BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012246
(467 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
Length = 444
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 142/319 (44%), Positives = 190/319 (59%), Gaps = 57/319 (17%)
Query: 106 SMMTVGSSHCGSNQVAYDLDMSRASSSGLNDDVRKVISPSERGKTETIEPTVTSSSGGSG 165
S++TVG SHCGSNQ S+ ++ +S S+R K E TSS G SG
Sbjct: 146 SVITVGPSHCGSNQ-----------STNIHQATTLPVSMSDRSKN-VEERLDTSSGGSSG 193
Query: 166 SSFNRTSKQSTGDNS--LKRKSRDAVDSECQSEA---AGFESG----AGNKTAQRSGSCR 216
S+ R +K++ S + RK + +D++ +S + G S GNK++QRSGS R
Sbjct: 194 CSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTR 253
Query: 217 RSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMW 276
RSRAAEVHNLSERRRRDRINE+M+ALQELIPHC++TDKAS+LDEAI+YLKSLQ+QLQVMW
Sbjct: 254 RSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMW 313
Query: 277 MGSGM--------APLMFPGMQH--YMSRMGMGMGPPPLPSVTNPMHFSRVPLVDQSMSM 326
MGSGM +P+MFPG+Q Y+++M M + M S+ P++++S
Sbjct: 314 MGSGMAAAAAAAASPMMFPGVQSSPYINQMAM----------QSQMQLSQFPVMNRS--- 360
Query: 327 AQAQNRAVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHP--------MQ-ANSQPMNM 377
A + ++CQ NPV Q Q QN +EQ ARYMG P MQ QP +M
Sbjct: 361 APQNHPGLVCQ----NPVQLQLQAQNQILSEQLARYMGGIPQMPPAGNQMQTVQQQPADM 416
Query: 378 FRFGSPTMQNQIVSLPSSS 396
FGSP +S P+++
Sbjct: 417 LGFGSPAGPQSQLSAPATT 435
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
Length = 430
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 177/324 (54%), Gaps = 47/324 (14%)
Query: 94 SGNLTQGEVRECSMMTVGSSHCGSNQVAYDLDMSRASSSGLNDDVRKVISPSERGKTETI 153
S + + E+ + S+ TVG SHCGSN DLD+S + N + + ++P+ +
Sbjct: 145 SSGIRETEMEQYSVTTVGPSHCGSNPSQNDLDVSMSHDRSKN--IEEKLNPNASSSSGGS 202
Query: 154 EPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQRSG 213
+S + T D KRK + D E+ GNK+ QRSG
Sbjct: 203 SGCSFGKDIKEMAS----GRCITTDR--KRKRINHTD-----ESVSLSDAIGNKSNQRSG 251
Query: 214 SCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQ 273
S RRSRAAEVHNLSERRRRDRINE+M+ALQELIPHC+KTDKAS+LDEAI+YLKSLQLQLQ
Sbjct: 252 SNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQ 311
Query: 274 VMW------MGSGMAPLMFPGMQHYMSRMGMGMGPPPLPSVTNPMHFSRVPLVDQSMSMA 327
VMW + AP+MFPG+Q + + +P+ R P++DQS A
Sbjct: 312 VMWMGSGMAAAAASAPMMFPGVQPQQF----------IRQIQSPVQLPRFPVMDQS---A 358
Query: 328 QAQNRAVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHP-MQANS--QPMNMFRFGSPT 384
N ++CQ NPV QN ++++ARY+G P MQA + QPM M RF SP
Sbjct: 359 IQNNPGLVCQ----NPV------QNQIISDRFARYIGGFPHMQAATQMQPMEMLRFSSPA 408
Query: 385 MQNQIVSLPSSSCVPFSGGAATDN 408
Q PSS + G+ D+
Sbjct: 409 GQQS--QQPSSVPTKTTDGSRLDH 430
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 119/176 (67%), Gaps = 9/176 (5%)
Query: 124 LDMSRASSSGLNDDVRKVISPSERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKR 183
L+ S AS++ ++ +IS K + E V SS GSG+S + S+ + SLKR
Sbjct: 247 LNESVASATPKDNQKACLISEDSCRKDQESEKAVVCSSVGSGNSLDGPSESPSL--SLKR 304
Query: 184 KSRDAVDSECQSEAAGFESGAGNKTA--QRSG-SCRRSRAAEVHNLSERRRRDRINEKMR 240
K + D +C SE ESG G K A R+G +RSR+AEVHNLSERRRRDRINEKMR
Sbjct: 305 KHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMR 364
Query: 241 ALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSG--MAP-LMF-PGMQHY 292
ALQELIP+CNK DKASMLDEAIEYLKSLQLQ+Q+M M SG + P +MF PGM HY
Sbjct: 365 ALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGMGHY 420
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 163/306 (53%), Gaps = 35/306 (11%)
Query: 87 GQFDRKRSGN----LTQGEVRECSMMT------VGSSHCGSNQVAYDLDMSRASSSGLND 136
G F+ R G L++ VRE + ++ +S G + D S + G +
Sbjct: 153 GDFNNGRGGESGPLLSKAVVRESTQVSPSATPSAAASESGLTRRTDGTDSSAVAGGGAYN 212
Query: 137 DVRKVISPSERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSE 196
K ++ + IE T TSSS S S + T + KRK R+A ++ ++E
Sbjct: 213 RKGKAVAMT----APAIEITGTSSSVVSKSEIE---PEKTNVDDRKRKEREATTTD-ETE 264
Query: 197 AAGFESGAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKAS 256
+ E+ + + S +RSRAAEVHNLSER+RRDRINE+M+ALQELIP CNK+DKAS
Sbjct: 265 SRSEETKQARVS---TTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKAS 321
Query: 257 MLDEAIEYLKSLQLQLQVMWMGSGMAPLMFPGMQHYMSRMGMGMG-----PPPLPSVTNP 311
MLDEAIEY+KSLQLQ+Q+M MG GM P+M+PGMQ YM M MGMG PPP
Sbjct: 322 MLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQYMPHMAMGMGMNQPIPPPSFMPFPN 381
Query: 312 MHFSRVPLVDQS--------MSMAQAQNRAVMCQASVLNPVNYQNQMQNSNFTEQYARYM 363
M ++ PL Q+ + + V +P + Q Q + +T+ Y ++
Sbjct: 382 MLAAQRPLPTQTHMAGSGPQYPVHASDPSRVFVPNQQYDPTSGQPQYP-AGYTDPYQQFR 440
Query: 364 GFHPMQ 369
G HP Q
Sbjct: 441 GLHPTQ 446
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 103/185 (55%), Gaps = 17/185 (9%)
Query: 127 SRASSSGLNDDVRKVISPSERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSL----K 182
SRA+ +G V RGK IE T S G + +Q + + K
Sbjct: 191 SRATVTGGVSRTFAVPGLGPRGKAVAIETAGTQSWGLCKAETEPVQRQPATETDITDERK 250
Query: 183 RKSRDAVDSECQSEAAGFESGAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRAL 242
RK+R+ + E Q G + A+ S S +RSRAA +H LSERRRR +INE M+AL
Sbjct: 251 RKTREETNVENQ----------GTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKAL 300
Query: 243 QELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSGMA-PLMFPG--MQHYMSRMGMG 299
QEL+P C KTD++SMLD+ IEY+KSLQ Q+Q+ MG M P+M+ G Q YM M MG
Sbjct: 301 QELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPPMMYAGNIQQQYMPHMAMG 360
Query: 300 MGPPP 304
M PP
Sbjct: 361 MNRPP 365
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 90/145 (62%), Gaps = 9/145 (6%)
Query: 163 GSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQ-----RSGSCRR 217
S S F+R + + SLKRK D + E + + + + Q R +R
Sbjct: 168 ASSSKFSRGTSRDLSCCSLKRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKR 227
Query: 218 SRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWM 277
R+ EVH L ER+RRD N+KMRALQ+L+P+C K DKAS+LDEAI+Y+++LQLQ+Q+M M
Sbjct: 228 KRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
Query: 278 GSGMA--PLMFPGMQHYMSRMGMGM 300
G+G+ P M P M HY S MG+GM
Sbjct: 288 GNGLIRPPTMLP-MGHY-SPMGLGM 310
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 93/171 (54%), Gaps = 26/171 (15%)
Query: 147 RGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGN 206
+GK +E T SSG + Q ++ LK + E G
Sbjct: 199 KGKAVAVEAAGTPSSGVCKAETEPVQIQPATESKLKAR----------------EETHGT 242
Query: 207 KTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLK 266
+ A+ S S +RSR AE+HNL+ERRRR++INEKM+ LQ+LIP CNK+ K S LD+AIEY+K
Sbjct: 243 EEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVK 302
Query: 267 SLQLQLQVMWMGSGMAPLMFPG-MQHYMSRMGMGMGPP----PLPSVTNPM 312
SLQ Q+Q M M+P+M G Q +M M M M P P P + PM
Sbjct: 303 SLQSQIQGM-----MSPMMNAGNTQQFMPHMAMDMNRPPPFIPFPGTSFPM 348
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 192 ECQSEAAGF----ESGAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIP 247
+C+SE G E+ + S +R RAAEVHNLSE+RRR RINEKM+ALQ LIP
Sbjct: 166 DCESEEGGEAVVDEAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIP 225
Query: 248 HCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSG--MAPLMFPG 288
+ NKTDKASMLDEAIEYLK LQLQ+Q++ M +G + PL PG
Sbjct: 226 NSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINLHPLCLPG 268
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 96/175 (54%), Gaps = 27/175 (15%)
Query: 205 GNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 264
G + A+ S S +RSRAAE+HNL+ERRRR++INE+M+ LQ+LIP CNK+ K SML++ IEY
Sbjct: 136 GTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEY 195
Query: 265 LKSLQLQLQV----MWMGSGMAPLMFP-GMQHYMSRMGMGMGPPPLPSVTNPMHFSRVPL 319
+KSL++Q+ M MG P P Q +M+ +G PP P F +
Sbjct: 196 VKSLEMQINQFMPHMAMGMNQPPAYIPFPSQAHMAGVGPSYPPPRYP-------FPNIQT 248
Query: 320 VDQSMSMAQAQNRAVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHPMQANSQP 374
D S V Q+ NPV+ Q QM Y +++G H MQ + P
Sbjct: 249 FDPS---------RVWLQSPQPNPVSNQPQM------NPYGQFVGHHQMQQSLPP 288
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 209 AQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSL 268
A++ S +R+ A+ HNLSE++RR +INEKM+ALQ+LIP+ NKTDKASMLDEAIEYLK L
Sbjct: 83 AKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQL 142
Query: 269 QLQLQVMWM--GSGMAPLMFP 287
QLQ+Q + + G G+ P+ P
Sbjct: 143 QLQVQTLAVMNGLGLNPMRLP 163
>sp|Q8GT73|BH119_ARATH Transcription factor bHLH119 OS=Arabidopsis thaliana GN=BHLH119
PE=2 SV=2
Length = 544
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 133/257 (51%), Gaps = 33/257 (12%)
Query: 147 RGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKR-KSRDAVDSECQSEAAGFESGAG 205
RGK E TS SG + + R Q + + K R+ +E Q G
Sbjct: 294 RGKEVATETAGTSYSGVNKAETERVQIQPERETKITEDKKREETIAEIQ----------G 343
Query: 206 NKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYL 265
+ A S S +RSRAA++HNLSERRRR+RINE+M+ LQEL+P C KTDK SML++ IEY+
Sbjct: 344 TEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYV 403
Query: 266 KSLQLQLQVMWMGSGMAPLMFP--GMQHYMSRMGMGMG----PP---PLPSVT--NPMHF 314
KSLQLQ+Q+M MG GM P M Q +M M MGM PP P P T P H
Sbjct: 404 KSLQLQIQMMSMGHGMMPPMMHEGNTQQFMPHMAMGMKGMNRPPPFVPFPGKTFPRPGHM 463
Query: 315 SRV----PLVDQSMSMAQAQNRAVMCQASVL-NPVNYQNQMQNSNFTEQYARYMGFHPMQ 369
+ V P + QA + + + S+ NPV NQ + + Y++++G H MQ
Sbjct: 464 AGVGPSYPALRYPFPDTQASDLSRVHVPSLHSNPV--PNQPRFPAYINPYSQFVGLHQMQ 521
Query: 370 ANSQPMNMFRFGSPTMQ 386
P+ G PT Q
Sbjct: 522 QPPLPLQ----GQPTSQ 534
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 77/131 (58%), Gaps = 17/131 (12%)
Query: 145 SERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGA 204
S+R +T + TS+S GS DN++ D DS C S +
Sbjct: 156 SQRLTMDTYDVGFTSTSMGSH------------DNTI-----DDHDSVCHSRPQMEDEEE 198
Query: 205 GNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 264
+ S S +RSRAA +HN SER+RRD+IN++M+ LQ+L+P+ +KTDKASMLDE IEY
Sbjct: 199 KKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEY 258
Query: 265 LKSLQLQLQVM 275
LK LQ Q+ +M
Sbjct: 259 LKQLQAQVSMM 269
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 53/63 (84%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 274
RR +A + H+++ER RR+RI E+M+ALQEL+P+ NKTDKASMLDE I+Y+K LQLQ++V
Sbjct: 140 ARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 199
Query: 275 MWM 277
+ M
Sbjct: 200 LSM 202
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 64/91 (70%), Gaps = 5/91 (5%)
Query: 191 SECQSEAAGFESGAGNKTAQRSGS----CRRSRAAEVHNLSERRRRDRINEKMRALQELI 246
++ QS+A + G TAQ RR +A + H+++ER RR+RI E+M++LQEL+
Sbjct: 105 TQTQSQATA-SATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELV 163
Query: 247 PHCNKTDKASMLDEAIEYLKSLQLQLQVMWM 277
P+ NKTDKASMLDE I+Y+K LQLQ++V+ M
Sbjct: 164 PNGNKTDKASMLDEIIDYVKFLQLQVKVLSM 194
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 53/63 (84%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 274
RR +A + H+++ER RR+RI E+M++LQEL+P+ NKTDKASMLDE IEY++ LQLQ++V
Sbjct: 101 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKV 160
Query: 275 MWM 277
+ M
Sbjct: 161 LSM 163
>sp|Q8L5W7|PIF6_ARATH Transcription factor PIF6 OS=Arabidopsis thaliana GN=PIF6 PE=1 SV=1
Length = 363
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 211 RSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQL 270
R +R R AE +N ER +R+ IN+KMR LQ L+P+ +K D SMLDEAI Y+ +LQL
Sbjct: 180 RKALVKRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQL 239
Query: 271 QLQVMWMGSGMAP--LMFPGMQHYMSRMGMGMG 301
Q+Q+M MG+ +M P +Y S+MG+ MG
Sbjct: 240 QVQMMTMGNRFVTPSMMMPLGPNY-SQMGLAMG 271
>sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis thaliana GN=BHLH72 PE=1
SV=2
Length = 366
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 15/141 (10%)
Query: 156 TVTSSSGGSGSSF-----NRTSKQS-TGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTA 209
+VT+S+ G+ S+ R+ K + TGD R + D+E + E+G N
Sbjct: 105 SVTASASGTNMSWASFESGRSLKTARTGDRDYFRSGSETQDTEGDEQETRGEAGRSN--- 161
Query: 210 QRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQ 269
RR RAA +HN SERRRRDRIN++MR LQ+L+P +K DK S+LD+ IE+LK LQ
Sbjct: 162 -----GRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQ 216
Query: 270 LQLQVMWMGSGM-APLMFPGM 289
Q+Q M + + + +M P +
Sbjct: 217 AQVQFMSLRANLPQQMMIPQL 237
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 87/167 (52%), Gaps = 18/167 (10%)
Query: 158 TSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQRSGS--- 214
+ SSGG+G + + S+ S K++ R D E + + + + A ++ S
Sbjct: 152 SQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQ 211
Query: 215 -------------CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDE 260
RR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA MLDE
Sbjct: 212 PSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDE 271
Query: 261 AIEYLKSLQLQLQVMWMG-SGMAPLMFPGMQHYMSRMGMGMGPPPLP 306
I Y++SLQ Q++ + M S + P++ ++ +++ + P P
Sbjct: 272 IINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSAPTFP 318
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 18/159 (11%)
Query: 142 ISPSERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFE 201
+ +E +E + T +++ GS S + S N+ K + R A +S E G E
Sbjct: 57 VDKTENSGSEKLANTTKTATTGSSSCDQLSHGPSAITNTGKTRGRKARNSNNSKE--GVE 114
Query: 202 SGAGNKTAQRSGS------------CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHC 249
K Q+ GS RR +A + H+L+ER RR++I+E+MR LQ L+P C
Sbjct: 115 GRKSKK--QKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGC 172
Query: 250 NK-TDKASMLDEAIEYLKSLQLQLQVMWMG-SGMAPLMF 286
+K T KA MLDE I Y+++LQ Q++ + M + ++P+++
Sbjct: 173 DKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVY 211
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 10/96 (10%)
Query: 201 ESGAGNKTAQRSGSCRRSRAAEV--HNLSERRRRDRINEKMRALQELIPHCNKTDKASML 258
E G +K +G R SR A +L R+RR+RINE++R LQ L+P+ K D ++ML
Sbjct: 223 EDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTML 282
Query: 259 DEAIEYLKSLQLQLQV-----MWMGSGMAPLMFPGM 289
+EA++Y+K LQLQ+++ +WM AP+ + GM
Sbjct: 283 EEAVQYVKFLQLQIKLLSSDDLWM---YAPIAYNGM 315
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 273
RR +A H+L+ER RR++I+E+MR LQEL+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 208 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 267
Query: 274 VMWM 277
+ M
Sbjct: 268 FLSM 271
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 15/112 (13%)
Query: 190 DSECQSEAAGFESGAG-----NKTAQRSGSCRRSRAAEV--HNLSERRRRDRINEKMRAL 242
+S C + G E + +K +G R SR A +L R+RR+RINE++R L
Sbjct: 236 ESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRIL 295
Query: 243 QELIPHCNKTDKASMLDEAIEYLKSLQLQLQV-----MWMGSGMAPLMFPGM 289
Q L+P+ K D ++ML+EA+ Y+K LQLQ+++ +WM AP+ F GM
Sbjct: 296 QNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWM---YAPIAFNGM 344
>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis thaliana GN=HFR1 PE=1 SV=1
Length = 292
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 8/75 (10%)
Query: 227 SERRRRD-RINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSGMAPLM 285
S+RRRRD +++ KMR LQ+L+P+C+KTDK S+LD+ IEY+K+LQLQLQ+M G+ P
Sbjct: 141 SKRRRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMM-STVGVNPYF 199
Query: 286 FPGMQHYMSRMGMGM 300
P +G GM
Sbjct: 200 LPAT------LGFGM 208
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 273
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 260 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319
Query: 274 VMWMG-SGMAPLMFPGMQHYMSRMGMGMGPPPLPSVTNPMHFSRVPLVDQSMSMAQAQNR 332
+ M S + + M +S+ PS N MH +V +D S +
Sbjct: 320 FLSMKLSSVNTRLDFNMDALLSK-------DIFPSSNNLMHHQQVLQLDSSAETLLGDHH 372
Query: 333 AVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHPMQAN 371
Q LNP N + N T + ++ P A+
Sbjct: 373 NKNLQ---LNPDISSNNVINPLETSETRSFISHLPTLAH 408
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 273
RR +A H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 305 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 364
Query: 274 VMWM 277
+ M
Sbjct: 365 FLSM 368
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 273
RR +A + H+L+ER RR++I E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 303 ARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362
Query: 274 VMWM 277
+ M
Sbjct: 363 FLSM 366
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 273
RR +A + H+L+ER RR++I+E+M LQ+L+P CN+ T KA MLDE I Y++SLQ Q++
Sbjct: 193 ARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVE 252
Query: 274 VMWM 277
+ M
Sbjct: 253 FLSM 256
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 30/196 (15%)
Query: 113 SHCGSNQVAYDLDMSRAS-------SSGLNDDVRKVISPS-ERGKTETIEPTVTSSSGGS 164
S G NQ D D++ A+ S L+ V + IS + +R + E+ + S+ G S
Sbjct: 36 SFVGPNQFG-DADLTTAANGDPARMSHALSQAVIEGISGAWKRREDESKSAKIVSTIGAS 94
Query: 165 GSSFNRTSKQSTGDNSLKRKSRDAV-DSECQSEAAGFESGAGNKTAQRSGS-----CRRS 218
G+N KR+ D V D + ++E+ G E+ + + + RR
Sbjct: 95 -----------EGEN--KRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRG 141
Query: 219 RAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQVMWM 277
+A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 142 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 201
Query: 278 G-SGMAPLMFPGMQHY 292
+ M PG++ +
Sbjct: 202 KLEAVNSRMNPGIEVF 217
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 273
RR +A + H+++ER RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y++SLQ Q++
Sbjct: 174 ARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIE 233
Query: 274 VMWM 277
+ M
Sbjct: 234 FLSM 237
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 273
RR +A + H+L+ER RR++I+EKM ALQ++IP CNK KA +LDE I Y++SLQ Q++
Sbjct: 155 ARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVE 214
Query: 274 VMWM 277
+ M
Sbjct: 215 FLSM 218
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 273
RR A + H+L+ER RR++I++KM+ LQ+++P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 143 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 202
Query: 274 VMWM 277
+ M
Sbjct: 203 FLSM 206
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 82/146 (56%), Gaps = 18/146 (12%)
Query: 155 PTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFE---------SGAG 205
P S G G F R G S KR S D VD+ C S F S
Sbjct: 81 PLGLSLDQGKGPGFLRPEG---GHGSGKRFSDDVVDNRCSSMKPVFHGQPMQQPPPSAPH 137
Query: 206 NKTAQRSG-SCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 264
T+ R RR +A + H+++ER RR+RI E++RALQEL+P NKTD+A+M+DE ++Y
Sbjct: 138 QPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDY 197
Query: 265 LKSLQLQLQVMWM----GSG-MAPLM 285
+K L+LQ++V+ M G+G +APL+
Sbjct: 198 VKFLRLQVKVLSMSRLGGAGAVAPLV 223
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 273
RR +A + H+L+ER RR++I++KM+ LQ+++P CNK T KA MLDE I Y++ LQ Q++
Sbjct: 187 ARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVE 246
Query: 274 VMWM 277
+ M
Sbjct: 247 FLSM 250
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 65/111 (58%), Gaps = 9/111 (8%)
Query: 184 KSRDAVDSECQSEAAGFESGAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQ 243
+S + +S +A G S K+ +R R A++ +L R+RR+RIN++++ LQ
Sbjct: 104 QSLSSYNSSDDEKALGLVSNTS-KSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQ 162
Query: 244 ELIPHCNKTDKASMLDEAIEYLKSLQLQLQV-----MWMGSGMAPLMFPGM 289
L+P+ K D ++ML++A+ Y+K LQLQ+++ +WM APL G+
Sbjct: 163 SLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLWM---YAPLAHNGL 210
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 73/125 (58%), Gaps = 9/125 (7%)
Query: 170 RTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQRSGSCRRSRAAEVHNLSER 229
+ + S+ N++ + + VD + S ++ E + ++ + + + A + +L R
Sbjct: 125 KKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGT-ATDPQSLYAR 183
Query: 230 RRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV-----MWMGSGMAPL 284
+RR++INE+++ LQ L+P+ K D ++ML+EA+ Y+K LQLQ+++ +WM APL
Sbjct: 184 KRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWM---YAPL 240
Query: 285 MFPGM 289
+ G+
Sbjct: 241 AYNGL 245
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 273
RR +A + H+++ER RR +INE+++ LQ+++P C KT A+MLDE I Y++SLQ Q++
Sbjct: 149 ARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVE 208
Query: 274 VMWM 277
+ M
Sbjct: 209 FLSM 212
>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
SV=1
Length = 302
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 77/123 (62%), Gaps = 15/123 (12%)
Query: 178 DNSLKRKSRDAVDSECQSEAAGFESGAGNKTA-----QRSG-----SCRRSRAAEVHNLS 227
D + KR D +D+ C S F ++ A Q+S RR +A + H+++
Sbjct: 99 DETGKRFQDDVLDNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIA 158
Query: 228 ERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWM----GSG-MA 282
ER RR+RI E++R+LQEL+P NKTD+A+M+DE ++Y+K L+LQ++V+ M G+G +A
Sbjct: 159 ERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVA 218
Query: 283 PLM 285
PL+
Sbjct: 219 PLV 221
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 273
RR +A + H+L+ER RR +INE++R LQ+++P C K A+MLDE I Y++SLQ Q++
Sbjct: 147 ARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVE 206
Query: 274 VMWM 277
+ M
Sbjct: 207 FLSM 210
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTD-KASMLDEAIEYLKSLQLQLQ 273
RR +A + H+L+ER RR++IN +M+ LQEL+P C+K A +LDE I ++++LQ Q++
Sbjct: 187 ARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVE 246
Query: 274 VMWM 277
++ M
Sbjct: 247 MLSM 250
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 273
+R +A + H+L+ER RR++INE+++ LQ+L+P C K A MLD I+Y++SLQ Q++
Sbjct: 106 AKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIE 165
Query: 274 VMWM 277
+ M
Sbjct: 166 FLSM 169
>sp|Q5XVH0|BH109_ARATH Transcription factor bHLH109 OS=Arabidopsis thaliana GN=BHLH109
PE=2 SV=1
Length = 185
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 216 RRSRAAEVHNLSERRRRDRINEKMRALQELIP-HCNKTDKASMLDEAIEYLKSLQLQLQV 274
+R R+ E + E++RR I +K+ LQ L+P HC K D AS L+ IEY+KSL+ Q+ V
Sbjct: 64 KRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLENIIEYIKSLKYQVDV 123
Query: 275 MWMGSGMAPLMFP 287
M M P+ P
Sbjct: 124 MSMAYTTTPVYTP 136
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 224 HNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQ 273
H LSE++RR+++NE+ L+ +IP +K DK S+LD+ IEYL+ LQ ++Q
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQ 455
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%)
Query: 226 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVM 275
L+ + RR+RI+E+++ LQEL+P+ K D +ML++AI Y+K LQ+Q++V+
Sbjct: 214 LAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL 263
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 273
+R A +++ER RR RI++++R LQEL+P+ +K T+ A ML+EA+EY+K LQ Q+Q
Sbjct: 186 AKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQ 245
Query: 274 VM 275
+
Sbjct: 246 EL 247
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 216 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQV 274
+R A +++ER RR RI++++R LQEL+P+ +K T+ A ML+EA+EY+K+LQ Q+Q
Sbjct: 184 KRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQE 243
Query: 275 M 275
+
Sbjct: 244 L 244
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%)
Query: 226 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVM 275
L+ + RR+RI+E+++ LQEL+P+ K D +ML++AI Y+K LQ+Q++V+
Sbjct: 208 LAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVL 257
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 215 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 273
+R A +++ER RR RI+E+MR LQEL+P+ +K T+ + MLD A++Y+K LQ Q +
Sbjct: 281 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYK 340
Query: 274 VM 275
++
Sbjct: 341 IL 342
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 203 GAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAI 262
G+ K +G R + H L+ER+RR ++NE++ AL L+P KTDKA++L++AI
Sbjct: 112 GSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAI 171
Query: 263 EYLKSLQ 269
++LK LQ
Sbjct: 172 KHLKQLQ 178
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 203 GAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAI 262
GA +G+ + A + H +SER+RR+++NE L+ L+P ++ +KAS+L E I
Sbjct: 398 GAWESCGGATGAAQEMSATKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETI 457
Query: 263 EYLKSLQLQLQ 273
YLK LQ ++Q
Sbjct: 458 AYLKELQRRVQ 468
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 203 GAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAI 262
G G K S R A+ H L+ER+RR++++EK AL L+P K DK ++LD+AI
Sbjct: 99 GRGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAI 158
Query: 263 EYLKSLQLQLQVMWMGSGMAPLMFPGMQHYMSRMGMGMGPPPLPSVTNPMHFSR-VPLVD 321
+K LQ QL+ + M + S++ P S + + F + +P ++
Sbjct: 159 SRMKQLQEQLRTLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIE 218
Query: 322 QSMSMAQAQNRAVMCQAS------VLNPV-NYQNQMQNS 353
+S R ++C+ S +LN + N+Q +++NS
Sbjct: 219 AKISQNDILIR-ILCEKSKGCMINILNTIENFQLRIENS 256
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.128 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,208,872
Number of Sequences: 539616
Number of extensions: 7382699
Number of successful extensions: 24150
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 284
Number of HSP's that attempted gapping in prelim test: 22818
Number of HSP's gapped (non-prelim): 1215
length of query: 467
length of database: 191,569,459
effective HSP length: 121
effective length of query: 346
effective length of database: 126,275,923
effective search space: 43691469358
effective search space used: 43691469358
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)