Query 012253
Match_columns 467
No_of_seqs 297 out of 1857
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 00:40:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012253.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012253hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1393 Hydroxymethylglutaryl- 100.0 1E-105 3E-110 774.4 33.4 454 2-460 5-461 (462)
2 PLN02577 hydroxymethylglutaryl 100.0 1.9E-97 4E-102 767.9 41.0 452 5-456 1-452 (459)
3 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 4.1E-96 9E-101 757.1 38.5 446 8-453 1-454 (454)
4 COG3425 PksG 3-hydroxy-3-methy 100.0 6.3E-82 1.4E-86 624.0 30.9 375 7-452 1-376 (377)
5 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 1.5E-71 3.2E-76 570.9 35.2 377 9-450 1-379 (379)
6 PF08540 HMG_CoA_synt_C: Hydro 100.0 3.8E-61 8.3E-66 467.5 19.4 270 179-453 1-282 (282)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 1.6E-51 3.5E-56 406.8 29.1 306 7-375 2-323 (323)
8 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 3.3E-51 7.1E-56 415.6 31.9 336 8-411 1-340 (345)
9 PRK04262 hypothetical protein; 100.0 3.6E-51 7.8E-56 416.1 30.4 337 7-411 1-341 (347)
10 PF01154 HMG_CoA_synt_N: Hydro 100.0 1.7E-51 3.6E-56 368.6 12.1 174 5-178 1-174 (174)
11 PRK05963 3-oxoacyl-(acyl carri 100.0 4.1E-47 9E-52 383.2 27.7 304 8-374 3-326 (326)
12 PRK12880 3-oxoacyl-(acyl carri 100.0 3.9E-45 8.5E-50 371.8 28.9 305 3-376 2-340 (353)
13 PRK12879 3-oxoacyl-(acyl carri 100.0 2.2E-44 4.8E-49 363.0 29.1 306 7-375 3-325 (325)
14 PRK09258 3-oxoacyl-(acyl carri 100.0 1.4E-44 3.1E-49 366.4 25.7 308 5-374 2-338 (338)
15 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 6.8E-44 1.5E-48 359.8 30.2 304 7-375 1-326 (326)
16 PRK07204 3-oxoacyl-(acyl carri 100.0 5.2E-44 1.1E-48 361.1 29.1 304 7-374 3-329 (329)
17 PLN02326 3-oxoacyl-[acyl-carri 100.0 8.1E-43 1.8E-47 358.6 29.0 304 7-374 46-379 (379)
18 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 1.3E-42 2.9E-47 349.1 28.6 304 7-374 1-318 (318)
19 PRK06840 hypothetical protein; 100.0 1.8E-42 4E-47 351.2 28.7 307 6-376 2-337 (339)
20 cd00830 KAS_III Ketoacyl-acyl 100.0 1.3E-42 2.8E-47 349.0 26.2 303 8-371 1-319 (320)
21 cd00831 CHS_like Chalcone and 100.0 3.6E-42 7.9E-47 352.0 22.4 305 9-372 2-361 (361)
22 PLN03169 chalcone synthase fam 100.0 4.4E-42 9.5E-47 353.6 22.7 311 5-375 18-389 (391)
23 PRK09352 3-oxoacyl-(acyl carri 100.0 4.6E-41 1E-45 337.9 29.3 306 7-375 2-319 (319)
24 PRK06816 3-oxoacyl-(acyl carri 100.0 4.4E-41 9.5E-46 345.6 27.0 315 7-375 1-378 (378)
25 cd00827 init_cond_enzymes "ini 100.0 9.6E-39 2.1E-43 321.5 28.0 304 8-371 1-323 (324)
26 PLN03171 chalcone synthase-lik 100.0 1.9E-39 4E-44 334.7 22.9 311 8-376 22-396 (399)
27 PLN03172 chalcone synthase fam 100.0 7.6E-38 1.7E-42 321.5 26.4 309 8-376 16-388 (393)
28 PLN03168 chalcone synthase; Pr 100.0 3.8E-38 8.2E-43 323.8 22.9 308 8-376 15-387 (389)
29 PLN03170 chalcone synthase; Pr 100.0 6.8E-38 1.5E-42 322.9 20.6 306 9-376 21-392 (401)
30 PLN03173 chalcone synthase; Pr 100.0 2.5E-37 5.4E-42 317.4 21.0 309 8-376 16-388 (391)
31 PRK07515 3-oxoacyl-(acyl carri 100.0 1.3E-36 2.9E-41 312.1 23.5 303 8-373 2-370 (372)
32 PLN02377 3-ketoacyl-CoA syntha 100.0 5.1E-36 1.1E-40 312.9 25.6 317 4-376 93-479 (502)
33 PLN02854 3-ketoacyl-CoA syntha 100.0 3.8E-35 8.3E-40 306.3 24.8 315 4-376 109-495 (521)
34 PLN02932 3-ketoacyl-CoA syntha 100.0 8.6E-35 1.9E-39 302.1 25.8 315 4-376 63-455 (478)
35 PLN02192 3-ketoacyl-CoA syntha 100.0 3.9E-34 8.5E-39 298.1 24.3 303 4-376 97-483 (511)
36 COG3424 BcsA Predicted naringe 100.0 6.6E-33 1.4E-37 263.7 20.7 306 10-376 3-354 (356)
37 PLN00415 3-ketoacyl-CoA syntha 100.0 3.1E-32 6.7E-37 279.8 22.3 320 4-376 55-441 (466)
38 cd00327 cond_enzymes Condensin 99.9 1.8E-26 3.9E-31 224.0 15.7 236 57-372 7-254 (254)
39 cd00825 decarbox_cond_enzymes 99.9 6.8E-23 1.5E-27 206.7 16.7 245 57-372 11-332 (332)
40 PF00195 Chal_sti_synt_N: Chal 99.9 3.3E-23 7.2E-28 195.4 10.7 167 6-177 12-226 (226)
41 PF08392 FAE1_CUT1_RppA: FAE1/ 99.7 1.5E-17 3.2E-22 161.2 14.6 170 3-178 3-208 (290)
42 PRK06147 3-oxoacyl-(acyl carri 99.7 9.9E-16 2.1E-20 155.9 22.4 297 8-375 4-343 (348)
43 PF08541 ACP_syn_III_C: 3-Oxoa 99.7 8.5E-17 1.8E-21 131.6 7.8 89 236-374 2-90 (90)
44 TIGR02845 spore_V_AD stage V s 99.6 2.1E-14 4.5E-19 141.2 20.2 182 54-266 47-242 (327)
45 PRK08304 stage V sporulation p 99.5 4.1E-13 8.9E-18 132.4 19.8 182 54-266 53-248 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.4 1.2E-11 2.6E-16 128.4 22.2 116 56-177 70-242 (406)
47 cd00829 SCP-x_thiolase Thiolas 99.4 1.1E-10 2.3E-15 120.3 23.7 106 42-153 2-107 (375)
48 smart00825 PKS_KS Beta-ketoacy 99.4 2.9E-11 6.3E-16 126.4 18.8 114 57-176 87-245 (424)
49 PRK06064 acetyl-CoA acetyltran 99.4 1.8E-10 3.8E-15 119.3 24.0 107 40-152 6-114 (389)
50 PRK12404 stage V sporulation p 99.3 3E-10 6.6E-15 111.6 19.1 181 54-266 51-246 (334)
51 cd00751 thiolase Thiolase are 99.3 1.7E-11 3.8E-16 126.7 10.9 96 54-153 19-114 (386)
52 TIGR01930 AcCoA-C-Actrans acet 99.2 4.4E-11 9.6E-16 123.6 11.3 96 54-153 18-113 (386)
53 PRK12578 acetyl-CoA acetyltran 99.2 9.3E-11 2E-15 121.2 12.7 108 40-153 5-112 (385)
54 PRK08313 acetyl-CoA acetyltran 99.2 1.1E-10 2.4E-15 120.6 11.7 109 39-153 6-116 (386)
55 PF08545 ACP_syn_III: 3-Oxoacy 99.2 2.5E-11 5.4E-16 97.0 5.1 61 115-177 1-65 (80)
56 PRK05656 acetyl-CoA acetyltran 99.2 1.6E-10 3.4E-15 119.7 12.4 111 40-154 6-119 (393)
57 PRK06501 3-oxoacyl-(acyl carri 99.2 1.1E-08 2.3E-13 107.2 26.3 227 7-261 11-325 (425)
58 PF02797 Chal_sti_synt_C: Chal 99.2 1.1E-10 2.4E-15 104.3 9.7 105 219-375 40-150 (151)
59 cd00833 PKS polyketide synthas 99.2 4E-10 8.6E-15 117.6 15.5 114 57-176 87-245 (421)
60 PRK08235 acetyl-CoA acetyltran 99.1 2.5E-10 5.4E-15 118.2 12.0 97 53-153 22-118 (393)
61 PRK09051 beta-ketothiolase; Pr 99.1 3.5E-10 7.6E-15 117.1 11.5 97 53-153 23-120 (394)
62 cd00828 elong_cond_enzymes "el 99.1 4.4E-09 9.6E-14 109.4 19.5 116 56-176 71-241 (407)
63 PRK06059 lipid-transfer protei 99.1 4.7E-10 1E-14 116.5 12.1 107 40-153 8-115 (399)
64 PRK06205 acetyl-CoA acetyltran 99.1 3E-10 6.5E-15 118.1 10.6 96 54-153 23-118 (404)
65 PRK07108 acetyl-CoA acetyltran 99.1 3.7E-10 8E-15 116.8 11.0 98 53-154 23-121 (392)
66 TIGR03150 fabF beta-ketoacyl-a 99.1 7.9E-09 1.7E-13 107.5 21.0 114 57-176 71-241 (407)
67 PRK05790 putative acyltransfer 99.1 7.7E-10 1.7E-14 114.7 12.3 110 40-153 6-118 (393)
68 PRK09052 acetyl-CoA acetyltran 99.1 6.6E-10 1.4E-14 115.2 11.6 96 54-153 28-125 (399)
69 PRK08170 acetyl-CoA acetyltran 99.1 1.2E-09 2.7E-14 114.2 12.4 96 54-153 24-119 (426)
70 PRK08242 acetyl-CoA acetyltran 99.1 9.9E-10 2.1E-14 113.7 11.5 97 53-153 24-121 (402)
71 PRK06065 acetyl-CoA acetyltran 99.0 1.9E-09 4.1E-14 111.5 11.9 107 39-152 12-120 (392)
72 cd00826 nondecarbox_cond_enzym 99.0 1.9E-09 4E-14 111.7 10.9 95 54-153 20-115 (393)
73 PRK06954 acetyl-CoA acetyltran 99.0 3.4E-09 7.3E-14 110.0 11.7 96 53-153 27-123 (397)
74 PRK06158 thiolase; Provisional 99.0 4.2E-09 9E-14 108.9 11.6 101 39-149 11-111 (384)
75 PRK07103 polyketide beta-ketoa 99.0 3.9E-08 8.5E-13 102.6 18.9 90 57-152 80-196 (410)
76 PRK06289 acetyl-CoA acetyltran 98.9 6.1E-09 1.3E-13 108.4 11.5 94 53-153 22-120 (403)
77 PRK07516 acetyl-CoA acetyltran 98.9 8E-09 1.7E-13 107.0 12.4 109 39-153 5-115 (389)
78 PF00108 Thiolase_N: Thiolase, 98.9 7.3E-09 1.6E-13 101.6 10.6 97 53-153 22-118 (264)
79 PRK07314 3-oxoacyl-(acyl carri 98.9 1.1E-07 2.3E-12 99.3 18.8 163 7-176 2-242 (411)
80 PRK05952 3-oxoacyl-(acyl carri 98.9 5.1E-07 1.1E-11 93.1 23.3 223 7-261 2-290 (381)
81 PRK08722 3-oxoacyl-(acyl carri 98.8 3.4E-07 7.4E-12 95.6 21.4 227 7-261 4-314 (414)
82 PLN02287 3-ketoacyl-CoA thiola 98.8 1.8E-08 3.9E-13 105.9 11.4 97 53-153 67-164 (452)
83 PRK06333 3-oxoacyl-(acyl carri 98.8 2.3E-07 5E-12 97.2 19.1 177 57-260 82-323 (424)
84 PRK07851 acetyl-CoA acetyltran 98.8 3E-08 6.5E-13 103.2 12.1 109 40-153 6-120 (406)
85 PRK07661 acetyl-CoA acetyltran 98.8 2.5E-08 5.4E-13 103.2 11.1 96 54-153 24-120 (391)
86 PLN02836 3-oxoacyl-[acyl-carri 98.8 2.5E-07 5.4E-12 97.3 18.8 177 57-260 93-334 (437)
87 PRK09185 3-oxoacyl-(acyl carri 98.8 4.5E-07 9.9E-12 94.0 20.5 136 95-259 138-294 (392)
88 PTZ00050 3-oxoacyl-acyl carrie 98.8 3.2E-07 6.9E-12 96.1 19.5 90 57-152 77-197 (421)
89 PRK08439 3-oxoacyl-(acyl carri 98.8 4E-07 8.6E-12 94.9 19.1 163 7-176 2-242 (406)
90 PRK06445 acetyl-CoA acetyltran 98.8 2.8E-08 6.1E-13 103.0 9.8 94 54-153 29-125 (394)
91 PRK08256 lipid-transfer protei 98.8 4E-08 8.6E-13 101.9 10.9 106 40-153 5-110 (391)
92 PRK06157 acetyl-CoA acetyltran 98.8 6.2E-08 1.3E-12 100.6 12.1 109 39-153 10-118 (398)
93 PRK08963 fadI 3-ketoacyl-CoA t 98.7 6.9E-08 1.5E-12 101.2 11.1 97 53-153 25-121 (428)
94 PRK09116 3-oxoacyl-(acyl carri 98.7 2E-06 4.2E-11 89.7 20.9 162 7-176 2-243 (405)
95 PRK06366 acetyl-CoA acetyltran 98.7 1.3E-07 2.9E-12 97.8 12.0 95 55-153 24-118 (388)
96 cd00832 CLF Chain-length facto 98.7 7.1E-07 1.5E-11 92.8 17.4 113 57-176 71-239 (399)
97 PRK06365 acetyl-CoA acetyltran 98.7 1.6E-07 3.4E-12 98.4 11.7 109 39-152 19-128 (430)
98 PRK08131 acetyl-CoA acetyltran 98.6 1.8E-07 3.8E-12 97.2 11.0 96 54-153 23-119 (401)
99 PLN02644 acetyl-CoA C-acetyltr 98.6 2.9E-07 6.2E-12 95.5 12.4 96 54-153 22-117 (394)
100 PRK07850 acetyl-CoA acetyltran 98.6 2.4E-07 5.1E-12 95.9 11.0 97 54-154 23-120 (387)
101 PRK13359 beta-ketoadipyl CoA t 98.6 2.9E-07 6.3E-12 95.5 10.9 96 54-153 23-120 (400)
102 PRK06633 acetyl-CoA acetyltran 98.6 1.8E-07 3.9E-12 96.8 9.3 97 54-154 24-120 (392)
103 TIGR02446 FadI fatty oxidation 98.6 2.2E-07 4.8E-12 97.3 9.9 112 39-154 10-124 (430)
104 PRK09050 beta-ketoadipyl CoA t 98.6 2.8E-07 6E-12 95.7 10.6 97 54-154 23-121 (401)
105 PTZ00455 3-ketoacyl-CoA thiola 98.5 4.7E-07 1E-11 95.0 11.6 98 54-153 45-150 (438)
106 PRK07967 3-oxoacyl-(acyl carri 98.5 2.5E-06 5.5E-11 88.8 16.9 163 7-176 2-242 (406)
107 PLN02787 3-oxoacyl-[acyl-carri 98.5 3E-06 6.5E-11 91.0 17.8 226 7-260 129-440 (540)
108 TIGR02430 pcaF beta-ketoadipyl 98.5 6.7E-07 1.4E-11 92.8 11.8 97 54-154 22-120 (400)
109 PRK06504 acetyl-CoA acetyltran 98.5 6.8E-07 1.5E-11 92.5 11.1 96 54-153 23-119 (390)
110 PRK06519 3-oxoacyl-(acyl carri 98.5 4.1E-06 8.8E-11 86.9 16.0 166 4-177 3-254 (398)
111 PRK08142 acetyl-CoA acetyltran 98.5 9.6E-07 2.1E-11 91.3 11.0 104 39-152 8-111 (388)
112 PRK07801 acetyl-CoA acetyltran 98.5 1E-06 2.2E-11 91.2 11.2 110 40-153 6-119 (382)
113 PRK08947 fadA 3-ketoacyl-CoA t 98.4 7.9E-07 1.7E-11 92.0 10.1 96 54-153 24-121 (387)
114 PRK07910 3-oxoacyl-(acyl carri 98.4 1.6E-05 3.4E-10 83.3 19.8 161 7-176 12-252 (418)
115 PRK14691 3-oxoacyl-(acyl carri 98.4 1.1E-05 2.4E-10 82.1 18.1 113 57-176 4-172 (342)
116 PRK09268 acetyl-CoA acetyltran 98.4 1.6E-06 3.6E-11 90.7 12.2 96 54-153 28-123 (427)
117 TIGR02445 fadA fatty oxidation 98.4 1.2E-06 2.6E-11 90.6 8.9 96 54-153 22-119 (385)
118 PRK08257 acetyl-CoA acetyltran 98.3 3.9E-06 8.5E-11 89.5 12.4 108 40-153 8-119 (498)
119 PRK07855 lipid-transfer protei 98.3 3.6E-06 7.8E-11 87.1 11.7 102 39-150 7-108 (386)
120 PRK06066 acetyl-CoA acetyltran 98.3 6.4E-06 1.4E-10 85.0 11.8 105 40-152 8-114 (385)
121 PF00109 ketoacyl-synt: Beta-k 98.2 6E-06 1.3E-10 80.1 10.3 113 57-175 87-250 (254)
122 PF07451 SpoVAD: Stage V sporu 98.2 0.00033 7.1E-09 68.5 20.0 178 57-266 51-243 (329)
123 PRK06025 acetyl-CoA acetyltran 98.2 1.3E-05 2.9E-10 83.1 11.1 96 54-153 26-122 (417)
124 PRK06690 acetyl-CoA acetyltran 98.0 3.1E-05 6.7E-10 79.3 10.0 91 54-153 22-112 (361)
125 TIGR02813 omega_3_PfaA polyket 98.0 0.00028 6.2E-09 87.5 19.6 137 96-261 185-351 (2582)
126 PRK07937 lipid-transfer protei 98.0 4.8E-05 1E-09 77.7 11.0 107 39-152 5-112 (352)
127 KOG1406 Peroxisomal 3-ketoacyl 97.8 5.2E-05 1.1E-09 72.2 6.9 109 37-153 7-117 (408)
128 COG0304 FabB 3-oxoacyl-(acyl-c 97.7 0.00048 1E-08 71.5 13.0 180 56-262 70-313 (412)
129 COG0183 PaaJ Acetyl-CoA acetyl 97.2 0.0013 2.9E-08 68.2 9.0 94 56-153 26-122 (392)
130 COG3321 Polyketide synthase mo 96.8 0.017 3.6E-07 67.3 14.3 173 60-261 94-319 (1061)
131 PF13723 Ketoacyl-synt_2: Beta 96.1 0.067 1.5E-06 50.9 11.3 116 56-178 33-172 (218)
132 KOG1391 Acetyl-CoA acetyltrans 96.1 0.0076 1.6E-07 57.6 4.7 96 54-154 25-122 (396)
133 KOG1394 3-oxoacyl-(acyl-carrie 95.8 0.03 6.5E-07 56.0 7.6 228 6-262 23-338 (440)
134 KOG1390 Acetyl-CoA acetyltrans 95.6 0.035 7.5E-07 54.8 7.1 96 54-153 27-122 (396)
135 PRK06025 acetyl-CoA acetyltran 95.4 0.044 9.5E-07 57.2 7.4 84 236-366 326-409 (417)
136 KOG1392 Acetyl-CoA acetyltrans 95.0 0.016 3.5E-07 56.1 2.6 89 56-149 65-153 (465)
137 PRK07850 acetyl-CoA acetyltran 94.2 0.56 1.2E-05 48.7 12.0 126 22-175 252-386 (387)
138 PRK13359 beta-ketoadipyl CoA t 93.5 0.7 1.5E-05 48.2 11.2 127 22-175 263-399 (400)
139 PF08541 ACP_syn_III_C: 3-Oxoa 93.5 0.14 3.1E-06 41.2 4.9 73 69-151 1-78 (90)
140 TIGR02430 pcaF beta-ketoadipyl 93.1 0.65 1.4E-05 48.4 10.2 75 22-106 263-338 (400)
141 PRK06205 acetyl-CoA acetyltran 92.8 0.66 1.4E-05 48.4 9.9 76 22-106 265-340 (404)
142 cd00751 thiolase Thiolase are 92.7 0.86 1.9E-05 47.2 10.5 96 60-174 286-385 (386)
143 KOG1202 Animal-type fatty acid 92.5 0.86 1.9E-05 52.4 10.5 178 57-259 87-310 (2376)
144 KOG1389 3-oxoacyl CoA thiolase 92.5 0.29 6.2E-06 48.3 6.1 95 54-153 58-153 (435)
145 PRK08242 acetyl-CoA acetyltran 92.4 0.97 2.1E-05 47.2 10.4 129 22-175 267-401 (402)
146 PRK06366 acetyl-CoA acetyltran 92.1 0.87 1.9E-05 47.3 9.7 115 22-149 252-372 (388)
147 PRK09051 beta-ketothiolase; Pr 91.7 1.4 3E-05 45.9 10.6 75 22-106 259-334 (394)
148 PRK09050 beta-ketoadipyl CoA t 91.6 1.5 3.2E-05 45.8 10.8 74 23-106 265-339 (401)
149 PRK06147 3-oxoacyl-(acyl carri 91.2 0.68 1.5E-05 47.3 7.6 90 61-152 236-331 (348)
150 PRK07661 acetyl-CoA acetyltran 91.1 1.2 2.6E-05 46.3 9.4 129 23-175 257-390 (391)
151 PRK08963 fadI 3-ketoacyl-CoA t 91.0 1.7 3.7E-05 45.7 10.6 61 22-85 275-335 (428)
152 PRK09052 acetyl-CoA acetyltran 90.7 1.6 3.5E-05 45.5 10.0 74 23-106 265-339 (399)
153 PRK05790 putative acyltransfer 90.6 2.4 5.2E-05 44.0 11.1 75 22-106 258-333 (393)
154 TIGR02445 fadA fatty oxidation 90.5 2.9 6.3E-05 43.3 11.6 41 61-106 282-322 (385)
155 TIGR01930 AcCoA-C-Actrans acet 90.3 2.2 4.8E-05 44.2 10.6 60 22-85 253-312 (386)
156 PF02803 Thiolase_C: Thiolase, 90.1 1.6 3.6E-05 37.6 7.9 95 60-174 23-122 (123)
157 PRK05656 acetyl-CoA acetyltran 90.0 2.6 5.7E-05 43.8 10.9 75 22-106 258-333 (393)
158 TIGR00748 HMG_CoA_syn_Arc hydr 89.5 0.93 2E-05 46.2 6.9 83 56-149 205-293 (345)
159 PLN02644 acetyl-CoA C-acetyltr 89.3 2.6 5.7E-05 43.8 10.3 74 23-106 259-333 (394)
160 PRK08235 acetyl-CoA acetyltran 88.2 2.8 6E-05 43.6 9.4 75 23-106 259-333 (393)
161 PLN02287 3-ketoacyl-CoA thiola 87.9 3.8 8.2E-05 43.5 10.4 100 61-178 333-437 (452)
162 PRK06690 acetyl-CoA acetyltran 87.9 1.9 4.1E-05 44.3 7.9 30 236-265 269-298 (361)
163 PRK07851 acetyl-CoA acetyltran 87.6 2.3 5.1E-05 44.4 8.6 57 23-84 271-328 (406)
164 PRK08256 lipid-transfer protei 86.7 4.8 0.0001 41.7 10.3 30 237-266 276-305 (391)
165 PRK06816 3-oxoacyl-(acyl carri 86.6 2.4 5.3E-05 43.7 8.0 88 58-154 271-367 (378)
166 PRK06504 acetyl-CoA acetyltran 86.1 8.2 0.00018 40.1 11.5 45 57-106 286-330 (390)
167 PRK08947 fadA 3-ketoacyl-CoA t 85.2 8.6 0.00019 39.9 11.2 41 61-106 284-324 (387)
168 PRK06445 acetyl-CoA acetyltran 85.2 8.8 0.00019 39.9 11.3 29 237-265 304-332 (394)
169 PRK07108 acetyl-CoA acetyltran 85.0 3.2 7E-05 43.1 8.0 58 23-84 258-315 (392)
170 PRK12879 3-oxoacyl-(acyl carri 84.5 3 6.5E-05 41.8 7.3 80 61-150 227-311 (325)
171 CHL00203 fabH 3-oxoacyl-acyl-c 84.3 3 6.5E-05 42.0 7.2 80 60-149 227-311 (326)
172 PRK07204 3-oxoacyl-(acyl carri 84.2 3.3 7.1E-05 41.6 7.5 82 60-149 231-315 (329)
173 cd00327 cond_enzymes Condensin 84.2 11 0.00023 36.0 10.8 94 57-150 143-243 (254)
174 PRK06633 acetyl-CoA acetyltran 83.8 5.4 0.00012 41.5 8.9 58 22-84 257-315 (392)
175 PRK09268 acetyl-CoA acetyltran 83.7 8.1 0.00018 40.7 10.3 63 22-85 272-335 (427)
176 PRK08257 acetyl-CoA acetyltran 83.7 4.2 9E-05 43.7 8.3 119 22-149 250-382 (498)
177 cd00825 decarbox_cond_enzymes 83.1 9.5 0.00021 38.0 10.3 78 58-138 204-286 (332)
178 PRK09258 3-oxoacyl-(acyl carri 82.9 4.8 0.0001 40.6 8.0 83 58-150 238-325 (338)
179 PRK06954 acetyl-CoA acetyltran 82.2 7.6 0.00016 40.4 9.3 58 23-84 263-320 (397)
180 PRK07910 3-oxoacyl-(acyl carri 81.2 9 0.00019 40.2 9.5 82 23-106 249-333 (418)
181 PRK06840 hypothetical protein; 81.2 6.9 0.00015 39.5 8.5 81 60-150 238-322 (339)
182 COG3425 PksG 3-hydroxy-3-methy 80.6 4.1 9E-05 41.7 6.4 98 55-174 205-307 (377)
183 PRK04262 hypothetical protein; 80.4 4.2 9.2E-05 41.4 6.6 82 57-149 207-294 (347)
184 PRK07515 3-oxoacyl-(acyl carri 80.1 3.9 8.4E-05 42.0 6.3 83 57-149 269-357 (372)
185 PRK14691 3-oxoacyl-(acyl carri 79.7 12 0.00026 38.1 9.6 48 58-106 205-253 (342)
186 PRK08131 acetyl-CoA acetyltran 79.1 10 0.00022 39.6 9.0 58 22-84 263-321 (401)
187 PLN02326 3-oxoacyl-[acyl-carri 78.8 8.1 0.00017 39.9 8.2 80 60-149 281-365 (379)
188 PRK05963 3-oxoacyl-(acyl carri 78.5 5.3 0.00011 40.1 6.6 85 58-150 226-313 (326)
189 PF02801 Ketoacyl-synt_C: Beta 78.1 2.9 6.3E-05 35.5 3.9 77 62-139 28-111 (119)
190 PRK07314 3-oxoacyl-(acyl carri 77.5 8.5 0.00019 40.0 8.0 77 61-139 278-360 (411)
191 cd00830 KAS_III Ketoacyl-acyl 76.6 7.4 0.00016 38.7 7.0 85 58-150 222-309 (320)
192 PRK12578 acetyl-CoA acetyltran 75.9 9 0.0002 39.6 7.6 80 22-106 217-299 (385)
193 PRK07937 lipid-transfer protei 75.6 26 0.00056 35.9 10.7 79 22-108 212-291 (352)
194 TIGR02446 FadI fatty oxidation 74.4 20 0.00043 37.8 9.8 60 22-85 277-337 (430)
195 PRK06066 acetyl-CoA acetyltran 74.4 13 0.00028 38.5 8.2 77 22-106 218-300 (385)
196 PRK06059 lipid-transfer protei 73.2 32 0.0007 35.7 10.9 40 62-106 276-315 (399)
197 TIGR00747 fabH 3-oxoacyl-(acyl 72.7 11 0.00023 37.6 7.0 83 58-150 218-305 (318)
198 TIGR01835 HMG-CoA-S_prok 3-hyd 72.7 6.7 0.00015 40.5 5.6 97 59-175 205-315 (379)
199 PRK09352 3-oxoacyl-(acyl carri 72.5 9.3 0.0002 38.1 6.5 82 61-150 221-305 (319)
200 PRK08170 acetyl-CoA acetyltran 71.7 23 0.0005 37.2 9.5 24 61-84 309-332 (426)
201 COG0304 FabB 3-oxoacyl-(acyl-c 71.3 12 0.00027 39.1 7.2 112 22-138 238-357 (412)
202 PRK06289 acetyl-CoA acetyltran 69.9 17 0.00036 37.9 7.9 41 61-106 278-318 (403)
203 PRK09116 3-oxoacyl-(acyl carri 69.7 24 0.00052 36.8 9.0 46 60-106 276-322 (405)
204 PRK08722 3-oxoacyl-(acyl carri 69.5 14 0.0003 38.7 7.2 59 59-118 278-337 (414)
205 PF02801 Ketoacyl-synt_C: Beta 69.4 16 0.00035 30.9 6.4 25 239-263 39-63 (119)
206 PLN02787 3-oxoacyl-[acyl-carri 69.2 9.8 0.00021 41.3 6.1 45 61-106 407-452 (540)
207 PRK06157 acetyl-CoA acetyltran 69.1 25 0.00054 36.6 9.0 79 22-106 224-310 (398)
208 cd00828 elong_cond_enzymes "el 67.8 30 0.00065 35.8 9.3 79 58-138 273-357 (407)
209 KOG1389 3-oxoacyl CoA thiolase 65.4 14 0.0003 36.9 5.6 29 237-265 332-360 (435)
210 PRK08313 acetyl-CoA acetyltran 65.2 37 0.00081 35.1 9.3 80 22-106 216-299 (386)
211 PRK06519 3-oxoacyl-(acyl carri 64.6 17 0.00038 37.8 6.7 71 60-136 281-353 (398)
212 PRK08142 acetyl-CoA acetyltran 63.3 11 0.00023 39.3 4.8 79 22-106 218-297 (388)
213 PRK06064 acetyl-CoA acetyltran 62.4 34 0.00073 35.4 8.4 79 22-106 219-300 (389)
214 cd00834 KAS_I_II Beta-ketoacyl 62.4 40 0.00088 34.6 9.0 80 59-140 275-360 (406)
215 cd00832 CLF Chain-length facto 61.4 57 0.0012 33.9 9.9 78 58-139 269-352 (399)
216 cd00826 nondecarbox_cond_enzym 60.8 26 0.00057 36.4 7.2 30 237-266 281-310 (393)
217 PLN02836 3-oxoacyl-[acyl-carri 59.3 60 0.0013 34.2 9.8 47 59-106 299-346 (437)
218 cd00829 SCP-x_thiolase Thiolas 59.3 47 0.001 33.9 8.8 43 59-106 251-293 (375)
219 TIGR03150 fabF beta-ketoacyl-a 58.8 21 0.00046 36.8 6.2 45 61-106 277-322 (407)
220 PRK09185 3-oxoacyl-(acyl carri 58.6 32 0.0007 35.6 7.5 77 61-140 262-342 (392)
221 PRK05952 3-oxoacyl-(acyl carri 58.3 45 0.00098 34.5 8.4 46 59-105 254-300 (381)
222 PRK06365 acetyl-CoA acetyltran 58.0 49 0.0011 34.8 8.8 41 61-106 295-337 (430)
223 cd00831 CHS_like Chalcone and 57.7 19 0.00042 36.6 5.6 83 58-149 258-349 (361)
224 PTZ00455 3-ketoacyl-CoA thiola 57.6 15 0.00033 38.7 4.9 79 22-106 266-351 (438)
225 PF02803 Thiolase_C: Thiolase, 57.5 62 0.0014 27.8 7.8 27 239-265 36-62 (123)
226 PRK06158 thiolase; Provisional 57.4 17 0.00036 37.7 5.1 78 22-106 216-296 (384)
227 PRK09604 UGMP family protein; 57.3 38 0.00082 34.3 7.5 33 57-89 51-83 (332)
228 COG0332 FabH 3-oxoacyl-[acyl-c 56.8 18 0.00039 36.6 5.0 84 56-149 220-308 (323)
229 PRK06333 3-oxoacyl-(acyl carri 56.6 27 0.00059 36.4 6.6 46 59-105 288-334 (424)
230 PTZ00050 3-oxoacyl-acyl carrie 55.5 39 0.00084 35.4 7.5 47 59-106 283-331 (421)
231 cd00833 PKS polyketide synthas 54.9 91 0.002 32.1 10.2 82 58-140 278-367 (421)
232 PRK07516 acetyl-CoA acetyltran 54.9 58 0.0013 33.7 8.6 43 59-106 260-302 (389)
233 PRK07855 lipid-transfer protei 52.9 20 0.00043 37.2 4.7 80 22-107 223-309 (386)
234 smart00825 PKS_KS Beta-ketoacy 46.8 79 0.0017 32.8 8.2 48 58-106 278-326 (424)
235 PRK06065 acetyl-CoA acetyltran 46.5 41 0.00089 35.0 5.9 79 22-106 224-306 (392)
236 TIGR00329 gcp_kae1 metallohydr 45.8 72 0.0016 31.8 7.4 60 57-118 48-107 (305)
237 KOG1406 Peroxisomal 3-ketoacyl 44.0 53 0.0011 32.1 5.6 65 58-127 271-336 (408)
238 PRK07103 polyketide beta-ketoa 43.6 40 0.00086 35.2 5.3 29 62-90 284-313 (410)
239 PF01135 PCMT: Protein-L-isoas 43.3 16 0.00036 34.4 2.2 44 327-371 48-91 (209)
240 PRK08304 stage V sporulation p 43.0 1.4E+02 0.0031 30.3 8.8 88 58-153 204-312 (337)
241 PRK07801 acetyl-CoA acetyltran 41.2 1E+02 0.0022 31.8 7.8 85 236-369 291-376 (382)
242 PF07736 CM_1: Chorismate muta 40.9 39 0.00085 28.9 3.8 47 65-118 26-75 (118)
243 KOG1394 3-oxoacyl-(acyl-carrie 40.6 33 0.00073 35.0 3.9 83 22-106 261-348 (440)
244 TIGR03723 bact_gcp putative gl 39.4 1E+02 0.0022 31.0 7.3 60 57-118 49-108 (314)
245 cd00827 init_cond_enzymes "ini 37.7 1E+02 0.0022 30.5 7.0 86 56-150 220-313 (324)
246 PRK06501 3-oxoacyl-(acyl carri 37.0 51 0.0011 34.5 4.9 45 61-106 291-336 (425)
247 cd01458 vWA_ku Ku70/Ku80 N-ter 34.1 2.5E+02 0.0054 26.2 8.7 96 55-151 23-136 (218)
248 PLN03172 chalcone synthase fam 33.7 1.9E+02 0.0042 30.0 8.5 35 215-252 96-131 (393)
249 COG1214 Inactive homolog of me 32.9 80 0.0017 30.0 5.1 63 54-118 34-96 (220)
250 KOG1390 Acetyl-CoA acetyltrans 32.2 1E+02 0.0022 31.2 5.6 82 236-369 305-391 (396)
251 TIGR01796 CM_mono_aroH monofun 32.1 74 0.0016 27.1 4.1 50 65-119 26-76 (117)
252 PRK12880 3-oxoacyl-(acyl carri 31.0 1.4E+02 0.0031 30.3 7.0 44 58-106 241-284 (353)
253 PLN03169 chalcone synthase fam 30.4 1.4E+02 0.003 30.9 6.8 80 62-149 284-374 (391)
254 PRK14878 UGMP family protein; 29.5 1.7E+02 0.0037 29.5 7.1 28 60-87 47-74 (323)
255 PLN03173 chalcone synthase; Pr 28.3 2.9E+02 0.0062 28.7 8.7 35 215-252 96-131 (391)
256 PLN03168 chalcone synthase; Pr 27.7 2.7E+02 0.0059 28.8 8.4 36 215-253 95-131 (389)
257 cd01452 VWA_26S_proteasome_sub 27.4 1.5E+02 0.0033 27.4 5.8 86 57-153 25-119 (187)
258 PF05378 Hydant_A_N: Hydantoin 26.7 70 0.0015 29.2 3.4 38 50-87 28-65 (176)
259 TIGR02813 omega_3_PfaA polyket 26.2 1.4E+02 0.003 38.9 6.9 79 61-140 317-403 (2582)
260 cd02185 AroH Chorismate mutase 26.1 1.2E+02 0.0025 26.0 4.3 51 65-119 26-76 (117)
261 TIGR03725 bact_YeaZ universal 25.7 90 0.002 29.0 4.0 35 55-89 31-65 (202)
262 PRK13410 molecular chaperone D 24.1 1.3E+02 0.0029 33.6 5.6 70 56-131 306-375 (668)
263 PF07451 SpoVAD: Stage V sporu 23.8 1.6E+02 0.0035 29.6 5.4 88 58-153 199-307 (329)
264 cd01453 vWA_transcription_fact 23.7 3.4E+02 0.0074 24.6 7.5 89 56-152 24-117 (183)
265 cd01461 vWA_interalpha_trypsin 23.7 2.8E+02 0.006 24.1 6.7 88 57-153 19-110 (171)
266 cd01467 vWA_BatA_type VWA BatA 23.4 5.1E+02 0.011 22.8 8.6 89 56-153 24-113 (180)
267 PLN03171 chalcone synthase-lik 23.4 2.7E+02 0.0059 28.9 7.5 87 55-149 275-380 (399)
268 cd01480 vWA_collagen_alpha_1-V 23.1 3.9E+02 0.0084 24.1 7.7 87 59-153 21-120 (186)
269 PF01890 CbiG_C: Cobalamin syn 23.0 82 0.0018 26.9 2.9 39 40-85 3-41 (121)
270 cd01817 RGS12_RBD Ubiquitin do 22.4 1.6E+02 0.0035 22.9 4.1 44 45-92 10-53 (73)
271 PLN02377 3-ketoacyl-CoA syntha 22.1 4E+02 0.0086 28.8 8.5 30 236-265 185-218 (502)
272 cd00248 Mth938-like Mth938-lik 21.7 1.2E+02 0.0027 25.3 3.7 58 57-124 36-94 (109)
273 KOG2708 Predicted metalloprote 21.5 1.2E+02 0.0026 29.1 3.9 47 59-106 51-98 (336)
274 PTZ00186 heat shock 70 kDa pre 21.2 2E+02 0.0043 32.2 6.2 69 57-132 332-401 (657)
275 PLN00415 3-ketoacyl-CoA syntha 21.0 5.9E+02 0.013 27.2 9.3 16 236-251 147-162 (466)
276 PF00814 Peptidase_M22: Glycop 20.7 77 0.0017 31.0 2.6 30 58-87 30-59 (268)
277 PRK13411 molecular chaperone D 20.6 1.5E+02 0.0033 33.0 5.2 69 57-131 306-375 (653)
278 COG1504 Uncharacterized conser 20.5 1.2E+02 0.0026 25.6 3.3 31 19-49 45-75 (121)
279 TIGR03566 FMN_reduc_MsuE FMN r 20.2 3.5E+02 0.0076 24.2 6.7 54 94-150 56-109 (174)
No 1
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-105 Score=774.35 Aligned_cols=454 Identities=58% Similarity=0.932 Sum_probs=421.2
Q ss_pred CCCCCceeEEeEEEEecCCceeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCE
Q 012253 2 TSWHPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGR 81 (467)
Q Consensus 2 ~~~~~~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~ 81 (467)
++.+|.+|||.+|.+|+|.++|+|+||+++.|++.+||++|+||.+|+||.+.||+.+|+.+++++++++.+++++.|++
T Consensus 5 ~~~~p~dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGR 84 (462)
T KOG1393|consen 5 ASNWPKDVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGR 84 (462)
T ss_pred cccCccccceeEEEEEcCccccChhhHhhcCCccccceEeccCcceecccCchhhhhhhhHHHHHHHHHHhCCChhhcce
Confidence 45568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecccccCCCCC
Q 012253 82 LEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPAR 161 (467)
Q Consensus 82 Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~~~~~~ 161 (467)
|.|||||.+|.+||+++.|+++|+.+|+.+++++|..||||||++||.+|++||++..||||.|||||+|++.|..++++
T Consensus 85 LEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY~~G~aR 164 (462)
T KOG1393|consen 85 LEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVYAKGNAR 164 (462)
T ss_pred EEecceeccccchHHHHHHHHHhhhcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceeEEEecCCCCceeecccccccccCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhh--hcCC
Q 012253 162 PTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL--EGRQ 239 (467)
Q Consensus 162 ~t~GdGAvA~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~--~~~~ 239 (467)
||+|+|||||||+|++++.|+++++++||++.||||+|+..++||+|||++|++||+.|++.||..|++++... ...+
T Consensus 165 pTGGAgAVAmLIgPnApi~ferglr~thM~hayDFyKPdl~SEyPvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~ 244 (462)
T KOG1393|consen 165 PTGGAGAVAMLIGPNAPIIFERGLRATHMQHAYDFYKPDLLSEYPVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGS 244 (462)
T ss_pred CCCCcceEEEEEcCCCceEecccchhhhhhhhhhccCCCCCCcCceecCeehHHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988532 1124
Q ss_pred CCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcC
Q 012253 240 FSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQ 319 (467)
Q Consensus 240 ~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~ 319 (467)
..+++||+++||.|++||++|.+.+|+|+||..++....+.. .++ ..+..+++|+||++||++++++++.|.+|+.
T Consensus 245 ~~l~~fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~--~~~--~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~ 320 (462)
T KOG1393|consen 245 DNLNSFDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESA--GLE--STLKLDESYTDRDLEKAFIKISKPIFKKKTK 320 (462)
T ss_pred cccccCCeEEEeCchhhhHHHHHHHhhhhhhhhccccccccc--ccc--ccccccccccchHHHHHHHHHhHHHHHhhcc
Confidence 557899999999999999999999999999998766432111 111 4688899999999999999999999999999
Q ss_pred CCcccccccCccccchHHHHHHHHHhhcC-cCCCCCEEEEEEeccccceeeEEEEEecCCCCcchhhhhhcCChHHHhcc
Q 012253 320 PSTLIPKQVGNMYTASLYAAFASLLHEKH-SSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSNIVKVMDVPGKLKL 398 (467)
Q Consensus 320 ~s~~~~~~~GN~~taS~~l~L~~~l~~~~-~~~~G~~ill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 398 (467)
||+.+++++|||||+|+|.+|+++|.... ....|+||+|||||||+++++|++++..+.++ ..+.+....++.+||++
T Consensus 321 ~sl~~~~~~GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p-~~k~~~~~~d~~~rL~~ 399 (462)
T KOG1393|consen 321 PSLLAPRRNGNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATP-LDKIIASLTDLKKRLDS 399 (462)
T ss_pred ceeEeeccCCccccHHHHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCCc-hhhhhHhhhhHHHHhhh
Confidence 99999999999999999999999999732 23689999999999999999999999974444 23345567799999999
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCCccCCCCCCcCCCcEEEEeeCCCCceEEeeecCCCCcc
Q 012253 399 RHEFPPEKFVDIMKLMEHRYGAKDFVTSKDSSLLSPGTCYLTEVDSMFRRFYAKKENTSNAA 460 (467)
Q Consensus 399 r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~R~Y~~~~~~~~~~ 460 (467)
|+.++|+||++.|++||+.|++++|.|.+++++++||+|||++||++|||.|.+++.+.|+.
T Consensus 400 R~~~tPe~F~e~melre~~~~~~n~~p~gs~~~Lf~gtyYL~~vd~~~RRsY~~~~~~n~~~ 461 (462)
T KOG1393|consen 400 RKCVTPEEFTEIMELREDTHHKVNFVPQGSIESLFPGTYYLKRVDELHRRSYTLKPEPNNVT 461 (462)
T ss_pred ccccCHHHHHHHHHhhhhhcccccCCCCCchhhcCCCceehhhhhHHhhhccccCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999888764
No 2
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=1.9e-97 Score=767.88 Aligned_cols=452 Identities=82% Similarity=1.288 Sum_probs=412.2
Q ss_pred CCceeEEeEEEEecCCceeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 5 HPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 5 ~~~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
+|++|||.++++|+|+++|+++||++.+|.+++|+++||++|+|++++++||+++||++||++||+++|++|++||+||+
T Consensus 1 ~~~~vgI~gig~Y~P~~~v~n~eLa~~~g~~~~~~~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~Idlliv 80 (459)
T PLN02577 1 MPKNVGILAMEVYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEV 80 (459)
T ss_pred CCCccEEEEEEEeCCCeEEcHHHHHHHhCCCHHHHhhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecccccCCCCCCcc
Q 012253 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTG 164 (467)
Q Consensus 85 ~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~~~~~~~t~ 164 (467)
+|+|+++.+|++|++|+++++++|+++|++||+++||+||++||++|.+||+++.+|+++||||++|+++|..++.++|+
T Consensus 81 aTeT~~d~~ps~A~~v~~ll~~LG~~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~~~~e~t~ 160 (459)
T PLN02577 81 GSETVIDKSKSIKTFLMQLFEESGNTDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAEGPARPTG 160 (459)
T ss_pred EcCCCCCCCCchHHHHHHHHHHhCCCCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccCCCCCCCC
Confidence 99999999999999999888877789999999999999999999999999999977789999999999998877889999
Q ss_pred ccceeEEEecCCCCceeecccccccccCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 012253 165 GAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLD 244 (467)
Q Consensus 165 GdGAvA~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d 244 (467)
||||+||||+++|++.++....++++.+++|||||...++||.|||++|+.+|++++..+++.|+++.....+.+++++|
T Consensus 161 GdGA~A~lv~~~~~~~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d 240 (459)
T PLN02577 161 GAGAVAMLVGPNAPIVFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISD 240 (459)
T ss_pred CcceEEEEEccCCCceeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHH
Confidence 99999999999887777776788999999999999987789999999999999999999999999887533345788999
Q ss_pred cceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCccc
Q 012253 245 VDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLI 324 (467)
Q Consensus 245 ~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~ 324 (467)
||++||||||+||++|++++|+++||.+....+.+..++.+.++.+++.+++|.||+++|++..++++.|.+|++||+.+
T Consensus 241 ~d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~ 320 (459)
T PLN02577 241 ADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLI 320 (459)
T ss_pred cCEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHH
Confidence 99999999999999999999999988754321111223445556688899999999999999999999999999999999
Q ss_pred ccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEecCCCCcchhhhhhcCChHHHhcccccCCh
Q 012253 325 PKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSNIVKVMDVPGKLKLRHEFPP 404 (467)
Q Consensus 325 ~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~r~~~~~ 404 (467)
++++|||||||+|++|+++|++....++|+||+|||||||+++++|+++++++..++.+++++.+.+++++|++|++||+
T Consensus 321 ~~~vGN~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~~~~~~~~~~~~~~~~~~~~L~~R~~ls~ 400 (459)
T PLN02577 321 PKQVGNMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHEGQHPFSLSNIAKVMDVSEKLKSRHEVSP 400 (459)
T ss_pred HHhcCcccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeCCCccccHHHHHHhccHHHHHhCCccCCH
Confidence 99999999999999999999874335699999999999999999999999995333445788888999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCccCCCCCCcCCCcEEEEeeCCCCceEEeeecCC
Q 012253 405 EKFVDIMKLMEHRYGAKDFVTSKDSSLLSPGTCYLTEVDSMFRRFYAKKENT 456 (467)
Q Consensus 405 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~R~Y~~~~~~ 456 (467)
+||+++++.|+..|+..+|.|..+.+.+++|+|||++|+++|||+|++++..
T Consensus 401 ~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~i~~~~~R~Y~~~~~~ 452 (459)
T PLN02577 401 EKFVETLKLMEHRYGAKDFVPSKDVSLLAPGTYYLTEVDSLYRRFYDRKALN 452 (459)
T ss_pred HHHHHHHHHHHhhccCcCCCcCCcccccCCCceEEeEEcCCcEEEEEecCCC
Confidence 9999999999999999999999988888999999999999999999997543
No 3
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=4.1e-96 Score=757.08 Aligned_cols=446 Identities=62% Similarity=0.984 Sum_probs=406.2
Q ss_pred eeEEeEEEEecCCceeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEec
Q 012253 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (467)
Q Consensus 8 ~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Te 87 (467)
+|||.+|++|+|+++|++++|++.+|++++||++||++++|+|++++||+++||++||+++|++++++|++||+||++|+
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~g~~~~k~~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~Te 80 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTE 80 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhcCCCHHHheechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecccccCCCCCCccccc
Q 012253 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAA 167 (467)
Q Consensus 88 s~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~~~~~~~t~GdG 167 (467)
|+++.+|+++++||++|+++|+++|++||+++||+|+++||++|.+||+++.+|+++||||++|+++|.+.+.++|+|||
T Consensus 81 S~~d~sps~a~~v~~lL~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~~~~~~~t~GaG 160 (454)
T TIGR01833 81 TIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAKGNARPTGGAG 160 (454)
T ss_pred CCCCCCCchHHHHHHHHHhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccccccCCCeeeccccc
Confidence 99999999999999999988889999999999999999999999999999977789999999999999998889999999
Q ss_pred eeEEEecCCCCceeecccccccccCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhh-h----cCCCCc
Q 012253 168 AVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL-E----GRQFSM 242 (467)
Q Consensus 168 AvA~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~-~----~~~~~~ 242 (467)
|+||||+++|+++++++..++|+.+++|||||...++||.|||++|+.||+++++.+|..|.++.... . +.+..+
T Consensus 161 AvAmLv~~~~~~~~~~~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~ 240 (454)
T TIGR01833 161 AVAMLIGPNAPIVFERGLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL 240 (454)
T ss_pred eEEEEeccCccceecCccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH
Confidence 99999999998888876688999999999999876779999999999999999999999998876421 1 125778
Q ss_pred cccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCc
Q 012253 243 LDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPST 322 (467)
Q Consensus 243 ~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~ 322 (467)
+|||++|||+||+||++|++++|+++++...+..+....++++.++..++.+++|+|++++|.|.+++++.|.+|+.||+
T Consensus 241 ~dfd~~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~ 320 (454)
T TIGR01833 241 NDFDYMVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSL 320 (454)
T ss_pred hHcCEEeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchh
Confidence 99999999999999999999999988887554222222355666677899999999999999999999999999999999
Q ss_pred ccccccCccccchHHHHHHHHHhhcCc-CCCCCEEEEEEeccccceeeEEEEEecCCCCc-c-hhhhhhcCChHHHhccc
Q 012253 323 LIPKQVGNMYTASLYAAFASLLHEKHS-SLEGKRVIMFSYGSGLTATMFSLQLQEGHRPF-S-LSNIVKVMDVPGKLKLR 399 (467)
Q Consensus 323 ~~~~~~GN~~taS~~l~L~~~l~~~~~-~~~G~~ill~syGsG~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~L~~r 399 (467)
.+++++|||||||+|++|+++|++... .+.|+||+|||||||+++++|+++++++..++ . ++.+....++.++|++|
T Consensus 321 ~~~~~vGN~YtaSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~~~~~~~~~~~~~~~~~~~~~L~~R 400 (454)
T TIGR01833 321 LVPNQVGNMYTASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQDASPGSALDKLIASLSDLKNKLDSR 400 (454)
T ss_pred HHHHhcCchhhhHHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCCccccchHHHHHHHHhhHHHHHhcC
Confidence 999999999999999999999987432 56899999999999999999999999932211 0 55555666999999999
Q ss_pred ccCChHHHHHHHHHHHHhcCCCCCccCCCCCCcCCCcEEEEeeCCCCceEEeee
Q 012253 400 HEFPPEKFVDIMKLMEHRYGAKDFVTSKDSSLLSPGTCYLTEVDSMFRRFYAKK 453 (467)
Q Consensus 400 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~R~Y~~~ 453 (467)
+++|++||+++++.|++.|+.++|.|.++.+.++||+|||++|+++|||+|+++
T Consensus 401 ~~~s~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~i~~~~~R~Y~~~ 454 (454)
T TIGR01833 401 HCVAPEEFEETMELREQAHHKKNFTPQGSIDLLFPGTWYLERVDSKHRRSYARK 454 (454)
T ss_pred ccCCHHHHHHHHHhhhhhcccccccccccccccCCCcEEEeeecCCceEEeccC
Confidence 999999999999999999999999999999889999999999999999999875
No 4
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=6.3e-82 Score=624.01 Aligned_cols=375 Identities=34% Similarity=0.515 Sum_probs=348.6
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEe
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~T 86 (467)
|+|||.++++|+|.++|+++||++.+|.+++|+++|+|+..|+|++.+||++|||++||+++|+++++||++|++|+|||
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT 80 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS 80 (377)
T ss_pred CccccceEEEeccceEeeHHHHHhhcCCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceEEEec
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecccccCC-CCCCccc
Q 012253 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEG-PARPTGG 165 (467)
Q Consensus 87 es~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~~~-~~~~t~G 165 (467)
||++|.+|++|++|+++||+ +++++++|+++||++||+||++|.+||.++.+ +++|||++|++.|.++ ..|+|+|
T Consensus 81 ES~~d~~K~~at~v~~~lg~--~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~--~~~LvI~sD~a~~~~~~~~E~t~G 156 (377)
T COG3425 81 ESGPDAVKPTATIVAEALGL--NPSARAADVEFACYAGTAALQAAIGWVESGMI--SYGLVIGADTAQYAPGDALEYTAG 156 (377)
T ss_pred CCCcccccchHHHHHHHhCC--CCceehhhHHHHHHHHHHHHHHHHHHHHcCCc--cceEEEeehhhccCCCcccCccCC
Confidence 99999999999999999999 89999999999999999999999999999976 8999999999999998 5699999
Q ss_pred cceeEEEecCCCCceeecccccccccCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccc
Q 012253 166 AAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDV 245 (467)
Q Consensus 166 dGAvA~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~ 245 (467)
+|||||||++++++..+....++++.+.+|||||... .||.+||++|..+|.+++..+++.|.++. +++++||
T Consensus 157 AGavA~lIg~n~~~~a~~~~~~syt~d~~DFwRp~~~-~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~------gls~~df 229 (377)
T COG3425 157 AGAVAFLIGKNPPIVAEFEGTGSYTTDTPDFWRPDGQ-PYPYVDGRFSEPAYFKHVENAAKGYMEKT------GLSPDDF 229 (377)
T ss_pred CceEEEEEccCCCeEEEecCceEEecCCCcccccCCC-cccccCceecHHHHHHHHHHHHHHHHHHh------CCChhhh
Confidence 9999999999987766666899999999999999955 89999999999999999999999999887 5889999
Q ss_pred ceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccc
Q 012253 246 DYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIP 325 (467)
Q Consensus 246 d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~ 325 (467)
|++|||+||+||++|+++.+++ + .+++.|++.++
T Consensus 230 dy~vfH~P~~k~~~ka~k~l~~------------------------~----------------------~e~v~~~l~~~ 263 (377)
T COG3425 230 DYIVFHQPNGKFPKKAAKSLGF------------------------K----------------------EEQVKPGLVYP 263 (377)
T ss_pred CeEEecCCCCchHHHHHHHhCc------------------------c----------------------HhhcCccchhh
Confidence 9999999999999999998842 1 25788999999
Q ss_pred cccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEecCCCCcchhhhhhcCChHHHhcccccCChH
Q 012253 326 KQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSNIVKVMDVPGKLKLRHEFPPE 405 (467)
Q Consensus 326 ~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~r~~~~~~ 405 (467)
+++||+||||+|++|+++|++. + ++|+||+++|||||+.+++|++++++ ++++++++..+..+|.+|+++|+.
T Consensus 264 ~~vGN~YtgS~~L~Las~L~~a-~-~~G~rIl~~SYGSGa~s~~fs~~v~~-----~~~~~~~~~~~~~~l~~R~~ls~~ 336 (377)
T COG3425 264 QRIGNTYTGSLLLGLASLLDNA-K-LPGDRILLFSYGSGAGSEAFSITVTD-----GIEERRKKLAPTVLLEQRNRLSYI 336 (377)
T ss_pred hhcCcccchhHHHHHHHHHhhc-C-CCCCEEEEEeeCCCcceeEEEEEecc-----cHHHHhhhcchHHHHHhhccCCHH
Confidence 9999999999999999999995 3 79999999999999999999999999 899999899999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCccCCCCCCcCCCcEEEEeeCCCCceEEee
Q 012253 406 KFVDIMKLMEHRYGAKDFVTSKDSSLLSPGTCYLTEVDSMFRRFYAK 452 (467)
Q Consensus 406 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~R~Y~~ 452 (467)
+|+.+++.|...+..+++.+ ...+.|||..|++ +.|.|.+
T Consensus 337 dYe~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~-~~R~y~~ 376 (377)
T COG3425 337 DYELYFKRRKKIRLGKDNEF------YDSGDYYLEEIDD-HFRRYRY 376 (377)
T ss_pred HHHHHHhhhccccccccccc------ccCCceEEeeccC-CceeEee
Confidence 99999998776665544444 4568899999999 6666754
No 5
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=1.5e-71 Score=570.92 Aligned_cols=377 Identities=28% Similarity=0.440 Sum_probs=330.6
Q ss_pred eEEeEEEEecCCceeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEecc
Q 012253 9 VGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSET 88 (467)
Q Consensus 9 vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes 88 (467)
|||.+|++|+|+++|++++|++.+|++++||..|+|++++++++++||+++||++|+++||+++ +|++||+|+++|+|
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g~~~~~~~~g~G~~~~~~~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s 78 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTES 78 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhCCCHHHHHhhcCceEEeeCCCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCC
Confidence 6999999999999999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred CCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecccccCC-CCCCccccc
Q 012253 89 VIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEG-PARPTGGAA 167 (467)
Q Consensus 89 ~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~~~-~~~~t~GdG 167 (467)
+++.+|+++++|+++||+ +++|+++|+++||+|++.||++|.+||+++. .++||||++|+++|... +.++|||||
T Consensus 79 ~~~~~~s~a~~v~~~Lgl--~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~--~~~aLVv~~D~a~~~~~~~~~~~~GdG 154 (379)
T TIGR01835 79 GIDQSKAAAVYVHGLLGL--QPFCRSFELKQACYGATAALQMAKGHVALSP--DRKVLVIASDIAKYGLESPGEPTQGAG 154 (379)
T ss_pred CCCCCCCHHHHHHHHhCC--CCCceEEEeccccHHHHHHHHHHHHHHHcCC--CCeEEEEEeehhhcccCCCCCccccCc
Confidence 999999999999999998 5689999999999999999999999999995 49999999999988754 458999999
Q ss_pred eeEEEecCCCCc-eeecccccccccCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccc
Q 012253 168 AVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVD 246 (467)
Q Consensus 168 AvA~Ll~~~~~~-~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d 246 (467)
|+||||++++++ .++. ....++.+.+|||+|.. ..+|.++|+++..+|++.+.++++.++++. +++++|||
T Consensus 155 A~A~Ll~~~~~i~~~~~-~~~~~t~~~~df~~p~~-~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~------g~~~~did 226 (379)
T TIGR01835 155 AVAMLVSADPKLLAINE-DSVLYTDDIMDFWRPNY-STTALVDGQYSNEQYLNAFENAWNDYAKRT------GLSLADFA 226 (379)
T ss_pred cEEEEEecCCCeeEEec-cceeeecCCCCccCCCC-CCceeECcHHHHHHHHHHHHHHHHHHHHHh------CCCHHHcC
Confidence 999999998764 3433 24467888899999974 568999999999999999999999998765 58899999
Q ss_pred eeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCccccc
Q 012253 247 YFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPK 326 (467)
Q Consensus 247 ~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~ 326 (467)
+++|||||.+|+.|++++++ +++ +++.+ +.+.+.+++|+.+.+
T Consensus 227 ~~i~H~p~~~~~~k~~~~~l-~~~-------------------~~~~~-----------------~~~~~~~~~s~~~~~ 269 (379)
T TIGR01835 227 AFCFHVPFTKMGLKALRHIL-KKN-------------------YEDED-----------------ESVQNAYLESIIYNR 269 (379)
T ss_pred EEEECCCCCcHHHHHHHHHH-hhc-------------------ccccH-----------------HHHHHHhhhhhhhhh
Confidence 99999999999999988874 110 23321 122344566788889
Q ss_pred ccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEecCCCCcchhhhhhcCChHHHhcccccCChHH
Q 012253 327 QVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSNIVKVMDVPGKLKLRHEFPPEK 406 (467)
Q Consensus 327 ~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~r~~~~~~~ 406 (467)
++|||||||+|++|++++++.+++++||+|+|+|||||+++++|++++.+ ++++...+.++.++|++|+.++++|
T Consensus 270 ~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~-----~~~~~~~~~~~~~~l~~r~~~~~~~ 344 (379)
T TIGR01835 270 EVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVA-----GYRDHLKKERHLALLKNRTNLSYAE 344 (379)
T ss_pred hcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEcc-----cHHHHHhcccHHHHHhCCccCCHHH
Confidence 99999999999999999998325789999999999999999999999998 8988888889999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCccCCCCCCcCCCcEEEEeeCCCCceEE
Q 012253 407 FVDIMKLMEHRYGAKDFVTSKDSSLLSPGTCYLTEVDSMFRRFY 450 (467)
Q Consensus 407 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~R~Y 450 (467)
|+++++.+.. +..+.....+|+|||++|++ |+|+|
T Consensus 345 y~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~-~~r~y 379 (379)
T TIGR01835 345 YEALFEETLP--------TDGDQPGEDRGFFRLAGIND-HKRIY 379 (379)
T ss_pred HHHHHHhccC--------CCCCcccCCCCcEEEEEecc-cEeeC
Confidence 9999987543 11113345688999999999 78888
No 6
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=100.00 E-value=3.8e-61 Score=467.49 Aligned_cols=270 Identities=55% Similarity=0.866 Sum_probs=225.5
Q ss_pred ceeecccccccccCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhh---cCCCCccccceeccCCchH
Q 012253 179 IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLE---GRQFSMLDVDYFVFHSPYN 255 (467)
Q Consensus 179 ~~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~---~~~~~~~d~d~~i~H~p~~ 255 (467)
++|++++.++||.|+||||||+..++||+|||++|++||+++++.||+.|+++..+.. ..+..+++||+++||.||+
T Consensus 1 iv~d~~~~~~~m~~~yDFyKP~~~seyP~VDG~~S~~~Yl~ald~~y~~y~~k~~~~~~~~~~~~~l~~~d~~~fH~Py~ 80 (282)
T PF08540_consen 1 IVFDRGLRGSHMEHVYDFYKPDLSSEYPVVDGKLSIQCYLDALDKCYKRYKEKVEKLANRGNKGTSLDDFDYVCFHSPYC 80 (282)
T ss_dssp EEEETTEEEEEE----SEE-BTTT-SS-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST--GGG-SEEEE--SSH
T ss_pred CcccCCCceeehhhchhccCCCCCCCCcEEchHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCccccceEEEecCch
Confidence 4678889999999999999999899999999999999999999999999999874321 3468899999999999999
Q ss_pred HHHHHHHHhhhhhhhccccCch-hhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccc
Q 012253 256 KLVQKSFARLFFNDFLRNASSV-DEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTA 334 (467)
Q Consensus 256 k~~~k~~~~l~~~~~~~~~~~~-~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~ta 334 (467)
||++|++.+|+++|+..++..+ .....+++.++.+++.+++|+||+++|++.+.+++.|++|++||+.+++++||||||
T Consensus 81 klv~Ka~~rl~~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~dr~lek~~~~~s~~~~~~kv~psl~~~~~vGN~YTa 160 (282)
T PF08540_consen 81 KLVQKAFARLLYNDFLRNPSSEEFEEIDAELAPFRDLPLEESYFDRDLEKAFMKASKEDFERKVEPSLLYSRQVGNMYTA 160 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHCCHGGGTT--GGGHCTHHHHHHHHHHHHHHHHHHHCHHHTHHHHHHB--GGG
T ss_pred HHHHHHHHHHHHhhhhhccccccccccchhhhhhccCCcccccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCceehH
Confidence 9999999999999998776642 233455667777899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHh-hcCcCCCCCEEEEEEeccccceeeEEEEEecCCCCcchhh-------hhhcCChHHHhcccccCChHH
Q 012253 335 SLYAAFASLLH-EKHSSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSN-------IVKVMDVPGKLKLRHEFPPEK 406 (467)
Q Consensus 335 S~~l~L~~~l~-~~~~~~~G~~ill~syGsG~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~L~~r~~~~~~~ 406 (467)
|+|++|+++|. .....+.|+||+|||||||+++++|++++++ +++. +.+.+++.+||++|+++|++|
T Consensus 161 Sly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~-----~~~~~~~~~~~i~~~~dl~~rL~~R~~~s~ee 235 (282)
T PF08540_consen 161 SLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQP-----GAEEGSLLNRLIAKALDLKERLDARTKLSPEE 235 (282)
T ss_dssp HHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-T-----TGGGTSHHHHHHHHHHCHHHHHHTSEEE-HHH
T ss_pred HHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeC-----CccccchhhhHHHhhhhHHHHHhcCcCCCHHH
Confidence 99999999993 2234568999999999999999999999999 5655 677789999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCccCCCCCCcCCCcEEEEeeCCCCceEEeee
Q 012253 407 FVDIMKLMEHRYGAKDFVTSKDSSLLSPGTCYLTEVDSMFRRFYAKK 453 (467)
Q Consensus 407 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~R~Y~~~ 453 (467)
|++++++|++.|+..+|.|.++.+.++||+|||++||++|||+|++|
T Consensus 236 ye~~~~~re~~~~~~~y~p~~~~~~l~~GtyyL~~VD~~~RR~Y~rk 282 (282)
T PF08540_consen 236 YEEILKLREKTYGAKDYTPSGDISSLFPGTYYLTRVDDKHRRTYARK 282 (282)
T ss_dssp HHHHHHHHHHHTTHTSBETTSTGGGSGTTSEEEEEEETTSEEEEEE-
T ss_pred HHHHHHhhhhhccccCCCCCCcccccCCCCEEEcccCCcceEEeccC
Confidence 99999999999999999999999999999999999999999999986
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=1.6e-51 Score=406.80 Aligned_cols=306 Identities=21% Similarity=0.236 Sum_probs=255.8
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhhCCCcCeeE--EeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~--~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
++++|.++|.|+|++.++++|+++..+.+.+|+. +|+.+|++ +.++|...+||++||++||+++|++|+|||+||+
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~--a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~ 79 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRI--AADDETTSDLAVEAARKALEDAGISPDDIDLIIV 79 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecCCceeee--cCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 5789999999999999999999999999999994 68888875 4779999999999999999999999999999999
Q ss_pred EeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-cccCCCCC--
Q 012253 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-VYAEGPAR-- 161 (467)
Q Consensus 85 ~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~-~y~~~~~~-- 161 (467)
+|.||++..|++|+.||+.||+ .++.+||++.+|+|+++||++|..+|++|.+ |+||||++|++ ++.++.+|
T Consensus 80 aT~tpd~~~Ps~A~~vq~~LG~---~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~--k~vLVVg~e~~S~~ld~~dR~t 154 (323)
T COG0332 80 ATSTPDHLFPSTACLVQARLGL---GGAPAFDLQAACSGFLYALSVADGLIRSGGY--KNVLVVGAETLSRILDWTDRDT 154 (323)
T ss_pred EcCCcccCCChHHHHHHHHhCC---CCcceeechhhhHHHHHHHHHHHHHHHcCCC--CEEEEEehhHhhccCCHhhccc
Confidence 9999999999999999999998 6699999999999999999999999999987 99999999999 66666554
Q ss_pred -CccccceeEEEecCCC-CceeecccccccccCcccccccCCC---------CCCceecCcchHHHHHHHHHHHHHHHHH
Q 012253 162 -PTGGAAAVAMLIGPDA-PIAFESKLRGSHMSHAYDFYKPNLA---------SEYPVVDGKLSQTCYLMALDSCYKYFCQ 230 (467)
Q Consensus 162 -~t~GdGAvA~Ll~~~~-~~~~~~~~~~~~~~~~~df~~p~~~---------~~~~~vdG~~s~~~y~~a~~~~~~~~~~ 230 (467)
..|||||+|+||++.+ ...+.....++......-.+.|... ..+..++|+.. |..++....+.+.+
T Consensus 155 ~vlFgDGAgAvvl~~~~~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~v---fk~av~~~~~~~~~ 231 (323)
T COG0332 155 CVLFGDGAGAVVLEATEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREV---FKFAVRAMPKAIEE 231 (323)
T ss_pred eEEEcCCceEEEEecCCCCcCeeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHH---HHHHHHHHHHHHHH
Confidence 5689999999999986 3222111111111111111222211 13457888876 66666665555555
Q ss_pred HHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHH
Q 012253 231 KFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVA 310 (467)
Q Consensus 231 ~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~ 310 (467)
.+ +++++..+|||||++||+|.+|.+++.++| ++|++ |++.++
T Consensus 232 ~L---~~~~l~~~dId~~vpHQan~ri~~~i~~~l------------------------~~~~~---------k~~~~~- 274 (323)
T COG0332 232 VL---EKAGLTPEDIDWFVPHQANLRIIEAIAKKL------------------------GIPEE---------KVVVTV- 274 (323)
T ss_pred HH---HHcCCCHHHCCEEccccccHHHHHHHHHHc------------------------CCCHH---------HHhhHH-
Confidence 54 566899999999999999999999999988 67666 444555
Q ss_pred HHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEe
Q 012253 311 KQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQ 375 (467)
Q Consensus 311 ~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~ 375 (467)
+++||+++||+|++|++++++ +++++||+|+|.+||+|++|+++.++|.
T Consensus 275 ---------------~~yGNtsaAsiplaL~~~~~~-g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 275 ---------------DKYGNTSAASIPLALDEALRE-GRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred ---------------HHhcccccchHHHHHHHHhhh-CCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 899999999999999999999 8999999999999999999999999884
No 8
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=3.3e-51 Score=415.64 Aligned_cols=336 Identities=25% Similarity=0.379 Sum_probs=271.4
Q ss_pred eeEEeEEEEecCCceeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEec
Q 012253 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (467)
Q Consensus 8 ~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Te 87 (467)
+++|.+++.|+|+++|+++++++..+.+++++..++|.+++++++++|++.+|+++|+++||+++|+++++||.|+++|+
T Consensus 1 ~~~I~g~g~~lP~~~v~n~~l~~~~~~~~~~i~~~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~ 80 (345)
T TIGR00748 1 MAGIVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSE 80 (345)
T ss_pred CccEEEEEEeCCCeeecHHHHHHHhCCCHhHeeeccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 47999999999999999999999999999998665666666677899999999999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecccccCCC-CCCcccc
Q 012253 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGP-ARPTGGA 166 (467)
Q Consensus 88 s~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~~~~-~~~t~Gd 166 (467)
++++..|+.+..|++.||+ .+++.++|+.++|+|++.||++|..+|++|.. ++||||++|.......+ .+.++||
T Consensus 81 ~~~~~~p~~a~~v~~~LGl--~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~--~~vLVv~~d~~~~~~~~~~~~~~GD 156 (345)
T TIGR00748 81 SHPYAVKPTATIVAEAIGA--TPDLTAADLEFACKAGTAGIQACMGLVASGMI--KYGLAIGADTAQGAPGDALEYTAGA 156 (345)
T ss_pred CCCccccchHHHHHHHcCC--CCCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeecccCCCccCcccCCC
Confidence 9998889999999999998 55788999999999999999999999999965 99999999998543332 3578899
Q ss_pred ceeEEEecCCCCc-eeecccccccccCcccccccCCCCCCceecCcchH-HHHHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 012253 167 AAVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDSCYKYFCQKFEKLEGRQFSMLD 244 (467)
Q Consensus 167 GAvA~Ll~~~~~~-~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~-~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d 244 (467)
||+|+||++.+.. .+.. . ..+..+..|+|++. +..++...+++.. ..+.+....+++.++ +++++.++|
T Consensus 157 GAaA~vl~~~~~~~~~~~-~-~~~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L------~~~gl~~~d 227 (345)
T TIGR00748 157 GGAAYIIGEKNTVAYFEG-T-YSYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFHHVVTAAKGLM------EKLGLTPED 227 (345)
T ss_pred ceEEEEEccCCcceEeec-c-cceecccccccccC-CCcCCCcCCeecChHHHHHHHHHHHHHHH------HHcCCCHHH
Confidence 9999999977642 2221 1 12233345777763 2233433333322 123333334444444 445799999
Q ss_pred cceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCccc
Q 012253 245 VDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLI 324 (467)
Q Consensus 245 ~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~ 324 (467)
||+|++|||+.+|++.+.++| |+++++.. .+. .
T Consensus 228 id~~i~Hq~~~~~~~~~~~~l------------------------gl~~ek~~----------------------~~~-~ 260 (345)
T TIGR00748 228 FDYAVFHQPNGKFYLVAARML------------------------GFPKEQVK----------------------PGL-L 260 (345)
T ss_pred cCEEEeCCCChHHHHHHHHHc------------------------CCCHHHee----------------------ccc-c
Confidence 999999999999999998887 77776532 111 1
Q ss_pred ccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEecCCCCcchhhhhh-cCChHHHhcccccCC
Q 012253 325 PKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSNIVK-VMDVPGKLKLRHEFP 403 (467)
Q Consensus 325 ~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~~r~~~~ 403 (467)
.+++|||+|||+|++|.++++. +++|++|+|++||+|++|++++++|++ .++..++ +-++.+.|++|+.++
T Consensus 261 ~~~~GNt~sAsipl~L~~~~~~---~~~Gd~vll~~~G~G~s~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 332 (345)
T TIGR00748 261 TPRIGNTYSGATPVGLSAVLDI---AEPGDRILAVSYGSGAGSDAFSIVVQD-----AIEEKRDLAPKVADYIKRKKYID 332 (345)
T ss_pred ccccCchhhhHHHHHHHHHHHh---cCCCCEEEEEEecCCcceeEEEEEEch-----hHHHHhhhhhhHHHHHhcCccCC
Confidence 3799999999999999999864 689999999999999999999999998 7877763 337999999999999
Q ss_pred hHHHHHHH
Q 012253 404 PEKFVDIM 411 (467)
Q Consensus 404 ~~~y~~~~ 411 (467)
+++|+++.
T Consensus 333 ~~~y~~~~ 340 (345)
T TIGR00748 333 YALYAKFR 340 (345)
T ss_pred HHHHHHHh
Confidence 99999874
No 9
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=3.6e-51 Score=416.09 Aligned_cols=337 Identities=25% Similarity=0.372 Sum_probs=271.8
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEe
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~T 86 (467)
|+|+|.+++.|+|+++|+++++++..|.+++|+...+|.++++++++++++.+|+++|+++||+++|+++++||+|+++|
T Consensus 1 ~~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s 80 (347)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGS 80 (347)
T ss_pred CceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhhccCeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 57999999999999999999999999999888753344444457788999999999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecccccCCC-CCCccc
Q 012253 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGP-ARPTGG 165 (467)
Q Consensus 87 es~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~~~~-~~~t~G 165 (467)
+++++..|+.+.+|++.||+ .+++.++|+.++|+|++.||+.|..+|++|.. ++||||++|...+...+ .+.++|
T Consensus 81 ~~~~~~~p~~a~~v~~~Lgl--~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~--~~aLVv~~e~~~~~~~~~~~~~~G 156 (347)
T PRK04262 81 ESHPYAVKPTATIVAEALGA--TPDLTAADLEFACKAGTAALQAAMGLVKSGMI--KYALAIGADTAQGAPGDALEYTAA 156 (347)
T ss_pred cCCCcccccHHHHHHHHcCC--CCCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeeeccCCCCCCCCcCC
Confidence 99998889999999999998 45688999999999999999999999999954 99999999997543322 256789
Q ss_pred cceeEEEecCCCCc-eeecccccccccCcccccccCCCCCCceecCcchH-HHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 012253 166 AAAVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDSCYKYFCQKFEKLEGRQFSML 243 (467)
Q Consensus 166 dGAvA~Ll~~~~~~-~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~-~~y~~a~~~~~~~~~~~~~~~~~~~~~~~ 243 (467)
|||+|+||++++.. .+.. ..++..+..|+|++. +..++.....++. ..|.+.+..+++.++++. +++++
T Consensus 157 DGA~A~ll~~~~~~~~i~~--~~~~~~d~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~------gl~~~ 227 (347)
T PRK04262 157 AGGAAFIIGKEEVIAEIEA--TYSYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFKHIISAAKGLMEKL------GLKPS 227 (347)
T ss_pred CCcEEEEEecCcccceeec--cccccccchhhcCCC-CCcCCCcCceecchHHHHHHHHHHHHHHHHHh------CcCHH
Confidence 99999999986542 2221 112334556788754 2222322222222 145566666666665544 69999
Q ss_pred ccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcc
Q 012253 244 DVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTL 323 (467)
Q Consensus 244 d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~ 323 (467)
|||+|+|||++.+|++.+.++| ++|+++.+ .+.
T Consensus 228 dId~~v~Hq~n~~~~~~~~~~L------------------------gl~~ek~~----------------------~~~- 260 (347)
T PRK04262 228 DYDYAVFHQPNGKFPLRVAKML------------------------GFTKEQVK----------------------PGL- 260 (347)
T ss_pred HhceeecCCCchHHHHHHHHHc------------------------CCCHHHhh----------------------ccc-
Confidence 9999999999999999999888 77776532 112
Q ss_pred cccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEecCCCCcchhhhh-hcCChHHHhcccccC
Q 012253 324 IPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSNIV-KVMDVPGKLKLRHEF 402 (467)
Q Consensus 324 ~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~~r~~~ 402 (467)
+.+++|||+|||+|++|.++++. +++|++|+|++||+|+++++++++|++ .++..+ ...++.+.|++|+.+
T Consensus 261 ~~~~~GNt~sAsi~~~L~~~~~~---~~~Gd~vll~~~G~G~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~ 332 (347)
T PRK04262 261 LTPYIGNTYSGSALLGLAAVLDV---AKPGDRILVVSFGSGAGSDAFSITVTD-----AIEEKRDLAPTVEDYLERKKYI 332 (347)
T ss_pred hhhhhCChHHHHHHHHHHHHHHh---CCCCCEEEEEecCCCcceeeEEEEech-----hHHHhhhccccHHHHHhCCccC
Confidence 23899999999999999999874 579999999999999999999999998 677664 334799999999999
Q ss_pred ChHHHHHHH
Q 012253 403 PPEKFVDIM 411 (467)
Q Consensus 403 ~~~~y~~~~ 411 (467)
++++|+++.
T Consensus 333 ~~~~y~~~~ 341 (347)
T PRK04262 333 DYAVYAKYR 341 (347)
T ss_pred CHHHHHHHh
Confidence 999999874
No 10
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=100.00 E-value=1.7e-51 Score=368.60 Aligned_cols=174 Identities=54% Similarity=0.876 Sum_probs=153.2
Q ss_pred CCceeEEeEEEEecCCceeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 5 HPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 5 ~~~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
||++|||++|++|+|+++|+++||++++|++++||++||||++|+|++++||+++||++|++++|++.+++|++|++|+|
T Consensus 1 ~p~~VGI~~i~~y~p~~~v~~~~La~~~g~d~~K~~~glgq~~~av~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~v 80 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRYYVDQEELAEARGVDPGKYTIGLGQEKMAVPPPDEDIVTMAANAAKPLLDRYNIDPDDIGRLIV 80 (174)
T ss_dssp --SSEEEEEEEEE-ESEEEEHHHHHHHTTS-TCHHHTTT--SEEEE--TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEE
T ss_pred CCccccEeEEEEecCceEecHHHHHHHhCCCHHHhhhhcCeeEEEeCCCcccHHHHHHHHHHHHHHHcCCCHHHccEEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecccccCCCCCCcc
Q 012253 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTG 164 (467)
Q Consensus 85 ~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~~~~~~~t~ 164 (467)
||||++|++||++++||++||++|+++|++||++|||||||+||++|.+||+++.+||+++|||++|+++|..++.|+|+
T Consensus 81 gTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA~y~~g~~e~Tq 160 (174)
T PF01154_consen 81 GTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIARYDLGSAEPTQ 160 (174)
T ss_dssp E-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE--STTTTGGG-
T ss_pred eccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccccccCCCCccccc
Confidence 99999999999999999999998889999999999999999999999999999988999999999999999998889999
Q ss_pred ccceeEEEecCCCC
Q 012253 165 GAAAVAMLIGPDAP 178 (467)
Q Consensus 165 GdGAvA~Ll~~~~~ 178 (467)
|+|||||||++++|
T Consensus 161 GAGAVAmLi~~nap 174 (174)
T PF01154_consen 161 GAGAVAMLIGPNAP 174 (174)
T ss_dssp EEEEEEEEEECS-S
T ss_pred cceeEEEEecCCCC
Confidence 99999999999865
No 11
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=4.1e-47 Score=383.19 Aligned_cols=304 Identities=17% Similarity=0.198 Sum_probs=240.3
Q ss_pred eeEEeEEEEecCCceeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEec
Q 012253 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (467)
Q Consensus 8 ~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Te 87 (467)
.++|.+++.|+|+++|+++|+++..|.+++++...+|.+++.++.++|++.+||++||++||+++|++|++||+||++|+
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~ 82 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLATS 82 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHcCCCHHHhhhccCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 58999999999999999999999999988888544455555567889999999999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-ccCC---CCCCc
Q 012253 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-YAEG---PARPT 163 (467)
Q Consensus 88 s~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-y~~~---~~~~t 163 (467)
++++..|+.+.+|+++||+ +++.+||++++|+|++.||++|.++|+++ . ++||||++|... ..+. .....
T Consensus 83 ~~d~~~p~~a~~v~~~Lg~---~~~~~~di~~~C~g~~~aL~~A~~~l~~~--~-~~aLVv~~d~~s~~~~~~~~~~~~l 156 (326)
T PRK05963 83 TPDHLLPPSAPLLAHRLGL---QNSGAIDLAGACAGFLYALVLADGFVRAQ--G-KPVLVVAANILSRRINMAERASAVL 156 (326)
T ss_pred CCCCCCCcHHHHHHHHhCC---CCCceeeccchhhHHHHHHHHHHHHHHcC--C-CeEEEEEechhhccCCccccCceEE
Confidence 9988899999999999998 56889999999999999999999999987 3 899999999872 2222 12356
Q ss_pred cccceeEEEecCCCC--ceeecccccccccCccccc-ccCCCCC-------------CceecCcchHHHHHHHHHHHHHH
Q 012253 164 GGAAAVAMLIGPDAP--IAFESKLRGSHMSHAYDFY-KPNLASE-------------YPVVDGKLSQTCYLMALDSCYKY 227 (467)
Q Consensus 164 ~GdGAvA~Ll~~~~~--~~~~~~~~~~~~~~~~df~-~p~~~~~-------------~~~vdG~~s~~~y~~a~~~~~~~ 227 (467)
|||||+|+||++++. ..+......+.. +.+|++ .|..+.. +...+|+.....+.+.+.++++.
T Consensus 157 fGDgA~A~ll~~~~~~~~~~l~~~~~t~~-~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (326)
T PRK05963 157 FADAAGAVVLAPSAKANSGVLGSQLISDG-SHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQN 235 (326)
T ss_pred EeecceEEEEEecCCCCCceEEEEEEEcC-CCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHH
Confidence 899999999998653 111111111111 123322 2321111 12236666655555555555554
Q ss_pred HHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHH
Q 012253 228 FCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQ 307 (467)
Q Consensus 228 ~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~ 307 (467)
+++ +++++++|||+|+|||++.++++++.++| ++++++. ..
T Consensus 236 ~L~------~~gl~~~did~~~~h~~~~~~~~~~~~~l------------------------~l~~~k~---------~~ 276 (326)
T PRK05963 236 VLA------SAAMTPQDIDRFFPHQANARIVDKVCETI------------------------GIPRAKA---------AS 276 (326)
T ss_pred HHH------HcCCCHHHCCEEEeCCCCHHHHHHHHHHc------------------------CCCHHHh---------hh
Confidence 443 45799999999999999999999998888 7887653 22
Q ss_pred HHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEE
Q 012253 308 QVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQL 374 (467)
Q Consensus 308 ~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~ 374 (467)
++ +++||++|||+|++|..++++ +++++||+|+++++|+|+++++.+++|
T Consensus 277 ~l----------------~~~Gn~~sas~~~~L~~~~~~-~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 277 TL----------------ETYGNSSAATIPLSLSLANLE-QPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred hH----------------HhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 33 799999999999999999988 788899999999999999999999886
No 12
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.9e-45 Score=371.78 Aligned_cols=305 Identities=20% Similarity=0.225 Sum_probs=234.8
Q ss_pred CCCCceeEEeEEEEecCCceeehhHH-hhhhCCCc---Cee--EEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCc
Q 012253 3 SWHPKNVGILALDIYFPPTCVLQEAL-EVHDGVSK---GKY--TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDP 76 (467)
Q Consensus 3 ~~~~~~vgI~ai~~y~P~~~v~~~el-~~~~g~~~---~k~--~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~ 76 (467)
..+.++++|.++++|+|+++|+++++ .+..+.+. +++ .+||..|+ ++.++|++.+||++|+++||+++|+++
T Consensus 2 ~~~~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~--~~~~~e~~~~la~~Aa~~aL~~a~~~~ 79 (353)
T PRK12880 2 KTRFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRY--ICDENTCVSDLGKHAANTLLQGLNIDK 79 (353)
T ss_pred cccccccEEEEEEEECCCeEecHHHHHHHhcCcchhhhhhhhhccCceEEE--eCCCCCCHHHHHHHHHHHHHHHcCCCH
Confidence 45678899999999999999999975 44443221 233 25666666 556789999999999999999999999
Q ss_pred CCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-cc
Q 012253 77 TQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-VY 155 (467)
Q Consensus 77 ~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~-~y 155 (467)
+|||+||++|+|+++..|+++++|+++||+ ++++.+||+++||+|++.||++|.+|+++| +.+ ||||++|.+ ++
T Consensus 80 ~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~--~~~~~~~di~~~C~g~~~aL~~A~~~i~~~--~~~-~LVv~~e~~S~~ 154 (353)
T PRK12880 80 NSLDALIVVTQSPDFFMPSTACYLHQLLNL--SSKTIAFDLGQACAGYLYGLFVAHSLIQSG--LGK-ILLICGDTLSKF 154 (353)
T ss_pred HHCCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCCceEEehhhhhHHHHHHHHHHHHHHHcC--CCC-EEEEEehhhhcc
Confidence 999999999999999999999999999998 568999999999999999999999999999 448 999999987 33
Q ss_pred cCC---CCCCccccceeEEEecCCCC--ceeecccccccccCcccccccCCC----------------------CCCcee
Q 012253 156 AEG---PARPTGGAAAVAMLIGPDAP--IAFESKLRGSHMSHAYDFYKPNLA----------------------SEYPVV 208 (467)
Q Consensus 156 ~~~---~~~~t~GdGAvA~Ll~~~~~--~~~~~~~~~~~~~~~~df~~p~~~----------------------~~~~~v 208 (467)
.++ ...++|||||+|+||++++. ..+.....+.+.. ....|..+ ..+..+
T Consensus 155 ~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~---~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (353)
T PRK12880 155 IHPKNMNLAPIFGDGVSATLIEKTDFNEAFFELGSDGKYFD---KLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYM 231 (353)
T ss_pred CCcccCCceeeecccceEEEEEecCCCCceEEEEecCCCCC---eEEecCCCcCCCccccccccccccccccccCceEEE
Confidence 333 23578999999999987542 1111001111111 01111100 112357
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCC
Q 012253 209 DGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPY 288 (467)
Q Consensus 209 dG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 288 (467)
+|+.....+.+.+..+++.+++ ++|++.+|||+|++||++.+|++.+.++|
T Consensus 232 ~g~~v~~~~~~~~~~~i~~~L~------~~gl~~~did~~v~HQ~~~~i~~~i~~~L----------------------- 282 (353)
T PRK12880 232 DGANIFNMALECEPKSFKEILE------FSKVDEKDIAFHLFHQSNAYLVDCIKEEL----------------------- 282 (353)
T ss_pred cCHHHHHHHHHHHHHHHHHHHH------HcCCCHHHCCEEEECCCCHHHHHHHHHHh-----------------------
Confidence 7887755555555555555554 44799999999999999999999999988
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecccccee
Q 012253 289 STLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTAT 368 (467)
Q Consensus 289 ~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~ 368 (467)
++++++.. . .+.+++|||+|||+|++|..+++. +++ +++|.++|+|++|+
T Consensus 283 -gl~~ek~~---------~---------------~~l~~~GNtssasip~~L~~~~~~-~~~----~~ll~~~G~G~s~g 332 (353)
T PRK12880 283 -KLNDDKVP---------N---------------FIMEKYANLSACSLPALLCELDTP-KEF----KASLSAFGAGLSWG 332 (353)
T ss_pred -CCCHHHhh---------h---------------hhHHhhCCHHHHHHHHHHHHHHHc-CCc----EEEEEEEchhhhhe
Confidence 78877531 1 123799999999999999999876 443 59999999999999
Q ss_pred eEEEEEec
Q 012253 369 MFSLQLQE 376 (467)
Q Consensus 369 ~~~~~~~~ 376 (467)
+.+++|.+
T Consensus 333 ~~ll~~~~ 340 (353)
T PRK12880 333 SAVLNFKD 340 (353)
T ss_pred EeEEEECC
Confidence 99999976
No 13
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.2e-44 Score=362.98 Aligned_cols=306 Identities=16% Similarity=0.204 Sum_probs=238.7
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhhCCCcCee--EEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKY--TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
++++|.++++|+|+++++++|+++..+.+.+++ ++|+.+|+ ++.++|+..+|+++|++++|+++|+++++||.||+
T Consensus 3 ~~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~~~~Gi~~r~--~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~ 80 (325)
T PRK12879 3 SYARITGIGTYVPPRVLTNDDLETFIDTSDEWIVQRTGIKERR--IAHVEEYTSDLAIKAAERALARAGLDAEDIDLIIV 80 (325)
T ss_pred CCCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhhhccCceEEE--ECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 579999999999999999999999988766665 35666666 55788999999999999999999999999999999
Q ss_pred EeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-cccCCC---C
Q 012253 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-VYAEGP---A 160 (467)
Q Consensus 85 ~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~-~y~~~~---~ 160 (467)
+|+++++..|+.+.+|++.||+ +++.+++++++|+|++.||.+|.++|++|.. ++||||++|.+ .+.+.. .
T Consensus 81 ~~~~~~~~~~~~a~~l~~~lg~---~~~~~~~v~~~C~~~~~al~~A~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~~~~ 155 (325)
T PRK12879 81 ATTTPDYLFPSTASQVQARLGI---PNAAAFDINAACAGFLYGLETANGLITSGLY--KKVLVIGAERLSKVTDYTDRTT 155 (325)
T ss_pred EcCCCCCCCChHHHHHHHHhCC---CCCcEEEECccchHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCccccCc
Confidence 9999888899999999999998 4588999999999999999999999999954 99999999987 332222 2
Q ss_pred CCccccceeEEEecCCCC-ceeecccccccccCcccccccCCCC----------CCceecCcchHHHHHHHHHHHHHHHH
Q 012253 161 RPTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLAS----------EYPVVDGKLSQTCYLMALDSCYKYFC 229 (467)
Q Consensus 161 ~~t~GdGAvA~Ll~~~~~-~~~~~~~~~~~~~~~~df~~p~~~~----------~~~~vdG~~s~~~y~~a~~~~~~~~~ 229 (467)
..++||||+|+||++++. ..+.....++.......++.|..+. .+..++|+.......+.+..+++.++
T Consensus 156 ~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L 235 (325)
T PRK12879 156 CILFGDGAGAVVLEATENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVL 235 (325)
T ss_pred eEEEeecceEEEEEecCCCCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHH
Confidence 356899999999998763 2221111111111111222222211 12345665442222333334444444
Q ss_pred HHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHH
Q 012253 230 QKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQV 309 (467)
Q Consensus 230 ~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~ 309 (467)
+++++.++|||+|++||++.++++...++| |+++++.+ .++
T Consensus 236 ------~~~g~~~~did~~~~h~~~~~~~~~~~~~l------------------------g~~~~~~~---------~~~ 276 (325)
T PRK12879 236 ------EKAGLTKDDIDWVIPHQANLRIIESLCEKL------------------------GIPMEKTL---------VSV 276 (325)
T ss_pred ------HHcCCCHHHCCEEEECCCCHHHHHHHHHHc------------------------CCCHHHhh---------hhH
Confidence 345799999999999999999999888877 77776532 122
Q ss_pred HHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEe
Q 012253 310 AKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQ 375 (467)
Q Consensus 310 ~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~ 375 (467)
+++||++|+|+|++|.+++++ +.+++|++|+|++||+|+++++++++|+
T Consensus 277 ----------------~~~Gn~~sas~~~~L~~~~~~-g~~~~Gd~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 277 ----------------EYYGNTSAATIPLALDLALEQ-GKIKPGDTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred ----------------hhhCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhhEEEEEEeC
Confidence 799999999999999999998 7889999999999999999999999984
No 14
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.4e-44 Score=366.45 Aligned_cols=308 Identities=20% Similarity=0.216 Sum_probs=242.6
Q ss_pred CCceeEEeEEEEecCCceeehhHHhhhh-------CCCcCeeE--EeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCC
Q 012253 5 HPKNVGILALDIYFPPTCVLQEALEVHD-------GVSKGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKID 75 (467)
Q Consensus 5 ~~~~vgI~ai~~y~P~~~v~~~el~~~~-------g~~~~k~~--~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~ 75 (467)
+..+|+|.+++.|+|+++++++++++.. +.+++++. +|+.+|+ +.++++++.+|+++|+++||+++|++
T Consensus 2 ~~~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~--~~~~~~~~~~la~~Aa~~aL~~ag~~ 79 (338)
T PRK09258 2 KYSNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEALTGIRERR--WWPEGTQLSDGAIAAGRKALAEAGID 79 (338)
T ss_pred cccceEEEEEEecCCCccCcHHHHHHHhhhcccccCCChhHhhhhcCceeEe--cCCCCCCHHHHHHHHHHHHHHHcCCC
Confidence 4577999999999999999999999863 34555563 5666666 45778999999999999999999999
Q ss_pred cCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-
Q 012253 76 PTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV- 154 (467)
Q Consensus 76 ~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~- 154 (467)
+++||+|+++|+++++..|+++.+|++.||+ ++++.++|+.++|+|++.||++|.++|++|.. ++||||++|.+.
T Consensus 80 ~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl--~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~--~~~Lvv~~e~~s~ 155 (338)
T PRK09258 80 PSDIGLLINTSVCRDYLEPATACRVHHNLGL--PKSCANFDVSNACLGFLNGMLDAANMIELGQI--DYALVVSGESARE 155 (338)
T ss_pred HHHCCEEEEEcCCCCCCCChHHHHHHHHcCC--CCCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEecccch
Confidence 9999999999999988899999999999998 55789999999999999999999999999954 999999999872
Q ss_pred ccCC-------CC-----------CCccccceeEEEecCCCCceeecccccccccCcccccccC-CCCCCceecCcchHH
Q 012253 155 YAEG-------PA-----------RPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPN-LASEYPVVDGKLSQT 215 (467)
Q Consensus 155 y~~~-------~~-----------~~t~GdGAvA~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~-~~~~~~~vdG~~s~~ 215 (467)
+.+. +. ..++||||+|+||++++...-...+.+..+....+++... .+..+..++++....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (338)
T PRK09258 156 IVEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPRGHRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLK 235 (338)
T ss_pred hccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCCcceeeeeeeecCCCcccccccCccceEEcHHHHHH
Confidence 1110 11 2468999999999986421000011122221112222111 112345678887776
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcch
Q 012253 216 CYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVE 295 (467)
Q Consensus 216 ~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~ 295 (467)
.+...+..+++.++++ ++++++|||+|++||++.++++.+.++| ++|+++
T Consensus 236 ~~~~~~~~~~~~~L~~------~g~~~~did~~i~H~~~~~~~~~~~~~l------------------------gl~~~k 285 (338)
T PRK09258 236 EGVELAVDTWEAFLAQ------LGWAVEQVDRVICHQVGAAHTRAILKAL------------------------GIDPEK 285 (338)
T ss_pred HHHHHHHHHHHHHHHH------cCCCHHHCCEEecCCCCHHHHHHHHHHh------------------------CCCHHH
Confidence 6766666666666544 4689999999999999999999998887 787775
Q ss_pred hhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEE
Q 012253 296 SYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQL 374 (467)
Q Consensus 296 ~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~ 374 (467)
.+ .++ +++|||+++|+|++|++++++ +++++|++|++++||+|+++++++++|
T Consensus 286 ~~---------~~~----------------~~~GN~~sas~~~~L~~~~~~-g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 286 VF---------TTF----------------PTLGNMGPASLPITLAMAAEE-GFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred ce---------ehH----------------hhhCCcHHhHHHHHHHHHHHh-CCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 42 122 699999999999999999988 788999999999999999999999886
No 15
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=6.8e-44 Score=359.81 Aligned_cols=304 Identities=20% Similarity=0.263 Sum_probs=235.3
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhhCCCcCeeE--EeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~--~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
|.|+|.++++|+|+++|+++|+++..+.+..++. +|+..|+ ++.++++..+|+.+|++++|+++|++|++||.||+
T Consensus 1 ~~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~~~~gi~~r~--~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~ 78 (326)
T CHL00203 1 MGVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRH--LAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIIL 78 (326)
T ss_pred CccEEEEEEEECCCeEEcHHHHHHhcCCChhhEeeccCeEEEE--eCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 4689999999999999999999999987666664 5666655 55789999999999999999999999999999999
Q ss_pred EeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-cccCCC---C
Q 012253 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-VYAEGP---A 160 (467)
Q Consensus 85 ~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~-~y~~~~---~ 160 (467)
+|+++.+.. +.+.+|++.||+ .++.++|+.++|+|++.||++|..+|++|.. +++|||++|.+ .+.+.. .
T Consensus 79 ~s~~~~~~~-~~~~~v~~~Lg~---~~~~~~~v~~~Casg~~al~~A~~~i~sg~~--~~~Lvv~~e~~s~~~~~~~~~~ 152 (326)
T CHL00203 79 ATSTPDDLF-GSASQLQAEIGA---TRAVAFDITAACSGFILALVTATQFIQNGSY--KNILVVGADTLSKWIDWSDRKT 152 (326)
T ss_pred EeCCCCCCC-chHHHHHHHhCC---CCCceeeecccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhhCcCCcccCCc
Confidence 998887654 567899999997 5688999999999999999999999999965 99999999997 332322 3
Q ss_pred CCccccceeEEEecCCCCc---eeecccccccccCcccc-c------------ccCCCCCCceecCcchHHHHHHHHHHH
Q 012253 161 RPTGGAAAVAMLIGPDAPI---AFESKLRGSHMSHAYDF-Y------------KPNLASEYPVVDGKLSQTCYLMALDSC 224 (467)
Q Consensus 161 ~~t~GdGAvA~Ll~~~~~~---~~~~~~~~~~~~~~~df-~------------~p~~~~~~~~vdG~~s~~~y~~a~~~~ 224 (467)
..+|||||+|+||++.+.. .+.....+.+... ..+ . .|.....+..++|+.. |..++...
T Consensus 153 ~~~fgDga~A~ll~~~~~~~~~~~~~~t~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~ 228 (326)
T CHL00203 153 CILFGDGAGAAIIGASYENSILGFKLCTDGKLNSH-LQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEV---YKFAVFQV 228 (326)
T ss_pred eEEEcceeeEEEEEEcCCCCeEEEEEEEcCCCcce-EEecCCCCCcccccccccccCCcceEEECCHHH---HHHHHHHH
Confidence 4678999999999986531 1111011111010 001 0 1111112334667655 33333333
Q ss_pred HHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHH
Q 012253 225 YKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEK 304 (467)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k 304 (467)
.+.+.+.+ ++++++++|||+|++||++.++++.+.++| |+|+++..
T Consensus 229 ~~~i~~~L---~~~g~~~~did~~~~hq~~~~~~~~~~~~l------------------------gl~~~k~~------- 274 (326)
T CHL00203 229 PAVIIKCL---NALNISIDEVDWFILHQANKRILEAIANRL------------------------SVPNSKMI------- 274 (326)
T ss_pred HHHHHHHH---HHcCCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCCHHHhh-------
Confidence 33333322 456899999999999999999999998888 78877542
Q ss_pred HHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEe
Q 012253 305 ASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQ 375 (467)
Q Consensus 305 ~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~ 375 (467)
.++ +++||++|||++++|++++++ +++++|++|+|+++|+|+++++.+++|+
T Consensus 275 --~~l----------------~~~Gn~~sasi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 275 --TNL----------------EKYGNTSAASIPLALDEAIQN-NKIQPGQIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred --hHH----------------HhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEchhhhheEEEEEeC
Confidence 233 799999999999999999998 7889999999999999999999999985
No 16
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=5.2e-44 Score=361.08 Aligned_cols=304 Identities=14% Similarity=0.147 Sum_probs=237.0
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhhCCCcCeeE--EeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~--~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
++++|.++++|+|+++++++++++..+.+.+++. +|+..|+ +.. +|++.+|+.+|++++|+++|++|+|||+||+
T Consensus 3 ~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~R~--~~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~li~ 79 (329)
T PRK07204 3 RYISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTRH--FVD-GETSSYMGAEAAKKAVEDAKLTLDDIDCIIC 79 (329)
T ss_pred CCcEEEEEEEeCCCceecHHHHHHhhCCCHhHhhhccCceEEe--ecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 4589999999999999999999999998877774 4555555 445 8999999999999999999999999999999
Q ss_pred EeccCCCCCCcHHHHHHHHhcccCCC-CeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-ccCCC---
Q 012253 85 GSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-YAEGP--- 159 (467)
Q Consensus 85 ~Tes~~~~~ps~a~~v~~~Lgl~G~~-~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-y~~~~--- 159 (467)
+|+++.+..|+.+.+|++.||+ .+ .+.++|++++|+|++.||.+|..++++|.. ++||||++|.+. +.+..
T Consensus 80 ~~~~~~~~~p~~a~~v~~~lgl--~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~~~ 155 (329)
T PRK07204 80 ASGTIQQAIPCTASLIQEQLGL--QHSGIPCFDINSTCLSFITALDTISYAIECGRY--KRVLIISSEISSVGLNWGQNE 155 (329)
T ss_pred ECCCCCCCCccHHHHHHHHhCC--CCCCceEEEccchhHHHHHHHHHHHHHHHCCCC--CEEEEEEeccccCCCCcccCc
Confidence 9999988889999999999998 33 479999999999999999999999999955 999999999973 22322
Q ss_pred CCCccccceeEEEecCCCC-ceeecccccccccCcccc---------------cccCCCCCCceecCcchHHHHHHHHHH
Q 012253 160 ARPTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDF---------------YKPNLASEYPVVDGKLSQTCYLMALDS 223 (467)
Q Consensus 160 ~~~t~GdGAvA~Ll~~~~~-~~~~~~~~~~~~~~~~df---------------~~p~~~~~~~~vdG~~s~~~y~~a~~~ 223 (467)
....|||||+|+||++++. ..+......++... .++ +.+.....+..++|+.......+.+..
T Consensus 156 ~~~lfGDGAaA~ll~~~~~~~~il~~~~~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (329)
T PRK07204 156 SCILFGDGAAAVVITKGDHSSRILASHMETYSSG-AHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMK 234 (329)
T ss_pred ceEEEecccEEEEEEEcCCCCcEEEEEEEEecCC-CCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHH
Confidence 2356899999999998753 11111011111110 011 111101112345666654444445555
Q ss_pred HHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHH
Q 012253 224 CYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLE 303 (467)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~ 303 (467)
+++.+++ +++++++|||+|++||++.++++.+.++| ++|+++.
T Consensus 235 ~i~~~L~------~~gl~~~did~~~~H~~~~~~~~~i~~~l------------------------~l~~e~~------- 277 (329)
T PRK07204 235 FIDKLLM------DAGYTLADIDLIVPHQASGPAMRLIRKKL------------------------GVDEERF------- 277 (329)
T ss_pred HHHHHHH------HcCCCHHHCCEEEeCCCCHHHHHHHHHHc------------------------CCCHHHh-------
Confidence 5555554 45799999999999999999999888877 7776643
Q ss_pred HHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEE
Q 012253 304 KASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQL 374 (467)
Q Consensus 304 k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~ 374 (467)
+.++ +++||++++|+|++|.+++++ +++++|++|+|+++|+|+++++.+++|
T Consensus 278 --~~~~----------------~~~Gn~~sas~~~~L~~~~~~-g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 278 --VTIF----------------EDHGNMIAASIPVALFEAIKQ-KKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred --hhhH----------------hhhCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 2233 799999999999999999998 788999999999999999999999875
No 17
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=8.1e-43 Score=358.61 Aligned_cols=304 Identities=15% Similarity=0.187 Sum_probs=233.4
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhhCCCcCeeE--EeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~--~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
++++|.+++.|+|+++++++|+.+..+.+++++. +|+.+|+ ++.++|++.+|+++|+++||+++|++++|||+||+
T Consensus 46 ~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~~R~--~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~ 123 (379)
T PLN02326 46 SGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIRNRR--VLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLL 123 (379)
T ss_pred CCcEEEEEEEECCCceecHHHHHHhcCCchhheecccCcceEe--ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 6799999999999999999999999887777763 5776665 55788999999999999999999999999999999
Q ss_pred EeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-cccCCCC---
Q 012253 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-VYAEGPA--- 160 (467)
Q Consensus 85 ~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~-~y~~~~~--- 160 (467)
+|+++++. ++.+.+|++.||+ +++.++|++++|+|++.||++|..+|++|.. ++||||++|.. ++.++.+
T Consensus 124 ~s~~~~~~-~~~a~~v~~~LG~---~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~--~~vLVv~~e~~s~~~~~~d~~~ 197 (379)
T PLN02326 124 CTSSPDDL-FGSAPQVQAALGC---TNALAFDLTAACSGFVLGLVTAARFIRGGGY--KNVLVIGADALSRYVDWTDRGT 197 (379)
T ss_pred EeCCCCcc-CcHHHHHHHHhCC---CCCceeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEechhcCCCCccccCc
Confidence 99988874 4679999999997 5789999999999999999999999999954 99999999997 5544433
Q ss_pred CCccccceeEEEecCCCC----c-eeecccccccccCc----ccc-----cccC----------CCCCCceecCcchHHH
Q 012253 161 RPTGGAAAVAMLIGPDAP----I-AFESKLRGSHMSHA----YDF-----YKPN----------LASEYPVVDGKLSQTC 216 (467)
Q Consensus 161 ~~t~GdGAvA~Ll~~~~~----~-~~~~~~~~~~~~~~----~df-----~~p~----------~~~~~~~vdG~~s~~~ 216 (467)
..+|||||+|+||++.+. + .+.....+.+.... .+. ..|. .+..+..++|+..
T Consensus 198 ~~lfGDGAaAvlL~~~~~~~~~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v--- 274 (379)
T PLN02326 198 CILFGDGAGAVVLQACDDDEDGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEV--- 274 (379)
T ss_pred eEEEcceeEEEEEEEcCCCCCceEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHH---
Confidence 347899999999998642 1 11100011110000 000 0000 0001133555544
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchh
Q 012253 217 YLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVES 296 (467)
Q Consensus 217 y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~ 296 (467)
|..++....+.+.+.+ ++++++.+|||+|++||++.++++.+.++| |+++++.
T Consensus 275 ~~~~~~~~~~~i~~~L---~~~gl~~~dId~~v~Hq~n~~~~~~~~~~L------------------------gl~~ek~ 327 (379)
T PLN02326 275 FKFAVRCVPQVIESAL---QKAGLTAESIDWLLLHQANQRIIDAVAQRL------------------------GIPPEKV 327 (379)
T ss_pred HHHHHHHHHHHHHHHH---HHcCCCHHHCCEEEECCCCHHHHHHHHHHc------------------------CCCHHHe
Confidence 3333333322222222 456799999999999999999999988887 7887754
Q ss_pred hhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEE
Q 012253 297 YQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQL 374 (467)
Q Consensus 297 ~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~ 374 (467)
. .+ .+++|||+|||+|++|++++++ +.+++||+|+|++||+|+++++.+++|
T Consensus 328 ~---------~~----------------l~~~GNt~sAsi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 328 I---------SN----------------LANYGNTSAASIPLALDEAVRS-GKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred e---------ec----------------HhhcCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 2 11 2799999999999999999998 788999999999999999999999876
No 18
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=1.3e-42 Score=349.05 Aligned_cols=304 Identities=20% Similarity=0.235 Sum_probs=240.9
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhhCCCcCeeE--EeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~--~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
|.++|.++++|+|+++++++++++..+.+..++. .|+.+|+ ++.+++++.+|+.+|++++|+++|++|++||.|++
T Consensus 1 ~~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~--~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~ 78 (318)
T TIGR00747 1 MYAGILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERR--IAADDETSSTMGFEAAKRAIENAGISKDDIDLIIV 78 (318)
T ss_pred CCCEEEEEEEECCCceecHHHHHHhcCCchHHeecccCceEEE--ECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 4699999999999999999999999887666553 4665555 66789999999999999999999999999999999
Q ss_pred EeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-ccCCC---C
Q 012253 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-YAEGP---A 160 (467)
Q Consensus 85 ~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-y~~~~---~ 160 (467)
+++++.+..|+.+.+|++.||+ +++.++++.++|++++.||+.|.++|++|.. +++|||++|... ..++. .
T Consensus 79 ~~~~~~~~~~~~a~~l~~~lGl---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~~Lvv~~e~~~~~~~~~~~~~ 153 (318)
T TIGR00747 79 ATTTPDHAFPSAACMVQAYLGI---KGIPAFDLSAACAGFIYALSVAKQYIESGKY--KTVLVVGAEKLSSTLDWTDRGT 153 (318)
T ss_pred ECCCCCCCCChHHHHHHHHhCC---CCCcEeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCcCCCCe
Confidence 9999888789999999999998 5688999999999999999999999999965 999999999872 22222 2
Q ss_pred CCccccceeEEEecCCCC-ceeecccccccccCccc-ccccC------CCCCCceecCcchHHHHHHHHHHHHHHHHHHH
Q 012253 161 RPTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYD-FYKPN------LASEYPVVDGKLSQTCYLMALDSCYKYFCQKF 232 (467)
Q Consensus 161 ~~t~GdGAvA~Ll~~~~~-~~~~~~~~~~~~~~~~d-f~~p~------~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~ 232 (467)
..++||||+|+||++++. ..+..-...+... ..| ++.|. ....+..+++......+.+.+.++++.+++
T Consensus 154 ~~~~GDGAaA~lL~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-- 230 (318)
T TIGR00747 154 CVLFGDGAGAVVLGESEDPGGIISTHLGADGT-QGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLE-- 230 (318)
T ss_pred EEEEecceeEEEEeecCCCCcEEEEEEEEcCC-CcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHH--
Confidence 356899999999998763 2111101111111 112 22222 122345566766655566655555555554
Q ss_pred HhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHH
Q 012253 233 EKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQ 312 (467)
Q Consensus 233 ~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~ 312 (467)
++++.++|||+|++|+++.++++++.+.| |+|+++.+ .++
T Consensus 231 ----~~g~~~~di~~~~~h~~~~~~~~~~~~~l------------------------gi~~~k~~---------~~~--- 270 (318)
T TIGR00747 231 ----ANGLDPEDIDWFVPHQANLRIIEALAKRL------------------------ELDMSQVV---------KTV--- 270 (318)
T ss_pred ----HcCCCHHHCCEEEECCCCHHHHHHHHHHc------------------------CCCHHHee---------ehH---
Confidence 44789999999999999999999998887 78877543 122
Q ss_pred HhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEE
Q 012253 313 LYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQL 374 (467)
Q Consensus 313 ~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~ 374 (467)
+++||+++||++++|++++++ +.+.+||+|++++||+|+++++.+++|
T Consensus 271 -------------~~~Gn~~sas~~~~L~~~~~~-~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 271 -------------HKYGNTSAASIPLALDELLRT-GRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred -------------hhhCCHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 689999999999999999998 788999999999999999999999986
No 19
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=1.8e-42 Score=351.19 Aligned_cols=307 Identities=16% Similarity=0.116 Sum_probs=232.4
Q ss_pred CceeEEeEEEEecCCceeehhHHhhhhCCCcCeeE--EeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEE
Q 012253 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLE 83 (467)
Q Consensus 6 ~~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~--~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li 83 (467)
||+|+|.++++|+|+++|++++|++..|.+.+++. +|+.+|+ ++.++|+..+|+++|++++|+++|++|++||+||
T Consensus 2 ~~~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~--~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li 79 (339)
T PRK06840 2 EMNVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVIEKFGIYEKP--VPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVI 79 (339)
T ss_pred CCceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHhhhcCcceEe--eCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 57899999999999999999999999998877774 4555554 6688899999999999999999999999999999
Q ss_pred EEec-cCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHh-CCCCCCEEEEEEeecc-cccCC--
Q 012253 84 VGSE-TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVES-ASWDGRYGLVVCTDSA-VYAEG-- 158 (467)
Q Consensus 84 ~~Te-s~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a-~~~~~~~aLVV~sD~~-~y~~~-- 158 (467)
++++ ++++..|+.+++|++.||+ +++.++|+.++|+|++.||.+|.++|++ +.. +++|||++|.. .+.+.
T Consensus 80 ~~~~~~~~~~~p~~a~~l~~~lGl---~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~--~~~Lvv~~~~~s~~~~~~~ 154 (339)
T PRK06840 80 YIGSEHKDYPVWSSAPKIQHEIGA---KNAWAFDIMAVCASFPIALKVAKDLLYSDPSI--ENVLLVGGYRNSDLVDYDN 154 (339)
T ss_pred EeccCCCCCCCCchHHHHHHHhCC---CCcccccccccchHHHHHHHHHHHHHhcCCCc--cEEEEEeecccccccCcCC
Confidence 8765 4556689999999999998 5788999999999999999999999999 654 89999999986 32222
Q ss_pred -CCC--CccccceeEEEecCCCC-ceeecccccccccCcccccccCCCCC-------------CceecCcchHHHHHH--
Q 012253 159 -PAR--PTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLASE-------------YPVVDGKLSQTCYLM-- 219 (467)
Q Consensus 159 -~~~--~t~GdGAvA~Ll~~~~~-~~~~~~~~~~~~~~~~df~~p~~~~~-------------~~~vdG~~s~~~y~~-- 219 (467)
... .+|||||+|+||++++. ..+......+.......+..|..+.. +..+.+...+...+.
T Consensus 155 ~~~~~~~~~GDgAaA~ll~~~~~~~~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (339)
T PRK06840 155 PRTRFMFNFAAGGSAALLKKDAGKNRILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEV 234 (339)
T ss_pred CCeeeeccCCCceeEEEEEecCCCCceEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhh
Confidence 122 35799999999998764 22211011111111112222322211 111223322221111
Q ss_pred ---HHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchh
Q 012253 220 ---ALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVES 296 (467)
Q Consensus 220 ---a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~ 296 (467)
.+..+.+.++ .+++++++|||++++||++.++++...++| ++++++.
T Consensus 235 ~~~~~~~~i~~~L------~~~gl~~~did~~~~h~~~~~~~~~~~~~L------------------------gl~~~~~ 284 (339)
T PRK06840 235 SIPNFLKVIREAL------RKSGYTPKDIDYLAILHMKRSAHIALLEGL------------------------GLTEEQA 284 (339)
T ss_pred HHHHHHHHHHHHH------HHcCCCHHHCCEEEECCcCHHHHHHHHHHc------------------------CCCHHHe
Confidence 1223333333 456899999999999999999999888877 7777653
Q ss_pred hhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEec
Q 012253 297 YQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQE 376 (467)
Q Consensus 297 ~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~~ 376 (467)
+ +.+++|||+|+|++++|.+++++ +++++|++|+|+++|+|+++++.+++|.+
T Consensus 285 ~--------------------------~~~~~Gn~~sas~~~~L~~~~~~-~~~~~Gd~ill~~~G~G~s~~~~~l~~~~ 337 (339)
T PRK06840 285 I--------------------------YLDEYGHLGQLDQILSLHLALEQ-GKLKDGDLVVLVSAGTGYTWAATVIRWGP 337 (339)
T ss_pred E--------------------------eHHhccchhhhhHHHHHHHHHHc-CCCCCCCEEEEEEEehhhheeEEEEEecC
Confidence 1 23799999999999999999987 77889999999999999999999999975
No 20
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=1.3e-42 Score=349.02 Aligned_cols=303 Identities=19% Similarity=0.210 Sum_probs=239.0
Q ss_pred eeEEeEEEEecCCceeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEec
Q 012253 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (467)
Q Consensus 8 ~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Te 87 (467)
+++|.+++.|+|+++++++|+.+..+.+.+++....|.+++.++.+++++.+|+++|++++|+++|+++++||.||++|+
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~ 80 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS 80 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcCCCHHHhhhccCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 58999999999999999999999998887777433444444466788999999999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-cccCC---CCCCc
Q 012253 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-VYAEG---PARPT 163 (467)
Q Consensus 88 s~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~-~y~~~---~~~~t 163 (467)
++.+..|+.+.+|++.||+ +++.++++.++|++++.||..|.++|++|.. ++||||++|.. ...+. ....+
T Consensus 81 ~~~~~~~~~~~~l~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~~~~ 155 (320)
T cd00830 81 TPDYLFPATACLVQARLGA---KNAAAFDINAACSGFLYGLSTAAGLIRSGGA--KNVLVVGAETLSRILDWTDRSTAVL 155 (320)
T ss_pred CCCCCCCcHHHHHHHHhCC---CCCcEeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCceEE
Confidence 9988789999999999998 4789999999999999999999999999954 99999999997 22222 23567
Q ss_pred cccceeEEEecCCCC-ceeeccccccccc--Ccccc-----cccC----CCCCCceecCcchHHHHHHHHHHHHHHHHHH
Q 012253 164 GGAAAVAMLIGPDAP-IAFESKLRGSHMS--HAYDF-----YKPN----LASEYPVVDGKLSQTCYLMALDSCYKYFCQK 231 (467)
Q Consensus 164 ~GdGAvA~Ll~~~~~-~~~~~~~~~~~~~--~~~df-----~~p~----~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~ 231 (467)
+||||+|+||++.+. ..+......+... +...+ .+|. ....+..++++.....+.+.+..+++.++++
T Consensus 156 ~GDgAaA~ll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 235 (320)
T cd00830 156 FGDGAGAVVLEATEEDPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEK 235 (320)
T ss_pred EeccceEEEEEecCCCCcEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHH
Confidence 899999999998764 2211111111111 11111 1110 0112345677777666666666666666554
Q ss_pred HHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHH
Q 012253 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAK 311 (467)
Q Consensus 232 ~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~ 311 (467)
+++.++|||+|++||++.++++++.++| |+++++.+ .++
T Consensus 236 ------~g~~~~di~~~~~h~~~~~~~~~~~~~l------------------------gl~~~~~~---------~~~-- 274 (320)
T cd00830 236 ------AGLTPDDIDWFVPHQANLRIIEAVAKRL------------------------GLPEEKVV---------VNL-- 274 (320)
T ss_pred ------cCCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCCHHHhh---------hhH--
Confidence 4699999999999999999999988877 77776532 222
Q ss_pred HHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEE
Q 012253 312 QLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFS 371 (467)
Q Consensus 312 ~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~ 371 (467)
+++||++|+|+|++|.+++++ +++++|++|+|+++|+|+++++.+
T Consensus 275 --------------~~~Gn~~sas~~~~L~~~~~~-~~~~~G~~vll~~~G~G~~~~~~l 319 (320)
T cd00830 275 --------------DRYGNTSAASIPLALDEAIEE-GKLKKGDLVLLLGFGAGLTWGAAL 319 (320)
T ss_pred --------------HhhCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchHHhhHHhh
Confidence 799999999999999999998 788899999999999999998764
No 21
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=3.6e-42 Score=351.96 Aligned_cols=305 Identities=19% Similarity=0.226 Sum_probs=229.8
Q ss_pred eEEeEEEEecCCceeehhHHhhhhCC--Cc----------Cee--EEeccceEeeccC-CC-------------------
Q 012253 9 VGILALDIYFPPTCVLQEALEVHDGV--SK----------GKY--TVGLGQDCMAFCS-EV------------------- 54 (467)
Q Consensus 9 vgI~ai~~y~P~~~v~~~el~~~~g~--~~----------~k~--~~Gig~r~~av~~-~~------------------- 54 (467)
+.|.+++.|+|++.++|+++.+..+. +. .++ .+||.+|++..+. ++
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDIA 81 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchhhH
Confidence 68999999999999999999998652 11 233 3799999987541 11
Q ss_pred -CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC-CcChHHHHHHHHHH
Q 012253 55 -EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCV 132 (467)
Q Consensus 55 -Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~-~aC~gg~~AL~~A~ 132 (467)
|++.+||++|+++||+++|++|++||+||++|+++ +..|+++.+|+++||+ .+++.+||++ +||+|++.||++|.
T Consensus 82 ~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl--~~~~~~~dv~~~~C~~~~~al~~A~ 158 (361)
T cd00831 82 LEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGL--RPDVKRYNLGGMGCSAGAIALDLAK 158 (361)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCC--CcccchhccccccchhHHHHHHHHH
Confidence 36899999999999999999999999999999987 5699999999999998 5679999998 89999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc-c-ccCCC------CCCccccceeEEEecCCCCcee--e--cccccccccCcccc----
Q 012253 133 NWVESASWDGRYGLVVCTDSA-V-YAEGP------ARPTGGAAAVAMLIGPDAPIAF--E--SKLRGSHMSHAYDF---- 196 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~-~-y~~~~------~~~t~GdGAvA~Ll~~~~~~~~--~--~~~~~~~~~~~~df---- 196 (467)
++++++. .++||||++|.. . +.... ...+|||||+|+||++++.... . ....++++....+.
T Consensus 159 ~~~~~~~--~~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 236 (361)
T cd00831 159 DLLEANP--GARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAM 236 (361)
T ss_pred HHHHHCC--CCEEEEEEeecccceeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCCce
Confidence 9999994 499999999997 2 22221 2467999999999998764210 0 01122222111111
Q ss_pred -cccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcC--CCCccccceeccCCchHHHHHHHHHhhhhhhhccc
Q 012253 197 -YKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGR--QFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRN 273 (467)
Q Consensus 197 -~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~--~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~ 273 (467)
|++.. ..+..+.++.....+...+..+++.++ +++ +++.+|||+|++||++.++++.+.++|
T Consensus 237 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~i~~~L------~~~~~g~~~~did~~~~H~~~~~i~~~v~~~l-------- 301 (361)
T cd00831 237 GWHLGE-EGLTFVLSRDVPRLVEKNLERVLRKLL------ARLGIGLFKLAFDHWCVHPGGRAVLDAVEKAL-------- 301 (361)
T ss_pred EEEEEc-ceEEEEeChhHHHHHHHHHHHHHHHHh------ccccCCCccccceEEEECCCChHHHHHHHHHc--------
Confidence 11110 112223333333334444444444443 445 788999999999999999999988877
Q ss_pred cCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCC
Q 012253 274 ASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEG 353 (467)
Q Consensus 274 ~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G 353 (467)
|+++++. .+|+.+.+++|||+|||+|++|.+++++ +++++|
T Consensus 302 ----------------gl~~~~~----------------------~~s~~~l~~~GN~~sasi~~~L~~~~~~-g~~~~G 342 (361)
T cd00831 302 ----------------GLSPEDL----------------------EASRMVLRRYGNMSSSSVLYVLAYMEAK-GRVKRG 342 (361)
T ss_pred ----------------CCCHHHH----------------------HHHHHHHHHhCCchhccHHHHHHHHHHh-CCCCCC
Confidence 7777643 1222334899999999999999999998 788899
Q ss_pred CEEEEEEeccccceeeEEE
Q 012253 354 KRVIMFSYGSGLTATMFSL 372 (467)
Q Consensus 354 ~~ill~syGsG~~~~~~~~ 372 (467)
++|+|++||+|++++++++
T Consensus 343 d~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 343 DRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CEEEEEEEcCCceeeeeeC
Confidence 9999999999999998763
No 22
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=4.4e-42 Score=353.58 Aligned_cols=311 Identities=16% Similarity=0.163 Sum_probs=230.9
Q ss_pred CCceeEEeEEEEecCCceeehhHHhhhh----CCCcCe-------e--EEeccceEeeccCC------------------
Q 012253 5 HPKNVGILALDIYFPPTCVLQEALEVHD----GVSKGK-------Y--TVGLGQDCMAFCSE------------------ 53 (467)
Q Consensus 5 ~~~~vgI~ai~~y~P~~~v~~~el~~~~----g~~~~k-------~--~~Gig~r~~av~~~------------------ 53 (467)
+|..+.|.+|+.|+|++.++|+|+.+.. +.+..+ + ++||.+|+++...+
T Consensus 18 ~~~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (391)
T PLN03169 18 NPGKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQ 97 (391)
T ss_pred CCCCeEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHH
Confidence 3567999999999999999999998852 212222 2 37999999764221
Q ss_pred -----CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCe-eEEeeCCcChHHHHH
Q 012253 54 -----VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAA 127 (467)
Q Consensus 54 -----~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~-~~~di~~aC~gg~~A 127 (467)
+|++.+||++|+++||+++|++|+|||+||++|+| ++..|+++.+|+++||+ ++.+ +++|+..||+|+++|
T Consensus 98 r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~l~~~LGl--~~~~~~~~d~~~gC~g~~~a 174 (391)
T PLN03169 98 RLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EARLPGGDLYLAKQLGL--SPDVQRVMLYFLGCSGGVAG 174 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCCCCcHHHHHHHHhCc--CCcceeeecccChhHHHHHH
Confidence 56789999999999999999999999999999986 66799999999999998 5566 589999999999999
Q ss_pred HHHHHHHHHhCCCCCCEEEEEEeeccc--ccC-----C---CCCCccccceeEEEecCCCCc-----eeeccccccc---
Q 012253 128 LFNCVNWVESASWDGRYGLVVCTDSAV--YAE-----G---PARPTGGAAAVAMLIGPDAPI-----AFESKLRGSH--- 189 (467)
Q Consensus 128 L~~A~~~l~a~~~~~~~aLVV~sD~~~--y~~-----~---~~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~~~~--- 189 (467)
|.+|.+|++++ +.++||||++|.+. +.. . ....+|||||+|+||++++.. .++....++.
T Consensus 175 L~~A~~~~~~~--~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~ip 252 (391)
T PLN03169 175 LRVAKDIAENN--PGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFLP 252 (391)
T ss_pred HHHHHHHHHhC--CCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEcC
Confidence 99999999999 45999999999972 221 1 124679999999999986421 1111001110
Q ss_pred -ccCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccc--eeccCCchHHHHHHHHHhhh
Q 012253 190 -MSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVD--YFVFHSPYNKLVQKSFARLF 266 (467)
Q Consensus 190 -~~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d--~~i~H~p~~k~~~k~~~~l~ 266 (467)
+.+.+++... ...+..++|+.........+..+.+.++ ++++++.+|+| +|++||++.+|++.+.++|
T Consensus 253 ~~~~~~~~~~~--~~g~~~~~g~~v~~~~~~~~~~~i~~~L------~~~gl~~~did~~~~v~Hq~n~~il~~v~~~L- 323 (391)
T PLN03169 253 GTEKTIDGRLT--EEGINFKLGRELPQKIEDNIEGFCKKLM------KKAGLVEKDYNDLFWAVHPGGPAILNRLEKKL- 323 (391)
T ss_pred CCccccCceec--CCceEEEECcHHHHHHHHHHHHHHHHHH------HHcCCCCCCCCcceEEecCCCHHHHHHHHHHc-
Confidence 0000111000 0112335566654444444444444444 44578888899 9999999999999999888
Q ss_pred hhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhh
Q 012253 267 FNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHE 346 (467)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~ 346 (467)
|+++++.. .|+.+.+++|||+|||+|++|..++++
T Consensus 324 -----------------------gl~~ek~~----------------------~s~~~l~~~GNtsSasip~~L~~~~~~ 358 (391)
T PLN03169 324 -----------------------KLAPEKLE----------------------CSRRALMDYGNVSSNTIVYVLEYMREE 358 (391)
T ss_pred -----------------------CCCHHHHH----------------------HHHHHHHHhCCchHhHHHHHHHHHHHh
Confidence 78877531 122234899999999999999999876
Q ss_pred cCcCC---CCCEEEEEEeccccceeeEEEEEe
Q 012253 347 KHSSL---EGKRVIMFSYGSGLTATMFSLQLQ 375 (467)
Q Consensus 347 ~~~~~---~G~~ill~syGsG~~~~~~~~~~~ 375 (467)
++++ +|++++|++||+|+++++.+++|.
T Consensus 359 -~~~~~~~~gd~~ll~afG~G~s~~~~ll~~~ 389 (391)
T PLN03169 359 -LKKKGEEDEEWGLILAFGPGITFEGILARNL 389 (391)
T ss_pred -hcccCCCCCcEEEEEEEcccHhHHHHHHhhh
Confidence 5543 689999999999999999998863
No 23
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.6e-41 Score=337.95 Aligned_cols=306 Identities=20% Similarity=0.213 Sum_probs=241.8
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhhCCCcCee--EEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKY--TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
+.|+|.++++|+|+++++++++.+..+.+..++ ++|+..|+ ++.++++..+|+.+|++++|+++|+++++||.|++
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~--~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~ 79 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERR--IAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIV 79 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhhhhcCeEEEE--eCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 579999999999999999999999988766555 35676665 55788999999999999999999999999999999
Q ss_pred EeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-ccCCCC---
Q 012253 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-YAEGPA--- 160 (467)
Q Consensus 85 ~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-y~~~~~--- 160 (467)
+|+++....|+.+.+|+..||+ .++.++++.++|++++.||..|..+|++|.. ++||||++|.+. ..+...
T Consensus 80 ~~~~~~~~~~~~~~~i~~~lG~---~~~~~~~v~~~Casg~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~ 154 (319)
T PRK09352 80 ATTTPDYAFPSTACLVQARLGA---KNAAAFDLSAACSGFVYALSTADQFIRSGAY--KNVLVIGAEKLSRIVDWTDRST 154 (319)
T ss_pred EcCCCCCCCchHHHHHHHHhCC---CCCcEeeccccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCc
Confidence 9999887789999999999997 6688999999999999999999999999955 999999999872 222222
Q ss_pred CCccccceeEEEecCCCCceeecccccccccCcccccccCCCC------CCceecCcchHHHHHHHHHHHHHHHHHHHHh
Q 012253 161 RPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLAS------EYPVVDGKLSQTCYLMALDSCYKYFCQKFEK 234 (467)
Q Consensus 161 ~~t~GdGAvA~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~------~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~ 234 (467)
...+||||+|+||++++.-.+..-...+.......+..|..+. .+..++|+.....+...+.++++.++++
T Consensus 155 ~~~~gDGaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--- 231 (319)
T PRK09352 155 CVLFGDGAGAVVLGASEEPGILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEA--- 231 (319)
T ss_pred eEEEeccceEEEEEEcCCCCeEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHH---
Confidence 3478999999999987531111001111111111123343222 1345677766556666666666655544
Q ss_pred hhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHh
Q 012253 235 LEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLY 314 (467)
Q Consensus 235 ~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~ 314 (467)
++++++|||+|++|+++.++++...+.| ++|+++.. .++
T Consensus 232 ---~g~~~~di~~~~~h~~~~~~~~~~~~~l------------------------g~~~~~~~---------~~~----- 270 (319)
T PRK09352 232 ---AGLTPEDIDWLVPHQANLRIIDATAKKL------------------------GLPMEKVV---------VTV----- 270 (319)
T ss_pred ---cCCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCCHHHhh---------hhH-----
Confidence 4689999999999999999999988877 77776431 122
Q ss_pred hhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEe
Q 012253 315 DLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQ 375 (467)
Q Consensus 315 ~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~ 375 (467)
.++||++++|++++|++++++ +++++|++|+++|+|+|+++++++++|+
T Consensus 271 -----------~~~Gn~~~a~~~~~L~~~~~~-g~~~~Gd~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 271 -----------DKYGNTSAASIPLALDEAVRD-GRIKRGDLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred -----------HhhCCHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhheeEEEEEEeC
Confidence 689999999999999999998 7888999999999999999999999985
No 24
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.4e-41 Score=345.64 Aligned_cols=315 Identities=18% Similarity=0.198 Sum_probs=232.3
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhhCCCcC-------ee--EEeccceEeeccC---CCCCHHHHHHHHHHHHHHHcCC
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKG-------KY--TVGLGQDCMAFCS---EVEDVISMSLTVVTSLLEKYKI 74 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~g~~~~-------k~--~~Gig~r~~av~~---~~Ed~~~ma~~Aa~~aL~~agi 74 (467)
|+|+|.+++.|+|+++|++++++++.+..++ ++ .+||.+|+++.++ +.++..+|+++|+++||+++|+
T Consensus 1 ~~v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi 80 (378)
T PRK06816 1 MNVYITSTGAFLPGEPVSNDEMEAYLGLINGKPSRARRIILRNNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGF 80 (378)
T ss_pred CCeEEEeeeecCCCCccCHHHHHHHHhhccCCcHHHHHHHHHhCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999988764322 33 3799999876543 2358899999999999999999
Q ss_pred CcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-
Q 012253 75 DPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA- 153 (467)
Q Consensus 75 ~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~- 153 (467)
+|+|||+||++|.+++...|+.+.+|++.||+ +++.++++.++|+|++.||+.|..+|++|.. ++||||++|.+
T Consensus 81 ~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl---~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~--~~vLvv~~E~~s 155 (378)
T PRK06816 81 SLGDIELLACGTSQPDQLMPGHASMVHGELGA---PPIEVVSSAGVCAAGMMALKYAYLSVKAGES--RNAVATASELAS 155 (378)
T ss_pred CHHHCCEEEEEECCCCcCChHHHHHHHhhCCC---CCCceeeecCcCHHHHHHHHHHHHHHHCCCC--CEEEEEeEccch
Confidence 99999999999999887789999999999997 5578999999999999999999999999955 99999999997
Q ss_pred cccCC----------------CC--------CCccccceeEEEecCCCC---cee--ecccccccccCc-----------
Q 012253 154 VYAEG----------------PA--------RPTGGAAAVAMLIGPDAP---IAF--ESKLRGSHMSHA----------- 193 (467)
Q Consensus 154 ~y~~~----------------~~--------~~t~GdGAvA~Ll~~~~~---~~~--~~~~~~~~~~~~----------- 193 (467)
+..+. +. ..++||||+|+||++.+. +.+ .....+++..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~ 235 (378)
T PRK06816 156 RWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGLSLRIDWIDLRSYAGELPVCMYAGAEKN 235 (378)
T ss_pred hhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCceEEEEEEeeecccccCccceecCCccC
Confidence 22110 11 126899999999997653 111 110111121111
Q ss_pred ----ccccccCCCCCCceecCcchHHHHHHHHHHHHH-----HHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHh
Q 012253 194 ----YDFYKPNLASEYPVVDGKLSQTCYLMALDSCYK-----YFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFAR 264 (467)
Q Consensus 194 ----~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~-----~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~ 264 (467)
...|++.. .+.+..+|+..+..+...+.+.+. .+.+.+ ++++++++|||+|++||++.+|++.+.++
T Consensus 236 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L---~~~gl~~~DId~~v~Hq~n~~~~~~v~~~ 311 (378)
T PRK06816 236 EDGSLKGWSDYP-PEEAEAASALSLKQDVRLLNENIVVYTIKPLLELV---DKRNLDPDDIDYFLPHYSSEYFREKIVEL 311 (378)
T ss_pred CCCCccCcccCC-HHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHH---HHcCCChhhCCEEeeCcccHHHHHHHHHH
Confidence 01122110 011123344433333333332221 122222 56689999999999999999999999988
Q ss_pred hhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHH
Q 012253 265 LFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLL 344 (467)
Q Consensus 265 l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l 344 (467)
|--. .+ |+|+++.+ .+ ..++||++|||+|++|++++
T Consensus 312 l~~~---------------~~----gl~~~k~~---------~~----------------~~~~GNt~sAsipi~L~~a~ 347 (378)
T PRK06816 312 LAKA---------------GF----MIPEEKWF---------TN----------------LATVGNTGSASIYIMLDELL 347 (378)
T ss_pred HHhc---------------cC----CCChhheE---------Ee----------------ccccccccchHHHHHHHHHH
Confidence 7100 01 67777543 12 27999999999999999999
Q ss_pred hhcCcCCCCCEEEEEEeccc-cceeeEEEEEe
Q 012253 345 HEKHSSLEGKRVIMFSYGSG-LTATMFSLQLQ 375 (467)
Q Consensus 345 ~~~~~~~~G~~ill~syGsG-~~~~~~~~~~~ 375 (467)
++ +++++||+|+++++||| +..++++++|+
T Consensus 348 ~~-g~~~~Gd~vl~~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 348 NS-GRLKPGQKILCFVPESGRFSTAFMLLTVV 378 (378)
T ss_pred Hc-CCCCCCCEEEEEEecccchhheeEEEEEC
Confidence 98 88999999999999987 99999999984
No 25
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=9.6e-39 Score=321.47 Aligned_cols=304 Identities=37% Similarity=0.510 Sum_probs=228.8
Q ss_pred eeEEeEEEEecCCceeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEec
Q 012253 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (467)
Q Consensus 8 ~vgI~ai~~y~P~~~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Te 87 (467)
.|+|.++++|+|+++++++++++..+.+.-...+|+.+|++. .++++..+|+++|++++|+++|+++++||.|+++++
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~~~~~~~~~~gi~~r~~~--~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~ 78 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVDPGKYTTGIGQRHMA--GDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHhCCCcceeeeecceeEec--CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 479999999999999999999999887633445789988865 457999999999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccccc---CCCCCCcc
Q 012253 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYA---EGPARPTG 164 (467)
Q Consensus 88 s~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~---~~~~~~t~ 164 (467)
++.+..|+.+.+|++.||+ +++.++++.++|++++.||..|..+|++|.. +++|||++|.+... ......++
T Consensus 79 ~~~~~~~~~~~~i~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vlvv~~e~~~~~~~~~~~~~~~~ 153 (324)
T cd00827 79 SPIDKGKSAATYLAELLGL---TNAEAFDLKQACYGGTAALQLAANLVESGPW--RYALVVASDIASYLLDEGSALEPTL 153 (324)
T ss_pred CCCCCCccHHHHHHHHcCC---CCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEEHHhhhcccCCCCccccc
Confidence 9887789999999999998 4899999999999999999999999999955 99999999998322 23356789
Q ss_pred ccceeEEEecCCCC---ceeecccccccccC------cccccccCC----CCCCceecC--cchHHHHHHHHHHHHHHHH
Q 012253 165 GAAAVAMLIGPDAP---IAFESKLRGSHMSH------AYDFYKPNL----ASEYPVVDG--KLSQTCYLMALDSCYKYFC 229 (467)
Q Consensus 165 GdGAvA~Ll~~~~~---~~~~~~~~~~~~~~------~~df~~p~~----~~~~~~vdG--~~s~~~y~~a~~~~~~~~~ 229 (467)
||||+|+||++++. ..+......+.... ..++..+.. .......++ ......+...+..+.+..+
T Consensus 154 gdgaaA~ll~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (324)
T cd00827 154 GDGAAAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKAL 233 (324)
T ss_pred cCceEEEEEecCcccccCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHH
Confidence 99999999998864 22221111111110 111111100 000011233 2222233333444443333
Q ss_pred HHHHhhhcCCCCccccceeccCCchH-HHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHH
Q 012253 230 QKFEKLEGRQFSMLDVDYFVFHSPYN-KLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQ 308 (467)
Q Consensus 230 ~~~~~~~~~~~~~~d~d~~i~H~p~~-k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~ 308 (467)
++.+++ +|+|+|++||++. ++++...++| +++.++...++.
T Consensus 234 ------~~~~~~-~~i~~~~~h~~~~~~~~~~~~~~l------------------------~~~~~~~~~~~~------- 275 (324)
T cd00827 234 ------DRAGLS-EDIDYFVPHQPNGKKILEAVAKKL------------------------GGPPEKASQTRW------- 275 (324)
T ss_pred ------HHcccc-cccceeeccCchHHHHHHHHHHHc------------------------cchHhhhccchh-------
Confidence 344677 8999999999999 9999988887 454443221100
Q ss_pred HHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEE
Q 012253 309 VAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFS 371 (467)
Q Consensus 309 ~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~ 371 (467)
.+.+++||+++||+|++|.+++++ +++++|++|+++|+|+|+++++++
T Consensus 276 --------------~~~~~~Gn~~sa~~~~~L~~~~~~-~~~~~Gd~vl~~~~G~G~~~~~~~ 323 (324)
T cd00827 276 --------------ILLRRVGNMYAASILLGLASLLES-GKLKAGDRVLLFSYGSGFTAEAFV 323 (324)
T ss_pred --------------hHHHHhCchHHHHHHHHHHHHHhc-CCCCCCCEEEEEEeccchhheecc
Confidence 133899999999999999999998 778899999999999999998865
No 26
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=334.71 Aligned_cols=311 Identities=18% Similarity=0.243 Sum_probs=224.4
Q ss_pred eeEEeEEEEecCCceeehhHHhhhh-C--CCcC---------ee--EEeccceEeeccCC--------------------
Q 012253 8 NVGILALDIYFPPTCVLQEALEVHD-G--VSKG---------KY--TVGLGQDCMAFCSE-------------------- 53 (467)
Q Consensus 8 ~vgI~ai~~y~P~~~v~~~el~~~~-g--~~~~---------k~--~~Gig~r~~av~~~-------------------- 53 (467)
.+.|.+++.|+|+++++|+++++.. . .+.+ ++ ++||.+|++...+.
T Consensus 22 ~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~ 101 (399)
T PLN03171 22 LAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLDARL 101 (399)
T ss_pred CcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHHHHH
Confidence 4789999999999999999999873 2 1222 23 47999998754310
Q ss_pred ---CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCe-eEEeeCCcChHHHHHHH
Q 012253 54 ---VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALF 129 (467)
Q Consensus 54 ---~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~-~~~di~~aC~gg~~AL~ 129 (467)
.|.+.+||++|+++||+++|++++|||+||++|+|+++ .|+++.+|+++||+ +..+ +++++.+||+|+++||+
T Consensus 102 ~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl--~~~~~~~~~~~~gC~g~~~aL~ 178 (399)
T PLN03171 102 DIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGL--RPSVRRTMLHLNGCFAGAAALR 178 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCC--CcccceeeccCCccHHHHHHHH
Confidence 04799999999999999999999999999999999986 89999999999998 4444 36788889999999999
Q ss_pred HHHHHHHhCCCCCCEEEEEEeecc-cccCCCC---------CCccccceeEEEecCCCC------ceeeccccccccc--
Q 012253 130 NCVNWVESASWDGRYGLVVCTDSA-VYAEGPA---------RPTGGAAAVAMLIGPDAP------IAFESKLRGSHMS-- 191 (467)
Q Consensus 130 ~A~~~l~a~~~~~~~aLVV~sD~~-~y~~~~~---------~~t~GdGAvA~Ll~~~~~------~~~~~~~~~~~~~-- 191 (467)
+|.+|++++. .++||||++|.+ ++-++++ ..+|||||+|+||++.+. +.+......+...
T Consensus 179 ~A~~li~~~~--~~~vLVv~~e~~s~~~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~~p~~~ 256 (399)
T PLN03171 179 LAKDLAENNR--GARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAIIPESD 256 (399)
T ss_pred HHHHHHHhCC--CCeEEEEEEeccccccCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEEecCCc
Confidence 9999999994 499999999997 3333322 247899999999998642 1121100000000
Q ss_pred CcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHH-Hhh--hcCCCCccccceeccCCchHHHHHHHHHhhhhh
Q 012253 192 HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKF-EKL--EGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268 (467)
Q Consensus 192 ~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~-~~~--~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~ 268 (467)
+.+.+..+..+ ++++++.......+....+...++. ... ...++..+|++|+ +||++.+|++.+.++|
T Consensus 257 ~~~~~~~~~~g-----~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~Hq~~~~il~~v~~~L--- 327 (399)
T PLN03171 257 DAINMHFTEGG-----LDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VHPGSSAILDQVDAAL--- 327 (399)
T ss_pred hheEEEEEcCC-----ceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEE-EcCCcHHHHHHHHHHc---
Confidence 11111111111 2334443333334433333333221 000 1235778899887 5999999999999888
Q ss_pred hhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcC
Q 012253 269 DFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKH 348 (467)
Q Consensus 269 ~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~ 348 (467)
|+++++.. .|+.+.+++|||+|+|++++|..++++ +
T Consensus 328 ---------------------gl~~ek~~----------------------~s~~~l~~yGNtssaSip~~L~~~~~~-~ 363 (399)
T PLN03171 328 ---------------------GLEPEKLA----------------------ASRRVLSDYGNMFGATVIFALDELRRQ-M 363 (399)
T ss_pred ---------------------CCCHHHhH----------------------HHHHHHHHhCcchhhhHHHHHHHHHhh-H
Confidence 78877532 111223899999999999999999987 4
Q ss_pred c--CCCC---CEEEEEEeccccceeeEEEEEec
Q 012253 349 S--SLEG---KRVIMFSYGSGLTATMFSLQLQE 376 (467)
Q Consensus 349 ~--~~~G---~~ill~syGsG~~~~~~~~~~~~ 376 (467)
+ +++| ++|+|++||+|++|++.+++|..
T Consensus 364 ~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~~ 396 (399)
T PLN03171 364 EEAAAAGAWPELGVMMAFGPGLTVDAMLLHASG 396 (399)
T ss_pred hhcCCCCCCcceEEEEEEcccHHHHHHHhhccc
Confidence 3 4677 99999999999999999999864
No 27
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=7.6e-38 Score=321.45 Aligned_cols=309 Identities=16% Similarity=0.219 Sum_probs=222.2
Q ss_pred eeEEeEEEEecCCceeehhHHhhhhC----C-C-c--C-ee-----EEeccceEeeccC---C-C---------------
Q 012253 8 NVGILALDIYFPPTCVLQEALEVHDG----V-S-K--G-KY-----TVGLGQDCMAFCS---E-V--------------- 54 (467)
Q Consensus 8 ~vgI~ai~~y~P~~~v~~~el~~~~g----~-~-~--~-k~-----~~Gig~r~~av~~---~-~--------------- 54 (467)
.+.|.+|+..+|++.++|+|+.++.. . + + . ++ ..||..|++.+.+ + .
T Consensus 16 ~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 95 (393)
T PLN03172 16 PATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQ 95 (393)
T ss_pred CeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHHH
Confidence 36799999999999999999887742 1 1 1 1 12 3799999886621 0 0
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCee-EEeeCCcChHHHHHHH
Q 012253 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIE-GVDSTNACYGGTAALF 129 (467)
Q Consensus 55 ----Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~-~~di~~aC~gg~~AL~ 129 (467)
+.+.+||++|+++||+++|++++|||+||++|+|+.+ .|+++.+|+++||+ ++.+. .++++.||+|++.||.
T Consensus 96 ~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~-~P~~a~~l~~~LGl--~~~~~~~~~~~~gC~g~~~aL~ 172 (393)
T PLN03172 96 DMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGL--KPSVKRFMMYQQGCFAGGTVLR 172 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-CchHHHHHHHHhCC--CCCceEEeeeCCchHHHHHHHH
Confidence 1256999999999999999999999999999999976 89999999999998 56664 4788999999999999
Q ss_pred HHHHHHHhCCCCCCEEEEEEeeccc--ccCCC--------CCCccccceeEEEecCCCCceee-c--cccccc------c
Q 012253 130 NCVNWVESASWDGRYGLVVCTDSAV--YAEGP--------ARPTGGAAAVAMLIGPDAPIAFE-S--KLRGSH------M 190 (467)
Q Consensus 130 ~A~~~l~a~~~~~~~aLVV~sD~~~--y~~~~--------~~~t~GdGAvA~Ll~~~~~~~~~-~--~~~~~~------~ 190 (467)
+|.++++++ ++++||||++|++. +.+.. ....|||||+|+||++++.-.++ + .+.++. +
T Consensus 173 ~A~~~~~~~--~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t 250 (393)
T PLN03172 173 LAKDLAENN--AGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDS 250 (393)
T ss_pred HHHHHHHcC--CCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCC
Confidence 999999999 55999999999983 32221 13679999999999986421100 0 011111 1
Q ss_pred cCccccc-ccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhh
Q 012253 191 SHAYDFY-KPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND 269 (467)
Q Consensus 191 ~~~~df~-~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~ 269 (467)
.+.+.+. +.. +.. . .++...+..+.....+.+.+.+ .++++...|+|+|++||++.++++.+.++|
T Consensus 251 ~~~~~~~i~~~-G~~-~----~l~~~vp~~~~~~i~~~~~~~L---~~~gl~~~di~~~~~Hqgg~~Il~~v~~~L---- 317 (393)
T PLN03172 251 DGAIDGHLREV-GLT-F----HLLKDVPGLISKNIEKSLVEAF---APIGINDWNSIFWIAHPGGPAILDQVEIKL---- 317 (393)
T ss_pred cccccceEEcC-CcE-E----EEechHHHHHHHHHHHHHHHHh---hhcCCCccccceEEecCCcHHHHHHHHHHc----
Confidence 1111111 111 110 0 1122222222222222222222 455788899999999999999999999988
Q ss_pred hccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhh---
Q 012253 270 FLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHE--- 346 (467)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~--- 346 (467)
++++++. .+|+.+.+++|||+|+|++++|..++++
T Consensus 318 --------------------gl~~~~~----------------------~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~ 355 (393)
T PLN03172 318 --------------------DLKEEKL----------------------RATRHVLSDYGNMSSACVLFILDEMRKKSIE 355 (393)
T ss_pred --------------------CCCHHHH----------------------HHHHHHHHHhCccHHhHHHHHHHHHHhhhhh
Confidence 6776643 2333445899999999999999998742
Q ss_pred cCcCCCC---CEEEEEEeccccceeeEEEEEec
Q 012253 347 KHSSLEG---KRVIMFSYGSGLTATMFSLQLQE 376 (467)
Q Consensus 347 ~~~~~~G---~~ill~syGsG~~~~~~~~~~~~ 376 (467)
.+++++| ++++|++||+|+++++++++|.+
T Consensus 356 ~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~ 388 (393)
T PLN03172 356 EGKGSTGEGLEWGVLFGFGPGLTVETVVLHSVP 388 (393)
T ss_pred cCCCCCCCCcceEEEEEeCCcceeeeeeeEecc
Confidence 2455555 88999999999999999999964
No 28
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=3.8e-38 Score=323.76 Aligned_cols=308 Identities=16% Similarity=0.183 Sum_probs=219.3
Q ss_pred eeEEeEEEEecCCceeehhHHhhhhCC------Cc---Cee-----EEeccceEeeccCC--------------------
Q 012253 8 NVGILALDIYFPPTCVLQEALEVHDGV------SK---GKY-----TVGLGQDCMAFCSE-------------------- 53 (467)
Q Consensus 8 ~vgI~ai~~y~P~~~v~~~el~~~~g~------~~---~k~-----~~Gig~r~~av~~~-------------------- 53 (467)
.+.|.+|+...|+++++|+++.++... .+ .++ ..||..|++.++..
T Consensus 15 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r~ 94 (389)
T PLN03168 15 PACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVRH 94 (389)
T ss_pred CeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHHH
Confidence 377999999999999999998877421 11 123 37999999866321
Q ss_pred ---CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCe-eEEeeCCcChHHHHHHH
Q 012253 54 ---VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALF 129 (467)
Q Consensus 54 ---~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~-~~~di~~aC~gg~~AL~ 129 (467)
.+.+.+||++|+++||+++|++++|||+||++|+|+. ..|+++.+|+++||+ ++.+ +++|++.||+||++||.
T Consensus 95 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl--~~~~~r~~d~~~gC~g~~~aL~ 171 (389)
T PLN03168 95 DIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGV-NMPGADHALAKLLGL--KPTVKRVMMYQTGCFGGASVLR 171 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC-CCccHHHHHHHHhCc--CCcceeeeeeCCccHHHHHHHH
Confidence 0147899999999999999999999999999999995 489999999999998 4554 58999999999999999
Q ss_pred HHHHHHHhCCCCCCEEEEEEeecc--cccCC--C------CCCccccceeEEEecCCCCceeecccccccccCccccccc
Q 012253 130 NCVNWVESASWDGRYGLVVCTDSA--VYAEG--P------ARPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKP 199 (467)
Q Consensus 130 ~A~~~l~a~~~~~~~aLVV~sD~~--~y~~~--~------~~~t~GdGAvA~Ll~~~~~~~~~~~~~~~~~~~~~df~~p 199 (467)
+|.++++++ +.++||||++|++ .+.+. . ...+|||||+|+||++++.-..+.+....+... ....|
T Consensus 172 ~A~~~i~~~--~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~--~~~~p 247 (389)
T PLN03168 172 VAKDLAENN--KGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAG--ETILP 247 (389)
T ss_pred HHHHHHHhC--CCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeee--eEEEc
Confidence 999999999 5599999999998 33221 1 246799999999999864210000111111110 00111
Q ss_pred CC-C--------CCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhh
Q 012253 200 NL-A--------SEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDF 270 (467)
Q Consensus 200 ~~-~--------~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~ 270 (467)
.. + ..+..+..+.......+.+..+.+.+. ...+....|+++|++||++.++++.+.++|
T Consensus 248 ~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l------~~~~~~~~d~~~~v~Hqgg~~Il~~v~~~L----- 316 (389)
T PLN03168 248 ESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEAR------KCVGSPDWNEMFWAVHPGGPAILDQVEAKL----- 316 (389)
T ss_pred CCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHH------HhcCCCccccceEEecCCcHHHHHHHHHHc-----
Confidence 10 0 001111111111122223333333332 233455567899999999999999999988
Q ss_pred ccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcC
Q 012253 271 LRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSS 350 (467)
Q Consensus 271 ~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~ 350 (467)
|+++++.. .|+.+.+++|||+|||+++.|..++++ ++
T Consensus 317 -------------------gl~~ek~~----------------------~s~~vl~~yGNtSSaSv~~vL~~~~~~--~~ 353 (389)
T PLN03168 317 -------------------KLTKDKMQ----------------------GSRDILSEFGNMSSASVLFVLDQIRQR--SV 353 (389)
T ss_pred -------------------CCCHHHHH----------------------HHHHHHHHhCccHhhhHHHHHHHHHHH--Hh
Confidence 78877542 222334899999999999999998764 22
Q ss_pred CC--------CCEEEEEEeccccceeeEEEEEec
Q 012253 351 LE--------GKRVIMFSYGSGLTATMFSLQLQE 376 (467)
Q Consensus 351 ~~--------G~~ill~syGsG~~~~~~~~~~~~ 376 (467)
++ |++++|++||+|+++++++++|..
T Consensus 354 ~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~~ 387 (389)
T PLN03168 354 KMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAAA 387 (389)
T ss_pred hcCCCCCCCCccEEEEEEEcchhhhhhhhheecc
Confidence 23 289999999999999999999864
No 29
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=6.8e-38 Score=322.87 Aligned_cols=306 Identities=16% Similarity=0.223 Sum_probs=223.5
Q ss_pred eEEeEEEEecCCceeehhHHhhhhCC-----C-c--C-ee-----EEeccceEeeccCC----C----------------
Q 012253 9 VGILALDIYFPPTCVLQEALEVHDGV-----S-K--G-KY-----TVGLGQDCMAFCSE----V---------------- 54 (467)
Q Consensus 9 vgI~ai~~y~P~~~v~~~el~~~~g~-----~-~--~-k~-----~~Gig~r~~av~~~----~---------------- 54 (467)
..|.+|+..+|++.++|+++.++... + + . ++ ..||..|++.+.+. +
T Consensus 21 ~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 100 (401)
T PLN03170 21 ATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQD 100 (401)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHHH
Confidence 67999999999999999998877421 1 1 1 22 37999998765210 0
Q ss_pred ---CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCe-eEEeeCCcChHHHHHHHH
Q 012253 55 ---EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALFN 130 (467)
Q Consensus 55 ---Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~-~~~di~~aC~gg~~AL~~ 130 (467)
+.+.+||++|+++||+++|++++|||+||++|+|+.+ .|+++.+|+++||+ .+.+ +++|++.||+|+++||.+
T Consensus 101 ~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl--~~~~~r~~d~~~gC~G~~~aL~~ 177 (401)
T PLN03170 101 IVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKMLGL--RPSVNRLMMYQQGCFAGGTVLRV 177 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC-CChHHHHHHHHhCc--CcccHHHHhhcChhHHHHHHHHH
Confidence 1257799999999999999999999999999999976 99999999999998 4555 589999999999999999
Q ss_pred HHHHHHhCCCCCCEEEEEEeecc--cccCCC--------CCCccccceeEEEecCCCCceeec---ccccccccCccccc
Q 012253 131 CVNWVESASWDGRYGLVVCTDSA--VYAEGP--------ARPTGGAAAVAMLIGPDAPIAFES---KLRGSHMSHAYDFY 197 (467)
Q Consensus 131 A~~~l~a~~~~~~~aLVV~sD~~--~y~~~~--------~~~t~GdGAvA~Ll~~~~~~~~~~---~~~~~~~~~~~df~ 197 (467)
|.++++++ +.++||||++|++ .+.+.. ....|||||+|+||++++.-.+.. .+.... ...
T Consensus 178 A~~l~~~~--~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~-----~~~ 250 (401)
T PLN03170 178 AKDLAENN--RGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSAS-----QTI 250 (401)
T ss_pred HHHHHHcC--CCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeecc-----ceE
Confidence 99999999 5599999999997 332211 136799999999999865311100 011110 011
Q ss_pred ccCCCC--CC-ceecC------cchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhh
Q 012253 198 KPNLAS--EY-PVVDG------KLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268 (467)
Q Consensus 198 ~p~~~~--~~-~~vdG------~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~ 268 (467)
.|.... .+ ...+| +.......+.+..+.+.++ .++++..+|+++|++||++.++++.+.++|
T Consensus 251 ~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L------~~~gl~~~di~~~v~Hqgg~~il~~v~~~L--- 321 (401)
T PLN03170 251 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAF------KPLGITDYNSIFWVAHPGGPAILDQVEAKV--- 321 (401)
T ss_pred ecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHH------HhcCCCccccCeEEecCCcHHHHHHHHHHc---
Confidence 121000 00 01122 2222222333333333333 445788899999999999999999999888
Q ss_pred hhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHh---
Q 012253 269 DFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLH--- 345 (467)
Q Consensus 269 ~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~--- 345 (467)
|+++++. .+|+.+.+++|||+|+|++++|..+++
T Consensus 322 ---------------------gl~~~~~----------------------~~s~~~l~~~GNtsSasv~~vL~~~~~~~~ 358 (401)
T PLN03170 322 ---------------------GLEKERM----------------------RATRHVLSEYGNMSSACVLFILDEMRKRSA 358 (401)
T ss_pred ---------------------CCChHHH----------------------HHHHHHHHHhCccHHhHHHHHHHHHHHhHh
Confidence 7777643 223344589999999999999999984
Q ss_pred hcCcCCCC---CEEEEEEeccccceeeEEEEEec
Q 012253 346 EKHSSLEG---KRVIMFSYGSGLTATMFSLQLQE 376 (467)
Q Consensus 346 ~~~~~~~G---~~ill~syGsG~~~~~~~~~~~~ 376 (467)
+.+++++| ++++|++||+|+++++.+++|.+
T Consensus 359 ~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~ 392 (401)
T PLN03170 359 EDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVP 392 (401)
T ss_pred hcCCCCCCCCccEEEEEEeCchHhHHhHHheecc
Confidence 22566677 89999999999999999999966
No 30
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=2.5e-37 Score=317.44 Aligned_cols=309 Identities=17% Similarity=0.214 Sum_probs=221.2
Q ss_pred eeEEeEEEEecCCceeehhHHhhhhC------CCcC---ee-----EEeccceEeeccCC----C---------------
Q 012253 8 NVGILALDIYFPPTCVLQEALEVHDG------VSKG---KY-----TVGLGQDCMAFCSE----V--------------- 54 (467)
Q Consensus 8 ~vgI~ai~~y~P~~~v~~~el~~~~g------~~~~---k~-----~~Gig~r~~av~~~----~--------------- 54 (467)
.+.|.+++...|++.++|+++.++.. ..+. ++ ..||..|++.+++. .
T Consensus 16 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 95 (391)
T PLN03173 16 PATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQ 95 (391)
T ss_pred CeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHHH
Confidence 37799999999999999999887741 1121 12 37999998766311 0
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCe-eEEeeCCcChHHHHHHH
Q 012253 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALF 129 (467)
Q Consensus 55 ----Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~-~~~di~~aC~gg~~AL~ 129 (467)
+.+.+||++|+++||+++|++++|||+||++|+|+.+ .|+++.+|+++||+ .+.+ +.++++.||+|++.||.
T Consensus 96 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~-~P~~a~~l~~~LGl--~~~~~~~~~~~~gC~g~~~aL~ 172 (391)
T PLN03173 96 DMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGL--RSSVKRFMMYQQGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-ccHHHHHHHHHhCC--CccceeeehhcCccHHHHHHHH
Confidence 1257999999999999999999999999999999976 79999999999998 5556 46788999999999999
Q ss_pred HHHHHHHhCCCCCCEEEEEEeeccc--ccCCCC--------CCccccceeEEEecCCCCceeec---cccccc------c
Q 012253 130 NCVNWVESASWDGRYGLVVCTDSAV--YAEGPA--------RPTGGAAAVAMLIGPDAPIAFES---KLRGSH------M 190 (467)
Q Consensus 130 ~A~~~l~a~~~~~~~aLVV~sD~~~--y~~~~~--------~~t~GdGAvA~Ll~~~~~~~~~~---~~~~~~------~ 190 (467)
+|.++++++ ++++||||++|++. +.+..+ ...|||||+|+||++++...++. .+.++. +
T Consensus 173 ~A~~~~~~~--~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t 250 (391)
T PLN03173 173 LAKDLAENN--KGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDS 250 (391)
T ss_pred HHHHHHHhC--CCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCC
Confidence 999999999 56999999999973 433221 36789999999999754211110 011111 1
Q ss_pred cCccccc-ccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhh
Q 012253 191 SHAYDFY-KPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND 269 (467)
Q Consensus 191 ~~~~df~-~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~ 269 (467)
.+.+.+. ++. +.. ..+. +.....-.+.+..+.+.++ .+++++.+|+|+|++||++.++++.+.++|
T Consensus 251 ~~~~~~~i~~~-G~~-~~l~-~~vp~~~~~~~~~~i~~~L------~~~gl~~~di~~~v~Hqgg~~Il~~v~~~L---- 317 (391)
T PLN03173 251 DGAIDGHLREV-GLT-FHLL-KDVPGLISKNVEKSLTEAF------KPLGISDWNSLFWIAHPGGPAILDQVEAKL---- 317 (391)
T ss_pred ccceeeEEEcC-ceE-EEEe-cHHHHHHHHHHHHHHHHHH------HhcCCCccccCeEEECCCcHHHHHHHHHHc----
Confidence 1111111 111 100 0111 2221112222333333333 445788999999999999999999999888
Q ss_pred hccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhh---
Q 012253 270 FLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHE--- 346 (467)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~--- 346 (467)
|+++++. .+|+.+.+++|||+|+|++++|..++++
T Consensus 318 --------------------gL~~ekl----------------------~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~ 355 (391)
T PLN03173 318 --------------------ALKPEKL----------------------RATRHVLSEYGNMSSACVLFILDEMRKKSAE 355 (391)
T ss_pred --------------------CCChHHH----------------------HHHHHHHHHhCcchhhHHHHHHHHHHHhhhh
Confidence 7877753 2233344899999999999999999963
Q ss_pred cCcCC--CC-CEEEEEEeccccceeeEEEEEec
Q 012253 347 KHSSL--EG-KRVIMFSYGSGLTATMFSLQLQE 376 (467)
Q Consensus 347 ~~~~~--~G-~~ill~syGsG~~~~~~~~~~~~ 376 (467)
.+... +| ++++|++||+|+++++++++|..
T Consensus 356 ~~~~~~g~~~~~~l~~afGpG~t~e~~ll~~~~ 388 (391)
T PLN03173 356 DGLKSTGEGLEWGVLFGFGPGLTVETVVLHSVA 388 (391)
T ss_pred cCCCCCCCCcceEEEEEeCchHHHHHHHHhhcc
Confidence 12222 23 88999999999999999998854
No 31
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.3e-36 Score=312.06 Aligned_cols=303 Identities=16% Similarity=0.129 Sum_probs=219.8
Q ss_pred eeEEeEEEEecCCceeehhHHhhhhCC------------------------CcCee--EEeccceEeeccC---------
Q 012253 8 NVGILALDIYFPPTCVLQEALEVHDGV------------------------SKGKY--TVGLGQDCMAFCS--------- 52 (467)
Q Consensus 8 ~vgI~ai~~y~P~~~v~~~el~~~~g~------------------------~~~k~--~~Gig~r~~av~~--------- 52 (467)
+|+|.+++.|+|++.|+|+|+++..+. +.+++ .+||..|+++...
T Consensus 2 ~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 81 (372)
T PRK07515 2 NVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDRMR 81 (372)
T ss_pred CcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccccC
Confidence 689999999999999999999876321 23344 3799888875321
Q ss_pred -------CC--CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChH
Q 012253 53 -------EV--EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYG 123 (467)
Q Consensus 53 -------~~--Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~g 123 (467)
.. ....+|++.|+++||+++|+++++||.||++|.++.+..|+.+..|++.||+ + +.+++++.+|+|
T Consensus 82 ~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl---~-~~~~~v~~aCas 157 (372)
T PRK07515 82 PRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGI---E-GFAFDMNVACSS 157 (372)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCC---C-CcEEEecchhHH
Confidence 01 1346899999999999999999999999999998888899999999999997 2 568999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCEEEEEEeecc-cccCC---CCCCccccceeEEEecCCCCce--eeccccccccc-Cccc-
Q 012253 124 GTAALFNCVNWVESASWDGRYGLVVCTDSA-VYAEG---PARPTGGAAAVAMLIGPDAPIA--FESKLRGSHMS-HAYD- 195 (467)
Q Consensus 124 g~~AL~~A~~~l~a~~~~~~~aLVV~sD~~-~y~~~---~~~~t~GdGAvA~Ll~~~~~~~--~~~~~~~~~~~-~~~d- 195 (467)
++.||..|.++|++|.. ++||||++|.+ .+.+. ....+|||||+|+||++.+.-. -.....++... +..+
T Consensus 158 g~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~d~~~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~ 235 (372)
T PRK07515 158 ATFGIQTAANAIRSGSA--RRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNN 235 (372)
T ss_pred HHHHHHHHHHHHHcCCC--CEEEEEeeecccccccccCCCCCEEecCccEEEEEeeccccccCCCceEEEEEeecccccc
Confidence 99999999999999955 99999999997 33322 2346789999999999864210 00001111100 0001
Q ss_pred ------cc---ccC---CCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHH
Q 012253 196 ------FY---KPN---LASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFA 263 (467)
Q Consensus 196 ------f~---~p~---~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~ 263 (467)
+. .+. ....+..++|....+.+.+.+..+++..+ ++++++++|||+|++||++.+|.+.+.+
T Consensus 236 ~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L------~~~gl~~~dId~~~~Hq~~~~~~d~~~~ 309 (372)
T PRK07515 236 IRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHL------AENGLTPADVKRFWLHQANINMNQLIGK 309 (372)
T ss_pred eecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHH------HHcCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 11 110 00112244666554434444444444333 4557999999999999999999999887
Q ss_pred hhhhhhhccccCchhhHHhhhcCCCCCC--CcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHH
Q 012253 264 RLFFNDFLRNASSVDEIAKEKLAPYSTL--SDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFA 341 (467)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~~~l~~~~g~--~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~ 341 (467)
+++ |+ +.++. ..+.+++|||+|||+|++|.
T Consensus 310 ~ll-----------------------g~~~~~~~~-------------------------~~~~~~~GNt~sasi~~~L~ 341 (372)
T PRK07515 310 KVL-----------------------GRDATPEEA-------------------------PVILDEYANTSSAGSIIAFH 341 (372)
T ss_pred Hhc-----------------------cCCCChhhc-------------------------eEeHHhcCCchhhHHHHHHH
Confidence 752 32 22221 12238999999999999999
Q ss_pred HHHhhcCcCCCCCEEEEEEeccccceeeEEEE
Q 012253 342 SLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQ 373 (467)
Q Consensus 342 ~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~ 373 (467)
.+++ ++++||+|+|++||+|+++++.+++
T Consensus 342 ~~~~---~~~~Gd~vll~~~G~G~~~~~~ll~ 370 (372)
T PRK07515 342 KHSD---DLAAGDLGVICSFGAGYSIGSVIVR 370 (372)
T ss_pred HHhc---cCCCCCEEEEEEecccHHHHHHHhc
Confidence 9853 4689999999999999999987765
No 32
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.1e-36 Score=312.87 Aligned_cols=317 Identities=17% Similarity=0.267 Sum_probs=224.0
Q ss_pred CCCceeEEeEEEEecCCc--eeehhHHhhhh---C-CCcCee--------EEeccceEeeccC------C-------CCC
Q 012253 4 WHPKNVGILALDIYFPPT--CVLQEALEVHD---G-VSKGKY--------TVGLGQDCMAFCS------E-------VED 56 (467)
Q Consensus 4 ~~~~~vgI~ai~~y~P~~--~v~~~el~~~~---g-~~~~k~--------~~Gig~r~~av~~------~-------~Ed 56 (467)
.||..|.+...++|.|+. +++.+.+.++. | .+++-+ +.|||++ ..+|+ + .|.
T Consensus 93 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~-t~~p~~~~~~~~~~~~~~~~~e 171 (502)
T PLN02377 93 TRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGED-TYVPEAMHYIPPRPSMAAAREE 171 (502)
T ss_pred cCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCc-cccCchhccCCccchHHHHHHH
Confidence 467889999999999975 68888777663 2 233221 4799884 33441 1 245
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC-CcChHHHHHHHHHHHHH
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWV 135 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~-~aC~gg~~AL~~A~~~l 135 (467)
+.+++..|+++||+++|++|+|||.||+ |+|++...|++++.|+++||+ .+++.+||++ .||+||+.||++|.+++
T Consensus 172 a~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGl--r~~v~afdL~gmGCsggl~aL~lA~~ll 248 (502)
T PLN02377 172 AEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKL--RGNIRSFNLGGMGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCC--CCCCeEEecccchhhHHHHHHHHHHHHH
Confidence 8999999999999999999999999988 899998899999999999998 6699999999 59999999999999999
Q ss_pred HhCCCCCCEEEEEEeecc-c-c--cCCCC----CCccccceeEEEecCCCCce----eec-cccccccc---Ccccc-cc
Q 012253 136 ESASWDGRYGLVVCTDSA-V-Y--AEGPA----RPTGGAAAVAMLIGPDAPIA----FES-KLRGSHMS---HAYDF-YK 198 (467)
Q Consensus 136 ~a~~~~~~~aLVV~sD~~-~-y--~~~~~----~~t~GdGAvA~Ll~~~~~~~----~~~-~~~~~~~~---~~~df-~~ 198 (467)
+++ ++++||||++|.. . + .+... ...|||||+|+||++.+.-. +.. +...++.. +.++. +.
T Consensus 249 ~~~--~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~ 326 (502)
T PLN02377 249 QVH--RNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQ 326 (502)
T ss_pred HcC--CCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeee
Confidence 999 5599999999997 2 2 22212 26789999999999743100 000 11112211 11221 11
Q ss_pred c---CCCC------CCceecCc-----------chH----HHHHHHHHHHHHHHHHHHHhhhcCC-CCccccceeccCCc
Q 012253 199 P---NLAS------EYPVVDGK-----------LSQ----TCYLMALDSCYKYFCQKFEKLEGRQ-FSMLDVDYFVFHSP 253 (467)
Q Consensus 199 p---~~~~------~~~~vdG~-----------~s~----~~y~~a~~~~~~~~~~~~~~~~~~~-~~~~d~d~~i~H~p 253 (467)
| .++. +.+.+.|+ ... +.+..+.....+.+.+.+ +..+ ...+|||+||+||+
T Consensus 327 ~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l---~~~~p~~~~didhf~iHqg 403 (502)
T PLN02377 327 EQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKM---KPYIPDFKLAFDHFCIHAG 403 (502)
T ss_pred ccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHH---hhccCCcHhhcCEEEECCC
Confidence 2 1111 12223322 110 111111111111122121 1111 34689999999999
Q ss_pred hHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCcccc
Q 012253 254 YNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYT 333 (467)
Q Consensus 254 ~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~t 333 (467)
+.++++.+.++| |+++++ +++...+ .+++|||+|
T Consensus 404 gr~IId~v~k~L------------------------gL~~~~------~e~sr~t----------------L~r~GNTSS 437 (502)
T PLN02377 404 GRAVIDELEKNL------------------------QLLPVH------VEASRMT----------------LHRFGNTSS 437 (502)
T ss_pred CHHHHHHHHHHc------------------------CCCccc------chHHHHH----------------HHhcCCchh
Confidence 999999999888 666532 1223333 389999999
Q ss_pred chHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEec
Q 012253 334 ASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQE 376 (467)
Q Consensus 334 aS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~~ 376 (467)
+|+|+.|+.++++ +++++|++|++++||+|+++++.++++..
T Consensus 438 aSI~~aL~~~~~~-grik~Gd~VlliaFGsGf~~~s~v~~~~~ 479 (502)
T PLN02377 438 SSIWYELAYIEAK-GRMRKGNRVWQIAFGSGFKCNSAVWEALR 479 (502)
T ss_pred hHHHHHHHHHHHc-CCCCCCCeEEEEEEccccEeeeEEEEEec
Confidence 9999999999887 88999999999999999999999999876
No 33
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.8e-35 Score=306.27 Aligned_cols=315 Identities=18% Similarity=0.259 Sum_probs=221.9
Q ss_pred CCCceeEEeEEEEecCCc--eeehhHHhhhh---C-CCcCee--------EEeccceEeeccC------C-------CCC
Q 012253 4 WHPKNVGILALDIYFPPT--CVLQEALEVHD---G-VSKGKY--------TVGLGQDCMAFCS------E-------VED 56 (467)
Q Consensus 4 ~~~~~vgI~ai~~y~P~~--~v~~~el~~~~---g-~~~~k~--------~~Gig~r~~av~~------~-------~Ed 56 (467)
.||..|.+...++|-|+. +++.+.+.+.. | .+++.+ +.|+|++.+ +|+ + .+.
T Consensus 109 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty-~P~~~~~~~~~~~~~~~r~e 187 (521)
T PLN02854 109 KRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETY-LPRGITSRPPNLCMEEARAE 187 (521)
T ss_pred cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccc-cCccccCCCCcchHHHHHHH
Confidence 467889999999999975 68888776663 2 233321 479998754 322 1 133
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC-CcChHHHHHHHHHHHHH
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWV 135 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~-~aC~gg~~AL~~A~~~l 135 (467)
+....-.|+.+||+++|++|+|||.||+ ++|+++..|+++++|+++||+ .+++.+||++ .||+||+.||.+|.+++
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID~LIv-~cS~~~p~PSlAa~I~n~LGl--r~~i~afdLsgmGCSggl~aL~lA~~lL 264 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIGILIV-NCSLFNPTPSLSAMIVNHYKL--RTDIKSYNLGGMGCSAGLISIDLANDLL 264 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCCHHHHHHHHhCC--CCCceEEecccchhhhHHHHHHHHHHHH
Confidence 5566667899999999999999999998 488888899999999999998 5699999998 79999999999999999
Q ss_pred HhCCCCCCEEEEEEeeccc--ccCCCC------CCccccceeEEEecCCCCc------eeeccccccccc---Cccc-cc
Q 012253 136 ESASWDGRYGLVVCTDSAV--YAEGPA------RPTGGAAAVAMLIGPDAPI------AFESKLRGSHMS---HAYD-FY 197 (467)
Q Consensus 136 ~a~~~~~~~aLVV~sD~~~--y~~~~~------~~t~GdGAvA~Ll~~~~~~------~~~~~~~~~~~~---~~~d-f~ 197 (467)
+++ ++++||||++|... +..+++ ...|||||+|+||++.+.- .+. +...++.. +.++ .+
T Consensus 265 ~~~--~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~-~~v~t~~~ad~~~~~~i~ 341 (521)
T PLN02854 265 KAN--PNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLV-HTVRTHKGADDKNYNCVY 341 (521)
T ss_pred HhC--CCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchhee-eEEEEEEeeCCCccCeEE
Confidence 999 55999999999983 311122 3568999999999975410 110 01112211 1111 12
Q ss_pred ccC--CCC-------CC-----------ceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCc------cccceeccC
Q 012253 198 KPN--LAS-------EY-----------PVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSM------LDVDYFVFH 251 (467)
Q Consensus 198 ~p~--~~~-------~~-----------~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~------~d~d~~i~H 251 (467)
.|. .|. +. ..+.|+..+. +.+.+.-......+++ .++++.. +||||||+|
T Consensus 342 ~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~-~se~~~f~~~~i~~~L---~~~gl~~~~pd~~~didhf~iH 417 (521)
T PLN02854 342 QREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLP-LSEQFMFFVTLVRRKL---LKAKVKPYIPDFKLAFEHFCIH 417 (521)
T ss_pred eccCCCCcccccccccccchhhhhhhhhhhhccccccc-hHHHHHHHHHHHHHHH---HHcCCCccCCcccccCcEEEEC
Confidence 221 010 11 1123333211 1111110112222222 3345554 689999999
Q ss_pred CchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCcc
Q 012253 252 SPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNM 331 (467)
Q Consensus 252 ~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~ 331 (467)
|++.++++.+.++| |+++++ .+++.....++|||
T Consensus 418 qggr~IId~v~k~L------------------------gL~~~~----------------------~e~sr~tL~rfGNT 451 (521)
T PLN02854 418 AGGRAVLDELQKNL------------------------QLSDWH----------------------MEPSRMTLHRFGNT 451 (521)
T ss_pred CCCHHHHHHHHHHc------------------------CCCccc----------------------ccchHHHhhhcCCh
Confidence 99999999999988 665432 12233334899999
Q ss_pred ccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEec
Q 012253 332 YTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQE 376 (467)
Q Consensus 332 ~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~~ 376 (467)
+|+|+|+.|+.+.++ +++++||+|++++||+|++|++.+++|..
T Consensus 452 SSASI~~~L~~~~~k-Grik~GD~Vl~iaFGsGft~~sav~~~~~ 495 (521)
T PLN02854 452 SSSSLWYELAYTEAK-GRVSAGDRVWQIAFGSGFKCNSAVWKALR 495 (521)
T ss_pred HhhHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhhhheeeEEec
Confidence 999999999999887 88999999999999999999999999876
No 34
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=8.6e-35 Score=302.05 Aligned_cols=315 Identities=20% Similarity=0.286 Sum_probs=221.4
Q ss_pred CCCceeEEeEEEEecCCc--eeehhHHhhhh------C-CCcCe---e--------EEeccceEeeccCCC---------
Q 012253 4 WHPKNVGILALDIYFPPT--CVLQEALEVHD------G-VSKGK---Y--------TVGLGQDCMAFCSEV--------- 54 (467)
Q Consensus 4 ~~~~~vgI~ai~~y~P~~--~v~~~el~~~~------g-~~~~k---~--------~~Gig~r~~av~~~~--------- 54 (467)
.||..|.+...++|.|+. +++.+.+.++. | .+.+- + ++|||+|+. ++...
T Consensus 63 ~~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~-~p~~~~~~~~~~~~ 141 (478)
T PLN02932 63 TRPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETY-IPEGLQCLPLQQNL 141 (478)
T ss_pred cCCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCcee-eccccccCCHHHHH
Confidence 468889999999999975 68888777653 2 22222 1 479999975 33221
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC-CcChHHHHHHH
Q 012253 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALF 129 (467)
Q Consensus 55 ----Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~-~aC~gg~~AL~ 129 (467)
+.+.+|+.+|+++||+++|++|+|||.||++|+|+. ..|++++.|+++||+ ++++.+||++ .||+||+.||.
T Consensus 142 ~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGl--r~~i~~fdL~gmGCSggl~aL~ 218 (478)
T PLN02932 142 AVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKL--RDNIKSLNLGGMGCSAGVIAID 218 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCC--CCCceEEEeccchhhhHHHHHH
Confidence 248899999999999999999999999999999986 799999999999998 6799999999 79999999999
Q ss_pred HHHHHHHhCCCCCCEEEEEEeecc-ccc-CCC------CCCccccceeEEEecCCCC------ceeecccccccccC---
Q 012253 130 NCVNWVESASWDGRYGLVVCTDSA-VYA-EGP------ARPTGGAAAVAMLIGPDAP------IAFESKLRGSHMSH--- 192 (467)
Q Consensus 130 ~A~~~l~a~~~~~~~aLVV~sD~~-~y~-~~~------~~~t~GdGAvA~Ll~~~~~------~~~~~~~~~~~~~~--- 192 (467)
+|.++++++ ++++||||++|.. ..- .++ ....|||||+|+||++.+. ..+.. ...++...
T Consensus 219 lA~~ll~~~--~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~-~v~t~~~ad~~ 295 (478)
T PLN02932 219 AAKSLLQVH--RNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVH-TVRVHTGADDR 295 (478)
T ss_pred HHHHHHHcC--CCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEe-eeeeeeccCCC
Confidence 999999999 5599999999997 221 112 2467899999999998641 11211 11222111
Q ss_pred ccc-ccccC--CC------C-CCcee-----------cCcchH---HHHHHHHHHHHHHHHHHHHhhhcCCCC---cccc
Q 012253 193 AYD-FYKPN--LA------S-EYPVV-----------DGKLSQ---TCYLMALDSCYKYFCQKFEKLEGRQFS---MLDV 245 (467)
Q Consensus 193 ~~d-f~~p~--~~------~-~~~~v-----------dG~~s~---~~y~~a~~~~~~~~~~~~~~~~~~~~~---~~d~ 245 (467)
.++ .+.+. .| + +.|.+ +|.... +.+..++....+.+.+.. ..+.. .++|
T Consensus 296 ~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~----~~~~~~~~~~~i 371 (478)
T PLN02932 296 SYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPK----LKHYIPDFKLAF 371 (478)
T ss_pred ccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHH----hhcCcHhHHhhh
Confidence 111 11221 00 0 11111 111110 111111211111111110 01122 2689
Q ss_pred ceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccc
Q 012253 246 DYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIP 325 (467)
Q Consensus 246 d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~ 325 (467)
|+||+||++.++++.+.++| |+++++ +|+..+++
T Consensus 372 d~f~iHqggr~IIdav~k~L------------------------gL~~~~------~e~s~~tL---------------- 405 (478)
T PLN02932 372 EHFCIHAGGRALIDEMEKNL------------------------HLTPLD------VEASRMTL---------------- 405 (478)
T ss_pred ceEEEccCCHHHHHHHHHHc------------------------CCChHH------HHHHHHHH----------------
Confidence 99999999999999999988 676642 23333344
Q ss_pred cccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEec
Q 012253 326 KQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQE 376 (467)
Q Consensus 326 ~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~~ 376 (467)
+++|||+|+|+|+.|+.+..+ +++++||+|++++||+|++++..+++.-.
T Consensus 406 ~rfGNTSSaSI~~~L~~~ea~-grik~Gd~vl~iaFGsGf~~~s~vw~~~~ 455 (478)
T PLN02932 406 HRFGNTSSSSIWYELAYTEAK-GRMKKGDRIWQIALGSGFKCNSSVWVALR 455 (478)
T ss_pred HHhCChhhhHHHHHHHHHHHc-CCCCCCCEEEEEEEeccHHHHHHHHHHhc
Confidence 899999999999999999877 78899999999999999999988866543
No 35
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.9e-34 Score=298.09 Aligned_cols=303 Identities=17% Similarity=0.253 Sum_probs=217.1
Q ss_pred CCCceeEEeEEEEecCCc--eeehhHHhhhh---C-CCcCee--------EEeccceEeeccC------C-------CCC
Q 012253 4 WHPKNVGILALDIYFPPT--CVLQEALEVHD---G-VSKGKY--------TVGLGQDCMAFCS------E-------VED 56 (467)
Q Consensus 4 ~~~~~vgI~ai~~y~P~~--~v~~~el~~~~---g-~~~~k~--------~~Gig~r~~av~~------~-------~Ed 56 (467)
.||..|.+...++|.|+. +++.+.+.+.. | .+++-+ +.|+|++.+ +|+ + .+.
T Consensus 97 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~-~p~~~~~~~~~~~~~~~~~E 175 (511)
T PLN02192 97 TRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTY-LPEAVLNVPPNPCMAEARKE 175 (511)
T ss_pred cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccc-CChhhccCCCCccHHHHHHH
Confidence 467889999999999976 68888777663 2 233321 479998754 321 1 234
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC-CcChHHHHHHHHHHHHH
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWV 135 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~-~aC~gg~~AL~~A~~~l 135 (467)
+..+...|+++||+++|++|+|||.||++ +|++...|++++.|+++||+ .+++.+||++ .||+||+.||++|.+++
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~-~S~~~~~PSlaa~I~n~lGl--r~~i~afdLsgmGCSggl~aLdlA~~lL 252 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL--RGNILSYNLGGMGCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCchHHHHHHHHhCC--CCCceEEEcccchhhhHHHHHHHHHHHH
Confidence 78889999999999999999999999987 56778899999999999998 5689999999 59999999999999999
Q ss_pred HhCCCCCCEEEEEEeeccc--ccCCCCC------CccccceeEEEecCCCC------ceeecccccccccCcccc----c
Q 012253 136 ESASWDGRYGLVVCTDSAV--YAEGPAR------PTGGAAAVAMLIGPDAP------IAFESKLRGSHMSHAYDF----Y 197 (467)
Q Consensus 136 ~a~~~~~~~aLVV~sD~~~--y~~~~~~------~t~GdGAvA~Ll~~~~~------~~~~~~~~~~~~~~~~df----~ 197 (467)
+++ ++++||||++|... +..++++ ..|||||+|+||++.+. ..+.. ...++.....+. +
T Consensus 253 ~a~--~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~-~vrt~~~~dd~~~~~v~ 329 (511)
T PLN02192 253 QVH--PNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVH-TVRTHKGADDKCFACVT 329 (511)
T ss_pred HcC--CCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeee-eEEEEecCChhhcccee
Confidence 999 55999999999984 2112222 56899999999998431 11110 011221111111 1
Q ss_pred ccCCC---------CCCc-----------------------------eecCcchHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 012253 198 KPNLA---------SEYP-----------------------------VVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQ 239 (467)
Q Consensus 198 ~p~~~---------~~~~-----------------------------~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~ 239 (467)
.|... .+.+ .++|+.. |..+++. +...
T Consensus 330 ~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~v---fk~~~~~----~~p~-------- 394 (511)
T PLN02192 330 QEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKL---FKMKLKP----YIPD-------- 394 (511)
T ss_pred cccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHH---HHHHhhh----ccHH--------
Confidence 11000 0000 0111111 1111111 1110
Q ss_pred CCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcC
Q 012253 240 FSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQ 319 (467)
Q Consensus 240 ~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~ 319 (467)
...+||+||+||++.++++.+.++| |+++++ +|+...++
T Consensus 395 -~~~~Idhf~iHqggr~IId~v~k~L------------------------gL~~~~------~e~sr~tL---------- 433 (511)
T PLN02192 395 -FKLAFEHFCIHAGGRAVLDELEKNL------------------------QLSDWH------MEPSRMTL---------- 433 (511)
T ss_pred -HHHhhceEeeccCCHHHHHHHHHHc------------------------CCCchh------hhHHHHHH----------
Confidence 1247999999999999999999988 565531 22333333
Q ss_pred CCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEec
Q 012253 320 PSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQE 376 (467)
Q Consensus 320 ~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~~ 376 (467)
.++|||+|+|+|+.|+.+.++ +++++||+|++++||+|+++++.+++|..
T Consensus 434 ------~rfGNTSSaSI~~aL~~~eak-grik~GDrVl~iaFGsGf~~~sav~~~~~ 483 (511)
T PLN02192 434 ------YRFGNTSSSSLWYELAYSEAK-GRIKKGDRTWQIAFGSGFKCNSAVWKALR 483 (511)
T ss_pred ------hHcCChHHhHHHHHHHHHHHc-CCCCCCCEEEEEEEcchHhhhhhheeeec
Confidence 899999999999999999887 88999999999999999999999999876
No 36
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.6e-33 Score=263.74 Aligned_cols=306 Identities=17% Similarity=0.219 Sum_probs=227.1
Q ss_pred EEeEEEEecCCceeehhHHhhhh----CCCc-Ce----eE--EeccceEeeccCC---------------CCCHHHHHHH
Q 012253 10 GILALDIYFPPTCVLQEALEVHD----GVSK-GK----YT--VGLGQDCMAFCSE---------------VEDVISMSLT 63 (467)
Q Consensus 10 gI~ai~~y~P~~~v~~~el~~~~----g~~~-~k----~~--~Gig~r~~av~~~---------------~Ed~~~ma~~ 63 (467)
-|.+++.++|++.++|.|+...+ ..+. +. |. .+|..|+...|.+ -|.++.++++
T Consensus 3 ~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v~ 82 (356)
T COG3424 3 VIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGVD 82 (356)
T ss_pred eeeecccCCCccccchHHHHHHHHHhccccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHHHHHHH
Confidence 58999999999999997766543 1111 11 11 2445454433221 1568999999
Q ss_pred HHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCC-cChHHHHHHHHHHHHHHhCCCCC
Q 012253 64 VVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNCVNWVESASWDG 142 (467)
Q Consensus 64 Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~-aC~gg~~AL~~A~~~l~a~~~~~ 142 (467)
|+++||+..++.|+|||+|+++|+|+.- .|++.++|+++||+ ++++..+.+.. ||++|.+||..|.+|++++ |.
T Consensus 83 a~r~aL~~~~l~pedId~vv~vtsTG~~-~Ps~dari~~~Lgl--~p~~~Rvpv~glGCaaga~glara~~y~ra~--P~ 157 (356)
T COG3424 83 ALRRALDGSPLRPEDIDAVVTVTSTGLA-TPSLDARIVGELGL--SPDTRRVPVWGLGCAAGAAGLARARDYCRAA--PD 157 (356)
T ss_pred HHHHHhccCCCCHHHCcEEEEEeecccc-CCChhHHHHhhcCC--CCccceeeeecchhhhhhhHHHHHHHHHhhC--cc
Confidence 9999999999999999999999999984 89999999999999 79999999975 9999999999999999999 67
Q ss_pred CEEEEEEeecc--cccCC--C-----CCCccccceeEEEecCCCCc----eeecccccccccCccc------ccccCCCC
Q 012253 143 RYGLVVCTDSA--VYAEG--P-----ARPTGGAAAVAMLIGPDAPI----AFESKLRGSHMSHAYD------FYKPNLAS 203 (467)
Q Consensus 143 ~~aLVV~sD~~--~y~~~--~-----~~~t~GdGAvA~Ll~~~~~~----~~~~~~~~~~~~~~~d------f~~p~~~~ 203 (467)
.+|||||.|.| .|... + +...||||++|+|++.+.+. ...+.+.++.+.-..| |-.. ..
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~--d~ 235 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVG--DQ 235 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCccccccceeec--CC
Confidence 99999999999 33322 1 13578999999999987541 1122233333332111 1111 11
Q ss_pred CCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhh
Q 012253 204 EYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKE 283 (467)
Q Consensus 204 ~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~ 283 (467)
.+..+-.+.....-...+......++. .++++.+||+.|+.|...+|++++..+.|
T Consensus 236 G~~~vlSrdlp~lIe~~l~~~V~~fL~------~~~ls~~dI~~w~~HPGG~KVida~~~sL------------------ 291 (356)
T COG3424 236 GLKVVLSRDLPNLIESYLAPNVTTFLA------THGLSIEDIEAWVVHPGGPKVIDAYEESL------------------ 291 (356)
T ss_pred cEEEEEcCchhHHHHHHhhhhHHHHHH------HcCCchhhhceeeeCCCCchHHHHHHHhc------------------
Confidence 122232222212122234444455544 34799999999999999999999998888
Q ss_pred hcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecc
Q 012253 284 KLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGS 363 (467)
Q Consensus 284 ~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGs 363 (467)
|++++.. +.|+...+++|||+|||++..|...+++. .++|.+.+|+++|.
T Consensus 292 ------gls~e~l----------------------~~s~~~L~~~GNMSSatvLfVL~d~l~~~--~~~g~~Gl~~A~GP 341 (356)
T COG3424 292 ------GLSPEAL----------------------ELSWDVLREYGNMSSATVLFVLEDTLQKA--PKSGSRGLMFAMGP 341 (356)
T ss_pred ------CCCHHHH----------------------HHHHHHHHHhCCccchhhHHHHHHHHHhc--CCCCcceeeeecCC
Confidence 7777632 34556679999999999999999999983 57999999999999
Q ss_pred ccceeeEEEEEec
Q 012253 364 GLTATMFSLQLQE 376 (467)
Q Consensus 364 G~~~~~~~~~~~~ 376 (467)
|++++..+++|..
T Consensus 342 Gf~sElvL~~w~~ 354 (356)
T COG3424 342 GFCSELVLLDWEG 354 (356)
T ss_pred cceeeeeeEEeec
Confidence 9999999999975
No 37
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.1e-32 Score=279.79 Aligned_cols=320 Identities=18% Similarity=0.253 Sum_probs=216.9
Q ss_pred CCCceeEEeEEEEecCCc--eeehhHHhhhh---C-CCcCee--------EEeccceEee---------ccC--CCCCHH
Q 012253 4 WHPKNVGILALDIYFPPT--CVLQEALEVHD---G-VSKGKY--------TVGLGQDCMA---------FCS--EVEDVI 58 (467)
Q Consensus 4 ~~~~~vgI~ai~~y~P~~--~v~~~el~~~~---g-~~~~k~--------~~Gig~r~~a---------v~~--~~Ed~~ 58 (467)
.||..|.+...++|-|+. +++.+.+.+.. | .+++-+ +.|||++.+. .+. +.....
T Consensus 55 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~~~~e~ 134 (466)
T PLN00415 55 TRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHES 134 (466)
T ss_pred cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhhhHHHH
Confidence 467889999999999865 67777766552 2 222211 2466654321 111 234467
Q ss_pred HHHHH-HHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCC-cChHHHHHHHHHHHHHH
Q 012253 59 SMSLT-VVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNCVNWVE 136 (467)
Q Consensus 59 ~ma~~-Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~-aC~gg~~AL~~A~~~l~ 136 (467)
+|++. |+++||+++|++|+|||.||+ ++|+....|+.++.|+++||+ .+++.+||+++ ||+||+.||.+|.++++
T Consensus 135 em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGL--r~~v~~~dL~gmGCsggv~aL~lA~~ll~ 211 (466)
T PLN00415 135 ELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKL--KTDVKTYNLSGMGCSAGAISVDLATNLLK 211 (466)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCC--CCCceEEEeccccchHHHHHHHHHHHHHH
Confidence 77777 777889999999999999985 678887799999999999998 67999999997 99999999999999999
Q ss_pred hCCCCCCEEEEEEeecc--cccCCCC------CCccccceeEEEecCCCCc----eeec-ccccccccCcccccc-----
Q 012253 137 SASWDGRYGLVVCTDSA--VYAEGPA------RPTGGAAAVAMLIGPDAPI----AFES-KLRGSHMSHAYDFYK----- 198 (467)
Q Consensus 137 a~~~~~~~aLVV~sD~~--~y~~~~~------~~t~GdGAvA~Ll~~~~~~----~~~~-~~~~~~~~~~~df~~----- 198 (467)
++ ++++||||++|.+ .+.++++ ...|||||+|+||++++.. .++. ....+++.+..+-+.
T Consensus 212 a~--~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~~d~~~~~~~~~ 289 (466)
T PLN00415 212 AN--PNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQK 289 (466)
T ss_pred hC--CCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCCChhhhcceeee
Confidence 99 6699999999997 2213322 2578999999999986421 1110 122233322222222
Q ss_pred cCCCCCCc-eecCcchHHHHHHHHHHHHHHHHHHH--------------H-hhhcCCCC--ccc----cceeccCCchHH
Q 012253 199 PNLASEYP-VVDGKLSQTCYLMALDSCYKYFCQKF--------------E-KLEGRQFS--MLD----VDYFVFHSPYNK 256 (467)
Q Consensus 199 p~~~~~~~-~vdG~~s~~~y~~a~~~~~~~~~~~~--------------~-~~~~~~~~--~~d----~d~~i~H~p~~k 256 (467)
-+ ...+. ..-.+.....-.+++......+.... . +....... ..| +++||+|+++.+
T Consensus 290 ~d-~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~~hf~iHpGGra 368 (466)
T PLN00415 290 ED-SKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRA 368 (466)
T ss_pred ec-CCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccceeEEecCCcHH
Confidence 11 00110 01111111222222222222211110 0 00000111 123 789999999999
Q ss_pred HHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchH
Q 012253 257 LVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASL 336 (467)
Q Consensus 257 ~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~ 336 (467)
+++.+.+.| +++++ ++++|+.+.+++|||+|+|+
T Consensus 369 VLdave~~L------------------------gL~~~----------------------~le~Sr~vL~r~GN~SSsSV 402 (466)
T PLN00415 369 LLDAVEKGL------------------------GLSEF----------------------DLEPSRMTLHRFGNTSSSSL 402 (466)
T ss_pred HHHHHHHHc------------------------CCCHH----------------------HHHHHHHHHHHhCCchhhhH
Confidence 999998888 56554 33566777799999999999
Q ss_pred HHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEEec
Q 012253 337 YAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQE 376 (467)
Q Consensus 337 ~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~~~ 376 (467)
+..|..+..+ ++.++|+++++++||+|++++..++++-.
T Consensus 403 ~yvL~~~~~~-~~~~~Gdrvl~iaFGpGf~~es~v~~~~~ 441 (466)
T PLN00415 403 WYELAYVEAK-CRVKRGDRVWQLAFGSGFKCNSIVWRALR 441 (466)
T ss_pred HHHHHHHHhh-ccCCCCCEEEEEEEcCcchhhHhHHHHhc
Confidence 9999999876 67789999999999999999999988765
No 38
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.94 E-value=1.8e-26 Score=223.96 Aligned_cols=236 Identities=14% Similarity=0.089 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHH
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVE 136 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~ 136 (467)
..+|+.+|++++|+++|++++|||.|+++|+++....|+.+.+|+..||+ ++..++++.++|++++.||..|.++|+
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~---~~~~~~~i~~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGI---SGGPAYSVNQACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCC---CCCCcceeccHhHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999987789999999999998 378899999999999999999999999
Q ss_pred hCCCCCCEEEEEEeecccccCCCCCCccccceeEEEecCCCCc-ee----ecccccccccCcccccccCCCCCCceecCc
Q 012253 137 SASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPI-AF----ESKLRGSHMSHAYDFYKPNLASEYPVVDGK 211 (467)
Q Consensus 137 a~~~~~~~aLVV~sD~~~y~~~~~~~t~GdGAvA~Ll~~~~~~-~~----~~~~~~~~~~~~~df~~p~~~~~~~~vdG~ 211 (467)
+|.. +++||+++|. ..+||||+|+||++.+.. .. .....+.........+. + .
T Consensus 84 ~g~~--~~~lv~~~e~---------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-------~----~ 141 (254)
T cd00327 84 NGKA--DIVLAGGSEE---------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-------P----A 141 (254)
T ss_pred CCCC--CEEEEEecce---------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC-------C----C
Confidence 9965 9999999998 678999999999986420 00 00011111111000000 0 0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCC
Q 012253 212 LSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTL 291 (467)
Q Consensus 212 ~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~ 291 (467)
. +.+.+.++.+.++++ +++.++|+|++++|+++.++.....+.+.+..
T Consensus 142 ~----~~~~~~~~i~~~l~~------ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~---------------------- 189 (254)
T cd00327 142 V----SGEGLARAARKALEG------AGLTPSDIDYVEAHGTGTPIGDAVELALGLDP---------------------- 189 (254)
T ss_pred C----ChHHHHHHHHHHHHH------cCCCHHHCCEEEccCCcCccccHHHHHHHHHH----------------------
Confidence 1 233344454444443 46889999999999999999988877763211
Q ss_pred CcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCC-------CCCEEEEEEeccc
Q 012253 292 SDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSL-------EGKRVIMFSYGSG 364 (467)
Q Consensus 292 ~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~-------~G~~ill~syGsG 364 (467)
++. +--+......++||+++||.++.|..+++. .+.. +|++++++++|.|
T Consensus 190 --~~~--------------------~~~~~~~~~~~~G~~~~as~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~g~G 246 (254)
T cd00327 190 --DGV--------------------RSPAVSATLIMTGHPLGAAGLAILDELLLM-LEHEFIPPTPREPRTVLLLGFGLG 246 (254)
T ss_pred --hCC--------------------CCCceeccccccccchHHHHHHHHHHHHHH-HhCCCcCCCCCCcCEEEEeeEcCC
Confidence 100 000112233799999999999999999876 3333 8999999999999
Q ss_pred cceeeEEE
Q 012253 365 LTATMFSL 372 (467)
Q Consensus 365 ~~~~~~~~ 372 (467)
.+++++++
T Consensus 247 g~~~~~~l 254 (254)
T cd00327 247 GTNAAVVL 254 (254)
T ss_pred CcceEEEC
Confidence 99887653
No 39
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.90 E-value=6.8e-23 Score=206.73 Aligned_cols=245 Identities=15% Similarity=0.100 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHHcCCC----cCCcCEEEEEeccCCCC---------------------CCcHHHHHHHHhcccCCCC
Q 012253 57 VISMSLTVVTSLLEKYKID----PTQIGRLEVGSETVIDK---------------------SKSIKTFLMQIFEKYGNTD 111 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~----~~~Id~Li~~Tes~~~~---------------------~ps~a~~v~~~Lgl~G~~~ 111 (467)
..+|++.|++++|+++|++ +++||.||++|.++.+. .|+.+..|+..||+ +
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~ 86 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI----H 86 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC----C
Confidence 7899999999999999999 99999999999988764 68889999999997 3
Q ss_pred eeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc--ccC--------------------CCCCCcccccee
Q 012253 112 IEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV--YAE--------------------GPARPTGGAAAV 169 (467)
Q Consensus 112 ~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~--y~~--------------------~~~~~t~GdGAv 169 (467)
..++++.++|++++.||+.|..+|++|.. +++||+++|... +.. .....++||||+
T Consensus 87 g~~~~v~~~cas~~~al~~A~~~i~~g~~--~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaa 164 (332)
T cd00825 87 GPAYDVSAACAGSLHALSLAADAVQNGKQ--DIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAG 164 (332)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEE
Confidence 45788899999999999999999999966 999999999861 100 012346799999
Q ss_pred EEEecCCCCce-----eecccccccccCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 012253 170 AMLIGPDAPIA-----FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLD 244 (467)
Q Consensus 170 A~Ll~~~~~~~-----~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d 244 (467)
|+||++.+... ....+.++... .| +..... + .. ....+..+.+..++ .++++++|
T Consensus 165 A~vL~~~~~a~~~~~~~~~~i~~~~~~--~~---~~~~~~-~----~~----~~~~~~~~i~~al~------~agl~~~d 224 (332)
T cd00825 165 ALVVEELEHALARGAHIYAEIVGTAAT--ID---GAGMGA-F----AP----SAEGLARAAKEALA------VAGLTVWD 224 (332)
T ss_pred EEEECcHHHHHHCCCeEEEEEEEEEEc--cC---CCCCCC-C----Cc----CHHHHHHHHHHHHH------HcCCCHhH
Confidence 99999754210 00001111111 11 100000 0 00 12233334444433 34799999
Q ss_pred cceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCccc
Q 012253 245 VDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLI 324 (467)
Q Consensus 245 ~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~ 324 (467)
||++++|+++.++.++..+++....+ +. +-.+...+
T Consensus 225 id~~~~h~~~~~~~~~~e~~~~~~~~-------------------~~-------------------------~~~~~~~~ 260 (332)
T cd00825 225 IDYLVAHGTGTPIGDVKELKLLRSEF-------------------GD-------------------------KSPAVSAT 260 (332)
T ss_pred CCEEEccCCCCCCCCHHHHHHHHHHh-------------------CC-------------------------CCceeECC
Confidence 99999999999988877766632211 00 00111223
Q ss_pred ccccCccccchHHHHHHHHHhhcCcCC-------------------------CCCEEEEEEeccccceeeEEE
Q 012253 325 PKQVGNMYTASLYAAFASLLHEKHSSL-------------------------EGKRVIMFSYGSGLTATMFSL 372 (467)
Q Consensus 325 ~~~~GN~~taS~~l~L~~~l~~~~~~~-------------------------~G~~ill~syGsG~~~~~~~~ 372 (467)
..++||+++||.++.|..++.. .+.. +|++++++++|.|.+++++++
T Consensus 261 ~~~~G~~~aas~~~~l~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 261 KAMTGNLSSAAVVLAVDEAVLM-LEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CcccccchhHhHHHHHHHHHHH-HhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 4799999999999999998875 3333 689999999999999887653
No 40
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.89 E-value=3.3e-23 Score=195.35 Aligned_cols=167 Identities=22% Similarity=0.309 Sum_probs=132.0
Q ss_pred CceeEEeEEEEecCCceeehhHHhhhh----CCCc-----Cee-----EEeccceEeeccCC------------------
Q 012253 6 PKNVGILALDIYFPPTCVLQEALEVHD----GVSK-----GKY-----TVGLGQDCMAFCSE------------------ 53 (467)
Q Consensus 6 ~~~vgI~ai~~y~P~~~v~~~el~~~~----g~~~-----~k~-----~~Gig~r~~av~~~------------------ 53 (467)
+....|.+||..+|+++++|+|+.+.. +.+. +++ ..||..|++.++.+
T Consensus 12 ~g~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~~ 91 (226)
T PF00195_consen 12 PGPAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLAE 91 (226)
T ss_dssp SSSEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HHH
T ss_pred CCCeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHHH
Confidence 467899999999999999999987752 3222 233 37999998765421
Q ss_pred -----CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCC-cChHHHHH
Q 012253 54 -----VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAA 127 (467)
Q Consensus 54 -----~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~-aC~gg~~A 127 (467)
.+.+..|+.+|++++|+++|++++||++||+.|+|+.. .|++..+|.++||| ++++..+.+.+ ||+||+.|
T Consensus 92 R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~-~PglD~~l~~~LgL--~~~v~R~~i~~~GC~gg~~~ 168 (226)
T PF00195_consen 92 RNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIA-APGLDARLINRLGL--RPDVQRTPIFGMGCAGGAAG 168 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSE-CS-HHHHHHHHHT----TTSEEEEEES-GGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcC-CCchhHHHHhcCCC--CCCcEEEEEeccchhhHHHH
Confidence 14578999999999999999999999999999999974 89999999999999 89999999975 99999999
Q ss_pred HHHHHHHHHhCCCCCCEEEEEEeecc--cccCC-C-C------CCccccceeEEEecCCC
Q 012253 128 LFNCVNWVESASWDGRYGLVVCTDSA--VYAEG-P-A------RPTGGAAAVAMLIGPDA 177 (467)
Q Consensus 128 L~~A~~~l~a~~~~~~~aLVV~sD~~--~y~~~-~-~------~~t~GdGAvA~Ll~~~~ 177 (467)
|..|.++.+++ |+.+|||||+|++ .|... . . ...|||||+|+||+.+|
T Consensus 169 L~~A~~~~~~~--p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 169 LRRAKDIARAN--PGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHS--TT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHhCC--ccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 99999999999 8899999999999 34321 1 1 24689999999999875
No 41
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=99.75 E-value=1.5e-17 Score=161.25 Aligned_cols=170 Identities=21% Similarity=0.332 Sum_probs=138.2
Q ss_pred CCCCceeEEeEEEEecCCc--eeehhHHhhhhC----CCcC------ee--EEeccceEeeccC------CC-------C
Q 012253 3 SWHPKNVGILALDIYFPPT--CVLQEALEVHDG----VSKG------KY--TVGLGQDCMAFCS------EV-------E 55 (467)
Q Consensus 3 ~~~~~~vgI~ai~~y~P~~--~v~~~el~~~~g----~~~~------k~--~~Gig~r~~av~~------~~-------E 55 (467)
+.||..|.+...+.|-|+. +++.+.+.++.. .+++ |+ +.|||.+.. +|+ ++ +
T Consensus 3 ~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy-~P~~~~~~p~~~s~~~a~~ 81 (290)
T PF08392_consen 3 MRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETY-LPPALHEIPPDPSLAAARE 81 (290)
T ss_pred cCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCcccc-CCcccccCCCcccHHHHHH
Confidence 4578899999999999975 688888887642 2332 12 479998865 222 11 2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCC-cChHHHHHHHHHHHH
Q 012253 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNCVNW 134 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~-aC~gg~~AL~~A~~~ 134 (467)
.+..+...|++++|+++|++|+|||.||+.+++. ...||++++|.+++|+ .+++..+++.. ||++++.+|++|.++
T Consensus 82 Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f-~ptPSLsamIvnr~~m--r~di~~~nLsGMGCsAgliai~lA~~l 158 (290)
T PF08392_consen 82 EAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLF-NPTPSLSAMIVNRYGM--RSDIKSYNLSGMGCSAGLIAIDLAKDL 158 (290)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCC-CcCCcHHHHHHHHhCC--CcCeeeecccCCcchhhHHHHHHHHHH
Confidence 3567888999999999999999999999877664 6799999999999999 88999999985 999999999999999
Q ss_pred HHhCCCCCCEEEEEEeeccc--ccCCCC------CCccccceeEEEecCCCC
Q 012253 135 VESASWDGRYGLVVCTDSAV--YAEGPA------RPTGGAAAVAMLIGPDAP 178 (467)
Q Consensus 135 l~a~~~~~~~aLVV~sD~~~--y~~~~~------~~t~GdGAvA~Ll~~~~~ 178 (467)
++.+ |+.+||||++|... +-.+++ ...|++||+|+||+..+.
T Consensus 159 L~~~--p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 159 LQAH--PNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred HHhC--CCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCcc
Confidence 9999 77999999999982 223332 357899999999998864
No 42
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.71 E-value=9.9e-16 Score=155.95 Aligned_cols=297 Identities=15% Similarity=0.066 Sum_probs=186.2
Q ss_pred eeEEeEEEEecCCce------------eehhHHhhhhCCC-cCeeE--EeccceEeeccCCCCCHHHHHHHHHHHHHHHc
Q 012253 8 NVGILALDIYFPPTC------------VLQEALEVHDGVS-KGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKY 72 (467)
Q Consensus 8 ~vgI~ai~~y~P~~~------------v~~~el~~~~g~~-~~k~~--~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~a 72 (467)
+|.|.+++...|--. +++.+.....+.+ .+++. +|+..++ + ...+....|+..|++++|+++
T Consensus 4 ~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~~~~~~--~-~~~~r~~~La~~Al~~aL~~a 80 (348)
T PRK06147 4 ALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPVPLPPP--W-RGPERLAEMAAPAIAEALEGL 80 (348)
T ss_pred ceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEeecCcCCcc--c-CchHHHHHHHHHHHHHHHHhc
Confidence 489999998888654 2333333333333 45554 3454444 3 345688999999999999999
Q ss_pred C-CCcCCcCEEEEEec-----cCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEE
Q 012253 73 K-IDPTQIGRLEVGSE-----TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGL 146 (467)
Q Consensus 73 g-i~~~~Id~Li~~Te-----s~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aL 146 (467)
+ +++++|+++++.++ ++.+..++.+..|++.||+ ..+..++++.++|.+++.||..|..+|++|.+ +.+|
T Consensus 81 ~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~--~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~--~~~l 156 (348)
T PRK06147 81 PALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGL--RLEPGSAVIARGRVSGAVALAQARRLIAAGGC--PRVL 156 (348)
T ss_pred ccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCC--CCCCCcccccccchHHHHHHHHHHHHHHcCCC--CEEE
Confidence 9 79999999998655 3445566778899999997 34456899999999999999999999999976 9999
Q ss_pred EEEeecc-c------cc--------CCCCCCccccceeEEEecCCCCc-eeecccccccccCccccc-ccCCCCCCceec
Q 012253 147 VVCTDSA-V------YA--------EGPARPTGGAAAVAMLIGPDAPI-AFESKLRGSHMSHAYDFY-KPNLASEYPVVD 209 (467)
Q Consensus 147 VV~sD~~-~------y~--------~~~~~~t~GdGAvA~Ll~~~~~~-~~~~~~~~~~~~~~~df~-~p~~~~~~~~vd 209 (467)
|+++|.. . |. +...-..+|+||+|+||++.+.- .-.....+.......+.+ ... . -| .+
T Consensus 157 vgg~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~A~~rga~i~a~g~~~~~~~~~~~~-~--~p-~~ 232 (348)
T PRK06147 157 VAGVDSLLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAGGEAPGLPLLGLGLGREPAPVGESE-D--LP-LR 232 (348)
T ss_pred EEeeccccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhhhhcCCCceEEEEEeecCCCcccCC-C--CC-CC
Confidence 9999975 2 11 11123467999999999975421 000001110011111221 110 0 01 02
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHH----HHhhhhhhhccccCchhhHHhhhc
Q 012253 210 GKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKS----FARLFFNDFLRNASSVDEIAKEKL 285 (467)
Q Consensus 210 G~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~----~~~l~~~~~~~~~~~~~~~~~~~l 285 (467)
| +.+..+++..+ +.+++.++||||++.|....+...+. ..+++ .+ ...
T Consensus 233 g--------~gl~~ai~~AL------~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f-~~---~~~---------- 284 (348)
T PRK06147 233 G--------DGLTQAIRAAL------AEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLF-RV---RKE---------- 284 (348)
T ss_pred h--------HHHHHHHHHHH------HHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHh-hh---ccC----------
Confidence 2 22333333333 33478999999999998866553332 22221 00 000
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhh-cCcCCCCCEEEEEEeccc
Q 012253 286 APYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHE-KHSSLEGKRVIMFSYGSG 364 (467)
Q Consensus 286 ~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~-~~~~~~G~~ill~syGsG 364 (467)
.. |-......+||+++|+-.+.|+..+.. .....+|.+++++|-.-.
T Consensus 285 ----~~----------------------------~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d~ 332 (348)
T PRK06147 285 ----FF----------------------------DLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDD 332 (348)
T ss_pred ----CC----------------------------ceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCCC
Confidence 00 011122679999999988888764432 123468999999998765
Q ss_pred cceeeEEEEEe
Q 012253 365 LTATMFSLQLQ 375 (467)
Q Consensus 365 ~~~~~~~~~~~ 375 (467)
-.-++++++-+
T Consensus 333 g~r~a~~l~~~ 343 (348)
T PRK06147 333 GARAALVLEYR 343 (348)
T ss_pred CceEEEEEecc
Confidence 55566676644
No 43
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.68 E-value=8.5e-17 Score=131.60 Aligned_cols=89 Identities=25% Similarity=0.331 Sum_probs=72.9
Q ss_pred hcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhh
Q 012253 236 EGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYD 315 (467)
Q Consensus 236 ~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~ 315 (467)
+++|++++|||++++||++.++.+...+.+ |+++++.+ .++
T Consensus 2 ~~~g~~~~did~~i~hq~~~~~~~~~~~~l------------------------gi~~~~~~---------~~~------ 42 (90)
T PF08541_consen 2 ERAGLSPDDIDHFIPHQASKKILDSIAKRL------------------------GIPPERFP---------DNL------ 42 (90)
T ss_dssp HHTT--GGGESEEEE-SSSHHHHHHHHHHH------------------------TS-GGGBE----------TH------
T ss_pred ccccCCHHHCCEEEeCCCCHHHHHHHHHHc------------------------CCcHHHHH---------HHH------
Confidence 456899999999999999999999988777 78877653 122
Q ss_pred hhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEEEEE
Q 012253 316 LKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQL 374 (467)
Q Consensus 316 ~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~~~~ 374 (467)
+++||+++||+|++|++++++ +++++||+|+++++|+|+++++++++|
T Consensus 43 ----------~~~Gn~~sa~~~~~L~~~~~~-g~~~~Gd~vl~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 43 ----------AEYGNTGSASIPINLADALEE-GRIKPGDRVLLVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp ----------HHH-B-GGGHHHHHHHHHHHT-TSSCTTEEEEEEEEETTTEEEEEEEE-
T ss_pred ----------hccCcchhhhHHHHHHHHHHc-CCCCCCCEEEEEEEEhhheeEEEEEEC
Confidence 799999999999999999999 789999999999999999999999987
No 44
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.63 E-value=2.1e-14 Score=141.21 Aligned_cols=182 Identities=13% Similarity=0.099 Sum_probs=124.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~ 133 (467)
++...+|+.+|+++||+++|++++|||.|++|+. +. .+..++++++.||+ + .+++.+||++++.||.+|..
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~--Q~~~As~vA~~LGI---P---~fdV~~ACSTf~~AL~lAa~ 117 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN--QIITANFVARDLGI---P---FLGLYGACSTSMETLALGAM 117 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC--cccHHHHHHHHhCC---C---EEEEeccCHHHHHHHHHHHH
Confidence 4577899999999999999999999999999973 32 34678899999986 3 49999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc-------ccc-CC--CCC---CccccceeEEEecCCCCceeecccccccccCcccccccC
Q 012253 134 WVESASWDGRYGLVVCTDSA-------VYA-EG--PAR---PTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPN 200 (467)
Q Consensus 134 ~l~a~~~~~~~aLVV~sD~~-------~y~-~~--~~~---~t~GdGAvA~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~ 200 (467)
+|++|.+ ++||||+|+.. +|. ++ ..+ ..+||||+|+||++.+. .+.+.+.-.-.+-|+-.-+
T Consensus 118 lI~SG~a--d~VLVV~Ssh~S~AErqfr~p~eyg~q~~~ta~~tgdGAGA~vl~~~~~---~~~i~~~t~gkv~d~g~~d 192 (327)
T TIGR02845 118 LVDGGFA--DRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTGG---GPRITSATIGKVVDYGITD 192 (327)
T ss_pred HHhCCCC--CEEEEEEecccchhhhhcccccccccCCCCeeeEEEcccEEEEEeecCC---CCceEEEEEEEEEecCCCC
Confidence 9999977 99999998865 344 22 122 35799999999988742 0111111122233432211
Q ss_pred CCCCCceecCcchHHHHHHHHH-HHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhh
Q 012253 201 LASEYPVVDGKLSQTCYLMALD-SCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLF 266 (467)
Q Consensus 201 ~~~~~~~vdG~~s~~~y~~a~~-~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~ 266 (467)
+. .| | .++. .+.+.+.+.+ .+.+..++|.|.++.-- -.++.++++..|+
T Consensus 193 ~~----nm-g--------aamapaa~dti~~h~---~d~~~~~~~yd~i~tgd-lg~vg~~i~~~ll 242 (327)
T TIGR02845 193 PL----DM-G--------AAMAPAAADTIEAHF---KDTGRSVDDYDLIVTGD-LARVGSEILRKLL 242 (327)
T ss_pred cc----cc-h--------hhhhHHHHHHHHHHH---HHcCCChhhccEEEecc-hHHHHHHHHHHHH
Confidence 10 01 1 1121 2222333333 34578899999988543 3455666666664
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.55 E-value=4.1e-13 Score=132.43 Aligned_cols=182 Identities=14% Similarity=0.095 Sum_probs=123.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~ 133 (467)
++...+|+.+|+++||+++|++++|||.||+|+.. . .+..++++++.||+ ..+++.+||+++..||.+|..
T Consensus 53 EkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll--~-Q~~sAs~vA~~LGI------Pa~dV~gACST~~~AL~lAa~ 123 (337)
T PRK08304 53 EKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLL--N-QIISANFAARELGI------PFLGLYGACSTMMESLALGSM 123 (337)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCC--C-CcchHHHHHHHhCC------cEEEEeccCHHHHHHHHHHHH
Confidence 55778999999999999999999999999999752 2 34678899999875 489999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc-------cccCCC--CC----CccccceeEEEecCCCCceeecccccccccCcccccccC
Q 012253 134 WVESASWDGRYGLVVCTDSA-------VYAEGP--AR----PTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPN 200 (467)
Q Consensus 134 ~l~a~~~~~~~aLVV~sD~~-------~y~~~~--~~----~t~GdGAvA~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~ 200 (467)
+|++|.+ ++||||+|+.. ||.... -+ ...++||.|+||++...- +.+.+.-.-.+-|+-.-+
T Consensus 124 lI~SG~a--d~VLVV~Ssh~s~aerqfr~P~eyg~qrp~taqwtvtGAGA~i~~~~~~~---~~i~~~t~Gkv~D~g~~d 198 (337)
T PRK08304 124 LIDGGFA--DRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSREGSG---PRITHATIGKVVDLGIKD 198 (337)
T ss_pred HHhcCCC--CEEEEEEcchhhhhhhhccCchhccccCCCcceEEeeccEEEEEecCCCC---ceEEEEeEEEEEecCCCC
Confidence 9999977 99999999976 333221 12 234999999999987520 111111112233432211
Q ss_pred CCCCCceecCcchHHHHHHHHH-HHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhh
Q 012253 201 LASEYPVVDGKLSQTCYLMALD-SCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLF 266 (467)
Q Consensus 201 ~~~~~~~vdG~~s~~~y~~a~~-~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~ 266 (467)
.. .| | .++. .+.+.+.+.+ .+.+.+++|.|.++.-- -.++.++++..|+
T Consensus 199 ~~----nm-g--------aaMapAa~dti~~h~---~d~~~~~~~yDli~tGD-lg~vG~~i~~~ll 248 (337)
T PRK08304 199 PN----DM-G--------AAMAPAAADTIQQHF---KDTGRSPEDYDLIVTGD-LGRVGREILKELL 248 (337)
T ss_pred cc----cc-h--------hhhhHHHHHHHHHHH---HHcCCChhhccEEEEcc-hHHHHHHHHHHHH
Confidence 10 01 1 1121 2223333333 44578899999988542 3455556666664
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.44 E-value=1.2e-11 Score=128.44 Aligned_cols=116 Identities=10% Similarity=0.056 Sum_probs=89.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCE----EEEEeccCCC--------------------------CCCcHHHHHHHHhc
Q 012253 56 DVISMSLTVVTSLLEKYKIDPTQIGR----LEVGSETVID--------------------------KSKSIKTFLMQIFE 105 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~agi~~~~Id~----Li~~Tes~~~--------------------------~~ps~a~~v~~~Lg 105 (467)
....|++.|++++|+++|+++++||. ++++|.++.. ..+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 35689999999999999999877664 6666655321 12457889999999
Q ss_pred ccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc--c---------------------c-CC---
Q 012253 106 KYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV--Y---------------------A-EG--- 158 (467)
Q Consensus 106 l~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~--y---------------------~-~~--- 158 (467)
+. ..++.+..+|++++.||..|..+|++|.. +.|||+++|... + . +.
T Consensus 150 l~----g~~~~v~~acas~~~Al~~A~~~i~~G~~--d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~ 223 (406)
T cd00834 150 LR----GPNYTVSTACASGAHAIGDAARLIRLGRA--DVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKD 223 (406)
T ss_pred CC----CcccccchHHHHHHHHHHHHHHHHHcCCC--CEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCC
Confidence 72 34678889999999999999999999977 999999999752 0 0 00
Q ss_pred CCCCccccceeEEEecCCC
Q 012253 159 PARPTGGAAAVAMLIGPDA 177 (467)
Q Consensus 159 ~~~~t~GdGAvA~Ll~~~~ 177 (467)
.+..+.||||+|+||++.+
T Consensus 224 ~~g~~~geGA~a~vL~~~~ 242 (406)
T cd00834 224 RDGFVLGEGAGVLVLESLE 242 (406)
T ss_pred CCCEeeeccEEEEEEecHH
Confidence 1124569999999998753
No 47
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.37 E-value=1.1e-10 Score=120.29 Aligned_cols=106 Identities=14% Similarity=0.130 Sum_probs=91.2
Q ss_pred eccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcC
Q 012253 42 GLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNAC 121 (467)
Q Consensus 42 Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC 121 (467)
|+|+..+.- ..+.+..+|+++|++++|+++|+++++||.|++++..+....+..+..++..||+ +.+.++++.++|
T Consensus 2 G~g~t~~~~-~~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl---~~~~~~~v~~~c 77 (375)
T cd00829 2 GVGMTPFGR-RSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGL---LGKPATRVEAAG 77 (375)
T ss_pred eeeecCccc-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCC---CCcceeeEeCcc
Confidence 556555432 1367899999999999999999999999999999876665456788999999998 478899999999
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 122 YGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 122 ~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
.+++.+|..|...|++|.. +.|||+++|..
T Consensus 78 ~sg~~al~~Aa~~I~sG~~--~~vlv~g~e~~ 107 (375)
T cd00829 78 ASGSAAVRAAAAAIASGLA--DVVLVVGAEKM 107 (375)
T ss_pred HHHHHHHHHHHHHHHhCCC--CEEEEEEEeec
Confidence 9999999999999999966 99999999964
No 48
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.36 E-value=2.9e-11 Score=126.42 Aligned_cols=114 Identities=18% Similarity=0.136 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----EEEEEeccCCCC-------------------CCcHHHHHHHHhcccCCCCee
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIG----RLEVGSETVIDK-------------------SKSIKTFLMQIFEKYGNTDIE 113 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id----~Li~~Tes~~~~-------------------~ps~a~~v~~~Lgl~G~~~~~ 113 (467)
...|++.|++++|+++|+++++|| .|++|+.++.+. .+..+..|+..||+.| .
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g----~ 162 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG----P 162 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCC----C
Confidence 346999999999999999999999 889998765432 3456778999999822 4
Q ss_pred EEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc------------ccC-------C---CCCCccccceeEE
Q 012253 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV------------YAE-------G---PARPTGGAAAVAM 171 (467)
Q Consensus 114 ~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~------------y~~-------~---~~~~t~GdGAvA~ 171 (467)
++.+..+|++++.||..|.++|++|.. +.+||+++|... +.. . .+....||||+|+
T Consensus 163 ~~~v~~acasg~~Al~~A~~~I~~G~~--d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (424)
T smart00825 163 SVTVDTACSSSLVALHLACQSLRSGEC--DMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVV 240 (424)
T ss_pred ccccccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEE
Confidence 688889999999999999999999977 899999999641 000 0 1124569999999
Q ss_pred EecCC
Q 012253 172 LIGPD 176 (467)
Q Consensus 172 Ll~~~ 176 (467)
||++.
T Consensus 241 VLe~~ 245 (424)
T smart00825 241 VLKRL 245 (424)
T ss_pred EEccH
Confidence 99974
No 49
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=1.8e-10 Score=119.32 Aligned_cols=107 Identities=20% Similarity=0.150 Sum_probs=90.2
Q ss_pred EEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCC--CCcHHHHHHHHhcccCCCCeeEEee
Q 012253 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK--SKSIKTFLMQIFEKYGNTDIEGVDS 117 (467)
Q Consensus 40 ~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~--~ps~a~~v~~~Lgl~G~~~~~~~di 117 (467)
..|.++..+. ...+++..+|+++|++++|+++|+++++||.|++++.++... .+..+..++..||+ +.+.++++
T Consensus 6 IvG~~~tp~~-~~~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl---~~~~~~~v 81 (389)
T PRK06064 6 IIGVGQTKFG-ELWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGL---APIPATRV 81 (389)
T ss_pred EEEcccccce-ecCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCC---CCCCeeEE
Confidence 3466665542 134678999999999999999999999999999998766442 46678899999998 46778999
Q ss_pred CCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeec
Q 012253 118 TNACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (467)
Q Consensus 118 ~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~ 152 (467)
.++|.+++.||..|..+|++|.. +.+||+++|.
T Consensus 82 ~~aCasg~~ai~~A~~~I~sG~~--~~vLv~G~e~ 114 (389)
T PRK06064 82 EAACASGGAALRQAYLAVASGEA--DVVLAAGVEK 114 (389)
T ss_pred eCCcHHHHHHHHHHHHHHHCCCC--CEEEEEEEEe
Confidence 99999999999999999999977 9999999985
No 50
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.28 E-value=3e-10 Score=111.62 Aligned_cols=181 Identities=14% Similarity=0.111 Sum_probs=117.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~ 133 (467)
++...+|+.+|+++||+++|++++|||.+++|+-+.. ..| ++++++.||+ + .+++.+||+++..||.+|..
T Consensus 51 EkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ-~ip--ssfvar~LGI---P---~~gV~gACSTg~eAL~lAa~ 121 (334)
T PRK12404 51 EKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQ-ITP--TSFAARTLGI---P---YLGLFGACSTSMEGLALAAL 121 (334)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC-cCc--HHHHHHHhCC---C---ccceeecCHHHHHHHHHHHH
Confidence 4556789999999999999999999999999998832 234 4599999886 4 48999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc-------cccCCC--CC-Ccc---ccceeEEEecCCCC-ceeecccccccccCccccccc
Q 012253 134 WVESASWDGRYGLVVCTDSA-------VYAEGP--AR-PTG---GAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKP 199 (467)
Q Consensus 134 ~l~a~~~~~~~aLVV~sD~~-------~y~~~~--~~-~t~---GdGAvA~Ll~~~~~-~~~~~~~~~~~~~~~~df~~p 199 (467)
+|++|.+ ++|||++|-=. ||.... -+ ||. =-||.|+||++... ..+ .+.-.-.+-|+-.-
T Consensus 122 ~VaSG~A--d~VLavtsSH~~~aErqfR~P~eyG~Qrp~taqwTvTgaga~~l~~~~~~~~i----~~~T~Gkv~D~g~~ 195 (334)
T PRK12404 122 IVNSGGA--KYVLTGASSHNAAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTGDGPRV----TSATIGRVVDMGLT 195 (334)
T ss_pred HHHcCCC--CEEEEEeCcccchhhhhccCcccccCcCCCcccEEEEceEEEEEecCCCCceE----EEEEEEEEEecCCC
Confidence 9999977 99999987432 555321 12 111 34566788887642 111 11112223343221
Q ss_pred CCCCCCceecCcchHHHHHHHHH-HHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhh
Q 012253 200 NLASEYPVVDGKLSQTCYLMALD-SCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLF 266 (467)
Q Consensus 200 ~~~~~~~~vdG~~s~~~y~~a~~-~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~ 266 (467)
++. .| | .++. .+++.+.+.+ .+.+..++|.|.++.- --.++.++++..|+
T Consensus 196 d~~----nM-G--------aaMAPAA~dti~~h~---~d~~~~~~~yDlI~TG-DLg~vG~~i~~~ll 246 (334)
T PRK12404 196 DPF----NM-G--------GAMAPAAVDTIEAHL---RDRQIDASYYDLIVTG-DLGHVGREIAKDLL 246 (334)
T ss_pred Ccc----cc-h--------hhhhHHHHHHHHHHH---HHhCCChhhccEEEEc-chHHHHHHHHHHHH
Confidence 110 01 1 1111 2222233332 3446889999998854 33455666666665
No 51
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.27 E-value=1.7e-11 Score=126.69 Aligned_cols=96 Identities=11% Similarity=0.135 Sum_probs=87.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~ 133 (467)
+++..+|+.+|++++|+++|++++|||.|+++|.++....|..+..++..||+ ..++.++++.++|.+++.||..|..
T Consensus 19 ~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl--~~~~~~~~v~~~c~s~~~al~~A~~ 96 (386)
T cd00751 19 DVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGL--PESVPATTVNRVCGSGLQAVALAAQ 96 (386)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCCchhhhccccHHHHHHHHHHHH
Confidence 58899999999999999999999999999999887766577788889999998 3457899999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 012253 134 WVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 134 ~l~a~~~~~~~aLVV~sD~~ 153 (467)
+|++|.. +.|||+++|.+
T Consensus 97 ~I~sG~~--~~vLv~g~e~~ 114 (386)
T cd00751 97 SIAAGEA--DVVVAGGVESM 114 (386)
T ss_pred HHHCCCC--CeEEEeeeecc
Confidence 9999977 99999999975
No 52
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.23 E-value=4.4e-11 Score=123.60 Aligned_cols=96 Identities=14% Similarity=0.172 Sum_probs=86.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~ 133 (467)
+++..+|+.+|+++||+++|++++|||.|+++|.++....|..+..++..+|+ ..++.++++.++|.+++.||..|..
T Consensus 18 ~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl--~~~~~~~~v~~~Casg~~al~~A~~ 95 (386)
T TIGR01930 18 DVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGL--PESVPAYTVNRQCASGLQAVILAAQ 95 (386)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCceeeeecchhhHHHHHHHHHHH
Confidence 58899999999999999999999999999999887665557778889999998 3458899999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 012253 134 WVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 134 ~l~a~~~~~~~aLVV~sD~~ 153 (467)
+|++|.. +++||+++|..
T Consensus 96 ~I~sG~~--~~vLv~g~e~~ 113 (386)
T TIGR01930 96 LIRAGEA--DVVVAGGVESM 113 (386)
T ss_pred HHHCCCC--CEEEEEEehhh
Confidence 9999976 99999999975
No 53
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.21 E-value=9.3e-11 Score=121.21 Aligned_cols=108 Identities=17% Similarity=0.152 Sum_probs=91.2
Q ss_pred EEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCC
Q 012253 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN 119 (467)
Q Consensus 40 ~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~ 119 (467)
..|+|+..+.- ..+++..+|+++|++++|+++|+++++||.||+++.++....+..+..++..+|+ ++..++++.+
T Consensus 5 IvG~g~t~~~~-~~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl---~~~~~~~v~~ 80 (385)
T PRK12578 5 VIGVGNSKFGR-RDDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGL---TGKVPLRVEA 80 (385)
T ss_pred EEeecccceee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCC---CCCCeeEEec
Confidence 46888776532 3578899999999999999999999999999999877643333447889999998 4456799999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 120 ACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 120 aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
+|.+++.||..|...|++|.. ++||||++|.+
T Consensus 81 ~casg~~al~~A~~~I~sG~~--~~vLvvg~e~~ 112 (385)
T PRK12578 81 MCATGLAASLTAYTAVASGLV--DMAIAVGVDKM 112 (385)
T ss_pred cCHHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 999999999999999999976 99999999974
No 54
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=1.1e-10 Score=120.64 Aligned_cols=109 Identities=16% Similarity=0.086 Sum_probs=89.2
Q ss_pred eEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCC--CcHHHHHHHHhcccCCCCeeEEe
Q 012253 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS--KSIKTFLMQIFEKYGNTDIEGVD 116 (467)
Q Consensus 39 ~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~--ps~a~~v~~~Lgl~G~~~~~~~d 116 (467)
+..|+|+..+....++++..+|+++|++++|+++|++++|||.|+++| ++.... ...+..|++.||+ ....+++
T Consensus 6 ~IvG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl---~~~~~~~ 81 (386)
T PRK08313 6 AVLGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGA---TGKPLIR 81 (386)
T ss_pred EEEEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCC---CCCceEE
Confidence 346888776522235678999999999999999999999999999987 443321 1234689999998 5567899
Q ss_pred eCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 117 i~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
+.++|.++..+++.|...|++|.+ ++||||++|..
T Consensus 82 v~~~casg~~al~~A~~~I~sG~~--~~vLVvg~e~~ 116 (386)
T PRK08313 82 VHTAGSVGGSTAVVAASLVQSGVY--RRVLAVAWEKQ 116 (386)
T ss_pred EeccCHHHHHHHHHHHHHHHCCCC--CEEEEEEEEEc
Confidence 999999999999999999999977 99999999853
No 55
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.18 E-value=2.5e-11 Score=96.97 Aligned_cols=61 Identities=25% Similarity=0.218 Sum_probs=50.3
Q ss_pred EeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-cccCCC---CCCccccceeEEEecCCC
Q 012253 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-VYAEGP---ARPTGGAAAVAMLIGPDA 177 (467)
Q Consensus 115 ~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~-~y~~~~---~~~t~GdGAvA~Ll~~~~ 177 (467)
||++++|.|++.||++|..+|+++.. ++||||++|.. .+.++. ..+++||||+|+||++++
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~--~~~Lvv~~d~~s~~~~~~~~~~~~~~gDgAaA~vl~~~~ 65 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRA--KNALVVGGDRLSRIVDRTDRQTAFIFGDGAAAVVLSRDE 65 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS---SEEEEEEEEEGGGGSHTTHHHHHTTB-EEEEEEEEEEES
T ss_pred CcccccchHHHHHHHHHHHHHhhccC--CEEEEEeeccccccccccccCcceeecchheEEEEEecC
Confidence 79999999999999999999999965 99999999998 434332 346899999999999963
No 56
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.18 E-value=1.6e-10 Score=119.75 Aligned_cols=111 Identities=12% Similarity=0.124 Sum_probs=92.4
Q ss_pred EEeccceEeecc---CCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEe
Q 012253 40 TVGLGQDCMAFC---SEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD 116 (467)
Q Consensus 40 ~~Gig~r~~av~---~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~d 116 (467)
..|.++..+.-. ..+++..+|+.+|++++|+++|++|++||.||+|+.++....+..+..++..+|+ +..+.+++
T Consensus 6 Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl--~~~~p~~~ 83 (393)
T PRK05656 6 IVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGL--PHSVPAMT 83 (393)
T ss_pred EEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCC--CCCcceEE
Confidence 345555543211 1357899999999999999999999999999999988654456678889999998 33488999
Q ss_pred eCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc
Q 012253 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV 154 (467)
Q Consensus 117 i~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~ 154 (467)
+.++|.+|+.|+..|..+|++|.. +.+||+++|.+.
T Consensus 84 V~~~Casg~~ai~~A~~~I~sG~~--d~vLv~G~E~ms 119 (393)
T PRK05656 84 LNKVCGSGLKALHLAAQAIRCGDA--EVIIAGGQENMS 119 (393)
T ss_pred ecccchhHHHHHHHHHHHHHcCCC--CEEEEEEEhhhc
Confidence 999999999999999999999976 999999999873
No 57
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.18 E-value=1.1e-08 Score=107.23 Aligned_cols=227 Identities=12% Similarity=0.041 Sum_probs=131.3
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhh--CCC---c------CeeEEeccce-EeeccC----CCCCHHHHHHHHHHHHHH
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS---K------GKYTVGLGQD-CMAFCS----EVEDVISMSLTVVTSLLE 70 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~--g~~---~------~k~~~Gig~r-~~av~~----~~Ed~~~ma~~Aa~~aL~ 70 (467)
+.|.|.++|+..|--. +.+++.+.. |.+ + ..+...++-. .+ +.. .......|++.|++++|+
T Consensus 11 ~~VvITG~G~vs~~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~aa~~Al~ 88 (425)
T PRK06501 11 PIVAVTGMGVVTSLGQ-GKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDF-LPESPFGASALSEALARLAAEEALA 88 (425)
T ss_pred cCEEEEeeeEECCCCC-CHHHHHHHHHcCCCceEcCCcccccCCCCceEEEEee-cccccccccCHHHHHHHHHHHHHHH
Confidence 4699999999998754 666655542 221 1 1111101000 00 000 011245688999999999
Q ss_pred HcCCCcCCcC------------------EEEEEeccC---------------CC-------CCCcHHHHHHHHhcccCCC
Q 012253 71 KYKIDPTQIG------------------RLEVGSETV---------------ID-------KSKSIKTFLMQIFEKYGNT 110 (467)
Q Consensus 71 ~agi~~~~Id------------------~Li~~Tes~---------------~~-------~~ps~a~~v~~~Lgl~G~~ 110 (467)
++|+++.+++ .|+.++... .. ..++++..|+..||+.
T Consensus 89 dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--- 165 (425)
T PRK06501 89 QAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLADRFGTR--- 165 (425)
T ss_pred HcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHHHHhCCC---
Confidence 9998644321 122222211 11 2356888999999972
Q ss_pred CeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc----------------cccCC-----------CCCCc
Q 012253 111 DIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA----------------VYAEG-----------PARPT 163 (467)
Q Consensus 111 ~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~----------------~y~~~-----------~~~~t 163 (467)
..++++..+|++++.||..|.++|++|.+ +.+||+++|.. ...+. .+..+
T Consensus 166 -G~~~~i~~aCaS~~~Al~~A~~~I~~G~~--d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~r~G~v 242 (425)
T PRK06501 166 -GLPISLSTACASGATAIQLGVEAIRRGET--DRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRDGFV 242 (425)
T ss_pred -CCceeecCccHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCCCCCCee
Confidence 34689999999999999999999999977 99999999941 11111 01245
Q ss_pred cccceeEEEecCCCC-----ceeecccccccccCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcC
Q 012253 164 GGAAAVAMLIGPDAP-----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGR 238 (467)
Q Consensus 164 ~GdGAvA~Ll~~~~~-----~~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~ 238 (467)
+|+||+|+||++... ..+...+.++.... ..+.... +..++. .+..+.++.+ +.+
T Consensus 243 ~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~-d~~~~~~-----~~~~~~--------~~~~ai~~AL------~~a 302 (425)
T PRK06501 243 MAEGAGALVLESLESAVARGAKILGIVAGCGEKA-DSFHRTR-----SSPDGS--------PAIGAIRAAL------ADA 302 (425)
T ss_pred eeccEEEEEECcHHHHHHCCCeEEEEEEEEEEcc-CCCCCCC-----CCCCHH--------HHHHHHHHHH------HHc
Confidence 699999999997531 00110011111110 1111110 111221 1222322222 334
Q ss_pred CCCccccceeccCCchHHHHHHH
Q 012253 239 QFSMLDVDYFVFHSPYNKLVQKS 261 (467)
Q Consensus 239 ~~~~~d~d~~i~H~p~~k~~~k~ 261 (467)
++.++|||++..|-.+.......
T Consensus 303 gi~p~dId~i~~Hgtgt~~~d~~ 325 (425)
T PRK06501 303 GLTPEQIDYINAHGTSTPENDKM 325 (425)
T ss_pred CCCHHHcCEEEecCccCcchHHH
Confidence 78999999999999887765544
No 58
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.18 E-value=1.1e-10 Score=104.29 Aligned_cols=105 Identities=18% Similarity=0.276 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhh
Q 012253 219 MALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQ 298 (467)
Q Consensus 219 ~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~ 298 (467)
+.+...+..++++ .++...|..+|++|.+..|+++.+.+.| ++++++
T Consensus 40 ~~i~~~~~~~L~~------~g~~~~~~~~wavHPGG~~ILd~v~~~L------------------------~L~~~~--- 86 (151)
T PF02797_consen 40 DNIPPFVEDLLAR------HGLSDWDILFWAVHPGGRKILDAVEEAL------------------------GLSPEQ--- 86 (151)
T ss_dssp HHHHHHHHHHHHG------GTCCSGGGSEEEEE-SSHHHHHHHHHHH------------------------TS-GGG---
T ss_pred HHHHHHHHHHHhh------hcccccccceeeecCChHHHHHHHHHHc------------------------CCCHHH---
Confidence 3455555555443 3455456678999999999999999888 666653
Q ss_pred hhhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhh---cCcCC---CCCEEEEEEeccccceeeEEE
Q 012253 299 SRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHE---KHSSL---EGKRVIMFSYGSGLTATMFSL 372 (467)
Q Consensus 299 ~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~---~~~~~---~G~~ill~syGsG~~~~~~~~ 372 (467)
+++|+.+.+++|||+|++++..|..++++ .+... .++++++++||+|++.+++++
T Consensus 87 -------------------l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lL 147 (151)
T PF02797_consen 87 -------------------LRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLL 147 (151)
T ss_dssp -------------------GHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEE
T ss_pred -------------------HHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEE
Confidence 45667778999999999999999999883 12222 248999999999999999999
Q ss_pred EEe
Q 012253 373 QLQ 375 (467)
Q Consensus 373 ~~~ 375 (467)
+-.
T Consensus 148 r~~ 150 (151)
T PF02797_consen 148 RSV 150 (151)
T ss_dssp EE-
T ss_pred eeC
Confidence 854
No 59
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.18 E-value=4e-10 Score=117.56 Aligned_cols=114 Identities=14% Similarity=0.106 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEEEeccCCC-------------------CCCcHHHHHHHHhcccCCCCee
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGR----LEVGSETVID-------------------KSKSIKTFLMQIFEKYGNTDIE 113 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~----Li~~Tes~~~-------------------~~ps~a~~v~~~Lgl~G~~~~~ 113 (467)
...|++.|++++|+++|+++++++. +++||.++.+ ..+..+..|...||+. ..
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~----g~ 162 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR----GP 162 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC----CC
Confidence 4789999999999999999888775 7778765431 1134677899999872 25
Q ss_pred EEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-------c------------cCC---CCCCccccceeEE
Q 012253 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y------------AEG---PARPTGGAAAVAM 171 (467)
Q Consensus 114 ~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-------y------------~~~---~~~~t~GdGAvA~ 171 (467)
++.+..+|++++.||..|..+|++|.+ +.+||+++|... + .+. .+..+.||||+|+
T Consensus 163 ~~~v~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (421)
T cd00833 163 SLTVDTACSSSLVALHLACQSLRSGEC--DLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVV 240 (421)
T ss_pred ceeeccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEEE
Confidence 788889999999999999999999977 999999999741 0 001 1234579999999
Q ss_pred EecCC
Q 012253 172 LIGPD 176 (467)
Q Consensus 172 Ll~~~ 176 (467)
||++.
T Consensus 241 vL~~~ 245 (421)
T cd00833 241 VLKRL 245 (421)
T ss_pred EEeeH
Confidence 99875
No 60
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.15 E-value=2.5e-10 Score=118.19 Aligned_cols=97 Identities=7% Similarity=0.036 Sum_probs=84.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHH
Q 012253 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (467)
Q Consensus 53 ~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~ 132 (467)
.+++..+|+.+|++++|+++|++|++||.||+|+.++.......+..++..+|+ +.++.++++.++|.+|..||..|.
T Consensus 22 ~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl--~~~~p~~~V~~~CaSg~~Al~~A~ 99 (393)
T PRK08235 22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGI--PWEVQTETVNKVCASGLRAVTLAD 99 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCC--CCCcceeehhhhhhHHHHHHHHHH
Confidence 367899999999999999999999999999999987632233455577888887 457899999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 012253 133 NWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~ 153 (467)
.+|++|.. +.+||+++|.+
T Consensus 100 ~~I~sG~~--d~vLvvG~E~m 118 (393)
T PRK08235 100 QIIRAGDA--SVIVAGGMESM 118 (393)
T ss_pred HHHHCCCC--CEEEEEeeecc
Confidence 99999976 99999999976
No 61
>PRK09051 beta-ketothiolase; Provisional
Probab=99.12 E-value=3.5e-10 Score=117.07 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=84.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCC-CcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHH
Q 012253 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS-KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 53 ~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~-ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A 131 (467)
.+++..+|+.+|++++|+++|++|++||.||+|+.++.... +..+..+...+|+ +.++.++++.++|.+|+.|+..|
T Consensus 23 ~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~V~~aCaSg~~Al~~A 100 (394)
T PRK09051 23 KDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGV--PQETPAFNVNRLCGSGLQAIVSA 100 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCC--CCCCceEEecccchHHHHHHHHH
Confidence 36789999999999999999999999999999998875533 3455566666677 44688999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 012253 132 VNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 132 ~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
..+|++|.+ +.+||+++|.+
T Consensus 101 ~~~I~sG~~--d~vLvvG~E~m 120 (394)
T PRK09051 101 AQAILLGDA--DVAIGGGAESM 120 (394)
T ss_pred HHHHHcCCC--CEEEEEeehhc
Confidence 999999977 99999999976
No 62
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.11 E-value=4.4e-09 Score=109.44 Aligned_cols=116 Identities=13% Similarity=0.045 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCC-cC----EEEEEeccCC----------------------CCC--CcHHHHHHHHhcc
Q 012253 56 DVISMSLTVVTSLLEKYKIDPTQ-IG----RLEVGSETVI----------------------DKS--KSIKTFLMQIFEK 106 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~agi~~~~-Id----~Li~~Tes~~----------------------~~~--ps~a~~v~~~Lgl 106 (467)
....|++.|++++|+++|+++++ ++ .++++|..+. ... ..++..|...||+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45689999999999999998765 33 3555654321 111 4567789999887
Q ss_pred cCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc------cc-----------------CCC---C
Q 012253 107 YGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV------YA-----------------EGP---A 160 (467)
Q Consensus 107 ~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~------y~-----------------~~~---~ 160 (467)
.+-.++.+..+|++++.||..|.++|++|.. +.+||+++|... |. +.. +
T Consensus 151 ---~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~~ 225 (407)
T cd00828 151 ---SHGPIKTPVGACATALEALDLAVEAIRSGKA--DIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRD 225 (407)
T ss_pred ---CCCCCcCcccHHHHHHHHHHHHHHHHHcCCC--CEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCCC
Confidence 2345678899999999999999999999977 999999999752 10 000 1
Q ss_pred CCccccceeEEEecCC
Q 012253 161 RPTGGAAAVAMLIGPD 176 (467)
Q Consensus 161 ~~t~GdGAvA~Ll~~~ 176 (467)
-...|+||+|+||++.
T Consensus 226 G~~~gEGAaalvLe~~ 241 (407)
T cd00828 226 GFVEAEGAGVLVLERA 241 (407)
T ss_pred cEEeecceEEEEEeeH
Confidence 1345999999999975
No 63
>PRK06059 lipid-transfer protein; Provisional
Probab=99.11 E-value=4.7e-10 Score=116.53 Aligned_cols=107 Identities=15% Similarity=0.095 Sum_probs=89.4
Q ss_pred EEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCC-CCcHHHHHHHHhcccCCCCeeEEeeC
Q 012253 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDST 118 (467)
Q Consensus 40 ~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~-~ps~a~~v~~~Lgl~G~~~~~~~di~ 118 (467)
..|.+...+. ...++..+|+++|++++|+++|+++++||.|++++..+... .+..+.+|++.||+ ..+.++++.
T Consensus 8 Ivg~~~t~~~--r~~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~---~~~~~~~v~ 82 (399)
T PRK06059 8 ILGAGMHPWG--KWGRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGW---NGAPVSSSY 82 (399)
T ss_pred EEEecccccC--CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCC---CCCceeccc
Confidence 3466655543 23577899999999999999999999999999887665433 34567899999997 557789999
Q ss_pred CcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 119 ~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
++|.+++.||..|..+|++|.. +.+|||++|..
T Consensus 83 ~~Casg~~al~~A~~~I~sG~~--~~vLvvg~e~~ 115 (399)
T PRK06059 83 AACASGSQALQSARAQILAGLC--DVALVVGADTT 115 (399)
T ss_pred chhHHHHHHHHHHHHHHHCCCC--CEEEEEEEccc
Confidence 9999999999999999999976 99999999975
No 64
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.11 E-value=3e-10 Score=118.07 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=88.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~ 133 (467)
+++..+|+.+|++++|+++++++++||.|++|+.++....+.++..++..+|+ +.++.++++.++|.+|+.||..|..
T Consensus 23 ~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl--~~~~p~~~V~~~CaSg~~Al~~A~~ 100 (404)
T PRK06205 23 DVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGL--PVTVPGMQLDRRCGSGLQAVITAAM 100 (404)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCCceeehhhhhhHHHHHHHHHHH
Confidence 57899999999999999999999999999999998877778888889999997 4468899999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 012253 134 WVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 134 ~l~a~~~~~~~aLVV~sD~~ 153 (467)
+|++|.+ +.+||+++|..
T Consensus 101 ~I~sG~~--d~vLv~G~E~m 118 (404)
T PRK06205 101 QVQTGAA--DVVIAGGAESM 118 (404)
T ss_pred HHHcCCC--CEEEEeeehhh
Confidence 9999977 99999999976
No 65
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.10 E-value=3.7e-10 Score=116.83 Aligned_cols=98 Identities=13% Similarity=0.148 Sum_probs=88.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCc-HHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHH
Q 012253 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKS-IKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 53 ~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps-~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A 131 (467)
.++++.+|+..|++++|+++|++|++||.||+|+.++....++ ++..+...+|+ +.++.++++.++|.+|..||.+|
T Consensus 23 ~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl--~~~~p~~~V~~aCaSg~~Al~~A 100 (392)
T PRK07108 23 NMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGL--PVTVPGMTVNRFCSSGLQTIALA 100 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCC--CCCCceeeecchhhHHHHHHHHH
Confidence 4677899999999999999999999999999999887765555 78888888888 45699999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeeccc
Q 012253 132 VNWVESASWDGRYGLVVCTDSAV 154 (467)
Q Consensus 132 ~~~l~a~~~~~~~aLVV~sD~~~ 154 (467)
...|++|.+ +.+||++.|.+.
T Consensus 101 ~~~I~sG~~--d~vlagGvE~ms 121 (392)
T PRK07108 101 AQRVIAGEG--DVFVAGGVESIS 121 (392)
T ss_pred HHHHHCCCC--CEEEEEEEeccC
Confidence 999999976 999999999884
No 66
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.10 E-value=7.9e-09 Score=107.50 Aligned_cols=114 Identities=14% Similarity=0.101 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEEEeccCCC-----------------CC---------CcHHHHHHHHhcc
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGR----LEVGSETVID-----------------KS---------KSIKTFLMQIFEK 106 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~----Li~~Tes~~~-----------------~~---------ps~a~~v~~~Lgl 106 (467)
...|++.|++++|+++|+++++||. ++++|..+.. .. -..+.+|...||+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 3679999999999999999998886 7777643210 00 1245678888887
Q ss_pred cCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc----------------ccCCC-----------
Q 012253 107 YGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV----------------YAEGP----------- 159 (467)
Q Consensus 107 ~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~----------------y~~~~----------- 159 (467)
. ..++.+..+|++++.||..|..+|++|.. +.+||+++|... +...+
T Consensus 151 ~----g~~~~v~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 224 (407)
T TIGR03150 151 K----GPNHAVVTACATGTHAIGDAFRLIQRGDA--DVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR 224 (407)
T ss_pred C----CcccccccHHHHHHHHHHHHHHHHhcCCC--CEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC
Confidence 3 23566678999999999999999999976 999999999620 11100
Q ss_pred CCCccccceeEEEecCC
Q 012253 160 ARPTGGAAAVAMLIGPD 176 (467)
Q Consensus 160 ~~~t~GdGAvA~Ll~~~ 176 (467)
+..+.||||+|+||.+.
T Consensus 225 ~g~~~gEGAaalvL~~~ 241 (407)
T TIGR03150 225 DGFVMGEGAGVLVLEEL 241 (407)
T ss_pred CcEEEeceEEEEEEeeH
Confidence 12345999999999875
No 67
>PRK05790 putative acyltransferase; Provisional
Probab=99.08 E-value=7.7e-10 Score=114.71 Aligned_cols=110 Identities=10% Similarity=0.104 Sum_probs=88.2
Q ss_pred EEeccceEeeccC---CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEe
Q 012253 40 TVGLGQDCMAFCS---EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD 116 (467)
Q Consensus 40 ~~Gig~r~~av~~---~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~d 116 (467)
..|.++..+.-.. .+++..+|+++|++++|+++|++++|||.|++++.++....+..+..++..+|+ ..++.+++
T Consensus 6 IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl--~~~~~~~~ 83 (393)
T PRK05790 6 IVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGL--PVEVPALT 83 (393)
T ss_pred EEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCC--CCCCceee
Confidence 3466655543211 258899999999999999999999999999999876543334445556667776 33578999
Q ss_pred eCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 117 i~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
+.++|.+++.||..|..+|++|.. +.+||+++|..
T Consensus 84 v~~~Casg~~al~~A~~~I~sG~~--d~vLv~G~e~~ 118 (393)
T PRK05790 84 INKVCGSGLKAVALAAQAIRAGDA--DIVVAGGQESM 118 (393)
T ss_pred ecccchHHHHHHHHHHHHHHcCCC--CEEEEEeeecc
Confidence 999999999999999999999977 99999999975
No 68
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.08 E-value=6.6e-10 Score=115.17 Aligned_cols=96 Identities=14% Similarity=0.099 Sum_probs=83.1
Q ss_pred CCCHHHHHHHHHHHHHHHc-CCCcCCcCEEEEEeccCCCCCCcHHHHHH-HHhcccCCCCeeEEeeCCcChHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKY-KIDPTQIGRLEVGSETVIDKSKSIKTFLM-QIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~a-gi~~~~Id~Li~~Tes~~~~~ps~a~~v~-~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A 131 (467)
+++..+|+.+|++++|+++ |+++++||.||+|+.++....+.....+. ..+|+ +..+.+++|.++|.+|+.|+..|
T Consensus 28 ~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl--~~~~p~~~V~~aCaSg~~Al~~A 105 (399)
T PRK09052 28 NTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGL--PNSVGGVTVNRFCASGLQAVAMA 105 (399)
T ss_pred CCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCC--CCCCceeeecchhhHHHHHHHHH
Confidence 5789999999999999997 99999999999998887655555566654 44476 33588999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 012253 132 VNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 132 ~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
..+|++|.+ +.+||+++|.+
T Consensus 106 ~~~I~sG~~--d~vLv~G~E~m 125 (399)
T PRK09052 106 ADRIRVGEA--DVMIAAGVESM 125 (399)
T ss_pred HHHHHCCCC--CEEEEEEEecc
Confidence 999999976 99999999976
No 69
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.05 E-value=1.2e-09 Score=114.20 Aligned_cols=96 Identities=10% Similarity=0.119 Sum_probs=85.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~ 133 (467)
+.+..+|+.+|++++|+++|+++++||.||+++.++....+..+..++..+|+ ..++.++++.++|++++.||..|..
T Consensus 24 ~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl--~~~~p~~~v~~~CaSg~~al~~A~~ 101 (426)
T PRK08170 24 PFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGC--GEKVPAWTVQRNCASGMQALDSAAA 101 (426)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCc--CCCceeeeccchhhHHHHHHHHHHH
Confidence 46899999999999999999999999999999877544456777889999998 4568899999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 012253 134 WVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 134 ~l~a~~~~~~~aLVV~sD~~ 153 (467)
.|++|.. +.+||+++|.+
T Consensus 102 ~I~sG~~--d~vLv~G~E~m 119 (426)
T PRK08170 102 NIALGRA--DLVLAGGVEAM 119 (426)
T ss_pred HHHCCCC--CEEEEEEEecc
Confidence 9999976 99999999975
No 70
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.05 E-value=9.9e-10 Score=113.71 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=84.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCC-CcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHH
Q 012253 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS-KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 53 ~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~-ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A 131 (467)
.+.++.+|+..|++++|++++++|++||.||+|+.++.... ...+......+|+ +.++.+++|+++|.+|+.||.+|
T Consensus 24 ~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl--~~~~pa~~Vn~aCaSg~~Ai~~A 101 (402)
T PRK08242 24 HEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGL--PETVPGVQINRFCASGLEAVNLA 101 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCC--CCCCCeEEEcchhhhHHHHHHHH
Confidence 35678999999999999999999999999999999875432 3355556677777 56799999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 012253 132 VNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 132 ~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
..+|++|.. +.+||+++|.+
T Consensus 102 ~~~I~sG~~--d~vLv~G~E~m 121 (402)
T PRK08242 102 AAKVRSGWD--DLVIAGGVESM 121 (402)
T ss_pred HHHHHcCCC--CEEEEEEEEcc
Confidence 999999976 99999999987
No 71
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.02 E-value=1.9e-09 Score=111.49 Aligned_cols=107 Identities=12% Similarity=0.038 Sum_probs=89.8
Q ss_pred eEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCC--CCCcHHHHHHHHhcccCCCCeeEEe
Q 012253 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVID--KSKSIKTFLMQIFEKYGNTDIEGVD 116 (467)
Q Consensus 39 ~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~--~~ps~a~~v~~~Lgl~G~~~~~~~d 116 (467)
+..|+|+..+.- ..+++..+|+.+|++++|+++|++++|||.+++++. +.. ..+..+..+++.||+ ....+++
T Consensus 12 aIvG~g~t~~~~-~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~-~~~~~~~~~~a~~l~~~lG~---~~~~~~~ 86 (392)
T PRK06065 12 AVIGAGLTLFRR-RLLETPQELAWEAASKALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLSHGSGG---IRKPVSR 86 (392)
T ss_pred EEEEecccCCcC-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-CCcccccccHHHHHHHHcCC---CCCCeEE
Confidence 457888877543 356889999999999999999999999999999863 222 245678889999987 3466889
Q ss_pred eCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeec
Q 012253 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (467)
Q Consensus 117 i~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~ 152 (467)
+.++|+++..||..|...|++|.. +.||||++|.
T Consensus 87 V~~~gasG~~al~~A~~~I~sG~a--d~vLVvg~e~ 120 (392)
T PRK06065 87 VYVGGATGVMTAIAGWYHVASGLC--QKVLAVAEEK 120 (392)
T ss_pred EecCchhHHHHHHHHHHHHhCCCC--CEEEEEEeec
Confidence 999999999999999999999977 9999999886
No 72
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.99 E-value=1.9e-09 Score=111.73 Aligned_cols=95 Identities=11% Similarity=0.056 Sum_probs=82.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHH-HHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKT-FLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~-~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~ 132 (467)
.+.+.+|+.+|++++|++++++|++||.||+++.++....+..+. .+++.+|+ .++.++++.++|++|+.||..|.
T Consensus 20 ~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~---~~~p~~~V~~~Casg~~al~~A~ 96 (393)
T cd00826 20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGL---QEAPAIGMNNLCGSGLRALALAM 96 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCC---CCCcEEEecchhHHHHHHHHHHH
Confidence 466799999999999999999999999999999887654445554 36777665 67889999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 012253 133 NWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~ 153 (467)
.+|++|.. +.+||+++|..
T Consensus 97 ~~I~sG~~--~~vlv~g~e~~ 115 (393)
T cd00826 97 QLIAGGDA--NCILAGGFEKM 115 (393)
T ss_pred HHHHCCCC--CEEEEEeeecc
Confidence 99999976 99999999986
No 73
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=98.97 E-value=3.4e-09 Score=109.96 Aligned_cols=96 Identities=11% Similarity=0.115 Sum_probs=80.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccC-CCCeeEEeeCCcChHHHHHHHHH
Q 012253 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 53 ~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G-~~~~~~~di~~aC~gg~~AL~~A 131 (467)
.+.++.+|+.+|++++|+++|++|++||.+|+|+..+... +.....+..+++ | +.++.++++.++|++|+.|+..|
T Consensus 27 ~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~--~~~~~~~~~l~a-g~~~~~p~~~V~~aCaSG~~Av~~A 103 (397)
T PRK06954 27 ASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQ--GQAPARQAALGA-GLPLSVGCTTVNKMCGSGMRAAMFA 103 (397)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCcc--chHHHHHHHHcC-CCCCCccEeeccccchHHHHHHHHH
Confidence 3567899999999999999999999999999998776543 333334445554 3 33589999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 012253 132 VNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 132 ~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
..+|++|.+ +.+||+++|.+
T Consensus 104 ~~~I~sG~~--d~vLv~G~E~m 123 (397)
T PRK06954 104 HDMLVAGSV--DVIVAGGMESM 123 (397)
T ss_pred HHHHHCCCC--CEEEEEeeecc
Confidence 999999976 99999999977
No 74
>PRK06158 thiolase; Provisional
Probab=98.95 E-value=4.2e-09 Score=108.86 Aligned_cols=101 Identities=10% Similarity=-0.034 Sum_probs=84.5
Q ss_pred eEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC
Q 012253 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (467)
Q Consensus 39 ~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~ 118 (467)
+..|+|+..+.- .++++..+|+.+|++++|+++|++++|||.|++++.. +..|+ ..|++.||+ +....+++.
T Consensus 11 aIvG~g~t~~~~-~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~--~~~~~--~~la~~lGl---~~~~~~~~~ 82 (384)
T PRK06158 11 AIVGAATAGLGE-APGLSAMELLAQAAHRALADAGLTMADVDGLFTASPD--DALWG--LSVAEYLGI---RPRFVDGTM 82 (384)
T ss_pred EEEEeeecccee-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC--CCCcH--HHHHHHcCC---CCeeecccc
Confidence 456888876532 3578899999999999999999999999999998743 22343 579999998 556778888
Q ss_pred CcChHHHHHHHHHHHHHHhCCCCCCEEEEEE
Q 012253 119 NACYGGTAALFNCVNWVESASWDGRYGLVVC 149 (467)
Q Consensus 119 ~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~ 149 (467)
.+|.++..+|..|...|++|.+ ++|||+.
T Consensus 83 ~g~~s~~~al~~A~~~I~sG~~--d~vLV~~ 111 (384)
T PRK06158 83 IGGSSFLAHLLPAALALEAGLC--DVALICY 111 (384)
T ss_pred CccHHHHHHHHHHHHHHHcCCC--CEEEEee
Confidence 9999999999999999999977 9999983
No 75
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=98.95 E-value=3.9e-08 Score=102.55 Aligned_cols=90 Identities=19% Similarity=0.176 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHcCCC---cCCcCEEEEEecc---------------CCCCCC---------cHHHHHHHHhcccCC
Q 012253 57 VISMSLTVVTSLLEKYKID---PTQIGRLEVGSET---------------VIDKSK---------SIKTFLMQIFEKYGN 109 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~---~~~Id~Li~~Tes---------------~~~~~p---------s~a~~v~~~Lgl~G~ 109 (467)
...|++.|++++|+++|++ +++|+.++.++.. +....| ..+..|...||+.|
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G- 158 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG- 158 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC-
Confidence 5679999999999999986 4566665543321 111112 25567888998733
Q ss_pred CCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeec
Q 012253 110 TDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (467)
Q Consensus 110 ~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~ 152 (467)
.++.+..+|++++.||..|..+|++|.. +.+||+++|.
T Consensus 159 ---~~~tv~~acas~~~Al~~A~~~I~~G~~--d~~lv~g~~~ 196 (410)
T PRK07103 159 ---EGFTVGGASASGQLAVIQAARLVQSGSV--DACIAVGALM 196 (410)
T ss_pred ---CcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecccc
Confidence 3566889999999999999999999977 8999999874
No 76
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.92 E-value=6.1e-09 Score=108.36 Aligned_cols=94 Identities=17% Similarity=0.163 Sum_probs=76.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCC-----CcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHH
Q 012253 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS-----KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAA 127 (467)
Q Consensus 53 ~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~-----ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~A 127 (467)
.+++..+|+++|++++|+++|+++++||.+|++|++++... ++....+ ..++ ..+.++++.++|.+++.|
T Consensus 22 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~--~~~~---~g~~~~~v~~~Casg~~a 96 (403)
T PRK06289 22 EGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATV--HPAL---WGVPASRHEAACASGSVA 96 (403)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHH--hhcC---CCCceeecccccHHHHHH
Confidence 57889999999999999999999999999999988765322 1111211 2233 345689999999999999
Q ss_pred HHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 128 LFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 128 L~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
|..|..+|++|.+ ++||||++|..
T Consensus 97 l~~Aa~~I~sG~~--~~VLvvg~e~~ 120 (403)
T PRK06289 97 TLAAMADLRAGRY--DVALVVGVELM 120 (403)
T ss_pred HHHHHHHHHcCCC--CEEEEEEEEec
Confidence 9999999999977 99999998874
No 77
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.92 E-value=8e-09 Score=106.99 Aligned_cols=109 Identities=18% Similarity=0.152 Sum_probs=84.8
Q ss_pred eEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCC--CCcHHHHHHHHhcccCCCCeeEEe
Q 012253 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK--SKSIKTFLMQIFEKYGNTDIEGVD 116 (467)
Q Consensus 39 ~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~--~ps~a~~v~~~Lgl~G~~~~~~~d 116 (467)
+..|.++..+.- ..+++..+|+++|++++|+++|+++++||.|++++..+... .+..+..+...+++ ..+.+++
T Consensus 5 ~Ivg~g~tpfgr-~~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl---~~~p~~~ 80 (389)
T PRK07516 5 SIVGWAHTPFGK-LDAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPAL---RFKPATR 80 (389)
T ss_pred EEEeCCcceeee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCC---CCCceee
Confidence 345677666543 34688999999999999999999999999999987643211 11122233334454 6678999
Q ss_pred eCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 117 i~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
+.++|.+++.||..|..+|++|.+ +++||+++|..
T Consensus 81 v~~~CaSg~~Al~~A~~~I~sG~~--d~vLvvg~e~~ 115 (389)
T PRK07516 81 VENACATGSAAVYAALDAIEAGRA--RIVLVVGAEKM 115 (389)
T ss_pred eccccHHHHHHHHHHHHHHHCCCC--CEEEEEEehhh
Confidence 999999999999999999999977 99999999975
No 78
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.90 E-value=7.3e-09 Score=101.58 Aligned_cols=97 Identities=18% Similarity=0.138 Sum_probs=84.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHH
Q 012253 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (467)
Q Consensus 53 ~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~ 132 (467)
.+.++.+|+..|++.+|++++++|++||.|++|+..+....+.++..+.-..|+ +..+.++.+.++|.+|+.||..|.
T Consensus 22 ~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl--~~~vp~~~V~~~CaSG~~Av~~a~ 99 (264)
T PF00108_consen 22 ADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGL--PESVPATTVNRACASGLQAVHLAA 99 (264)
T ss_dssp TTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS---TTSEEEEEE-GGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhccc--ccccceeeehhhhhHHHHHHHHhh
Confidence 367899999999999999999999999999999988866666777777778887 678999999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 012253 133 NWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~ 153 (467)
..|++|.. +.+|+++.|.+
T Consensus 100 ~~I~sG~~--dvvlagGvE~m 118 (264)
T PF00108_consen 100 MAIASGEA--DVVLAGGVESM 118 (264)
T ss_dssp HHHHTTS---SEEEEEEEEET
T ss_pred hhhcCCCc--cEEEEeccccc
Confidence 99999976 99999999998
No 79
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.87 E-value=1.1e-07 Score=99.31 Aligned_cols=163 Identities=13% Similarity=0.103 Sum_probs=105.9
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhh--CCCc----CeeE-EeccceEee-cc--------CCC-----CCHHHHHHHHH
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHD--GVSK----GKYT-VGLGQDCMA-FC--------SEV-----EDVISMSLTVV 65 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~--g~~~----~k~~-~Gig~r~~a-v~--------~~~-----Ed~~~ma~~Aa 65 (467)
+.|-|.++++.+|-- .+.+++.+.. |.+. .+|. .+...+... ++ ++. .....|++.|+
T Consensus 2 ~~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa 80 (411)
T PRK07314 2 RRVVVTGLGAVSPLG-NDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAAA 80 (411)
T ss_pred CcEEEEcceEECCCc-CCHHHHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhhcCCHHHhhcCCHHHHHHHHHH
Confidence 469999999999975 4666655542 2210 1110 000000000 00 111 12467999999
Q ss_pred HHHHHHcCCCcCCcC----EEEEEeccCC---------------------C----CC-CcHHHHHHHHhcccCCCCeeEE
Q 012253 66 TSLLEKYKIDPTQIG----RLEVGSETVI---------------------D----KS-KSIKTFLMQIFEKYGNTDIEGV 115 (467)
Q Consensus 66 ~~aL~~agi~~~~Id----~Li~~Tes~~---------------------~----~~-ps~a~~v~~~Lgl~G~~~~~~~ 115 (467)
+++|+++|++++++| .++++|..+. . .. ...+.+|...||+.| .++
T Consensus 81 ~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~G----p~~ 156 (411)
T PRK07314 81 KQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKG----PNH 156 (411)
T ss_pred HHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCC----ccc
Confidence 999999999998888 5777775321 0 01 125568889998733 345
Q ss_pred eeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-------c---------cCCC-----------CCCccccce
Q 012253 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y---------AEGP-----------ARPTGGAAA 168 (467)
Q Consensus 116 di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-------y---------~~~~-----------~~~t~GdGA 168 (467)
-+..+|++++.||..|..+|++|.. +.|||.++|... | ...+ +....||||
T Consensus 157 tv~~acaSgl~Al~~A~~~I~~G~~--d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~geGA 234 (411)
T PRK07314 157 SIVTACATGAHAIGDAARLIAYGDA--DVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGA 234 (411)
T ss_pred cchhhhHHHHHHHHHHHHHHhcCCC--CEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEEceE
Confidence 5667999999999999999999977 899999998631 0 0000 113459999
Q ss_pred eEEEecCC
Q 012253 169 VAMLIGPD 176 (467)
Q Consensus 169 vA~Ll~~~ 176 (467)
+|+||.+.
T Consensus 235 aavvL~~~ 242 (411)
T PRK07314 235 GILVLEEL 242 (411)
T ss_pred EEEEEeeH
Confidence 99999874
No 80
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.87 E-value=5.1e-07 Score=93.14 Aligned_cols=223 Identities=16% Similarity=0.190 Sum_probs=128.5
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhh--CCC---c-CeeE--EeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCc--
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS---K-GKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDP-- 76 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~--g~~---~-~k~~--~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~-- 76 (467)
+.|-|.++|+..|--. .+++.+.. |.+ + ..|. ...-..... ........++..|++++|+++|+++
T Consensus 2 ~rVvITG~G~vsp~G~--~~~~~~~l~~G~sgi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~Al~dagl~~~~ 77 (381)
T PRK05952 2 MKVVVTGIGLVSALGD--LEQSWQRLLQGKSGIKLHQPFPELPPLPLGLIG--NQPSSLEDLTKTVVTAALKDAGLTPPL 77 (381)
T ss_pred CeEEEEeeEEECcccC--HHHHHHHHHcCCCCeEeCCcccccccccceeec--cccccccHHHHHHHHHHHHhcCCCCCC
Confidence 5799999999999886 55554442 221 1 0110 000000000 0011233467789999999999864
Q ss_pred CCcCEEEEEeccCC--------------------CCC--------C-cHHHHHHHHhcccCCCCeeEEeeCCcChHHHHH
Q 012253 77 TQIGRLEVGSETVI--------------------DKS--------K-SIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAA 127 (467)
Q Consensus 77 ~~Id~Li~~Tes~~--------------------~~~--------p-s~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~A 127 (467)
++++ +++||..+. +.. + .++..|...|++.| .++-+..+|++++.|
T Consensus 78 ~~~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G----p~~ti~~aCasg~~A 152 (381)
T PRK05952 78 TDCG-VVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG----PVLAPMAACATGLWA 152 (381)
T ss_pred CCEE-EEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC----ccccccchhHHHHHH
Confidence 4444 556664331 001 1 24677888888844 356678999999999
Q ss_pred HHHHHHHHHhCCCCCCEEEEEEeecc--c-----cc------CC-----C---CCCccccceeEEEecCCCC-----cee
Q 012253 128 LFNCVNWVESASWDGRYGLVVCTDSA--V-----YA------EG-----P---ARPTGGAAAVAMLIGPDAP-----IAF 181 (467)
Q Consensus 128 L~~A~~~l~a~~~~~~~aLVV~sD~~--~-----y~------~~-----~---~~~t~GdGAvA~Ll~~~~~-----~~~ 181 (467)
|..|.++|++|.. +.+||.++|.. . +. .. + +-...|+||+++||++... ..+
T Consensus 153 i~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~G~v~gEGaa~lvLe~~~~A~~rg~~i 230 (381)
T PRK05952 153 IAQGVELIQTGQC--QRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQREGLVLGEGGAILVLESAELAQKRGAKI 230 (381)
T ss_pred HHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCCCccccccEEEEEEeeHHHHHhCCCce
Confidence 9999999999976 89999999963 1 11 00 1 1134699999999987531 000
Q ss_pred eccccccccc-CcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHH
Q 012253 182 ESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQK 260 (467)
Q Consensus 182 ~~~~~~~~~~-~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k 260 (467)
...+.+.... +......| ..++.. -.+++. ..+ +++++.++|||++..|-...+..+.
T Consensus 231 ~a~I~g~~~~~d~~~~~~~-------~~~~~~----~~~ai~----~Al------~~agi~p~dId~i~~hgtgt~~~D~ 289 (381)
T PRK05952 231 YGQILGFGLTCDAYHMSAP-------EPDGKS----AIAAIQ----QCL------ARSGLTPEDIDYIHAHGTATRLNDQ 289 (381)
T ss_pred EEEEEEEEecCCCCCCCCC-------CCCHHH----HHHHHH----HHH------HHhCCCHHHeeEEEccCCCCCCCcH
Confidence 0012222211 11111111 122221 122333 222 2346889999999999988776544
Q ss_pred H
Q 012253 261 S 261 (467)
Q Consensus 261 ~ 261 (467)
.
T Consensus 290 ~ 290 (381)
T PRK05952 290 R 290 (381)
T ss_pred H
Confidence 3
No 81
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.85 E-value=3.4e-07 Score=95.61 Aligned_cols=227 Identities=15% Similarity=0.144 Sum_probs=133.0
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhh--CCC---c-CeeE-EeccceEee-cc--------CCC-----CCHHHHHHHHH
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS---K-GKYT-VGLGQDCMA-FC--------SEV-----EDVISMSLTVV 65 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~--g~~---~-~k~~-~Gig~r~~a-v~--------~~~-----Ed~~~ma~~Aa 65 (467)
..|-|.++++..|-- .+.+++.+.. |.+ + .+|. ..+..+.-. +. +.. .....+++.|+
T Consensus 4 ~~VvItG~g~~~p~g-~~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a~ 82 (414)
T PRK08722 4 RRVVVTGMGMLSPVG-NTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAG 82 (414)
T ss_pred CCEEEEeeEEECCCC-CCHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHHHHH
Confidence 579999999999987 4677766552 221 1 1110 000000000 00 000 11346889999
Q ss_pred HHHHHHcCCCcCCcC----EEEEEeccCCC-----------------CC--------C-cHHHHHHHHhcccCCCCeeEE
Q 012253 66 TSLLEKYKIDPTQIG----RLEVGSETVID-----------------KS--------K-SIKTFLMQIFEKYGNTDIEGV 115 (467)
Q Consensus 66 ~~aL~~agi~~~~Id----~Li~~Tes~~~-----------------~~--------p-s~a~~v~~~Lgl~G~~~~~~~ 115 (467)
+++|+++|+++.+.+ .+++||..+.. .. + .++.+|...+|+.| .++
T Consensus 83 ~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~G----p~~ 158 (414)
T PRK08722 83 IQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRG----PNI 158 (414)
T ss_pred HHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCC----Ccc
Confidence 999999999764433 36677653311 00 1 36778888988844 255
Q ss_pred eeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-------cc---------CCC---CC--------Cccccce
Q 012253 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------YA---------EGP---AR--------PTGGAAA 168 (467)
Q Consensus 116 di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-------y~---------~~~---~~--------~t~GdGA 168 (467)
.+..||++++.||..|.++|++|.. +.+||.++|... |. +.+ .+ ...|+||
T Consensus 159 ti~~aCas~~~Al~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~gEGa 236 (414)
T PRK08722 159 AISTACTTGLHNIGHAARMIAYGDA--DAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGA 236 (414)
T ss_pred ccccccHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEeeceE
Confidence 6789999999999999999999977 999999999741 10 000 11 2349999
Q ss_pred eEEEecCCCCc-----eeecccccccc-cCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 012253 169 VAMLIGPDAPI-----AFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSM 242 (467)
Q Consensus 169 vA~Ll~~~~~~-----~~~~~~~~~~~-~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~ 242 (467)
+|+||.+.... .+.-.+.++.. .+...+..|. .+|.- -..++..++ ..+++++
T Consensus 237 aalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~-------~~~~~----~~~a~~~Al----------~~agi~~ 295 (414)
T PRK08722 237 GMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPS-------EDGSG----GALAMEAAM----------RDAGVTG 295 (414)
T ss_pred EEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC-------cchHH----HHHHHHHHH----------HHcCCCH
Confidence 99999975310 00000122211 1222233332 12211 122233222 3347899
Q ss_pred cccceeccCCchHHHHHHH
Q 012253 243 LDVDYFVFHSPYNKLVQKS 261 (467)
Q Consensus 243 ~d~d~~i~H~p~~k~~~k~ 261 (467)
+|||++..|-.++...+..
T Consensus 296 ~did~ie~hgtgt~~~D~~ 314 (414)
T PRK08722 296 EQIGYVNAHGTSTPAGDVA 314 (414)
T ss_pred HHcCEEEccCccCCCCCHH
Confidence 9999999999887655443
No 82
>PLN02287 3-ketoacyl-CoA thiolase
Probab=98.83 E-value=1.8e-08 Score=105.86 Aligned_cols=97 Identities=12% Similarity=0.173 Sum_probs=83.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcH-HHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHH
Q 012253 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSI-KTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 53 ~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~-a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A 131 (467)
.+.+..+|+.+|++++|+++|++++|||.+++|+.++....+.. +..+...+|+ +..+.++++.++|.+|..|+..|
T Consensus 67 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl--~~~~pa~~V~~~CaSG~~Ai~~A 144 (452)
T PLN02287 67 KDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADV 144 (452)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCC--CCCcceEEEeccCchHHHHHHHH
Confidence 36789999999999999999999999999999988765544443 3456667787 44588999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 012253 132 VNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 132 ~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
...|++|.+ +.|||++.|.+
T Consensus 145 a~~I~sG~~--dvvLv~GvE~m 164 (452)
T PLN02287 145 AAAIKAGFY--DIGIGAGVESM 164 (452)
T ss_pred HHHHHcCCC--CeEEEEeEEec
Confidence 999999976 99999999876
No 83
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.82 E-value=2.3e-07 Score=97.18 Aligned_cols=177 Identities=16% Similarity=0.104 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCc-C----EEEEEeccCCC---------------------CCC-----cHHHHHHHHhc
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQI-G----RLEVGSETVID---------------------KSK-----SIKTFLMQIFE 105 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~I-d----~Li~~Tes~~~---------------------~~p-----s~a~~v~~~Lg 105 (467)
...|++.|++++|+++|++++++ + .+++||..+.. ..+ ..+.+|...||
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 35789999999999999987766 3 56677754321 011 24567888888
Q ss_pred ccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-------------c----cCCC---------
Q 012253 106 KYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------------Y----AEGP--------- 159 (467)
Q Consensus 106 l~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-------------y----~~~~--------- 159 (467)
+.| .++-+..+|++++.||..|..+|++|.. +.+||+++|... + ...+
T Consensus 162 l~G----p~~~v~~aCaSg~~Al~~A~~~I~~G~~--d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~ 235 (424)
T PRK06333 162 FKG----PLGAPVTACAAGVQAIGDAARLIRSGEA--DVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDR 235 (424)
T ss_pred CCC----CCccccchhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCC
Confidence 833 2445679999999999999999999977 999999999730 1 1000
Q ss_pred --CCCccccceeEEEecCCCC-----ceeeccccccccc-CcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHH
Q 012253 160 --ARPTGGAAAVAMLIGPDAP-----IAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQK 231 (467)
Q Consensus 160 --~~~t~GdGAvA~Ll~~~~~-----~~~~~~~~~~~~~-~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~ 231 (467)
+..+.|+||+++||.+... ..+...+.|.... +...+..| ..+|.- ..+++..++
T Consensus 236 ~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~-------~~~~~~----~~~a~~~Al------ 298 (424)
T PRK06333 236 DRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAG-------PEDGEG----ARRAMLIAL------ 298 (424)
T ss_pred CCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCC-------CCCcHH----HHHHHHHHH------
Confidence 1134599999999986421 0000012222221 11111111 122221 233333333
Q ss_pred HHhhhcCCCCccccceeccCCchHHHHHH
Q 012253 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQK 260 (467)
Q Consensus 232 ~~~~~~~~~~~~d~d~~i~H~p~~k~~~k 260 (467)
..+++.++|||++..|-.++...+.
T Consensus 299 ----~~Agi~p~dId~i~~hgtgt~~~D~ 323 (424)
T PRK06333 299 ----RQAGIPPEEVQHLNAHATSTPVGDL 323 (424)
T ss_pred ----HHcCCCHHHCCEEeccCCCCccchH
Confidence 2346889999999999988775443
No 84
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.81 E-value=3e-08 Score=103.15 Aligned_cols=109 Identities=11% Similarity=0.119 Sum_probs=87.7
Q ss_pred EEeccceEeeccC----CCCCHHHHHHHHHHHHHHHc-CCCcCCcCEEEEEeccCC-CCCCcHHHHHHHHhcccCCCCee
Q 012253 40 TVGLGQDCMAFCS----EVEDVISMSLTVVTSLLEKY-KIDPTQIGRLEVGSETVI-DKSKSIKTFLMQIFEKYGNTDIE 113 (467)
Q Consensus 40 ~~Gig~r~~av~~----~~Ed~~~ma~~Aa~~aL~~a-gi~~~~Id~Li~~Tes~~-~~~ps~a~~v~~~Lgl~G~~~~~ 113 (467)
..|.++..+.-.. .+.+..+|+.+|++++|+++ |++|++||.+++++..+. ...+..+..+...+|+ +++.
T Consensus 6 IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl---~~~p 82 (406)
T PRK07851 6 IVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGY---DFLP 82 (406)
T ss_pred EEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCC---CCCC
Confidence 3466655433111 24678999999999999996 999999999999864432 2235567789999998 4578
Q ss_pred EEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 114 ~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
++.+.++|++|..|+..|...|++|.+ +.|||++.|..
T Consensus 83 ~~~v~~~caSG~~av~~Aa~~I~sG~~--d~vLv~G~e~~ 120 (406)
T PRK07851 83 GTTVNRYCSSSLQTTRMAFHAIKAGEG--DVFISAGVETV 120 (406)
T ss_pred eeeeeccchhHHHHHHHHHHHHHCCCC--CEEEEeeEEec
Confidence 889999999999999999999999977 99999999986
No 85
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=98.80 E-value=2.5e-08 Score=103.24 Aligned_cols=96 Identities=9% Similarity=0.030 Sum_probs=83.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCC-CCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~-~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~ 132 (467)
+.+..+|+.+|++++|+++|+.+++||.+++|+..+... .+.++.+++..+|+ +..+.++.+.++|.+|..|+..|.
T Consensus 24 ~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl--~~~~p~~~V~~aCaSG~~Al~~A~ 101 (391)
T PRK07661 24 TVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGL--PYTVPAITINRYCSSGLQSIAYGA 101 (391)
T ss_pred CCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCC--CCCcceeehhhhhhHHHHHHHHHH
Confidence 347899999999999999988889999999997765433 36677789999997 335889999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 012253 133 NWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~ 153 (467)
..|++|.. +.+||+++|.+
T Consensus 102 ~~I~sG~~--d~vLv~G~E~m 120 (391)
T PRK07661 102 ERIMLGHS--EAVIAGGAESM 120 (391)
T ss_pred HHHHcCCC--CEEEEEEEeec
Confidence 99999977 99999999976
No 86
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.80 E-value=2.5e-07 Score=97.31 Aligned_cols=177 Identities=16% Similarity=0.177 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcC-----CcCEEEEEeccCCC-----------------CC--------C-cHHHHHHHHhc
Q 012253 57 VISMSLTVVTSLLEKYKIDPT-----QIGRLEVGSETVID-----------------KS--------K-SIKTFLMQIFE 105 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~-----~Id~Li~~Tes~~~-----------------~~--------p-s~a~~v~~~Lg 105 (467)
...|++.|+.++|+++|+++. +...+++||..+.. .. + .++.+|...||
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457899999999999998542 45667788753221 00 1 24567888888
Q ss_pred ccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-----------------ccCC------C---
Q 012253 106 KYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-----------------YAEG------P--- 159 (467)
Q Consensus 106 l~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-----------------y~~~------~--- 159 (467)
+.| .++-+.++|++++.||..|..+|++|.. +.+||.++|... +... +
T Consensus 173 l~G----p~~tv~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~ 246 (437)
T PLN02836 173 FQG----PNHAAVTACATGAHSIGDAFRMIQFGDA--DVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDC 246 (437)
T ss_pred CCC----ceeceeChhHHHHHHHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCccc
Confidence 732 3666789999999999999999999977 899998888631 0100 0
Q ss_pred --CCCccccceeEEEecCCCCc-----eeeccccccccc-CcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHH
Q 012253 160 --ARPTGGAAAVAMLIGPDAPI-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQK 231 (467)
Q Consensus 160 --~~~t~GdGAvA~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~ 231 (467)
+-.+.|+||+|+||++...- .+-..+.++... +...... |..++.. ...++..++
T Consensus 247 ~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~-------p~~~~~~----~~~a~~~Al------ 309 (437)
T PLN02836 247 DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQ-------PHEDGRG----AVLAMTRAL------ 309 (437)
T ss_pred CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcC-------CCcchHH----HHHHHHHHH------
Confidence 12346999999999974210 000001122111 1111111 1122221 122333322
Q ss_pred HHhhhcCCCCccccceeccCCchHHHHHH
Q 012253 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQK 260 (467)
Q Consensus 232 ~~~~~~~~~~~~d~d~~i~H~p~~k~~~k 260 (467)
+.+++.++|||++..|-.+....+.
T Consensus 310 ----~~Agi~~~dId~ve~hgtgt~~~D~ 334 (437)
T PLN02836 310 ----QQSGLHPNQVDYVNAHATSTPLGDA 334 (437)
T ss_pred ----HHcCCCHhHcCEEEccCCcCcCcCH
Confidence 3357889999999999988865544
No 87
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.80 E-value=4.5e-07 Score=94.04 Aligned_cols=136 Identities=19% Similarity=0.214 Sum_probs=86.0
Q ss_pred cHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-cc------------------
Q 012253 95 SIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-VY------------------ 155 (467)
Q Consensus 95 s~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~-~y------------------ 155 (467)
..+.+|+..||+.| .++.+..||++++.||..|..+|++|.. +.|||+++|.. ..
T Consensus 138 ~~a~~ia~~lgl~G----p~~~i~~acas~~~Al~~A~~~I~~G~~--d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~P 211 (392)
T PRK09185 138 SLADFLRAYLGLSG----PAYTISTACSSSAKVFASARRLLEAGLC--DAAIVGGVDSLCRLTLNGFNSLESLSPQPCRP 211 (392)
T ss_pred HHHHHHHHHhCCCC----CcccccChhHHHHHHHHHHHHHHHcCCC--CEEEEeeccccChHHHHHHHhccccCCCccCC
Confidence 47788999999833 4677788999999999999999999977 99999999853 11
Q ss_pred -cCCCCCCccccceeEEEecCCCCceeeccccccccc-CcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHH
Q 012253 156 -AEGPARPTGGAAAVAMLIGPDAPIAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE 233 (467)
Q Consensus 156 -~~~~~~~t~GdGAvA~Ll~~~~~~~~~~~~~~~~~~-~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~ 233 (467)
+......+.||||+++||++.....+. +.+.... +......| ..++.- ..+++.. .+
T Consensus 212 fd~~~~G~~~gEGaa~vVLe~~~~~~~~--I~g~g~~~d~~~~~~~-------~~~~~~----~~~a~~~----Al---- 270 (392)
T PRK09185 212 FSANRDGINIGEAAAFFLLEREDDAAVA--LLGVGESSDAHHMSAP-------HPEGLG----AILAMQQ----AL---- 270 (392)
T ss_pred CcCCCCccceeceEEEEEEEEcCCCcEE--EEEEEEeCCCCCCCCC-------CCCHHH----HHHHHHH----HH----
Confidence 001123567999999999987321111 1111111 11111111 112211 1122222 22
Q ss_pred hhhcCCCCccccceeccCCchHHHHH
Q 012253 234 KLEGRQFSMLDVDYFVFHSPYNKLVQ 259 (467)
Q Consensus 234 ~~~~~~~~~~d~d~~i~H~p~~k~~~ 259 (467)
+.+++.++|||++..|-.+.+..+
T Consensus 271 --~~Agl~~~dId~v~~hgtgt~~~D 294 (392)
T PRK09185 271 --ADAGLAPADIGYINLHGTATPLND 294 (392)
T ss_pred --HHcCCCHHHccEEEeCCCCCcCCC
Confidence 335799999999999998877544
No 88
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.80 E-value=3.2e-07 Score=96.07 Aligned_cols=90 Identities=12% Similarity=0.188 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCCcCE----EEEEeccCCCC--------------------------CCcHHHHHHHHhc
Q 012253 57 VISMSLTVVTSLLEKYKID-PTQIGR----LEVGSETVIDK--------------------------SKSIKTFLMQIFE 105 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~-~~~Id~----Li~~Tes~~~~--------------------------~ps~a~~v~~~Lg 105 (467)
...|++.|++++|+++|++ +++++. +++++..+... .-.++.+|...||
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 5789999999999999998 666553 44555432210 0124556777777
Q ss_pred ccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeec
Q 012253 106 KYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (467)
Q Consensus 106 l~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~ 152 (467)
+.| .++.+..+|++++.||..|..+|++|.. +.+||.++|.
T Consensus 157 l~G----p~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~lvgG~e~ 197 (421)
T PTZ00050 157 LKG----PSGSAVTACATGAHCIGEAFRWIKYGEA--DIMICGGTEA 197 (421)
T ss_pred CCC----cccccccHhHHHHHHHHHHHHHHHcCCC--CEEEECcccc
Confidence 733 3456788999999999999999999977 8999999986
No 89
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.78 E-value=4e-07 Score=94.92 Aligned_cols=163 Identities=18% Similarity=0.183 Sum_probs=105.2
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhh--CCC---c-Cee-----EEec-cc-eEe---eccCC-----CCCHHHHHHHHH
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS---K-GKY-----TVGL-GQ-DCM---AFCSE-----VEDVISMSLTVV 65 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~--g~~---~-~k~-----~~Gi-g~-r~~---av~~~-----~Ed~~~ma~~Aa 65 (467)
..|-|.+||+..|--. +.+++.+.. |.+ + ..| ...+ |+ ..+ .+.++ -.....|++.|+
T Consensus 2 ~~v~ItG~g~vsp~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~Aa 80 (406)
T PRK08439 2 KRVVVTGIGMINSLGL-NKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAA 80 (406)
T ss_pred CCEEEEeeEEECCCcC-CHHHHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhcCCHHHHhhcCHHHHHHHHHH
Confidence 4699999999999874 666655442 321 0 111 0000 00 000 00010 012468999999
Q ss_pred HHHHHHcCCCcCCcC----EEEEEeccCCC-------------------------CCC-cHHHHHHHHhcccCCCCeeEE
Q 012253 66 TSLLEKYKIDPTQIG----RLEVGSETVID-------------------------KSK-SIKTFLMQIFEKYGNTDIEGV 115 (467)
Q Consensus 66 ~~aL~~agi~~~~Id----~Li~~Tes~~~-------------------------~~p-s~a~~v~~~Lgl~G~~~~~~~ 115 (467)
+++|+++|+++++++ .++++|..+.. ..+ ..+.+|...+|+.| .++
T Consensus 81 ~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~G----p~~ 156 (406)
T PRK08439 81 REAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKG----PNL 156 (406)
T ss_pred HHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCCC----Ccc
Confidence 999999999887776 35555532110 011 46778999999843 246
Q ss_pred eeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc--c-----cc---------CCC-----------CCCccccce
Q 012253 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA--V-----YA---------EGP-----------ARPTGGAAA 168 (467)
Q Consensus 116 di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~--~-----y~---------~~~-----------~~~t~GdGA 168 (467)
.+..+|++++.||..|.++|++|.. +.+||+++|.. . |. ..+ +-.+.|+||
T Consensus 157 ~~~~acas~~~Al~~A~~~i~~G~~--d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa 234 (406)
T PRK08439 157 SSVTACAAGTHAIIEAVKTIMLGGA--DKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGA 234 (406)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCCcEEeeCce
Confidence 6779999999999999999999977 99999999963 0 10 000 113459999
Q ss_pred eEEEecCC
Q 012253 169 VAMLIGPD 176 (467)
Q Consensus 169 vA~Ll~~~ 176 (467)
+++||++.
T Consensus 235 ~~lvLe~~ 242 (406)
T PRK08439 235 GALVLEEY 242 (406)
T ss_pred EEEEEccH
Confidence 99999974
No 90
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=98.76 E-value=2.8e-08 Score=103.03 Aligned_cols=94 Identities=10% Similarity=0.117 Sum_probs=78.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCC---cHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSK---SIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFN 130 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~p---s~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~ 130 (467)
+.+..+|+.+|++++|+++|++|++||.+++|+..+....+ +....+...+ ..++.++++.++|.+|..|+..
T Consensus 29 ~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~----~~~~p~~~V~~~CaSg~~ai~~ 104 (394)
T PRK06445 29 NIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARL----PYNIPAMAVDRQCASSLTTVSI 104 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCC----CCCCcchhhhhhhHHHHHHHHH
Confidence 46789999999999999999999999999999988754323 3333333332 2468899999999999999999
Q ss_pred HHHHHHhCCCCCCEEEEEEeecc
Q 012253 131 CVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 131 A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
|...|++|.+ +.+||+++|..
T Consensus 105 A~~~I~sG~~--d~vLv~G~e~m 125 (394)
T PRK06445 105 GAMEIATGMA--DIVIAGGVEHM 125 (394)
T ss_pred HHHHHHcCCC--CEEEEeeeccc
Confidence 9999999977 99999999965
No 91
>PRK08256 lipid-transfer protein; Provisional
Probab=98.76 E-value=4e-08 Score=101.88 Aligned_cols=106 Identities=21% Similarity=0.133 Sum_probs=83.9
Q ss_pred EEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCC
Q 012253 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN 119 (467)
Q Consensus 40 ~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~ 119 (467)
..|.++..+.-.....+..+|++.|++++|+++|+++++||.+++++..+.... ...+...+|+ ..+.++++.+
T Consensus 5 IvG~~~t~~~~~~~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl---~~~~~~~v~~ 78 (391)
T PRK08256 5 VAGVGMTPFEKPGASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGM---TGIPIVNVNN 78 (391)
T ss_pred EEeccccccccCCCCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCC---CCCCCccccc
Confidence 346666654421224678999999999999999999999999999877654321 2245667787 4466788999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 120 ACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 120 aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
+|.+++.||..|..+|++|.. +.+||+++|..
T Consensus 79 ~caSg~~ai~~A~~~I~sG~~--d~vLv~g~e~~ 110 (391)
T PRK08256 79 NCSTGSTALFLARQAVRSGAA--DCALALGFEQM 110 (391)
T ss_pred ccHHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 999999999999999999977 99999998864
No 92
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.75 E-value=6.2e-08 Score=100.61 Aligned_cols=109 Identities=17% Similarity=0.145 Sum_probs=86.7
Q ss_pred eEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC
Q 012253 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (467)
Q Consensus 39 ~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~ 118 (467)
+..|.+...+.- ..+.+..+|+.+|++++|+++|++++|||.+++++.............+.+.+|+ +...++.+.
T Consensus 10 ~IvG~g~tp~~~-~~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl---~~~~~~~v~ 85 (398)
T PRK06157 10 AILGMGCTKFGE-RWDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRL---PNIPVTRVE 85 (398)
T ss_pred EEEEeccccccc-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCC---CCCCEEEEe
Confidence 345666554321 2356789999999999999999999999999998764432222334678899998 347788899
Q ss_pred CcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 119 ~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
++|.+++.|++.|...|++|.. +.+||+++|.+
T Consensus 86 ~~c~sg~~ai~~A~~~I~sG~~--d~vlv~G~e~~ 118 (398)
T PRK06157 86 NFCATGSEAFRGAVYAVASGAY--DIALALGVEKL 118 (398)
T ss_pred cccHHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 9999999999999999999977 99999999975
No 93
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.71 E-value=6.9e-08 Score=101.17 Aligned_cols=97 Identities=20% Similarity=0.241 Sum_probs=83.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHH
Q 012253 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (467)
Q Consensus 53 ~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~ 132 (467)
.+.++.+|+.+|++.+|+++|++|++||.+++|+..+....+.++-.+...+|+ +..+.++.+.++|++|+.|+..|.
T Consensus 25 ~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl--~~~~P~~tV~~aCaSG~~Ai~~Aa 102 (428)
T PRK08963 25 HGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGM--NVHTDAYSVSRACATSFQAVANVA 102 (428)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCC--CCCCcceeehhhhHHHHHHHHHHH
Confidence 356789999999999999999999999999999865433234456567888887 446889999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 012253 133 NWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~ 153 (467)
..|++|.. +.+||++.|.+
T Consensus 103 ~~I~sG~~--dvvLvgG~Esm 121 (428)
T PRK08963 103 ESIMAGTI--DIGIAGGADSS 121 (428)
T ss_pred HHHHCCCC--CEEEEeccccc
Confidence 99999976 99999999976
No 94
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.69 E-value=2e-06 Score=89.67 Aligned_cols=162 Identities=14% Similarity=0.101 Sum_probs=101.3
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhh--CCCc----CeeE--EeccceEeeccC---------C----C-CCHHHHHHHH
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHD--GVSK----GKYT--VGLGQDCMAFCS---------E----V-EDVISMSLTV 64 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~--g~~~----~k~~--~Gig~r~~av~~---------~----~-Ed~~~ma~~A 64 (467)
+.|-|.+||+..|-- .+.+++.+.. |.+. .++. .++..+.-...+ . . .....|++.|
T Consensus 2 ~~VvITG~g~vtp~G-~~~~~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~al~a 80 (405)
T PRK09116 2 RRVVVTGMGGVTALG-EDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVSLMATRA 80 (405)
T ss_pred CCEEEEeeEEECCCC-CCHHHHHHHHHcCCCCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHHHHHHHH
Confidence 469999999999976 4666655542 2210 0000 011111000000 0 0 1235689999
Q ss_pred HHHHHHHcCCCc------CCcCEEEEEeccCCC-----------------C--------CC-cHHHHHHHHhcccCCCCe
Q 012253 65 VTSLLEKYKIDP------TQIGRLEVGSETVID-----------------K--------SK-SIKTFLMQIFEKYGNTDI 112 (467)
Q Consensus 65 a~~aL~~agi~~------~~Id~Li~~Tes~~~-----------------~--------~p-s~a~~v~~~Lgl~G~~~~ 112 (467)
++++|+++|++. +.+ .+++||..+.. . .| .++.+|...+++.|
T Consensus 81 a~~Al~dAGl~~~~~~~~~r~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G---- 155 (405)
T PRK09116 81 SELALEDAGLLGDPILTDGRM-GIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKG---- 155 (405)
T ss_pred HHHHHHHcCCCCccccCCCcE-EEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCC----
Confidence 999999999842 223 45666643210 0 11 25678888998844
Q ss_pred eEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc------c------c---CCC---CC--------Ccccc
Q 012253 113 EGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV------Y------A---EGP---AR--------PTGGA 166 (467)
Q Consensus 113 ~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~------y------~---~~~---~~--------~t~Gd 166 (467)
..+-+..+|++++.||..|.++|++|.. +.+||.++|... + . ..+ .+ ...|+
T Consensus 156 p~~ti~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~G~v~gE 233 (405)
T PRK09116 156 RVIPTSSACTSGSQGIGYAYEAIKYGYQ--TVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIGE 233 (405)
T ss_pred CcccccchhhhHHHHHHHHHHHHHcCCC--CEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCCCEeeec
Confidence 2556788999999999999999999977 899999998631 0 0 000 11 23499
Q ss_pred ceeEEEecCC
Q 012253 167 AAVAMLIGPD 176 (467)
Q Consensus 167 GAvA~Ll~~~ 176 (467)
||+++||++.
T Consensus 234 Ga~~~vLe~~ 243 (405)
T PRK09116 234 GAGTLVLEEL 243 (405)
T ss_pred cEEEEEEccH
Confidence 9999999964
No 95
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.68 E-value=1.3e-07 Score=97.81 Aligned_cols=95 Identities=7% Similarity=0.050 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHH
Q 012253 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNW 134 (467)
Q Consensus 55 Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~ 134 (467)
.+..+|+.+|++++|+++|+++++||.+++++..+.......+..+...+|+ +..+.++.+.++|.+++.|+..|...
T Consensus 24 ~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~v~~~caSg~~av~~Aa~~ 101 (388)
T PRK06366 24 IKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGL--PFGVTKYTVNVVCASGMLAVESAARE 101 (388)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCC--CCCCcceeeechhhHHHHHHHHHHHH
Confidence 6789999999999999999999999999998764322123446678888888 44577888889999999999999999
Q ss_pred HHhCCCCCCEEEEEEeecc
Q 012253 135 VESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 135 l~a~~~~~~~aLVV~sD~~ 153 (467)
|++|.. +.+||++.|.+
T Consensus 102 I~sG~~--d~vla~G~e~m 118 (388)
T PRK06366 102 IMLGER--DLVIAGGMENM 118 (388)
T ss_pred HhcCCC--CEEEEEeeEcc
Confidence 999977 89999888975
No 96
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.68 E-value=7.1e-07 Score=92.81 Aligned_cols=113 Identities=16% Similarity=0.107 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----EEEEEeccCCC----------------C-CC---------cHHHHHHHHhcc
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIG----RLEVGSETVID----------------K-SK---------SIKTFLMQIFEK 106 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id----~Li~~Tes~~~----------------~-~p---------s~a~~v~~~Lgl 106 (467)
...|++.|++++|+++|+++++++ .|++||..+.. . .| ..+.+|...+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 357899999999999999876543 36677654321 0 01 245688888888
Q ss_pred cCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-------c------c--CCC-----------C
Q 012253 107 YGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y------A--EGP-----------A 160 (467)
Q Consensus 107 ~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-------y------~--~~~-----------~ 160 (467)
.| .++-+..+|++++.||..|.++|++| . +.+||.++|... + . ..+ +
T Consensus 151 ~G----p~~ti~~acaS~~~Al~~A~~~i~~G--~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~ 223 (399)
T cd00832 151 RG----PSGVVVAEQAGGLDALAQARRLVRRG--T-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAA 223 (399)
T ss_pred CC----CcccccchhHHHHHHHHHHHHHHHcC--C-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCC
Confidence 43 24556789999999999999999999 6 789999998731 1 0 000 1
Q ss_pred CCccccceeEEEecCC
Q 012253 161 RPTGGAAAVAMLIGPD 176 (467)
Q Consensus 161 ~~t~GdGAvA~Ll~~~ 176 (467)
-.+.|+||+++||++.
T Consensus 224 G~~~gEGa~~lvLe~~ 239 (399)
T cd00832 224 GYVPGEGGAILVLEDA 239 (399)
T ss_pred CEeeeceEEEEEEeeH
Confidence 1345999999999875
No 97
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=1.6e-07 Score=98.43 Aligned_cols=109 Identities=9% Similarity=-0.040 Sum_probs=85.1
Q ss_pred eEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcH-HHHHHHHhcccCCCCeeEEee
Q 012253 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSI-KTFLMQIFEKYGNTDIEGVDS 117 (467)
Q Consensus 39 ~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~-a~~v~~~Lgl~G~~~~~~~di 117 (467)
+..|++...+.-...+.+..+|+++|+++||+++|++++|||.+++++.+........ ...+...+|+ +.+.++.+
T Consensus 19 aIvG~g~Tpfgr~~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl---~~~~~~~v 95 (430)
T PRK06365 19 YMVAAGVTKFDKASPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGL---VPKPSKRI 95 (430)
T ss_pred EEEEeeecCccccCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCC---CCCceEEE
Confidence 3467776654322235677899999999999999999999999888764433222222 3456788888 44778888
Q ss_pred CCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeec
Q 012253 118 TNACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (467)
Q Consensus 118 ~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~ 152 (467)
.++|+++..|+..|...|++|.+ +.|||+++|.
T Consensus 96 ~~~~aSg~~ai~~A~~~I~sG~~--~~vLv~G~e~ 128 (430)
T PRK06365 96 EGGGATGGLAFQAGYEEIASGRM--DCVAVYGFET 128 (430)
T ss_pred eCCcHHHHHHHHHHHHHHHcCCC--CEEEEEEeee
Confidence 99999999999999999999976 9999999885
No 98
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.63 E-value=1.8e-07 Score=97.19 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=82.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCC-CCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~-~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~ 132 (467)
+.++.+|+.+|++++|+++|++|++||.+++|+..+.-. ...++..+...+|+ +..+.++.+.++|++|+.|+..|.
T Consensus 23 ~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--p~~~p~~tV~~~CaSG~~Ai~~A~ 100 (401)
T PRK08131 23 SVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGL--PVTVPGQTVNRLCASGLAAVIDAA 100 (401)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCC--CCCCceeeeechhhhHHHHHHHHH
Confidence 567899999999999999999999999999998743322 34556667778787 457899999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 012253 133 NWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~ 153 (467)
..|++|.. +.+||++.|.+
T Consensus 101 ~~I~sG~~--dvvlagG~Esm 119 (401)
T PRK08131 101 RAITCGEG--DLYLAGGVESM 119 (401)
T ss_pred HHHHCCCC--CEEEEEEecCC
Confidence 99999976 99999999976
No 99
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=98.62 E-value=2.9e-07 Score=95.53 Aligned_cols=96 Identities=9% Similarity=0.047 Sum_probs=80.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~ 133 (467)
+.+..+|+++|++++|+++|+++++||.+++++.......+..+..+...+|+ +.++.++.+.++|.+++.|+..|..
T Consensus 22 ~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl--~~~~p~~~v~~~caSg~~av~~Aa~ 99 (394)
T PLN02644 22 SLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGL--PPSTICTTVNKVCASGMKAVMLAAQ 99 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCC--CCCCceEEEeccchHHHHHHHHHHH
Confidence 46789999999999999999999999999998754322223344567788887 4567788888999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 012253 134 WVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 134 ~l~a~~~~~~~aLVV~sD~~ 153 (467)
.|++|.. +.+||++.|..
T Consensus 100 ~I~sG~~--d~vlv~G~E~~ 117 (394)
T PLN02644 100 SIQLGIN--DVVVAGGMESM 117 (394)
T ss_pred HHHcCCC--CEEEEEeEEec
Confidence 9999977 99999998866
No 100
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.60 E-value=2.4e-07 Score=95.87 Aligned_cols=97 Identities=11% Similarity=0.102 Sum_probs=80.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCC-CcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS-KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~-ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~ 132 (467)
+.++.+|+.+|++.+|++++++|++||.+++|........ ...+-.+...+|+ +.++.++.+.++|++|..|+..|.
T Consensus 23 ~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl--~~~~p~~tV~~~CaSG~~A~~~A~ 100 (387)
T PRK07850 23 GLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGL--PYHVGATTIDCQCGSAQQANHLVA 100 (387)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCC--CCCCceEEEecccccHHHHHHHHH
Confidence 4468999999999999999999999999999975432211 2244455666787 447999999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeeccc
Q 012253 133 NWVESASWDGRYGLVVCTDSAV 154 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~~ 154 (467)
..|++|.. +.+||++.|.+.
T Consensus 101 ~~I~sG~~--dvvla~G~E~mS 120 (387)
T PRK07850 101 GLIAAGAI--DVGIACGVEAMS 120 (387)
T ss_pred HHHHCCCC--CEEEEEeEecCC
Confidence 99999976 999999999883
No 101
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.58 E-value=2.9e-07 Score=95.49 Aligned_cols=96 Identities=11% Similarity=0.130 Sum_probs=84.0
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEEeccCCCC-CCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~-agi~~~~Id~Li~~Tes~~~~-~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A 131 (467)
+.++.+|+..|++.+|++ ++++|++||.+|+|...+... .+.++-.+...+|+ +.++.++.|.++|++|+.|+.+|
T Consensus 23 ~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl--~~~vp~~tV~~~CaSG~~Av~~A 100 (400)
T PRK13359 23 SVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGL--PHGVPGSTINRLCGSGMDAVGVA 100 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEEeccchhHHHHHHHH
Confidence 346799999999999997 599999999999997654322 36678888889898 55799999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 012253 132 VNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 132 ~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
...|++|.. +.+||++.|.+
T Consensus 101 ~~~I~sG~~--divlagGvEsm 120 (400)
T PRK13359 101 ARAIKSGEA--ALMIAGGVESM 120 (400)
T ss_pred HHHHHcCCC--CEEEEeeeecc
Confidence 999999976 99999999987
No 102
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.58 E-value=1.8e-07 Score=96.76 Aligned_cols=97 Identities=10% Similarity=0.140 Sum_probs=83.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~ 133 (467)
+..+.+|+..|++.+|+++|++|++||.+++|...+.......+..+...+|+ +.++.++.+.++|.+|+.|+..|..
T Consensus 24 ~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl--~~~~p~~~V~~~CaSG~~Ai~~A~~ 101 (392)
T PRK06633 24 TTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGI--PKEVPGYTINKVCGSGLKSVALAAN 101 (392)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCC--CCCccchhhcchhHHHHHHHHHHHH
Confidence 56799999999999999999999999999999765433234456667778887 4468999999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeeccc
Q 012253 134 WVESASWDGRYGLVVCTDSAV 154 (467)
Q Consensus 134 ~l~a~~~~~~~aLVV~sD~~~ 154 (467)
.|++|.. +.+||++.|.+.
T Consensus 102 ~I~sG~~--dvvla~G~E~ms 120 (392)
T PRK06633 102 SIMTGDN--EIVIAGGQENMS 120 (392)
T ss_pred HHHcCCC--CEEEEcccccCC
Confidence 9999976 899999999873
No 103
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.57 E-value=2.2e-07 Score=97.27 Aligned_cols=112 Identities=19% Similarity=0.170 Sum_probs=85.9
Q ss_pred eEEeccceEeecc---CCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEE
Q 012253 39 YTVGLGQDCMAFC---SEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV 115 (467)
Q Consensus 39 ~~~Gig~r~~av~---~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~ 115 (467)
|..|.++..+.-. ..+.+..+|+..|++.+|++++++|++||.+++|+..+......++-.+.-..|+ +..+.++
T Consensus 10 ~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl--~~~~p~~ 87 (430)
T TIGR02446 10 AIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGM--NVHTDAY 87 (430)
T ss_pred EEEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCC--CCCCchh
Confidence 3445555544311 1356789999999999999999999999999999765432222233333333576 4478999
Q ss_pred eeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc
Q 012253 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV 154 (467)
Q Consensus 116 di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~ 154 (467)
.+.++|++|+.|+..|...|++|.+ +.+||++.|.+.
T Consensus 88 ~V~~~CaSG~~A~~~a~~~I~sG~~--dvvla~G~E~mS 124 (430)
T TIGR02446 88 SVTRACATSFQSAVNVAESIMAGAI--DIGIAGGADSSS 124 (430)
T ss_pred hhhhhhhHHHHHHHHHHHHHHCCCC--CEEEEeeeEccc
Confidence 9999999999999999999999977 999999999883
No 104
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.57 E-value=2.8e-07 Score=95.72 Aligned_cols=97 Identities=8% Similarity=0.108 Sum_probs=84.0
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEEeccCCCC-CCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~-agi~~~~Id~Li~~Tes~~~~-~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A 131 (467)
+.++.+|+..|++.+|++ ++++|++||.+++|+..+... .+..+-.+...+|+ +.++.++.+.++|++|..|+..|
T Consensus 23 ~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--~~~vP~~tV~~aCaSG~~Ai~~A 100 (401)
T PRK09050 23 SVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGL--PVSVPGTTINRLCGSGMDAVGTA 100 (401)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCC--CCCCceEEEecccccHHHHHHHH
Confidence 567899999999999996 699999999999997654322 35567778899888 56799999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeeccc
Q 012253 132 VNWVESASWDGRYGLVVCTDSAV 154 (467)
Q Consensus 132 ~~~l~a~~~~~~~aLVV~sD~~~ 154 (467)
...|++|.. +.+||++.|.+.
T Consensus 101 ~~~I~sG~~--dvvlagGvEsmS 121 (401)
T PRK09050 101 ARAIKAGEA--ELMIAGGVESMS 121 (401)
T ss_pred HHHHHCCCC--CEEEEecccccc
Confidence 999999976 999999999873
No 105
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.55 E-value=4.7e-07 Score=94.97 Aligned_cols=98 Identities=13% Similarity=0.093 Sum_probs=80.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCC--cCEEEEEeccCCC--CCCcHHHHHHHHhccc----CCCCeeEEeeCCcChHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQ--IGRLEVGSETVID--KSKSIKTFLMQIFEKY----GNTDIEGVDSTNACYGGT 125 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~--Id~Li~~Tes~~~--~~ps~a~~v~~~Lgl~----G~~~~~~~di~~aC~gg~ 125 (467)
+.+..+|+.+|++++|+++|++++| ||.+++|+..... ..+.++..+...+|+. |-..+.++.+.++|.+|+
T Consensus 45 ~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~ 124 (438)
T PTZ00455 45 NKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGG 124 (438)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEECcCHHHH
Confidence 5678999999999999999999999 9999998764322 2344566666555542 225677889999999999
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 126 AALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 126 ~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
.|+..|...|++|.. +.|||++.|.+
T Consensus 125 ~Ai~~A~~~I~sG~~--dvvlv~G~E~m 150 (438)
T PTZ00455 125 LAVQSAWEALLAGTS--DIALVVGVEVQ 150 (438)
T ss_pred HHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 999999999999977 99999999986
No 106
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.55 E-value=2.5e-06 Score=88.78 Aligned_cols=163 Identities=13% Similarity=0.133 Sum_probs=102.6
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhh--CC---Cc-CeeE-EeccceEee---cc-----C-----CCCCHHHHHHHHHH
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHD--GV---SK-GKYT-VGLGQDCMA---FC-----S-----EVEDVISMSLTVVT 66 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~--g~---~~-~k~~-~Gig~r~~a---v~-----~-----~~Ed~~~ma~~Aa~ 66 (467)
..|-|.+||+..|-- .+.+++.+.. |. .+ ..|. .++..+... +. + .-.....|++.|++
T Consensus 2 ~rVvITG~G~vsp~G-~~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~a~~aa~ 80 (406)
T PRK07967 2 RRVVITGLGIVSSIG-NNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDASAYAYLAME 80 (406)
T ss_pred CcEEEEcceEECCCC-CCHHHHHHHHHcCCCceeECCcccccCCCCceEEEcCCChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence 479999999999986 4666655542 22 11 1110 111111100 00 0 01124578999999
Q ss_pred HHHHHcCCCcCCcC----EEEEEeccCCC-----------------C---------CC-cHHHHHHHHhcccCCCCeeEE
Q 012253 67 SLLEKYKIDPTQIG----RLEVGSETVID-----------------K---------SK-SIKTFLMQIFEKYGNTDIEGV 115 (467)
Q Consensus 67 ~aL~~agi~~~~Id----~Li~~Tes~~~-----------------~---------~p-s~a~~v~~~Lgl~G~~~~~~~ 115 (467)
++|+++|+++.+++ .+++||..+.. . .+ ..+.+|...||+.| .++
T Consensus 81 ~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~G----p~~ 156 (406)
T PRK07967 81 QAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKG----VNY 156 (406)
T ss_pred HHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCC----Ccc
Confidence 99999998754332 34555532211 0 11 25678899998843 245
Q ss_pred eeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc------cc----------CCC---CC--------Cccccce
Q 012253 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV------YA----------EGP---AR--------PTGGAAA 168 (467)
Q Consensus 116 di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~------y~----------~~~---~~--------~t~GdGA 168 (467)
-+..+|++++.||..|.++|++|.. +.+||.++|... |. ..+ .+ ...|+||
T Consensus 157 tvs~aCas~~~Ai~~A~~~ir~G~~--d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGa 234 (406)
T PRK07967 157 SISSACATSAHCIGNAVEQIQLGKQ--DIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGG 234 (406)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceeeeceE
Confidence 5789999999999999999999977 899999998631 10 000 01 2349999
Q ss_pred eEEEecCC
Q 012253 169 VAMLIGPD 176 (467)
Q Consensus 169 vA~Ll~~~ 176 (467)
+++||++.
T Consensus 235 a~lvLe~~ 242 (406)
T PRK07967 235 GVVVVEEL 242 (406)
T ss_pred EEEEEeeH
Confidence 99999864
No 107
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.54 E-value=3e-06 Score=90.95 Aligned_cols=226 Identities=17% Similarity=0.203 Sum_probs=131.3
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhh--CC---Cc-Ce-----eEEec-cc-eEee---ccCC----CCC-HHHHHHHHH
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHD--GV---SK-GK-----YTVGL-GQ-DCMA---FCSE----VED-VISMSLTVV 65 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~--g~---~~-~k-----~~~Gi-g~-r~~a---v~~~----~Ed-~~~ma~~Aa 65 (467)
+.|-|.+||+..|-- .+.+++.+.. |. .+ +. |..-+ |. +.+. +.++ .-| ...|++.|+
T Consensus 129 ~rVvITG~G~vtp~G-~~~~~~w~~L~~G~s~i~~~~~f~~~~~~~~~ag~i~~f~~~~~l~~k~~r~md~~~~~al~Aa 207 (540)
T PLN02787 129 RRVVVTGMGVVSPLG-HDPDVFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 207 (540)
T ss_pred CCEEEEeeEEECCCC-CCHHHHHHHHHcCCCcccccCccchhhCCccccccccccChhhcCCHHHHHhCCHHHHHHHHHH
Confidence 579999999999986 4666655542 22 11 11 11000 10 0000 0000 011 346889999
Q ss_pred HHHHHHcCCCcCC---cC----EEEEEeccCCCC----------------CC---------cHHHHHHHHhcccCCCCee
Q 012253 66 TSLLEKYKIDPTQ---IG----RLEVGSETVIDK----------------SK---------SIKTFLMQIFEKYGNTDIE 113 (467)
Q Consensus 66 ~~aL~~agi~~~~---Id----~Li~~Tes~~~~----------------~p---------s~a~~v~~~Lgl~G~~~~~ 113 (467)
+++|+++|++++. ++ .|++||..+... .| ..+.+|...||+.| .
T Consensus 208 ~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~G----p 283 (540)
T PLN02787 208 KKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMG----P 283 (540)
T ss_pred HHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCCCC----C
Confidence 9999999987642 21 467777543210 01 13567888888743 3
Q ss_pred EEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc--c-----c---------cCCC-----------CCCcccc
Q 012253 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA--V-----Y---------AEGP-----------ARPTGGA 166 (467)
Q Consensus 114 ~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~--~-----y---------~~~~-----------~~~t~Gd 166 (467)
.+.+..||++++.||..|.++|++|.. +.+||.++|.. . | .+.+ +-.+.|+
T Consensus 284 ~~tistACASs~~Ai~~A~~~Ir~G~a--D~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~rdGfv~GE 361 (540)
T PLN02787 284 NYSISTACATSNFCILNAANHIIRGEA--DVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGE 361 (540)
T ss_pred ccccccccccHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCCCCccccc
Confidence 566789999999999999999999977 89999999963 0 0 0000 1134699
Q ss_pred ceeEEEecCCCC-----ceeecccccccc-cCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 012253 167 AAVAMLIGPDAP-----IAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQF 240 (467)
Q Consensus 167 GAvA~Ll~~~~~-----~~~~~~~~~~~~-~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~ 240 (467)
||+++||++... -.+...+.|... .+.+....| ..+|.- ...+++.++ .++++
T Consensus 362 GAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p-------~p~g~g----~~~am~~AL----------~~AGl 420 (540)
T PLN02787 362 GAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEP-------HPEGAG----VILCIEKAL----------AQSGV 420 (540)
T ss_pred ceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCC-------CcCHHH----HHHHHHHHH----------HHcCC
Confidence 999999996421 001101122211 122222222 223422 123333322 33579
Q ss_pred CccccceeccCCchHHHHHH
Q 012253 241 SMLDVDYFVFHSPYNKLVQK 260 (467)
Q Consensus 241 ~~~d~d~~i~H~p~~k~~~k 260 (467)
.++||||+..|-..++..+.
T Consensus 421 ~p~dIdyInaHGTGT~~gD~ 440 (540)
T PLN02787 421 SKEDVNYINAHATSTKAGDL 440 (540)
T ss_pred CHHHCcEEEccCccCCCCCH
Confidence 99999999999987765443
No 108
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.52 E-value=6.7e-07 Score=92.82 Aligned_cols=97 Identities=10% Similarity=0.124 Sum_probs=83.5
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEEeccCCCC-CCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~-agi~~~~Id~Li~~Tes~~~~-~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A 131 (467)
+.++.+|+..|++.+|++ ++++|++||.+++|+...... .+..+-.+...+|+ +.++.++.|.++|++|+.|+..|
T Consensus 22 ~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--~~~~p~~~V~~~CaSG~~Ai~~a 99 (400)
T TIGR02430 22 SVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGL--PVSVPGTTVNRLCGSGLDAIGMA 99 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEeechhhhHHHHHHHH
Confidence 567799999999999996 699999999999997653221 25567778999998 44699999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeeccc
Q 012253 132 VNWVESASWDGRYGLVVCTDSAV 154 (467)
Q Consensus 132 ~~~l~a~~~~~~~aLVV~sD~~~ 154 (467)
...|++|.. +.+||++.|.+.
T Consensus 100 ~~~I~sG~~--d~~la~G~E~ms 120 (400)
T TIGR02430 100 ARAIKAGEA--DLLIAGGVESMS 120 (400)
T ss_pred HHHHHCCCC--CEEEEecccccc
Confidence 999999976 999999999883
No 109
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.50 E-value=6.8e-07 Score=92.50 Aligned_cols=96 Identities=14% Similarity=0.172 Sum_probs=77.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCC-CCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~-~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~ 132 (467)
+.++.+|+..|++.+|+++++++++||.+++|+..+... .+..+..+.-.-|+ +.++.++.+.++|++|..|+..|.
T Consensus 23 ~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl--~~~vP~~tV~~~CaSG~~Ai~~A~ 100 (390)
T PRK06504 23 GWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKL--PESVPGTSIDRQCGSSQQALHFAA 100 (390)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEEechhhHHHHHHHHHH
Confidence 567899999999999999999999999999997653221 13333222222255 457889999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 012253 133 NWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~ 153 (467)
..|++|.+ +.+||++.|.+
T Consensus 101 ~~I~sG~~--dvvLagGvEsm 119 (390)
T PRK06504 101 QAVMSGTM--DIVIAAGVESM 119 (390)
T ss_pred HHHHCCCC--CEEEEeeeeec
Confidence 99999977 99999999987
No 110
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.47 E-value=4.1e-06 Score=86.95 Aligned_cols=166 Identities=13% Similarity=0.056 Sum_probs=105.2
Q ss_pred CCCceeEEeEEEEecCCceeehhHHhhhh--CCCcCee--------EEe-ccceEe-e-ccCC-----CCCHHHHHHHHH
Q 012253 4 WHPKNVGILALDIYFPPTCVLQEALEVHD--GVSKGKY--------TVG-LGQDCM-A-FCSE-----VEDVISMSLTVV 65 (467)
Q Consensus 4 ~~~~~vgI~ai~~y~P~~~v~~~el~~~~--g~~~~k~--------~~G-ig~r~~-a-v~~~-----~Ed~~~ma~~Aa 65 (467)
+.++.|-|.+||+..|-- .+.+++.+.. |.+...+ ..+ +++-.. . +... -.....|++.|+
T Consensus 3 ~~~~rVvITGiG~vsp~G-~~~e~~w~aL~~G~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~a~~Aa 81 (398)
T PRK06519 3 MQPNDVVITGIGLVSSLG-EGLDAHWNALSAGRPQPNVDTETFAPYPVHPLPEIDWSQQIPKRGDQRQMETWQRLGTYAA 81 (398)
T ss_pred CCCCCEEEEcceEECCCC-CCHHHHHHHHHcCCCCCCCCcccccCcCcccccccChhhcCCchhhhhccCHHHHHHHHHH
Confidence 347889999999999876 3666655553 3321011 000 111000 0 1110 123567899999
Q ss_pred HHHHHHcCCCcC-----CcCEEEEEeccCCC-----------------------------CCC---------cHHHHHHH
Q 012253 66 TSLLEKYKIDPT-----QIGRLEVGSETVID-----------------------------KSK---------SIKTFLMQ 102 (467)
Q Consensus 66 ~~aL~~agi~~~-----~Id~Li~~Tes~~~-----------------------------~~p---------s~a~~v~~ 102 (467)
+++|+++|+++. +++ +++||..+.. ..| ..+..|..
T Consensus 82 ~~Al~dAGl~~~~~~~~r~G-vivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~ 160 (398)
T PRK06519 82 GLALDDAGIKGNEELLSTMD-MIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAGNISI 160 (398)
T ss_pred HHHHHHcCCCCCCCCccceE-EEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHHHHHH
Confidence 999999998543 333 4555543321 011 25667888
Q ss_pred HhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------cc------CC---C--C----
Q 012253 103 IFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------YA------EG---P--A---- 160 (467)
Q Consensus 103 ~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~-~------y~------~~---~--~---- 160 (467)
.+|+.| .++.+.++|++++.||..|..+|++|.. +.+||.++|.. . |. .. + +
T Consensus 161 ~~gl~G----p~~ti~~acaSg~~Ai~~A~~~I~~G~~--d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~d~~~~ 234 (398)
T PRK06519 161 VHKVTG----SSRTFMGEESAGVSAIEIAFARIASGQS--DHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVWSRGGE 234 (398)
T ss_pred HhCCCC----ccccccCCccHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHHcCccCCCCCCchhccCcc
Confidence 888844 3566789999999999999999999976 89999999863 1 11 00 0 1
Q ss_pred -C--CccccceeEEEecCCC
Q 012253 161 -R--PTGGAAAVAMLIGPDA 177 (467)
Q Consensus 161 -~--~t~GdGAvA~Ll~~~~ 177 (467)
+ ...|.||+++||++..
T Consensus 235 ~r~G~v~GEGAa~lvLE~~~ 254 (398)
T PRK06519 235 DGGGFILGSGGAFLVLESRE 254 (398)
T ss_pred CCCCeeeeceEEEEEEeeHH
Confidence 1 2349999999999753
No 111
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.46 E-value=9.6e-07 Score=91.33 Aligned_cols=104 Identities=8% Similarity=-0.019 Sum_probs=82.6
Q ss_pred eEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC
Q 012253 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (467)
Q Consensus 39 ~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~ 118 (467)
+..|+|+..+.. .++.+..+|+.+|++++|+++|++++|||.+++.+..+.. ....+.+.||+ .......+.
T Consensus 8 aIvG~g~t~~~~-~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~----~~~~~~~~lGl---~~~~~~~v~ 79 (388)
T PRK08142 8 YIVGAYEHPTRK-APDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGL----GPASMVDYLGL---KLRHVDSTE 79 (388)
T ss_pred EEEEEeecccee-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCc----cHHHHHHhCCC---CCeeecccc
Confidence 356888877643 3467789999999999999999999999998753222111 12458899998 345666778
Q ss_pred CcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeec
Q 012253 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (467)
Q Consensus 119 ~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~ 152 (467)
++|.++..++..|...|++|.+ +.||||+.|.
T Consensus 80 ~gg~s~~~a~~~A~~~I~sG~~--d~vLvvg~e~ 111 (388)
T PRK08142 80 TGGSSYLAHVGHAAQAIAAGKC--SVALITLAGR 111 (388)
T ss_pred CCcHHHHHHHHHHHHHHHcCCC--CEEEEEeeee
Confidence 8999999999999999999977 9999999875
No 112
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.46 E-value=1e-06 Score=91.15 Aligned_cols=110 Identities=13% Similarity=0.096 Sum_probs=79.9
Q ss_pred EEeccceEeeccCC---CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccC-CCCCCcHHHHHHHHhcccCCCCeeEE
Q 012253 40 TVGLGQDCMAFCSE---VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETV-IDKSKSIKTFLMQIFEKYGNTDIEGV 115 (467)
Q Consensus 40 ~~Gig~r~~av~~~---~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~-~~~~ps~a~~v~~~Lgl~G~~~~~~~ 115 (467)
..|.++..+.--.. ..+..+|+.+|++++|+++|+++++||.+++++... ....+..+..+.-..|+ ...+.++
T Consensus 6 Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl--~~~~p~~ 83 (382)
T PRK07801 6 IVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGL--PEEVPGV 83 (382)
T ss_pred EEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCC--CCCCcee
Confidence 34666555431111 257899999999999999999999999999985411 11112223322224555 3457788
Q ss_pred eeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 116 di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
.+.++|.+++.|+..|...|++|.. +.+||++.|.+
T Consensus 84 ~v~~acaSg~~Av~~Aa~~I~sG~~--d~vLv~G~e~m 119 (382)
T PRK07801 84 TVDRQCGSSQQAIHFAAQAVMSGTQ--DLVVAGGVQNM 119 (382)
T ss_pred eecchhhhHHHHHHHHHHHHHCCCC--CEEEEcchhhh
Confidence 8899999999999999999999977 99999888854
No 113
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.45 E-value=7.9e-07 Score=92.02 Aligned_cols=96 Identities=15% Similarity=0.123 Sum_probs=81.1
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEEeccCCCC-CCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~-agi~~~~Id~Li~~Tes~~~~-~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A 131 (467)
+.+..+|+..|++.+|++ ++++|++||.+++|+..+... ....+..+...+|+ +..+.++.+.++|.+|..|+..|
T Consensus 24 ~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl--~~~~p~~~V~~~caSG~~Ai~~A 101 (387)
T PRK08947 24 NVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGI--PHSVPAVTVNRLCGSSMQALHDA 101 (387)
T ss_pred CCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCC--CCCCcceeeechhHHHHHHHHHH
Confidence 566899999999999997 699999999999997653322 24455567777777 44688999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 012253 132 VNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 132 ~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
...|++|.. +.+||++.|.+
T Consensus 102 ~~~I~sG~~--d~vlv~G~E~m 121 (387)
T PRK08947 102 ARAIMTGDG--DVFLIGGVEHM 121 (387)
T ss_pred HHHHHCCCC--CEEEEcccccc
Confidence 999999977 99999999976
No 114
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.45 E-value=1.6e-05 Score=83.28 Aligned_cols=161 Identities=13% Similarity=0.100 Sum_probs=98.9
Q ss_pred ceeEEeEEEEecCCceeehhHHhhhh--CC---Cc--C----e--eEEeccceEe--ec---cCC----CCC-HHHHHHH
Q 012253 7 KNVGILALDIYFPPTCVLQEALEVHD--GV---SK--G----K--YTVGLGQDCM--AF---CSE----VED-VISMSLT 63 (467)
Q Consensus 7 ~~vgI~ai~~y~P~~~v~~~el~~~~--g~---~~--~----k--~~~Gig~r~~--av---~~~----~Ed-~~~ma~~ 63 (467)
+.|-|.+|++..|-- .+.+++.+.. |. .+ . . +...++- .. .+ .++ .-| ..-|++.
T Consensus 12 ~~VvItGig~~sp~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~g-~i~~~~d~~~~~~~~~~~d~~~~~~l~ 89 (418)
T PRK07910 12 PNVVVTGIAMTTALA-TDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGG-HLLEEFDHQLTRVELRRMSYLQRMSTV 89 (418)
T ss_pred CCEEEEeeEEECCCC-CCHHHHHHHHHcCCCeeEeCChhhhhccCCCcceEE-EeccCccccCCHHHHhhccHHHHHHHH
Confidence 569999999999875 4677765552 22 10 0 0 0000000 00 00 000 012 3458889
Q ss_pred HHHHHHHHcCC---CcCCcCEEEEEeccCCC-----------------CC--------C-cHHHHHHHHhcccCCCCeeE
Q 012253 64 VVTSLLEKYKI---DPTQIGRLEVGSETVID-----------------KS--------K-SIKTFLMQIFEKYGNTDIEG 114 (467)
Q Consensus 64 Aa~~aL~~agi---~~~~Id~Li~~Tes~~~-----------------~~--------p-s~a~~v~~~Lgl~G~~~~~~ 114 (467)
|++++|+++|+ +++.++. ++||..+.. .. + ..+.+|...+++.| ..
T Consensus 90 aa~~AledAg~~~~~~~r~Gv-~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G----~~ 164 (418)
T PRK07910 90 LGRRVWENAGSPEVDTNRLMV-SIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKA----GV 164 (418)
T ss_pred HHHHHHHHcCCCCCCcccEEE-EEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCC----Cc
Confidence 99999999986 4455554 455543211 00 1 24556777777633 24
Q ss_pred EeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc--c-----c------cC-------CC--------CCCcccc
Q 012253 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA--V-----Y------AE-------GP--------ARPTGGA 166 (467)
Q Consensus 115 ~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~--~-----y------~~-------~~--------~~~t~Gd 166 (467)
+.+..||++++.||..|.++|++|.. +.+||.++|.. . | .. .. +-...|+
T Consensus 165 ~ti~taCaS~~~Al~~A~~~I~~G~~--d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~v~gE 242 (418)
T PRK07910 165 ITPVSACASGSEAIAQAWRQIVLGEA--DIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGE 242 (418)
T ss_pred ccccchhHHHHHHHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCEeeec
Confidence 55679999999999999999999976 89999999873 1 1 00 00 0123599
Q ss_pred ceeEEEecCC
Q 012253 167 AAVAMLIGPD 176 (467)
Q Consensus 167 GAvA~Ll~~~ 176 (467)
||+++||.+.
T Consensus 243 Gaa~vvLe~~ 252 (418)
T PRK07910 243 GGALMVIETE 252 (418)
T ss_pred eEEEEEEeeH
Confidence 9999999875
No 115
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.44 E-value=1.1e-05 Score=82.08 Aligned_cols=113 Identities=13% Similarity=0.099 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHcCC--CcCCcCEEEEEeccCCC----------------C-CC---------cHHHHHHHHhcccC
Q 012253 57 VISMSLTVVTSLLEKYKI--DPTQIGRLEVGSETVID----------------K-SK---------SIKTFLMQIFEKYG 108 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi--~~~~Id~Li~~Tes~~~----------------~-~p---------s~a~~v~~~Lgl~G 108 (467)
...|+..|++++|+++|+ ++++++.+ +||..+.. . .| .++.+|...+|+.|
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~-~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATI-IGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEE-EecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC
Confidence 457899999999999996 56666555 44433221 0 11 25677888888744
Q ss_pred CCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-------c----------cCCC---CC-------
Q 012253 109 NTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y----------AEGP---AR------- 161 (467)
Q Consensus 109 ~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-------y----------~~~~---~~------- 161 (467)
.++-+..+|++++.||..|.++|+.|.. +.+||.++|... | ...+ .+
T Consensus 83 ----p~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~ 156 (342)
T PRK14691 83 ----PIGAPVTACAAGVQAIGDAVRMIRNNEA--DVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD 156 (342)
T ss_pred ----CccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC
Confidence 2456789999999999999999999977 899999998731 1 1001 01
Q ss_pred -CccccceeEEEecCC
Q 012253 162 -PTGGAAAVAMLIGPD 176 (467)
Q Consensus 162 -~t~GdGAvA~Ll~~~ 176 (467)
...||||+++||...
T Consensus 157 G~v~gEGAa~lvLes~ 172 (342)
T PRK14691 157 GFVMGEGAGLLIIEEL 172 (342)
T ss_pred CccccceEEEEEEeeH
Confidence 345999999999864
No 116
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.44 E-value=1.6e-06 Score=90.70 Aligned_cols=96 Identities=13% Similarity=0.135 Sum_probs=77.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~ 133 (467)
+.+..+|+.+|++.+|+++++++++||.+++|+..+....+..+..+.-..|+ .....++.+.++|.+|+.|+..|..
T Consensus 28 ~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl--~~~~p~~~V~~~CaSG~~ai~~A~~ 105 (427)
T PRK09268 28 DASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSAL--SPYTPAYDLQQACGTGLEAAILVAN 105 (427)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCC--CCCCceeeeechhhHHHHHHHHHHH
Confidence 46789999999999999999999999999999765422122234443333344 3557888999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 012253 134 WVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 134 ~l~a~~~~~~~aLVV~sD~~ 153 (467)
.|++|.. +.+||++.|.+
T Consensus 106 ~I~sG~~--d~vlvgG~E~m 123 (427)
T PRK09268 106 KIALGQI--DSGIAGGVDTT 123 (427)
T ss_pred HHHCCCC--CEEEEeeEEcc
Confidence 9999976 89999999976
No 117
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.36 E-value=1.2e-06 Score=90.62 Aligned_cols=96 Identities=15% Similarity=0.141 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEEeccCCCC-CCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~-agi~~~~Id~Li~~Tes~~~~-~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A 131 (467)
+.++.+|+..|++.+|++ ++++|++||.+++|+...... ...++..+.-..|+ +..+.++.+.++|++|..|+..|
T Consensus 22 ~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~--~~~~p~~tV~~~CaSG~~Ai~~A 99 (385)
T TIGR02445 22 NTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQI--PHTSAAVTVNRLCGSSMQALHDA 99 (385)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCC--CCCcchhhhhhhhHHHHHHHHHH
Confidence 567889999999999997 599999999999997643221 22344444445565 45588899999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 012253 132 VNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 132 ~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
...|++|.. +.+||++.|.+
T Consensus 100 a~~I~sG~~--d~vlagG~E~m 119 (385)
T TIGR02445 100 ARAIMTGDA--DVCLVGGVEHM 119 (385)
T ss_pred HHHHHCCCC--CEEEEeeehhc
Confidence 999999976 89999999976
No 118
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.34 E-value=3.9e-06 Score=89.49 Aligned_cols=108 Identities=11% Similarity=0.058 Sum_probs=84.5
Q ss_pred EEeccceEeeccCCCC--CHHHHHHHHHHHHHHHcCCC--cCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEE
Q 012253 40 TVGLGQDCMAFCSEVE--DVISMSLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV 115 (467)
Q Consensus 40 ~~Gig~r~~av~~~~E--d~~~ma~~Aa~~aL~~agi~--~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~ 115 (467)
.+|+|+..+.-..++. +..+|+.+|++++|+++|++ +++||.|++++.... ........|.+.||+ .+ ....
T Consensus 8 IVGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~-~~~~~~~~la~~lGl--~p-~~~~ 83 (498)
T PRK08257 8 IVGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSW-RYRDPPGLLAERLGA--DP-ARTV 83 (498)
T ss_pred EEEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccc-cccCHHHHHHHHcCC--CC-ccee
Confidence 4699987654212232 78999999999999999999 999999998755322 122345789999998 33 3345
Q ss_pred eeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 116 di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
....+|.++..+|..|...|++|.+ +.|||+++|..
T Consensus 84 ~~~~GG~s~~~~v~~Aa~~IasG~a--dvVLv~G~E~~ 119 (498)
T PRK08257 84 YSPVGGNSPQRLVNEAALRIAAGEA--DVALVAGAEAQ 119 (498)
T ss_pred EecCCCHHHHHHHHHHHHHHHCCCC--CEEEEeeeeec
Confidence 5667899999999999999999977 99999999985
No 119
>PRK07855 lipid-transfer protein; Provisional
Probab=98.33 E-value=3.6e-06 Score=87.09 Aligned_cols=102 Identities=9% Similarity=-0.003 Sum_probs=80.1
Q ss_pred eEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC
Q 012253 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (467)
Q Consensus 39 ~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~ 118 (467)
+..|+|+..+.- .++.+..+|+.+|++++|+++|++++|||.+++.+.. ..+. ..|.+.||+ .+......+.
T Consensus 7 ~IvG~g~t~~~r-~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~--~~l~~~lGl--~~~~~~~~v~ 78 (386)
T PRK07855 7 AIVGIGATEFSK-NSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD---TNPE--IAVARALGI--GELKFFSRIH 78 (386)
T ss_pred EEEEeeeccccc-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc---cccH--HHHHHHCCC--CCCcceeeec
Confidence 346888766532 2456789999999999999999999999999875432 1222 568899998 3323445778
Q ss_pred CcChHHHHHHHHHHHHHHhCCCCCCEEEEEEe
Q 012253 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCT 150 (467)
Q Consensus 119 ~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~s 150 (467)
++|.++..+|..|...|++|.+ +.|||+++
T Consensus 79 ~gg~sg~~~~~~A~~~I~sG~~--d~vLv~g~ 108 (386)
T PRK07855 79 YGGGAACATVQQAAMAVATGVA--DVVVCYRA 108 (386)
T ss_pred CCcHHHHHHHHHHHHHHHCCCC--CEEEEEee
Confidence 8999999999999999999977 99999977
No 120
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.27 E-value=6.4e-06 Score=85.01 Aligned_cols=105 Identities=12% Similarity=0.073 Sum_probs=76.9
Q ss_pred EEeccceEeeccCCCCCHHHHHHHHHHHHHHHcC-CCc-CCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEee
Q 012253 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYK-IDP-TQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS 117 (467)
Q Consensus 40 ~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~ag-i~~-~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di 117 (467)
..|+|+..+.-..++.+..+|+.+|++++|+++| +++ +|||.+++++........-....+.+.||+.+. ..+-+
T Consensus 8 IvG~g~t~~~~~~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~---~~~~v 84 (385)
T PRK06066 8 IVGIGWYGFRPTTPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMR---PTMTV 84 (385)
T ss_pred EEEeeecCCcCCCCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCC---CeEEE
Confidence 4688877754223468899999999999999999 997 799999886421111111122356688887322 22223
Q ss_pred CCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeec
Q 012253 118 TNACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (467)
Q Consensus 118 ~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~ 152 (467)
|.++..++..|...|++|.+ +.|||++.+.
T Consensus 85 ---~~sg~~a~~~A~~aV~sG~~--d~vLv~g~~~ 114 (385)
T PRK06066 85 ---AGDGLQGLAHAVMHINSGLA--NVVVVEAHSK 114 (385)
T ss_pred ---eCcHHHHHHHHHHHHHcCCC--CEEEEEEEee
Confidence 88999999999999999987 9999999874
No 121
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.24 E-value=6e-06 Score=80.06 Aligned_cols=113 Identities=23% Similarity=0.221 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCc-----CEEEEEeccCCC---------------CC--------C-cHHHHHHHHhccc
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQI-----GRLEVGSETVID---------------KS--------K-SIKTFLMQIFEKY 107 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~I-----d~Li~~Tes~~~---------------~~--------p-s~a~~v~~~Lgl~ 107 (467)
..-|++.|+.+||+++|+++.++ =.|++||..+.+ .. + ..+..|...||+.
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~ 166 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR 166 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC
Confidence 56899999999999999998543 235567766521 01 1 2567899999984
Q ss_pred CCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------------ccCC-C--------CCCccc
Q 012253 108 GNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------------YAEG-P--------ARPTGG 165 (467)
Q Consensus 108 G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~-~------------y~~~-~--------~~~t~G 165 (467)
| .++-+..+|++++.||..|.++|++|.. +.+||.++|.. . .... + +-...|
T Consensus 167 G----~~~tv~~acaSgl~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~g 240 (254)
T PF00109_consen 167 G----PSYTVSTACASGLAALEAAYRAIRSGEA--DVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLG 240 (254)
T ss_dssp S----SEEEEE-GGGHHHHHHHHHHHHHHTTSS--SEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB
T ss_pred C----ccccccccccccccccchhccccccccc--cccccccccccccccccccccccccccccccccccCCCCCCEEEE
Confidence 3 2556789999999999999999999977 99999999943 0 1111 1 113569
Q ss_pred cceeEEEecC
Q 012253 166 AAAVAMLIGP 175 (467)
Q Consensus 166 dGAvA~Ll~~ 175 (467)
+||+++||.+
T Consensus 241 EGa~~~vLe~ 250 (254)
T PF00109_consen 241 EGAGALVLER 250 (254)
T ss_dssp -EEEEEEEEE
T ss_pred CceEEEEEEE
Confidence 9999999975
No 122
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.16 E-value=0.00033 Score=68.55 Aligned_cols=178 Identities=17% Similarity=0.095 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHH
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVE 136 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~ 136 (467)
-..|-.+|++.+|+++++.++|||.++-|---..- -.+++.++.|++ | -+-+-.||+.+..+|.+|.-+|.
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~---i~s~f~ar~l~i---P---f~GlygACST~~e~l~laa~~vd 121 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI---ISSSFAARDLGI---P---FLGLYGACSTMMESLALAAMLVD 121 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC---CHHHHHHHHHT--------EEEB--CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh---HHHHHHHHhcCC---C---ccchhhHHHHHHHHHHHHHHHHh
Confidence 36788899999999999999999999987543332 457899999886 3 66778999999999999999999
Q ss_pred hCCCCCCEEEEEEeecc-------cccCCC--CC-Ccc---ccceeEEEecCCCC-ceeecccccccccCcccccccCCC
Q 012253 137 SASWDGRYGLVVCTDSA-------VYAEGP--AR-PTG---GAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLA 202 (467)
Q Consensus 137 a~~~~~~~aLVV~sD~~-------~y~~~~--~~-~t~---GdGAvA~Ll~~~~~-~~~~~~~~~~~~~~~~df~~p~~~ 202 (467)
+|.+ +++|+.+|-=. ||.... -+ +|. =-||.|+||++.+. ..+ ...-.-.+-|+-.-+.
T Consensus 122 gg~a--~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~~p~I----t~~T~GkVvD~G~~D~- 194 (329)
T PF07451_consen 122 GGFA--DYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGSGPRI----THATIGKVVDMGIKDP- 194 (329)
T ss_dssp TTS---SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS--SEEE----EEEE----B-SS---T-
T ss_pred CCCc--ceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCCCcEE----EEEEEEEEEEcCCCCc-
Confidence 9977 89998876432 444321 12 111 45677889988753 222 1111122333321110
Q ss_pred CCCceecCcchHHHHHHHHH-HHHHHHHHHHHhhhcCCCCccccceeccCCchHHHHHHHHHhhh
Q 012253 203 SEYPVVDGKLSQTCYLMALD-SCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLF 266 (467)
Q Consensus 203 ~~~~~vdG~~s~~~y~~a~~-~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~ 266 (467)
.. --.++. .+++.+.+.+ .+.+.+++|.|.++.-- -.+...+++..|+
T Consensus 195 ---------~n---MGaAMAPAA~dTI~~h~---~D~g~~p~dYDlIvTGD-Lg~vG~~il~~Ll 243 (329)
T PF07451_consen 195 ---------NN---MGAAMAPAAADTIEQHF---KDTGRSPDDYDLIVTGD-LGKVGRKILRDLL 243 (329)
T ss_dssp ---------T----HHHHHHHHHHHHHHHHH---HHCT--GGG-SEEEESS--HHHHHHHHHHHH
T ss_pred ---------cc---chhhHhHHHHHHHHHHH---HHhCCChhhcCeEEecc-hHHHHHHHHHHHH
Confidence 00 112332 2333344443 45678899999988643 3455566666664
No 123
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=98.15 E-value=1.3e-05 Score=83.09 Aligned_cols=96 Identities=13% Similarity=0.100 Sum_probs=84.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCC-CCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~-~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~ 132 (467)
+-++.+|++.+.+.+|++++++|++||-||+|...+... ...++-...-..|+ +..+.++.++..|.+|+.|+.+|.
T Consensus 26 ~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~agl--p~~vp~~tvnr~C~Sgl~ai~~aa 103 (417)
T PRK06025 26 HLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGY--DIKASGVTLDRFCGGGITSVNLAA 103 (417)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCC--CCCCCeeeeccccchHHHHHHHHH
Confidence 567999999999999999999999999999998765433 35677777777787 788999999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 012253 133 NWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~ 153 (467)
..|++|.. +.+|+.+.|.+
T Consensus 104 ~~I~~G~~--~~~laGG~Esm 122 (417)
T PRK06025 104 AQIMSGME--DLVIAGGTEMM 122 (417)
T ss_pred HHHHcCCC--CEEEEeeeecc
Confidence 99999965 89999999988
No 124
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=97.99 E-value=3.1e-05 Score=79.33 Aligned_cols=91 Identities=13% Similarity=0.173 Sum_probs=76.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~ 133 (467)
+..+.+|+..|++.+++ |++ ++||.+++|...+.. ...+..+...+|+ +..+.++.+.++|.+|+.|+..|..
T Consensus 22 ~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~--~~~~r~~~~~~Gl--~~~~p~~tV~~~CaSG~~Ai~~a~~ 94 (361)
T PRK06690 22 DYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGPG--GNVARLSALEAGL--GLHIPGVTIDRQCGAGLEAIRTACH 94 (361)
T ss_pred CCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCc--chHHHHHHHHcCC--CCCCCceehhhhhhHHHHHHHHHHH
Confidence 35689999999999865 786 899999999775542 3344457778787 4478999999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 012253 134 WVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 134 ~l~a~~~~~~~aLVV~sD~~ 153 (467)
+|++|.. +.+||++.|.+
T Consensus 95 ~I~sG~~--d~~l~gG~E~m 112 (361)
T PRK06690 95 FIQGGAG--KCYIAGGVEST 112 (361)
T ss_pred HHHCCCC--CEEEEeccccc
Confidence 9999976 89999999987
No 125
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=97.98 E-value=0.00028 Score=87.55 Aligned_cols=137 Identities=15% Similarity=0.121 Sum_probs=85.2
Q ss_pred HHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc----c---ccC-------C---
Q 012253 96 IKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA----V---YAE-------G--- 158 (467)
Q Consensus 96 ~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~----~---y~~-------~--- 158 (467)
++.+|...|++.| .++-+..||++++.||..|+++|++|.. +.+||.++|.. . |.. +
T Consensus 185 ~A~RIS~~f~L~G----ps~tVdtACsSSL~Al~~A~~~L~~G~~--D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~cr 258 (2582)
T TIGR02813 185 ISGRIANRFDLGG----MNCVVDAACAGSLAAIRMALSELLEGRS--EMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQ 258 (2582)
T ss_pred HHHHHHHHhCCCC----CcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecceeeCCHHHHHHHHhccCcCCCCCcc
Confidence 5778899999843 2566789999999999999999999976 89999888763 1 111 1
Q ss_pred --C---CCCccccceeEEEecCCCC-c----eeecccccccccCcc---cccccCCCCCCceecCcchHHHHHHHHHHHH
Q 012253 159 --P---ARPTGGAAAVAMLIGPDAP-I----AFESKLRGSHMSHAY---DFYKPNLASEYPVVDGKLSQTCYLMALDSCY 225 (467)
Q Consensus 159 --~---~~~t~GdGAvA~Ll~~~~~-~----~~~~~~~~~~~~~~~---df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~ 225 (467)
+ +-...|.|++++||.+-.. . .+..-+.|+...+.. ..+.| ..+|+ .+++..++
T Consensus 259 pFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP-------~~~gq------~~~i~~Al 325 (2582)
T TIGR02813 259 PFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAP-------RPEGQ------AKALKRAY 325 (2582)
T ss_pred CCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCC-------CHHHH------HHHHHHHH
Confidence 0 1234599999999987421 0 011112222222111 11222 22231 22333322
Q ss_pred HHHHHHHHhhhcCCCCccccceeccCCchHHHHHHH
Q 012253 226 KYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKS 261 (467)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~ 261 (467)
..+|+.++||+|+-.|-..++..+.+
T Consensus 326 ----------~~Agi~p~~I~yIeaHGTGT~~gD~~ 351 (2582)
T TIGR02813 326 ----------DDAGFAPHTCGLIEAHGTGTAAGDVA 351 (2582)
T ss_pred ----------HHcCCCHHHCCEEEecCCCCCCCCHH
Confidence 34579999999999999887765543
No 126
>PRK07937 lipid-transfer protein; Provisional
Probab=97.97 E-value=4.8e-05 Score=77.71 Aligned_cols=107 Identities=14% Similarity=0.071 Sum_probs=71.2
Q ss_pred eEEeccceEeeccCCCCCH-HHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEee
Q 012253 39 YTVGLGQDCMAFCSEVEDV-ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS 117 (467)
Q Consensus 39 ~~~Gig~r~~av~~~~Ed~-~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di 117 (467)
+..|+|+..+...++..+. .+|+.+|++++|+++|++++|||.++.++.-...........+...+|+ .+.....-+
T Consensus 5 aIvG~g~t~~~~~~~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~--~~~~~~~~v 82 (352)
T PRK07937 5 AVVGFAQAPHVRRTDGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGA--VPPINESHV 82 (352)
T ss_pred EEEEeeccccccCCCCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccC--CCCCceEEe
Confidence 3468888876432223344 8999999999999999999999988654321111111112334455665 232222222
Q ss_pred CCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeec
Q 012253 118 TNACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (467)
Q Consensus 118 ~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~ 152 (467)
. .+|..||..|...|++|.. +.|||++.+.
T Consensus 83 ~---~~g~~a~~~A~~aI~sG~~--d~VLv~g~~k 112 (352)
T PRK07937 83 E---MDAAWALYEAWVKLLTGEV--DTALVYGFGK 112 (352)
T ss_pred c---CcHHHHHHHHHHHHhcCCC--CEEEEEEecc
Confidence 2 3577899999999999987 9999999875
No 127
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=97.79 E-value=5.2e-05 Score=72.16 Aligned_cols=109 Identities=19% Similarity=0.151 Sum_probs=84.4
Q ss_pred CeeEEeccceEeeccC--CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeE
Q 012253 37 GKYTVGLGQDCMAFCS--EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114 (467)
Q Consensus 37 ~k~~~Gig~r~~av~~--~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~ 114 (467)
.-|..|+|..++--+. ++-|-.+|+.+|..++|+++++..++|+.-++|-..++-.. .-.-.-.+|+ ..++.
T Consensus 7 rvyvvgvgmtkf~kpg~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstc---gqraiyevgm---tgipi 80 (408)
T KOG1406|consen 7 RVYVVGVGMTKFEKPGRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTC---GQRAIYEVGM---TGIPI 80 (408)
T ss_pred eEEEEecceeeecCCCcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCcc---chHHHHhccc---cCcce
Confidence 4466788888754332 34577899999999999999999999887776654444221 1122236666 77889
Q ss_pred EeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 115 ~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
|.++|+|+.|-.||.+|...|++|.. ..||..+-|.+
T Consensus 81 ~nvnnncatgssalflakqiiesgn~--dcvlalgfekm 117 (408)
T KOG1406|consen 81 YNVNNNCATGSSALFLAKQIIESGNS--DCVLALGFEKM 117 (408)
T ss_pred eeccCccccCchHHHHHHHHHhcCCc--ceEEeechhhh
Confidence 99999999999999999999999976 89999998887
No 128
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.70 E-value=0.00048 Score=71.51 Aligned_cols=180 Identities=17% Similarity=0.225 Sum_probs=111.7
Q ss_pred CHHHHHHHHHHHHHHHcCCC-cCCcC---EEEEEeccCCCC--------------------------CC-cHHHHHHHHh
Q 012253 56 DVISMSLTVVTSLLEKYKID-PTQIG---RLEVGSETVIDK--------------------------SK-SIKTFLMQIF 104 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~agi~-~~~Id---~Li~~Tes~~~~--------------------------~p-s~a~~v~~~L 104 (467)
....+++.|+.+||+++|++ ...++ .+++||..+... .+ ..+..|+..+
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 46789999999999999997 33343 233444332110 01 2466788888
Q ss_pred cccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-------cc---------CCC---CC----
Q 012253 105 EKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------YA---------EGP---AR---- 161 (467)
Q Consensus 105 gl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-------y~---------~~~---~~---- 161 (467)
|+.|. .+-+..||+++..|+..|.++|+.|.. +.+|+.++|-.. |. +.+ .+
T Consensus 150 g~~G~----~~~~~tACatg~~AIg~A~~~I~~G~a--d~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~ 223 (412)
T COG0304 150 GLKGP----NYTPVTACATGAHAIGDAVRLIRLGKA--DVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDK 223 (412)
T ss_pred CCCCC----cCChhhhHHhHHHHHHHHHHHHHcCCC--CEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCC
Confidence 87543 445678999999999999999999976 899999997620 10 011 12
Q ss_pred ----CccccceeEEEecCCCC-c----eeeccccccccc-CcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHH
Q 012253 162 ----PTGGAAAVAMLIGPDAP-I----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQK 231 (467)
Q Consensus 162 ----~t~GdGAvA~Ll~~~~~-~----~~~~~~~~~~~~-~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~ 231 (467)
...|.||+++||+.-.. . .+.-.+.|..+. +.++.-.|. | +|.-- .. +++..+
T Consensus 224 ~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~-----p--~g~Ga----~~----am~~AL-- 286 (412)
T COG0304 224 NRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPA-----P--DGEGA----IR----AMRAAL-- 286 (412)
T ss_pred CCCCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCC-----C--CCchH----HH----HHHHHH--
Confidence 24599999999987541 0 111112232222 334444443 2 33221 12 222222
Q ss_pred HHhhhcCCCCccccceeccCCchHHHHHHHH
Q 012253 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQKSF 262 (467)
Q Consensus 232 ~~~~~~~~~~~~d~d~~i~H~p~~k~~~k~~ 262 (467)
..++++++||||+..|--.++.-++..
T Consensus 287 ----~~Agl~~~~idYinaHgTsT~~nD~~E 313 (412)
T COG0304 287 ----ADAGLTPEDIDYINAHGTSTPANDKAE 313 (412)
T ss_pred ----HHcCCCHhHCCEEeCCCccCCCccHHH
Confidence 345799999999999988776665543
No 129
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.20 E-value=0.0013 Score=68.23 Aligned_cols=94 Identities=14% Similarity=0.145 Sum_probs=74.3
Q ss_pred CHHHHHHHHHHHHHHHc--CCCcCCcCEEEEEeccCCC-CCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHH
Q 012253 56 DVISMSLTVVTSLLEKY--KIDPTQIGRLEVGSETVID-KSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~a--gi~~~~Id~Li~~Tes~~~-~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~ 132 (467)
...++.....+..+++. ++++.+||-+++|+..+.. ....++..+....|+ +.++.++.+..+|.+|+.|+..|.
T Consensus 26 ~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl--~~~~p~~~V~~~c~SG~~Av~~A~ 103 (392)
T COG0183 26 AAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGL--PGSVPAVTVNRACASGLAAVRLAA 103 (392)
T ss_pred CHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCC--CCCCCceEEeccchhHHHHHHHHH
Confidence 34455555555555433 5777778888998766553 456788899999998 446899999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 012253 133 NWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~ 153 (467)
..|++|.. +.+|+++.|.+
T Consensus 104 ~~I~sG~~--dvvlagG~E~m 122 (392)
T COG0183 104 QAIASGEA--DVVLAGGVEKM 122 (392)
T ss_pred HHHHCCCC--CEEEEEeeeec
Confidence 99999966 99999999988
No 130
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.82 E-value=0.017 Score=67.30 Aligned_cols=173 Identities=14% Similarity=0.138 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHcCCCcCCcC----EEEEEeccCCCCCCc-------------------HHHHHHHHhcccCCCCeeEEe
Q 012253 60 MSLTVVTSLLEKYKIDPTQIG----RLEVGSETVIDKSKS-------------------IKTFLMQIFEKYGNTDIEGVD 116 (467)
Q Consensus 60 ma~~Aa~~aL~~agi~~~~Id----~Li~~Tes~~~~~ps-------------------~a~~v~~~Lgl~G~~~~~~~d 116 (467)
|..+.+.++|+++|++|+.+. .|+.|..+.+|.... +++.|...|++.| .++.
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~G----Ps~~ 169 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSG----PSVT 169 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCC----CCcc
Confidence 889999999999999999888 566676666554322 6778999999855 2567
Q ss_pred eCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-------cccCC-----CC----------CCccccceeEEEec
Q 012253 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-------VYAEG-----PA----------RPTGGAAAVAMLIG 174 (467)
Q Consensus 117 i~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~-------~y~~~-----~~----------~~t~GdGAvA~Ll~ 174 (467)
|..+|++.+.|+++|+..|++|.. ..||+-+..+. .|... .+ -...|.|+++++|.
T Consensus 170 vdtaCSSsLvAvhlA~~sL~~Ge~--d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLK 247 (1061)
T COG3321 170 VDTACSSSLVAVHLACQSLRLGEC--DLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLK 247 (1061)
T ss_pred ccchhhHHHHHHHHHHHHHHcCCC--CEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEE
Confidence 789999999999999999999965 77777766654 11111 11 12458999999998
Q ss_pred CCCC-c----eeecccccccccCc---ccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccc
Q 012253 175 PDAP-I----AFESKLRGSHMSHA---YDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVD 246 (467)
Q Consensus 175 ~~~~-~----~~~~~~~~~~~~~~---~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d 246 (467)
+-.. . .+..-+.|+-..+. ..+..|+ .. ...+.+.+++ +.+++.+++|+
T Consensus 248 rl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~-------~~------aQ~~v~~~al----------~~a~i~p~tv~ 304 (1061)
T COG3321 248 RLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPN-------LE------AQADVIREAL----------ADAGIDPATVQ 304 (1061)
T ss_pred EhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCC-------HH------HHHHHHHHHH----------HhcCCCcccCc
Confidence 7431 0 00001122221110 1222222 11 1222222222 44579999999
Q ss_pred eeccCCchHHHHHHH
Q 012253 247 YFVFHSPYNKLVQKS 261 (467)
Q Consensus 247 ~~i~H~p~~k~~~k~ 261 (467)
|+=-|...+.+.+-+
T Consensus 305 yvEaHgTGT~lGDpi 319 (1061)
T COG3321 305 YVEAHGTGTPLGDPI 319 (1061)
T ss_pred EEEecCCCCCCcCHH
Confidence 999999887765543
No 131
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=96.13 E-value=0.067 Score=50.86 Aligned_cols=116 Identities=16% Similarity=0.090 Sum_probs=80.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCC---------------CCC-----cHHHHHHHHhcccCCCCeeEE
Q 012253 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVID---------------KSK-----SIKTFLMQIFEKYGNTDIEGV 115 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~---------------~~p-----s~a~~v~~~Lgl~G~~~~~~~ 115 (467)
..+-|++.++..++.+. .++|.+||+|..|+- .+| |+-..+...+.+.-.......
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~~t 108 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGPNT 108 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCceE
Confidence 58899999999998653 468899999977641 123 222233334443111334455
Q ss_pred eeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc---cccCCC-CCCccccceeEEEecCCCC
Q 012253 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA---VYAEGP-ARPTGGAAAVAMLIGPDAP 178 (467)
Q Consensus 116 di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~---~y~~~~-~~~t~GdGAvA~Ll~~~~~ 178 (467)
-+..+=.++..||.-|..++..| . +.||||+.|-. .|.... .+.....-|+|++|++...
T Consensus 109 al~a~~~sf~~aLleA~~~l~~~-~--~~VLlv~~De~~p~~y~~~~~~~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 109 ALAAGEDSFEAALLEAAAQLAEG-A--EPVLLVCYDEPLPEPYQEFRPERDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEecCcchHHHHHHHHHHHHHcC-C--CCEEEEEeCCCCChhhhhcccccCCCcCEEEEEEecCCCC
Confidence 56677789999999999999988 4 89999999987 454442 2344567789999998754
No 132
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=96.10 E-value=0.0076 Score=57.55 Aligned_cols=96 Identities=11% Similarity=0.124 Sum_probs=76.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcc-cC-CCCeeEEeeCCcChHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK-YG-NTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl-~G-~~~~~~~di~~aC~gg~~AL~~A 131 (467)
+-+..+|.+.|++.+|+.+++.++.+|.+|+|..- .+.+-.-||.+..|| .| +.+..++.++-=|.+|..++.++
T Consensus 25 g~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~---aSSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNg 101 (396)
T KOG1391|consen 25 GLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVL---ASSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVNG 101 (396)
T ss_pred CcchhhHHHHHHHHHHhhcCCChhhcceEEEeeee---eccCCceEeeeccccccCCcCccCceeehhhhcccHHHHHhh
Confidence 45678999999999999999999999999987532 122345688888887 34 45778999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeeccc
Q 012253 132 VNWVESASWDGRYGLVVCTDSAV 154 (467)
Q Consensus 132 ~~~l~a~~~~~~~aLVV~sD~~~ 154 (467)
+.-|.-+.. +-+|--+.|.+.
T Consensus 102 aQ~I~vgea--~ivL~GGtEnMS 122 (396)
T KOG1391|consen 102 AQEICVGEA--EIVLCGGTENMS 122 (396)
T ss_pred HHHhhcCcc--eEEEecCccccc
Confidence 999998855 656655566653
No 133
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.81 E-value=0.03 Score=56.05 Aligned_cols=228 Identities=18% Similarity=0.230 Sum_probs=131.9
Q ss_pred CceeEEeEEEEecCCceeehhHHhhhh----CCCc---CeeE----Eeccce-Eee----ccCCC----CCHHHHHHHHH
Q 012253 6 PKNVGILALDIYFPPTCVLQEALEVHD----GVSK---GKYT----VGLGQD-CMA----FCSEV----EDVISMSLTVV 65 (467)
Q Consensus 6 ~~~vgI~ai~~y~P~~~v~~~el~~~~----g~~~---~k~~----~Gig~r-~~a----v~~~~----Ed~~~ma~~Aa 65 (467)
...|-|.++|...|--.=...-|.... |+.. ..|. .-.|+- ++. |...+ -+...||+.|+
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~aa 102 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTAA 102 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccccccccccchhhhhhhhHHHHHHHHHH
Confidence 367999999999987654444444332 2211 0110 000100 011 00111 13678999999
Q ss_pred HHHHHHcCCCcC---CcC----EEEEEeccCC---------------------CCCCc-----HHHHHHHHhcccCCCCe
Q 012253 66 TSLLEKYKIDPT---QIG----RLEVGSETVI---------------------DKSKS-----IKTFLMQIFEKYGNTDI 112 (467)
Q Consensus 66 ~~aL~~agi~~~---~Id----~Li~~Tes~~---------------------~~~ps-----~a~~v~~~Lgl~G~~~~ 112 (467)
.++|+++++.+. +.| .+.+||.-+. ++.|- .+.+|.-++|+-|+.+
T Consensus 103 ~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~Gpnh- 181 (440)
T KOG1394|consen 103 EEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRGPNH- 181 (440)
T ss_pred HHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcCCch-
Confidence 999999987665 222 3345554331 11221 3568888888855333
Q ss_pred eEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-------c---------cCCC---CCC--------ccc
Q 012253 113 EGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y---------AEGP---ARP--------TGG 165 (467)
Q Consensus 113 ~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-------y---------~~~~---~~~--------t~G 165 (467)
.++.||+.+..++-.|.++|+.|.+ +..|.=++|.+. | .+.+ .|| ..|
T Consensus 182 ---svSTACATg~h~igda~n~Ir~Gda--DvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVmG 256 (440)
T KOG1394|consen 182 ---SVSTACATGNHCIGDAFNFIRLGDA--DVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVMG 256 (440)
T ss_pred ---hhHhhhhhccchHHHHHHHHHhCcc--ceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCceeec
Confidence 4578999999999999999999954 666666677651 0 1111 122 359
Q ss_pred cceeEEEecCC-------CCceeecccccc-cccCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhc
Q 012253 166 AAAVAMLIGPD-------APIAFESKLRGS-HMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEG 237 (467)
Q Consensus 166 dGAvA~Ll~~~-------~~~~~~~~~~~~-~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~ 237 (467)
.||+.+|++.= +++.-+ +.|. .+.|.+....|. .||.-. ..+++.+. ..
T Consensus 257 EGagvlvlEelEHA~~RgA~I~AE--~lGygls~Da~HiT~P~-------~dG~Ga----~~am~raL----------~~ 313 (440)
T KOG1394|consen 257 EGAGVLVLEELEHAKKRGAPIYAE--VLGYGLSSDAYHITSPD-------PDGAGA----VLAMERAL----------KD 313 (440)
T ss_pred cceeEEehHhHHHHHHcCCceeHH--hhcCcccccccccCCCC-------CCcchH----HHHHHHHH----------HH
Confidence 99999988752 232111 2222 223444444553 355432 22333222 34
Q ss_pred CCCCccccceeccCCchHHHHHHHH
Q 012253 238 RQFSMLDVDYFVFHSPYNKLVQKSF 262 (467)
Q Consensus 238 ~~~~~~d~d~~i~H~p~~k~~~k~~ 262 (467)
+++.++||||+--|.-.+.+.+.+.
T Consensus 314 Agl~pe~i~YvNAHATST~~GD~aE 338 (440)
T KOG1394|consen 314 AGLSPEDIDYVNAHATSTPLGDAAE 338 (440)
T ss_pred cCCChhhcCeeecccccCcCchHHH
Confidence 5899999999999998887776553
No 134
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.60 E-value=0.035 Score=54.78 Aligned_cols=96 Identities=8% Similarity=0.087 Sum_probs=73.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~ 133 (467)
.-.+.+|+.-|.+.+|+++++++++++-+|+|..-.-..--..+-...---|| +..+.+..++--|++|+-|+.+|..
T Consensus 27 sl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGl--p~sv~~tTvNkvCaSgmKAv~laaQ 104 (396)
T KOG1390|consen 27 SLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGL--PYSVPATTVNKVCASGMKAVILAAQ 104 (396)
T ss_pred cCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCC--CcceeeEeehhhhhhhHHHHHHHHH
Confidence 35688999999999999999999999999998755433222223332222234 5578888888999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 012253 134 WVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 134 ~l~a~~~~~~~aLVV~sD~~ 153 (467)
-|..|.. ..++..+.|.+
T Consensus 105 sI~~G~~--divVaGGmEsM 122 (396)
T KOG1390|consen 105 SIQTGHA--DIVVAGGMESM 122 (396)
T ss_pred HHhcCCc--cEEEecccchh
Confidence 9999954 67777777776
No 135
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=95.36 E-value=0.044 Score=57.19 Aligned_cols=84 Identities=13% Similarity=0.170 Sum_probs=52.3
Q ss_pred hcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhh
Q 012253 236 EGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYD 315 (467)
Q Consensus 236 ~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~ 315 (467)
+.++++++|||++-+|++|..+.....+.+ |++.++... +
T Consensus 326 ~~AGl~~~DID~~ei~eaFa~~~l~~~~~l------------------------g~~~~~vN~---------~------- 365 (417)
T PRK06025 326 AKAGLTKDDIDLWEINEAFAVVAEKFIRDL------------------------DLDRDKVNV---------N------- 365 (417)
T ss_pred HHcCCCHHHCcEEEEchHHHHHHHHHHHHc------------------------CCChhhccc---------c-------
Confidence 345799999999999999998877777666 444332110 0
Q ss_pred hhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccc
Q 012253 316 LKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLT 366 (467)
Q Consensus 316 ~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~ 366 (467)
--.+.+..-+|+++...+...+..+.++ + .+.| .+.++ .|.|..
T Consensus 366 ---GG~ia~GHp~GaTGa~~v~~ll~qL~~~-g-~~~G-l~~~c-~~GG~g 409 (417)
T PRK06025 366 ---GGAIALGHPIGATGSILIGTVLDELERR-G-LKRG-LVTMC-AAGGMA 409 (417)
T ss_pred ---CCHHhcCCchhHHHHHHHHHHHHHHHHh-C-CCeE-EEEEE-eeccce
Confidence 0111234577888888888888887665 3 3445 33333 333443
No 136
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=94.96 E-value=0.016 Score=56.14 Aligned_cols=89 Identities=16% Similarity=0.123 Sum_probs=70.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHH
Q 012253 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWV 135 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l 135 (467)
-+.+|+.+|...+|++..++.+.||.||+||.-.......++..-+-.-|. +..+.+-.+.-+|-+.-.|+.....+|
T Consensus 65 mphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agf--sdktpahtvtmacissn~amttgmgli 142 (465)
T KOG1392|consen 65 MPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGF--SDKTPAHTVTMACISSNVAMTTGMGLI 142 (465)
T ss_pred chhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCC--CCCCccceeeeehhccchhhhccceeE
Confidence 368999999999999999999999999999976665444455444444455 466778888899999999999999999
Q ss_pred HhCCCCCCEEEEEE
Q 012253 136 ESASWDGRYGLVVC 149 (467)
Q Consensus 136 ~a~~~~~~~aLVV~ 149 (467)
++|.+ .++|-+
T Consensus 143 atg~~---dvivag 153 (465)
T KOG1392|consen 143 ATGNA---DVIVAG 153 (465)
T ss_pred eeCCc---CEEEEc
Confidence 99965 455543
No 137
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=94.18 E-value=0.56 Score=48.69 Aligned_cols=126 Identities=16% Similarity=0.153 Sum_probs=69.4
Q ss_pred eeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHH
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLM 101 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~ 101 (467)
.|..++.++..+.+|--...|.+... ..+ .....-...|++++|+++|++|+|||.+.+- + ..+...-...
T Consensus 252 vl~see~A~~l~~~p~~~i~g~~~~~---~~~-~~~~~~~~~a~~~al~~agl~~~did~~ei~----d-~F~~~~l~~~ 322 (387)
T PRK07850 252 LWMDEDRARALGLRPRARIVAQALVG---AEP-YYHLDGPVQATAKVLEKAGMKIGDIDLVEIN----E-AFASVVLSWA 322 (387)
T ss_pred EEecHHHHHHcCCCCcEEEEEEEEec---cCc-hhhcchHHHHHHHHHHHcCCCHHHcCeeeec----c-cchHHHHHHH
Confidence 35566777777765533323544221 111 1223445689999999999999999999983 2 2233333444
Q ss_pred HHhcccCCCCeeEEeeCC---------cChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecccccCCCCCCccccceeEEE
Q 012253 102 QIFEKYGNTDIEGVDSTN---------ACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAML 172 (467)
Q Consensus 102 ~~Lgl~G~~~~~~~di~~---------aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~~~~~~~t~GdGAvA~L 172 (467)
+.||+ .. .-+.+.. +|. |+..+..+...|+.. ++++.|+..+- .|..+.|||
T Consensus 323 e~lg~--~~--~pvN~~GG~la~Ghp~gat-G~~~v~e~~~qL~~~--~~~~g~~~~c~------------~gg~g~a~~ 383 (387)
T PRK07850 323 QVHEP--DM--DKVNVNGGAIALGHPVGST-GARLITTALHELERT--DKSTALITMCA------------GGALSTGTI 383 (387)
T ss_pred HHcCC--CC--CCcCCCCchhhcCCCcchh-HHHHHHHHHHHHHhc--CCCeEEEEEcc------------ccCceeEEE
Confidence 67665 11 1222222 333 333344444445544 45777765432 455667777
Q ss_pred ecC
Q 012253 173 IGP 175 (467)
Q Consensus 173 l~~ 175 (467)
|+.
T Consensus 384 ~e~ 386 (387)
T PRK07850 384 IER 386 (387)
T ss_pred EEe
Confidence 764
No 138
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=93.47 E-value=0.7 Score=48.18 Aligned_cols=127 Identities=15% Similarity=0.160 Sum_probs=69.5
Q ss_pred eeehhHHhhhhCCCc-CeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHH
Q 012253 22 CVLQEALEVHDGVSK-GKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (467)
Q Consensus 22 ~v~~~el~~~~g~~~-~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v 100 (467)
.|..++.++.+|..+ .++ .|.+... . ++.... .-...|++++|+++|+.|+|||.+.+ . |......-..
T Consensus 263 vL~s~e~A~~~g~~~~a~I-~g~~~~~--~-~p~~~~-~~~~~A~~~al~~AGl~~~DID~iei----~-dafa~~~l~~ 332 (400)
T PRK13359 263 LLASEAAARRHGLKPRARV-LGIATAG--V-EPRVMG-IGPAPATQKLLARLGMTLDQFDVIEL----N-EAFASQGLAV 332 (400)
T ss_pred EEecHHHHHHCCCCccEEE-EEEEEec--C-CCCccc-hhHHHHHHHHHHHhCCCHHHcCcCcc----C-cHhHHHHHHH
Confidence 355566666667655 344 3555442 1 222222 23368999999999999999999983 2 2233344455
Q ss_pred HHHhcccCCCCeeEEeeCCc---------ChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecccccCCCCCCccccceeEE
Q 012253 101 MQIFEKYGNTDIEGVDSTNA---------CYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAM 171 (467)
Q Consensus 101 ~~~Lgl~G~~~~~~~di~~a---------C~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~~~~~~~t~GdGAvA~ 171 (467)
.+.||+. .....+..+.+ ++|....+. +...|+.. ++++.|+..+- .|..+.||
T Consensus 333 ~e~lg~~--~~~~pvN~~GG~la~GHp~gasG~~~v~e-~~~qL~~~--~~~~g~~~~c~------------~gG~g~a~ 395 (400)
T PRK13359 333 LRELGLA--DDDARVNPNGGAIALGHPLGASGARLVTT-ALYQLERT--GGRFALCTMCI------------GVGQGIAI 395 (400)
T ss_pred HHHcCCC--CCCCCEECCCchhhcCCchhHHHHHHHHH-HHHHHhhc--CCCeEEEEEcc------------cCCceeEE
Confidence 6778762 11123333333 333333333 33334433 45777765443 45556777
Q ss_pred EecC
Q 012253 172 LIGP 175 (467)
Q Consensus 172 Ll~~ 175 (467)
||++
T Consensus 396 ~ie~ 399 (400)
T PRK13359 396 AIER 399 (400)
T ss_pred EEEe
Confidence 7764
No 139
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=93.46 E-value=0.14 Score=41.16 Aligned_cols=73 Identities=18% Similarity=0.100 Sum_probs=42.9
Q ss_pred HHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC---C-cChHHHHHHHHHHHHHHhCC-CCCC
Q 012253 69 LEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST---N-ACYGGTAALFNCVNWVESAS-WDGR 143 (467)
Q Consensus 69 L~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~---~-aC~gg~~AL~~A~~~l~a~~-~~~~ 143 (467)
|+++|++++|||.+++.. .++.....+.+.+|+ +++....++. | +|+.-..+|.. .++.+. .||+
T Consensus 1 L~~~g~~~~did~~i~hq-----~~~~~~~~~~~~lgi--~~~~~~~~~~~~Gn~~sa~~~~~L~~---~~~~g~~~~Gd 70 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQ-----ASKKILDSIAKRLGI--PPERFPDNLAEYGNTGSASIPINLAD---ALEEGRIKPGD 70 (90)
T ss_dssp HHHTT--GGGESEEEE-S-----SSHHHHHHHHHHHTS---GGGBE-THHHH-B-GGGHHHHHHHH---HHHTTSSCTTE
T ss_pred CccccCCHHHCCEEEeCC-----CCHHHHHHHHHHcCC--cHHHHHHHHhccCcchhhhHHHHHHH---HHHcCCCCCCC
Confidence 789999999999999854 234455568889998 4432222332 2 44444444444 444432 2678
Q ss_pred EEEEEEee
Q 012253 144 YGLVVCTD 151 (467)
Q Consensus 144 ~aLVV~sD 151 (467)
++|+++.-
T Consensus 71 ~vl~~~~G 78 (90)
T PF08541_consen 71 RVLLVGFG 78 (90)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99988753
No 140
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=93.05 E-value=0.65 Score=48.43 Aligned_cols=75 Identities=9% Similarity=0.087 Sum_probs=46.4
Q ss_pred eeehhHHhhhhCCCc-CeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHH
Q 012253 22 CVLQEALEVHDGVSK-GKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (467)
Q Consensus 22 ~v~~~el~~~~g~~~-~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v 100 (467)
.|..++.++.+|..+ .++ .|.+.... .+..... -...|++++|+++|++|+|||.+.+. |..+...-..
T Consensus 263 vl~s~e~A~~~g~~~~~~I-~g~~~~~~---~~~~~~~-~~~~a~~~al~~Agl~~~DID~~ei~-----D~f~~~~l~~ 332 (400)
T TIGR02430 263 LLASEEAVQRHGLTPRARI-LAAATAGV---EPRIMGI-GPVPATQKLLARAGLSIDQFDVIELN-----EAFAAQALAV 332 (400)
T ss_pred EEecHHHHHHCCCCccEEE-EEEEEecC---CCccccc-hHHHHHHHHHHHhCCCHHHCCCcccC-----cHHHHHHHHH
Confidence 455666666667544 344 35554431 2222222 23588999999999999999999831 2233444556
Q ss_pred HHHhcc
Q 012253 101 MQIFEK 106 (467)
Q Consensus 101 ~~~Lgl 106 (467)
.+.||+
T Consensus 333 ~e~lG~ 338 (400)
T TIGR02430 333 LRELGL 338 (400)
T ss_pred HHHcCC
Confidence 678887
No 141
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=92.82 E-value=0.66 Score=48.42 Aligned_cols=76 Identities=9% Similarity=-0.009 Sum_probs=47.1
Q ss_pred eeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHH
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLM 101 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~ 101 (467)
.|..++.++..+..|-.+..|.+.... .+.... .-...|++++|+++|++|+|||.+.+. |......-...
T Consensus 265 vl~se~~A~~~~~~p~~~i~g~~~~~~---~~~~~~-~~~~~a~~~al~~Agl~~~Did~~ei~-----d~f~~~~l~~~ 335 (404)
T PRK06205 265 LVTTEDKAEELGLRPLARLVSWAVAGV---EPSRMG-IGPVPATEKALARAGLTLDDIDLIELN-----EAFAAQVLAVL 335 (404)
T ss_pred EEecHHHHHHCCCCceEEEEEEEEecc---CCcccc-ccHHHHHHHHHHHcCCCHHHCCEeeec-----cHHHHHHHHHH
Confidence 456667777777666444446664431 111111 233689999999999999999999952 22223344456
Q ss_pred HHhcc
Q 012253 102 QIFEK 106 (467)
Q Consensus 102 ~~Lgl 106 (467)
+.||+
T Consensus 336 e~lg~ 340 (404)
T PRK06205 336 KEWGF 340 (404)
T ss_pred HHhCc
Confidence 67776
No 142
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=92.66 E-value=0.86 Score=47.21 Aligned_cols=96 Identities=16% Similarity=0.242 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccC-CCCeeEEee--CC-cChHHHHHHHHHHHHH
Q 012253 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTDIEGVDS--TN-ACYGGTAALFNCVNWV 135 (467)
Q Consensus 60 ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G-~~~~~~~di--~~-aC~gg~~AL~~A~~~l 135 (467)
-...|++++++++|++|+|||.+... +..........+.||+.+ +-++.+--+ .+ ..++|+..+..+...|
T Consensus 286 ~~~~a~~~a~~~Agi~~~did~~e~~-----d~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL 360 (386)
T cd00751 286 GPVPAIPKALKRAGLTLDDIDLIEIN-----EAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHEL 360 (386)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEee-----chhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHH
Confidence 34689999999999999999999863 222223344456777521 111111111 11 1112333333444445
Q ss_pred HhCCCCCCEEEEEEeecccccCCCCCCccccceeEEEec
Q 012253 136 ESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIG 174 (467)
Q Consensus 136 ~a~~~~~~~aLVV~sD~~~y~~~~~~~t~GdGAvA~Ll~ 174 (467)
+.. .++++|+-.+- .|..+.+|||+
T Consensus 361 ~g~--~~~~gl~~~~~------------~gg~g~~~~ie 385 (386)
T cd00751 361 KRR--GGRYGLATMCI------------GGGQGAAMVIE 385 (386)
T ss_pred Hhc--CCCEEEEEEcc------------cccceEEEEEE
Confidence 433 44777776543 34555677765
No 143
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=92.54 E-value=0.86 Score=52.43 Aligned_cols=178 Identities=17% Similarity=0.235 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEEE---eccCCC--CCCc------HHHHHHHHhcccCCCCeeEEee----
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGR----LEVG---SETVID--KSKS------IKTFLMQIFEKYGNTDIEGVDS---- 117 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~----Li~~---Tes~~~--~~ps------~a~~v~~~Lgl~G~~~~~~~di---- 117 (467)
-.-|-.+|..+++-++||+|.++.. +.++ +||... ..|. +...+-..|- |+=...||+
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfa---NRiSytFDfqGPS 163 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFA---NRISYTFDFQGPS 163 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhh---cceeEEEeccCCc
Confidence 4789999999999999999987652 2221 223211 1111 1111222221 222335554
Q ss_pred ---CCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-------c---c----CCC----CC----CccccceeEEE
Q 012253 118 ---TNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y---A----EGP----AR----PTGGAAAVAML 172 (467)
Q Consensus 118 ---~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~-------y---~----~~~----~~----~t~GdGAvA~L 172 (467)
..+|.+.+.||+.|.+-+++|+. ..|||-+..... | . +++ ++ .--.||.+|+|
T Consensus 164 ~s~DtacsSsl~al~~a~~~~r~gqc--d~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avl 241 (2376)
T KOG1202|consen 164 FSVDTACSSSLMALQNAFQDIRSGQC--DAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVL 241 (2376)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhccCC--chhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEE
Confidence 45999999999999999999977 788888877641 1 1 111 01 11278999999
Q ss_pred ecCCCCceeecccccc--cccCcccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccceecc
Q 012253 173 IGPDAPIAFESKLRGS--HMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVF 250 (467)
Q Consensus 173 l~~~~~~~~~~~~~~~--~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~ 250 (467)
|.+...- .++.++ +...-.|-++-- |-.|| +|+.. .+.+++.| .++|+.++++-|+=-
T Consensus 242 lqrk~~A---rRvYAtilnartNTDGfKEq-GvTfP--~G~~Q----~qLi~e~Y----------se~Gl~P~sv~YvEA 301 (2376)
T KOG1202|consen 242 LQRKSLA---RRVYATILNARTNTDGFKEQ-GVTFP--SGDMQ----EQLIRETY----------SEAGLNPESVVYVEA 301 (2376)
T ss_pred EehhHHH---HHHHHHhhccccCCCchhhc-CccCC--CcHHH----HHHHHHHH----------HhcCCCcccEEEEEe
Confidence 9886421 011111 111113334432 44455 45432 12233333 345899999999999
Q ss_pred CCchHHHHH
Q 012253 251 HSPYNKLVQ 259 (467)
Q Consensus 251 H~p~~k~~~ 259 (467)
|--.+|..+
T Consensus 302 HGtGTkVGD 310 (2376)
T KOG1202|consen 302 HGTGTKVGD 310 (2376)
T ss_pred ccCCCCCCC
Confidence 988877543
No 144
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=92.50 E-value=0.29 Score=48.32 Aligned_cols=95 Identities=17% Similarity=0.284 Sum_probs=76.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccC-CCCeeEEeeCCcChHHHHHHHHHH
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTDIEGVDSTNACYGGTAALFNCV 132 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G-~~~~~~~di~~aC~gg~~AL~~A~ 132 (467)
+..+-+|...+.+.++++.+++|+.|+-|++||.-.+... .+.+.++..+- | +..+...-++--|.+|+.|+...+
T Consensus 58 dt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~a--g~P~tvpv~tvNRqCsSGLqaVadiA 134 (435)
T KOG1389|consen 58 DTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYA--GFPETVPVRTVNRQCSSGLQAVADIA 134 (435)
T ss_pred cCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-hHHHHHHHHHc--CCCcccchhhhhhhhhhHHHHHHHHH
Confidence 3456688889999999999999999999999998776533 66777777662 3 344555566679999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 012253 133 NWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~ 153 (467)
.-|++|.+ .-.|-.+.|.+
T Consensus 135 ~~Ir~G~y--dIGla~GvESM 153 (435)
T KOG1389|consen 135 AKIRAGFY--DIGLAAGVESM 153 (435)
T ss_pred HHHhcCce--eeecccchhhh
Confidence 99999987 67777777776
No 145
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=92.38 E-value=0.97 Score=47.17 Aligned_cols=129 Identities=15% Similarity=0.122 Sum_probs=71.3
Q ss_pred eeehhHHhhhhCCCc-CeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHH
Q 012253 22 CVLQEALEVHDGVSK-GKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (467)
Q Consensus 22 ~v~~~el~~~~g~~~-~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v 100 (467)
.|..++.++.+|..+ .++ .|.+... . .+.... .-...|++++|+++|++++|||.+.+. +......-..
T Consensus 267 vl~s~e~A~~~g~~p~a~I-~g~~~~~--~-~~~~~~-~~~~~a~~~al~~AGl~~~DID~~ei~-----daFa~~~l~~ 336 (402)
T PRK08242 267 LIGSEEAGKALGLKPRARI-VATATIG--S-DPTIML-TGPVPATRKALAKAGLTVDDIDLFELN-----EAFASVVLRF 336 (402)
T ss_pred EEecHHHHHHcCCCCcEEE-EEEEEec--C-Cchhhc-ccHHHHHHHHHHHcCCCHHHCCEEEec-----chhhHHHHHH
Confidence 466778888888755 444 3544332 1 122111 112569999999999999999999962 3333444556
Q ss_pred HHHhcccCC-CCeeE--EeeC--CcChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecccccCCCCCCccccceeEEEecC
Q 012253 101 MQIFEKYGN-TDIEG--VDST--NACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGP 175 (467)
Q Consensus 101 ~~~Lgl~G~-~~~~~--~di~--~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~~~~~~~t~GdGAvA~Ll~~ 175 (467)
.+.||+... -++.+ .-++ .+++|....+.++..+ +.. ++++.|+-.+- .|..++||||++
T Consensus 337 ~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L-~~~--~~~~g~~~~c~------------ggG~g~a~~~e~ 401 (402)
T PRK08242 337 MQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDEL-ERR--GKRTALITLCV------------GGGMGIATIIER 401 (402)
T ss_pred HHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHH-Hhc--CCCeEEEEEcc------------cCCceeEEEEEe
Confidence 788886210 01111 1111 1444444444444443 333 34677665432 566668888764
No 146
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=92.13 E-value=0.87 Score=47.28 Aligned_cols=115 Identities=11% Similarity=0.068 Sum_probs=67.4
Q ss_pred eeehhHHhhhhCCCcC-eeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHH
Q 012253 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~-k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v 100 (467)
.|..+|.++..+..|- ++ .|.++... + .++.......|++++++++|++|+|||.+.+- + ......-.-
T Consensus 252 vl~See~A~~l~~~pv~~I-~g~~~~~~---~-~~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~----d-aFa~~~l~~ 321 (388)
T PRK06366 252 VMASEKAINEYGLKPIARI-TGYESASL---D-PLDFVEAPIPATRKLLEKQNKSIDYYDLVEHN----E-AFSIASIIV 321 (388)
T ss_pred EEecHHHHHHcCCCcCEEE-EEEEEEec---C-HHHhcccHHHHHHHHHHHcCCCHHHcceeecc----c-hhHHHHHHH
Confidence 4566677776676665 54 35555431 1 12333335789999999999999999999873 2 233445566
Q ss_pred HHHhcccCCC-Cee--EEeeCC--cChHHHHHHHHHHHHHHhCCCCCCEEEEEE
Q 012253 101 MQIFEKYGNT-DIE--GVDSTN--ACYGGTAALFNCVNWVESASWDGRYGLVVC 149 (467)
Q Consensus 101 ~~~Lgl~G~~-~~~--~~di~~--aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~ 149 (467)
.+.||+-|.+ |.. .+-.++ +|.|....+.++..+-.. .+++.|+-.
T Consensus 322 le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~---~~~~g~~~~ 372 (388)
T PRK06366 322 RDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTR---HMKTGLATL 372 (388)
T ss_pred HHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhc---CCCeEEEEE
Confidence 6777762210 111 122233 666666666666655443 346766553
No 147
>PRK09051 beta-ketothiolase; Provisional
Probab=91.67 E-value=1.4 Score=45.88 Aligned_cols=75 Identities=8% Similarity=0.054 Sum_probs=47.3
Q ss_pred eeehhHHhhhhCCCcC-eeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHH
Q 012253 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~-k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v 100 (467)
.|..++.++.+|.+|- ++ .|.+.... .+..+. .-...|++++|+++|++|+|||.+.+. +......-..
T Consensus 259 vl~s~~~a~~~g~~~~~~I-~g~~~~~~---~~~~~~-~~~~~a~~~al~~agi~~~did~~ei~-----d~f~~~~~~~ 328 (394)
T PRK09051 259 VLAEADAAEARGLKPLARL-VGYAHAGV---DPEYMG-IGPVPATQKALERAGLTVADLDVIEAN-----EAFAAQACAV 328 (394)
T ss_pred EEecHHHHHHCCCCccEEE-EEEEEecc---CCCccc-ccHHHHHHHHHHHcCCCHHHcCEEEec-----CccHHHHHHH
Confidence 3555666666676653 44 35554431 222222 233689999999999999999999972 2233445556
Q ss_pred HHHhcc
Q 012253 101 MQIFEK 106 (467)
Q Consensus 101 ~~~Lgl 106 (467)
.+.||+
T Consensus 329 ~e~lg~ 334 (394)
T PRK09051 329 TRELGL 334 (394)
T ss_pred HHHhCC
Confidence 678886
No 148
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=91.64 E-value=1.5 Score=45.79 Aligned_cols=74 Identities=12% Similarity=0.134 Sum_probs=44.5
Q ss_pred eehhHHhhhhCCCcC-eeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHH
Q 012253 23 VLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLM 101 (467)
Q Consensus 23 v~~~el~~~~g~~~~-k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~ 101 (467)
|..++.++..|..|- ++ .|.+.... .+..... -...|++++|+++|++|+|||.+.+ . |......-...
T Consensus 265 l~s~~~A~~lg~~p~a~I-~g~~~~~~---~~~~~~~-~~~~a~~~al~~Agl~~~DId~~ei----~-D~f~~~~l~~~ 334 (401)
T PRK09050 265 LASEAAAKKHGLTPRARI-LGMATAGV---EPRIMGI-GPAPATRKLLARLGLTIDQFDVIEL----N-EAFAAQGLAVL 334 (401)
T ss_pred EecHHHHHHCCCCccEEE-EEEEEecc---CCccccc-hHHHHHHHHHHHcCCCHHHCCcccc----C-cHhHHHHHHHH
Confidence 455566665665443 33 35554321 2222222 2357999999999999999999984 2 22333344556
Q ss_pred HHhcc
Q 012253 102 QIFEK 106 (467)
Q Consensus 102 ~~Lgl 106 (467)
+.||+
T Consensus 335 e~lg~ 339 (401)
T PRK09050 335 RQLGL 339 (401)
T ss_pred HHcCC
Confidence 77886
No 149
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=91.16 E-value=0.68 Score=47.28 Aligned_cols=90 Identities=11% Similarity=-0.052 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC---CcChH--HHHHHHHHHHH
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST---NACYG--GTAALFNCVNW 134 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~---~aC~g--g~~AL~~A~~~ 134 (467)
..+|.+++|++++++|++||.|+ .+|.+... ...-+..+.+.|+.. .......-.+ .-|.+ |...+..+...
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~-d~~e~~A~~~~f~~~-~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~ 313 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYR-FKEAALAEMRLFRVR-KEFFDLWHPAECIGEIGAAIGPALLGVALAA 313 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccc-hHHHHHHHHHHhhhc-cCCCceecchHhhcchHHHHHHHHHHHHHHH
Confidence 45889999999999999999988 45544432 334455566676631 1112222222 23443 44444445556
Q ss_pred HHhCCCCCCEEEEEEeec
Q 012253 135 VESASWDGRYGLVVCTDS 152 (467)
Q Consensus 135 l~a~~~~~~~aLVV~sD~ 152 (467)
++.+..|+.++||.+++-
T Consensus 314 ~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 314 SRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HHcCcCCCCcEEEEecCC
Confidence 667777888999998863
No 150
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=91.08 E-value=1.2 Score=46.31 Aligned_cols=129 Identities=13% Similarity=0.163 Sum_probs=67.8
Q ss_pred eehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHH
Q 012253 23 VLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQ 102 (467)
Q Consensus 23 v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~ 102 (467)
+..++.++.+|..+--+..|.+.... .+..... -...|++++|+++|++|+|||.+.+. |......-...+
T Consensus 257 l~s~~~A~~~g~~~~~~i~g~~~~~~---~~~~~~~-~~~~a~~~al~~agl~~~did~~ei~-----d~f~~~~l~~~e 327 (391)
T PRK07661 257 LMDREKAESDGLKPLAKFRSFAVAGV---PPEVMGI-GPIAAIPKALKLAGLELSDIGLFELN-----EAFASQSIQVIR 327 (391)
T ss_pred EecHHHHHHCCCCceEEEEEEEEecC---CCcccch-HHHHHHHHHHHHcCCCHHHCCEEEeC-----CHHHHHHHHHHH
Confidence 45556666667655523345555431 1222222 34689999999999999999999942 222233333445
Q ss_pred HhcccC-CCCeeEE--eeCC--cChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecccccCCCCCCccccceeEEEecC
Q 012253 103 IFEKYG-NTDIEGV--DSTN--ACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGP 175 (467)
Q Consensus 103 ~Lgl~G-~~~~~~~--di~~--aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~~y~~~~~~~t~GdGAvA~Ll~~ 175 (467)
.||+.. +-+..+- -.++ +++|.-..+.++..+-+ . ++++.|+..+- .|..+.|+||++
T Consensus 328 ~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~-~--~~~~g~~~~c~------------~gg~g~a~~~e~ 390 (391)
T PRK07661 328 ELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKR-R--NEQFGIVTMCI------------GGGMGAAGVFEL 390 (391)
T ss_pred HcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHh-c--CCCeEEEEEcc------------ccChhhEEEEEe
Confidence 777511 0111111 1122 44554444444444433 2 34666665432 355556777653
No 151
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=90.96 E-value=1.7 Score=45.69 Aligned_cols=61 Identities=10% Similarity=0.082 Sum_probs=37.7
Q ss_pred eeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEE
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~ 85 (467)
.|..++.++..+..|-.+..|.+... ..+..+.......|++++|+++|++++|||.+.+-
T Consensus 275 vl~see~A~~l~~~p~~~i~g~~~~~---~~~~~~~~~~~~~a~~~al~~AGl~~~DiD~~Ei~ 335 (428)
T PRK08963 275 LLMSESRAKALGLTPLGYLRSYAFAA---IDVWQDMLLGPAYATPLALERAGLTLADLTLIDMH 335 (428)
T ss_pred EEecHHHHHHcCCCccEEEEEEeccc---CCchhhhhhHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 34555566555655542223444332 12222333445679999999999999999999874
No 152
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=90.74 E-value=1.6 Score=45.49 Aligned_cols=74 Identities=7% Similarity=0.063 Sum_probs=45.7
Q ss_pred eehhHHhhhhCCCcC-eeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHH
Q 012253 23 VLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLM 101 (467)
Q Consensus 23 v~~~el~~~~g~~~~-k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~ 101 (467)
|..++.++.+|..+- ++ .|.+... . .+..... -...|++++|+++|++|+|||.+.+ . |......-...
T Consensus 265 l~se~~a~~~g~~~~a~i-~g~~~~~--~-~~~~~~~-~~~~A~~~al~~Agi~~~did~~ei----~-D~f~~~~l~~~ 334 (399)
T PRK09052 265 LVSEKALKQFNLTPLARF-VSFAVAG--V-PPEIMGI-GPIEAIPAALKQAGLKQDDLDWIEL----N-EAFAAQSLAVI 334 (399)
T ss_pred EecHHHHHHCCCCeeEEE-EEEEEec--c-CCCccch-hHHHHHHHHHHHcCCCHHHcCEEEe----C-cHHHHHHHHHH
Confidence 455666666666554 33 4555443 1 2222222 4468999999999999999999983 2 22233444556
Q ss_pred HHhcc
Q 012253 102 QIFEK 106 (467)
Q Consensus 102 ~~Lgl 106 (467)
+.||+
T Consensus 335 e~lg~ 339 (399)
T PRK09052 335 RDLGL 339 (399)
T ss_pred HHhCC
Confidence 77776
No 153
>PRK05790 putative acyltransferase; Provisional
Probab=90.56 E-value=2.4 Score=44.00 Aligned_cols=75 Identities=13% Similarity=0.075 Sum_probs=45.1
Q ss_pred eeehhHHhhhhCCCcC-eeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHH
Q 012253 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~-k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v 100 (467)
.|..+|.++.++.++- ++ .|.+... . .+..... -...|++++++++|++|+|||.+.+. |......-..
T Consensus 258 vl~s~e~a~~~~~~~~~~I-~g~~~~~--~-~~~~~~~-~~~~a~~~a~~~Agi~~~did~~e~~-----d~f~~~~l~~ 327 (393)
T PRK05790 258 VVMSEAKAKELGLTPLARI-VSYAVAG--V-DPAIMGI-GPVPAIRKALEKAGWSLADLDLIEIN-----EAFAAQALAV 327 (393)
T ss_pred EEecHHHHHHCCCCeeEEE-EEEEEcc--C-CCCccch-hHHHHHHHHHHHcCCCHHHCCEEEeC-----cHHHHHHHHH
Confidence 3555566666665554 33 4666543 1 2222222 23579999999999999999999852 2222333345
Q ss_pred HHHhcc
Q 012253 101 MQIFEK 106 (467)
Q Consensus 101 ~~~Lgl 106 (467)
.+.||+
T Consensus 328 ~e~lg~ 333 (393)
T PRK05790 328 EKELGL 333 (393)
T ss_pred HHHhCC
Confidence 667775
No 154
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=90.48 E-value=2.9 Score=43.34 Aligned_cols=41 Identities=7% Similarity=0.017 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcc
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
...|++++|+++|++|+|||.+.+ .+ ......-...+.||+
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei----~d-aFa~~~l~~~e~lg~ 322 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFEL----NE-AFAAQALPCLKDLGL 322 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEE----cc-ccHHHHHHHHHHcCC
Confidence 467899999999999999999988 22 233444455677776
No 155
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=90.28 E-value=2.2 Score=44.19 Aligned_cols=60 Identities=12% Similarity=0.067 Sum_probs=38.4
Q ss_pred eeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEE
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~ 85 (467)
.|..++.++.++.+|--+..|.+.... .++.. ..-...|++++|+++|++|+|||.+.+.
T Consensus 253 vl~s~~~A~~~~~~~~~~i~g~g~~~~---~~~~~-~~~~~~a~~~a~~~Agi~~~did~~e~~ 312 (386)
T TIGR01930 253 LLMSEERAKELGLTPLARIVSFAVAGV---DPEIM-GLGPVPAIPKALKKAGLSISDIDLFEIN 312 (386)
T ss_pred EEecHHHHHHCCCCccEEEEEEEEecC---CCccc-cccHHHHHHHHHHHcCCCHHHCCeeehc
Confidence 355566666667665322346665432 22222 2233589999999999999999999653
No 156
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=90.15 E-value=1.6 Score=37.59 Aligned_cols=95 Identities=17% Similarity=0.248 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccC---CCCeeEEeeCC--cChHHHHHHHHHHHH
Q 012253 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG---NTDIEGVDSTN--ACYGGTAALFNCVNW 134 (467)
Q Consensus 60 ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G---~~~~~~~di~~--aC~gg~~AL~~A~~~ 134 (467)
=.+.|++++|+++|++++|||.+.+- +..-+..-...+.||+.. |++=-++-+.+ +|+|....+..+..+
T Consensus 23 ~p~~A~~~al~~ag~~~~did~~Ei~-----EaFA~~~l~~~~~lg~~~~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 23 GPVPAARKALERAGLTPDDIDVIEIN-----EAFAAQVLAFLEALGLDPEKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp THHHHHHHHHHHHT--GGGESEEEE-------SBHHHHHHHHHHHTTGGGGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCccccchhhcc-----chhhhHHHHhhccccccccccCcccccccccccccccccchhhhhHHHH
Confidence 34579999999999999999999983 223345567777787611 11111112222 666666666666665
Q ss_pred HHhCCCCCCEEEEEEeecccccCCCCCCccccceeEEEec
Q 012253 135 VESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIG 174 (467)
Q Consensus 135 l~a~~~~~~~aLVV~sD~~~y~~~~~~~t~GdGAvA~Ll~ 174 (467)
-..+ +++.|+-.+- .|..+.|+||+
T Consensus 98 ~~~~---~~~gla~~~~------------ggG~g~a~lle 122 (123)
T PF02803_consen 98 RRRG---GRYGLAAICA------------GGGQGSAVLLE 122 (123)
T ss_dssp HHHT---TSEEEEEEEE------------TTTEEEEEEEE
T ss_pred HHhc---hhhhhHHhcc------------cceeeEEEEEE
Confidence 4433 3666655432 45566777775
No 157
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=90.05 E-value=2.6 Score=43.80 Aligned_cols=75 Identities=8% Similarity=-0.032 Sum_probs=44.8
Q ss_pred eeehhHHhhhhCCCcC-eeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHH
Q 012253 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~-k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v 100 (467)
.|..++-++.+|..+- ++ .|.+... . .+.... .-...|++++|+++|++|+|||.+.+. +......-..
T Consensus 258 vl~s~~~A~~~g~~~~a~i-~g~~~~~--~-~~~~~~-~~~~~a~~~al~~agl~~~dId~~e~~-----d~f~~~~~~~ 327 (393)
T PRK05656 258 LLMSAAKAKALGLPVLAKI-AAYANAG--V-DPAIMG-IGPVSATRRCLDKAGWSLAELDLIEAN-----EAFAAQSLAV 327 (393)
T ss_pred EEecHHHHHHCCCCeeEEE-EEEEEec--C-CCcccc-hhHHHHHHHHHHHcCCCHHHCCEEEec-----CccHHHHHHH
Confidence 3455566666665543 33 3555432 1 222211 123579999999999999999999972 2233444456
Q ss_pred HHHhcc
Q 012253 101 MQIFEK 106 (467)
Q Consensus 101 ~~~Lgl 106 (467)
.+.||+
T Consensus 328 ~e~lg~ 333 (393)
T PRK05656 328 GKELGW 333 (393)
T ss_pred HHHhCC
Confidence 677775
No 158
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=89.48 E-value=0.93 Score=46.22 Aligned_cols=83 Identities=14% Similarity=0.157 Sum_probs=58.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCC-Cee-EE---eeCC-cChHHHHHHH
Q 012253 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIE-GV---DSTN-ACYGGTAALF 129 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~-~~~-~~---di~~-aC~gg~~AL~ 129 (467)
.+...+..+++++|+++|++++|||.+++..-+ +.+--.+++.||+ ++ .+. .+ ++.| ++++...+|.
T Consensus 205 ~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~-----~~~~~~~~~~lgl--~~ek~~~~~~~~~~GNt~sAsipl~L~ 277 (345)
T TIGR00748 205 AYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPN-----GKFYLVAARMLGF--PKEQVKPGLLTPRIGNTYSGATPVGLS 277 (345)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCC-----hHHHHHHHHHcCC--CHHHeeccccccccCchhhhHHHHHHH
Confidence 467778899999999999999999999984322 2244457888887 32 222 11 5555 7778778887
Q ss_pred HHHHHHHhCCCCCCEEEEEE
Q 012253 130 NCVNWVESASWDGRYGLVVC 149 (467)
Q Consensus 130 ~A~~~l~a~~~~~~~aLVV~ 149 (467)
.+...++ +|+++|+++
T Consensus 278 ~~~~~~~----~Gd~vll~~ 293 (345)
T TIGR00748 278 AVLDIAE----PGDRILAVS 293 (345)
T ss_pred HHHHhcC----CCCEEEEEE
Confidence 7765332 678888876
No 159
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=89.34 E-value=2.6 Score=43.77 Aligned_cols=74 Identities=9% Similarity=0.145 Sum_probs=43.2
Q ss_pred eehhHHhhhhCCCc-CeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHH
Q 012253 23 VLQEALEVHDGVSK-GKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLM 101 (467)
Q Consensus 23 v~~~el~~~~g~~~-~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~ 101 (467)
|..++.++..+..+ .++ .|.+... ...++.......|++++|+++|++|+|||.+.+. |......-...
T Consensus 259 l~s~~~A~~~~~~~~a~I-~g~~~~~----~~~~~~~~~~~~a~~~al~~Agi~~~Did~~Ei~-----d~f~~~~l~~~ 328 (394)
T PLN02644 259 LVSGEKALELGLQVIAKI-RGYADAA----QAPELFTTAPALAIPKALKHAGLEASQVDYYEIN-----EAFSVVALANQ 328 (394)
T ss_pred eccHHHHHHCCCCeEEEE-EEEEEcC----CCCcccchhHHHHHHHHHHHcCCCHHHCCEEEeC-----cHHHHHHHHHH
Confidence 44445555555544 233 3444322 1112233334569999999999999999999972 22233344556
Q ss_pred HHhcc
Q 012253 102 QIFEK 106 (467)
Q Consensus 102 ~~Lgl 106 (467)
+.||+
T Consensus 329 e~lg~ 333 (394)
T PLN02644 329 KLLGL 333 (394)
T ss_pred HHhCC
Confidence 67776
No 160
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=88.17 E-value=2.8 Score=43.64 Aligned_cols=75 Identities=16% Similarity=0.100 Sum_probs=44.3
Q ss_pred eehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHH
Q 012253 23 VLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQ 102 (467)
Q Consensus 23 v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~ 102 (467)
|..++.++..+..|-.+..|.+.. .. ...+.......|++++|+++|++|+|||.+.+ . |......-...+
T Consensus 259 l~s~~~A~~~~~~p~~~i~g~~~~--~~--~~~~~~~~~~~a~~~al~~agl~~~did~~e~----~-d~f~~~~l~~~e 329 (393)
T PRK08235 259 LMSEDRAKQEGRKPLATILAHTAI--AV--EAKDFPRTPGYAINALLEKTGKTVEDIDLFEI----N-EAFAAVALASTE 329 (393)
T ss_pred EecHHHHHHCCCCceEEEEEEEec--cc--ChhhhcchHHHHHHHHHHHhCCCHHHCCeehh----c-chhHHHHHHHHH
Confidence 445555555555554333343322 11 11222234568999999999999999999974 2 223344445667
Q ss_pred Hhcc
Q 012253 103 IFEK 106 (467)
Q Consensus 103 ~Lgl 106 (467)
.||+
T Consensus 330 ~lg~ 333 (393)
T PRK08235 330 IAGI 333 (393)
T ss_pred HhCC
Confidence 7776
No 161
>PLN02287 3-ketoacyl-CoA thiolase
Probab=87.90 E-value=3.8 Score=43.48 Aligned_cols=100 Identities=11% Similarity=0.119 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccC-CCCeeEE--eeCC--cChHHHHHHHHHHHHH
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTDIEGV--DSTN--ACYGGTAALFNCVNWV 135 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G-~~~~~~~--di~~--aC~gg~~AL~~A~~~l 135 (467)
...|++++|+++|++|+|||.+.+. + ..........+.||+.. +-|..+= -+++ ++.|....+.++..+-
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----d-aFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~ 407 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----E-AFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMK 407 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----c-hHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999753 2 22222333456777621 0111111 1122 4444444444444433
Q ss_pred HhCCCCCCEEEEEEeecccccCCCCCCccccceeEEEecCCCC
Q 012253 136 ESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAP 178 (467)
Q Consensus 136 ~a~~~~~~~aLVV~sD~~~y~~~~~~~t~GdGAvA~Ll~~~~~ 178 (467)
+.+. +++++|+..+- .|--++||||+.-+.
T Consensus 408 ~~~~-~~~~gl~~~c~------------ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 408 RRGK-DCRFGVVSMCI------------GTGMGAAAVFERGDS 437 (452)
T ss_pred hcCC-CCCeeEEEEcc------------ccCceeEEEEEecCc
Confidence 3221 11566655432 455568889887653
No 162
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=87.85 E-value=1.9 Score=44.34 Aligned_cols=30 Identities=20% Similarity=0.377 Sum_probs=25.8
Q ss_pred hcCCCCccccceeccCCchHHHHHHHHHhh
Q 012253 236 EGRQFSMLDVDYFVFHSPYNKLVQKSFARL 265 (467)
Q Consensus 236 ~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l 265 (467)
++++++++|||++.+|++|..+.....+.|
T Consensus 269 ~~Agl~~~Did~~ei~eafa~~~~~~~e~l 298 (361)
T PRK06690 269 NEMNMKVEDIDYFEINEAFASKVVACAKEL 298 (361)
T ss_pred HHcCCCHHHcCEeeecchhHHHHHHHHHhc
Confidence 445799999999999999999888877776
No 163
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=87.62 E-value=2.3 Score=44.37 Aligned_cols=57 Identities=12% Similarity=0.159 Sum_probs=35.7
Q ss_pred eehhHHhhhhCCCcC-eeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 23 VLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 23 v~~~el~~~~g~~~~-k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
|..+|.++..+..+- ++ .|.+.... .++..... ...|++++|+++|++|+|||.+..
T Consensus 271 l~s~e~A~~~~~~~~a~I-~g~~~~~~---~~~~~~~~-~~~a~~~al~~Agi~~~did~~ei 328 (406)
T PRK07851 271 IMSDTKARELGLTPLARI-VSTGVSGL---SPEIMGLG-PVEASKQALARAGMSIDDIDLVEI 328 (406)
T ss_pred EccHHHHHHcCCCccEEE-EEEEEccC---CCCccchh-HHHHHHHHHHHhCCCHHHCCeehh
Confidence 455555555565553 33 45554421 12212222 458999999999999999999964
No 164
>PRK08256 lipid-transfer protein; Provisional
Probab=86.72 E-value=4.8 Score=41.73 Aligned_cols=30 Identities=13% Similarity=0.118 Sum_probs=26.0
Q ss_pred cCCCCccccceeccCCchHHHHHHHHHhhh
Q 012253 237 GRQFSMLDVDYFVFHSPYNKLVQKSFARLF 266 (467)
Q Consensus 237 ~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~ 266 (467)
.++++++|||.+-+|.+|.-+....++.|.
T Consensus 276 ~ag~~~~DiD~~ei~d~f~~~~l~~le~lg 305 (391)
T PRK08256 276 QAGIGPEDIDVVELHDCFSANELLTYEALG 305 (391)
T ss_pred HcCCCHHHCCEEeeccCCcHHHHHHHHHcC
Confidence 347899999999999999998888888774
No 165
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=86.62 E-value=2.4 Score=43.73 Aligned_cols=88 Identities=14% Similarity=0.128 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHh-----cccCCCCee-EE-eeCC-cChHHHHHHH
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIF-----EKYGNTDIE-GV-DSTN-ACYGGTAALF 129 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~L-----gl~G~~~~~-~~-di~~-aC~gg~~AL~ 129 (467)
.....++.+++|+++|+.++|||.++... ..+.+--.+.+.| |+. ..++. .+ +++| +|++...+|.
T Consensus 271 ~~~~~~~i~~~L~~~gl~~~DId~~v~Hq-----~n~~~~~~v~~~l~~~~~gl~-~~k~~~~~~~~GNt~sAsipi~L~ 344 (378)
T PRK06816 271 VVYTIKPLLELVDKRNLDPDDIDYFLPHY-----SSEYFREKIVELLAKAGFMIP-EEKWFTNLATVGNTGSASIYIMLD 344 (378)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEeeCc-----ccHHHHHHHHHHHHhccCCCC-hhheEEeccccccccchHHHHHHH
Confidence 34557888999999999999999999743 2334445667766 651 12222 22 3333 6677777776
Q ss_pred HHHHHHHhCC-CCCCEEEEEEeeccc
Q 012253 130 NCVNWVESAS-WDGRYGLVVCTDSAV 154 (467)
Q Consensus 130 ~A~~~l~a~~-~~~~~aLVV~sD~~~ 154 (467)
.+ ++.+. .+|+++++++.+...
T Consensus 345 ~a---~~~g~~~~Gd~vl~~~~~s~~ 367 (378)
T PRK06816 345 EL---LNSGRLKPGQKILCFVPESGR 367 (378)
T ss_pred HH---HHcCCCCCCCEEEEEEecccc
Confidence 55 34443 277889888777553
No 166
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=86.08 E-value=8.2 Score=40.11 Aligned_cols=45 Identities=16% Similarity=0.149 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcc
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
.......|++++++++|++|+|||.+.+-- ......-...+.||+
T Consensus 286 ~~~~~~~a~~~a~~~agl~~~Did~~Ei~d-----~Fa~~~l~~~e~lG~ 330 (390)
T PRK06504 286 MLEAPLPATERALKKAGMKIDDIDLYEVNE-----AFASVPLAWLKATGA 330 (390)
T ss_pred hhccHHHHHHHHHHHcCCCHHHCCEEEecc-----cchHHHHHHHHHhCC
Confidence 334556799999999999999999998742 233444566778887
No 167
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=85.25 E-value=8.6 Score=39.88 Aligned_cols=41 Identities=7% Similarity=0.086 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcc
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
...|++++|+++|++|+|||.+.+- |......-...+.||+
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~-----d~F~~~~l~~~e~lg~ 324 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELN-----EAFAAQSLPCLKDLGL 324 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec-----ccchHHHHHHHHHcCC
Confidence 4678999999999999999999863 2233444455677776
No 168
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=85.20 E-value=8.8 Score=39.89 Aligned_cols=29 Identities=17% Similarity=0.330 Sum_probs=24.6
Q ss_pred cCCCCccccceeccCCchHHHHHHHHHhh
Q 012253 237 GRQFSMLDVDYFVFHSPYNKLVQKSFARL 265 (467)
Q Consensus 237 ~~~~~~~d~d~~i~H~p~~k~~~k~~~~l 265 (467)
.++++++|||++=+|-+|.-+.-...+.|
T Consensus 304 ~Agl~~~dId~~e~~d~f~~~~l~~~e~l 332 (394)
T PRK06445 304 KAGLSVKDIDLWEINEAFAVVVLYAIKEL 332 (394)
T ss_pred HcCCCHHHcCEEEecccchHHHHHHHHHh
Confidence 34788999999999999998877777766
No 169
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=85.05 E-value=3.2 Score=43.13 Aligned_cols=58 Identities=16% Similarity=0.121 Sum_probs=35.0
Q ss_pred eehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 23 VLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 23 v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
|..++.++.+|..+-.+..|.+... . +++... .-...|++++|+++|++|+|||.+.+
T Consensus 258 l~s~~~A~~~g~~~~~~i~g~~~~~--~-~~~~~~-~~~~~a~~~al~~agl~~~Did~~ei 315 (392)
T PRK07108 258 VMNAKVAEREGLQPLGIFRGFAVAG--C-EPDEMG-IGPVFAVPKLLKQAGLKVDDIDLWEL 315 (392)
T ss_pred EecHHHHHHCCCCceEEEEEEEEec--c-CCcccc-hhHHHHHHHHHHHcCCCHHHcCchHh
Confidence 3444555555544432223444332 1 222222 23468999999999999999999973
No 170
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=84.53 E-value=3 Score=41.77 Aligned_cols=80 Identities=16% Similarity=-0.025 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCC-ee-EE-eeCC-cChHHHHHHHHHHHHHH
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IE-GV-DSTN-ACYGGTAALFNCVNWVE 136 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~-~~-~~-di~~-aC~gg~~AL~~A~~~l~ 136 (467)
..++.+++|+++|++++|||.+++.. ..+.+-..+.+.||+ +.+ +. .+ +++| +|++...+|. .+++
T Consensus 227 ~~~~i~~~L~~~g~~~~did~~~~h~-----~~~~~~~~~~~~lg~--~~~~~~~~~~~~Gn~~sas~~~~L~---~~~~ 296 (325)
T PRK12879 227 MPKGARQVLEKAGLTKDDIDWVIPHQ-----ANLRIIESLCEKLGI--PMEKTLVSVEYYGNTSAATIPLALD---LALE 296 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHcCC--CHHHhhhhHhhhCchHHHHHHHHHH---HHHH
Confidence 45678899999999999999999853 234556688999998 332 21 11 2222 3333444443 4455
Q ss_pred hCC-CCCCEEEEEEe
Q 012253 137 SAS-WDGRYGLVVCT 150 (467)
Q Consensus 137 a~~-~~~~~aLVV~s 150 (467)
.+. .+|+++|+++.
T Consensus 297 ~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 297 QGKIKPGDTLLLYGF 311 (325)
T ss_pred cCCCCCCCEEEEEEE
Confidence 553 26788888774
No 171
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=84.25 E-value=3 Score=41.96 Aligned_cols=80 Identities=11% Similarity=0.059 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC---C-cChHHHHHHHHHHHHH
Q 012253 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST---N-ACYGGTAALFNCVNWV 135 (467)
Q Consensus 60 ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~---~-aC~gg~~AL~~A~~~l 135 (467)
....+++++|+++|++++|||.+++.. ..+.+-..|.+.||+ +++-....+. | +|++...+|..+ +
T Consensus 227 ~~~~~i~~~L~~~g~~~~did~~~~hq-----~~~~~~~~~~~~lgl--~~~k~~~~l~~~Gn~~sasi~~~L~~~---~ 296 (326)
T CHL00203 227 QVPAVIIKCLNALNISIDEVDWFILHQ-----ANKRILEAIANRLSV--PNSKMITNLEKYGNTSAASIPLALDEA---I 296 (326)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCC--CHHHhhhHHHhhCcHHHHHHHHHHHHH---H
Confidence 345568999999999999999999843 234455678999998 4322222232 2 333444444433 4
Q ss_pred HhCC-CCCCEEEEEE
Q 012253 136 ESAS-WDGRYGLVVC 149 (467)
Q Consensus 136 ~a~~-~~~~~aLVV~ 149 (467)
+.+. .+|.++|+++
T Consensus 297 ~~g~~~~Gd~vll~~ 311 (326)
T CHL00203 297 QNNKIQPGQIIVLSG 311 (326)
T ss_pred HhCCCCCCCEEEEEE
Confidence 5543 2677888876
No 172
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=84.25 E-value=3.3 Score=41.65 Aligned_cols=82 Identities=7% Similarity=-0.012 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC--CcChHHHHHHHHHHHHHHh
Q 012253 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST--NACYGGTAALFNCVNWVES 137 (467)
Q Consensus 60 ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~--~aC~gg~~AL~~A~~~l~a 137 (467)
...++.+++|+++|++++|||.+++... ...+-..+++.||+ +++.....+. ..|.+...-+.+ ..+++.
T Consensus 231 ~~~~~i~~~L~~~gl~~~did~~~~H~~-----~~~~~~~i~~~l~l--~~e~~~~~~~~~Gn~~sas~~~~L-~~~~~~ 302 (329)
T PRK07204 231 YLMKFIDKLLMDAGYTLADIDLIVPHQA-----SGPAMRLIRKKLGV--DEERFVTIFEDHGNMIAASIPVAL-FEAIKQ 302 (329)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCC-----CHHHHHHHHHHcCC--CHHHhhhhHhhhCcHHHHHHHHHH-HHHHHc
Confidence 3457888999999999999999997432 22345688999998 3322211222 233332222222 234555
Q ss_pred CC-CCCCEEEEEE
Q 012253 138 AS-WDGRYGLVVC 149 (467)
Q Consensus 138 ~~-~~~~~aLVV~ 149 (467)
+. .+|.++|+++
T Consensus 303 g~~~~Gd~vll~~ 315 (329)
T PRK07204 303 KKVQRGNKILLLG 315 (329)
T ss_pred CCCCCCCEEEEEE
Confidence 53 2677888775
No 173
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=84.21 E-value=11 Score=35.97 Aligned_cols=94 Identities=12% Similarity=-0.047 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccC-CCCeeEEeeCC-cChHHHHHHHHHHHH
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTDIEGVDSTN-ACYGGTAALFNCVNW 134 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G-~~~~~~~di~~-aC~gg~~AL~~A~~~ 134 (467)
......++.+++|+++|++++|||.++..........+..........+... +.....-.+.| .++++...|..+...
T Consensus 143 ~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~ 222 (254)
T cd00327 143 SGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLM 222 (254)
T ss_pred ChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHH
Confidence 4456678899999999999999999986433322222211222222212100 00111223444 566666666666665
Q ss_pred HHhCC-----CCCCEEEEEEe
Q 012253 135 VESAS-----WDGRYGLVVCT 150 (467)
Q Consensus 135 l~a~~-----~~~~~aLVV~s 150 (467)
++.+. .+++++|+.+.
T Consensus 223 ~~~~~~~~~~~~~~~~l~~~~ 243 (254)
T cd00327 223 LEHEFIPPTPREPRTVLLLGF 243 (254)
T ss_pred HhCCCcCCCCCCcCEEEEeeE
Confidence 55441 13466666554
No 174
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=83.75 E-value=5.4 Score=41.52 Aligned_cols=58 Identities=12% Similarity=0.078 Sum_probs=36.9
Q ss_pred eeehhHHhhhhCCCcC-eeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~-k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
.+..++.++.+|..+- ++ .|.+... . ++.. .......|++++|+++|++|+|||.+.+
T Consensus 257 vl~see~A~~~g~~p~a~I-~g~~~~~--~-~~~~-~~~~~~~a~~~Al~~AGl~p~DID~~ei 315 (392)
T PRK06633 257 MVVSEEALKKHNLTPLARI-VSYASAG--V-DPSI-MGTAPVPASQKALSKAGWSVNDLEVIEV 315 (392)
T ss_pred EEecHHHHHHCCCCeeEEE-EEEEEec--C-Ccch-hchHHHHHHHHHHHHcCCCHHHcCeeeh
Confidence 3455666666665553 44 3544432 1 1111 1134468999999999999999999994
No 175
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=83.71 E-value=8.1 Score=40.66 Aligned_cols=63 Identities=13% Similarity=0.092 Sum_probs=38.4
Q ss_pred eeehhHHhhhhCCCcCeeE-EeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEE
Q 012253 22 CVLQEALEVHDGVSKGKYT-VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~-~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~ 85 (467)
.|..++.++..+.+|-++. .+.....-.. ....+.......|++++++++|++|+|||.+.+-
T Consensus 272 vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~-~~~~~~~~~~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 272 LLASEEWAAEHGLPVLAYLVDAETAAVDFV-HGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred EEecHHHHHHcCCCceEEEEEEEEEcCCcc-cccchhhccHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 4666677776666664332 2221111000 1113344455679999999999999999999984
No 176
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=83.66 E-value=4.2 Score=43.72 Aligned_cols=119 Identities=18% Similarity=0.099 Sum_probs=66.5
Q ss_pred eeehhHHhhhhCCCcCe--eEEeccceEe--eccCCCCCH--HHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCc
Q 012253 22 CVLQEALEVHDGVSKGK--YTVGLGQDCM--AFCSEVEDV--ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKS 95 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k--~~~Gig~r~~--av~~~~Ed~--~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps 95 (467)
.|..++.++..++++.+ |..|.+...- .+ ..+.+. ......|++++++++|++++|||.+.+-++.+ .
T Consensus 250 il~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~-~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~-----~ 323 (498)
T PRK08257 250 LLTSVAKARRLGVPEDRWVYLHGGADAHDPYDI-LERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFP-----S 323 (498)
T ss_pred EEeeHHHHHhcCCCCCceEEEEEEEEeeCcccc-ccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCH-----H
Confidence 46777777777775544 2345544321 11 112222 22234699999999999999999998854432 3
Q ss_pred HHHHHHHHhcccCCCCeeEEeeCCc-----ChH---HHHHHHHHHHHHHhCCCCCCEEEEEE
Q 012253 96 IKTFLMQIFEKYGNTDIEGVDSTNA-----CYG---GTAALFNCVNWVESASWDGRYGLVVC 149 (467)
Q Consensus 96 ~a~~v~~~Lgl~G~~~~~~~di~~a-----C~g---g~~AL~~A~~~l~a~~~~~~~aLVV~ 149 (467)
.--.-.+.||+... +-..+.++.| -.+ ++.++--+...|+.. +++++||.+
T Consensus 324 ~~~~~~E~LGl~~~-g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~--~~~~gLv~~ 382 (498)
T PRK08257 324 AVQVAARELGLDLD-DPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN--PGRRGLVTA 382 (498)
T ss_pred HHHHHHHHcCcCCC-CCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc--CCCEEEEEC
Confidence 33455678887422 1123333222 222 344455455666654 447777754
No 177
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=83.12 E-value=9.5 Score=38.02 Aligned_cols=78 Identities=12% Similarity=-0.071 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEE----eeCC-cChHHHHHHHHHH
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV----DSTN-ACYGGTAALFNCV 132 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~----di~~-aC~gg~~AL~~A~ 132 (467)
.....++++++|+++|+.++|||.++..........+-....+...++. ..+... .+.| .++++...|..+.
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~---~~~~~~~~~~~~G~~~aas~~~~l~~~~ 280 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGD---KSPAVSATKAMTGNLSSAAVVLAVDEAV 280 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCC---CCceeECCCcccccchhHhHHHHHHHHH
Confidence 3455588999999999999999999975544332222223333333331 112222 3343 5666667777776
Q ss_pred HHHHhC
Q 012253 133 NWVESA 138 (467)
Q Consensus 133 ~~l~a~ 138 (467)
..++.+
T Consensus 281 ~~~~~~ 286 (332)
T cd00825 281 LMLEHG 286 (332)
T ss_pred HHHhcC
Confidence 666655
No 178
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=82.90 E-value=4.8 Score=40.61 Aligned_cols=83 Identities=7% Similarity=0.025 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCee--EEeeCCcChH--HHHHHHHHHH
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIE--GVDSTNACYG--GTAALFNCVN 133 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~--~~di~~aC~g--g~~AL~~A~~ 133 (467)
.....++.+++|+++|++++|||.+++.. ..+.+-..+.+.||+ +++-. .++--..|.+ -..+|..+
T Consensus 238 ~~~~~~~~~~~L~~~g~~~~did~~i~H~-----~~~~~~~~~~~~lgl--~~~k~~~~~~~~GN~~sas~~~~L~~~-- 308 (338)
T PRK09258 238 VELAVDTWEAFLAQLGWAVEQVDRVICHQ-----VGAAHTRAILKALGI--DPEKVFTTFPTLGNMGPASLPITLAMA-- 308 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEecCC-----CCHHHHHHHHHHhCC--CHHHceehHhhhCCcHHhHHHHHHHHH--
Confidence 34555688899999999999999999853 244556688999998 33221 2221233443 33444333
Q ss_pred HHHhCC-CCCCEEEEEEe
Q 012253 134 WVESAS-WDGRYGLVVCT 150 (467)
Q Consensus 134 ~l~a~~-~~~~~aLVV~s 150 (467)
++.+. .+|+++|+++.
T Consensus 309 -~~~g~~~~Gd~vll~~~ 325 (338)
T PRK09258 309 -AEEGFLKPGDRVALLGI 325 (338)
T ss_pred -HHhCCCCCCCEEEEEEe
Confidence 44543 26788888764
No 179
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=82.18 E-value=7.6 Score=40.43 Aligned_cols=58 Identities=14% Similarity=0.224 Sum_probs=35.0
Q ss_pred eehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 23 VLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 23 v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
|..++.++..|.+|-....|.+ .... .+ .+...-...|++++|+++|++|+|||.+.+
T Consensus 263 l~s~~~a~~~~~~p~~~i~g~~--~~~~-~~-~~~~~~~~~a~~~al~~agl~~~Did~~ei 320 (397)
T PRK06954 263 MMRASTAKRLGLAPLARVVGHS--TFAQ-AP-SKFTTAPVGAIRKLFEKNGWRAAEVDLFEI 320 (397)
T ss_pred EecHHHHHHCCCCceEEEEEEE--eccc-Cc-ccccchHHHHHHHHHHHcCCCHHHCCEEeh
Confidence 4455666666665542223322 1111 11 122234468999999999999999999964
No 180
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=81.23 E-value=9 Score=40.18 Aligned_cols=82 Identities=10% Similarity=0.069 Sum_probs=49.8
Q ss_pred eehhHHhhhhCCCcCeeEEeccceE--eeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHH
Q 012253 23 VLQEALEVHDGVSKGKYTVGLGQDC--MAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTF 99 (467)
Q Consensus 23 v~~~el~~~~g~~~~k~~~Gig~r~--~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~ 99 (467)
+..++.++.+|..+--...|.+... .++..++.+. .-..+|.+++|++++++|+|||.|. ++|.|+.. .+.-...
T Consensus 249 Le~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~-~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~-D~~E~~A 326 (418)
T PRK07910 249 IETEEHAKARGANILARIMGASITSDGFHMVAPDPNG-ERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVG-DVAEGKA 326 (418)
T ss_pred EeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCH-HHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCC-CHHHHHH
Confidence 4445566666654321123433321 1111222222 2367899999999999999999998 56666542 4555678
Q ss_pred HHHHhcc
Q 012253 100 LMQIFEK 106 (467)
Q Consensus 100 v~~~Lgl 106 (467)
|++.||.
T Consensus 327 l~~~fg~ 333 (418)
T PRK07910 327 INNALGG 333 (418)
T ss_pred HHHHhCC
Confidence 8888874
No 181
>PRK06840 hypothetical protein; Validated
Probab=81.23 E-value=6.9 Score=39.53 Aligned_cols=81 Identities=17% Similarity=0.141 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCC-CeeEE-eeCC-cChHHHHHHHHHHHHHH
Q 012253 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGV-DSTN-ACYGGTAALFNCVNWVE 136 (467)
Q Consensus 60 ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~-~~~~~-di~~-aC~gg~~AL~~A~~~l~ 136 (467)
...++.+++|+++|++++|||.+++.. ..+.+-..+++.||+ ++ +...+ ++.| +|++-..+|. .+++
T Consensus 238 ~~~~~i~~~L~~~gl~~~did~~~~h~-----~~~~~~~~~~~~Lgl--~~~~~~~~~~~Gn~~sas~~~~L~---~~~~ 307 (339)
T PRK06840 238 NFLKVIREALRKSGYTPKDIDYLAILH-----MKRSAHIALLEGLGL--TEEQAIYLDEYGHLGQLDQILSLH---LALE 307 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECC-----cCHHHHHHHHHHcCC--CHHHeEeHHhccchhhhhHHHHHH---HHHH
Confidence 345788999999999999999988632 234444568899998 32 22222 2233 3333333443 4455
Q ss_pred hCC-CCCCEEEEEEe
Q 012253 137 SAS-WDGRYGLVVCT 150 (467)
Q Consensus 137 a~~-~~~~~aLVV~s 150 (467)
++. .+|.++|+++.
T Consensus 308 ~~~~~~Gd~ill~~~ 322 (339)
T PRK06840 308 QGKLKDGDLVVLVSA 322 (339)
T ss_pred cCCCCCCCEEEEEEE
Confidence 543 26788888774
No 182
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=80.57 E-value=4.1 Score=41.73 Aligned_cols=98 Identities=9% Similarity=-0.044 Sum_probs=64.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccC---CCCeeEE-eeCC-cChHHHHHHH
Q 012253 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG---NTDIEGV-DSTN-ACYGGTAALF 129 (467)
Q Consensus 55 Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G---~~~~~~~-di~~-aC~gg~~AL~ 129 (467)
+.-.....+|++.++++.|..|+|.|.++|.+-.+- . ...++..|+... .+..... .++| -|.+...+|.
T Consensus 205 ~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k--~---~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~La 279 (377)
T COG3425 205 PAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGK--F---PKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLA 279 (377)
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCc--h---HHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHH
Confidence 345677789999999999999999999999763332 2 334444444310 1333333 3555 6777777776
Q ss_pred HHHHHHHhCCCCCCEEEEEEeecccccCCCCCCccccceeEEEec
Q 012253 130 NCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIG 174 (467)
Q Consensus 130 ~A~~~l~a~~~~~~~aLVV~sD~~~y~~~~~~~t~GdGAvA~Ll~ 174 (467)
...+... . +|+++|+++ +|.||++-..+
T Consensus 280 s~L~~a~--~-~G~rIl~~S--------------YGSGa~s~~fs 307 (377)
T COG3425 280 SLLDNAK--L-PGDRILLFS--------------YGSGAGSEAFS 307 (377)
T ss_pred HHHhhcC--C-CCCEEEEEe--------------eCCCcceeEEE
Confidence 6666554 2 678999876 67777776554
No 183
>PRK04262 hypothetical protein; Provisional
Probab=80.44 E-value=4.2 Score=41.36 Aligned_cols=82 Identities=13% Similarity=0.160 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCC-Cee-EE---eeCC-cChHHHHHHHH
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIE-GV---DSTN-ACYGGTAALFN 130 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~-~~~-~~---di~~-aC~gg~~AL~~ 130 (467)
......++.+++|+++|++++|||.+++.. ..+.+-..+++.||+ ++ ++. .+ +++| ++++-..+|..
T Consensus 207 ~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq-----~n~~~~~~~~~~Lgl--~~ek~~~~~~~~~~GNt~sAsi~~~L~~ 279 (347)
T PRK04262 207 YFKHIISAAKGLMEKLGLKPSDYDYAVFHQ-----PNGKFPLRVAKMLGF--TKEQVKPGLLTPYIGNTYSGSALLGLAA 279 (347)
T ss_pred HHHHHHHHHHHHHHHhCcCHHHhceeecCC-----CchHHHHHHHHHcCC--CHHHhhccchhhhhCChHHHHHHHHHHH
Confidence 345677889999999999999999999852 233445567888887 32 222 11 3343 55555566655
Q ss_pred HHHHHHhCCCCCCEEEEEE
Q 012253 131 CVNWVESASWDGRYGLVVC 149 (467)
Q Consensus 131 A~~~l~a~~~~~~~aLVV~ 149 (467)
+.. +.. +|.++|+++
T Consensus 280 ~~~--~~~--~Gd~vll~~ 294 (347)
T PRK04262 280 VLD--VAK--PGDRILVVS 294 (347)
T ss_pred HHH--hCC--CCCEEEEEe
Confidence 544 222 678888776
No 184
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=80.14 E-value=3.9 Score=42.04 Aligned_cols=83 Identities=14% Similarity=0.227 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHH-hcccCCCCee---EE-eeCC-cChHHHHHHHH
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQI-FEKYGNTDIE---GV-DSTN-ACYGGTAALFN 130 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~-Lgl~G~~~~~---~~-di~~-aC~gg~~AL~~ 130 (467)
+.+...++.+++|+++|++++|||.+++.-.+ +.+--.+.+. ||+ +.+.-. .+ +.+| +|++...+|..
T Consensus 269 ~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~-----~~~~d~~~~~llg~-~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 269 VCPMVAEHIVEHLAENGLTPADVKRFWLHQAN-----INMNQLIGKKVLGR-DATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHhccC-CCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 34456788999999999999999999974222 2222234444 664 112211 12 3333 66666667766
Q ss_pred HHHHHHhCCCCCCEEEEEE
Q 012253 131 CVNWVESASWDGRYGLVVC 149 (467)
Q Consensus 131 A~~~l~a~~~~~~~aLVV~ 149 (467)
+...+ .+|+++|+++
T Consensus 343 ~~~~~----~~Gd~vll~~ 357 (372)
T PRK07515 343 HSDDL----AAGDLGVICS 357 (372)
T ss_pred HhccC----CCCCEEEEEE
Confidence 54322 2678887776
No 185
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=79.69 E-value=12 Score=38.12 Aligned_cols=48 Identities=15% Similarity=0.180 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcc
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
..-..+|.+++|+++|++|+|||.|. ++|.|+.. .+.-...|.+.||.
T Consensus 205 ~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~-D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 205 GDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVG-DLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCC-CHHHHHHHHHHhCC
Confidence 45567899999999999999999988 56666643 45667788888874
No 186
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=79.09 E-value=10 Score=39.55 Aligned_cols=58 Identities=7% Similarity=0.016 Sum_probs=37.7
Q ss_pred eeehhHHhhhhCCCcC-eeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~-k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
.|..++.++..+..|- ++ .|.+.... .+.... .-...|++++|+++|++|+|||.+.+
T Consensus 263 vl~s~~~a~~~~~~p~~~i-~g~~~~~~---~~~~~~-~~~~~a~~~a~~~agl~~~did~~ei 321 (401)
T PRK08131 263 LIGSRAAGEKYGLKPMARI-LSSAAAGV---EPRIMG-IGPVEAIKKALARAGLTLDDMDIIEI 321 (401)
T ss_pred EEeeHHHHHHcCCCceEEE-EEEEEecc---CCcccc-chHHHHHHHHHHHcCCCHHHCCeehh
Confidence 3555666666665554 34 35444421 222222 24568999999999999999999985
No 187
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=78.85 E-value=8.1 Score=39.88 Aligned_cols=80 Identities=18% Similarity=0.058 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEee---CC-cChHHHHHHHHHHHHH
Q 012253 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS---TN-ACYGGTAALFNCVNWV 135 (467)
Q Consensus 60 ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di---~~-aC~gg~~AL~~A~~~l 135 (467)
...++++++|+++|++++|||.+++..- .+.+-..+++.||+ +++-....+ +| ++++...+|..+ +
T Consensus 281 ~~~~~i~~~L~~~gl~~~dId~~v~Hq~-----n~~~~~~~~~~Lgl--~~ek~~~~l~~~GNt~sAsi~~~L~~~---~ 350 (379)
T PLN02326 281 CVPQVIESALQKAGLTAESIDWLLLHQA-----NQRIIDAVAQRLGI--PPEKVISNLANYGNTSAASIPLALDEA---V 350 (379)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCC--CHHHeeecHhhcCcHHHHHHHHHHHHH---H
Confidence 3445788899999999999999987432 33444568999998 433222223 33 444444555444 4
Q ss_pred HhCCC-CCCEEEEEE
Q 012253 136 ESASW-DGRYGLVVC 149 (467)
Q Consensus 136 ~a~~~-~~~~aLVV~ 149 (467)
+.+.. +|+++|+++
T Consensus 351 ~~g~~~~Gd~vll~~ 365 (379)
T PLN02326 351 RSGKVKKGDVIATAG 365 (379)
T ss_pred HcCCCCCCCEEEEEE
Confidence 54432 678888876
No 188
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=78.47 E-value=5.3 Score=40.09 Aligned_cols=85 Identities=12% Similarity=0.034 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC--CcChHHHHHHHHHHHHH
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST--NACYGGTAALFNCVNWV 135 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~--~aC~gg~~AL~~A~~~l 135 (467)
.....++.+++|+++|++++|||.+++.. ..+.+-..+.+.||+ +++-....+. ..|.+...-+.+ ...+
T Consensus 226 ~~~~~~~~~~~L~~~gl~~~did~~~~h~-----~~~~~~~~~~~~l~l--~~~k~~~~l~~~Gn~~sas~~~~L-~~~~ 297 (326)
T PRK05963 226 VRMMSGASQNVLASAAMTPQDIDRFFPHQ-----ANARIVDKVCETIGI--PRAKAASTLETYGNSSAATIPLSL-SLAN 297 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCC-----CCHHHHHHHHHHcCC--CHHHhhhhHHhhCcHHHHHHHHHH-HHHH
Confidence 44556788899999999999999998832 234556678889887 3322111222 233333322222 2334
Q ss_pred HhCC-CCCCEEEEEEe
Q 012253 136 ESAS-WDGRYGLVVCT 150 (467)
Q Consensus 136 ~a~~-~~~~~aLVV~s 150 (467)
+.+. .+|+++|+++.
T Consensus 298 ~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 298 LEQPLREGERLLFAAA 313 (326)
T ss_pred HhCCCCCCCEEEEEEE
Confidence 4442 26788888874
No 189
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=78.13 E-value=2.9 Score=35.50 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=49.1
Q ss_pred HHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcccC-CCCeeEEeeC----C-cChHHHHHHHHHHHH
Q 012253 62 LTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYG-NTDIEGVDST----N-ACYGGTAALFNCVNW 134 (467)
Q Consensus 62 ~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl~G-~~~~~~~di~----~-aC~gg~~AL~~A~~~ 134 (467)
.++.+++|++++++|++||.|. .||.++. ..+.-...+.+.|+-.. ...+..--++ + ..++|+..|..+.-.
T Consensus 28 ~~~i~~al~~agi~~~~I~~i~~hg~Gt~~-~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~ 106 (119)
T PF02801_consen 28 ARAIRRALADAGISPEDIDYIEAHGTGTPL-GDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLA 106 (119)
T ss_dssp HHHHHHHHHHHTS-GGGEEEEE----SSHH-HHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccccceeeeeecccccc-chhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHH
Confidence 6789999999999999999999 4555543 23455667888877521 1224444443 2 567777777777777
Q ss_pred HHhCC
Q 012253 135 VESAS 139 (467)
Q Consensus 135 l~a~~ 139 (467)
++.+.
T Consensus 107 l~~~~ 111 (119)
T PF02801_consen 107 LEHGT 111 (119)
T ss_dssp HHHTE
T ss_pred HhcCC
Confidence 77663
No 190
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=77.47 E-value=8.5 Score=39.98 Aligned_cols=77 Identities=13% Similarity=0.160 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcccCCCCeeEEee----CC-cChHHHHHHHHHHHH
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS----TN-ACYGGTAALFNCVNW 134 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di----~~-aC~gg~~AL~~A~~~ 134 (467)
...|++++|+++|++|+|||.+. ++|.|+.. .+.-...|.+.|+.. ..++..--+ .+ -+++|+..|..+.-.
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~-d~~E~~al~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~ 355 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAG-DKAETQAIKRVFGEH-AYKVAVSSTKSMTGHLLGAAGAVEAIFSVLA 355 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccc-cHHHHHHHHHHhccc-CCCCeeECccchhchhHHHHHHHHHHHHHHH
Confidence 35789999999999999999998 56666542 344455677777641 123332222 23 234444455555555
Q ss_pred HHhCC
Q 012253 135 VESAS 139 (467)
Q Consensus 135 l~a~~ 139 (467)
++.+.
T Consensus 356 l~~~~ 360 (411)
T PRK07314 356 IRDQV 360 (411)
T ss_pred HhCCC
Confidence 66554
No 191
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=76.64 E-value=7.4 Score=38.66 Aligned_cols=85 Identities=13% Similarity=0.082 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC--CcChHHHHHHHHHHHHH
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST--NACYGGTAALFNCVNWV 135 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~--~aC~gg~~AL~~A~~~l 135 (467)
.....++.+++|+++|++++|||.+++... .+.+-..+.+.||+ +++-....+. ..|.+...-+.+ ...+
T Consensus 222 ~~~~~~~i~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lgl--~~~~~~~~~~~~Gn~~sas~~~~L-~~~~ 293 (320)
T cd00830 222 VRLMPESIEEALEKAGLTPDDIDWFVPHQA-----NLRIIEAVAKRLGL--PEEKVVVNLDRYGNTSAASIPLAL-DEAI 293 (320)
T ss_pred HHhhHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCC--CHHHhhhhHHhhCcHHHHHHHHHH-HHHH
Confidence 344567889999999999999999988532 44555678899998 3221111222 233333222222 2334
Q ss_pred HhCC-CCCCEEEEEEe
Q 012253 136 ESAS-WDGRYGLVVCT 150 (467)
Q Consensus 136 ~a~~-~~~~~aLVV~s 150 (467)
+.+. .+|+++|+++.
T Consensus 294 ~~~~~~~G~~vll~~~ 309 (320)
T cd00830 294 EEGKLKKGDLVLLLGF 309 (320)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 5543 26788888764
No 192
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=75.94 E-value=9 Score=39.59 Aligned_cols=80 Identities=9% Similarity=0.011 Sum_probs=48.1
Q ss_pred eeehhHHhhhhCCCcCeeEEeccceEeec-cCCCCCHHH--HHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHH
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAF-CSEVEDVIS--MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKT 98 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r~~av-~~~~Ed~~~--ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~ 98 (467)
.|..++.++..+.++..+..|.++..-.. .....+... -...|++++|+++|++|+|||.+.+--. ......
T Consensus 217 vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~-----ft~~~l 291 (385)
T PRK12578 217 IFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDA-----FTIAEI 291 (385)
T ss_pred EEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCc-----ChHHHH
Confidence 46667777777754433334666542100 011222233 3457999999999999999999876422 224444
Q ss_pred HHHHHhcc
Q 012253 99 FLMQIFEK 106 (467)
Q Consensus 99 ~v~~~Lgl 106 (467)
...+.||+
T Consensus 292 ~~le~lGl 299 (385)
T PRK12578 292 MGYEDLGF 299 (385)
T ss_pred HHHHHcCC
Confidence 56667776
No 193
>PRK07937 lipid-transfer protein; Provisional
Probab=75.65 E-value=26 Score=35.87 Aligned_cols=79 Identities=8% Similarity=-0.079 Sum_probs=43.6
Q ss_pred eeehhHHhhhhCCCcCeeEEeccceEeeccCCCCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEEeccCCCCCCcHHHHH
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~-agi~~~~Id~Li~~Tes~~~~~ps~a~~v 100 (467)
.|..+|.++..+..|-++ .|.+...-.......|.. ...++++++++ +|++|+|||.+.+- |..+......
T Consensus 212 vl~s~~~A~~l~~~pv~I-~g~~~~~~~~~~~~~d~~--~~~~~~~a~~~aAgi~~~diD~~Ei~-----D~F~~~~l~~ 283 (352)
T PRK07937 212 VLAAGDRARELRERPAWI-TGIEHRIESPSLGARDLT--RSPSTALAAEAATGGDAGGVDVAELH-----APFTHQELIL 283 (352)
T ss_pred EEecHHHHHHcCCCcEEE-EEEEEeeCCccccccccc--cHHHHHHHHHHhcCCCHHHCCEEEEe-----CCChHHHHHH
Confidence 466677777766666444 355443110000111211 12334455555 59999999999874 2234445567
Q ss_pred HHHhcccC
Q 012253 101 MQIFEKYG 108 (467)
Q Consensus 101 ~~~Lgl~G 108 (467)
.+.||+.|
T Consensus 284 ~e~lGl~g 291 (352)
T PRK07937 284 REALGLGD 291 (352)
T ss_pred HHHcCCCC
Confidence 78888744
No 194
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=74.42 E-value=20 Score=37.76 Aligned_cols=60 Identities=7% Similarity=0.047 Sum_probs=36.0
Q ss_pred eeehhHHhhhhCCCcC-eeEEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEE
Q 012253 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~-k~~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~ 85 (467)
.|..++.++..+..|- ++ .|.+... . .+.++...-...|++++|+++|++++|||.+.+-
T Consensus 277 il~se~~A~~l~~~p~~~i-~~~~~~~--~-~~~~~~~~~~~~a~~~al~~Agl~~~Did~~Ei~ 337 (430)
T TIGR02446 277 ILMREGRAKELGMEPLGYI-RSYAFTA--I-DVWQDMLMGPSYATPLALQRAGLALSDLTLIDMH 337 (430)
T ss_pred EEecHHHHHHcCCCceEEE-EEEEeec--c-CchHhhcccHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 3555666666665553 33 2444332 1 1111111122479999999999999999999873
No 195
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=74.39 E-value=13 Score=38.55 Aligned_cols=77 Identities=10% Similarity=0.070 Sum_probs=48.2
Q ss_pred eeehhHHhhhhCCCcCeeEEeccceE--eeccCCCCCHHHHHH--HHHHHHHHHcCCC--cCCcCEEEEEeccCCCCCCc
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQDC--MAFCSEVEDVISMSL--TVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKS 95 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r~--~av~~~~Ed~~~ma~--~Aa~~aL~~agi~--~~~Id~Li~~Tes~~~~~ps 95 (467)
.|..++.++..+.+|-++ .|+++.. ..+ ..++...+.. .|++++++++|++ ++|||.+.+- |....
T Consensus 218 vl~s~~~a~~l~~~pv~I-~g~g~~~~~~~~--~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~-----D~Ft~ 289 (385)
T PRK06066 218 VLASEEVAKKLTDDPVWI-KGIGWSTESSNL--ETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVD-----DRYSY 289 (385)
T ss_pred EEeCHHHHHhcCCCCEEE-EEEEEecCCccc--ccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEe-----cCChH
Confidence 466677777666666554 4555432 121 1233333333 7999999999997 6999999874 23334
Q ss_pred HHHHHHHHhcc
Q 012253 96 IKTFLMQIFEK 106 (467)
Q Consensus 96 ~a~~v~~~Lgl 106 (467)
......+.||+
T Consensus 290 ~~l~~~e~lG~ 300 (385)
T PRK06066 290 KELQHIEALRL 300 (385)
T ss_pred HHHHHHHHcCC
Confidence 44566677776
No 196
>PRK06059 lipid-transfer protein; Provisional
Probab=73.21 E-value=32 Score=35.70 Aligned_cols=40 Identities=13% Similarity=0.094 Sum_probs=28.9
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcc
Q 012253 62 LTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 62 ~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
..|++++++++|++++|||.+.+--. .........+.||+
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~d~-----f~~~~l~~~e~lGl 315 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVYDL-----STALELDWYEHLGL 315 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeeccc-----ChHHHHHHHHHcCC
Confidence 47899999999999999999987422 12223334477776
No 197
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=72.75 E-value=11 Score=37.61 Aligned_cols=83 Identities=20% Similarity=0.154 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCC-Cee-EE-eeCC-cChHHHHHHHHHHH
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIE-GV-DSTN-ACYGGTAALFNCVN 133 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~-~~~-~~-di~~-aC~gg~~AL~~A~~ 133 (467)
.....++.+++|+++|++++||+.+++.. ..+.+-..+.+.||+ +. +.. .+ ++.| +|++-..+|..
T Consensus 218 ~~~~~~~~~~~l~~~g~~~~di~~~~~h~-----~~~~~~~~~~~~lgi--~~~k~~~~~~~~Gn~~sas~~~~L~~--- 287 (318)
T TIGR00747 218 VRKMGDVVEETLEANGLDPEDIDWFVPHQ-----ANLRIIEALAKRLEL--DMSQVVKTVHKYGNTSAASIPLALDE--- 287 (318)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHcCC--CHHHeeehHhhhCCHHHHHHHHHHHH---
Confidence 34456778899999999999999999743 244566688999998 32 222 11 1122 33333344433
Q ss_pred HHHhCC-CCCCEEEEEEe
Q 012253 134 WVESAS-WDGRYGLVVCT 150 (467)
Q Consensus 134 ~l~a~~-~~~~~aLVV~s 150 (467)
+++.+. .+|+++|+++.
T Consensus 288 ~~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 288 LLRTGRIKPGDLLLLVAF 305 (318)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 344442 26788888763
No 198
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=72.71 E-value=6.7 Score=40.52 Aligned_cols=97 Identities=11% Similarity=0.005 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCC--e--------eEE-eeCC-cChHHHH
Q 012253 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD--I--------EGV-DSTN-ACYGGTA 126 (467)
Q Consensus 59 ~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~--~--------~~~-di~~-aC~gg~~ 126 (467)
....++.+++|+++|+.++|||.+++..-.+-...++... +.+.++. ... . ... +++| +|++...
T Consensus 205 ~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~~~-~l~~~~~--~~~~~~~~~~~~s~~~~~~~GN~~sas~~l 281 (379)
T TIGR01835 205 NAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKALRH-ILKKNYE--DEDESVQNAYLESIIYNREVGNLYTGSLYL 281 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHHHH-HHhhccc--ccHHHHHHHhhhhhhhhhhcCchHhHHHHH
Confidence 3456778899999999999999999865322222222222 3344443 110 0 011 3333 3344444
Q ss_pred HHHHHHHHHHhC--CCCCCEEEEEEeecccccCCCCCCccccceeEEEecC
Q 012253 127 ALFNCVNWVESA--SWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGP 175 (467)
Q Consensus 127 AL~~A~~~l~a~--~~~~~~aLVV~sD~~~y~~~~~~~t~GdGAvA~Ll~~ 175 (467)
+|..+ ++.+ ..+|+++++++ +|.|++|.+.+-
T Consensus 282 ~L~~~---l~~~~~~~~Gd~ill~s--------------~GsG~~ae~~~~ 315 (379)
T TIGR01835 282 GLASL---LENAFEDTTGDKIGLFS--------------YGSGAVAEFFSG 315 (379)
T ss_pred HHHHH---HHhcccCCCCCEEEEEE--------------ecCCcceeeEEE
Confidence 44433 3332 12678888865 688988877765
No 199
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=72.48 E-value=9.3 Score=38.05 Aligned_cols=82 Identities=13% Similarity=0.009 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC--CcChHHHHHHHHHHHHHHhC
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST--NACYGGTAALFNCVNWVESA 138 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~--~aC~gg~~AL~~A~~~l~a~ 138 (467)
..++.+++|+++|++++|||.+++.. ..+.+-..+.+.||+ +++-....+. ..|.+.. -+..-..+++.+
T Consensus 221 ~~~~i~~~l~~~g~~~~di~~~~~h~-----~~~~~~~~~~~~lg~--~~~~~~~~~~~~Gn~~~a~-~~~~L~~~~~~g 292 (319)
T PRK09352 221 LAKVAREALEAAGLTPEDIDWLVPHQ-----ANLRIIDATAKKLGL--PMEKVVVTVDKYGNTSAAS-IPLALDEAVRDG 292 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCC--CHHHhhhhHHhhCCHHHHH-HHHHHHHHHHcC
Confidence 45688889999999999999999743 244556678889887 3221111221 1232222 222223445554
Q ss_pred C-CCCCEEEEEEe
Q 012253 139 S-WDGRYGLVVCT 150 (467)
Q Consensus 139 ~-~~~~~aLVV~s 150 (467)
. .+|+++|+++.
T Consensus 293 ~~~~Gd~vll~s~ 305 (319)
T PRK09352 293 RIKRGDLVLLEGF 305 (319)
T ss_pred CCCCCCEEEEEEE
Confidence 3 26788888764
No 200
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=71.75 E-value=23 Score=37.19 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLEV 84 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li~ 84 (467)
...|++++|+++|++|+|||.+.+
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei 332 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEI 332 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEe
Confidence 458999999999999999999987
No 201
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=71.29 E-value=12 Score=39.09 Aligned_cols=112 Identities=13% Similarity=0.142 Sum_probs=66.8
Q ss_pred eeehhHHhhhhCCCcCeeEEeccce----EeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcH
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQD----CMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSI 96 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r----~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~ 96 (467)
.+...|.++.+|...=--..|.|.. ++..|.++ -+=+.+|.+.||+++|++|++||.|- ++|.|+.. .+.-
T Consensus 238 VLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~---g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~n-D~~E 313 (412)
T COG0304 238 VLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPD---GEGAIRAMRAALADAGLTPEDIDYINAHGTSTPAN-DKAE 313 (412)
T ss_pred EecChhhHHhCCCceEEEEEEEEecccccccCCCCCC---CchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCc-cHHH
Confidence 3455566666665431112344433 33333321 12234889999999999999999999 67777763 5666
Q ss_pred HHHHHHHhcccCCCCeeEEe---eCCcChHHHHHHHHHHHHHHhC
Q 012253 97 KTFLMQIFEKYGNTDIEGVD---STNACYGGTAALFNCVNWVESA 138 (467)
Q Consensus 97 a~~v~~~Lgl~G~~~~~~~d---i~~aC~gg~~AL~~A~~~l~a~ 138 (467)
+..|.+.||-.+ .+....- +..-|.|+.-++..+..++.-.
T Consensus 314 ~~ai~~vfg~~~-~~~~vsstKs~tGH~lGAaGaveai~~~l~l~ 357 (412)
T COG0304 314 SLAIKRVFGEHA-KSLPVSSTKSLTGHTLGAAGAVEAIISLLALR 357 (412)
T ss_pred HHHHHHHhcccc-cCceeeecccccccChhhHHHHHHHHHHHHHh
Confidence 778888887421 2222222 2345667667777766666544
No 202
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=69.92 E-value=17 Score=37.93 Aligned_cols=41 Identities=10% Similarity=0.056 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcc
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
...|++++++++|++++|||.+.+- |......-.-.+.||+
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~-----D~fa~~~l~~le~lGl 318 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVH-----DCFTPSEYLAIDHIGL 318 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeee-----ccchHHHHHHHHHcCC
Confidence 4579999999999999999999874 2233445566677786
No 203
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=69.67 E-value=24 Score=36.81 Aligned_cols=46 Identities=15% Similarity=0.173 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcc
Q 012253 60 MSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 60 ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
-..++.+++|++++++|+|||.|. ++|.|+.. .+.-...|.+.||.
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~-D~~E~~Ai~~~fg~ 322 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRG-DIAESQATAAVFGA 322 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCC-CHHHHHHHHHHhCC
Confidence 345889999999999999999997 66666543 45666778888763
No 204
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=69.50 E-value=14 Score=38.70 Aligned_cols=59 Identities=12% Similarity=0.111 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC
Q 012253 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (467)
Q Consensus 59 ~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~ 118 (467)
.....|.+++|+++|++|+|||.|. ++|.|+.. .+.-...|.+.||..+.+.+..--+|
T Consensus 278 ~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~-D~~E~~al~~~fg~~~~~~~~v~s~K 337 (414)
T PRK08722 278 SGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAG-DVAEIKGIKRALGEAGSKQVLVSSTK 337 (414)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEccCccCCCC-CHHHHHHHHHHhcccCCCCceeeCcc
Confidence 3456889999999999999999997 56666643 45556778888874211334444444
No 205
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=69.43 E-value=16 Score=30.86 Aligned_cols=25 Identities=28% Similarity=0.232 Sum_probs=16.1
Q ss_pred CCCccccceeccCCchHHHHHHHHH
Q 012253 239 QFSMLDVDYFVFHSPYNKLVQKSFA 263 (467)
Q Consensus 239 ~~~~~d~d~~i~H~p~~k~~~k~~~ 263 (467)
++.++|||++..|....+..+....
T Consensus 39 gi~~~~I~~i~~hg~Gt~~~D~~E~ 63 (119)
T PF02801_consen 39 GISPEDIDYIEAHGTGTPLGDAAEA 63 (119)
T ss_dssp TS-GGGEEEEE----SSHHHHHHHH
T ss_pred ccccccceeeeeeccccccchhhhh
Confidence 6889999999999999887765543
No 206
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=69.20 E-value=9.8 Score=41.34 Aligned_cols=45 Identities=11% Similarity=0.166 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcc
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
..+|.+++|+++|++|+|||.|. +||.|+.. .+.=...|.+.||.
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~g-D~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAG-DLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCC-CHHHHHHHHHHhCC
Confidence 45789999999999999999998 67777653 34445677888774
No 207
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=69.12 E-value=25 Score=36.59 Aligned_cols=79 Identities=11% Similarity=-0.043 Sum_probs=47.5
Q ss_pred eeehhHHhhhhCC-CcCeeEEeccceE---eeccCCCCCHHHH--HHHHHHHHHHHcCCC--cCCcCEEEEEeccCCCCC
Q 012253 22 CVLQEALEVHDGV-SKGKYTVGLGQDC---MAFCSEVEDVISM--SLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKS 93 (467)
Q Consensus 22 ~v~~~el~~~~g~-~~~k~~~Gig~r~---~av~~~~Ed~~~m--a~~Aa~~aL~~agi~--~~~Id~Li~~Tes~~~~~ 93 (467)
.|..++.++..+. ++-+++ |.+... .....++.+...| ...|++++++++|++ ++|||.+.+- |..
T Consensus 224 vl~s~~~A~~l~~~~~v~I~-g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~-----D~F 297 (398)
T PRK06157 224 IVTTPEIARALGKKDPVYVK-ALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVH-----DCF 297 (398)
T ss_pred EEecHHHHHhhCCCCCeEEE-EEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEe-----cCC
Confidence 4666777777665 555553 444331 0000112233333 567999999999997 7999999873 223
Q ss_pred CcHHHHHHHHhcc
Q 012253 94 KSIKTFLMQIFEK 106 (467)
Q Consensus 94 ps~a~~v~~~Lgl 106 (467)
....-...+.||+
T Consensus 298 s~~~l~~~e~lGl 310 (398)
T PRK06157 298 SITELVTMEDLGL 310 (398)
T ss_pred hHHHHHHHHHcCC
Confidence 3445566677776
No 208
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=67.84 E-value=30 Score=35.78 Aligned_cols=79 Identities=10% Similarity=0.113 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCC-----cChHHHHHHHHH
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-----ACYGGTAALFNC 131 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~-----aC~gg~~AL~~A 131 (467)
..-..+|.+++|+++|++|++||.|. ++|.|+.. .+.-...+.+.|+..+ ..+....++. ..+++...|..+
T Consensus 273 ~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~-D~~E~~ai~~~~~~~~-~~~~v~s~K~~~Gh~~~Asg~~~l~~~ 350 (407)
T cd00828 273 GKGIARAIRTALAKAGLSLDDLDVISAHGTSTPAN-DVAESRAIAEVAGALG-APLPVTAQKALFGHSKGAAGALQLIGA 350 (407)
T ss_pred hHHHHHHHHHHHHHcCCCHHHcCEEecccccCccc-cHHHHHHHHHHHhccC-CCceeecccchhccchhhhhHHHHHHH
Confidence 35557889999999999999999998 55655542 4455666777776421 2344444441 233333444444
Q ss_pred HHHHHhC
Q 012253 132 VNWVESA 138 (467)
Q Consensus 132 ~~~l~a~ 138 (467)
...++.+
T Consensus 351 ~~~l~~~ 357 (407)
T cd00828 351 LQSLEHG 357 (407)
T ss_pred HHHHhcC
Confidence 4455554
No 209
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=65.42 E-value=14 Score=36.91 Aligned_cols=29 Identities=14% Similarity=0.255 Sum_probs=20.7
Q ss_pred cCCCCccccceeccCCchHHHHHHHHHhh
Q 012253 237 GRQFSMLDVDYFVFHSPYNKLVQKSFARL 265 (467)
Q Consensus 237 ~~~~~~~d~d~~i~H~p~~k~~~k~~~~l 265 (467)
.+|+..+|||+|=..-.|..-.--..++|
T Consensus 332 ~aGL~v~did~FEINEAFAsQ~~yc~~KL 360 (435)
T KOG1389|consen 332 AAGLEVDDIDLFEINEAFASQALYCRNKL 360 (435)
T ss_pred HcCCcccccceeehhHHHHHHHHHHHHHh
Confidence 35799999999988777765544445555
No 210
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=65.22 E-value=37 Score=35.13 Aligned_cols=80 Identities=10% Similarity=0.023 Sum_probs=47.2
Q ss_pred eeehhHHhhhhCCCcCeeEEeccceE--eeccCCCCCHHHHHHHHHHHHHHHcCCC--cCCcCEEEEEeccCCCCCCcHH
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQDC--MAFCSEVEDVISMSLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKSIK 97 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r~--~av~~~~Ed~~~ma~~Aa~~aL~~agi~--~~~Id~Li~~Tes~~~~~ps~a 97 (467)
.|..+|.++..+.++-.+..|.+... ..+...+.........|++++++++|++ ++|||.+.+-.+ .+..-
T Consensus 216 vl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~-----F~~~~ 290 (386)
T PRK08313 216 VIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVP-----FSWFE 290 (386)
T ss_pred EEecHHHHHhcCCCCCeEEEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccC-----ChHHH
Confidence 46667777766666653334665432 1111111122344558999999999997 699999887432 22333
Q ss_pred HHHHHHhcc
Q 012253 98 TFLMQIFEK 106 (467)
Q Consensus 98 ~~v~~~Lgl 106 (467)
-...+.||+
T Consensus 291 ~~~~e~lGl 299 (386)
T PRK08313 291 PMWLENLGF 299 (386)
T ss_pred HHHHHHcCC
Confidence 445566776
No 211
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=64.57 E-value=17 Score=37.82 Aligned_cols=71 Identities=8% Similarity=-0.071 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcccCCCCeeEE-eeCCcChHHHHHHHHHHHHHH
Q 012253 60 MSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV-DSTNACYGGTAALFNCVNWVE 136 (467)
Q Consensus 60 ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~-di~~aC~gg~~AL~~A~~~l~ 136 (467)
-..+|.+++|+++|+ ++|||.|. ++|.|+.. ...=...|.+.|+. + +.+. .+..-|.+..-++..+...+.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~-D~~E~~Ai~~~f~~---p-vsS~Ks~~GH~l~AAGa~e~i~~~la 353 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPA-TAEEKAALEAALAG---P-VRGIGTLFGHTMEAQFPLGLALAALS 353 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCc-cHHHHHHHHHHcCC---C-ccccchhhccchHHHHHHHHHHHHHH
Confidence 346899999999999 89999988 56666642 34445667777663 2 1111 122345555555555554443
No 212
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=63.28 E-value=11 Score=39.25 Aligned_cols=79 Identities=10% Similarity=0.004 Sum_probs=47.0
Q ss_pred eeehhHHhhhhCCCcCeeEEeccceEeeccCCCCC-HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHH
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVED-VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r~~av~~~~Ed-~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v 100 (467)
.|..++.++..+.++-++ .|.++..-.......+ .......|++++++++|++|+|||.+.+-.+. +...-..
T Consensus 218 vl~s~~~A~~l~~~~v~I-~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~F-----s~~~~~~ 291 (388)
T PRK08142 218 VVVRPEIARSLKRPLVKV-LGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSF-----TITVLMQ 291 (388)
T ss_pred EEecHHHHhhcCCCCEEE-EEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccc-----hHHHHHH
Confidence 466777777666444444 3555432111111222 23445689999999999999999998874332 2233344
Q ss_pred HHHhcc
Q 012253 101 MQIFEK 106 (467)
Q Consensus 101 ~~~Lgl 106 (467)
.+.||+
T Consensus 292 ~E~lGl 297 (388)
T PRK08142 292 LEDLGF 297 (388)
T ss_pred HHHcCC
Confidence 567776
No 213
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=62.43 E-value=34 Score=35.39 Aligned_cols=79 Identities=11% Similarity=0.046 Sum_probs=45.4
Q ss_pred eeehhHHhhhhCCCcCeeEEeccceEeecc-CCCCCH--HHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHH
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFC-SEVEDV--ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKT 98 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r~~av~-~~~Ed~--~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~ 98 (467)
.+..++.++.++..+-++ .|.+...-... ....+. ..-...|++++|+++|++++|||.+..--... ....
T Consensus 219 vL~s~~~A~~~~~~~v~I-~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~ 292 (389)
T PRK06064 219 ILASEEKAKEYTDTPVWI-KASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEI 292 (389)
T ss_pred EEecHHHHHHhcCCCeEE-EEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHH
Confidence 355566666665444433 46655431110 011121 22345799999999999999999998632211 2344
Q ss_pred HHHHHhcc
Q 012253 99 FLMQIFEK 106 (467)
Q Consensus 99 ~v~~~Lgl 106 (467)
...+.||+
T Consensus 293 ~~~e~lgl 300 (389)
T PRK06064 293 LAYEDLGF 300 (389)
T ss_pred HHHHHcCC
Confidence 55667776
No 214
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=62.36 E-value=40 Score=34.65 Aligned_cols=80 Identities=9% Similarity=0.148 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcccCCCCeeEEee----CC-cChHHHHHHHHHH
Q 012253 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS----TN-ACYGGTAALFNCV 132 (467)
Q Consensus 59 ~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di----~~-aC~gg~~AL~~A~ 132 (467)
.-..++++++|++++++++|||.|+ .+|.|+.. .+.-...|.+.++.. ...+..--. ++ .+++|+..|..+.
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~-d~~E~~al~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~ 352 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLN-DAAESKAIKRVFGEH-AKKVPVSSTKSMTGHLLGAAGAVEAIATL 352 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCccc-cHHHHHHHHHHhccc-CCCCceeCcchhhccchhhhhHHHHHHHH
Confidence 4455789999999999999999998 45555532 344455666766531 122322222 22 5666777777777
Q ss_pred HHHHhCCC
Q 012253 133 NWVESASW 140 (467)
Q Consensus 133 ~~l~a~~~ 140 (467)
..++.+..
T Consensus 353 ~~l~~~~i 360 (406)
T cd00834 353 LALRDGVL 360 (406)
T ss_pred HHHhcCCc
Confidence 77877754
No 215
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=61.38 E-value=57 Score=33.89 Aligned_cols=78 Identities=6% Similarity=0.004 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC----C-cChHHHHHHHHH
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST----N-ACYGGTAALFNC 131 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~----~-aC~gg~~AL~~A 131 (467)
..-..+|.+++|+++|++|++||.|. .+|.|+.. .+.-...|.+.||. ..+..-.+| + -+++|...|..+
T Consensus 269 ~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~-D~~E~~al~~~fg~---~~~pv~s~K~~~Gh~~~aaG~~~l~~~ 344 (399)
T cd00832 269 PPGLARAIRLALADAGLTPEDVDVVFADAAGVPEL-DRAEAAALAAVFGP---RGVPVTAPKTMTGRLYAGGAPLDVATA 344 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCC-CHHHHHHHHHHhCC---CCCceeCCCchhcchHHHHHHHHHHHH
Confidence 34456889999999999999999988 56666542 45556678888774 223322222 1 233444444445
Q ss_pred HHHHHhCC
Q 012253 132 VNWVESAS 139 (467)
Q Consensus 132 ~~~l~a~~ 139 (467)
...|+.+.
T Consensus 345 ~l~l~~~~ 352 (399)
T cd00832 345 LLALRDGV 352 (399)
T ss_pred HHHHhCCC
Confidence 55566553
No 216
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=60.84 E-value=26 Score=36.38 Aligned_cols=30 Identities=13% Similarity=0.090 Sum_probs=25.2
Q ss_pred cCCCCccccceeccCCchHHHHHHHHHhhh
Q 012253 237 GRQFSMLDVDYFVFHSPYNKLVQKSFARLF 266 (467)
Q Consensus 237 ~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~ 266 (467)
.++++++|||.+=+|-+|.-+..-.++.|.
T Consensus 281 ~Agi~~~DID~~Ei~d~Fa~~~l~~~e~lg 310 (393)
T cd00826 281 KAGLGIGDLDLIEAHDAFAANACATNEALG 310 (393)
T ss_pred HcCCCHHHcCeeehhhhhHHHHHHHHHHhC
Confidence 347899999999999999988777777774
No 217
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=59.30 E-value=60 Score=34.15 Aligned_cols=47 Identities=13% Similarity=0.237 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcc
Q 012253 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 59 ~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
.-...|++++|+++|++|+|||.|. ++|.|+.. .+.-...+.+.|+-
T Consensus 299 ~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~-D~~E~~ai~~~~~~ 346 (437)
T PLN02836 299 RGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLG-DAVEARAIKTVFSE 346 (437)
T ss_pred HHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCc-CHHHHHHHHHHhcc
Confidence 3356789999999999999999998 56666542 34445567777664
No 218
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=59.30 E-value=47 Score=33.89 Aligned_cols=43 Identities=9% Similarity=-0.007 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcc
Q 012253 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 59 ~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
.-...|++++|+++|++++|||.+.+-.. .+...-...+.||+
T Consensus 251 ~~~~~a~~~al~~Agl~~~did~~ei~d~-----F~~~~l~~~e~lGl 293 (375)
T cd00829 251 DAARLAARRAYKMAGITPDDIDVAELYDC-----FTIAELLALEDLGF 293 (375)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCc-----ChHHHHHHHHHcCC
Confidence 44458999999999999999999987432 23344556666776
No 219
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=58.80 E-value=21 Score=36.85 Aligned_cols=45 Identities=16% Similarity=0.341 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcc
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
..+|++++|+++|++|+|||.+. ++|.|+.. .+.-...+.+.|+.
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~-D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLG-DKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCC-CHHHHHHHHHHhcc
Confidence 55889999999999999999998 56666542 45556677788764
No 220
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=58.64 E-value=32 Score=35.61 Aligned_cols=77 Identities=12% Similarity=0.155 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcccCCCCeeEE--eeCC-cChHHHHHHHHHHHHHH
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV--DSTN-ACYGGTAALFNCVNWVE 136 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~--di~~-aC~gg~~AL~~A~~~l~ 136 (467)
..+|.+++|+++|++|+|||.+. ++|.|+.. .+.-...|.+.||. ...+.+. -+.+ .+++|+..|..+...++
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~-D~~E~~al~~~f~~--~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~ 338 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLN-DAMESRAVAAVFGD--GVPCSSTKGLTGHTLGAAGAVEAAICWLALR 338 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCC-CHHHHHHHHHHhCC--CCceeCCCcccccChhhcchHHHHHHHHHHh
Confidence 35899999999999999999988 56666542 34445667777763 2112111 1222 34445555555555566
Q ss_pred hCCC
Q 012253 137 SASW 140 (467)
Q Consensus 137 a~~~ 140 (467)
.+..
T Consensus 339 ~~~i 342 (392)
T PRK09185 339 HGLP 342 (392)
T ss_pred cCCC
Confidence 5543
No 221
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=58.29 E-value=45 Score=34.50 Aligned_cols=46 Identities=13% Similarity=0.358 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhc
Q 012253 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFE 105 (467)
Q Consensus 59 ~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lg 105 (467)
....+|.+++|+++|++|+|||.|. ++|.|+.. .+.-...|++.|+
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~-D~~E~~al~~~fg 300 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLN-DQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCC-cHHHHHHHHHHcC
Confidence 4567999999999999999999998 56666542 3344556677765
No 222
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=58.01 E-value=49 Score=34.83 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHcCCC--cCCcCEEEEEeccCCCCCCcHHHHHHHHhcc
Q 012253 61 SLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 61 a~~Aa~~aL~~agi~--~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
...|++++++++|++ ++|||.+.+--. .....-...+.||+
T Consensus 295 ~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~-----Fa~~~l~~lE~lGl 337 (430)
T PRK06365 295 GRMAAKEAYEMAGITDPLNDLDLIELHDA-----YTSSEIQTYEDLGL 337 (430)
T ss_pred HHHHHHHHHHHcCCCCCHHHCCEEEeecC-----CcHHHHHHHHHcCC
Confidence 457999999999997 799999987422 23334455677776
No 223
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=57.67 E-value=19 Score=36.63 Aligned_cols=83 Identities=13% Similarity=0.074 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHc--CCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCee----EE-eeCC-cChHHHHHHH
Q 012253 58 ISMSLTVVTSLLEKY--KIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIE----GV-DSTN-ACYGGTAALF 129 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~a--gi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~----~~-di~~-aC~gg~~AL~ 129 (467)
.....++++++|+++ |++++|||.+++..- .+.+--.+.+.||+. ..++. .+ +.+| ++++...+|.
T Consensus 258 ~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~-----~~~i~~~v~~~lgl~-~~~~~~s~~~l~~~GN~~sasi~~~L~ 331 (361)
T cd00831 258 EKNLERVLRKLLARLGIGLFKLAFDHWCVHPG-----GRAVLDAVEKALGLS-PEDLEASRMVLRRYGNMSSSSVLYVLA 331 (361)
T ss_pred HHHHHHHHHHHhccccCCCccccceEEEECCC-----ChHHHHHHHHHcCCC-HHHHHHHHHHHHHhCCchhccHHHHHH
Confidence 345556788999999 999999999998542 334455788888871 12221 12 3333 5555555555
Q ss_pred HHHHHHHhCC-CCCCEEEEEE
Q 012253 130 NCVNWVESAS-WDGRYGLVVC 149 (467)
Q Consensus 130 ~A~~~l~a~~-~~~~~aLVV~ 149 (467)
.+ ++.+. .+|+++|+++
T Consensus 332 ~~---~~~g~~~~Gd~vll~~ 349 (361)
T cd00831 332 YM---EAKGRVKRGDRGLLIA 349 (361)
T ss_pred HH---HHhCCCCCCCEEEEEE
Confidence 55 34443 2677888776
No 224
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=57.60 E-value=15 Score=38.72 Aligned_cols=79 Identities=11% Similarity=0.020 Sum_probs=48.4
Q ss_pred eeehhHHhhhhCCCc-----CeeEEeccceEeec--cCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCC
Q 012253 22 CVLQEALEVHDGVSK-----GKYTVGLGQDCMAF--CSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSK 94 (467)
Q Consensus 22 ~v~~~el~~~~g~~~-----~k~~~Gig~r~~av--~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~p 94 (467)
.|..++.++..+.+| -++ .|.++..... .+.+-.....+..|++++++++|++|+|||.+.+-- ...
T Consensus 266 vl~See~A~~l~~~p~~~~~v~i-~g~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~d-----aFa 339 (438)
T PTZ00455 266 VLASEEGLQKMGLSPNDSRLVEI-KSLACASGNLYEDPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHD-----CFT 339 (438)
T ss_pred EEecHHHHHhcCCCCCCCccEEE-EEEEEecCCcccCccccccchHHHHHHHHHHHHcCCCHHHCcEeeecc-----cCh
Confidence 456677777777766 233 3444332100 111112233357899999999999999999998742 233
Q ss_pred cHHHHHHHHhcc
Q 012253 95 SIKTFLMQIFEK 106 (467)
Q Consensus 95 s~a~~v~~~Lgl 106 (467)
...-...+.||+
T Consensus 340 ~~~l~~~e~lGl 351 (438)
T PTZ00455 340 IAELLMYEALGI 351 (438)
T ss_pred HHHHHHHHHcCC
Confidence 445566677776
No 225
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=57.49 E-value=62 Score=27.82 Aligned_cols=27 Identities=15% Similarity=0.201 Sum_probs=19.7
Q ss_pred CCCccccceeccCCchHHHHHHHHHhh
Q 012253 239 QFSMLDVDYFVFHSPYNKLVQKSFARL 265 (467)
Q Consensus 239 ~~~~~d~d~~i~H~p~~k~~~k~~~~l 265 (467)
+++.+|+|.+=+|-+|.-..-...+.|
T Consensus 36 g~~~~did~~Ei~EaFA~~~l~~~~~l 62 (123)
T PF02803_consen 36 GLTPDDIDVIEINEAFAAQVLAFLEAL 62 (123)
T ss_dssp T--GGGESEEEE--SBHHHHHHHHHHH
T ss_pred CCCccccchhhccchhhhHHHHhhccc
Confidence 689999999999999998877777666
No 226
>PRK06158 thiolase; Provisional
Probab=57.37 E-value=17 Score=37.65 Aligned_cols=78 Identities=6% Similarity=0.032 Sum_probs=44.3
Q ss_pred eeehhHHhhhhCCCcCeeEEeccceEe--eccCCCCC-HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHH
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQDCM--AFCSEVED-VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKT 98 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r~~--av~~~~Ed-~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~ 98 (467)
.|..++.++..+.++-++ .|.+...- .+. ...+ ...-...|++++++++|++|+|||.+.+--+ .+..--
T Consensus 216 VL~s~e~A~~l~~~~v~i-~g~~~~~~~~~~~-~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~-----Fs~~~l 288 (384)
T PRK06158 216 VMVRADRARDLPRPPVYV-LGAAAATWHRQIS-SMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDA-----FTINTI 288 (384)
T ss_pred EEecHHHHhhcCCCcEEE-EEEEEecCCcccc-cccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCC-----chHHHH
Confidence 355566655555444333 34443311 111 1111 2344568999999999999999999987432 223333
Q ss_pred HHHHHhcc
Q 012253 99 FLMQIFEK 106 (467)
Q Consensus 99 ~v~~~Lgl 106 (467)
...+.||+
T Consensus 289 ~~~E~lG~ 296 (384)
T PRK06158 289 LFLEDLGF 296 (384)
T ss_pred HHHHHcCC
Confidence 44566666
No 227
>PRK09604 UGMP family protein; Validated
Probab=57.27 E-value=38 Score=34.34 Aligned_cols=33 Identities=9% Similarity=0.134 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccC
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETV 89 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~ 89 (467)
-.+......+++|++++++++|||.|.++..-+
T Consensus 51 H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG 83 (332)
T PRK09604 51 HVENIVPLIEEALKEAGLTLEDIDAIAVTAGPG 83 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC
Confidence 356667789999999999999999999965433
No 228
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=56.77 E-value=18 Score=36.57 Aligned_cols=84 Identities=13% Similarity=0.069 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC--CcCh--HHHHHHHHH
Q 012253 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST--NACY--GGTAALFNC 131 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~--~aC~--gg~~AL~~A 131 (467)
-++.+..++.+++|++++++++|||.++.. .....+-..+.++||+ +.+-..+.+. .+++ +-..+|..+
T Consensus 220 ~av~~~~~~~~~~L~~~~l~~~dId~~vpH-----Qan~ri~~~i~~~l~~--~~~k~~~~~~~yGNtsaAsiplaL~~~ 292 (323)
T COG0332 220 FAVRAMPKAIEEVLEKAGLTPEDIDWFVPH-----QANLRIIEAIAKKLGI--PEEKVVVTVDKYGNTSAASIPLALDEA 292 (323)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEccc-----cccHHHHHHHHHHcCC--CHHHHhhHHHHhcccccchHHHHHHHH
Confidence 367888899999999999999999999963 3344556688888887 4433333332 2333 333333333
Q ss_pred HHHHHhCCC-CCCEEEEEE
Q 012253 132 VNWVESASW-DGRYGLVVC 149 (467)
Q Consensus 132 ~~~l~a~~~-~~~~aLVV~ 149 (467)
++.|.. +|..+|+++
T Consensus 293 ---~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 293 ---LREGRIKPGDLVLLEA 308 (323)
T ss_pred ---hhhCCCCCCCEEEEEe
Confidence 444432 455666554
No 229
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=56.59 E-value=27 Score=36.44 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhc
Q 012253 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFE 105 (467)
Q Consensus 59 ~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lg 105 (467)
.-..+|++++|+++|++|+|||.|. ++|.|+.. .+.-...+.+.||
T Consensus 288 ~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~-D~~E~~al~~~fg 334 (424)
T PRK06333 288 EGARRAMLIALRQAGIPPEEVQHLNAHATSTPVG-DLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccc-hHHHHHHHHHHhC
Confidence 3456889999999999999999998 56666542 3344567777776
No 230
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=55.53 E-value=39 Score=35.36 Aligned_cols=47 Identities=13% Similarity=0.159 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHH-cCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcc
Q 012253 59 SMSLTVVTSLLEK-YKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 59 ~ma~~Aa~~aL~~-agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
.-..+|++++|++ +|++|+|||.|. ++|.|+.. .+.-...+.+.||.
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~-D~~E~~al~~~~~~ 331 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATSTPIG-DKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCC-CHHHHHHHHHHhcc
Confidence 4456899999999 999999999998 56655432 23334457777764
No 231
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=54.94 E-value=91 Score=32.14 Aligned_cols=82 Identities=16% Similarity=0.160 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcccCC--CCeeEEeeC----C-cChHHHHHHH
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGN--TDIEGVDST----N-ACYGGTAALF 129 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl~G~--~~~~~~di~----~-aC~gg~~AL~ 129 (467)
..-...|++++|+++|++++|||.+. ++|.|+.- .+.-...|...|+..+. ..+..-.++ + -.++++..|.
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~-D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~ 356 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLG-DPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLI 356 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCC-CHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHH
Confidence 44556899999999999999999998 45555432 33444566777654210 122222232 2 2334444455
Q ss_pred HHHHHHHhCCC
Q 012253 130 NCVNWVESASW 140 (467)
Q Consensus 130 ~A~~~l~a~~~ 140 (467)
.+...++.+..
T Consensus 357 ~~~~~l~~~~i 367 (421)
T cd00833 357 KVVLALEHGVI 367 (421)
T ss_pred HHHHHHhcCCc
Confidence 55555665543
No 232
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=54.88 E-value=58 Score=33.66 Aligned_cols=43 Identities=5% Similarity=-0.085 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcc
Q 012253 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 59 ~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
.-...|++++++++|++|+|||.+.+-- ..+.......+.||+
T Consensus 260 ~~~~~a~~~a~~~agl~~~did~~e~~d-----~f~~~~~~~~e~lg~ 302 (389)
T PRK07516 260 EGPRRAWQRALAQAGVTLDDLSFVETHD-----CFTIAELIEYEAMGL 302 (389)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEec-----CCCHHHHHHHHHcCC
Confidence 3345799999999999999999998742 233444566677776
No 233
>PRK07855 lipid-transfer protein; Provisional
Probab=52.85 E-value=20 Score=37.19 Aligned_cols=80 Identities=9% Similarity=-0.028 Sum_probs=45.2
Q ss_pred eeehhHHhhhhCCCcCeeEEeccceEe----ecc-CCCCCHH--HHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCC
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQDCM----AFC-SEVEDVI--SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSK 94 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r~~----av~-~~~Ed~~--~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~p 94 (467)
.|..++.++..+..|-++ .|.++..- .+. ....+.. .....|++++++++|++++|||.+.+--+ .+
T Consensus 223 vl~see~A~~l~~~pv~I-~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~-----Ft 296 (386)
T PRK07855 223 VVTSAERARDLKQRPAVI-KAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDH-----FT 296 (386)
T ss_pred EEecHHHHhhCCCCCEEE-EEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccC-----Cc
Confidence 456666666555445433 45554320 000 0112222 22347999999999999999999976422 22
Q ss_pred cHHHHHHHHhccc
Q 012253 95 SIKTFLMQIFEKY 107 (467)
Q Consensus 95 s~a~~v~~~Lgl~ 107 (467)
...-...+.||+.
T Consensus 297 ~~~l~~~E~lG~~ 309 (386)
T PRK07855 297 PFVLMQLEELGFC 309 (386)
T ss_pred HHHHHHHHHcCCC
Confidence 3344555666663
No 234
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=46.80 E-value=79 Score=32.79 Aligned_cols=48 Identities=17% Similarity=0.272 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcc
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
......|++++|+++|+.++|||.+. ++|.|+. ....-...|...|+.
T Consensus 278 ~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~-~d~~E~~al~~~~~~ 326 (424)
T smart00825 278 GPAQARLIRQALARAGVDPADVDYVEAHGTGTPL-GDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCC-CCHHHHHHHHHHHhc
Confidence 34556789999999999999999998 5666653 233444566777764
No 235
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=46.47 E-value=41 Score=34.95 Aligned_cols=79 Identities=9% Similarity=-0.082 Sum_probs=44.5
Q ss_pred eeehhHHhhhhCCCcCeeEEeccce--EeeccCCCCCHHHHHHHHHHHHHHHcCCCc--CCcCEEEEEeccCCCCCCcHH
Q 012253 22 CVLQEALEVHDGVSKGKYTVGLGQD--CMAFCSEVEDVISMSLTVVTSLLEKYKIDP--TQIGRLEVGSETVIDKSKSIK 97 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~~Gig~r--~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~--~~Id~Li~~Tes~~~~~ps~a 97 (467)
.|..+|.++..+.++-++ .|.+.. .......+.........|++++++++|+++ +|||.+.+--. .+...
T Consensus 224 vl~s~e~A~~l~~~~v~I-~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~-----Fs~~~ 297 (392)
T PRK06065 224 VLASEDLARRYTDTPVWV-EGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDP-----FDYKE 297 (392)
T ss_pred EEeCHHHHHhcCCCCEEE-EEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCC-----ChHHH
Confidence 466677777666666554 345432 111111111112223579999999999985 99999987422 22333
Q ss_pred HHHHHHhcc
Q 012253 98 TFLMQIFEK 106 (467)
Q Consensus 98 ~~v~~~Lgl 106 (467)
....+.||+
T Consensus 298 l~~~E~lG~ 306 (392)
T PRK06065 298 LHHLEGLQL 306 (392)
T ss_pred HHHHHHcCC
Confidence 344455554
No 236
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=45.79 E-value=72 Score=31.85 Aligned_cols=60 Identities=8% Similarity=0.040 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~ 118 (467)
-........+++|++++++++|||.|.++..-+....--++...++.|.. .-+++.+.++
T Consensus 48 H~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~--~~~~p~~~v~ 107 (305)
T TIGR00329 48 HAENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLAL--SLDKPLIGVN 107 (305)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHH--HhCCCEeecc
Confidence 34555677899999999999999999997644433222344444555543 2344455554
No 237
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=43.98 E-value=53 Score=32.14 Aligned_cols=65 Identities=17% Similarity=0.220 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCC-CCeeEEeeCCcChHHHHH
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN-TDIEGVDSTNACYGGTAA 127 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~-~~~~~~di~~aC~gg~~A 127 (467)
.+|...|++++.++.|+.|+||+.|...-+.... --.--+.|||.+- ....-+|-+..-|||-.-
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielhdcfs~n-----elityealglcpegqg~~~vdrgdntyggkwv 336 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSAN-----ELITYEALGLCPEGQGGEFVDRGDNTYGGKWV 336 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEeecccchh-----hhhhHHHhcCCCCCCCceeeecCCCccCceEE
Confidence 5889999999999999999999999875443221 1223356777421 234455666666665433
No 238
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=43.55 E-value=40 Score=35.17 Aligned_cols=29 Identities=17% Similarity=0.423 Sum_probs=24.7
Q ss_pred HHHHHHHHHHcCCCcCCcCEEE-EEeccCC
Q 012253 62 LTVVTSLLEKYKIDPTQIGRLE-VGSETVI 90 (467)
Q Consensus 62 ~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~ 90 (467)
.++++++|+++|++|+|||.|. ++|.|+.
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~hgtgt~~ 313 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPHGTGSPL 313 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccCCCCCC
Confidence 5899999999999999999988 5666653
No 239
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=43.32 E-value=16 Score=34.41 Aligned_cols=44 Identities=27% Similarity=0.348 Sum_probs=29.6
Q ss_pred ccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEeccccceeeEE
Q 012253 327 QVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFS 371 (467)
Q Consensus 327 ~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~syGsG~~~~~~~ 371 (467)
.+|+=.+-|-|...+.+++. -.+++|++|+=++-|||..+..++
T Consensus 48 ~i~~~~~is~P~~~a~~l~~-L~l~pg~~VLeIGtGsGY~aAlla 91 (209)
T PF01135_consen 48 PIGCGQTISAPSMVARMLEA-LDLKPGDRVLEIGTGSGYQAALLA 91 (209)
T ss_dssp EEETTEEE--HHHHHHHHHH-TTC-TT-EEEEES-TTSHHHHHHH
T ss_pred eecceeechHHHHHHHHHHH-HhcCCCCEEEEecCCCcHHHHHHH
Confidence 34555677778888888877 457899999999999998766544
No 240
>PRK08304 stage V sporulation protein AD; Validated
Probab=43.03 E-value=1.4e+02 Score=30.31 Aligned_cols=88 Identities=16% Similarity=0.207 Sum_probs=50.0
Q ss_pred HHHHHHHHHHH---HHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccC------CCC--eeEEee-CC------
Q 012253 58 ISMSLTVVTSL---LEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG------NTD--IEGVDS-TN------ 119 (467)
Q Consensus 58 ~~ma~~Aa~~a---L~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G------~~~--~~~~di-~~------ 119 (467)
.-||-.|+..+ |++.|.+|++-|+|+.|--..+ -...+.++|...| -.+ +.-||. ++
T Consensus 204 aaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg~v-----G~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGg 278 (337)
T PRK08304 204 AAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLGRV-----GREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGG 278 (337)
T ss_pred hhhhHHHHHHHHHHHHHcCCChhhccEEEEcchHHH-----HHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCC
Confidence 45666665544 4677999999999998632222 1223333332211 023 356662 12
Q ss_pred ---cChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 120 ---ACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 120 ---aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
||++-+. --.....++.|.+ |++|+|++-..
T Consensus 279 SGc~csa~v~-~~~~~~~~~~g~~--~rvl~v~tGaL 312 (337)
T PRK08304 279 SGCACSAVVT-YGYLLKELQKGKL--KRVLVVATGAL 312 (337)
T ss_pred cccchhHHHH-HHHHHHHHhcCCc--eEEEEEEchhh
Confidence 3333222 2234466788988 99999998665
No 241
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=41.25 E-value=1e+02 Score=31.81 Aligned_cols=85 Identities=20% Similarity=0.215 Sum_probs=53.5
Q ss_pred hcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhh
Q 012253 236 EGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYD 315 (467)
Q Consensus 236 ~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~ 315 (467)
+.++++++|||++=+|-+|.-+....++.| |+.++..
T Consensus 291 ~~agi~~~did~~e~~d~Fa~~~~~~~e~l------------------------G~~~~pv------------------- 327 (382)
T PRK07801 291 EKTGLSIDDIDVVEINEAFAPVVLAWLKET------------------------GADPAKV------------------- 327 (382)
T ss_pred HHcCCCHHHcCEeeecccchHHHHHHHHHh------------------------CCCchhc-------------------
Confidence 345799999999999999998887777766 3332211
Q ss_pred hhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEe-ccccceee
Q 012253 316 LKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSY-GSGLTATM 369 (467)
Q Consensus 316 ~~~~~s~~~~~~~GN~~taS~~l~L~~~l~~~~~~~~G~~ill~sy-GsG~~~~~ 369 (467)
.++=- .--+||...||-...+.+++.+- + .+|.++++.+- |.|....+
T Consensus 328 ---N~~GG-~l~~Ghp~gasG~~~~~e~~~qL-~-~~~~~~gl~~~~gggg~~~~ 376 (382)
T PRK07801 328 ---NPNGG-AIALGHPLGATGAKLMTTLLHEL-E-RTGGRYGLQTMCEGGGTANV 376 (382)
T ss_pred ---CCCcc-hhhhcCcHHHHHHHHHHHHHHHH-H-hcCCCEEEEEEcccccceeE
Confidence 11110 13579998888877777777661 1 24566676664 43433333
No 242
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=40.88 E-value=39 Score=28.86 Aligned_cols=47 Identities=13% Similarity=0.108 Sum_probs=26.7
Q ss_pred HHHHHHHcCCCcCCcCEEEEEeccCCCC--CCcHHHHHHHHh-cccCCCCeeEEeeC
Q 012253 65 VTSLLEKYKIDPTQIGRLEVGSETVIDK--SKSIKTFLMQIF-EKYGNTDIEGVDST 118 (467)
Q Consensus 65 a~~aL~~agi~~~~Id~Li~~Tes~~~~--~ps~a~~v~~~L-gl~G~~~~~~~di~ 118 (467)
.++++++.+++++||-.++| |.|++-. .|+.+ .+.+ |. .++.-+...
T Consensus 26 l~~i~~~N~l~~~dIvSi~F-T~T~DL~a~fPA~a---~R~~~g~---~~Vpl~c~~ 75 (118)
T PF07736_consen 26 LEEILERNELSPEDIVSIIF-TVTPDLDAAFPAAA---ARELPGW---DDVPLMCAQ 75 (118)
T ss_dssp HHHHHHHTT--GGGEEEEEE-EE-TT--SS-TCHH---HHHTTTG---TTSEEEEEE
T ss_pred HHHHHHHcCCCHHHEEEEEE-EeCCCcCccChHHH---HHccCCC---CccceeccC
Confidence 45556788999999999998 4555422 34433 3444 65 666666554
No 243
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=40.60 E-value=33 Score=34.97 Aligned_cols=83 Identities=17% Similarity=0.249 Sum_probs=49.7
Q ss_pred eeehhHHhhhhCCCcCeeE--Eeccc--eEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcH
Q 012253 22 CVLQEALEVHDGVSKGKYT--VGLGQ--DCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSI 96 (467)
Q Consensus 22 ~v~~~el~~~~g~~~~k~~--~Gig~--r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~ 96 (467)
.+-+|+|+.+..-...-|. .|-|. .-..+..|+.|- .=|+.|.+++|+++|+.|+|||.|= ++|.|+.. ...-
T Consensus 261 vlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG-~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~G-D~aE 338 (440)
T KOG1394|consen 261 VLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDG-AGAVLAMERALKDAGLSPEDIDYVNAHATSTPLG-DAAE 338 (440)
T ss_pred EEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCc-chHHHHHHHHHHHcCCChhhcCeeecccccCcCc-hHHH
Confidence 4557777766322222221 23332 222333344332 2234567788999999999999998 78888864 3455
Q ss_pred HHHHHHHhcc
Q 012253 97 KTFLMQIFEK 106 (467)
Q Consensus 97 a~~v~~~Lgl 106 (467)
+..|.+.|+.
T Consensus 339 ~~Ai~~vf~~ 348 (440)
T KOG1394|consen 339 AEAIKRVFGE 348 (440)
T ss_pred HHHHHHHhcc
Confidence 6678888775
No 244
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=39.44 E-value=1e+02 Score=30.99 Aligned_cols=60 Identities=5% Similarity=0.018 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~ 118 (467)
-.+......+++|+++++++++||.|.+++.-+....=-++..+++-|.. .-+++.+-+.
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~--~~~~p~~~v~ 108 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALAL--ALNKPLIGVN 108 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHH--HhCCCEEecc
Confidence 45566678899999999999999999997644432222234445555543 2334455554
No 245
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=37.67 E-value=1e+02 Score=30.54 Aligned_cols=86 Identities=14% Similarity=0.034 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCee-----EE-eeCC-cChHHHHHH
Q 012253 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIE-----GV-DSTN-ACYGGTAAL 128 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~-----~~-di~~-aC~gg~~AL 128 (467)
.......++++++|++.+++ ++|+.++...-+. +.+-..+.+.|++. ..++. .+ +++| +|+....+|
T Consensus 220 ~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~----~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~Gn~~sa~~~~~L 293 (324)
T cd00827 220 AAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG----KKILEAVAKKLGGP-PEKASQTRWILLRRVGNMYAASILLGL 293 (324)
T ss_pred HHhHHHHHHHHHHHHHcccc-cccceeeccCchH----HHHHHHHHHHccch-HhhhccchhhHHHHhCchHHHHHHHHH
Confidence 34566778889999999999 9999888743222 15566778888761 11222 12 2333 455555555
Q ss_pred HHHHHHHHhCC-CCCCEEEEEEe
Q 012253 129 FNCVNWVESAS-WDGRYGLVVCT 150 (467)
Q Consensus 129 ~~A~~~l~a~~-~~~~~aLVV~s 150 (467)
..+ ++.+. .+|+++|+++.
T Consensus 294 ~~~---~~~~~~~~Gd~vl~~~~ 313 (324)
T cd00827 294 ASL---LESGKLKAGDRVLLFSY 313 (324)
T ss_pred HHH---HhcCCCCCCCEEEEEEe
Confidence 544 33332 25788888874
No 246
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=36.96 E-value=51 Score=34.54 Aligned_cols=45 Identities=20% Similarity=0.260 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcc
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
..+|.+++|++++++|+|||.+. ++|.|+. ..+.-...|.+.++.
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~-~d~~E~~al~~~~~~ 336 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPE-NDKMEYLGLSAVFGE 336 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcc-hHHHHHHHHHHHhcc
Confidence 45889999999999999999998 4555553 334445556666653
No 247
>cd01458 vWA_ku Ku70/Ku80 N-terminal domain. The Ku78 heterodimer (composed of Ku70 and Ku80) contributes to genomic integrity through its ability to bind DNA double-strand breaks (DSB) in a preferred orientation. DSB's are repaired by either homologues recombination or non-homologues end joining and facilitate repair by the non-homologous end-joining pathway (NHEJ). The Ku heterodimer is required for accurate process that tends to preserve the sequence at the junction. Ku78 is found in all three kingdoms of life. However, only the eukaryotic proteins have a vWA domain fused to them at their N-termini. The vWA domain is not involved in DNA binding but may very likey mediate Ku78's interactions with other proteins. Members of this subgroup lack the conserved MIDAS motif.
Probab=34.11 E-value=2.5e+02 Score=26.17 Aligned_cols=96 Identities=11% Similarity=0.123 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHHHHHHc--CCCcCCcCEEEEEeccCCC------------CCCcHHHHHHHHhcccCCCCeeEEee---
Q 012253 55 EDVISMSLTVVTSLLEKY--KIDPTQIGRLEVGSETVID------------KSKSIKTFLMQIFEKYGNTDIEGVDS--- 117 (467)
Q Consensus 55 Ed~~~ma~~Aa~~aL~~a--gi~~~~Id~Li~~Tes~~~------------~~ps~a~~v~~~Lgl~G~~~~~~~di--- 117 (467)
.+..++|.+++.+++++- .-+-+.|++++++|+.... ........|...+.+. .+....+..
T Consensus 23 ~s~l~~a~~~i~~~~~~ki~~~~~D~vGlilf~t~~~~~~~~~~~i~v~~~l~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 101 (218)
T cd01458 23 ESPFEEALKCIRQLMKSKIISSPKDLVGVVFYGTEESKNPVGYENIYVLLDLDTPGAERVEDLKELI-EPGGLSFAGQVG 101 (218)
T ss_pred CChHHHHHHHHHHHHHhceeCCCCCeEEEEEEcccCCCCcCCCCceEEeecCCCCCHHHHHHHHHHh-hcchhhhcccCC
Confidence 578899999999999862 2334679999999974111 1123345566665542 111111111
Q ss_pred CCcChHHHHHHHHHHHHHHhCCC-CCCEEEEEEee
Q 012253 118 TNACYGGTAALFNCVNWVESASW-DGRYGLVVCTD 151 (467)
Q Consensus 118 ~~aC~gg~~AL~~A~~~l~a~~~-~~~~aLVV~sD 151 (467)
.........||..|..++..+.. ...+.+|+-+|
T Consensus 102 ~~~~~~l~~aL~~a~~~~~~~~~~~~~k~IvL~TD 136 (218)
T cd01458 102 DSGQVSLSDALWVCLDLFSKGKKKKSHKRIFLFTN 136 (218)
T ss_pred CCCCccHHHHHHHHHHHHHhccccccccEEEEECC
Confidence 12456678999999999986210 12466666665
No 248
>PLN03172 chalcone synthase family protein; Provisional
Probab=33.72 E-value=1.9e+02 Score=30.00 Aligned_cols=35 Identities=6% Similarity=-0.008 Sum_probs=21.1
Q ss_pred HHHHH-HHHHHHHHHHHHHHhhhcCCCCccccceeccCC
Q 012253 215 TCYLM-ALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHS 252 (467)
Q Consensus 215 ~~y~~-a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~ 252 (467)
+.|.+ +.+-+.+..++.+ +++++..+|||++|+..
T Consensus 96 ~~~~~~a~~La~~Aa~~aL---~~ag~~~~dId~ii~~t 131 (393)
T PLN03172 96 DMVVVEVPKLGKEAAAKAI---KEWGQPKSKITHLVFCT 131 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHcCCCHHHCCEEEEEc
Confidence 34544 3333444444433 56789999999987544
No 249
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=32.90 E-value=80 Score=30.00 Aligned_cols=63 Identities=10% Similarity=0.059 Sum_probs=44.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC
Q 012253 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (467)
Q Consensus 54 ~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~ 118 (467)
...-.+.....++.+|.++++.++|||.|.|+..-+.+..=-++.-+++-|.+ .-+++.+-++
T Consensus 34 ~r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~--~l~iplvgvs 96 (220)
T COG1214 34 KRNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLAL--ALNIPLVGVS 96 (220)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHH--HcCCCEEEeC
Confidence 34566778889999999999999999999996544433333345555555665 4556666664
No 250
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=32.16 E-value=1e+02 Score=31.18 Aligned_cols=82 Identities=20% Similarity=0.349 Sum_probs=50.6
Q ss_pred hcCCCCccccceeccCCchHHHHHHHHHhhhhhhhccccCchhhHHhhhcCCCCCCCcchhhhhhhHHHHHHHHHHHHhh
Q 012253 236 EGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYD 315 (467)
Q Consensus 236 ~~~~~~~~d~d~~i~H~p~~k~~~k~~~~l~~~~~~~~~~~~~~~~~~~l~~~~g~~~e~~~~~~~~~k~~~~~~~~~~~ 315 (467)
.++|+..+|+|+|=+.-.|.-.+..-.+.| ++++++.. +
T Consensus 305 k~aG~~~sdVd~~EiNEAFs~v~lA~iK~L------------------------gldP~kVN-----------v------ 343 (396)
T KOG1390|consen 305 KKAGLEQSDVDYWEINEAFSVVVLANIKKL------------------------GLDPSKVN-----------V------ 343 (396)
T ss_pred HHcCcchhhhhHHhhhhhhhHHHHHHHHHh------------------------CCCHhhcc-----------C------
Confidence 345799999999988877766655555544 67766431 1
Q ss_pred hhcCCCcccccccCc---cccchHHHHHHHHHhhcCcCCCCCEEEEEE--eccccceee
Q 012253 316 LKVQPSTLIPKQVGN---MYTASLYAAFASLLHEKHSSLEGKRVIMFS--YGSGLTATM 369 (467)
Q Consensus 316 ~~~~~s~~~~~~~GN---~~taS~~l~L~~~l~~~~~~~~G~~ill~s--yGsG~~~~~ 369 (467)
.-+ .--+|| |+.+.+...|.+.|++ .|.++++.+ -|.|..+++
T Consensus 344 ---~GG---AValGHPlG~SGaRi~~tL~~~L~~-----~~g~~GvAaiCnGGGgasa~ 391 (396)
T KOG1390|consen 344 ---HGG---AVALGHPLGMSGARILVTLLHTLEQ-----KGGKIGVAAICNGGGGASAM 391 (396)
T ss_pred ---CCc---eeecCCCcCCcchhHHHHHHHHHHh-----hCCceeEEEEecCCCceeeE
Confidence 000 012344 5667889999998887 344555555 466665544
No 251
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=32.07 E-value=74 Score=27.13 Aligned_cols=50 Identities=14% Similarity=0.101 Sum_probs=30.7
Q ss_pred HHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHh-cccCCCCeeEEeeCC
Q 012253 65 VTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIF-EKYGNTDIEGVDSTN 119 (467)
Q Consensus 65 a~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~L-gl~G~~~~~~~di~~ 119 (467)
...++++.+++++||-.++|. .|++-. ...-+..++.+ |. .++.-++..+
T Consensus 26 l~~ii~~N~l~~edivSv~FT-~T~DL~-a~FPA~aaR~~~Gw---~~Vplmc~qE 76 (117)
T TIGR01796 26 LTELMERNELTPEDLISVIFT-VTEDLH-ADFPAAAARGLPGW---TDVPVMCAQE 76 (117)
T ss_pred HHHHHHHcCCCHHHEEEEEEE-ecCccc-ccChHHHHHhccCC---CCcceeccCc
Confidence 345557889999999999984 455321 12233445555 65 6666665543
No 252
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=31.01 E-value=1.4e+02 Score=30.35 Aligned_cols=44 Identities=11% Similarity=0.095 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcc
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl 106 (467)
......+++++|+++|++++|||.+++.- ..+.+--.+.+.||+
T Consensus 241 ~~~~~~~i~~~L~~~gl~~~did~~v~HQ-----~~~~i~~~i~~~Lgl 284 (353)
T PRK12880 241 LECEPKSFKEILEFSKVDEKDIAFHLFHQ-----SNAYLVDCIKEELKL 284 (353)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCC
Confidence 33445678899999999999999999842 344556689999998
No 253
>PLN03169 chalcone synthase family protein; Provisional
Probab=30.39 E-value=1.4e+02 Score=30.95 Aligned_cols=80 Identities=16% Similarity=0.118 Sum_probs=47.2
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCC-ee----EE-eeCC-cChHHHHHHHHHHHH
Q 012253 62 LTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IE----GV-DSTN-ACYGGTAALFNCVNW 134 (467)
Q Consensus 62 ~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~-~~----~~-di~~-aC~gg~~AL~~A~~~ 134 (467)
...++++|+++|++++|||.+.+.- ....+.+--.+++.||+ +++ +. .+ +.+| ++++-..+|..+.
T Consensus 284 ~~~i~~~L~~~gl~~~did~~~~v~---Hq~n~~il~~v~~~Lgl--~~ek~~~s~~~l~~~GNtsSasip~~L~~~~-- 356 (391)
T PLN03169 284 EGFCKKLMKKAGLVEKDYNDLFWAV---HPGGPAILNRLEKKLKL--APEKLECSRRALMDYGNVSSNTIVYVLEYMR-- 356 (391)
T ss_pred HHHHHHHHHHcCCCCCCCCcceEEe---cCCCHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCCchHhHHHHHHHHHH--
Confidence 3456888999999999999443321 12235667788999998 332 22 12 4444 6666666776553
Q ss_pred HHhCCC----CCCEEEEEE
Q 012253 135 VESASW----DGRYGLVVC 149 (467)
Q Consensus 135 l~a~~~----~~~~aLVV~ 149 (467)
+.+.. +|+++|.++
T Consensus 357 -~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 357 -EELKKKGEEDEEWGLILA 374 (391)
T ss_pred -HhhcccCCCCCcEEEEEE
Confidence 33221 346666665
No 254
>PRK14878 UGMP family protein; Provisional
Probab=29.49 E-value=1.7e+02 Score=29.46 Aligned_cols=28 Identities=21% Similarity=0.255 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEEec
Q 012253 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (467)
Q Consensus 60 ma~~Aa~~aL~~agi~~~~Id~Li~~Te 87 (467)
.-..+.+++|+++|++++|||.|.++..
T Consensus 47 ~l~~~i~~~l~~a~~~~~did~Iavt~g 74 (323)
T PRK14878 47 VAPELLRKALEKAGISIEDIDAVAVSQG 74 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 3448899999999999999999998653
No 255
>PLN03173 chalcone synthase; Provisional
Probab=28.25 E-value=2.9e+02 Score=28.72 Aligned_cols=35 Identities=6% Similarity=-0.008 Sum_probs=21.5
Q ss_pred HHHHH-HHHHHHHHHHHHHHhhhcCCCCccccceeccCC
Q 012253 215 TCYLM-ALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHS 252 (467)
Q Consensus 215 ~~y~~-a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~ 252 (467)
..|.+ +.+-+.+...+.+ +++|+.++|||++|+..
T Consensus 96 ~~~~~~a~~La~~Aa~~AL---~~ag~~~~dId~li~~t 131 (391)
T PLN03173 96 DMVVVEVPKLGKEAAAKAI---KEWGQPKSKITHLVFCT 131 (391)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHcCCCHHHCCEEEEEc
Confidence 34544 3333444444433 56789999999987664
No 256
>PLN03168 chalcone synthase; Provisional
Probab=27.75 E-value=2.7e+02 Score=28.80 Aligned_cols=36 Identities=8% Similarity=-0.009 Sum_probs=22.8
Q ss_pred HHHHH-HHHHHHHHHHHHHHhhhcCCCCccccceeccCCc
Q 012253 215 TCYLM-ALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSP 253 (467)
Q Consensus 215 ~~y~~-a~~~~~~~~~~~~~~~~~~~~~~~d~d~~i~H~p 253 (467)
..|.+ +.+-+.+..++.+ +++|+.++|||++|+.+-
T Consensus 95 ~~~~~~a~~La~~Aa~~AL---~~ag~~~~dId~lI~~T~ 131 (389)
T PLN03168 95 DIVVVQVPKLAAEAAQKAI---KEWGGRKSDITHIVFATT 131 (389)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHcCCCHHHCCEEEEECC
Confidence 34554 3334444444443 677899999999987653
No 257
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=27.42 E-value=1.5e+02 Score=27.43 Aligned_cols=86 Identities=3% Similarity=-0.054 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHH----HHcCCCcCCcCEEEEEeccCCCCCCcHHH--HHHHHhcccCCCCeeEEeeCCcChHHHHHHHH
Q 012253 57 VISMSLTVVTSLL----EKYKIDPTQIGRLEVGSETVIDKSKSIKT--FLMQIFEKYGNTDIEGVDSTNACYGGTAALFN 130 (467)
Q Consensus 57 ~~~ma~~Aa~~aL----~~agi~~~~Id~Li~~Tes~~~~~ps~a~--~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~ 130 (467)
=.+.+.+++..++ ++. .-+.|+.|.++...+.-..|.+.. .+...|.- + +.. +=.....||++
T Consensus 25 RL~aak~~i~~~~~~f~~~n--p~~~vGlv~fag~~a~v~~plT~D~~~~~~~L~~-----i---~~~-g~~~l~~AL~~ 93 (187)
T cd01452 25 RFQAQADAVNLICQAKTRSN--PENNVGLMTMAGNSPEVLVTLTNDQGKILSKLHD-----V---QPK-GKANFITGIQI 93 (187)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CCccEEEEEecCCceEEEECCCCCHHHHHHHHHh-----C---CCC-CcchHHHHHHH
Confidence 3455556666554 332 235799999988554433443322 33333321 1 112 33467799999
Q ss_pred HHHHHHhCCCC--CCE-EEEEEeecc
Q 012253 131 CVNWVESASWD--GRY-GLVVCTDSA 153 (467)
Q Consensus 131 A~~~l~a~~~~--~~~-aLVV~sD~~ 153 (467)
|...++..... .++ +++++++.-
T Consensus 94 A~~~L~~~~~~~~~~rivi~v~S~~~ 119 (187)
T cd01452 94 AQLALKHRQNKNQKQRIVAFVGSPIE 119 (187)
T ss_pred HHHHHhcCCCcCCcceEEEEEecCCc
Confidence 99998754221 124 666666643
No 258
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=26.68 E-value=70 Score=29.25 Aligned_cols=38 Identities=29% Similarity=0.428 Sum_probs=31.2
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEec
Q 012253 50 FCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (467)
Q Consensus 50 v~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Te 87 (467)
++...+++..=-.+|.++++++.++++++|+.+.+||+
T Consensus 28 ~~Tt~~d~~~gi~~al~~l~~~~~~~~~~i~~v~~gTT 65 (176)
T PF05378_consen 28 VPTTPDDPAEGILEALDALLEESGIDPSDIDRVRHGTT 65 (176)
T ss_pred eCCCCcCHHHHHHHHHHhhhcccCCChhhCcEEEeccH
Confidence 33445777777788899999999999999999999983
No 259
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=26.24 E-value=1.4e+02 Score=38.87 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-EEeccCCCCCCcHHHHHHHHhcccCC--CCeeEEee----CC-cChHHHHHHHHHH
Q 012253 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGN--TDIEGVDS----TN-ACYGGTAALFNCV 132 (467)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~Li-~~Tes~~~~~ps~a~~v~~~Lgl~G~--~~~~~~di----~~-aC~gg~~AL~~A~ 132 (467)
-.++.+++|+++|++|++||.|. +||.|+.. .|.=...|.+.|+.... ..|..--+ ++ -+++|+.+|.-+.
T Consensus 317 q~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~g-D~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~ 395 (2582)
T TIGR02813 317 QAKALKRAYDDAGFAPHTCGLIEAHGTGTAAG-DVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAV 395 (2582)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCCCC-CHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHH
Confidence 36899999999999999999998 67777653 45556778888764211 22333333 33 4666777777776
Q ss_pred HHHHhCCC
Q 012253 133 NWVESASW 140 (467)
Q Consensus 133 ~~l~a~~~ 140 (467)
-.++.+..
T Consensus 396 lal~~~~i 403 (2582)
T TIGR02813 396 LALHHKVL 403 (2582)
T ss_pred HHHhcCCc
Confidence 66776644
No 260
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=26.07 E-value=1.2e+02 Score=25.96 Aligned_cols=51 Identities=10% Similarity=0.020 Sum_probs=31.5
Q ss_pred HHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCC
Q 012253 65 VTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN 119 (467)
Q Consensus 65 a~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~ 119 (467)
..+++++.+++++||-.++|. .|++- -...-+..++.+|. -.++.-++..+
T Consensus 26 l~~i~~~N~l~~edivSv~FT-~T~DL-~a~FPA~aaR~~~~--~~~Vplmc~qE 76 (117)
T cd02185 26 LEEIIERNNIKPEDIISVIFT-VTPDL-DAAFPAKAARELGG--WKYVPLMCAQE 76 (117)
T ss_pred HHHHHHHcCCCHHHEEEEEEE-eCCcc-cccChHHHHHhcCC--CCCcceeecCc
Confidence 445557889999999999984 45532 12233455666643 35666665543
No 261
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=25.72 E-value=90 Score=29.03 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=28.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccC
Q 012253 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETV 89 (467)
Q Consensus 55 Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~ 89 (467)
..-.+.-....+++|++++++++|||.|.++..-+
T Consensus 31 ~~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPG 65 (202)
T TIGR03725 31 RNHSEILLPMIEELLAEAGLSLQDLDAIAVGVGPG 65 (202)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC
Confidence 34566667789999999999999999999976433
No 262
>PRK13410 molecular chaperone DnaK; Provisional
Probab=24.06 E-value=1.3e+02 Score=33.58 Aligned_cols=70 Identities=13% Similarity=0.213 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHH
Q 012253 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A 131 (467)
+...-..+.++++|+++++.+++|+.|+..-.+ -.+|.+...|...||. .-...++ ..-|.+..+|++.+
T Consensus 306 ~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs--sRiP~V~~~l~~~fg~---~~~~~~n-pdeaVA~GAAi~aa 375 (668)
T PRK13410 306 DLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS--TRMPMVQQLVRTLIPR---EPNQNVN-PDEVVAVGAAIQAG 375 (668)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhCcEEEEECCc--cccHHHHHHHHHHcCC---CcccCCC-CchHHHHhHHHHHH
Confidence 355666677889999999999999998854333 2478889999998874 2222222 13455666666654
No 263
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=23.79 E-value=1.6e+02 Score=29.60 Aligned_cols=88 Identities=15% Similarity=0.181 Sum_probs=42.7
Q ss_pred HHHHHHHHHHH---HHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCC------CCe--eEEeeC--------
Q 012253 58 ISMSLTVVTSL---LEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN------TDI--EGVDST-------- 118 (467)
Q Consensus 58 ~~ma~~Aa~~a---L~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~------~~~--~~~di~-------- 118 (467)
.-||-.|+..+ |++.|.+|++-|+|+.| |...--...+.++|...|- .+| .-||..
T Consensus 199 aAMAPAA~dTI~~h~~D~g~~p~dYDlIvTG-----DLg~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGG 273 (329)
T PF07451_consen 199 AAMAPAAADTIEQHFKDTGRSPDDYDLIVTG-----DLGKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGG 273 (329)
T ss_dssp HHHHHHHHHHHHHHHHHCT--GGG-SEEEES-----S-HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-E
T ss_pred hhHhHHHHHHHHHHHHHhCCChhhcCeEEec-----chHHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCC
Confidence 45565665544 46789999999999986 3322222233333332220 011 122222
Q ss_pred C--cChHHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 012253 119 N--ACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 119 ~--aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~sD~~ 153 (467)
. ||++.+.. -.....|+.|.+ +++|||++-..
T Consensus 274 SGcgCSA~V~~-g~ll~~l~~g~~--krvL~vaTGAL 307 (329)
T PF07451_consen 274 SGCGCSAVVLC-GYLLPKLRKGEL--KRVLFVATGAL 307 (329)
T ss_dssp ESHHHHHHHHH-HCHHHHHHTTS---SEEEEEEEEE-
T ss_pred CCcchHHHHHH-HHHHHHHHcCCc--eEEEEEEchhh
Confidence 1 33322221 223466788988 99999988654
No 264
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=23.73 E-value=3.4e+02 Score=24.64 Aligned_cols=89 Identities=9% Similarity=0.112 Sum_probs=48.9
Q ss_pred CHHHHHHHHHHHHHHHc-C-CCcCCcCEEEEEeccCCCCCCcH--HHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHH
Q 012253 56 DVISMSLTVVTSLLEKY-K-IDPTQIGRLEVGSETVIDKSKSI--KTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~a-g-i~~~~Id~Li~~Tes~~~~~ps~--a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A 131 (467)
+-.+-+..++++.+++. . -.-+.|+++.|+..++.-..|-+ ...+...|.- . +. ..+=.....||..|
T Consensus 24 tRl~~ak~~~~~fi~~~~~~~~~~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~~-----~--~~-~~G~t~l~~aL~~A 95 (183)
T cd01453 24 SRLAVVLKLLELFIEEFFDQNPISQLGIISIKNGRAEKLTDLTGNPRKHIQALKT-----A--RE-CSGEPSLQNGLEMA 95 (183)
T ss_pred hHHHHHHHHHHHHHHHHhhcCccccEEEEEEcCCccEEEECCCCCHHHHHHHhhc-----c--cC-CCCchhHHHHHHHH
Confidence 34555666676666542 1 12256999999433332223321 1234444431 1 11 23446788999999
Q ss_pred HHHHHhCC-CCCCEEEEEEeec
Q 012253 132 VNWVESAS-WDGRYGLVVCTDS 152 (467)
Q Consensus 132 ~~~l~a~~-~~~~~aLVV~sD~ 152 (467)
...++... ...+++||+.+|.
T Consensus 96 ~~~l~~~~~~~~~~iiil~sd~ 117 (183)
T cd01453 96 LESLKHMPSHGSREVLIIFSSL 117 (183)
T ss_pred HHHHhcCCccCceEEEEEEcCC
Confidence 99997531 1236788887773
No 265
>cd01461 vWA_interalpha_trypsin_inhibitor vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to the extracellular matrix by binding to hyaluronic acid. The heavy chains carry the VWA domain with a conserved MIDAS motif. Although the exact role of the VWA domains remains unknown, it has been speculated to be involved in mediating protein-protein interactions with the components of the extracellular matrix.
Probab=23.69 E-value=2.8e+02 Score=24.13 Aligned_cols=88 Identities=10% Similarity=0.071 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcC-CcCEEEEEeccCCCC---CCcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHH
Q 012253 57 VISMSLTVVTSLLEKYKIDPT-QIGRLEVGSETVIDK---SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~-~Id~Li~~Tes~~~~---~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~ 132 (467)
..+.+.+|+..++.. +.+. .|..+.|++...... .+.....+.+.+... . .+.. .++.....||..|.
T Consensus 19 ~~~~~~~al~~~l~~--l~~~~~~~l~~Fs~~~~~~~~~~~~~~~~~~~~~~~~l--~---~~~~-~g~T~l~~al~~a~ 90 (171)
T cd01461 19 KIEQTKEALLTALKD--LPPGDYFNIIGFSDTVEEFSPSSVSATAENVAAAIEYV--N---RLQA-LGGTNMNDALEAAL 90 (171)
T ss_pred hHHHHHHHHHHHHHh--CCCCCEEEEEEeCCCceeecCcceeCCHHHHHHHHHHH--H---hcCC-CCCcCHHHHHHHHH
Confidence 356777788888876 4343 488888876543221 111122333333221 1 1111 56777888999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 012253 133 NWVESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 133 ~~l~a~~~~~~~aLVV~sD~~ 153 (467)
..+.... ...+.+|+-+|-.
T Consensus 91 ~~l~~~~-~~~~~iillTDG~ 110 (171)
T cd01461 91 ELLNSSP-GSVPQIILLTDGE 110 (171)
T ss_pred HhhccCC-CCccEEEEEeCCC
Confidence 8887532 2357888877754
No 266
>cd01467 vWA_BatA_type VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if
Probab=23.40 E-value=5.1e+02 Score=22.75 Aligned_cols=89 Identities=10% Similarity=0.104 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCC-cHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHH
Q 012253 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSK-SIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNW 134 (467)
Q Consensus 56 d~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~p-s~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~ 134 (467)
+-.+.+.+++...++. .+-..|..+.|++.......+ .....+.+.+... . .. ...+......||..|..+
T Consensus 24 ~r~~~a~~~~~~~~~~--~~~~~v~lv~f~~~~~~~~~~~~~~~~~~~~l~~l--~---~~-~~~g~T~l~~al~~a~~~ 95 (180)
T cd01467 24 SRLEAAKEVLSDFIDR--RENDRIGLVVFAGAAFTQAPLTLDRESLKELLEDI--K---IG-LAGQGTAIGDAIGLAIKR 95 (180)
T ss_pred CHHHHHHHHHHHHHHh--CCCCeEEEEEEcCCeeeccCCCccHHHHHHHHHHh--h---hc-ccCCCCcHHHHHHHHHHH
Confidence 4567777778777765 334578888887654322111 1122333333210 1 00 112334455788888888
Q ss_pred HHhCCCCCCEEEEEEeecc
Q 012253 135 VESASWDGRYGLVVCTDSA 153 (467)
Q Consensus 135 l~a~~~~~~~aLVV~sD~~ 153 (467)
+.... ..++++||-+|-.
T Consensus 96 l~~~~-~~~~~iiliTDG~ 113 (180)
T cd01467 96 LKNSE-AKERVIVLLTDGE 113 (180)
T ss_pred HHhcC-CCCCEEEEEeCCC
Confidence 87653 2368889988864
No 267
>PLN03171 chalcone synthase-like protein; Provisional
Probab=23.37 E-value=2.7e+02 Score=28.91 Aligned_cols=87 Identities=14% Similarity=0.001 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHHHHHH---------cCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCC-ee----EE-eeCC
Q 012253 55 EDVISMSLTVVTSLLEK---------YKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IE----GV-DSTN 119 (467)
Q Consensus 55 Ed~~~ma~~Aa~~aL~~---------agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~-~~----~~-di~~ 119 (467)
..+..+..++++++|++ .+++++||+.+++ ...+.+--.+.+.||+ +++ .. .+ +.+|
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~H------q~~~~il~~v~~~Lgl--~~ek~~~s~~~l~~yGN 346 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVH------PGSSAILDQVDAALGL--EPEKLAASRRVLSDYGN 346 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEEc------CCcHHHHHHHHHHcCC--CHHHhHHHHHHHHHhCc
Confidence 34556666666777765 5788889887642 2244666788899998 332 21 12 3333
Q ss_pred -cChHHHHHHHHHHHHHHhCCCCC---CEEEEEE
Q 012253 120 -ACYGGTAALFNCVNWVESASWDG---RYGLVVC 149 (467)
Q Consensus 120 -aC~gg~~AL~~A~~~l~a~~~~~---~~aLVV~ 149 (467)
.+++-..+|..+..-.+.+..+| +++|.++
T Consensus 347 tssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~ 380 (399)
T PLN03171 347 MFGATVIFALDELRRQMEEAAAAGAWPELGVMMA 380 (399)
T ss_pred chhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEE
Confidence 44455556655443222111144 6677665
No 268
>cd01480 vWA_collagen_alpha_1-VI-type VWA_collagen alpha(VI) type: The extracellular matrix represents a complex alloy of variable members of diverse protein families defining structural integrity and various physiological functions. The most abundant family is the collagens with more than 20 different collagen types identified thus far. Collagens are centrally involved in the formation of fibrillar and microfibrillar networks of the extracellular matrix, basement membranes as well as other structures of the extracellular matrix. Some collagens have about 15-18 vWA domains in them. The VWA domains present in these collagens mediate protein-protein interactions.
Probab=23.14 E-value=3.9e+02 Score=24.10 Aligned_cols=87 Identities=15% Similarity=0.086 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHc------CCCc--CCcCEEEEEeccCCCC--C--CcHHHHHHHHhcccCCCCeeEEeeCCcChHHHH
Q 012253 59 SMSLTVVTSLLEKY------KIDP--TQIGRLEVGSETVIDK--S--KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTA 126 (467)
Q Consensus 59 ~ma~~Aa~~aL~~a------gi~~--~~Id~Li~~Tes~~~~--~--ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~ 126 (467)
..+.++++.++++. .+.+ ..++++.|++...... . ......+.+.+.- .+ ...+-.....
T Consensus 21 ~~~k~~~~~~~~~l~~~~~~~i~~~~~rvglv~fs~~~~~~~~l~~~~~~~~~l~~~i~~--l~------~~gg~T~~~~ 92 (186)
T cd01480 21 DITKNFVKRVAERFLKDYYRKDPAGSWRVGVVQYSDQQEVEAGFLRDIRNYTSLKEAVDN--LE------YIGGGTFTDC 92 (186)
T ss_pred HHHHHHHHHHHHHHhhhhccCCCCCceEEEEEEecCCceeeEecccccCCHHHHHHHHHh--Cc------cCCCCccHHH
Confidence 33445555555554 2333 3578888876643221 1 1234556665532 11 1133355568
Q ss_pred HHHHHHHHHHhCC-CCCCEEEEEEeecc
Q 012253 127 ALFNCVNWVESAS-WDGRYGLVVCTDSA 153 (467)
Q Consensus 127 AL~~A~~~l~a~~-~~~~~aLVV~sD~~ 153 (467)
||..|...+..+. .+.++++|+-+|=.
T Consensus 93 AL~~a~~~l~~~~~~~~~~~iillTDG~ 120 (186)
T cd01480 93 ALKYATEQLLEGSHQKENKFLLVITDGH 120 (186)
T ss_pred HHHHHHHHHhccCCCCCceEEEEEeCCC
Confidence 9999999887621 13468888888754
No 269
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=23.02 E-value=82 Score=26.90 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=26.9
Q ss_pred EEeccceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEE
Q 012253 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (467)
Q Consensus 40 ~~Gig~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~ 85 (467)
..|+|-|+ ....+...++.+++|++.++++.+|+.|-..
T Consensus 3 ~~GiGcrr-------~~~~~~i~~ai~~~l~~~~~~~~~i~~iasi 41 (121)
T PF01890_consen 3 VLGIGCRR-------GAPAEEIEEAIEQALAEAGLSPRSIAAIASI 41 (121)
T ss_dssp EEEEEE-S-------S--HHHHHHHHHHHHHHCT--GGGEEEEEES
T ss_pred EEEeCcCC-------CCCHHHHHHHHHHHHHHcCCChhhccEEEec
Confidence 46888775 2355666789999999999999999988653
No 270
>cd01817 RGS12_RBD Ubiquitin domain of RGS12 and RGS14. RGS12 (regulator of G signalling 12), and RGS14, are members of a family of GTPase-activating proteins (GAP's) specific for the G-alpha subunit, which act as key inhibitors of G-protein-mediated cell responses in eukaryotes. Their domain architecture includes tandem RBD domains as well as PDZ , PTB, and RGS, and GoLoco domains.
Probab=22.42 E-value=1.6e+02 Score=22.90 Aligned_cols=44 Identities=16% Similarity=0.185 Sum_probs=32.6
Q ss_pred ceEeeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCC
Q 012253 45 QDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK 92 (467)
Q Consensus 45 ~r~~av~~~~Ed~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~ 92 (467)
++...-..+++++-++ ..+++++-|+.++.++...+|+.-+.+.
T Consensus 10 ~~T~V~vrpG~ti~d~----L~kllekRgl~~~~~~vf~~g~~k~l~~ 53 (73)
T cd01817 10 STTVVPTRPGESIRDL----LSGLCEKRGINYAAVDLFLVGGDKPLVL 53 (73)
T ss_pred CeEEEEecCCCCHHHH----HHHHHHHcCCChhHEEEEEecCCccccc
Confidence 3333333567888754 6778889999999999999988877653
No 271
>PLN02377 3-ketoacyl-CoA synthase
Probab=22.08 E-value=4e+02 Score=28.78 Aligned_cols=30 Identities=13% Similarity=0.215 Sum_probs=20.0
Q ss_pred hcCCCCccccceeccC----CchHHHHHHHHHhh
Q 012253 236 EGRQFSMLDVDYFVFH----SPYNKLVQKSFARL 265 (467)
Q Consensus 236 ~~~~~~~~d~d~~i~H----~p~~k~~~k~~~~l 265 (467)
+++|+.++|||.+|+. +|.+.+.-.+.++|
T Consensus 185 ~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~L 218 (502)
T PLN02377 185 ANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKY 218 (502)
T ss_pred HHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHh
Confidence 6678999999999872 23344444555555
No 272
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=21.70 E-value=1.2e+02 Score=25.28 Aligned_cols=58 Identities=17% Similarity=0.244 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCC-CCcHHHHHHHHhcccCCCCeeEEeeCCcChHH
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGG 124 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~-~ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg 124 (467)
..++..+-...++.. + .++.|++||.....+ .|.+..++. ..| -.++..|..+||..+
T Consensus 36 ~~~l~~~~l~~~~~~---~--~peiliiGTG~~~~~~~~~~~~~l~-~~g----I~vE~m~T~aAcrTy 94 (109)
T cd00248 36 LSDLDPEALLPLLAE---D--RPDILLIGTGAEIAFLPRALRAALR-AAG----IGVEVMSTGAACRTY 94 (109)
T ss_pred cccCCHHHHHHHHhh---C--CCCEEEEcCCCCCCcCCHHHHHHHH-HcC----CeEEEeCcHHHHHHH
Confidence 445555556666553 1 378999999765533 233333333 223 357888888898764
No 273
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=21.53 E-value=1.2e+02 Score=29.11 Aligned_cols=47 Identities=13% Similarity=0.090 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCC-cHHHHHHHHhcc
Q 012253 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSK-SIKTFLMQIFEK 106 (467)
Q Consensus 59 ~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~p-s~a~~v~~~Lgl 106 (467)
.....-++.+|++++++++|||.|.+. --|-...| +..+.+++.|-+
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icyT-KGPGmgaPL~~vaivaRtlsl 98 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICYT-KGPGMGAPLSVVAIVARTLSL 98 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEc-CCCCCCCchhhHHHHHHHHHH
Confidence 334455788899999999999999884 33333333 344456666655
No 274
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=21.24 E-value=2e+02 Score=32.18 Aligned_cols=69 Identities=12% Similarity=0.157 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC-CcChHHHHHHHHHH
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCV 132 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~-~aC~gg~~AL~~A~ 132 (467)
...-....++++|+++++++++||.|+..-.+ -..|.+...|.+.||. .... .++ .-|.+..+|++.+.
T Consensus 332 l~~r~~~~v~~~L~~a~~~~~dId~VvLVGGs--sriP~V~~~l~~~fg~---~~~~--~~nPdeaVA~GAAi~a~~ 401 (657)
T PTZ00186 332 LIERSIAPCKQCMKDAGVELKEINDVVLVGGM--TRMPKVVEEVKKFFQK---DPFR--GVNPDEAVALGAATLGGV 401 (657)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCCEEEEECCc--ccChHHHHHHHHHhCC---Cccc--cCCCchHHHHhHHHHHHH
Confidence 35556677889999999999999999854332 2468899999999875 3232 233 35566666666553
No 275
>PLN00415 3-ketoacyl-CoA synthase
Probab=21.01 E-value=5.9e+02 Score=27.22 Aligned_cols=16 Identities=13% Similarity=0.260 Sum_probs=12.8
Q ss_pred hcCCCCccccceeccC
Q 012253 236 EGRQFSMLDVDYFVFH 251 (467)
Q Consensus 236 ~~~~~~~~d~d~~i~H 251 (467)
+++|+.++|||++|..
T Consensus 147 ~~aGi~p~dID~LIvs 162 (466)
T PLN00415 147 KKTGIEPREVGIFIVN 162 (466)
T ss_pred HHcCCCHHHCCEEEEE
Confidence 4568999999998854
No 276
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=20.68 E-value=77 Score=31.01 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEec
Q 012253 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (467)
Q Consensus 58 ~~ma~~Aa~~aL~~agi~~~~Id~Li~~Te 87 (467)
.+.-....+++|++++++++|||.|.++..
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~G 59 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTRG 59 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 455667899999999999999999999653
No 277
>PRK13411 molecular chaperone DnaK; Provisional
Probab=20.58 E-value=1.5e+02 Score=33.00 Aligned_cols=69 Identities=10% Similarity=0.197 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEeccCCCCCCcHHHHHHHHhcccCCCCeeEEeeC-CcChHHHHHHHHH
Q 012253 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNC 131 (467)
Q Consensus 57 ~~~ma~~Aa~~aL~~agi~~~~Id~Li~~Tes~~~~~ps~a~~v~~~Lgl~G~~~~~~~di~-~aC~gg~~AL~~A 131 (467)
...-....++++|+++++.+++||.|+....+ -..|.+...|...||. ..+. ..+. .-|.+..+|++.|
T Consensus 306 l~~~~~~~i~~~L~~a~~~~~~id~ViLvGGs--sriP~v~~~l~~~f~~---~~~~-~~~npdeaVA~GAAi~aa 375 (653)
T PRK13411 306 LVEATIEPMQQALKDAGLKPEDIDRVILVGGS--TRIPAVQEAIQKFFGG---KQPD-RSVNPDEAVALGAAIQAG 375 (653)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEECCC--CCcchHHHHHHHHcCC---cCcC-CCCCchHHHHHHHHHHHH
Confidence 44556677889999999999999988864332 2478899999999863 1111 1122 3455555666544
No 278
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=20.53 E-value=1.2e+02 Score=25.59 Aligned_cols=31 Identities=26% Similarity=0.145 Sum_probs=26.6
Q ss_pred CCceeehhHHhhhhCCCcCeeEEeccceEee
Q 012253 19 PPTCVLQEALEVHDGVSKGKYTVGLGQDCMA 49 (467)
Q Consensus 19 P~~~v~~~el~~~~g~~~~k~~~Gig~r~~a 49 (467)
-++.++.+|+++.....|+++..|.||.-|-
T Consensus 45 TSHkl~~eEle~~lee~~E~ivvGTG~~G~l 75 (121)
T COG1504 45 TSHKLALEELEELLEEGPEVIVVGTGQSGML 75 (121)
T ss_pred cccccCHHHHHHHHhcCCcEEEEecCceeEE
Confidence 3578899999999988999999999998764
No 279
>TIGR03566 FMN_reduc_MsuE FMN reductase, MsuE subfamily. Members of this protein family use NAD(P)H to reduce FMN and regenerate FMNH2. Members include the NADH-dependent enzyme MsuE from Pseudomonas aeruginosa, which serves as a partner to an FMNH2-dependent alkanesulfonate monooxygenase. The NADP-dependent enzyme from E. coli is outside the scope of this model.
Probab=20.23 E-value=3.5e+02 Score=24.17 Aligned_cols=54 Identities=19% Similarity=0.092 Sum_probs=33.1
Q ss_pred CcHHHHHHHHhcccCCCCeeEEeeCCcChHHHHHHHHHHHHHHhCCCCCCEEEEEEe
Q 012253 94 KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCT 150 (467)
Q Consensus 94 ps~a~~v~~~Lgl~G~~~~~~~di~~aC~gg~~AL~~A~~~l~a~~~~~~~aLVV~s 150 (467)
|.-...+.+.+.. .+...|-.-.=..+....|.++.+|+..+.+.+|.+++|++
T Consensus 56 ~~~~~~~~~~i~~---AD~iIi~tP~Y~~s~~~~LKn~lD~~~~~~l~~K~~~~v~~ 109 (174)
T TIGR03566 56 PPDAERILQAIES---ADLLVVGSPVYRGSYTGLFKHLFDLVDPNALIGKPVLLAAT 109 (174)
T ss_pred CHHHHHHHHHHHH---CCEEEEECCcCcCcCcHHHHHHHHhcCHhHhCCCEEEEEEe
Confidence 3334455555543 44444444445567778888888888644445788888765
Done!