: 451 IACGWWHTLLLAE 463
+ACG HT++L E
Sbjct: 248 VACGGGHTVVLTE 260
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
F T P ++ KI ++ G HT +++++G ++ +G G G+LGLG
Sbjct: 281 FETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLG 330
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
D+ K + G A A +E GKL WG + EGQ L E +P E +V K
Sbjct: 139 ADTIKQLSAGANTSA-ALTEDGKLFMWGD-NSEGQIGL------EDKSNVCIPHEVTVGK 190
Query: 109 ----AAAGWAHCVSVTEAGEVYTWGWRE 132
+ G+ H VT GE+YT+G E
Sbjct: 191 PISWISCGYYHSAFVTMDGELYTFGEPE 218
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 26/256 (10%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+ + V+ G H++ + G+V+ WG G EGQLG+G ++ P I L
Sbjct: 74 LHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--------- 124
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQL 330
AG + +++CG HS +++ G + ++G GQ G G ++ Q
Sbjct: 125 --------------AGIKII-QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQA 169
Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLET 389
P SL I + Q+AAG H+ +S+ G + +G N+ GQL +G E + K
Sbjct: 170 IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI 229
Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
L++ +SCG H+AVLTE+GQV ++G N GQL + P L+ G
Sbjct: 230 GALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVS 289
Query: 450 NIACGWWHTLLLAETT 465
I C +HT+ TT
Sbjct: 290 QIECASYHTIAYVYTT 305
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 33/263 (12%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+++ + A+G H+L+L +V+ G GQLG R + P I L
Sbjct: 21 GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLG-QRRDQSTERPEPIQALNDL----- 74
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-Q 329
+V ++CG HS V G + +G G GQ G G +
Sbjct: 75 -------------------HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEIS 115
Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLE 388
P+ +L I++ Q++ G +H++ +S +G V+ +G N GQLG G + +++ +P+ ++
Sbjct: 116 FMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK 175
Query: 389 TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRNI---PSLVPIH 444
+ LE V+ G HS L+ G WG N+ GQL L G+ + I S+ +
Sbjct: 176 S--LEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALK 233
Query: 445 GFLPRNIACGWWHTLLLAETTQI 467
I+CG+ HT +L E Q+
Sbjct: 234 NLSVIYISCGYEHTAVLTEEGQV 256
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 101/227 (44%), Gaps = 35/227 (15%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ P + G+KI +V+ G H+L LS+ G V+ WG EGQLGLG + P +
Sbjct: 115 SFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKV 174
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--L 317
LE PL ++A GG HS ++ G +FGWG
Sbjct: 175 KSLEGI------PL------------------AQVAAGGTHSFALSLTGT--SFGWGSNR 208
Query: 318 YGQC---GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
GQ G+ +P +L ++ V I+ G HT ++ EG+V+ FGGN GQL
Sbjct: 209 SGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQ 268
Query: 375 TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWG 420
+ P+L+E R + C + H+ A + GQV+S G
Sbjct: 269 PSPRSGQRGPQLIEGI---GGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAAAGW 113
GG FAL S +G WGS + GQ L+ K E P SV+ + G+
Sbjct: 188 GGTHSFAL--SLTGTSFGWGS-NRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGY 244
Query: 114 AHCVSVTEAGEVYTWG 129
H +TE G+V+T+G
Sbjct: 245 EHTAVLTEEGQVFTFG 260
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 178/413 (43%), Gaps = 42/413 (10%)
Query: 66 TSESGKLITWGSAD----DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+E G ++T G D G+S L E +P +P VV+A AG H V +++
Sbjct: 31 NTEPGLVLTLGQGDVGQLGLGESVL------ERKKPALVPLLQDVVQAEAGGMHTVCLSQ 84
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS-FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+G+VY++G C + RD GS Q + A S A E +
Sbjct: 85 SGQVYSFG---CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVF 141
Query: 181 KTSSAREESENPASGDEFF-TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
S R+ + + ++ P V L+ + KVA+G H ++L++ G ++ G G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQLD--APVVKVASGNDHLVMLTNDGDLYTLGCG 199
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
+GQLG P L G R L+ R + S G GR ++ CG
Sbjct: 200 EQGQLG--------RVPELFAN-RGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAY 250
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI--AAGLWHTVCIS 357
+ ++ G + FG Y Q G T P +S + + + G HTVC+
Sbjct: 251 FTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMD 310
Query: 358 VEGRVYVFGGNQFGQLGTGVDQAE-NVPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQ 415
EG+ Y G ++G+LG G E ++P L+ P++ S V+CGA +++DG+
Sbjct: 311 SEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSS-----VACGASVGYAVSKDGR 365
Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----IACGWWHTLLLAE 463
V +WG QLG G D + S V + G N ++ G HT+LL +
Sbjct: 366 VFAWGMGTNYQLGTGQ--DEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVK 416
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 91/170 (53%), Gaps = 17/170 (10%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G S ++ +P+ L D V Q AG HTVC+S
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQ 84
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP +E L+ K + VS G H+A LTEDG+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQ-VSAGDSHTAALTEDGRV 140
Query: 417 LSWG--WNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLL 461
WG + G +GL + + + S+VP+ L +A G H ++L
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKK---SMVPVQVQLDAPVVKVASGNDHLVML 187
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 135/355 (38%), Gaps = 76/355 (21%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + +A VVK A+G H V +T G+
Sbjct: 133 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGD 192
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT G E +V F + G G+Q G +V R
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRG-------GRQG-------------LGRLLVPR----- 227
Query: 185 AREESENPASGDEFFTLSPCLVTLNPG----VKITKVAAGGRHTLILSDMGQVWGWGYGG 240
C++ + G V+ G T +S G V+G+G
Sbjct: 228 -------------------CVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSN 268
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLG TP C + Q ++ S + +S+V GG+H
Sbjct: 269 YHQLG---------TPGTGSC------------FIPQ-NLTSFKNSTKSWVG--FSGGQH 304
Query: 301 SAVVTDA-GALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
V D+ G + G YG+ G G ++ P+ S L V +A G +S
Sbjct: 305 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSK 362
Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+GRV+ +G QLGTG D+ P + LE++ VS G +H+ +L +D
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 99/176 (56%), Gaps = 4/176 (2%)
Query: 291 VKEIACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAA 348
+K ++ G G H + T+ G + +G Y Q G+G+TN + P ++L+ QV ++A
Sbjct: 76 IKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVAC 135
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G H++ ++ +G ++ +G N GQ+G+G + P+ + T L +KR ++CG S
Sbjct: 136 GSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHTKRVVNIACGQTSSM 194
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
+ + G+V WG+N GQLGLG++ ++ P V +HG I CG+ HTL L +
Sbjct: 195 AVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD 250
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P V N +K + +VA G H++ L+ G+++ WGY GQ+G GS PTP +
Sbjct: 116 IAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ-PTPRKV 174
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H V IACG S V D+G + +G+ G
Sbjct: 175 TNCLHTKR-----------------------VVNIACGQTSSMAVLDSGEVYGWGYNGNG 211
Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
Q G G+ +QL P ++L + V QI G HT+ ++ EG +Y +G N +GQLGTG
Sbjct: 212 QLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG--S 269
Query: 380 AENVPKLLETPILESKRAKVVSCGARH-SAVLTEDGQVLSWG 420
N+ + + + + ++ +C + H SA T+ G V WG
Sbjct: 270 KNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 115/252 (45%), Gaps = 28/252 (11%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD TL P + G KI ++ G G H L+ ++ G V+ WG+ G QLG G+ +
Sbjct: 56 TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+ + LL++Q V E+ACG HS + G L
Sbjct: 116 IAPVQVCT-----------NLLIKQ-------------VIEVACGSHHSMALAADGELFA 151
Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
+G+ GQ G GST +Q P ++ + + V IA G ++ + G VY +G N G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNG 211
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
QLG G + + P + L + CG H+ LT++G + +WG N YGQLG G
Sbjct: 212 QLGLGNNGNQLTP--VRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269
Query: 432 SIDRNIPSLVPI 443
+ P+ + +
Sbjct: 270 KNNLLSPTQIMV 281
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 141/368 (38%), Gaps = 90/368 (24%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE---ASVVKAAAGWAHCVSV 119
L T+E G + WG G S L +G + P + T V++ A G H +++
Sbjct: 87 VLLTTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GE++ WG+ C G GS ST Q P+ ++
Sbjct: 144 AADGELFAWGYNNC----------GQVGS---GSTANQ---------PTPRK-------- 173
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
++ CL T ++ +A G ++ + D G+V+GWGY
Sbjct: 174 ---------------------VTNCLHT----KRVVNIACGQTSSMAVLDSGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++ V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHGMC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
H+ +TD G L +G YGQ G GS N+ L P+ + +E A HT +
Sbjct: 244 HTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQ 303
Query: 360 -GRVYVFG 366
G VY++G
Sbjct: 304 GGHVYMWG 311
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVCISVEGRV 362
VTD + FG G G L P +L +++ ++ G H + + +G V
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVV 96
Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
Y +G N + QLG G P + T +L K+ V+CG+ HS L DG++ +WG+N
Sbjct: 97 YAWGHNGYSQLGNGTTNQGIAPVQVCTNLL-IKQVIEVACGSHHSMALAADGELFAWGYN 155
Query: 423 KYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
GQ+G G + ++ P V +H NIACG ++ + ++ ++
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEV 202
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA-RHSAVLTE 412
+ ++ V+VFG N LGTG +Q+ VPK LE L K+ K +S G+ H + TE
Sbjct: 35 IYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA--LCGKKIKSLSYGSGPHVLLTTE 92
Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLA 462
DG V +WG N Y QLG G + P V + + + +ACG H++ LA
Sbjct: 93 DGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALA 144
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P V N +K + +VA G H++ L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 116 IAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ-PTPRKV 174
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H V IACG S V D G + +G+ G
Sbjct: 175 TNCLHIKR-----------------------VVGIACGQTSSMAVLDNGEVYGWGYNGNG 211
Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ 379
Q G G+ +QL P ++L + V QI G HT+ ++ EG +Y +G N +GQLGTG
Sbjct: 212 QLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG--- 268
Query: 380 AENVPKLLETPILESKRAKVVSCGARH----SAVLTEDGQVLSWG 420
N LL + ++ +VV A H SA T+ G V WG
Sbjct: 269 --NKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 98/176 (55%), Gaps = 4/176 (2%)
Query: 291 VKEIACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAA 348
+K ++ G G H + T+ G + +G Y Q G+G+TN + P ++L+ QV ++A
Sbjct: 76 IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVAC 135
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G H++ ++ +G V+ +G N GQ+G+G + P+ + T L KR ++CG S
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHIKRVVGIACGQTSSM 194
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAE 463
+ ++G+V WG+N GQLGLG++ ++ P V +H I CG+ HTL L +
Sbjct: 195 AVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 28/252 (11%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD TL P + G KI ++ G G H L+ ++ G V+ WG+ G QLG G+ +
Sbjct: 56 TGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+ + LL++Q V E+ACG HS + G +
Sbjct: 116 IAPVQVCT-----------NLLIKQ-------------VVEVACGSHHSMALAADGEVFA 151
Query: 313 FGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
+G+ GQ G GST +Q P ++ + I+ V IA G ++ + G VY +G N G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
QLG G + + P + L S + CG H+ LT++G + +WG N YGQLG G+
Sbjct: 212 QLGLGNNGNQLTP--VRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269
Query: 432 SIDRNIPSLVPI 443
+ P+ + +
Sbjct: 270 KNNLLSPAHIMV 281
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 138/368 (37%), Gaps = 90/368 (24%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE---ASVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
H+ +TD G L +G YGQ G G+ N+ L P++ + VE A HT +
Sbjct: 244 HTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQ 303
Query: 360 -GRVYVFG 366
G VY++G
Sbjct: 304 GGHVYMWG 311
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE-GRV 362
VTD + FG G G L P L +++ ++ G V +S E G V
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVV 96
Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
Y +G N + QLG G P + T +L K+ V+CG+ HS L DG+V +WG+N
Sbjct: 97 YAWGHNGYSQLGNGTTNQGIAPVQVCTNLL-IKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 423 KYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACG 454
GQ+G G + ++ P V +H IACG
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 95.5 bits (236), Expect = 7e-19, Method: Composition-based stats.
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 32/282 (11%)
Query: 202 SPCLVTL---NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPTP 256
SP LV P +++ +A GG+H+L L+ G+V+ WG QLGLG+ P
Sbjct: 230 SPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLP 289
Query: 257 HLI----------------PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
LI + + D S NSS + + +++CG
Sbjct: 290 QLINFNISYNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNR 349
Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTN--DQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
SAV+TD G L TFG G +G+ G G + Q P SL + +++G H++ ++
Sbjct: 350 SAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTN 409
Query: 359 EGRVYVFGGNQFGQLGTGV-DQAENVPKLLETPILESKRAKV------VSCGARHSAVLT 411
+G V+ FG N GQLG G + +PK ++ ++ + VS G HS ++
Sbjct: 410 KGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAIS 469
Query: 412 EDGQVLSWGWNKYGQLGLGDSI--DRNIPSLVPIHGFLPRNI 451
++ +WG + YG LG + DRN+P L+ + + N+
Sbjct: 470 DNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNV 511
Score = 89.4 bits (220), Expect = 6e-17, Method: Composition-based stats.
Identities = 66/241 (27%), Positives = 118/241 (48%), Gaps = 38/241 (15%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKD 270
+KI K++ G + +++D G ++ +G G G+LGLG + + M TP L+ L
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSL-------- 389
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQ 329
QG ++ +++ GG HS V+T+ G + +FG GQ G G +N Q
Sbjct: 390 ------QG----------HFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQ 433
Query: 330 LRPS--------YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QA 380
P I + +++AG +H++ IS Y +G + +G LGT +D Q
Sbjct: 434 TIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQG 493
Query: 381 E-NVPKLLETP--ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
+ N+P L+ + ++++ + VS G +H+ ++ DG + SWG N +LG ++
Sbjct: 494 DRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLT 553
Query: 438 P 438
P
Sbjct: 554 P 554
Score = 76.3 bits (186), Expect = 5e-13, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 47/215 (21%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP---SYASSLMDIQVEQIAAGL 350
I+ G HS+ +TD G L TFG GL G+ GHG+ P + + ++V IA G
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGG 252
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTG---VDQAENVPKLLETPI---------------- 391
H++ +++ G+VY +GGN QLG G ++P+L+ I
Sbjct: 253 KHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNSTNN 312
Query: 392 --------------------LESKRAKVV--SCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
+ + K+V SCG SAV+T+ G + ++G +G+LGL
Sbjct: 313 NNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGL 372
Query: 430 GDS--IDRNIPSLV-PIHGFLPRNIACGWWHTLLL 461
G+ + ++ P LV + G +++ G H+L+L
Sbjct: 373 GEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVL 407
Score = 61.2 bits (147), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV G I +++GG H+L+L++ G V+ +G +GQLG+G P I
Sbjct: 382 TPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQW 441
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YG 319
+ + + +P+ + +++ GG HS ++D T+ WG YG
Sbjct: 442 FQTSQQQQQQPI----------------NIIKVSAGGYHSIAISDNND--TYAWGRSDYG 483
Query: 320 QCG-----HGSTNDQLRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
G G N + + S ++D ++ +++G H V +S++G +Y +G N +L
Sbjct: 484 VLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRL 543
Query: 374 GTGVDQAENVPKLLETPILESKRAK--VVSCG 403
G D+ + PK + SK +K + +CG
Sbjct: 544 GFKSDENQLTPK---KCFINSKDSKPLLFTCG 572
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 73/265 (27%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KI ++ G H+ ++D G ++ +G G G+LG G+ ++ +P L+ + S +
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGN-LESYSSPKLVEFFQTKPSLR--- 244
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND---- 328
V IA GG+HS +T G + + WG C G N
Sbjct: 245 ------------------VVSIANGGKHSLALTICGKV--YSWGGNDSCQLGLGNGSSSS 284
Query: 329 --------QLRPSY---------------------------------ASSLMDIQVEQIA 347
SY +S+ I++ +++
Sbjct: 285 YYSLPQLINFNISYNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLS 344
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ--AENVPKLLETPILESKRAKVVSCGAR 405
G + I+ +G ++ FG G+LG G ++ PKL+++ L+ +S G
Sbjct: 345 CGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQS--LQGHFIIDMSSGGG 402
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLG 430
HS VLT G V S+G N GQLG+G
Sbjct: 403 HSLVLTNKGLVFSFGRNDQGQLGIG 427
Score = 33.1 bits (74), Expect = 5.0, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACG 454
++S GA HS+ +T+ G + ++G G+LG G+ + P LV P +IA G
Sbjct: 192 LISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANG 251
Query: 455 WWHTLLL 461
H+L L
Sbjct: 252 GKHSLAL 258
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 179/415 (43%), Gaps = 42/415 (10%)
Query: 67 SESGKLITWGSAD----DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+E G ++T G D G+S L E +P +P VV+A AG H V + ++
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVL------ERKKPALVPLLQDVVQAEAGGMHTVCLNQS 85
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGS-FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G+VY++G C + RD GS Q + A S A E +
Sbjct: 86 GQVYSFG---CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFL 142
Query: 182 TSSAREESENPASGDEFF-TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
S R+ + + ++ P V L+ + + KVA+G H ++L+ G ++ G G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQLD--MPVVKVASGNDHLVMLTTDGDLYTLGCGE 200
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
+GQLG P L G +R L+ + + S G GR ++ CG
Sbjct: 201 QGQLG--------RVPELFAN-RGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYL 251
Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI--AAGLWHTVCISV 358
+ ++ G + FG Y Q G T P +S + + + G HT+C+
Sbjct: 252 TFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDS 311
Query: 359 EGRVYVFGGNQFGQLGTGVDQAE-NVPKLL-ETPILESKRAKVVSCGARHSAVLTEDGQV 416
EG+ Y G ++G+LG G E ++P L+ P++ S V+CGA +++DG+V
Sbjct: 312 EGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSS-----VACGASVGYAVSKDGRV 366
Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----IACGWWHTLLLAETTQ 466
+WG QLG G D + S V + G N ++ G HT+LL + +
Sbjct: 367 FAWGMGTNYQLGTGQ--DEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDKE 419
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 17/170 (10%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G S ++ +P+ L D V Q AG HTVC++
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTVCLNQ 84
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP +E L+ K + VS G H+A LTEDG+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQ-VSAGDSHTAALTEDGRV 140
Query: 417 LSWG--WNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLL 461
WG + G +GL + + + S+VP+ L +A G H ++L
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKK---SMVPVQVQLDMPVVKVASGNDHLVML 187
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 131/355 (36%), Gaps = 76/355 (21%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + + VVK A+G H V +T G+
Sbjct: 133 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGD 192
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT G E +V F + G Q
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQ---------------------------------- 218
Query: 185 AREESENPASGDEFFTLSPCLVTLNPG----VKITKVAAGGRHTLILSDMGQVWGWGYGG 240
G E + C++ + G V+ G T +S G V+G+G
Sbjct: 219 ----------GLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSN 268
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLG TP C + Q ++ S + +S+V GG+H
Sbjct: 269 YHQLG---------TPGTASC------------FIPQ-NLTSFKNSTKSWVG--FSGGQH 304
Query: 301 SAVVTDA-GALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
+ D+ G + G YG+ G G ++ P+ S L V +A G +S
Sbjct: 305 HTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSK 362
Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+GRV+ +G QLGTG D+ P + LE++ VS G +H+ +L +D
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 292 KEIACGGRHSAVVTDAGALLTF-----GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
+++ G H AVVT L T+ G L+GQ GHG +P + L + Q+
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 431
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
+ G TVC++ EG++Y FG + +G +G V + ++ S + VSCG H
Sbjct: 432 SCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNH 491
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
VLT + +V SWG +YG+LGL D P V + + + CG T LL ++
Sbjct: 492 VVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSG 551
Query: 466 QI 467
++
Sbjct: 552 KV 553
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 176/468 (37%), Gaps = 117/468 (25%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW----GS 77
VY+WG T P+K ++ G S + VC G FA+ T E +L TW G
Sbjct: 349 VYVWGGGKST-PQKLDVIK-------SGCSARQVCAGNTHFAVVTVEK-ELYTWVNMQGG 399
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
GQ P+ ++ + + G V VT+ G++Y +G
Sbjct: 400 TKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFG-------- 451
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
+ +G G DK AG EV++ + +
Sbjct: 452 --SDYYGCMGV--------------------DKVAGPEVLEPMQLN-------------- 475
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
FF +P + +V+ G H ++L+ +V+ WG G G+LGL S TP
Sbjct: 476 FFLSNP----------VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYY-TPQ 524
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+ D P + + + CG + ++T +G +L G
Sbjct: 525 KV----------DVPKAL--------------IIVAVQCGCDGTFLLTQSGKVLACGLNE 560
Query: 318 YG-----QCGHGSTNDQLRP--------SYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
+ QC G N + + A L ++ IA G HT I GR+
Sbjct: 561 FNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLT 620
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
FG N+ GQLG G + LL P L K+ VSCG + T+D + +WG
Sbjct: 621 FGCNKCGQLGVGNYKKRLGINLLGGP-LGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGN 679
Query: 425 GQLGL-------GDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAE 463
G+L + G I + P PI G L +++C WHT+L+ E
Sbjct: 680 GRLAMTPTERPHGSDICTSWPR--PIFGSLHHVPDLSCRGWHTILIVE 725
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 123/286 (43%), Gaps = 36/286 (12%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD+ P V G I +V+ G T+ ++D GQ++ +G G +G + V
Sbjct: 409 GDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG----VDKVA 464
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P ++ P+ + N V++++CG H V+T + ++G
Sbjct: 465 GPEVL-----------EPMQLNFFLSNP--------VEQVSCGDNHVVVLTRNKEVYSWG 505
Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
G YG+ G S D P + + + G T ++ G+V G N+F +LG
Sbjct: 506 CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 565
Query: 375 -----TGVDQAE---NVPKLLETPI---LESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
+G+ E VP + L + + ++ G H+A + E G++L++G NK
Sbjct: 566 LNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK 625
Query: 424 YGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
GQLG+G+ R +L+ P+ G ++CG T+ + I
Sbjct: 626 CGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHI 671
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 292 KEIACGGRHSAVVTDAGALLTF-----GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
+++ G H AVVT L T+ G L+GQ GHG +P + L + Q+
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQV 431
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
+ G TVC++ EG++Y FG + +G +G V + ++ S + VSCG H
Sbjct: 432 SCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNH 491
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETT 465
VLT + +V SWG +YG+LGL D P V + + + CG T LL ++
Sbjct: 492 VVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSG 551
Query: 466 QI 467
++
Sbjct: 552 KV 553
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 176/468 (37%), Gaps = 117/468 (25%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW----GS 77
VY+WG T P+K ++ G S + VC G FA+ T E +L TW G
Sbjct: 349 VYVWGGGKST-PQKLDVIK-------SGCSARQVCAGNTHFAVVTVEK-ELYTWVNMQGG 399
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
GQ P+ ++ + + G V VT+ G++Y +G
Sbjct: 400 TKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFG-------- 451
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
+ +G G DK +G EV++ + +
Sbjct: 452 --SDYYGCMGV--------------------DKVSGPEVLEPMQLN-------------- 475
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
FF +P + +V+ G H ++L+ +V+ WG G G+LGL S TP
Sbjct: 476 FFLSNP----------VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYY-TPQ 524
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+ D P + + + CG + ++T +G +L G
Sbjct: 525 RV----------DVPKAL--------------IIVAVQCGCDGTFLLTQSGKVLACGLNE 560
Query: 318 YG-----QCGHGSTNDQLRP--------SYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
+ QC G N + + A L ++ IA G HT I GR+
Sbjct: 561 FNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLT 620
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
FG N+ GQLG G + LL P L K+ VSCG + T+D + +WG
Sbjct: 621 FGCNKCGQLGVGNYKKRLGINLLGGP-LGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGN 679
Query: 425 GQLGL-------GDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAE 463
G+L + G I + P PI G L +++C WHT+L+ E
Sbjct: 680 GRLAMTPTERPHGSDICTSWPR--PIFGSLHHVPDLSCRGWHTILIVE 725
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 123/286 (43%), Gaps = 36/286 (12%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD+ P V G I +V+ G T+ ++D GQ++ +G G +G + V
Sbjct: 409 GDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG----VDKVS 464
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P ++ P+ + N V++++CG H V+T + ++G
Sbjct: 465 GPEVL-----------EPMQLNFFLSNP--------VEQVSCGDNHVVVLTRNKEVYSWG 505
Query: 315 WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
G YG+ G S D P + + + G T ++ G+V G N+F +LG
Sbjct: 506 CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 565
Query: 375 -----TGVDQAE---NVPKLLETPI---LESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
+G+ E VP + L + + ++ G H+A + E G++L++G NK
Sbjct: 566 LNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK 625
Query: 424 YGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
GQLG+G+ R +L+ P+ G ++CG T+ + I
Sbjct: 626 CGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHI 671
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K +ACG +A +TD G ++TFG G G GHGS D +P+ +L+ ++ Q+A G
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGA 452
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + +S E ++ +G G+LG G ++ + P+ + P+ + A+ V CG S +L
Sbjct: 453 SHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQ--QVPMPPGQEAQRVVCGIDSSMIL 510
Query: 411 TEDGQVLSWGWNKYGQLGL 429
T GQ L+ G N++ +LGL
Sbjct: 511 TVPGQALACGSNRFNKLGL 529
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 117/275 (42%), Gaps = 45/275 (16%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P +V G ++ +VA G H L LS +++ WG G G+LGLG+R
Sbjct: 434 PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTR------------- 480
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
E + + P+ Q + + + CG S ++T G L G + + G
Sbjct: 481 ESHSCPQQVPMPPGQEA------------QRVVCGIDSSMILTVPGQALACGSNRFNKLG 528
Query: 323 --HGSTNDQLRPS-----------YASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGN 368
H S ++ P S+ +D + + I G H+ ++ G Y FG N
Sbjct: 529 LDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSN 588
Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
Q GQLGT + P ++ LE + +V+CG + + + +V SWG G+LG
Sbjct: 589 QHGQLGTNTRRGSRAPCKVQG--LEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLG 646
Query: 429 LGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLL 460
D D +P V + H + +++C +TLL
Sbjct: 647 RRDE-DAGLPRPVQLDETHPYTVTSVSCCHGNTLL 680
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS----TNDQLRPSYASSLMD----IQ 342
V ++A G A VT +G L+ + G G GS +Q +P + S ++ +
Sbjct: 334 VVQVAAGRTQKAGVTRSGRLILWEAPPLG-AGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
++ +A G + T C++ G + FG G LG G + P ++E L V+C
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEA--LLGYEMVQVAC 450
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLL 461
GA H L+ + ++ +WG G+LGLG + P VP+ G + + CG +++L
Sbjct: 451 GASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMIL 510
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
+PC V G+K+ VA G T+ + +V+ WG G G+LG +P P
Sbjct: 603 APCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRP 657
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 180/442 (40%), Gaps = 88/442 (19%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
K P L IP + ++ G + S+SG++ ++G +DEG + G
Sbjct: 57 RKKPALVSIPEDVVQAEA-------GGMHTVCLSKSGQVYSFG-CNDEGALGRDTSVEGS 108
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
P + + VV+ +AG +H ++T+ G V+ WG SF +D+
Sbjct: 109 EMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWG------------------SF-RDN 149
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
G L E +K+ ++ P V L+ V
Sbjct: 150 NGVIGLL--------------EPMKK--------------------SMVPVQVQLD--VP 173
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ KVA+G H ++L+ G ++ G G +GQLG P L G +R L
Sbjct: 174 VVKVASGNDHLVMLTADGDLYTLGCGEQGQLG--------RVPELFAN-RGGRQGLERLL 224
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
+ + + S G G ++ CG + ++ G + FG Y Q G T P
Sbjct: 225 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQ 284
Query: 334 YASSLMDIQVEQI--AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLL-ET 389
+S + + + G HTVC+ EG+ Y G ++G+LG G E ++P L+
Sbjct: 285 NLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL 344
Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR 449
P + S V+CGA +T+DG+V +WG QLG G D + S V + G
Sbjct: 345 PAVSS-----VACGASVGYAVTKDGRVFAWGMGTNYQLGTGQ--DEDAWSPVEMMGKQLE 397
Query: 450 N-----IACGWWHTLLLAETTQ 466
N ++ G HT+LL + +
Sbjct: 398 NRVVLSVSSGGQHTVLLVKDKE 419
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 91/170 (53%), Gaps = 17/170 (10%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G + ++ +P+ S D V Q AG HTVC+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPED--VVQAEAGGMHTVCLSK 84
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP +E L+ K + VS G H+A LT+DG+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQ-VSAGDSHTAALTDDGRV 140
Query: 417 LSWG--WNKYGQLGLGDSIDRNIPSLVPIHGFLP---RNIACGWWHTLLL 461
WG + G +GL + + + S+VP+ L +A G H ++L
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKK---SMVPVQVQLDVPVVKVASGNDHLVML 187
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 158/378 (41%), Gaps = 27/378 (7%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E +P + +V+AAAG H V + +G +YT+G C + RD GS +
Sbjct: 62 ERKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTFG---CNDEGALGRDTSEEGSEMQ- 117
Query: 153 STGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNP 210
GK + A Q D R N G E S V +
Sbjct: 118 -PGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQI 176
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
+ K+A+G H ++L+ G ++ G G +GQLG R+ T G +
Sbjct: 177 NTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG---RVPERFTN------RGGRKGLE 227
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
R LLV Q + +GR + +++ CG + V+ G + FG Y Q G +T
Sbjct: 228 R-LLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACY 286
Query: 331 RPSYASSLMDIQVEQI--AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
P +S + I + G HTVC+ EG+ Y G ++G+LG G EN + E
Sbjct: 287 APQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLG----ENAEEQSE 342
Query: 389 -TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
TPI + + V+ GA S ++ DG V +WG QLG G+ D P +
Sbjct: 343 PTPIPDLPKINSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLE 402
Query: 448 PR---NIACGWWHTLLLA 462
R +++ G HT+LL
Sbjct: 403 DREVLSVSSGGQHTVLLV 420
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T G +LT G G GQ G G ++ +P+ + DI Q AAG HTVC+
Sbjct: 33 HPSHGTVGGQVLTLGQGDVGQLGLGEDIMERKKPALVTLTEDIV--QAAAGGMHTVCLGA 90
Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
G +Y FG N G LG D +E ++ + +++ VS G H+A LTEDG+V
Sbjct: 91 SGSIYTFGCNDEGALGR--DTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVFV 148
Query: 419 WG--WNKYGQLGLGDSIDRN-IPSLVPIHGFLPRNIACGWWHTLLL 461
+G + G +GL + + ++ +P V I+ + + IA G H +LL
Sbjct: 149 FGSFRDNNGVIGLLEPMKKSMVPVQVQINTPVIK-IASGNDHLVLL 193
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 6/182 (3%)
Query: 292 KEIACGGRHSAVVTDAGALLTF-----GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
+++ G H AVVT L T+ G L+GQ GHG +P + L V+++
Sbjct: 354 RQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKV 413
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
+ G TVCI+ EG++Y FG + +G LG V + L ++ VSCG H
Sbjct: 414 SCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSH 473
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAETT 465
LT V SWG +YG+LGL D P V + G N+ CG + LL T
Sbjct: 474 IMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTG 533
Query: 466 QI 467
++
Sbjct: 534 KV 535
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 175/467 (37%), Gaps = 107/467 (22%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW-- 75
+ + VY+WG T+P+K + GG + VC G FA+ T E +L TW
Sbjct: 327 RSSEVYVWGG-GKTTPQKLDVFK-------GGWRARQVCAGDAHFAVVTVEK-ELYTWVN 377
Query: 76 --GSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
G + GQ L G +P + SV K + G V +T+ G++Y++G
Sbjct: 378 MQGGSKLHGQ--LGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFG-- 433
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
+ +G G Q AG EV
Sbjct: 434 --------SDYYGCLGVNQS--------------------AGSEV--------------- 450
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
L P LV + +V+ G H + L+ V+ WG G G+LGL S
Sbjct: 451 ---------LEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSE-D 500
Query: 252 MVPTPHLIP-----CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG-GRHSAVVT 305
V +P + C+ + G D L+ +GK +ACG H+ +
Sbjct: 501 DVYSPQKVEVQRGLCIVNVCCGSDGSFLL-----TLTGKV-------LACGLNEHNKL-- 546
Query: 306 DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
L + G+ + A L ++ I+ G HT I GR+ F
Sbjct: 547 ---GLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTF 603
Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
G N+ GQLG G + LL P L K+ VSCG + T D + +WG G
Sbjct: 604 GSNKCGQLGVGDYRKHLGINLLGGP-LGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNG 662
Query: 426 QLGL-------GDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAE 463
+L + G I + P PI G L +++C WHT+L+ E
Sbjct: 663 RLAMTPNERPQGSDICTSWPR--PIFGSLHHVTDLSCRGWHTILIVE 707
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSW-----GWNKYGQLGLGDSIDRNIPSLV-PIHGFLPR 449
RA+ V G H AV+T + ++ +W G +GQLG GD P V + G +
Sbjct: 352 RARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQ 411
Query: 450 NIACGWWHTLLLAETTQI 467
++CG T+ + + Q+
Sbjct: 412 KVSCGSDFTVCITDEGQL 429
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K +ACG +A +TD G ++TFG G G GHG+ D +P+ +L+ ++ Q+A G
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGA 458
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + +S +G ++ +G G+LG G ++ N P+ + P+ + A+ V CG S +L
Sbjct: 459 SHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQ--QVPVAPGQEAQRVVCGIDSSMIL 516
Query: 411 TEDGQVLSWGWNKYGQLGL 429
T G+VL+ G N++ +LGL
Sbjct: 517 TSPGRVLACGSNRFNKLGL 535
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 119/275 (43%), Gaps = 45/275 (16%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P +V G ++ +VA G H L LS G+++ WG G G+LGLG+R H P
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTR-----ESHNCPQQ 494
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
A G++ + + CG S ++T G +L G + + G
Sbjct: 495 VPVAPGQE--------------------AQRVVCGIDSSMILTSPGRVLACGSNRFNKLG 534
Query: 323 --HGSTNDQ------------LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
H S +++ P ++ L + + G H+ I+ G Y FG N
Sbjct: 535 LDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSN 594
Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
Q GQLGT + P ++ LE + +V+CG + + +G+V SWG G+LG
Sbjct: 595 QHGQLGTSSRRVSRAPCRVQG--LEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLG 652
Query: 429 LGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLL 460
D D +P V + H ++ +++C +TLL
Sbjct: 653 RRDE-DAGLPRPVQLDETHPYMVTSVSCCHGNTLL 686
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 331 RPSYASSLMD----IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL 386
+P + S ++ + ++ +A G T C++ G + FG G LG G + P +
Sbjct: 383 QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTI 442
Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-G 445
+E L V+CGA H L+ DG++ +WG G+LGLG N P VP+ G
Sbjct: 443 VEA--LLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPG 500
Query: 446 FLPRNIACGWWHTLLL 461
+ + CG +++L
Sbjct: 501 QEAQRVVCGIDSSMIL 516
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
+PC V G+K+ VA G T+ + G+V+ WG G G+LG +P P
Sbjct: 609 APCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRP 663
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 77/140 (55%), Gaps = 4/140 (2%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K ++CG + +TD G ++TFG G G GHG+ ND +P +L+ ++ Q++ G
Sbjct: 400 IKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGA 459
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI-LESKRAKVVSCGARHSAV 409
H + ++ E V+ +G G+LG + N P+ + P E++R V CG S +
Sbjct: 460 SHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQR---VLCGVDCSMI 516
Query: 410 LTEDGQVLSWGWNKYGQLGL 429
++ Q+L+ G N++ +LGL
Sbjct: 517 MSTQHQILACGNNRFNKLGL 536
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 47/275 (17%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P +V G ++ +V+ G H L +++ +V+ WG G G+LGL ++ H P
Sbjct: 441 PKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQ-----DSHNCP-- 493
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
+Q S+ + +A R + CG S +++ +L G + + G
Sbjct: 494 -------------QQVSLPADFEAQR-----VLCGVDCSMIMSTQHQILACGNNRFNKLG 535
Query: 323 HGSTNDQLRPSYASSLMDIQVEQ--------------IAAGLWHTVCISVEGRVYVFGGN 368
+ PS + ++ + Q I G H+V ++ +G+ + FG N
Sbjct: 536 LDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSN 595
Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
Q GQLG ++ VP + + + +CG + + +G+V +WG G+LG
Sbjct: 596 QHGQLGCSHRRSSRVP----YQVSGLQGITMAACGDAFTLAIGAEGEVYTWGKGARGRLG 651
Query: 429 LGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLL 460
+ D IP V + H F ++AC +TLL
Sbjct: 652 RKEE-DFGIPKPVQLDESHAFTVTSVACCHGNTLL 685
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 328 DQLRPSYASSLMD----IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
+Q++P + S ++ + ++ ++ G T C++ G + FG G LG G
Sbjct: 381 EQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQ 440
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
PK++E L VSCGA H +T + +V SWG G+LGL N P V +
Sbjct: 441 PKIVEA--LLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSL 498
Query: 444 HG-FLPRNIACGWWHTLLLAETTQI 467
F + + CG +++++ QI
Sbjct: 499 PADFEAQRVLCGVDCSMIMSTQHQI 523
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 122/351 (34%), Gaps = 79/351 (22%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSY 85
LPG + P +R G S + CG F ++ G ++T+GS +
Sbjct: 376 LPGAVEQMQP---QFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSN---GC 429
Query: 86 LTSGKHGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
L G + +P + +V+ + G +H ++VT EV++WG D
Sbjct: 430 LGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWG----------RGDN 479
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
G G +DS P + + P+D A
Sbjct: 480 GRLGLATQDSHN----CPQQVSLPADFEA------------------------------- 504
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+V G ++I+S Q+ G +LGL ++ P +E
Sbjct: 505 -----------QRVLCGVDCSMIMSTQHQILACGNNRFNKLGL-DKVSGTEEPSSFCQVE 552
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
+ LV+ +N+ + I G HS VT+ G TFG +GQ G
Sbjct: 553 EVHLFQ----LVQSAPLNTEK------IVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGC 602
Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
P S L I + A G T+ I EG VY +G G+LG
Sbjct: 603 SHRRSSRVPYQVSGLQGITMA--ACGDAFTLAIGAEGEVYTWGKGARGRLG 651
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A +E G+ T+GS + GQ L + P+ + + AA G A ++
Sbjct: 576 GTAHSVAVTEKGQCFTFGS-NQHGQ--LGCSHRRSSRVPYQVSGLQGITMAACGDAFTLA 632
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
+ GEVYTWG + DFG Q D +
Sbjct: 633 IGAEGEVYTWGKGARGRLGRKEEDFGIPKPVQLDES 668
>sp|Q54X24|RCCDA_DICDI RCC1 domain-containing protein DDB_G0279253 OS=Dictyostelium
discoideum GN=DDB_G0279253 PE=4 SV=1
Length = 512
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 47/275 (17%)
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL---GSRIKMVPTPHLIPCL 262
+ N ++I V+ G RH++ LS V+GWG GQL G+ +K + I +
Sbjct: 225 ILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNNNINDI 284
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV-TDAGALLTFGWGLYGQC 321
+D P L+ + +I+CG +H+ ++ + +L+FG +GQ
Sbjct: 285 ADPMV-QDSPKLIN--------FKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQL 335
Query: 322 GHGSTNDQLRP------------SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
G+G+ DQ P S + SL DI++++I G ++ ++ + ++Y+ G +
Sbjct: 336 GNGNFIDQSNPCVIDISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYICGRGE 395
Query: 370 FGQLGTGVDQA-----ENVPKLLETPILESKRAKVVSCGARHSAV----------LTEDG 414
+G LG D + N KLL + + K S G+ H + +
Sbjct: 396 YGILGDNRDLSLDNSNSNQFKLLNSESFNENKIKNFSIGSEHILIQVYSNDNNNNNNNNN 455
Query: 415 QVLSWGWNKYGQLGLGDSI-------DRNIPSLVP 442
+ S+GWN++ QLGL + I +++ P L+P
Sbjct: 456 NIYSFGWNEHYQLGLCEPIIIGKDGDNKSFPQLLP 490
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 31/158 (19%)
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-----------QAENV--PKLL 387
I++ ++ G+ H++ +S E VY +G N+FGQL +D ++ P +
Sbjct: 231 IRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNNNINDIADPMVQ 290
Query: 388 ETPILESKRAKV----VSCGARHSAVLTEDGQ-VLSWGWNKYGQLGLGDSIDRNIPSLVP 442
++P L + + ++ +SCG +H+ +L + + VLS+G NK+GQLG G+ ID++ P ++
Sbjct: 291 DSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQSNPCVID 350
Query: 443 IHGF-LP------------RNIACGWWHTLLLAETTQI 467
I F LP + I CGW ++ LL ++
Sbjct: 351 ISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKL 388
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 20/100 (20%)
Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG------------- 428
N PKL+E R VSCG RHS L+ + V WG NK+GQL
Sbjct: 218 NEPKLIEILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNN 277
Query: 429 ------LGDSIDRNIPSLVPIHGFLP-RNIACGWWHTLLL 461
+ D + ++ P L+ + I+CG+ HTLLL
Sbjct: 278 NNNINDIADPMVQDSPKLINFKNEIKIIQISCGFQHTLLL 317
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 128/337 (37%), Gaps = 79/337 (23%)
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+ +V + G H ++++ +VY WG + FG + ++
Sbjct: 227 FNNKIRIVSVSCGMRHSIALSSENDVYGWGCNK----------FGQLSNLIDGNS----- 271
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
+K ++ + +P D SP L+ +KI +++
Sbjct: 272 -----------------LKSNNNNNNINDIADPMVQD-----SPKLINFKNEIKIIQISC 309
Query: 220 GGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
G +HTL+L + V +G GQLG G+ I PC+ +S +
Sbjct: 310 GFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQSN-----PCVIDISS------FILPT 358
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG-------HGSTNDQLR 331
S + S + +KEI CG +S ++T+ L G G YG G S ++Q +
Sbjct: 359 STSKSLNDIK--IKEIQCGWSNSCLLTNQDKLYICGRGEYGILGDNRDLSLDNSNSNQFK 416
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISV-----------EGRVYVFGGNQFGQLG------ 374
+ S + +++ + G H + I V +Y FG N+ QLG
Sbjct: 417 LLNSESFNENKIKNFSIGSEH-ILIQVYSNDNNNNNNNNNNIYSFGWNEHYQLGLCEPII 475
Query: 375 TGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVL 410
G D ++ P+LL P ++ +V G +S +
Sbjct: 476 IGKDGDNKSFPQLL--PSIKGNDKSLVKAGGGNSFFI 510
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 31/150 (20%)
Query: 310 LLTFGWGLYGQCGHGSTNDQLR------PSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
+ ++G G GQ G G+T+D + P +I V I G H++ I G +Y
Sbjct: 3 IYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEI-VNDIVGGGCHSMMIIDNGDLY 61
Query: 364 VFGGNQFGQLGTGVDQA------------------------ENVPKLLETPILESKRAKV 399
FG N GQLG ++ + +P +L + S + K
Sbjct: 62 TFGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKIKN 121
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
S G HS +G + SWG N +GQLG+
Sbjct: 122 CSGGWAHSLACDNNGNIYSWGSNSHGQLGI 151
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 64/169 (37%), Gaps = 46/169 (27%)
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+++ WG G GQLG+G+ V TP L+ + GK V
Sbjct: 2 KIYSWGSGNLGQLGIGNTDDSVSTPTLV--------------------LPPDGKKDYEIV 41
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND----------------------- 328
+I GG HS ++ D G L TFG GQ G S
Sbjct: 42 NDIVGGGCHSMMIIDNGDLYTFGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQ 101
Query: 329 -QLRPSYAS--SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
Q P+ + + I+++ + G H++ G +Y +G N GQLG
Sbjct: 102 YQTIPTILNYFKINSIKIKNCSGGWAHSLACDNNGNIYSWGSNSHGQLG 150
Score = 35.4 bits (80), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 361 RVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKV--VSCGARHSAVLTEDGQVL 417
++Y +G GQLG G D + + P L+ P + V + G HS ++ ++G +
Sbjct: 2 KIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLY 61
Query: 418 SWGWNKYGQLGL 429
++G N GQLG+
Sbjct: 62 TFGSNDSGQLGI 73
>sp|Q18211|RCC1_CAEEL Regulator of chromosome condensation OS=Caenorhabditis elegans
GN=ran-3 PE=4 SV=1
Length = 569
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 102/248 (41%), Gaps = 51/248 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KI +AAG T L+D G V WG L + V L+ ++ A P
Sbjct: 245 KIVMLAAGASFTAALTDQGSVIAWG-------NLRNSNGNVDVHPLLHKMQEA------P 291
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
+++ +A R VK IA G H ++ + G LLTFG G GQ G S +R
Sbjct: 292 VVIVH-------QAKRKIVK-IAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRS 343
Query: 333 SY-----------------ASSLMDIQVEQI-AAGLWHTVCISVEGRVYVFGGNQFGQLG 374
Y D+ + + A+G W T+ +G+ Y FG N + QLG
Sbjct: 344 KYMCDESGDHLLVPLRFKHKGKFFDVVAKNVFASGFW-TIVHGEDGKYYAFGLNNYAQLG 402
Query: 375 TGVDQAE-----------NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
VD+A+ V E P ++R V G +H +L DG+V + G N
Sbjct: 403 IKVDEADVGQDGQDNRELRVFLPAEAPAFGAERTFVNIEGVQHVVILGSDGKVFAMGKNT 462
Query: 424 YGQLGLGD 431
LGLG+
Sbjct: 463 DNALGLGN 470
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 163/395 (41%), Gaps = 53/395 (13%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQK----DSTGKQSAL 160
++A AG H +T GEVY G E VP+ V ++ GS F K + K+ +
Sbjct: 188 LQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKE-GSTDEFAKVKFEEDIEKEGKI 246
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL--SPCLVTLNPGVKITKVA 218
A S A + + R + N + +P ++ KI K+A
Sbjct: 247 VMLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIA 306
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
AG H ++L + G + +G G GQLG SR K + + ++ C E SG + +R
Sbjct: 307 AGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYM--CDE---SGDHLLVPLR-- 359
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG----------HGSTND 328
GK K + G + V + G FG Y Q G G N
Sbjct: 360 -FKHKGKFFDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNR 418
Query: 329 QLR-------PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG----TGV 377
+LR P++ + + +E G+ H V + +G+V+ G N LG TG
Sbjct: 419 ELRVFLPAEAPAFGAERTFVNIE----GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGK 474
Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLG--DSI 433
D ++ L +T +K+V A+ + + +EDG +WG++ GQLGLG D
Sbjct: 475 DDQQHW--LYDTIQEIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDED 532
Query: 434 DRNIP-----SLVPIHGFLPRNIACGWWHTLLLAE 463
++ + S + G+ + HTL++A+
Sbjct: 533 EKMVSKPEEISSAHLDGYSIIGASISDQHTLIIAK 567
Score = 36.6 bits (83), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 124/349 (35%), Gaps = 70/349 (20%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEG---QSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ G F A ++ G +I WG+ + + K E P + +VK AA
Sbjct: 248 MLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAA 307
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H V + E G + T+G E + +R + D +G +P K
Sbjct: 308 GENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHLLVPLRF-----KH 362
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
G +FF V V A G T++ + G
Sbjct: 363 KG-----------------------KFFD-----------VVAKNVFASGFWTIVHGEDG 388
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD----RPLLVRQGSVNSSGKAG 287
+ + +G QLG+ ++ A G+D R L V + + A
Sbjct: 389 KYYAFGLNNYAQLGIK--------------VDEADVGQDGQDNRELRVFLPAEAPAFGAE 434
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS---TNDQ---LRPSYASSLMDI 341
R++V G +H ++ G + G G G+ +DQ L + D
Sbjct: 435 RTFVN--IEGVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDS 492
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
++ ++A L ++ S +G Y +G + GQLG G+ + K++ P
Sbjct: 493 KIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDEDE--KMVSKP 539
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 128/320 (40%), Gaps = 57/320 (17%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL--GSRIKMV 253
+E +PC L G I +VA G T+IL++ GQV G GQLG+ G R ++
Sbjct: 87 EEVLYFTPCKSLL--GCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVI 144
Query: 254 PTP---------HLIPCLEHAAS-----------------------GKDRPLLVRQGSVN 281
P + L HA + G+ PL + +
Sbjct: 145 PQAIELLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPS 204
Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
+ S + G HSA +TDAG L +G +GQ + L +
Sbjct: 205 TVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCF-- 262
Query: 342 QVEQIAA---GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK--- 395
Q E+IAA G H V +V G+V+ +G +GQLG V+ E + P L
Sbjct: 263 QNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQ 322
Query: 396 -----------RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-I 443
A +SCG+ H+ + G SWGWN++G G G D P VP +
Sbjct: 323 KGTPSCLPCLTGATEISCGSEHNLAVI-GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGL 381
Query: 444 HGFLPRNIACGWWHTLLLAE 463
FL ++ CG H+L L +
Sbjct: 382 RFFLGLHVGCGAGHSLALCQ 401
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR---IKMVPTPHLIPC-LEHAASGK 269
I ++ GG H+ +++D G ++ G +GQLGLG + P L+ C ++ A G
Sbjct: 51 IKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGW 110
Query: 270 DRP-LLVRQGSV-----NSSGKAG-----------------RSYVKEIACGGRHSAVVTD 306
D +L G V NS G+ G R V IA G RH+ T
Sbjct: 111 DFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATA 170
Query: 307 AGALLTFGWGLYGQCGHGSTNDQL-------RPSYASSLMDIQVEQIAAGLWHTVCISVE 359
+G + +G GL L PS + L + Q + AG H+ ++
Sbjct: 171 SGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDA 230
Query: 360 GRVYVFGGNQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
G +YV+G N+ GQL + QA +P+ +E ++++ V G H T G+V
Sbjct: 231 GELYVWGSNKHGQLAS---QAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVF 287
Query: 418 SWGWNKYGQLG 428
+WG YGQLG
Sbjct: 288 TWGRADYGQLG 298
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 83/191 (43%), Gaps = 32/191 (16%)
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
++ WG GQLGLG + E S + + G + K
Sbjct: 17 LFAWGANSYGQLGLGHK-------------EDVLSAQQLSDFCKSGCI-----------K 52
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
I GG HSAVVTD G+L G GQ G G T + L + SL+ ++Q+A G
Sbjct: 53 RITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDF 112
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKVVS--CGARHSAV 409
T+ ++ G+V G N FGQLG + P+ P +E R KVVS G RH+
Sbjct: 113 TIILTENGQVLSCGSNSFGQLGV-----PHGPRRCVIPQAIELLREKVVSIAAGLRHALA 167
Query: 410 LTEDGQVLSWG 420
T G V WG
Sbjct: 168 ATASGTVFQWG 178
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
++ +G N +GQLG G + + L + +S K ++ G HSAV+T++G + G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQL-SDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGL 75
Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFL---PRNIACGWWHTLLLAETTQI 467
NK GQLGLG + + P L + +ACGW T++L E Q+
Sbjct: 76 NKDGQLGLGHT--EEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQV 122
Score = 39.3 bits (90), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 117/334 (35%), Gaps = 79/334 (23%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPLPTEASVVKAAAGWAHC 116
CG F + +E+G++++ GS + GQ + G + P+ L E VV AAG H
Sbjct: 108 CGWDFTIILTENGQVLSCGS-NSFGQLGVPHGPRRCVIPQAIELLRE-KVVSIAAGLRHA 165
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
++ T +G V+ WG G A S ++ G+ L PS E
Sbjct: 166 LAATASGTVFQWG-------------TGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENS 212
Query: 177 VKRRKTSSAREESENPASGDEF---------------FTLSPCLVTLN--PGVKITKVAA 219
+ + + +G+ + F L P + KI V +
Sbjct: 213 QAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWS 272
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK----------MVP-------TPHLIPCL 262
G H + + G+V+ WG GQLG + +P TP +PCL
Sbjct: 273 GWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCL 332
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
A EI+CG H+ V G ++GW +G CG
Sbjct: 333 TGAT--------------------------EISCGSEHNLAVI-GGVCHSWGWNEHGMCG 365
Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
G+ D P L + G H++ +
Sbjct: 366 DGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLAL 399
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 117/269 (43%), Gaps = 54/269 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
++ +V G H+L L+D G+V+ G+G +GQ GLG + TP + G D
Sbjct: 228 QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLG-HYNITSTPSKL--------GGD-- 276
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQL 330
AG + V+ G A+ D G FGWG Y Q + + Q+
Sbjct: 277 ------------LAGVTVVQVATYGDCCLALSADGG---VFGWGNSEYLQLASVTDSTQV 321
Query: 331 RPSYASSLMDI-QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
+ +V+Q+A G ++ EG V+V+G +G LG G PKLLET
Sbjct: 322 NVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWG---YGILGKG-------PKLLET 371
Query: 390 PILE--------------SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR 435
I E + + CG H A LT G++ WG N G LG+G D+
Sbjct: 372 AIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQ 431
Query: 436 NIPSLVPIHGFLPRNIACGWWHTLLLAET 464
P V + G P ++ACG H + LA++
Sbjct: 432 YFPWRVTMPG-EPVDVACGVDHMVTLAKS 459
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 113/272 (41%), Gaps = 41/272 (15%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILS---DMGQVWGWGYGGEGQLGL---------GS 248
+ P L KI+ A G TL+ S D+ +VWG G + QLG G
Sbjct: 93 IQPVPYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGY 152
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
+ P+P +P DRP + V +++CG HS V+TD
Sbjct: 153 EYVLEPSPVPLPL--------DRPQ--------------ETKVLQVSCGRAHSLVLTDRE 190
Query: 309 ALLTFGWGLYGQCGHGSTNDQL----RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
+ + G +GQCG D++ + D QV Q+ G H++ ++ +G VY
Sbjct: 191 GVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYS 250
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
G GQ G G + P L + +V + G A L+ DG V WG ++Y
Sbjct: 251 CGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLA-LSADGGVFGWGNSEY 309
Query: 425 GQLG-LGDSIDRNIPSLVPIHGF-LPRNIACG 454
QL + DS N+P +P G + +ACG
Sbjct: 310 LQLASVTDSTQVNVPRCLPFSGVGKVKQVACG 341
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 149/406 (36%), Gaps = 72/406 (17%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI-TWG-------------SADDEGQS 84
+ P+P RL D G GF L +S++ + WG S D+ +
Sbjct: 93 IQPVPYRL-ELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRG 151
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
Y + P P P E V++ + G AH + +T+ V++ G G
Sbjct: 152 YEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMG----------NNSHG 201
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG---DEFFTL 201
G + + + D + + V + + ++ E + G D L
Sbjct: 202 QCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGL 261
Query: 202 SPCLVTLNP--------GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
+T P GV + +VA G L LS G V+GWG QL + V
Sbjct: 262 GHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQV 321
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
P CL + GK VK++ACGG AV+ G + +
Sbjct: 322 NVPR---CLPFSGVGK---------------------VKQVACGGTGCAVLNAEGHVFVW 357
Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLM-------DIQVEQIAAGLWHTVCISVEGRVYVFG 366
G+G+ G+ G + +L ++QV QI GL H ++ +G ++V+G
Sbjct: 358 GYGILGK-GPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWG 416
Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
N G LG G + + P + P V+CG H L +
Sbjct: 417 KNIRGCLGIGRLEDQYFPWRVTMP----GEPVDVACGVDHMVTLAK 458
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 136/325 (41%), Gaps = 63/325 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILS---DMGQVWGWGYGGEGQLGL---------GS 248
+ P L KI+ A G TL+ S D+ +VWG G + QLG G
Sbjct: 96 IQPVPYRLELDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGY 155
Query: 249 RIKMVPTPHLIPC-------LEHAASGKDRPLLV--RQGSV----NSSGKAGRSYVK--- 292
+ P+P +P + + G+ L++ R+G NS G+ GR V+
Sbjct: 156 EYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEI 215
Query: 293 ------------------EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS- 333
++ACG HS +TD G + + GWG GQ G G N P+
Sbjct: 216 YSESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTK 275
Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPIL 392
L + V Q+A + +S +G ++ +G +++ QL + D + NVP+ L +
Sbjct: 276 LGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGV 335
Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVP--IHGFLPR 449
+ + +CG AVL +G V WG YG LG G + ++ +P ++P + G
Sbjct: 336 --GKVRQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEF 390
Query: 450 N-------IACGWWHTLLLAETTQI 467
N I CG H L ++
Sbjct: 391 NPEIQVSRIRCGLSHFAALTNKGEL 415
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 114/263 (43%), Gaps = 42/263 (15%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDR 271
++ +VA G H+L L+D G+V+ G+G +GQ GLG I PT
Sbjct: 231 QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPT---------------- 274
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQ 329
G V ++A G V+ G L FGWG Y Q + + Q
Sbjct: 275 ---------KLGGDLAGVNVIQVATYGDCCLAVSADGGL--FGWGNSEYLQLASVTDSTQ 323
Query: 330 LRPSYASSLMDI-QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLL 387
+ + +V Q A G ++ EG V+V+G +G LG G + E+ VP+++
Sbjct: 324 VNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMI 380
Query: 388 E------TPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
T + + CG H A LT G++ WG N G LG+G D+ P V
Sbjct: 381 PPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV 440
Query: 442 PIHGFLPRNIACGWWHTLLLAET 464
+ G P ++ACG H + LA++
Sbjct: 441 TMPG-EPVDVACGVDHMVTLAKS 462
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 75/213 (35%), Gaps = 59/213 (27%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA S G L WG+++ + +T P V +AA G C + G
Sbjct: 296 LAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEG 355
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V+ WG+ G K +SA+P E PP+
Sbjct: 356 HVFVWGY----------------GILGKGPNLVESAVP-EMIPPT--------------- 383
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
F L+ NP ++++++ G H L++ G+++ WG G
Sbjct: 384 --------------LFGLT----EFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGC 425
Query: 244 LGLGS--------RIKMVPTPHLIPC-LEHAAS 267
LG+G R+ M P + C ++H +
Sbjct: 426 LGIGRLEDQYFPWRVTMPGEPVDVACGVDHMVT 458
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 109/253 (43%), Gaps = 43/253 (16%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC-------LEHAA 266
+ ++ GG H+ +++D G ++ G +GQLGLG + P+ PC ++ A
Sbjct: 51 VRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDI---PYFTPCKSLFGCPIQQVA 107
Query: 267 SGKDRP-LLVRQGSV-----NSSGKAG-----------------RSYVKEIACGGRHSAV 303
G D +L G V NS G+ G + V IA G RH+
Sbjct: 108 CGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVA 167
Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQL--------RPSYASSLMDIQVEQIAAGLWHTVC 355
T +G + +G GL CG Q PS + L + + + AG H+
Sbjct: 168 ATASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSAS 226
Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
++ G VYV+G N+ GQL VP+ +E ++++ + G H TE G+
Sbjct: 227 LTDAGEVYVWGSNKHGQLANEAAFLP-VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGK 285
Query: 416 VLSWGWNKYGQLG 428
+ +WG YGQLG
Sbjct: 286 MFTWGRADYGQLG 298
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 107/269 (39%), Gaps = 39/269 (14%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ +AAG RH + + G V+ WG G L C G+ P
Sbjct: 154 KVVCIAAGLRHAVAATASGIVFQWGTG------------------LASCGRRLCPGQTLP 195
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-R 331
L + S + G HSA +TDAG + +G +GQ + + + +
Sbjct: 196 LFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQ 255
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
A + +V I +G H V + G+++ +G +GQLG ++ E +
Sbjct: 256 KIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSF 315
Query: 392 LESKR--------------AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
L R A VSCG+ H+ + G SWGWN++G GD + N+
Sbjct: 316 LPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII-GGVCYSWGWNEHGM--CGDGTEANV 372
Query: 438 PSLVPIHGFLPRN---IACGWWHTLLLAE 463
+ P+ L + + CG H+L L +
Sbjct: 373 WAPKPVQALLSSSGLLVGCGAGHSLALCQ 401
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 80/180 (44%), Gaps = 28/180 (15%)
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
GQLGLG K+ LL +Q +N K RS V+ I GG HS
Sbjct: 26 GQLGLGH--------------------KEDVLLPQQ--LNDFCKP-RS-VRRITGGGGHS 61
Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
AVVTD G L G GQ G G T D + SL ++Q+A G T+ ++ G+
Sbjct: 62 AVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQ 121
Query: 362 VYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
V G N FGQLG VP+ +E L ++ ++ G RH+ T G V WG
Sbjct: 122 VLSCGSNSFGQLGVPHGPRRCVVPQAIE---LHKEKVVCIAAGLRHAVAATASGIVFQWG 178
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
YGQ G G D L P + + V +I G H+ ++ G ++V G N+ GQLG G
Sbjct: 25 YGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLG 84
Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
E++P L + V+CG + +LTE+GQVLS G N +GQLG+ R
Sbjct: 85 --HTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRC 142
Query: 437 -IPSLVPIHGFLPRNIACGWWHTL 459
+P + +H IA G H +
Sbjct: 143 VVPQAIELHKEKVVCIAAGLRHAV 166
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N +GQLG G + +P+ L + + + ++ G HSAV+T+ G + G NK GQL
Sbjct: 23 NSYGQLGLGHKEDVLLPQQLND-FCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQL 81
Query: 428 GLGDSIDRNIPSLVP---IHGFLPRNIACGWWHTLLLAETTQI 467
GLG + D IP P + G + +ACGW T++L E Q+
Sbjct: 82 GLGHTED--IPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQV 122
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 129/345 (37%), Gaps = 50/345 (14%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
+P +P KS PI CG D F + +E+G++++ GS + GQ +
Sbjct: 89 IPYFTPCKSLFGCPIQQVACGWD-----------FTIMLTENGQVLSCGS-NSFGQLGVP 136
Query: 88 SG-KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------RECVPSAKVT 140
G + P+ L E VV AAG H V+ T +G V+ WG R P +
Sbjct: 137 HGPRRCVVPQAIELHKE-KVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLP 195
Query: 141 RDFGSAGSFQK---DSTGKQSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASG 195
F + + +++ L S AGE V + A E + P
Sbjct: 196 LFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQ 255
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI----K 251
+ C K+T + +G H + ++ G+++ WG GQLG K
Sbjct: 256 K---IEAHCFQN----EKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWK 308
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
+ +PC S P + + E++CG H+ + G
Sbjct: 309 LEKQDSFLPCSRPPNSMPSSPHCLTGAT-------------EVSCGSEHNLAII-GGVCY 354
Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
++GW +G CG G+ + P +L+ + G H++ +
Sbjct: 355 SWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLAL 399
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 86/234 (36%), Gaps = 48/234 (20%)
Query: 198 FFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
FFT P VT K V AG H+ L+D G+V+ WG GQ L + +P P
Sbjct: 197 FFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ--LANEAAFLPVP 254
Query: 257 HLIP--CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
I C ++ V I G H T+ G + T+G
Sbjct: 255 QKIEAHCFQN------------------------EKVTAIWSGWTHLVAQTETGKMFTWG 290
Query: 315 WGLYGQCGHG---------STNDQLRP------SYASSLMDIQ-VEQIAAGLWHTVCISV 358
YGQ G D P S SS + +++ G H + I +
Sbjct: 291 RADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAI-I 349
Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
G Y +G N+ G G G + PK ++ L S +V CGA HS L +
Sbjct: 350 GGVCYSWGWNEHGMCGDGTEANVWAPKPVQA--LLSSSGLLVGCGAGHSLALCQ 401
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 27/133 (20%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
VY+WG P+P ++ C + G +A +E+GK+ TWG A
Sbjct: 233 VYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRA 292
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV------KAAAGWAHCVS-VTEA--------- 122
D Y G+ ET E + L + S + + HC++ TE
Sbjct: 293 D-----YGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLA 347
Query: 123 ---GEVYTWGWRE 132
G Y+WGW E
Sbjct: 348 IIGGVCYSWGWNE 360
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 146/374 (39%), Gaps = 74/374 (19%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VV A G H +++ G VYTWG + ++T+D QKD G + +
Sbjct: 110 VVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKD-------QKDENGDKVDNDLLEG 162
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDE-------FFTLSPCLVTLNPGVK----- 213
PS + R T ++ A D F S ++ + K
Sbjct: 163 TPSKVEGA--LSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEP 220
Query: 214 -------ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG---LGSRIKMVPTPHLIPCLE 263
I ++A G H + L+ G+V+ WG G + QLG L R TP
Sbjct: 221 TQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTP------- 273
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
+PL ++ + + G HS + + G + +G + QCG
Sbjct: 274 -------QPLALKN-------------IISVGAGSYHSFAIDNKGRVYAWGLNITRQCGI 313
Query: 324 GSTNDQ-----LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG---- 374
+++ +P+ +L V+ I G HT+ + +GRV +G + QLG
Sbjct: 314 EVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDN 373
Query: 375 ----TGVDQAENVPKLLETPILESKRAKVVS--CGARHSAVLTEDGQVLSWGWNKYGQLG 428
T V + L TP + V+ CG H+ +T DG+V SWG + ++G
Sbjct: 374 ALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVG 433
Query: 429 LGDSI-DRNIPSLV 441
GD+ D +P+LV
Sbjct: 434 QGDNDEDVAVPTLV 447
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 32/279 (11%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L+P L T GV +A GG H+ LS G+V+ WG + LG ++ +
Sbjct: 99 LNPILSTDKVGV--VDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQK-------- 148
Query: 261 CLEHAASGKDRPLLVRQGSVNS-SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
+ D LL +G+ + G V ++ C +A +TD G F WG +
Sbjct: 149 --DENGDKVDNDLL--EGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCC--FTWGTF- 201
Query: 320 QCGHGS---TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
+C G ++ Q R + + + ++ Q+A G H + ++ G+VY +G Q QLG
Sbjct: 202 RCSDGVLGYSDSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRR 261
Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL------- 429
+ + + L P L K V G+ HS + G+V +WG N Q G+
Sbjct: 262 MLERRRLQGLTPQP-LALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEE 320
Query: 430 GDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
G I + P+LV + G+ ++I G HTL L E ++
Sbjct: 321 GAVITK--PTLVDALEGYNVKSITGGEHHTLALLEDGRV 357
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 140/393 (35%), Gaps = 103/393 (26%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGFAL--ATSESGKLITWGS--ADDEGQSYLTSGKHGE 93
+L P+++ G S V C L A +++G TWG+ D Y S K
Sbjct: 159 LLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTA 218
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
P LP + + A G H +++T G+VYTWG
Sbjct: 219 EPTQMRLP---EICQLATGTDHIIALTTTGKVYTWG------------------------ 251
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
G+Q L G +++RR+ L+P + L
Sbjct: 252 NGQQFQL------------GRRMLERRRLQG----------------LTPQPLALK---N 280
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK----MVPTPHLIPCLEHAASGK 269
I V AG H+ + + G+V+ WG Q G+ + ++ P L+ LE
Sbjct: 281 IISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYN--- 337
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG------- 322
VK I G H+ + + G +L +G Q G
Sbjct: 338 ---------------------VKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALP 376
Query: 323 HGSTNDQLRPSYASSLMDI-----QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG- 376
D+ +Y S I V Q+ G H + ++ +G+VY +G + ++G G
Sbjct: 377 ETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGD 436
Query: 377 VDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
D+ VP L+ + ++ +V G + S +
Sbjct: 437 NDEDVAVPTLVRSKAIKEVAIRVAGAGGQFSII 469
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV--SCGARHSAVLTEDGQVLSW 419
VYVFG +LG G ++ + V + PIL + + VV + G HSA L+ DG+V +W
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 420 GWNKYGQLGL---------GDSIDRNI 437
G N LG GD +D ++
Sbjct: 133 GVNDDYALGRLTKDQKDENGDKVDNDL 159
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 155/405 (38%), Gaps = 79/405 (19%)
Query: 76 GSADDEGQSYLTSGKHGETP--EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
GS + G L K + P PF EA ++ A G H +++ E V++WG +
Sbjct: 54 GSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCND- 112
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA 193
G+ +D++ + L A S ++ + T + P
Sbjct: 113 ------------VGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPP 160
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG--GEGQLGL-GSRI 250
L G K+ ++AA + L G+V+ WG EG LG +I
Sbjct: 161 --------------LAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKI 206
Query: 251 KMVPTPHLIPCLE-----HAASGKDRPLLVRQ---------GSVNSSGKA---------- 286
K+ TP +P A GKD L + + G N G+
Sbjct: 207 KIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTL 266
Query: 287 -----GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ----LRPSYASS 337
G +VK IA G H +T L+++G +GQCG + +P +
Sbjct: 267 DPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLAL 326
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD------------QAENVPK 385
++ + IAAG H++ +S +G +Y G ++G D +A VP
Sbjct: 327 PDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVP- 385
Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
L T + + K V+ G+ HS + ++G SWG+ + +GLG
Sbjct: 386 -LPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLG 429
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 117/279 (41%), Gaps = 29/279 (10%)
Query: 208 LNPGV-----KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-----RIKMVPTPH 257
LNP + KI A GG HTL L + VW WG G LG + ++K +
Sbjct: 75 LNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADD 134
Query: 258 LIPCLEHAASG-KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
+ + + P + + S + + V ++A S + G + + WG
Sbjct: 135 SSDDEDGDLNELESTPAKIPRESFPPLAEGHK--VVQLAATDNMSCALFSNGEV--YAWG 190
Query: 317 LYGQCGHG-------STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
+ +C G Q P + + Q+A G H + + EG V+ +G Q
Sbjct: 191 TF-RCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQ 249
Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
QLG V + + L P + K ++ G H LT+D +++SWG N++GQ G+
Sbjct: 250 QNQLGRKVMERFRLKTLDPRP-FGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGV 308
Query: 430 GDSIDRNIPSLVPIHGFLP-----RNIACGWWHTLLLAE 463
+ ++ P LP R+IA G H+L+L++
Sbjct: 309 SEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQ 347
>sp|Q54Q89|RCCDC_DICDI RCC1 repeat-containing protein DDB_G0284033 OS=Dictyostelium
discoideum GN=DDB_G0284033 PE=4 SV=2
Length = 487
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 37/234 (15%)
Query: 213 KITKVAAGGRHTLI-----LSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAA 266
KI K+ +G +++ + D +G G + QL +G+ +I+ + L+
Sbjct: 111 KINKITSGTTYSIFSGYDQIKDRQVFYGCGDNRDAQLIVGNGKIQSLENIELL------- 163
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV-------------TDAGALLTF 313
+ P+L S + +K++ G H+A + D +L +
Sbjct: 164 ---ESPML-------KSDQMKGKQLKQLISGTYHNACILNDSNSNNNNNNNKDRSLILLW 213
Query: 314 GWGLYGQCGHGSTND-QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
G GQ G N Q P L +I +++I+ G T+ +S +G++Y FG + F +
Sbjct: 214 GASNSGQIGSPEYNRVQYDPYNNKVLSEIGIKKISMGATFTIALSNDGKLYSFGSSTFNE 273
Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
LG G E PKL++ +L+ + CG H+ LT D ++L+WG N+ Q
Sbjct: 274 LGNGDMFNEREPKLIDNQLLQDNEIIDLECGFFHTVALTSDNKILTWGRNQESQ 327
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 52/270 (19%)
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN--SSGK--- 285
+V+ WG G G+LG G + P I E D + QG +N +SG
Sbjct: 67 NKVYSWGSGLNGKLGHGLDETKIVVPKEIEIKE----DDDNNRVFNQGKINKITSGTTYS 122
Query: 286 --AGRSYVKE----IACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL--RPSYAS 336
+G +K+ CG R + ++ G + + N +L P S
Sbjct: 123 IFSGYDQIKDRQVFYGCGDNRDAQLIVGNGKIQSL------------ENIELLESPMLKS 170
Query: 337 SLMD-IQVEQIAAGLWHTVCI-------------SVEGRVYVFGGNQFGQLGT-GVDQAE 381
M Q++Q+ +G +H CI + ++G + GQ+G+ ++ +
Sbjct: 171 DQMKGKQLKQLISGTYHNACILNDSNSNNNNNNNKDRSLILLWGASNSGQIGSPEYNRVQ 230
Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
P +L K +S GA + L+ DG++ S+G + + +LG GD + P L+
Sbjct: 231 YDP--YNNKVLSEIGIKKISMGATFTIALSNDGKLYSFGSSTFNELGNGDMFNEREPKLI 288
Query: 442 PIHGFLPRN----IACGWWHTLLLAETTQI 467
+ L N + CG++HT+ L +I
Sbjct: 289 D-NQLLQDNEIIDLECGFFHTVALTSDNKI 317
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 95/231 (41%), Gaps = 41/231 (17%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+ I K++ G T+ LS+ G+++ +G +LG G P LI D
Sbjct: 242 IGIKKISMGATFTIALSNDGKLYSFGSSTFNELGNGDMFNE-REPKLI----------DN 290
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC-------GHG 324
LL + + ++ CG H+ +T +LT+G QC G G
Sbjct: 291 QLL------------QDNEIIDLECGFFHTVALTSDNKILTWGRNQESQCFPVPEGTGKG 338
Query: 325 S-TNDQLRPSYASSLMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
S TN Q + SSL D ++ QI A ++ ++ G +Y G N GQ G + N
Sbjct: 339 SFTNVQYLDT--SSLGDHDKIIQIGASNLNSYILTENGNIYSIGSNDHGQCGI---EKSN 393
Query: 383 VPK--LLETPILESKRAKVVSCGARHSAVLTE--DGQVLSWGWNKYGQLGL 429
K L + I + KV +R V+ E DG+ WG N QL L
Sbjct: 394 FKKGILNKIKIGDDGNIKVKKFYSRFKTVIVETTDGRFFGWGSNFDHQLAL 444
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 109/263 (41%), Gaps = 36/263 (13%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I V GG H+ +++D G ++ G +GQLGLG H L R
Sbjct: 51 IKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLG---------HTEEVLRFTICKPLRGC 101
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
+RQ +ACG + ++T+ G +L+ G +GQ G +
Sbjct: 102 PIRQ----------------VACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVP 145
Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL------ 387
A + +V +AAGL H + + G V+ +G G + +N+P L
Sbjct: 146 QAIECLREKVVCVAAGLRHALATTATGSVFQWG-TGLASSGRRLCPGQNLPLFLTAKEPS 204
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
LE+ A G+ HSA LT+ G++ WG NK+GQL ++ +P + H F
Sbjct: 205 RVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA-SRAVFLPLPQRIEAHYFQ 263
Query: 448 PRNIAC---GWWHTLLLAETTQI 467
+ GW H + ET ++
Sbjct: 264 DEKVTAVWSGWTHLVAKTETGKV 286
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+S ++ WG GQLGLG K+ L +Q ++ +A
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGH--------------------KEDVFLPQQ--LSDFCQA 48
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
G +K + GG HSAVVTD G L G GQ G G T + LR + L + Q+
Sbjct: 49 G--CIKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQV 106
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKV--VSCG 403
A G T+ ++ +G+V G N FGQLG + P+ P +E R KV V+ G
Sbjct: 107 ACGWDFTIMLTEKGQVLSCGSNAFGQLGV-----PHGPRKCVVPQAIECLREKVVCVAAG 161
Query: 404 ARHSAVLTEDGQVLSWG 420
RH+ T G V WG
Sbjct: 162 LRHALATTATGSVFQWG 178
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 124/308 (40%), Gaps = 59/308 (19%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE------- 263
G I +VA G T++L++ GQV G GQLG+ + P I CL
Sbjct: 100 GCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVA 159
Query: 264 ----HAAS-----------------------GKDRPL-LVRQGSVNSSGKAGRSYVKEIA 295
HA + G++ PL L + +G + V +A
Sbjct: 160 AGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA 219
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIAAGLWHTV 354
G HSA +TD G L +G +GQ + L + A D +V + +G H V
Sbjct: 220 -GSDHSASLTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLV 278
Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKL--------------LETPILESKRAKVV 400
+ G+V+ +G +GQLG ++ E + + +P+ A +
Sbjct: 279 AKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEI 338
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----IACGW 455
SCG+ H+ + D + SWGWN++G GD + N+ + P+ P + CG
Sbjct: 339 SCGSEHNLAVIRD-KCCSWGWNEHGM--CGDGTESNVWTPTPVQALPPSPSRLLLVGCGA 395
Query: 456 WHTLLLAE 463
H+L + +
Sbjct: 396 GHSLAVCQ 403
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVE 359
S V+ A L +G YGQ G G D P S ++ + G H+ ++
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDG 67
Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
G ++V G N+ GQLG G E V + L + V+CG + +LTE GQVLS
Sbjct: 68 GDLFVCGLNKDGQLGLG--HTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSC 125
Query: 420 GWNKYGQLGL 429
G N +GQLG+
Sbjct: 126 GSNAFGQLGV 135
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 23/99 (23%)
Query: 43 PARLCGGDSWKDVCG-GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE----- 96
P+R+ G ++ VC G + + +++G+L WG KHG+
Sbjct: 203 PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGR-----------NKHGQLASRAVFL 251
Query: 97 PFPLPTEA------SVVKAAAGWAHCVSVTEAGEVYTWG 129
P P EA V +GW H V+ TE G+V+TWG
Sbjct: 252 PLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 53 KDVC-GGGCGFALATSESGKLITWGSADDEGQSYLTSGKH------GETPEPFPLPTEAS 105
K VC G ALAT+ +G + WG+ L G++ + P ++
Sbjct: 154 KVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENST 213
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
V A AG H S+T+ GE+Y WG
Sbjct: 214 AVCAVAGSDHSASLTDTGELYVWG 237
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,794,238
Number of Sequences: 539616
Number of extensions: 8844025
Number of successful extensions: 16414
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 14767
Number of HSP's gapped (non-prelim): 682
length of query: 467
length of database: 191,569,459
effective HSP length: 121
effective length of query: 346
effective length of database: 126,275,923
effective search space: 43691469358
effective search space used: 43691469358
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)