BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012259
(467 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/269 (49%), Positives = 176/269 (65%), Gaps = 6/269 (2%)
Query: 26 NGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST 85
+GR+ F+ +G+G+ KTVYK +D VEVAW +++ +L +S + QR E L
Sbjct: 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS--ERQRFKEEAEXLKG 81
Query: 86 LKHDSIIRFYTSWIDV--DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQG 143
L+H +I+RFY SW +K +TE+ TSGTL+ Y K+++ I+ ++SW RQIL+G
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKG 141
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE 203
L +LH+R PP+IHRDLKCDNIF+ G G VKIGDLGLA + R S A +VIGTPEF APE
Sbjct: 142 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-FAKAVIGTPEFXAPE 200
Query: 204 LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
YEE Y+E VDVY+FG C LE T EYPYSEC N AQIY++VTSG P +F + E +
Sbjct: 201 XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK 260
Query: 264 RFIGRCL-VNASKRLSAKELLLDPFLASD 291
I C+ N +R S K+LL F +
Sbjct: 261 EIIEGCIRQNKDERYSIKDLLNHAFFQEE 289
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 142/270 (52%), Gaps = 18/270 (6%)
Query: 24 DPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
DP +Y FE++ G+GA TVY A+D G EVA Q+ L + + + + +E+ ++
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK----ELIINEILVM 71
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQG 143
K+ +I+ + S++ D+ + E G+L + + +D I + R+ LQ
Sbjct: 72 RENKNPNIVNYLDSYLVGDE--LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-VIGTPEFMAP 202
L +LHS VIHRD+K DNI + G G VK+ D G A + +S S ++GTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
Query: 203 ELY-EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLE 261
E+ + Y VD++S G+ +EM E PY NP + + + P + + L
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTP-ELQNPEKLS 243
Query: 262 A--QRFIGRCL-VNASKRLSAKELLLDPFL 288
A + F+ RCL ++ KR SAKELL FL
Sbjct: 244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 142/270 (52%), Gaps = 18/270 (6%)
Query: 24 DPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
DP +Y FE++ G+GA TVY A+D G EVA Q+ L + + + + +E+ ++
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK----ELIINEILVM 71
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQG 143
K+ +I+ + S++ D+ + E G+L + + +D I + R+ LQ
Sbjct: 72 RENKNPNIVNYLDSYLVGDE--LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-VIGTPEFMAP 202
L +LHS VIHRD+K DNI + G G VK+ D G A + +S S ++GTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 203 ELY-EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLE 261
E+ + Y VD++S G+ +EM E PY NP + + + P + + L
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTP-ELQNPEKLS 243
Query: 262 A--QRFIGRCL-VNASKRLSAKELLLDPFL 288
A + F+ RCL ++ KR SAKELL FL
Sbjct: 244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 142/270 (52%), Gaps = 18/270 (6%)
Query: 24 DPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
DP +Y FE++ G+GA TVY A+D G EVA Q+ L + + + + +E+ ++
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK----ELIINEILVM 71
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQG 143
K+ +I+ + S++ D+ + E G+L + + +D I + R+ LQ
Sbjct: 72 RENKNPNIVNYLDSYLVGDE--LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-VIGTPEFMAP 202
L +LHS VIHRD+K DNI + G G VK+ D G A + +S S ++GTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
Query: 203 ELY-EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLE 261
E+ + Y VD++S G+ +EM E PY NP + + + P + + L
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTP-ELQNPEKLS 243
Query: 262 A--QRFIGRCL-VNASKRLSAKELLLDPFL 288
A + F+ RCL ++ KR SAKELL FL
Sbjct: 244 AIFRDFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 142/270 (52%), Gaps = 18/270 (6%)
Query: 24 DPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
DP +Y FE++ G+GA TVY A+D G EVA Q+ L + + + + +E+ ++
Sbjct: 18 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK----ELIINEILVM 72
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQG 143
K+ +I+ + S++ D+ + E G+L + + +D I + R+ LQ
Sbjct: 73 RENKNPNIVNYLDSYLVGDE--LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 129
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-VIGTPEFMAP 202
L +LHS VIHRD+K DNI + G G VK+ D G A + +S S ++GTP +MAP
Sbjct: 130 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
Query: 203 ELY-EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLE 261
E+ + Y VD++S G+ +EM E PY NP + + + P + + L
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTP-ELQNPEKLS 244
Query: 262 A--QRFIGRCL-VNASKRLSAKELLLDPFL 288
A + F+ RCL ++ KR SAKEL+ FL
Sbjct: 245 AIFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 134/249 (53%), Gaps = 19/249 (7%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E+ +G+G VY+A + GV VA +V++ +LM + + E+ LL L H ++
Sbjct: 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI-KEIDLLKQLNHPNV 94
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTL----REYRKKYRRVDIRAIKSWARQILQGLVYL 147
I++Y S+I+ ++ N + E+ +G L + ++K+ R + R + + Q+ L ++
Sbjct: 95 IKYYASFIEDNE--LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG-SKSAHSVIGTPEFMAPE-LY 205
HSR V+HRD+K N+F+ G VK+GDLGL + +AHS++GTP +M+PE ++
Sbjct: 153 HSRR--VMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYP-YSECANPAQIYKKVTSGK---LPGAFYSIQDLE 261
E YN D++S G + EM + P Y + N + KK+ LP YS E
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS---EE 266
Query: 262 AQRFIGRCL 270
++ + C+
Sbjct: 267 LRQLVNMCI 275
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 142/270 (52%), Gaps = 18/270 (6%)
Query: 24 DPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
DP +Y FE++ G+GA TVY A+D G EVA Q+ L + + + + +E+ ++
Sbjct: 18 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK----ELIINEILVM 72
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQG 143
K+ +I+ + S++ D+ + E G+L + + +D I + R+ LQ
Sbjct: 73 RENKNPNIVNYLDSYLVGDE--LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 129
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-VIGTPEFMAP 202
L +LHS VIHR++K DNI + G G VK+ D G A + +S S ++GTP +MAP
Sbjct: 130 LEFLHSNQ--VIHRNIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 186
Query: 203 ELY-EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLE 261
E+ + Y VD++S G+ +EM E PY NP + + + P + + L
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTP-ELQNPEKLS 244
Query: 262 A--QRFIGRCL-VNASKRLSAKELLLDPFL 288
A + F+ RCL ++ KR SAKEL+ FL
Sbjct: 245 AIFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 134/275 (48%), Gaps = 16/275 (5%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
VLGKG VY D V +A ++ + S Q L+ E+ L LKH +I+++
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS----QPLHEEIALHKHLKHKNIVQY 84
Query: 95 YTSWIDVDQKTFNFITEMFTSGTLREY-RKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
S+ + E G+L R K+ + + + I + +QIL+GL YLH D
Sbjct: 85 LGSF--SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH--D 140
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG-SKSAHSVIGTPEFMAPELYEE--- 207
++HRD+K DN+ +N + G +KI D G + L G + + GT ++MAPE+ ++
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIG 267
Y + D++S G ++EM T + P+ E P KV K+ EA+ FI
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFIL 260
Query: 268 RCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKL 301
+C + KR A +LL+D FL K ++ KL
Sbjct: 261 KCFEPDPDKRACANDLLVDEFLKVSSKKKKTQPKL 295
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 16/262 (6%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
VLGKG VY D V +A ++ + S Q L+ E+ L LKH +I+++
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS----QPLHEEIALHKHLKHKNIVQY 70
Query: 95 YTSWIDVDQKTFNFITEMFTSGTLREY-RKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
S+ + E G+L R K+ + + + I + +QIL+GL YLH D
Sbjct: 71 LGSF--SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH--D 126
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG-SKSAHSVIGTPEFMAPELYEE--- 207
++HRD+K DN+ +N + G +KI D G + L G + + GT ++MAPE+ ++
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIG 267
Y + D++S G ++EM T + P+ E P KV K+ EA+ FI
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFIL 246
Query: 268 RCL-VNASKRLSAKELLLDPFL 288
+C + KR A +LL+D FL
Sbjct: 247 KCFEPDPDKRACANDLLVDEFL 268
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 126/231 (54%), Gaps = 37/231 (16%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVA--------WNQVRLNELMRSPDDLQRLYSEVHLL 83
+E +G G+ TV++A E G +VA ++ R+NE +R EV ++
Sbjct: 41 IKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLR----------EVAIM 88
Query: 84 STLKHDSIIRFYTSWIDVDQK-TFNFITEMFTSGTLREYRKKYR-----RVDIRAIKSWA 137
L+H +I+ F + V Q + +TE + G+L YR ++ ++D R S A
Sbjct: 89 KRLRHPNIVLFMGA---VTQPPNLSIVTEYLSRGSL--YRLLHKSGAREQLDERRRLSMA 143
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK--SAHSVIG 195
+ +G+ YLH+R+PP++HR+LK N+ V+ VK+ D GL+ L+ S S+ S G
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY-TVKVCDFGLSR-LKASTFLSSKSAAG 201
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKV 245
TPE+MAPE L +E NE DVYSFG+ + E+ T + P+ NPAQ+ V
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAV 251
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 124/233 (53%), Gaps = 41/233 (17%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVA--------WNQVRLNELMRSPDDLQRLYSEVHLL 83
+E +G G+ TV++A E G +VA ++ R+NE +R EV ++
Sbjct: 41 IKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLR----------EVAIM 88
Query: 84 STLKHDSIIRFYTSWIDVDQK-TFNFITEMFTSGTLREYRKKYR-----RVDIRAIKSWA 137
L+H +I+ F + V Q + +TE + G+L YR ++ ++D R S A
Sbjct: 89 KRLRHPNIVLFMGA---VTQPPNLSIVTEYLSRGSL--YRLLHKSGAREQLDERRRLSMA 143
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGL----AAILRGSKSAHSV 193
+ +G+ YLH+R+PP++HRDLK N+ V+ VK+ D GL A+ SK A
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKY-TVKVCDFGLSRLKASXFLXSKXA--- 199
Query: 194 IGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKV 245
GTPE+MAPE L +E NE DVYSFG+ + E+ T + P+ NPAQ+ V
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAV 251
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 140/270 (51%), Gaps = 21/270 (7%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
+E LGKGA V + + + G+E A + +L S D Q+L E + L+H +I+
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIV 68
Query: 93 RFYTSWIDVDQKTFNFIT-EMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLH 148
R + S + +++F+++ ++ T G L E R+ Y D +QIL+ + Y H
Sbjct: 69 RLHDS---IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC---IQQILESIAYCH 122
Query: 149 SRDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE 206
S ++HR+LK +N+ + VK+ D GLA + S++ H GTP +++PE+ +
Sbjct: 123 SNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 180
Query: 207 ED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQ 263
+D Y++ VD+++ G+ +L + YP + ++Y ++ +G P + EA+
Sbjct: 181 KDPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 264 RFIGRCL-VNASKRLSAKELLLDPFLASDE 292
I L VN KR++A + L P++ + E
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRE 269
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 159/341 (46%), Gaps = 40/341 (11%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
+ VLGKG+ V D++ G E A + ++ + D + L EV LL L H +I+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK-ESLLREVQLLKQLDHPNIM 89
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHS 149
+ Y + D+ F + E++T G L + RK++ VD I RQ+L G+ Y+H
Sbjct: 90 KLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHK 144
Query: 150 RDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
++HRDLK +N+ + ++I D GL+ SK IGT ++APE+
Sbjct: 145 N--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 202
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDL--EAQRF 265
Y+E DV+S G+ + + + P++ AN I KKV GK + + A+
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFN-GANEYDILKKVEKGKYTFELPQWKKVSESAKDL 261
Query: 266 IGRCLVNA-SKRLSAKELLLDPFLA-------SDEVKLLSKTKLNQKPFLNETELEKLQL 317
I + L S R+SA++ L ++ S +V L LN + F +L + L
Sbjct: 262 IRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAAL 321
Query: 318 SDDPPRTDMTITGKLNPEDDT-----IFLKVQIADKDGPGR 353
+ + KL +D+T IF K+ DK+G G+
Sbjct: 322 --------LYMGSKLTSQDETKELTAIFHKM---DKNGDGQ 351
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 159/341 (46%), Gaps = 40/341 (11%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
+ VLGKG+ V D++ G E A + ++ + D + L EV LL L H +I+
Sbjct: 54 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQV-KQKTDKESLLREVQLLKQLDHPNIM 112
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHS 149
+ Y + D+ F + E++T G L + RK++ VD I RQ+L G+ Y+H
Sbjct: 113 KLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHK 167
Query: 150 RDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
++HRDLK +N+ + ++I D GL+ SK IGT ++APE+
Sbjct: 168 N--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 225
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDL--EAQRF 265
Y+E DV+S G+ + + + P++ AN I KKV GK + + A+
Sbjct: 226 TYDEKCDVWSTGVILYILLSGCPPFN-GANEYDILKKVEKGKYTFELPQWKKVSESAKDL 284
Query: 266 IGRCLVNA-SKRLSAKELLLDPFLA-------SDEVKLLSKTKLNQKPFLNETELEKLQL 317
I + L S R+SA++ L ++ S +V L LN + F +L + L
Sbjct: 285 IRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAAL 344
Query: 318 SDDPPRTDMTITGKLNPEDDT-----IFLKVQIADKDGPGR 353
+ + KL +D+T IF K+ DK+G G+
Sbjct: 345 --------LYMGSKLTSQDETKELTAIFHKM---DKNGDGQ 374
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 140/270 (51%), Gaps = 21/270 (7%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
+E LGKGA V + + + G+E A + +L S D Q+L E + L+H +I+
Sbjct: 10 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIV 67
Query: 93 RFYTSWIDVDQKTFNFIT-EMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLH 148
R + S + +++F+++ ++ T G L E R+ Y D +QIL+ + Y H
Sbjct: 68 RLHDS---IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC---IQQILESIAYCH 121
Query: 149 SRDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE 206
S ++HR+LK +N+ + VK+ D GLA + S++ H GTP +++PE+ +
Sbjct: 122 SNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 179
Query: 207 ED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQ 263
+D Y++ VD+++ G+ +L + YP + ++Y ++ +G P + EA+
Sbjct: 180 KDPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 238
Query: 264 RFIGRCL-VNASKRLSAKELLLDPFLASDE 292
I L VN KR++A + L P++ + E
Sbjct: 239 SLIDSMLTVNPKKRITADQALKVPWICNRE 268
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 140/270 (51%), Gaps = 21/270 (7%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
+E LGKGA V + + + G+E A + +L S D Q+L E + L+H +I+
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIV 68
Query: 93 RFYTSWIDVDQKTFNFIT-EMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLH 148
R + S + +++F+++ ++ T G L E R+ Y D +QIL+ + Y H
Sbjct: 69 RLHDS---IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC---IQQILESIAYCH 122
Query: 149 SRDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE 206
S ++HR+LK +N+ + VK+ D GLA + S++ H GTP +++PE+ +
Sbjct: 123 SNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 180
Query: 207 ED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQ 263
+D Y++ VD+++ G+ +L + YP + ++Y ++ +G P + EA+
Sbjct: 181 KDPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 264 RFIGRCL-VNASKRLSAKELLLDPFLASDE 292
I L VN KR++A + L P++ + E
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRE 269
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 159/341 (46%), Gaps = 40/341 (11%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
+ VLGKG+ V D++ G E A + ++ + D + L EV LL L H +I+
Sbjct: 55 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQV-KQKTDKESLLREVQLLKQLDHPNIM 113
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHS 149
+ Y + D+ F + E++T G L + RK++ VD I RQ+L G+ Y+H
Sbjct: 114 KLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHK 168
Query: 150 RDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
++HRDLK +N+ + ++I D GL+ SK IGT ++APE+
Sbjct: 169 N--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 226
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDL--EAQRF 265
Y+E DV+S G+ + + + P++ AN I KKV GK + + A+
Sbjct: 227 TYDEKCDVWSTGVILYILLSGCPPFN-GANEYDILKKVEKGKYTFELPQWKKVSESAKDL 285
Query: 266 IGRCLVNA-SKRLSAKELLLDPFLA-------SDEVKLLSKTKLNQKPFLNETELEKLQL 317
I + L S R+SA++ L ++ S +V L LN + F +L + L
Sbjct: 286 IRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAAL 345
Query: 318 SDDPPRTDMTITGKLNPEDDT-----IFLKVQIADKDGPGR 353
+ + KL +D+T IF K+ DK+G G+
Sbjct: 346 --------LYMGSKLTSQDETKELTAIFHKM---DKNGDGQ 375
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 140/270 (51%), Gaps = 21/270 (7%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
+E LGKGA V + + + G+E A + +L S D Q+L E + L+H +I+
Sbjct: 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIV 91
Query: 93 RFYTSWIDVDQKTFNFIT-EMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLH 148
R + S + +++F+++ ++ T G L E R+ Y D +QIL+ + Y H
Sbjct: 92 RLHDS---IQEESFHYLVFDLVTGGELFEDIVAREFYSEADA---SHCIQQILESIAYCH 145
Query: 149 SRDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE 206
S ++HR+LK +N+ + VK+ D GLA + S++ H GTP +++PE+ +
Sbjct: 146 SNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 203
Query: 207 ED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQ 263
+D Y++ VD+++ G+ +L + YP + ++Y ++ +G P + EA+
Sbjct: 204 KDPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 262
Query: 264 RFIGRCL-VNASKRLSAKELLLDPFLASDE 292
I L VN KR++A + L P++ + E
Sbjct: 263 SLIDSMLTVNPKKRITADQALKVPWICNRE 292
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 14/222 (6%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
+ VLGKG+ V D++ G E A + ++ + D + L EV LL L H +I+
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK-ESLLREVQLLKQLDHPNIM 95
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHS 149
+ Y + D+ F + E++T G L + RK++ VD I RQ+L G+ Y+H
Sbjct: 96 KLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHK 150
Query: 150 RDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
++HRDLK +N+ + ++I D GL+ SK IGT ++APE+
Sbjct: 151 N--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 208
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
Y+E DV+S G+ + + + P++ AN I KKV GK
Sbjct: 209 TYDEKCDVWSTGVILYILLSGCPPFN-GANEYDILKKVEKGK 249
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 16/218 (7%)
Query: 74 QRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREY---RKKYRRVDI 130
+ +Y+E+ LL +L H +II+ + + D+K F +TE + G L E R K+ D
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVF--EDKKYFYLVTEFYEGGELFEQIINRHKFDECDA 148
Query: 131 RAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFV--NGHLGQVKIGDLGLAAILRGSK 188
I +QIL G+ YLH + ++HRD+K +NI + L +KI D GL++
Sbjct: 149 ANI---MKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY 203
Query: 189 SAHSVIGTPEFMAPELYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG 248
+GT ++APE+ ++ YNE DV+S G+ ++ + C YP N I KKV G
Sbjct: 204 KLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGV-IMYILLCGYPPFGGQNDQDIIKKVEKG 262
Query: 249 KLPGAFYSIQDL--EAQRFIGRCLV-NASKRLSAKELL 283
K F +++ EA+ I L + +KR +A+E L
Sbjct: 263 KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEAL 300
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 132/264 (50%), Gaps = 21/264 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG+G+ +VYKAI + G VA QV + DLQ + E+ ++ +++
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVE------SDLQEIIKEISIMQQCDSPHVVK 88
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLRE-YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+Y S+ + E +G++ + R + + + I + + L+GL YLH
Sbjct: 89 YYGSYF--KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-VIGTPEFMAPELYEE-DYN 210
IHRD+K NI +N G K+ D G+A L + + VIGTP +MAPE+ +E YN
Sbjct: 147 --IHRDIKAGNILLNTE-GHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 211 ELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQR---FIG 267
+ D++S G+ +EM + PY++ I+ T+ P + +L + F+
Sbjct: 204 CVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN---PPPTFRKPELWSDNFTDFVK 260
Query: 268 RCLVNA-SKRLSAKELLLDPFLAS 290
+CLV + +R +A +LL PF+ S
Sbjct: 261 QCLVKSPEQRATATQLLQHPFVRS 284
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 23/272 (8%)
Query: 29 YGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKH 88
Y LFEE LGKGA V + + + G E A + +L S D Q+L E + LKH
Sbjct: 24 YQLFEE-LGKGAFSVVRRCVKVLAGQEYAAKIINTKKL--SARDHQKLEREARICRLLKH 80
Query: 89 DSIIRFYTSWIDVDQK--TFNFIT--EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGL 144
+I+R + S + F+ +T E+F REY Y D +QIL+ +
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY---YSEAD---ASHCIQQILEAV 134
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSA-HSVIGTPEFMA 201
++ H V+HRDLK +N+ + L VK+ D GLA + G + A GTP +++
Sbjct: 135 LHCHQMG--VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLS 192
Query: 202 PELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQ 258
PE+ +D Y + VD+++ G+ +L + YP + ++Y+++ +G P +
Sbjct: 193 PEVLRKDPYGKPVDLWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 251
Query: 259 DLEAQRFIGRCL-VNASKRLSAKELLLDPFLA 289
EA+ I + L +N SKR++A E L P+++
Sbjct: 252 TPEAKDLINKMLTINPSKRITAAEALKHPWIS 283
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 139/303 (45%), Gaps = 44/303 (14%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
+EV+G GA V A +VA ++ L + S D+L + E+ +S H +I
Sbjct: 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK---EIQAMSQCHHPNI 75
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK--------KYRRVDIRAIKSWARQILQG 143
+ +YTS++ D+ + ++ + G++ + K K +D I + R++L+G
Sbjct: 76 VSYYTSFVVKDE--LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG------SKSAHSVIGTP 197
L YLH IHRD+K NI + G G V+I D G++A L +K + +GTP
Sbjct: 134 LEYLHKNGQ--IHRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 198 EFMAPELYEE--DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+MAPE+ E+ Y+ D++SFG+ +E+ T PY + P ++ P
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSLET 249
Query: 256 SIQDLEA--------QRFIGRCLV-NASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPF 306
+QD E ++ I CL + KR +A ELL F K K F
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF----------QKAKNKEF 299
Query: 307 LNE 309
L E
Sbjct: 300 LQE 302
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 34/282 (12%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
+EV+G GA V A +VA ++ L + S D+L + E+ +S H +I
Sbjct: 14 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK---EIQAMSQCHHPNI 70
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK--------KYRRVDIRAIKSWARQILQG 143
+ +YTS++ D+ + ++ + G++ + K K +D I + R++L+G
Sbjct: 71 VSYYTSFVVKDE--LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG------SKSAHSVIGTP 197
L YLH IHRD+K NI + G G V+I D G++A L +K + +GTP
Sbjct: 129 LEYLHKNGQ--IHRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 198 EFMAPELYEE--DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+MAPE+ E+ Y+ D++SFG+ +E+ T PY + P ++ P
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSLET 244
Query: 256 SIQDLEA--------QRFIGRCLV-NASKRLSAKELLLDPFL 288
+QD E ++ I CL + KR +A ELL F
Sbjct: 245 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 286
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
+ VLGKG+ V D++ G E A + ++ + D + L EV LL L H +I
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK-ESLLREVQLLKQLDHPNIX 89
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHS 149
+ Y + D+ F + E++T G L + RK++ VD I RQ+L G+ Y H
Sbjct: 90 KLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYXHK 144
Query: 150 RDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
++HRDLK +N+ + ++I D GL+ SK IGT ++APE+
Sbjct: 145 N--KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG 202
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
Y+E DV+S G+ + + + P++ AN I KKV GK
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFN-GANEYDILKKVEKGK 243
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 142/295 (48%), Gaps = 63/295 (21%)
Query: 32 FEE--VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
FEE VLG+GA V KA + + A ++R E + L + SEV LL++L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-----EKLSTILSEVMLLASLNHQ 62
Query: 90 SIIRFYTSWID----------VDQKTFNFIT----------EMFTSGTLREYRKKYRRVD 129
++R+Y +W++ V +K+ FI ++ S L + R +Y R+
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL- 121
Query: 130 IRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA------- 182
RQIL+ L Y+HS+ +IHRDLK NIF++ VKIGD GLA
Sbjct: 122 -------FRQILEALSYIHSQG--IIHRDLKPMNIFIDES-RNVKIGDFGLAKNVHRSLD 171
Query: 183 ILR--------GSKSAHSVIGTPEFMAPELYEED--YNELVDVYSFGMCVLEMFTCEYPY 232
IL+ S + S IGT ++A E+ + YNE +D+YS G+ EM YP+
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPF 228
Query: 233 SECANPAQIYKKV--TSGKLPGAFYSIQDLEAQRFIGRCLV--NASKRLSAKELL 283
S I KK+ S + P F ++ ++ I R L+ + +KR A+ LL
Sbjct: 229 STGMERVNILKKLRSVSIEFPPDFDD-NKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 142/295 (48%), Gaps = 63/295 (21%)
Query: 32 FEE--VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
FEE VLG+GA V KA + + A ++R E + L + SEV LL++L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-----EKLSTILSEVMLLASLNHQ 62
Query: 90 SIIRFYTSWID----------VDQKTFNFIT----------EMFTSGTLREYRKKYRRVD 129
++R+Y +W++ V +K+ FI ++ S L + R +Y R+
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL- 121
Query: 130 IRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA------- 182
RQIL+ L Y+HS+ +IHRDLK NIF++ VKIGD GLA
Sbjct: 122 -------FRQILEALSYIHSQG--IIHRDLKPMNIFIDES-RNVKIGDFGLAKNVHRSLD 171
Query: 183 ILR--------GSKSAHSVIGTPEFMAPELYEED--YNELVDVYSFGMCVLEMFTCEYPY 232
IL+ S + S IGT ++A E+ + YNE +D+YS G+ EM YP+
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPF 228
Query: 233 SECANPAQIYKKVTSGKL--PGAFYSIQDLEAQRFIGRCLV--NASKRLSAKELL 283
S I KK+ S + P F ++ ++ I R L+ + +KR A+ LL
Sbjct: 229 STGMERVNILKKLRSVSIEFPPDFDD-NKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 160/344 (46%), Gaps = 52/344 (15%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LG GA V D+V VE A +R + S + +L EV +L L H +I++ Y
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN--SKLLEEVAVLKLLDHPNIMKLY 102
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ D++ + + E + G L + +R K+ VD I +Q+L G+ YLH +
Sbjct: 103 DFF--EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVI---IKQVLSGVTYLHKHN- 156
Query: 153 PVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEEDYN 210
++HRDLK +N+ + +KI D GL+A+ K +GT ++APE+ + Y+
Sbjct: 157 -IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYD 215
Query: 211 ELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLE-------AQ 263
E DV+S G+ +L + YP +I +KV GK Y+ E A+
Sbjct: 216 EKCDVWSIGV-ILFILLAGYPPFGGQTDQEILRKVEKGK-----YTFDSPEWKNVSEGAK 269
Query: 264 RFIGRCL-VNASKRLSAKELLLDPFL--------ASDEVKLLSKTKLNQKPFLNETELEK 314
I + L ++ +R+SA++ L P++ + E+ L+ N + F N +L +
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQ 329
Query: 315 LQLSDDPPRTDMTITGKLNPEDDT-----IFLKVQIADKDGPGR 353
L + + KL +++T IF + DK+G G+
Sbjct: 330 AAL--------LYMASKLTSQEETKELTDIFRHI---DKNGDGQ 362
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 19/263 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LG GA V D++ G E A ++ + + + + L EV +L L H +I++ Y
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNS-GALLDEVAVLKQLDHPNIMKLY 87
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ D++ + + E++ G L + R+K+ VD I +Q+L G YLH +
Sbjct: 88 EFF--EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI---MKQVLSGTTYLHKHN- 141
Query: 153 PVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEEDYN 210
++HRDLK +N+ + +KI D GL+A +GT ++APE+ + Y+
Sbjct: 142 -IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYD 200
Query: 211 ELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL---PGAFYSIQDLEAQRFIG 267
E DV+S G+ +L + C YP +I K+V GK P + + D EA++ +
Sbjct: 201 EKCDVWSCGV-ILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD-EAKQLVK 258
Query: 268 RCLV-NASKRLSAKELLLDPFLA 289
L SKR+SA+E L P++
Sbjct: 259 LMLTYEPSKRISAEEALNHPWIV 281
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 19/263 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LG GA V D++ G E A ++ + + + + L EV +L L H +I++ Y
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNS-GALLDEVAVLKQLDHPNIMKLY 70
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ D++ + + E++ G L + R+K+ VD I +Q+L G YLH +
Sbjct: 71 EFF--EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI---MKQVLSGTTYLHKHN- 124
Query: 153 PVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEEDYN 210
++HRDLK +N+ + +KI D GL+A +GT ++APE+ + Y+
Sbjct: 125 -IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYD 183
Query: 211 ELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL---PGAFYSIQDLEAQRFIG 267
E DV+S G+ +L + C YP +I K+V GK P + + D EA++ +
Sbjct: 184 EKCDVWSCGV-ILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD-EAKQLVK 241
Query: 268 RCLV-NASKRLSAKELLLDPFLA 289
L SKR+SA+E L P++
Sbjct: 242 LMLTYEPSKRISAEEALNHPWIV 264
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 17/259 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G+ V A G VA ++ L + R + L++EV ++ +H++++ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEMY 214
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
S++ D+ + E G L + + R++ I + +LQ L LH++ VI
Sbjct: 215 NSYLVGDE--LWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 269
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEE-DYNELV 213
HRD+K D+I + H G+VK+ D G A + + ++GTP +MAPEL Y V
Sbjct: 270 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 214 DVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEA--QRFIGRCLV 271
D++S G+ V+EM E PY P K+ LP ++ + + F+ R LV
Sbjct: 329 DIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 386
Query: 272 -NASKRLSAKELLLDPFLA 289
+ ++R +A ELL PFLA
Sbjct: 387 RDPAQRATAAELLKHPFLA 405
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 23/272 (8%)
Query: 29 YGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKH 88
Y LFEE LGKGA V + + + G E A + +L S D Q+L E + LKH
Sbjct: 13 YQLFEE-LGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLEREARICRLLKH 69
Query: 89 DSIIRFYTSWIDVDQK--TFNFIT--EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGL 144
+I+R + S + F+ +T E+F REY Y D +QIL+ +
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY---YSEAD---ASHCIQQILEAV 123
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSA-HSVIGTPEFMA 201
++ H V+HR+LK +N+ + L VK+ D GLA + G + A GTP +++
Sbjct: 124 LHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLS 181
Query: 202 PELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQ 258
PE+ +D Y + VD+++ G+ +L + YP + ++Y+++ +G P +
Sbjct: 182 PEVLRKDPYGKPVDLWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 240
Query: 259 DLEAQRFIGRCL-VNASKRLSAKELLLDPFLA 289
EA+ I + L +N SKR++A E L P+++
Sbjct: 241 TPEAKDLINKMLTINPSKRITAAEALKHPWIS 272
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 17/259 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G+ V A G VA ++ L + R + L++EV ++ +H++++ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEMY 137
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
S++ D+ + E G L + + R++ I + +LQ L LH++ VI
Sbjct: 138 NSYLVGDE--LWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 192
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEE-DYNELV 213
HRD+K D+I + H G+VK+ D G A + + ++GTP +MAPEL Y V
Sbjct: 193 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 214 DVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEA--QRFIGRCLV 271
D++S G+ V+EM E PY P K+ LP ++ + + F+ R LV
Sbjct: 252 DIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 309
Query: 272 -NASKRLSAKELLLDPFLA 289
+ ++R +A ELL PFLA
Sbjct: 310 RDPAQRATAAELLKHPFLA 328
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 14/213 (6%)
Query: 26 NGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST 85
N RY + ++ LG G M TVY A D +L ++VA + + + + L+R EVH S
Sbjct: 10 NERYKIVDK-LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKE-ETLKRFEREVHNSSQ 67
Query: 86 LKHDSIIRFYTSWIDVDQK--TFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQG 143
L H +I+ S IDVD++ + + E TL EY + + + + ++ QIL G
Sbjct: 68 LSHQNIV----SMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDG 123
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK--SAHSVIGTPEFMA 201
+ H+ D ++HRD+K NI ++ + +KI D G+A L + + V+GT ++ +
Sbjct: 124 I--KHAHDMRIVHRDIKPQNILIDSN-KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFS 180
Query: 202 PELYE-EDYNELVDVYSFGMCVLEMFTCEYPYS 233
PE + E +E D+YS G+ + EM E P++
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 17/259 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G+ V A G VA ++ L + R + L++EV ++ +H++++ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEMY 92
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
S++ D+ + E G L + + R++ I + +LQ L LH++ VI
Sbjct: 93 NSYLVGDE--LWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 147
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEE-DYNELV 213
HRD+K D+I + H G+VK+ D G A + + ++GTP +MAPEL Y V
Sbjct: 148 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 214 DVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEA--QRFIGRCLV 271
D++S G+ V+EM E PY P K+ LP ++ + + F+ R LV
Sbjct: 207 DIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 264
Query: 272 -NASKRLSAKELLLDPFLA 289
+ ++R +A ELL PFLA
Sbjct: 265 RDPAQRATAAELLKHPFLA 283
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 139/272 (51%), Gaps = 23/272 (8%)
Query: 29 YGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKH 88
Y LFEE LGKGA V + + + E A + +L S D Q+L E + LKH
Sbjct: 33 YQLFEE-LGKGAFSVVRRCVKKTPTQEYAAKIINTKKL--SARDHQKLEREARICRLLKH 89
Query: 89 DSIIRFYTSWIDVDQKTFNFIT-EMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGL 144
+I+R + S + ++ F+++ ++ T G L E R+ Y D QIL+ +
Sbjct: 90 PNIVRLHDS---ISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHCIHQILESV 143
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSA-HSVIGTPEFMA 201
++H D ++HRDLK +N+ + VK+ D GLA ++G + A GTP +++
Sbjct: 144 NHIHQHD--IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLS 201
Query: 202 PELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQ 258
PE+ +D Y + VD+++ G+ +L + YP + ++Y+++ +G P +
Sbjct: 202 PEVLRKDPYGKPVDIWACGV-ILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTV 260
Query: 259 DLEAQRFIGRCL-VNASKRLSAKELLLDPFLA 289
EA+ I + L +N +KR++A + L P++
Sbjct: 261 TPEAKNLINQMLTINPAKRITADQALKHPWVC 292
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 17/259 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G+ V A G VA ++ L + R + L++EV ++ +H++++ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEMY 94
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
S++ D+ + E G L + + R++ I + +LQ L LH++ VI
Sbjct: 95 NSYLVGDE--LWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 149
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEE-DYNELV 213
HRD+K D+I + H G+VK+ D G A + + ++GTP +MAPEL Y V
Sbjct: 150 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 214 DVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEA--QRFIGRCLV 271
D++S G+ V+EM E PY P K+ LP ++ + + F+ R LV
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 266
Query: 272 -NASKRLSAKELLLDPFLA 289
+ ++R +A ELL PFLA
Sbjct: 267 RDPAQRATAAELLKHPFLA 285
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 17/259 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G+ V A G VA ++ L + R + L++EV ++ +H++++ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEMY 87
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
S++ D+ + E G L + + R++ I + +LQ L LH++ VI
Sbjct: 88 NSYLVGDE--LWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 142
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEE-DYNELV 213
HRD+K D+I + H G+VK+ D G A + + ++GTP +MAPEL Y V
Sbjct: 143 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 214 DVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEA--QRFIGRCLV 271
D++S G+ V+EM E PY P K+ LP ++ + + F+ R LV
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 259
Query: 272 -NASKRLSAKELLLDPFLA 289
+ ++R +A ELL PFLA
Sbjct: 260 RDPAQRATAAELLKHPFLA 278
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 17/259 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G+ V A G VA ++ L + R + L++EV ++ +H++++ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEMY 83
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
S++ D+ + E G L + + R++ I + +LQ L LH++ VI
Sbjct: 84 NSYLVGDE--LWVVMEFLEGGALTDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQG--VI 138
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEE-DYNELV 213
HRD+K D+I + H G+VK+ D G A + + ++GTP +MAPEL Y V
Sbjct: 139 HRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 214 DVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEA--QRFIGRCLV 271
D++S G+ V+EM E PY P K+ LP ++ + + F+ R LV
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 255
Query: 272 -NASKRLSAKELLLDPFLA 289
+ ++R +A ELL PFLA
Sbjct: 256 RDPAQRATAAELLKHPFLA 274
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 141/276 (51%), Gaps = 20/276 (7%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL 86
G Y L + + GKG V A + G EVA + +L +P LQ+L+ EV ++ L
Sbjct: 12 GNYRLLKTI-GKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKIL 68
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
H +I++ + + +KT I E + G + +Y + R+ + +S RQI+ + Y
Sbjct: 69 NHPNIVKLFE--VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY 126
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE 206
H + ++HRDLK +N+ ++ + +KI D G + + G+P + APEL++
Sbjct: 127 CHQKR--IVHRDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQ 183
Query: 207 -EDYNE-LVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLE--A 262
+ Y+ VDV+S G+ + + + P+ + N ++ ++V GK FY D E
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLL 242
Query: 263 QRFIGRCLVNASKRLSAKELLLDPFLAS----DEVK 294
+RF+ ++N KR + ++++ D ++ + DE+K
Sbjct: 243 KRFL---VLNPIKRGTLEQIMKDRWINAGHEEDELK 275
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 148/296 (50%), Gaps = 29/296 (9%)
Query: 7 LAGAADEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNEL 66
+A ADE + HIG Y L + + GKG V A + G EVA + +L
Sbjct: 4 IASCADE-QPHIG--------NYRLLKTI-GKGNFAKVKLARHILTGREVAIKIIDKTQL 53
Query: 67 MRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR 126
+P LQ+L+ EV ++ L H +I++ + + +KT I E + G + +Y +
Sbjct: 54 --NPTSLQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLIMEYASGGEVFDYLVAHG 109
Query: 127 RVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG 186
R+ + +S RQI+ + Y H + ++HRDLK +N+ ++ + +KI D G +
Sbjct: 110 RMKEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDADM-NIKIADFGFSNEFTV 166
Query: 187 SKSAHSVIGTPEFMAPELYE-EDYNE-LVDVYSFGMCVLEMFTCEYPYSECANPAQIYKK 244
+ G P + APEL++ + Y+ VDV+S G+ + + + P+ + N ++ ++
Sbjct: 167 GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRER 225
Query: 245 VTSGKLPGAFYSIQDLE--AQRFIGRCLVNASKRLSAKELLLDPFLAS----DEVK 294
V GK FY D E +RF+ ++N KR + ++++ D ++ + DE+K
Sbjct: 226 VLRGKYRIPFYMSTDCENLLKRFL---VLNPIKRGTLEQIMKDRWINAGHEEDELK 278
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 138/272 (50%), Gaps = 23/272 (8%)
Query: 29 YGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKH 88
Y L+E++ GKGA V + + G E A + +L S D Q+L E + LKH
Sbjct: 6 YQLYEDI-GKGAFSVVRRCVKLCTGHEYAAKIINTKKL--SARDHQKLEREARICRLLKH 62
Query: 89 DSIIRFYTSWIDVDQKTFNFIT-EMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGL 144
+I+R + S + ++ F+++ ++ T G L E R+ Y D +QIL+ +
Sbjct: 63 SNIVRLHDS---ISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHCIQQILEAV 116
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSA-HSVIGTPEFMA 201
LH V+HRDLK +N+ + VK+ D GLA ++G + A GTP +++
Sbjct: 117 --LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 202 PE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQ 258
PE L +E Y + VD+++ G+ +L + YP + ++Y+++ +G P +
Sbjct: 175 PEVLRKEAYGKPVDIWACGV-ILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTV 233
Query: 259 DLEAQRFIGRCL-VNASKRLSAKELLLDPFLA 289
EA+ I + L +N +KR++A E L P++
Sbjct: 234 TPEAKNLINQMLTINPAKRITAHEALKHPWVC 265
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 121/255 (47%), Gaps = 58/255 (22%)
Query: 32 FEE--VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
FEE VLG+GA V KA + + A ++R E + L + SEV LL++L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-----EKLSTILSEVXLLASLNHQ 62
Query: 90 SIIRFYTSWID----------VDQKTFNFIT----------EMFTSGTLREYRKKYRRVD 129
++R+Y +W++ V +K+ FI ++ S L + R +Y R+
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL- 121
Query: 130 IRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA------- 182
RQIL+ L Y+HS+ +IHR+LK NIF++ VKIGD GLA
Sbjct: 122 -------FRQILEALSYIHSQG--IIHRNLKPXNIFIDES-RNVKIGDFGLAKNVHRSLD 171
Query: 183 ILR--------GSKSAHSVIGTPEFMAPELYEED--YNELVDVYSFGMCVLEMFTCEYPY 232
IL+ S + S IGT ++A E+ + YNE +D YS G+ E YP+
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPF 228
Query: 233 SECANPAQIYKKVTS 247
S I KK+ S
Sbjct: 229 STGXERVNILKKLRS 243
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 138/272 (50%), Gaps = 23/272 (8%)
Query: 29 YGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKH 88
Y LFEE LGKGA V + + G E A + +L S D Q+L E + LKH
Sbjct: 6 YQLFEE-LGKGAFSVVRRCMKIPTGQEYAAKIINTKKL--SARDHQKLEREARICRLLKH 62
Query: 89 DSIIRFYTSWIDVDQKTFNFIT-EMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGL 144
+I+R + S + ++ F+++ ++ T G L E R+ Y D +QIL+ +
Sbjct: 63 PNIVRLHDS---ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHC---IQQILESV 116
Query: 145 VYLHSRDPPVIHRDLKCDNIFV--NGHLGQVKIGDLGLAAILRGSKSA-HSVIGTPEFMA 201
+ H ++HRDLK +N+ + VK+ D GLA ++G + A GTP +++
Sbjct: 117 NHCHLNG--IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 202 PELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQ 258
PE+ +D Y + VD+++ G+ +L + YP + ++Y+++ +G P +
Sbjct: 175 PEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 233
Query: 259 DLEAQRFIGRCL-VNASKRLSAKELLLDPFLA 289
EA+ I + L +N +KR++A E L P++
Sbjct: 234 TPEAKDLINKMLTINPAKRITASEALKHPWIC 265
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 121/237 (51%), Gaps = 11/237 (4%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL 86
G Y L ++ +GKG V A + G EVA + +L +P LQ+L+ EV ++ L
Sbjct: 15 GNYRL-QKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL--NPTSLQKLFREVRIMKIL 71
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
H +I++ + + +KT + E + G + +Y + R+ + ++ RQI+ + Y
Sbjct: 72 NHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 129
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE 206
H + ++HRDLK +N+ ++G + +KI D G + + G+P + APEL++
Sbjct: 130 CHQK--YIVHRDLKAENLLLDGDM-NIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQ 186
Query: 207 -EDYNE-LVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLE 261
+ Y+ VDV+S G+ + + + P+ + N ++ ++V GK FY D E
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCE 242
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 138/272 (50%), Gaps = 23/272 (8%)
Query: 29 YGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKH 88
Y LFEE LGKGA V + + G E A + +L S D Q+L E + LKH
Sbjct: 6 YQLFEE-LGKGAFSVVRRCMKIPTGQEYAAKIINTKKL--SARDHQKLEREARICRLLKH 62
Query: 89 DSIIRFYTSWIDVDQKTFNFIT-EMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGL 144
+I+R + S + ++ F+++ ++ T G L E R+ Y D +QIL+ +
Sbjct: 63 PNIVRLHDS---ISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHCIQQILESV 116
Query: 145 VYLHSRDPPVIHRDLKCDNIFV--NGHLGQVKIGDLGLAAILRGSKSA-HSVIGTPEFMA 201
+ H ++HRDLK +N+ + VK+ D GLA ++G + A GTP +++
Sbjct: 117 NHCHLNG--IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 202 PELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQ 258
PE+ +D Y + VD+++ G+ +L + YP + ++Y+++ +G P +
Sbjct: 175 PEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 233
Query: 259 DLEAQRFIGRCL-VNASKRLSAKELLLDPFLA 289
EA+ I + L +N +KR++A E L P++
Sbjct: 234 TPEAKDLINKMLTINPAKRITASEALKHPWIC 265
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 161/330 (48%), Gaps = 44/330 (13%)
Query: 8 AGAADEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM 67
A +ADE + HIG Y L + + GKG V A + G EVA + +L
Sbjct: 4 ATSADE-QPHIG--------NYRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLN 53
Query: 68 RSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR 127
S LQ+L+ EV ++ L H +I++ + + +KT + E + G + +Y + R
Sbjct: 54 SS--SLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGR 109
Query: 128 VDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS 187
+ + ++ RQI+ + Y H + ++HRDLK +N+ ++ + +KI D G +
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQK--FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFG 166
Query: 188 KSAHSVIGTPEFMAPELYE-EDYNE-LVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKV 245
+ G+P + APEL++ + Y+ VDV+S G+ + + + P+ + N ++ ++V
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERV 225
Query: 246 TSGKLPGAFYSIQDLE--AQRFIGRCLVNASKRLSAKELLLDPFL----ASDEVKLLSKT 299
GK FY D E ++F+ ++N SKR + ++++ D ++ DE+
Sbjct: 226 LRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDEL------ 276
Query: 300 KLNQKPFLNETELEKLQLSDDPPRTDMTIT 329
KP+ +E L DP RT++ ++
Sbjct: 277 ----KPY-----VEPLPDYKDPRRTELMVS 297
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 24 DPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
DPN + + E LG GA VYKA ++ G A + +S ++L+ E+ +L
Sbjct: 8 DPNEVWEIVGE-LGDGAFGKVYKAKNKETGALAAAKVIE----TKSEEELEDYIVEIEIL 62
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR-VDIRAIKSWARQILQ 142
+T H I++ ++ D K + I E G + + R + I+ RQ+L+
Sbjct: 63 ATCDHPYIVKLLGAYYH-DGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE 120
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI-LRGSKSAHSVIGTPEFMA 201
L +LHS+ +IHRDLK N+ + G +++ D G++A L+ + S IGTP +MA
Sbjct: 121 ALNFLHSKR--IIHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMA 177
Query: 202 PE------LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
PE + + Y+ D++S G+ ++EM E P+ E NP ++ K+ P
Sbjct: 178 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTLLT 236
Query: 256 -SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLAS 290
S +E + F+ L N R SA +LL PF++S
Sbjct: 237 PSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 273
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 131/261 (50%), Gaps = 23/261 (8%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G+ V A ++ G +VA ++ L + R + L++EV ++ HD+++ Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR----ELLFNEVVIMRDYHHDNVVDMY 108
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+S++ D+ + E G L + + R++ I + +L+ L YLH++ VI
Sbjct: 109 SSYLVGDE--LWVVMEFLEGGALTDI-VTHTRMNEEQIATVCLSVLRALSYLHNQG--VI 163
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEE-DYNELV 213
HRD+K D+I + G++K+ D G A + + ++GTP +MAPE+ Y V
Sbjct: 164 HRDIKSDSILLTSD-GRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 214 DVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLVN- 272
D++S G+ V+EM E PY P Q +++ P ++DL + R ++
Sbjct: 223 DIWSLGIMVIEMIDGEPPYFN-EPPLQAMRRIRDSLPP----RVKDLHKVSSVLRGFLDL 277
Query: 273 -----ASKRLSAKELLLDPFL 288
S+R +A+ELL PFL
Sbjct: 278 MLVREPSQRATAQELLGHPFL 298
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 161/330 (48%), Gaps = 44/330 (13%)
Query: 8 AGAADEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM 67
A +ADE + HIG Y L + + GKG V A + G EVA + +L
Sbjct: 4 ATSADE-QPHIG--------NYRLLKTI-GKGNFAKVKLARHILTGKEVAVRIIDKTQLN 53
Query: 68 RSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR 127
S LQ+L+ EV ++ L H +I++ + + +KT + E + G + +Y + R
Sbjct: 54 SS--SLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGR 109
Query: 128 VDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS 187
+ + ++ RQI+ + Y H + ++HRDLK +N+ ++ + +KI D G +
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQK--FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFG 166
Query: 188 KSAHSVIGTPEFMAPELYE-EDYNE-LVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKV 245
+ G+P + APEL++ + Y+ VDV+S G+ + + + P+ + N ++ ++V
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERV 225
Query: 246 TSGKLPGAFYSIQDLE--AQRFIGRCLVNASKRLSAKELLLDPFL----ASDEVKLLSKT 299
GK FY D E ++F+ ++N SKR + ++++ D ++ DE+
Sbjct: 226 LRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDEL------ 276
Query: 300 KLNQKPFLNETELEKLQLSDDPPRTDMTIT 329
KP+ +E L DP RT++ ++
Sbjct: 277 ----KPY-----VEPLPDYKDPRRTELMVS 297
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 24 DPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
DPN + + E LG GA VYKA ++ G A + +S ++L+ E+ +L
Sbjct: 16 DPNEVWEIVGE-LGDGAFGKVYKAKNKETGALAAAKVIE----TKSEEELEDYIVEIEIL 70
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR-VDIRAIKSWARQILQ 142
+T H I++ ++ D K + I E G + + R + I+ RQ+L+
Sbjct: 71 ATCDHPYIVKLLGAYYH-DGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE 128
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI-LRGSKSAHSVIGTPEFMA 201
L +LHS+ +IHRDLK N+ + G +++ D G++A L+ + S IGTP +MA
Sbjct: 129 ALNFLHSKR--IIHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMA 185
Query: 202 PE------LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
PE + + Y+ D++S G+ ++EM E P+ E NP ++ K+ P
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTLLT 244
Query: 256 -SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLAS 290
S +E + F+ L N R SA +LL PF++S
Sbjct: 245 PSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 144/285 (50%), Gaps = 25/285 (8%)
Query: 8 AGAADEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM 67
A +ADE + HIG Y L + + GKG V A + G EVA + +L
Sbjct: 4 ATSADE-QPHIG--------NYRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLN 53
Query: 68 RSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR 127
S LQ+L+ EV ++ L H +I++ + + +KT + E + G + +Y + R
Sbjct: 54 SS--SLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGR 109
Query: 128 VDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS 187
+ + ++ RQI+ + Y H + ++HRDLK +N+ ++ + +KI D G +
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQK--FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFG 166
Query: 188 KSAHSVIGTPEFMAPELYE-EDYNE-LVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKV 245
+ G+P + APEL++ + Y+ VDV+S G+ + + + P+ + N ++ ++V
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERV 225
Query: 246 TSGKLPGAFYSIQDLE--AQRFIGRCLVNASKRLSAKELLLDPFL 288
GK FY D E ++F+ ++N SKR + ++++ D ++
Sbjct: 226 LRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 160/330 (48%), Gaps = 44/330 (13%)
Query: 8 AGAADEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM 67
A +ADE + HIG Y L + + GKG V A + G EVA + +L
Sbjct: 4 ATSADE-QPHIG--------NYRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLN 53
Query: 68 RSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR 127
S LQ+L+ EV ++ L H +I++ + + +KT + E + G + +Y + R
Sbjct: 54 SS--SLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGR 109
Query: 128 VDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS 187
+ + ++ RQI+ + Y H + ++HRDLK +N+ ++ + +KI D G +
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQK--FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFG 166
Query: 188 KSAHSVIGTPEFMAPELYE-EDYNE-LVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKV 245
+ G P + APEL++ + Y+ VDV+S G+ + + + P+ + N ++ ++V
Sbjct: 167 NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERV 225
Query: 246 TSGKLPGAFYSIQDLE--AQRFIGRCLVNASKRLSAKELLLDPFL----ASDEVKLLSKT 299
GK FY D E ++F+ ++N SKR + ++++ D ++ DE+
Sbjct: 226 LRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDEL------ 276
Query: 300 KLNQKPFLNETELEKLQLSDDPPRTDMTIT 329
KP+ +E L DP RT++ ++
Sbjct: 277 ----KPY-----VEPLPDYKDPRRTELMVS 297
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 160/330 (48%), Gaps = 44/330 (13%)
Query: 8 AGAADEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM 67
A +ADE + HIG Y L + + GKG V A + G EVA + +L
Sbjct: 4 ATSADE-QPHIG--------NYRLLKTI-GKGNFAKVKLARHILTGKEVAVRIIDKTQLN 53
Query: 68 RSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR 127
S LQ+L+ EV ++ L H +I++ + + +KT + E + G + +Y + R
Sbjct: 54 SS--SLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGR 109
Query: 128 VDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS 187
+ + ++ RQI+ + Y H + ++HRDLK +N+ ++ + +KI D G +
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQK--FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFG 166
Query: 188 KSAHSVIGTPEFMAPELYE-EDYNE-LVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKV 245
G+P + APEL++ + Y+ VDV+S G+ + + + P+ + N ++ ++V
Sbjct: 167 NKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERV 225
Query: 246 TSGKLPGAFYSIQDLE--AQRFIGRCLVNASKRLSAKELLLDPFL----ASDEVKLLSKT 299
GK FY D E ++F+ ++N SKR + ++++ D ++ DE+
Sbjct: 226 LRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDEL------ 276
Query: 300 KLNQKPFLNETELEKLQLSDDPPRTDMTIT 329
KP+ +E L DP RT++ ++
Sbjct: 277 ----KPY-----VEPLPDYKDPRRTELMVS 297
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 13/261 (4%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+LGKG+ VY+A G+EVA + + M +QR+ +EV + LKH SI+
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMID-KKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 95 YTSWIDVDQKTFNFITEMFTSGTLREYRK-KYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
Y + D + EM +G + Y K + + + + QI+ G++YLHS
Sbjct: 77 YNYF--EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG-- 132
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAH-SVIGTPEFMAPELYEEDYNEL 212
++HRDL N+ + ++ +KI D GLA L+ H ++ GTP +++PE+ + L
Sbjct: 133 ILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGL 191
Query: 213 -VDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCL- 270
DV+S G + P+ + K V + +F SI EA+ I + L
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSI---EAKDLIHQLLR 248
Query: 271 VNASKRLSAKELLLDPFLASD 291
N + RLS +L PF++ +
Sbjct: 249 RNPADRLSLSSVLDHPFMSRN 269
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 15/264 (5%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+G G+ K + G + W ++ + + + Q L SEV+LL LKH +I+R+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA--EKQMLVSEVNLLRELKHPNIVRY 70
Query: 95 YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIKSWARQILQGLVYLHSR 150
Y ID T + E G L K+ + +D + Q+ L H R
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 151 DP---PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKS-AHSVIGTPEFMAPE-LY 205
V+HRDLK N+F++G VK+GD GLA IL S A + +GTP +M+PE +
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMN 189
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRF 265
YNE D++S G + E+ P++ + ++ K+ GK Y D E
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-KELAGKIREGKFRRIPYRYSD-ELNEI 247
Query: 266 IGRCL-VNASKRLSAKELLLDPFL 288
I R L + R S +E+L +P +
Sbjct: 248 ITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 15/264 (5%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+G G+ K + G + W ++ + + + Q L SEV+LL LKH +I+R+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA--EKQMLVSEVNLLRELKHPNIVRY 70
Query: 95 YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIKSWARQILQGLVYLHSR 150
Y ID T + E G L K+ + +D + Q+ L H R
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 151 DP---PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKS-AHSVIGTPEFMAPE-LY 205
V+HRDLK N+F++G VK+GD GLA IL S A + +GTP +M+PE +
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMN 189
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRF 265
YNE D++S G + E+ P++ + ++ K+ GK Y D E
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-KELAGKIREGKFRRIPYRYSD-ELNEI 247
Query: 266 IGRCL-VNASKRLSAKELLLDPFL 288
I R L + R S +E+L +P +
Sbjct: 248 ITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 28/289 (9%)
Query: 32 FEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
FE++ LG G V+K + G+ +A +L L P ++ E+ +L
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSP 83
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
I+ FY ++ + E G+L + KK R+ + + + +++GL YL
Sbjct: 84 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
+ ++HRD+K NI VN G++K+ D G++ L S A+S +GT +M+PE L
Sbjct: 142 KHK-IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 198
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVT------SGKLPGAFYSIQDLEA 262
Y+ D++S G+ ++EM YP + I++ + KLP +S LE
Sbjct: 199 YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFS---LEF 255
Query: 263 QRFIGRCLV-NASKRLSAKELLLDPFLASDEVK-------LLSKTKLNQ 303
Q F+ +CL+ N ++R K+L++ F+ + + L S LNQ
Sbjct: 256 QDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQ 304
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 132/257 (51%), Gaps = 15/257 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G+ V A ++ G +VA + L + R + L++EV ++ +H +++ Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR----ELLFNEVVIMRDYQHFNVVEMY 108
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
S++ V ++ + + E G L + + R ++ I + +LQ L YLH++ VI
Sbjct: 109 KSYL-VGEELW-VLMEFLQGGALTDIVSQVR-LNEEQIATVCEAVLQALAYLHAQG--VI 163
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEED-YNELV 213
HRD+K D+I + G+VK+ D G A I + ++GTP +MAPE+ Y V
Sbjct: 164 HRDIKSDSILLTLD-GRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 214 DVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQR-FIGRCLV- 271
D++S G+ V+EM E PY +P Q K++ P S + R F+ R LV
Sbjct: 223 DIWSLGIMVIEMVDGEPPYFS-DSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVR 281
Query: 272 NASKRLSAKELLLDPFL 288
+ +R +A+ELL PFL
Sbjct: 282 DPQERATAQELLDHPFL 298
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 144/284 (50%), Gaps = 15/284 (5%)
Query: 21 IETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEV 80
++ DP + E++ GKG+ V+K ID VA +++ +L + D+++ + E+
Sbjct: 16 LKADPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEI 71
Query: 81 HLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQI 140
+LS + ++Y S++ D K + I E G+ + + +D I + R+I
Sbjct: 72 TVLSQCDSPYVTKYYGSYLK-DTKLW-IIMEYLGGGSALDLLEP-GPLDETQIATILREI 128
Query: 141 LQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTPEF 199
L+GL YLHS IHRD+K N+ ++ H G+VK+ D G+A L ++ + +GTP +
Sbjct: 129 LKGLDYLHSEKK--IHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNXFVGTPFW 185
Query: 200 MAPELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQ 258
MAPE+ ++ Y+ D++S G+ +E+ E P+SE +P ++ + P
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNN-PPTLEGNY 243
Query: 259 DLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKL 301
+ F+ CL S R +AKELL F+ + K T+L
Sbjct: 244 SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTEL 287
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+LGKG+ V K D + E A + N+ D + EV LL L H +I++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVI--NKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 95 YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ I D +F + E++T G L + K +R +Q+ G+ Y+H + +
Sbjct: 87 FE--ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--I 142
Query: 155 IHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEEDYNEL 212
+HRDLK +NI + +KI D GL+ + + IGT ++APE+ Y+E
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEK 202
Query: 213 VDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK----LPGAFYSIQDLEAQRFIGR 268
DV+S G+ + + + P+ N I K+V +GK LP + +I D +A+ I +
Sbjct: 203 CDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGKYAFDLP-QWRTISD-DAKDLIRK 259
Query: 269 CLV-NASKRLSAKELLLDPFL 288
L + S R++A + L P++
Sbjct: 260 MLTFHPSLRITATQCLEHPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+LGKG+ V K D + E A + N+ D + EV LL L H +I++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVI--NKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 95 YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ I D +F + E++T G L + K +R +Q+ G+ Y+H + +
Sbjct: 87 FE--ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--I 142
Query: 155 IHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEEDYNEL 212
+HRDLK +NI + +KI D GL+ + + IGT ++APE+ Y+E
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEK 202
Query: 213 VDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK----LPGAFYSIQDLEAQRFIGR 268
DV+S G+ + + + P+ N I K+V +GK LP + +I D +A+ I +
Sbjct: 203 CDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGKYAFDLP-QWRTISD-DAKDLIRK 259
Query: 269 CLV-NASKRLSAKELLLDPFL 288
L + S R++A + L P++
Sbjct: 260 MLTFHPSLRITATQCLEHPWI 280
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+LGKG+ V K D + E A + N+ D + EV LL L H +I++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVI--NKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 95 YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ I D +F + E++T G L + K +R +Q+ G+ Y+H + +
Sbjct: 87 FE--ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--I 142
Query: 155 IHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEEDYNEL 212
+HRDLK +NI + +KI D GL+ + + IGT ++APE+ Y+E
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEK 202
Query: 213 VDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK----LPGAFYSIQDLEAQRFIGR 268
DV+S G+ + + + P+ N I K+V +GK LP + +I D +A+ I +
Sbjct: 203 CDVWSAGVILYILLSGTPPFY-GKNEYDILKRVETGKYAFDLP-QWRTISD-DAKDLIRK 259
Query: 269 CLV-NASKRLSAKELLLDPFL 288
L + S R++A + L P++
Sbjct: 260 MLTFHPSLRITATQCLEHPWI 280
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 121/264 (45%), Gaps = 15/264 (5%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+G G+ K + G + W ++ + + + Q L SEV+LL LKH +I+R+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA--EKQMLVSEVNLLRELKHPNIVRY 70
Query: 95 YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIKSWARQILQGLVYLHSR 150
Y ID T + E G L K+ + +D + Q+ L H R
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 151 DP---PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKS-AHSVIGTPEFMAPE-LY 205
V+HRDLK N+F++G VK+GD GLA IL + A +GTP +M+PE +
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMN 189
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRF 265
YNE D++S G + E+ P++ + ++ K+ GK Y D E
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-KELAGKIREGKFRRIPYRYSD-ELNEI 247
Query: 266 IGRCL-VNASKRLSAKELLLDPFL 288
I R L + R S +E+L +P +
Sbjct: 248 ITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 148/297 (49%), Gaps = 15/297 (5%)
Query: 1 MYSNKQLAGAADEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ 60
M+ + + D ++ + DP + E++ GKG+ V+K ID VA
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMDPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA--- 56
Query: 61 VRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLRE 120
+++ +L + D+++ + E+ +LS + ++Y S++ D K + I E G+ +
Sbjct: 57 IKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLW-IIMEYLGGGSALD 114
Query: 121 YRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGL 180
+ +D I + R+IL+GL YLHS IHRD+K N+ ++ H G+VK+ D G+
Sbjct: 115 LLEP-GPLDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEH-GEVKLADFGV 170
Query: 181 AAILRGSK-SAHSVIGTPEFMAPELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANP 238
A L ++ ++ +GTP +MAPE+ ++ Y+ D++S G+ +E+ E P+SE +P
Sbjct: 171 AGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HP 229
Query: 239 AQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVK 294
++ + P + F+ CL S R +AKELL F+ + K
Sbjct: 230 MKVLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKK 285
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 11 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 60
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIK 134
+L +H +I+ F Y++ + +T+ +L + K+ + + I
Sbjct: 61 GVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI- 114
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI---LRGSKSAH 191
ARQ QG+ YLH++ +IHRDLK +NIF++ L VKIGD GLA + GS
Sbjct: 115 --ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFE 169
Query: 192 SVIGTPEFMAPELY----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ G+ +MAPE+ + Y+ DVY+FG+ + E+ T + PYS N QI V
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 229
Query: 248 GKLPGAFYSIQDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKTKLNQ 303
G L ++ + + R + K+ + L LAS E+ S K+++
Sbjct: 230 GYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHR 284
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 24 DPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
DP + E++ GKG+ V+K ID VA +++ +L + D+++ + E+ +L
Sbjct: 4 DPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEITVL 59
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQG 143
S + ++Y S++ D K + I E G+ + + +D I + R+IL+G
Sbjct: 60 SQCDSPYVTKYYGSYLK-DTKLW-IIMEYLGGGSALDLLEP-GPLDETQIATILREILKG 116
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTPEFMAP 202
L YLHS IHRD+K N+ ++ H G+VK+ D G+A L ++ ++ +GTP +MAP
Sbjct: 117 LDYLHSEKK--IHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 173
Query: 203 ELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLE 261
E+ ++ Y+ D++S G+ +E+ E P+SE +P ++ + P
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNN-PPTLEGNYSKP 231
Query: 262 AQRFIGRCL-VNASKRLSAKELLLDPFLASDEVK 294
+ F+ CL S R +AKELL F+ + K
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFILRNAKK 265
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 152/311 (48%), Gaps = 35/311 (11%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL 86
G Y L + + GKG V A + G EVA + +L S LQ+L+ EV ++ L
Sbjct: 7 GNYRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS--SLQKLFREVRIMKVL 63
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
H +I++ + + +KT + E + G + +Y + + + ++ RQI+ + Y
Sbjct: 64 NHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY 121
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE 206
H + ++HRDLK +N+ ++ + +KI D G + + G+P + APEL++
Sbjct: 122 CHQK--FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ 178
Query: 207 -EDYNE-LVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLE--A 262
+ Y+ VDV+S G+ + + + P+ + N ++ ++V GK FY D E
Sbjct: 179 GKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLL 237
Query: 263 QRFIGRCLVNASKRLSAKELLLDPFL----ASDEVKLLSKTKLNQKPFLNETELEKLQLS 318
++F+ ++N SKR + ++++ D ++ DE+ KP+ +E L
Sbjct: 238 KKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDEL----------KPY-----VEPLPDY 279
Query: 319 DDPPRTDMTIT 329
DP RT++ ++
Sbjct: 280 KDPRRTELMVS 290
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 8 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 57
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIK 134
+L +H +I+ F Y++ + +T+ +L + K+ + + I
Sbjct: 58 GVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI- 111
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI---LRGSKSAH 191
ARQ QG+ YLH++ +IHRDLK +NIF++ L VKIGD GLA + GS
Sbjct: 112 --ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFE 166
Query: 192 SVIGTPEFMAPELY----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ G+ +MAPE+ + Y+ DVY+FG+ + E+ T + PYS N QI V
Sbjct: 167 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 226
Query: 248 GKLPGAFYSIQDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKTKLNQ 303
G L ++ + + R + K+ + L LAS E+ S K+++
Sbjct: 227 GYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHR 281
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 126/275 (45%), Gaps = 32/275 (11%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR-- 93
LG GA VYKA ++ V A + +S ++L+ E+ +L++ H +I++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVID----TKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 94 --FY---TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
FY WI ++ F + E + I+ + +Q L L YLH
Sbjct: 101 DAFYYENNLWILIE-----FCAGGAVDAVMLELERPLTESQIQVV---CKQTLDALNYLH 152
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI-LRGSKSAHSVIGTPEFMAPELY-- 205
D +IHRDLK NI G +K+ D G++A R + S IGTP +MAPE+
Sbjct: 153 --DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 206 ----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPG-AFYSIQDL 260
+ Y+ DV+S G+ ++EM E P+ E NP ++ K+ + P A S
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSS 268
Query: 261 EAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVK 294
+ F+ +CL N R + +LL PF+ D K
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 303
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 126/275 (45%), Gaps = 32/275 (11%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR-- 93
LG GA VYKA ++ V A + +S ++L+ E+ +L++ H +I++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVID----TKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 94 --FY---TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
FY WI ++ F + E + I+ + +Q L L YLH
Sbjct: 101 DAFYYENNLWILIE-----FCAGGAVDAVMLELERPLTESQIQVV---CKQTLDALNYLH 152
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI-LRGSKSAHSVIGTPEFMAPELY-- 205
D +IHRDLK NI G +K+ D G++A R + S IGTP +MAPE+
Sbjct: 153 --DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 206 ----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPG-AFYSIQDL 260
+ Y+ DV+S G+ ++EM E P+ E NP ++ K+ + P A S
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSS 268
Query: 261 EAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVK 294
+ F+ +CL N R + +LL PF+ D K
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 303
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 35/263 (13%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 10 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 59
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY-RKKYRRVDIRAIKSWA 137
+L +H +I+ F Y++ + +T+ +L + + +++ + A
Sbjct: 60 GVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIA 114
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI---LRGSKSAHSVI 194
RQ +G+ YLH++ +IHRDLK +NIF++ VKIGD GLA + GS +
Sbjct: 115 RQTARGMDYLHAKS--IIHRDLKSNNIFLHED-NTVKIGDFGLATVKSRWSGSHQFEQLS 171
Query: 195 GTPEFMAPELYE----EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL 250
G+ +MAPE+ Y+ DVY+FG+ + E+ T + PYS N QI + V G L
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
Query: 251 PGAFYSIQD---LEAQRFIGRCL 270
++ +R + CL
Sbjct: 232 SPDLSKVRSNCPKRMKRLMAECL 254
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 41/292 (14%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 11 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 60
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIK 134
+L +H +I+ F Y++ + +T+ +L + K+ + + I
Sbjct: 61 GVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI- 114
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI---LRGSKSAH 191
ARQ QG+ YLH++ +IHRDLK +NIF++ L VKIGD GLA + GS
Sbjct: 115 --ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFE 169
Query: 192 SVIGTPEFMAPELY----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ G+ +MAPE+ + Y+ DVY+FG+ + E+ T + PYS N QI V
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 229
Query: 248 GKLPGAFYSIQDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKT 299
G L ++ + + R + K+ + L LAS ++LL+++
Sbjct: 230 GYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILAS--IELLARS 278
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G TVYK +++ GV VA +V+L+ +P R E+ L+ LKH++I+R
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR---EISLMKELKHENIVR 67
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKY------RRVDIRAIKSWARQILQGLVYL 147
Y ++ T F F L++Y R +++ +K + Q+LQGL +
Sbjct: 68 LYDVIHTENKLTLVF---EFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPELY- 205
H ++HRDLK N+ +N GQ+K+GD GLA A + S + T + AP++
Sbjct: 125 HENK--ILHRDLKPQNLLINKR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLM 181
Query: 206 -EEDYNELVDVYSFGMCVLEMFT 227
Y+ +D++S G + EM T
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMIT 204
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 50/291 (17%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR----SPDDLQRLYSEVHLLSTLKHDSI 91
+G G+ TVYK W+ ++++ +P+ Q +EV +L +H +I
Sbjct: 44 IGSGSFGTVYKG---------KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNI 94
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYR-------KKYRRVDIRAIKSWARQILQGL 144
+ F + + +T+ +L ++ + ++ +DI ARQ QG+
Sbjct: 95 LLFMGY---MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDI------ARQTAQGM 145
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI---LRGSKSAHSVIGTPEFMA 201
YLH+++ +IHRD+K +NIF++ L VKIGD GLA + GS+ G+ +MA
Sbjct: 146 DYLHAKN--IIHRDMKSNNIFLHEGL-TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 202 PELYE-EDYNELV---DVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSI 257
PE+ +D N DVYS+G+ + E+ T E PYS N QI V G Y+
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG------YAS 256
Query: 258 QDL-----EAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKTKLNQ 303
DL + + R + + K++ + L L+S E+ S K+N+
Sbjct: 257 PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINR 307
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 41/292 (14%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 6 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 55
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIK 134
+L +H +I+ F Y++ + +T+ +L + K+ + + I
Sbjct: 56 GVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI- 109
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI---LRGSKSAH 191
ARQ QG+ YLH++ +IHRDLK +NIF++ L VKIGD GLA + GS
Sbjct: 110 --ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFE 164
Query: 192 SVIGTPEFMAPELY----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ G+ +MAPE+ + Y+ DVY+FG+ + E+ T + PYS N QI V
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
Query: 248 GKLPGAFYSIQDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKT 299
G L ++ + + R + K+ + L LAS ++LL+++
Sbjct: 225 GYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILAS--IELLARS 273
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 32 FEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
FE++ LG G V+K + G+ +A +L L P ++ E+ +L
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
I+ FY ++ + E G+L + KK R+ + + + +++GL YL
Sbjct: 65 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
+ ++HRD+K NI VN G++K+ D G++ L S A+S +GT +M+PE L
Sbjct: 123 KHK-IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 179
Query: 209 YNELVDVYSFGMCVLEMFTCEYPY------SECANPAQIYKKV------TSGKLPGAFYS 256
Y+ D++S G+ ++EM YP + P I++ + KLP +S
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFS 239
Query: 257 IQDLEAQRFIGRCLV-NASKRLSAKELLLDPFLASDEVK-------LLSKTKLNQ 303
LE Q F+ +CL+ N ++R K+L++ F+ + + L S LNQ
Sbjct: 240 ---LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQ 291
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 33 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 82
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIK 134
+L +H +I+ F Y++ + +T+ +L + K+ + + I
Sbjct: 83 GVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI- 136
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI---LRGSKSAH 191
ARQ QG+ YLH++ +IHRDLK +NIF++ L VKIGD GLA + GS
Sbjct: 137 --ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFE 191
Query: 192 SVIGTPEFMAPELY----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ G+ +MAPE+ + Y+ DVY+FG+ + E+ T + PYS N QI V
Sbjct: 192 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 251
Query: 248 GKLPGAFYSIQDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKTKLNQ 303
G L ++ + + R + K+ + L LAS E+ S K+++
Sbjct: 252 GYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHR 306
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 34 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 83
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIK 134
+L +H +I+ F Y++ + +T+ +L + K+ + + I
Sbjct: 84 GVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI- 137
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI---LRGSKSAH 191
ARQ QG+ YLH++ +IHRDLK +NIF++ L VKIGD GLA + GS
Sbjct: 138 --ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFE 192
Query: 192 SVIGTPEFMAPELY----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ G+ +MAPE+ + Y+ DVY+FG+ + E+ T + PYS N QI V
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 252
Query: 248 GKLPGAFYSIQDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKTKLNQ 303
G L ++ + + R + K+ + L LAS E+ S K+++
Sbjct: 253 GYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHR 307
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 139/274 (50%), Gaps = 15/274 (5%)
Query: 24 DPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
DP + E++ GKG+ V+K ID VA +++ +L + D+++ + E+ +L
Sbjct: 4 DPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEITVL 59
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQG 143
S + ++Y S++ D K + I E G+ + + +D I + R+IL+G
Sbjct: 60 SQCDSPYVTKYYGSYLK-DTKLW-IIMEYLGGGSALDLLEP-GPLDETQIATILREILKG 116
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTPEFMAP 202
L YLHS IHRD+K N+ ++ H G+VK+ D G+A L ++ + +GTP +MAP
Sbjct: 117 LDYLHSEKK--IHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 173
Query: 203 ELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLE 261
E+ ++ Y+ D++S G+ +E+ E P+SE +P ++ + P
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNN-PPTLEGNYSKP 231
Query: 262 AQRFIGRCL-VNASKRLSAKELLLDPFLASDEVK 294
+ F+ CL S R +AKELL F+ + K
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFILRNAKK 265
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 32 FEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
FE++ LG G V+K + G+ +A +L L P ++ E+ +L
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSP 67
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
I+ FY ++ + E G+L + KK R+ + + + +++GL YL
Sbjct: 68 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
+ ++HRD+K NI VN G++K+ D G++ L + A+ +GT +M+PE L
Sbjct: 126 KHK-IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTH 182
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKV------TSGKLPGAFYSIQDLEA 262
Y+ D++S G+ ++EM YP P I++ + KLP A +S LE
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYPRP----PMAIFELLDYIVNEPPPKLPSAVFS---LEF 235
Query: 263 QRFIGRCLV-NASKRLSAKELLLDPFLASDEVK-------LLSKTKLNQ 303
Q F+ +CL+ N ++R K+L++ F+ + + L S LNQ
Sbjct: 236 QDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQ 284
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 136/292 (46%), Gaps = 41/292 (14%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 6 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 55
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIK 134
+L +H +I+ F Y++ +T+ +L + K+ + + I
Sbjct: 56 GVLRKTRHVNILLFMGYST-----APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI- 109
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI---LRGSKSAH 191
ARQ QG+ YLH++ +IHRDLK +NIF++ L VKIGD GLA + GS
Sbjct: 110 --ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFE 164
Query: 192 SVIGTPEFMAPELY----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ G+ +MAPE+ + Y+ DVY+FG+ + E+ T + PYS N QI V
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
Query: 248 GKLPGAFYSIQDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKT 299
G L ++ + + R + K+ + L LAS ++LL+++
Sbjct: 225 GYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILAS--IELLARS 273
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 13 RHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 68
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LREY +K++ R+D + + QI +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICK 128
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 129 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 235
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 25/282 (8%)
Query: 8 AGAADEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM 67
A +ADE + HIG Y L + +GKG V A + G EVA + +L
Sbjct: 4 ATSADE-QPHIG--------NYRLLK-TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN 53
Query: 68 RSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR 127
S LQ+L+ EV + L H +I++ + + +KT + E + G + +Y + R
Sbjct: 54 SS--SLQKLFREVRIXKVLNHPNIVKLFE--VIETEKTLYLVXEYASGGEVFDYLVAHGR 109
Query: 128 VDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS 187
+ ++ RQI+ + Y H + ++HRDLK +N+ ++ +KI D G +
Sbjct: 110 XKEKEARAKFRQIVSAVQYCHQK--FIVHRDLKAENLLLDADX-NIKIADFGFSNEFTFG 166
Query: 188 KSAHSVIGTPEFMAPELYE-EDYNE-LVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKV 245
+ G P + APEL++ + Y+ VDV+S G+ + + + P+ + N ++ ++V
Sbjct: 167 NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERV 225
Query: 246 TSGKLPGAFYSIQDLEA--QRFIGRCLVNASKRLSAKELLLD 285
GK FY D E ++F+ ++N SKR + +++ D
Sbjct: 226 LRGKYRIPFYXSTDCENLLKKFL---ILNPSKRGTLEQIXKD 264
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 35/263 (13%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 22 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 71
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY-RKKYRRVDIRAIKSWA 137
+L +H +I+ F Y++ + +T+ +L + + +++ + A
Sbjct: 72 GVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIA 126
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA---AILRGSKSAHSVI 194
RQ +G+ YLH++ +IHRDLK +NIF++ VKIGD GLA + GS +
Sbjct: 127 RQTARGMDYLHAKS--IIHRDLKSNNIFLHED-NTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 195 GTPEFMAPELYE----EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL 250
G+ +MAPE+ Y+ DVY+FG+ + E+ T + PYS N QI + V G L
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 251 PGAFYSIQD---LEAQRFIGRCL 270
++ +R + CL
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECL 266
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 125/275 (45%), Gaps = 32/275 (11%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR-- 93
LG GA VYKA ++ V A + +S ++L+ E+ +L++ H +I++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVID----TKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 94 --FY---TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
FY WI ++ F + E + I+ + +Q L L YLH
Sbjct: 101 DAFYYENNLWILIE-----FCAGGAVDAVMLELERPLTESQIQVV---CKQTLDALNYLH 152
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI-LRGSKSAHSVIGTPEFMAPELY-- 205
D +IHRDLK NI G +K+ D G++A R + IGTP +MAPE+
Sbjct: 153 --DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 206 ----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPG-AFYSIQDL 260
+ Y+ DV+S G+ ++EM E P+ E NP ++ K+ + P A S
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSS 268
Query: 261 EAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVK 294
+ F+ +CL N R + +LL PF+ D K
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 303
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 108/220 (49%), Gaps = 48/220 (21%)
Query: 34 EVLGKG----AMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLY-SEVHLLSTLKH 88
EVLGKG A+K ++ EV+ + EL+R ++ QR + EV ++ L+H
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVM---------VMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKY-------RRVDIRAIKSWARQIL 141
++++F + K NFITE GTLR K +RV S+A+ I
Sbjct: 67 PNVLKFIG--VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRV------SFAKDIA 118
Query: 142 QGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSA----------- 190
G+ YLHS + +IHRDL N V + V + D GLA ++ K+
Sbjct: 119 SGMAYLHSMN--IIHRDLNSHNCLVREN-KNVVVADFGLARLMVDEKTQPEGLRSLKKPD 175
Query: 191 ----HSVIGTPEFMAPELYE-EDYNELVDVYSFGMCVLEM 225
++V+G P +MAPE+ Y+E VDV+SFG+ + E+
Sbjct: 176 RKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 126/259 (48%), Gaps = 14/259 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG Y+ I ++ EV +V ++ P +++ +E+ + +L + ++ F+
Sbjct: 50 LGKGGFAKCYE-ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 96 TSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ D D F ++ E+ +L E K+ + V + + RQ +QG+ YLH+ V
Sbjct: 109 GFFEDDD---FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--V 163
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLGLAAILR-GSKSAHSVIGTPEFMAPE-LYEEDYNEL 212
IHRDLK N+F+N + VKIGD GLA + + ++ GTP ++APE L ++ ++
Sbjct: 164 IHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFE 222
Query: 213 VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV 271
VD++S G + + + P+ + C I K +P + +R +
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLH---A 279
Query: 272 NASKRLSAKELLLDPFLAS 290
+ + R S ELL D F S
Sbjct: 280 DPTLRPSVAELLTDEFFTS 298
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 41/292 (14%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 6 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 55
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIK 134
+L +H +I+ F Y++ + +T+ +L + K+ + + I
Sbjct: 56 GVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI- 109
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA---AILRGSKSAH 191
ARQ QG+ YLH++ +IHRDLK +NIF++ L VKIGD GLA + GS
Sbjct: 110 --ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFE 164
Query: 192 SVIGTPEFMAPELY----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ G+ +MAPE+ + Y+ DVY+FG+ + E+ T + PYS N QI V
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
Query: 248 GKLPGAFYSIQDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKT 299
G L ++ + + R + K+ + L LAS ++LL+++
Sbjct: 225 GYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILAS--IELLARS 273
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 34 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 83
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIK 134
+L +H +I+ F Y++ + +T+ +L + K+ + + I
Sbjct: 84 GVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI- 137
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA---AILRGSKSAH 191
ARQ QG+ YLH++ +IHRDLK +NIF++ L VKIGD GLA + GS
Sbjct: 138 --ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFE 192
Query: 192 SVIGTPEFMAPELY----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ G+ +MAPE+ + Y+ DVY+FG+ + E+ T + PYS N QI V
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 252
Query: 248 GKLPGAFYSIQDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKTKLNQ 303
G L ++ + + R + K+ + L LAS E+ S K+++
Sbjct: 253 GYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHR 307
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 26 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 75
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIK 134
+L +H +I+ F Y++ + +T+ +L + K+ + + I
Sbjct: 76 GVLRKTRHVNILLFMGYST-----KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI- 129
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA---AILRGSKSAH 191
ARQ QG+ YLH++ +IHRDLK +NIF++ L VKIGD GLA + GS
Sbjct: 130 --ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFE 184
Query: 192 SVIGTPEFMAPELY----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ G+ +MAPE+ + Y+ DVY+FG+ + E+ T + PYS N QI V
Sbjct: 185 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 244
Query: 248 GKLPGAFYSIQDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKTKLNQ 303
G L ++ + + R + K+ + L LAS E+ S K+++
Sbjct: 245 GYLSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHR 299
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 14 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 69
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 129
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 130 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 186
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 236
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 96
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 156
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 157 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 213
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 263
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 68
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 128
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 129 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 235
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 9 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 64
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 124
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 125 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 181
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 231
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 16 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 71
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 131
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 132 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 188
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 238
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 35/263 (13%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQ----VRLNELMRSPDDLQRLYSEV 80
P+G+ + + + G G+ TVYK W+ LN +P LQ +EV
Sbjct: 22 PDGQITVGQRI-GSGSFGTVYKG---------KWHGDVAVKMLNVTAPTPQQLQAFKNEV 71
Query: 81 HLLSTLKHDSIIRF--YTSWIDVDQKTFNFITEMFTSGTLREY-RKKYRRVDIRAIKSWA 137
+L +H +I+ F Y++ +T+ +L + + +++ + A
Sbjct: 72 GVLRKTRHVNILLFMGYST-----APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIA 126
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA---AILRGSKSAHSVI 194
RQ +G+ YLH++ +IHRDLK +NIF++ VKIGD GLA + GS +
Sbjct: 127 RQTARGMDYLHAKS--IIHRDLKSNNIFLHED-NTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 195 GTPEFMAPELYE----EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL 250
G+ +MAPE+ Y+ DVY+FG+ + E+ T + PYS N QI + V G L
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 251 PGAFYSIQD---LEAQRFIGRCL 270
++ +R + CL
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECL 266
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 15 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 70
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 130
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 131 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 187
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 237
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 8 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 63
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 124 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 180
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 17 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 72
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 132
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 133 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 189
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 239
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 16/260 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG Y+ I ++ EV +V ++ P +++ +E+ + +L + ++ F+
Sbjct: 50 LGKGGFAKCYE-ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 96 TSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ D D F ++ E+ +L E K+ + V + + RQ +QG+ YLH+ V
Sbjct: 109 GFFEDDD---FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--V 163
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLGLAAILR-GSKSAHSVIGTPEFMAPE-LYEEDYNEL 212
IHRDLK N+F+N + VKIGD GLA + + + GTP ++APE L ++ ++
Sbjct: 164 IHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFE 222
Query: 213 VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCL- 270
VD++S G + + + P+ + C I K +P + A I R L
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV----ASALIRRMLH 278
Query: 271 VNASKRLSAKELLLDPFLAS 290
+ + R S ELL D F S
Sbjct: 279 ADPTLRPSVAELLTDEFFTS 298
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 125/259 (48%), Gaps = 14/259 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG Y+ I ++ EV +V ++ P +++ +E+ + +L + ++ F+
Sbjct: 34 LGKGGFAKCYE-ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 96 TSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ D D F ++ E+ +L E K+ + V + + RQ +QG+ YLH+ V
Sbjct: 93 GFFEDDD---FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--V 147
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLGLAAILR-GSKSAHSVIGTPEFMAPE-LYEEDYNEL 212
IHRDLK N+F+N + VKIGD GLA + + + GTP ++APE L ++ ++
Sbjct: 148 IHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFE 206
Query: 213 VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV 271
VD++S G + + + P+ + C I K +P + +R +
Sbjct: 207 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLH---A 263
Query: 272 NASKRLSAKELLLDPFLAS 290
+ + R S ELL D F S
Sbjct: 264 DPTLRPSVAELLTDEFFTS 282
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 65
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 126 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 232
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 65
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 126 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 232
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 16/260 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG Y+ I ++ EV +V ++ P +++ +E+ + +L + ++ F+
Sbjct: 50 LGKGGFAKCYE-ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 96 TSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ D D F ++ E+ +L E K+ + V + + RQ +QG+ YLH+ V
Sbjct: 109 GFFEDDD---FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--V 163
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLGLAAILR-GSKSAHSVIGTPEFMAPE-LYEEDYNEL 212
IHRDLK N+F+N + VKIGD GLA + + + GTP ++APE L ++ ++
Sbjct: 164 IHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFE 222
Query: 213 VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCL- 270
VD++S G + + + P+ + C I K +P + A I R L
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV----ASALIRRMLH 278
Query: 271 VNASKRLSAKELLLDPFLAS 290
+ + R S ELL D F S
Sbjct: 279 ADPTLRPSVAELLTDEFFTS 298
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 83
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 144 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 250
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 83
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 144 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 250
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 141/300 (47%), Gaps = 38/300 (12%)
Query: 31 LFEEVLGKGAMKTVY----KAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLS-T 85
+ ++LGKG+ V+ K ++ ++ V L + DD++ E +LS
Sbjct: 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD-----DDVECTMVEKRVLSLA 74
Query: 86 LKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLV 145
+H + + ++ ++ F+ E G L + + + D+ +A +I+ GL
Sbjct: 75 WEHPFLTHMFCTF--QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 146 YLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPE- 203
+LHS+ +++RDLK DNI ++ G +KI D G+ + G + GTP+++APE
Sbjct: 133 FLHSKG--IVYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEI 189
Query: 204 LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
L + YN VD +SFG+ + EM + P+ + +++ + ++ FY
Sbjct: 190 LLGQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEELFHSI---RMDNPFYP------- 238
Query: 264 RFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPFLNETELEKLQLSD-DPP 322
R++ + AK+LL+ F+ E +L + + Q P E E+L+ + DPP
Sbjct: 239 RWLEK---------EAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPP 289
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 140/297 (47%), Gaps = 38/297 (12%)
Query: 34 EVLGKGAMKTVY----KAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLS-TLKH 88
++LGKG+ V+ K ++ ++ V L + DD++ E +LS +H
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD-----DDVECTMVEKRVLSLAWEH 78
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
+ + ++ ++ F+ E G L + + + D+ +A +I+ GL +LH
Sbjct: 79 PFLTHMFCTF--QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPE-LYE 206
S+ +++RDLK DNI ++ G +KI D G+ + G + GTP+++APE L
Sbjct: 137 SKG--IVYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 207 EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFI 266
+ YN VD +SFG+ + EM + P+ + +++ + ++ FY R++
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEELFHSI---RMDNPFYP-------RWL 242
Query: 267 GRCLVNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPFLNETELEKLQLSD-DPP 322
+ AK+LL+ F+ E +L + + Q P E E+L+ + DPP
Sbjct: 243 EK---------EAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPP 290
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 14/259 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG ++ I + EV ++ L+ P +++ E+ + +L H ++ F+
Sbjct: 25 LGKGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 96 TSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ D D F F+ E+ +L E K+ + + + + RQI+ G YLH V
Sbjct: 84 GFFEDND---FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 138
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLGLAAILR-GSKSAHSVIGTPEFMAPE-LYEEDYNEL 212
IHRDLK N+F+N L +VKIGD GLA + + ++ GTP ++APE L ++ ++
Sbjct: 139 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 213 VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV 271
VDV+S G + + + P+ + C + K +P + Q+ +
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ---T 254
Query: 272 NASKRLSAKELLLDPFLAS 290
+ + R + ELL D F S
Sbjct: 255 DPTARPTINELLNDEFFTS 273
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 14/259 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG ++ I + EV ++ L+ P +++ E+ + +L H ++ F+
Sbjct: 25 LGKGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 96 TSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ D D F F+ E+ +L E K+ + + + + RQI+ G YLH V
Sbjct: 84 GFFEDND---FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 138
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLGLAAILR-GSKSAHSVIGTPEFMAPE-LYEEDYNEL 212
IHRDLK N+F+N L +VKIGD GLA + + ++ GTP ++APE L ++ ++
Sbjct: 139 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 213 VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV 271
VDV+S G + + + P+ + C + K +P + Q+ +
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ---T 254
Query: 272 NASKRLSAKELLLDPFLAS 290
+ + R + ELL D F S
Sbjct: 255 DPTARPTINELLNDEFFTS 273
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 14/259 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG ++ I + EV ++ L+ P +++ E+ + +L H ++ F+
Sbjct: 29 LGKGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 96 TSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ D D F F+ E+ +L E K+ + + + + RQI+ G YLH V
Sbjct: 88 GFFEDND---FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 142
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLGLAAILR-GSKSAHSVIGTPEFMAPE-LYEEDYNEL 212
IHRDLK N+F+N L +VKIGD GLA + + ++ GTP ++APE L ++ ++
Sbjct: 143 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 213 VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV 271
VDV+S G + + + P+ + C + K +P + Q+ +
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ---T 258
Query: 272 NASKRLSAKELLLDPFLAS 290
+ + R + ELL D F S
Sbjct: 259 DPTARPTINELLNDEFFTS 277
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 45/274 (16%)
Query: 9 GAADEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR 68
G + H+ I + NGRY AMK + K I VRL ++
Sbjct: 15 GTGSFGRVHL--IRSRHNGRYY---------AMKVLKKEI-----------VVRLKQVEH 52
Query: 69 SPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRV 128
+ D +RL +LS + H IIR + ++ D Q I + G L +K +R
Sbjct: 53 TND--ERL-----MLSIVTHPFIIRMWGTFQDAQQ--IFMIMDYIEGGELFSLLRKSQRF 103
Query: 129 DIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK 188
K +A ++ L YLHS+D +I+RDLK +NI ++ + G +KI D G A +
Sbjct: 104 PNPVAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDKN-GHIKITDFGFAKYV--PD 158
Query: 189 SAHSVIGTPEFMAPELYE-EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ + GTP+++APE+ + YN+ +D +SFG+ + EM P+ + +N + Y+K+ +
Sbjct: 159 VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD-SNTMKTYEKILN 217
Query: 248 GKL---PGAFYSIQDLEAQRFIGRCLVNASKRLS 278
+L P ++DL R I R L S+RL
Sbjct: 218 AELRFPPFFNEDVKDL-LSRLITRDL---SQRLG 247
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 65
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 126 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF 182
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 232
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 14/259 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG ++ I + EV ++ L+ P +++ E+ + +L H ++ F+
Sbjct: 49 LGKGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 96 TSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ D D F F+ E+ +L E K+ + + + + RQI+ G YLH V
Sbjct: 108 GFFEDND---FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 162
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI-GTPEFMAPE-LYEEDYNEL 212
IHRDLK N+F+N L +VKIGD GLA + V+ GTP ++APE L ++ ++
Sbjct: 163 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 213 VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV 271
VDV+S G + + + P+ + C + K +P + Q+ +
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ---T 278
Query: 272 NASKRLSAKELLLDPFLAS 290
+ + R + ELL D F S
Sbjct: 279 DPTARPTINELLNDEFFTS 297
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 117/232 (50%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 11 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 66
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y +K++ R+D + + QI +
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHR+L NI V +VKIGD GL +L K + V E
Sbjct: 127 GMEYLGTKR--YIHRNLATRNILVENE-NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF 183
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 233
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 14/259 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG ++ I + EV ++ L+ P +++ E+ + +L H ++ F+
Sbjct: 47 LGKGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 96 TSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ D D F F+ E+ +L E K+ + + + + RQI+ G YLH V
Sbjct: 106 GFFEDND---FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 160
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI-GTPEFMAPE-LYEEDYNEL 212
IHRDLK N+F+N L +VKIGD GLA + V+ GTP ++APE L ++ ++
Sbjct: 161 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 213 VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV 271
VDV+S G + + + P+ + C + K +P + Q+ +
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ---T 276
Query: 272 NASKRLSAKELLLDPFLAS 290
+ + R + ELL D F S
Sbjct: 277 DPTARPTINELLNDEFFTS 295
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 14/259 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG ++ I + EV ++ L+ P +++ E+ + +L H ++ F+
Sbjct: 23 LGKGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 96 TSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
+ D D F F+ E+ +L E K+ + + + + RQI+ G YLH V
Sbjct: 82 GFFEDND---FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--V 136
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI-GTPEFMAPE-LYEEDYNEL 212
IHRDLK N+F+N L +VKIGD GLA + V+ GTP ++APE L ++ ++
Sbjct: 137 IHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 213 VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV 271
VDV+S G + + + P+ + C + K +P + Q+ +
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ---T 252
Query: 272 NASKRLSAKELLLDPFLAS 290
+ + R + ELL D F S
Sbjct: 253 DPTARPTINELLNDEFFTS 271
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 137/281 (48%), Gaps = 34/281 (12%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E +GKG+ V+K ID VA +++ +L + D+++ + E+ +LS + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVA---IKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTK 85
Query: 94 FYTS-------WIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
+Y S WI ++ ++ +G E++ I + ++IL+GL Y
Sbjct: 86 YYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQ----------IATMLKEILKGLDY 135
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTPEFMAPELY 205
LHS IHRD+K N+ ++ G VK+ D G+A L ++ ++ +GTP +MAPE+
Sbjct: 136 LHSEKK--IHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 192
Query: 206 EED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLP---GAFYSIQDLE 261
++ Y+ D++S G+ +E+ E P S+ +P ++ + P G F
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPPNSDM-HPMRVLFLIPKNNPPTLVGDFTK----S 247
Query: 262 AQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKL 301
+ FI CL + S R +AKELL F+ + K T+L
Sbjct: 248 FKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTEL 288
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 22/238 (9%)
Query: 21 IETDPNGRYGL----FEEVLGKGAMKTVY----KAIDEVLGVEVAWNQVRLNELMRSPDD 72
I + + R G+ F VLGKG+ V K ++ V+V V L + DD
Sbjct: 12 IGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD-----DD 66
Query: 73 LQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRA 132
++ +E +LS ++ + + F F+ E G L + +K RR D
Sbjct: 67 VECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF-FVMEFVNGGDLMFHIQKSRRFDEAR 125
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA--AILRGSKSA 190
+ +A +I+ L++LH D +I+RDLK DN+ ++ H G K+ D G+ I G +A
Sbjct: 126 ARFYAAEIISALMFLH--DKGIIYRDLKLDNVLLD-HEGHCKLADFGMCKEGICNGVTTA 182
Query: 191 HSVIGTPEFMAPELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ GTP+++APE+ +E Y VD ++ G+ + EM P+ E N +++ + +
Sbjct: 183 -TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF-EAENEDDLFEAILN 238
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 36 LGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
LGKG +V Y + + G VA Q++ + PD + E+ +L L D I
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFI 73
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLHSR 150
+++ +++ + E SG LR++ +++R R+D + ++ QI +G+ YL SR
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 133
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI---GTPEF-MAPE-LY 205
+HRDL NI V VKI D GLA +L K + V +P F APE L
Sbjct: 134 R--CVHRDLAARNILVESE-AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 190
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTS 247
+ ++ DV+SFG+ + E+FT Y C+ A+ + + S
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFT--YCDKSCSPSAEFLRMMGS 230
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 38/283 (13%)
Query: 32 FEEVLGK-GAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
F E++G+ G VYKA ++ V A + +S ++L+ E+ +L++ H +
Sbjct: 13 FWEIIGELGDFGKVYKAQNKETSVLAAAKVID----TKSEEELEDYMVEIDILASCDHPN 68
Query: 91 IIR----FY---TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQG 143
I++ FY WI ++ F + E + I+ + +Q L
Sbjct: 69 IVKLLDAFYYENNLWILIE-----FCAGGAVDAVMLELERPLTESQIQVV---CKQTLDA 120
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSA----HSVIGTPEF 199
L YLH D +IHRDLK NI G +K+ D G++A + +++ S IGTP +
Sbjct: 121 LNYLH--DNKIIHRDLKAGNILFTLD-GDIKLADFGVSA--KNTRTXIQRRDSFIGTPYW 175
Query: 200 MAPELY------EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPG- 252
MAPE+ + Y+ DV+S G+ ++EM E P+ E NP ++ K+ + P
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTL 234
Query: 253 AFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVK 294
A S + F+ +CL N R + +LL PF+ D K
Sbjct: 235 AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 277
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A + +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 78
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K R D + ++ ++ L Y HS+ VI
Sbjct: 79 GYFHDATR--VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR--VI 134
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 135 HRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E P+ E + Y++++ ++ F A+ I R L NA
Sbjct: 193 LWSLGVLCYEFLVGMPPF-EAHTYQETYRRIS--RVEFTFPDFVTEGARDLISRLLKHNA 249
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+RL+ E+L P++ ++ K
Sbjct: 250 SQRLTLAEVLEHPWIKANSSK 270
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 114/232 (49%), Gaps = 19/232 (8%)
Query: 28 RYGLFEEVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL 83
R+ F + LGKG +V Y + + G VA +++ + + + L+ E+ +L
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEIL 68
Query: 84 STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKY-RRVDIRAIKSWARQILQ 142
+L+HD+I+++ ++ I E G+LR+Y + + R+D + + QI +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICK 128
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPE---- 198
G+ YL ++ IHRDL NI V +VKIGD GL +L K V E
Sbjct: 129 GMEYLGTKR--YIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 199 FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
+ APE L E ++ DV+SFG+ + E+FT Y + PA+ + + + K
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDK 235
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 36 LGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
LGKG +V Y + + G VA Q++ + PD + E+ +L L D I
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFI 74
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLHSR 150
+++ +++ + E SG LR++ +++R R+D + ++ QI +G+ YL SR
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 134
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI---GTPEF-MAPE-LY 205
+HRDL NI V VKI D GLA +L K + V +P F APE L
Sbjct: 135 R--CVHRDLAARNILVESE-AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 191
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYK 243
+ ++ DV+SFG+ + E+FT Y C+ A+ +
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFT--YCDKSCSPSAEFLR 227
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 19/218 (8%)
Query: 36 LGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
LGKG +V Y + + G VA Q++ + PD + E+ +L L D I
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFI 86
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLHSR 150
+++ +++ + E SG LR++ +++R R+D + ++ QI +G+ YL SR
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 146
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI---GTPEF-MAPE-LY 205
+HRDL NI V VKI D GLA +L K + V +P F APE L
Sbjct: 147 R--CVHRDLAARNILVESE-AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYK 243
+ ++ DV+SFG+ + E+FT Y C+ A+ +
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFT--YCDKSCSPSAEFLR 239
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 17/254 (6%)
Query: 9 GAADEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR 68
G E + H G ++ G Y + + LG G V E+ G +VA ++ + +R
Sbjct: 1 GPMAEKQKHDGRVKI---GHY-ILGDTLGVGTFGKVKVGKHELTGHKVAV-KILNRQKIR 55
Query: 69 SPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRV 128
S D + ++ E+ L +H II+ Y I F + E + G L +Y K R+
Sbjct: 56 SLDVVGKIRREIQNLKLFRHPHIIKLYQV-ISTPSDIF-MVMEYVSGGELFDYICKNGRL 113
Query: 129 DIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK 188
D + + +QIL G+ Y H V+HRDLK +N+ ++ H+ KI D GL+ ++ +
Sbjct: 114 DEKESRRLFQQILSGVDYCHRH--MVVHRDLKPENVLLDAHMN-AKIADFGLSNMMSDGE 170
Query: 189 SAHSVIGTPEFMAPELYEEDY--NELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVT 246
G+P + APE+ VD++S G+ + + P+ + P ++KK+
Sbjct: 171 FLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKIC 229
Query: 247 SGKLPGAFYSIQDL 260
G FY+ Q L
Sbjct: 230 D----GIFYTPQYL 239
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 22/258 (8%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
EEV+G+GA V KA + +VA Q+ S + + E+ LS + H +I+
Sbjct: 13 EEVVGRGAFGVVCKA--KWRAKDVAIKQIE------SESERKAFIVELRQLSRVNHPNIV 64
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIK---SWARQILQGLVYLHS 149
+ Y + ++ + E G+L + SW Q QG+ YLHS
Sbjct: 65 KLYGACLN----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 150 RDP-PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-E 207
P +IHRDLK N+ + +KI D G A ++ + + G+ +MAPE++E
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGS 178
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPA-QIYKKVTSGKLPGAFYSIQDLEAQRFI 266
+Y+E DV+S+G+ + E+ T P+ E PA +I V +G P ++ + +
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK-PIESLM 237
Query: 267 GRCLV-NASKRLSAKELL 283
RC + S+R S +E++
Sbjct: 238 TRCWSKDPSQRPSMEEIV 255
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A + +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 78
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K R D + ++ ++ L Y HS+ VI
Sbjct: 79 GYFHDATR--VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR--VI 134
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 135 HRDIKPENLLL-GSNGELKIADFGWSVHAPSSRR-DTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E P+ E + Y++++ ++ F A+ I R L NA
Sbjct: 193 LWSLGVLCYEFLVGMPPF-EAHTYQETYRRIS--RVEFTFPDFVTEGARDLISRLLKHNA 249
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+RL+ E+L P++ ++ K
Sbjct: 250 SQRLTLAEVLEHPWIKANSSK 270
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 22/258 (8%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
EEV+G+GA V KA + +VA Q+ S + + E+ LS + H +I+
Sbjct: 14 EEVVGRGAFGVVCKA--KWRAKDVAIKQIE------SESERKAFIVELRQLSRVNHPNIV 65
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIK---SWARQILQGLVYLHS 149
+ Y + ++ + E G+L + SW Q QG+ YLHS
Sbjct: 66 KLYGACLN----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 121
Query: 150 RDP-PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-E 207
P +IHRDLK N+ + +KI D G A ++ + + G+ +MAPE++E
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGS 179
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPA-QIYKKVTSGKLPGAFYSIQDLEAQRFI 266
+Y+E DV+S+G+ + E+ T P+ E PA +I V +G P ++ + +
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK-PIESLM 238
Query: 267 GRCLV-NASKRLSAKELL 283
RC + S+R S +E++
Sbjct: 239 TRCWSKDPSQRPSMEEIV 256
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 28/217 (12%)
Query: 20 YIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSE 79
+ + DP + E+ G G+ VY A D V EV + +S + Q + E
Sbjct: 47 FFKDDPEKLFSDLREI-GHGSFGAVYFARD-VRNSEVVAIKKMSYSGKQSNEKWQDIIKE 104
Query: 80 VHLLSTLKHDSIIRF-------YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRA 132
V L L+H + I++ +T+W+ ++ + S L ++K + V+I A
Sbjct: 105 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS------ASDLLEVHKKPLQEVEIAA 158
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
+ A LQGL YLHS + +IHRD+K NI ++ G VK+GD G A+I+ A+
Sbjct: 159 VTHGA---LQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIM---APANX 209
Query: 193 VIGTPEFMAPELY----EEDYNELVDVYSFGMCVLEM 225
+GTP +MAPE+ E Y+ VDV+S G+ +E+
Sbjct: 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 28/217 (12%)
Query: 20 YIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSE 79
+ + DP + E+ G G+ VY A D V EV + +S + Q + E
Sbjct: 8 FFKDDPEKLFSDLREI-GHGSFGAVYFARD-VRNSEVVAIKKMSYSGKQSNEKWQDIIKE 65
Query: 80 VHLLSTLKHDSIIRF-------YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRA 132
V L L+H + I++ +T+W+ ++ + S L ++K + V+I A
Sbjct: 66 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS------ASDLLEVHKKPLQEVEIAA 119
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
+ A LQGL YLHS + +IHRD+K NI ++ G VK+GD G A+I+ A+
Sbjct: 120 VTHGA---LQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIM---APANX 170
Query: 193 VIGTPEFMAPELY----EEDYNELVDVYSFGMCVLEM 225
+GTP +MAPE+ E Y+ VDV+S G+ +E+
Sbjct: 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 18/277 (6%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM----RSPDDLQRLYSEVHLLSTL 86
+ + LG GA V A + +VA + + R D + +E+ +L L
Sbjct: 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 197
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
H II+ + D + + + E+ G L + +R+ K + Q+L + Y
Sbjct: 198 NHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
LH +IHRDLK +N+ ++ +KI D G + IL + ++ GTP ++APE+
Sbjct: 255 LHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 312
Query: 205 Y----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK---LPGAFYSI 257
YN VD +S G+ + + P+SE + ++TSGK +P + +
Sbjct: 313 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 372
Query: 258 QDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVK 294
+ +V+ R + +E L P+L +++K
Sbjct: 373 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 409
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 130/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 74
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ A ++ GT +++ PE+ E ++E VD
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIEGRMHDEKVD 188
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 189 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 245
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 246 SQRPMLREVLEHPWITANSSK 266
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 100
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 101 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 156
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 157 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 214
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 215 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 271
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 272 SQRPMLREVLEHPWITANSSK 292
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 18/277 (6%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM----RSPDDLQRLYSEVHLLSTL 86
+ + LG GA V A + +VA + + R D + +E+ +L L
Sbjct: 19 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 78
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
H II+ + D + + + E+ G L + +R+ K + Q+L + Y
Sbjct: 79 NHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
LH +IHRDLK +N+ ++ +KI D G + IL + ++ GTP ++APE+
Sbjct: 136 LHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 193
Query: 205 Y----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK---LPGAFYSI 257
YN VD +S G+ + + P+SE + ++TSGK +P + +
Sbjct: 194 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 253
Query: 258 QDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVK 294
+ +V+ R + +E L P+L +++K
Sbjct: 254 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 290
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 130/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 77
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ A ++ GT +++ PE+ E ++E VD
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIEGRMHDEKVD 191
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 192 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 248
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 249 SQRPMLREVLEHPWITANSSK 269
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 136/279 (48%), Gaps = 19/279 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E+LG G V+K + G+++A ++ R D + + +E+ +++ L H ++I+
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIK----TRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTL--REYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
Y ++ + + E G L R + Y ++ I + +QI +G+ ++H
Sbjct: 151 LYDAF--ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTI-LFMKQICEGIRHMHQM- 206
Query: 152 PPVIHRDLKCDNIF-VNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEEDYN 210
++H DLK +NI VN Q+KI D GLA + + GTPEF+APE+ D+
Sbjct: 207 -YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFV 265
Query: 211 EL-VDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDL--EAQRFIG 267
D++S G+ + + P+ N A+ + + + QD+ EA+ FI
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFL-GDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS 324
Query: 268 RCLVN-ASKRLSAKELLLDPFLASDEV--KLLSKTKLNQ 303
+ L+ S R+SA E L P+L+ ++ +L ++ K N+
Sbjct: 325 KLLIKEKSWRISASEALKHPWLSDHKLHSRLSAQKKKNR 363
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 18/277 (6%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM----RSPDDLQRLYSEVHLLSTL 86
+ + LG GA V A + +VA + + R D + +E+ +L L
Sbjct: 12 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 71
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
H II+ + D + + + E+ G L + +R+ K + Q+L + Y
Sbjct: 72 NHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
LH +IHRDLK +N+ ++ +KI D G + IL + ++ GTP ++APE+
Sbjct: 129 LHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 186
Query: 205 Y----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK---LPGAFYSI 257
YN VD +S G+ + + P+SE + ++TSGK +P + +
Sbjct: 187 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 246
Query: 258 QDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVK 294
+ +V+ R + +E L P+L +++K
Sbjct: 247 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 283
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 18/277 (6%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM----RSPDDLQRLYSEVHLLSTL 86
+ + LG GA V A + +VA + + R D + +E+ +L L
Sbjct: 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
H II+ + D + + + E+ G L + +R+ K + Q+L + Y
Sbjct: 73 NHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
LH +IHRDLK +N+ ++ +KI D G + IL + ++ GTP ++APE+
Sbjct: 130 LHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 205 Y----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK---LPGAFYSI 257
YN VD +S G+ + + P+SE + ++TSGK +P + +
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 258 QDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVK 294
+ +V+ R + +E L P+L +++K
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 284
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 18/277 (6%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM----RSPDDLQRLYSEVHLLSTL 86
+ + LG GA V A + +VA + + R D + +E+ +L L
Sbjct: 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
H II+ + D + + + E+ G L + +R+ K + Q+L + Y
Sbjct: 73 NHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
LH +IHRDLK +N+ ++ +KI D G + IL + ++ GTP ++APE+
Sbjct: 130 LHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 205 Y----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK---LPGAFYSI 257
YN VD +S G+ + + P+SE + ++TSGK +P + +
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 258 QDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVK 294
+ +V+ R + +E L P+L +++K
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 284
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 18/277 (6%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM----RSPDDLQRLYSEVHLLSTL 86
+ + LG GA V A + +VA + + R D + +E+ +L L
Sbjct: 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
H II+ + D + + + E+ G L + +R+ K + Q+L + Y
Sbjct: 73 NHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
LH +IHRDLK +N+ ++ +KI D G + IL + ++ GTP ++APE+
Sbjct: 130 LHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 205 Y----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK---LPGAFYSI 257
YN VD +S G+ + + P+SE + ++TSGK +P + +
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 258 QDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVK 294
+ +V+ R + +E L P+L +++K
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 284
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 18/277 (6%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELM----RSPDDLQRLYSEVHLLSTL 86
+ + LG GA V A + +VA + + R D + +E+ +L L
Sbjct: 152 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 211
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
H II+ + D + + + E+ G L + +R+ K + Q+L + Y
Sbjct: 212 NHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
LH +IHRDLK +N+ ++ +KI D G + IL + ++ GTP ++APE+
Sbjct: 269 LHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 326
Query: 205 Y----EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK---LPGAFYSI 257
YN VD +S G+ + + P+SE + ++TSGK +P + +
Sbjct: 327 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 386
Query: 258 QDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVK 294
+ +V+ R + +E L P+L +++K
Sbjct: 387 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 423
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 91
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 92 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 147
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 148 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 205
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 206 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 262
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 263 SQRPMLREVLEHPWITANSSK 283
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 129/258 (50%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 94
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 95 VKLYFTFQD-DEKLY-FGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+S +GT ++++PEL E+
Sbjct: 153 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
++ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 210 SASKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 264
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 265 VEKLLVLDATKRLGCEEM 282
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 74
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 189 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 245
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 246 SQRPMLREVLEHPWITANSSK 266
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 131/262 (50%), Gaps = 14/262 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 74
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 75 GYFHDSTR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK--VI 130
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ A ++ GT +++ PE+ E ++E VD
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIEGRMHDEKVD 188
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQ-IYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-N 272
++S G+ E + P+ AN Q YK+++ ++ F A+ I R L N
Sbjct: 189 LWSLGVLCYEFLVGKPPFE--ANTYQDTYKRIS--RVEFTFPDFVTEGARDLISRLLKHN 244
Query: 273 ASKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 245 PSQRPMLREVLEHPWITANSSK 266
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 79
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 80 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE E ++E VD
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEXIEGRXHDEKVD 193
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 194 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 250
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 251 SQRPXLREVLEHPWITANSSK 271
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 36 LGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
LGKG +V Y + + G VA Q++ + PD + E+ +L L D I
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFI 70
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLHSR 150
+++ + + E SG LR++ +++R R+D + ++ QI +G+ YL SR
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 130
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI---GTPEF-MAPE-LY 205
+HRDL NI V VKI D GLA +L K V +P F APE L
Sbjct: 131 R--CVHRDLAARNILVESE-AHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYK 243
+ ++ DV+SFG+ + E+FT Y C+ A+ +
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFT--YCDKSCSPSAEFLR 223
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 100
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 101 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 156
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ + GT +++ PE+ E ++E VD
Sbjct: 157 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRR-DDLCGTLDYLPPEMIEGRMHDEKVD 214
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 215 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 271
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 272 SQRPMLREVLEHPWITANSSK 292
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 128/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 97
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 98 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 156 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P AF+ +A+
Sbjct: 213 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFP----KARDL 267
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 268 VEKLLVLDATKRLGCEEM 285
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 78
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 79 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 134
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 135 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 193 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 249
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 250 SQRPMLREVLEHPWITANSSK 270
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 73
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 74 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 129
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 130 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 187
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 188 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 244
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 245 SQRPMLREVLEHPWITANSSK 265
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 77
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 192 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 248
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 249 SQRPMLREVLEHPWITANSSK 269
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 79
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 80 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 194 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 250
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 251 SQRPMLREVLEHPWITANSSK 271
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 75
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 76 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 131
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 132 HRDIKPENLLL-GSAGELKIADFGWSCHAPSSRRT-TLSGTLDYLPPEMIEGRMHDEKVD 189
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 190 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 246
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 247 SQRPMLREVLEHPWITANSSK 267
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +K+ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 15/210 (7%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
EE++G G VY+A +G EVA R + ++ + E L + LKH +I
Sbjct: 11 LEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
I + + + + E G L +R+ + +WA QI +G+ YLH
Sbjct: 69 IALRG--VCLKEPNLCLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEA 125
Query: 152 -PPVIHRDLKCDNIFV-----NGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPE 203
P+IHRDLK NI + NG L +KI D GLA + + S G +MAPE
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT-TKMSAAGAYAWMAPE 184
Query: 204 LYEED-YNELVDVYSFGMCVLEMFTCEYPY 232
+ +++ DV+S+G+ + E+ T E P+
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 77
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 192 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 248
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 249 SQRPMLREVLEHPWITANSSK 269
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +K+ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 74
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ + GT +++ PE+ E ++E VD
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-ELCGTLDYLPPEMIEGRMHDEKVD 188
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 189 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 245
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 246 SQRPMLREVLEHPWITANSSK 266
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 123/270 (45%), Gaps = 18/270 (6%)
Query: 28 RYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLK 87
+Y E +G G V A + G VA + N L DL R+ +E+ L L+
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL---GSDLPRIKTEIEALKNLR 66
Query: 88 HDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYL 147
H I + Y ++ K F + E G L +Y R+ + RQI+ + Y+
Sbjct: 67 HQHICQLYHV-LETANKIF-MVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYV 124
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAH--SVIGTPEFMAPELY 205
HS+ HRDLK +N+ + + ++K+ D GL A +G+K H + G+ + APEL
Sbjct: 125 HSQG--YAHRDLKPENLLFDEY-HKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 206 EED--YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLE 261
+ DV+S G+ +L + C + + N +YKK+ GK +P L
Sbjct: 182 QGKSYLGSEADVWSMGI-LLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILL 240
Query: 262 AQRFIGRCLVNASKRLSAKELLLDPFLASD 291
Q+ + V+ KR+S K LL P++ D
Sbjct: 241 LQQMLQ---VDPKKRISMKNLLNHPWIMQD 267
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 190
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G+ ++ GTPE++APE+ + YN+ VD ++ G+
Sbjct: 191 ENLLIDQQ-GYIQVTDFGFAKRVKGA--TWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 248 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 289
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +K+ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 75
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 76 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 131
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 132 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRR-DTLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 190 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 246
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 247 SQRPMLREVLEHPWITANSSK 267
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +K+ D GLA ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLMIDQQ-GYIKVTDFGLAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 75
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 76 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 131
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ + GT +++ PE+ E ++E VD
Sbjct: 132 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 190 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 246
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 247 SQRPMLREVLEHPWITANSSK 267
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 24/270 (8%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSP----DDLQRLYSEVHLLSTLKHD 89
EV+GKGA V + I+ G + A V + + SP +DL+R S H+ LKH
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM---LKHP 86
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR--VDIRAIKS-WARQILQGLVY 146
I+ ++ D + M + E K+ V A+ S + RQIL+ L Y
Sbjct: 87 HIVELLETY-SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 147 LHSRDPPVIHRDLKCDNIFVNG--HLGQVKIGDLGLAAILRGSK-SAHSVIGTPEFMAPE 203
H D +IHRD+K +N+ + + VK+GD G+A L S A +GTP FMAPE
Sbjct: 146 CH--DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 204 LYE-EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL---PGAFYSIQD 259
+ + E Y + VDV+ G+ + + + P+ ++++ + GK P + I +
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFY--GTKERLFEGIIKGKYKMNPRQWSHISE 261
Query: 260 LEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
A+ + R L ++ ++R++ E L P+L
Sbjct: 262 -SAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 79
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 80 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ + GT +++ PE+ E ++E VD
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 194 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 250
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 251 SQRPMLREVLEHPWITANSSK 271
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 74
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ + GT +++ PE+ E ++E VD
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-XLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 189 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 245
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 246 SQRPMLREVLEHPWITANSSK 266
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 74
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ + GT +++ PE+ E ++E VD
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 189 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 245
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 246 SQRPMLREVLEHPWITANSSK 266
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 128/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 95
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 96 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+S +GT ++++PEL E+
Sbjct: 154 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 211 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 265
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 266 VEKLLVLDATKRLGCEEM 283
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 76
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 77 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 132
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ + GT +++ PE+ E ++E VD
Sbjct: 133 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRX-XLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 191 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 247
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 248 SQRPMLREVLEHPWITANSSK 268
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 74
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ + GT +++ PE+ E ++E VD
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRX-XLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 189 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 245
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 246 SQRPMLREVLEHPWITANSSK 266
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 74
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ + GT +++ PE+ E ++E VD
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-DLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 189 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 245
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 246 SQRPMLREVLEHPWITANSSK 266
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 128/258 (49%), Gaps = 12/258 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 71
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 72 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 127
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 128 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 185
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 186 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 242
Query: 274 SKRLSAKELLLDPFLASD 291
S+R +E+L P++ ++
Sbjct: 243 SQRPMLREVLEHPWITAN 260
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 27/281 (9%)
Query: 24 DPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR-SPDDLQRLYSEVHL 82
DP G + L E ++G G VYK G V Q+ ++M + D+ + + E+++
Sbjct: 21 DPAGIFELVE-LVGNGTYGQVYK------GRHVKTGQLAAIKVMDVTGDEEEEIKQEINM 73
Query: 83 LSTLKHD-SIIRFYTSWIDVDQKTFN----FITEMFTSGTLREYRKKYRRVDIRA--IKS 135
L H +I +Y ++I + + + E +G++ + K + ++ I
Sbjct: 74 LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY 133
Query: 136 WARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL-RGSKSAHSVI 194
R+IL+GL +LH VIHRD+K N+ + + +VK+ D G++A L R ++ I
Sbjct: 134 ICREILRGLSHLHQHK--VIHRDIKGQNVLLTEN-AEVKLVDFGVSAQLDRTVGRRNTFI 190
Query: 195 GTPEFMAPELYEED------YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG 248
GTP +MAPE+ D Y+ D++S G+ +EM P + +P + +
Sbjct: 191 GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD-MHPMRALFLIPRN 249
Query: 249 KLPGAFYSIQDLEAQRFIGRCLV-NASKRLSAKELLLDPFL 288
P + Q FI CLV N S+R + ++L+ PF+
Sbjct: 250 PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 79
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E G + + +K + D + ++ ++ L Y HS+ VI
Sbjct: 80 GYFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 194 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 250
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 251 SQRPMLREVLEHPWITANSSK 271
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 77
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ + GT +++ PE+ E ++E VD
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRR-DDLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 192 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 248
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 249 SQRPMLREVLEHPWITANSSK 269
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 113 DNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 170
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +K+ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 171 ENLLIDQQ-GYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 228 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 77
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ + GT +++ PE+ E ++E VD
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRX-XLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 192 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 248
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 249 SQRPMLREVLEHPWITANSSK 269
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 76
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 77 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 132
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI + G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 133 HRDIKPENLLL-GSAGELKIANFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 191 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 247
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 248 SQRPMLREVLEHPWITANSSK 268
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 79 EVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRA------ 132
EV +L+ +KH +I+++ S+ + + + + G L ++R++ +
Sbjct: 73 EVAVLANMKHPNIVQYRESF--EENGSLYIVMDYCEGGDL------FKRINAQKGVLFQE 124
Query: 133 --IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS-KS 189
I W QI L ++H R ++HRD+K NIF+ G V++GD G+A +L + +
Sbjct: 125 DQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVEL 181
Query: 190 AHSVIGTPEFMAPELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG 248
A + IGTP +++PE+ E YN D+++ G + E+ T ++ + E + + K+ SG
Sbjct: 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF-EAGSMKNLVLKIISG 240
Query: 249 KLPGA----FYSIQDLEAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLS 297
P Y ++ L +Q F N R S +L F+A K LS
Sbjct: 241 SFPPVSLHYSYDLRSLVSQLF----KRNPRDRPSVNSILEKGFIAKRIEKFLS 289
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 98 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 155
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G ++ GTPE++APE+ + YN+ VD ++ G+
Sbjct: 156 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 212
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 213 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 254
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 77
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E GT+ +K + D + ++ ++ L Y HS+ VI
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI + G + S+ ++ GT +++ PE+ E ++E VD
Sbjct: 134 HRDIKPENLLL-GSAGELKIANFGWSVHAPSSRRT-TLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 192 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 248
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 249 SQRPMLREVLEHPWITANSSK 269
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 128/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 91
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 92 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+S +GT ++++PEL E+
Sbjct: 150 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 207 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 261
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 262 VEKLLVLDATKRLGCEEM 279
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 170
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G ++ GTPE++APE+ + YN+ VD ++ G+
Sbjct: 171 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 228 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLAGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 170
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +K+ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 171 ENLMIDQQ-GYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 228 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLXGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 14/257 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+GKG+ VYK ID VA +++ +L + D+++ + E+ +LS I R++
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVA---IKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
S++ + I E G+ + K ++ I + R+IL+GL YLHS I
Sbjct: 84 GSYLKSTK--LWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERK--I 138
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTPEFMAPELYEED-YNELV 213
HRD+K N+ ++ G VK+ D G+A L ++ + +GTP +MAPE+ ++ Y+
Sbjct: 139 HRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 214 DVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLVNA 273
D++S G+ +E+ E P S+ +P ++ + P + F+ CL
Sbjct: 198 DIWSLGITAIELAKGEPPNSDL-HPMRVLFLIPKNS-PPTLEGQHSKPFKEFVEACLNKD 255
Query: 274 SK-RLSAKELLLDPFLA 289
+ R +AKELL F+
Sbjct: 256 PRFRPTAKELLKHKFIT 272
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 113 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 170
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 171 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 228 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D GLA ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLMIDQQ-GYIQVTDFGLAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 32/226 (14%)
Query: 28 RYGL-FEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLS 84
R+G+ F+E+ +G G V+KA + G +V+ N ++ EV L+
Sbjct: 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALA 59
Query: 85 TLKHDSIIRFYTSW--IDVDQKTFN-----------FIT-EMFTSGTLREYRKKYR--RV 128
L H +I+ + W D D +T + FI E GTL ++ +K R ++
Sbjct: 60 KLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119
Query: 129 DIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK 188
D QI +G+ Y+HS+ +I+RDLK NIF+ QVKIGD GL L+
Sbjct: 120 DKVLALELFEQITKGVDYIHSK--KLINRDLKPSNIFLV-DTKQVKIGDFGLVTSLKNDG 176
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMF-TCEYPY 232
GT +M+PE + +DY + VD+Y+ G+ + E+ C+ +
Sbjct: 177 KRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +K+ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLMIDQQ-GYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 170
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +K+ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 171 ENLMIDQQ-GYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 228 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 99 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 156
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 157 ENLLIDEQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 213
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 214 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 255
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 170
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +K+ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 171 ENLMIDQQ-GYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 228 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGT 196
A I++ L +LHS+ VIHRD+K N+ +N LGQVK+ D G++ L S + G
Sbjct: 159 AVSIVKALEHLHSK-LSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 197 PEFMAPE-----LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVT---SG 248
+MAPE L ++ Y+ D++S G+ ++E+ +PY P Q K+V S
Sbjct: 217 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 276
Query: 249 KLPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVK 294
+LP +S + ++ F +CL N+ +R + EL+ PF E K
Sbjct: 277 QLPADKFSAEFVD---FTSQCLKKNSKERPTYPELMQHPFFTLHESK 320
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 128/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 92
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 93 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A++ +GT ++++PEL E+
Sbjct: 151 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 208 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 262
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 263 VEKLLVLDATKRLGCEEM 280
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + +L ++ + Q L EV + S L+H +I+R Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLY 79
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D + I E G + + +K + D + ++ ++ L Y HS+ VI
Sbjct: 80 GYFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G G++KI D G + S+ + GT +++ PE+ E ++E VD
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRX-XLXGTLDYLPPEMIEGRMHDEKVD 193
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++S G+ E + P+ E + YK+++ ++ F A+ I R L N
Sbjct: 194 LWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNP 250
Query: 274 SKRLSAKELLLDPFLASDEVK 294
S+R +E+L P++ ++ K
Sbjct: 251 SQRPMLREVLEHPWITANSSK 271
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +K+ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLMIDQQ-GYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 162
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 163 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 220 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 261
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY-EEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLIIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIIISKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 94
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 95 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 153 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I+ K+ + P F+ +A+
Sbjct: 210 SAXKSSDLWALG-CIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARDL 264
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 265 VEKLLVLDATKRLGCEEM 282
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 107 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 164
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 165 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 221
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 222 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 263
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 170
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +K+ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 171 ENLMIDQQ-GYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 228 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 140/327 (42%), Gaps = 66/327 (20%)
Query: 32 FEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
FE++ LG G V+K + G+ +A +L L P ++ E+ +L
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSP 126
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
I+ FY ++ + + E G+L + KK R+ + + + +++GL YL
Sbjct: 127 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
+ ++HRD+K NI VN G++K+ D G++ L S A+S +GT +M+PE L
Sbjct: 185 KHK-IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 241
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYS----------------------------------- 233
Y+ D++S G+ ++EM YP
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 301
Query: 234 ---ECANPAQIYKKV------TSGKLPGAFYSIQDLEAQRFIGRCLV-NASKRLSAKELL 283
+ P I++ + KLP A +S LE Q F+ +CL+ N ++R K+L+
Sbjct: 302 YGMDSRPPMAIFELLDYIVNEPPPKLPSAVFS---LEFQDFVNKCLIKNPAERADLKQLM 358
Query: 284 LDPFLASDEVK-------LLSKTKLNQ 303
+ F+ + + L S LNQ
Sbjct: 359 VHAFIKRSDAEEVDFAGWLCSTIGLNQ 385
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 170
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 171 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 228 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 170
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 171 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 228 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 190
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 191 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 248 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 289
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 170
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 171 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 228 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 170
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 171 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 228 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 14 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 72
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 73 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 130
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 131 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 188 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 242
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 243 VEKLLVLDATKRLGCEEM 260
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 126/285 (44%), Gaps = 35/285 (12%)
Query: 36 LGKGAMKTVYKAID-EVLGVEVAWNQVRLNELMRS-PDDLQRLYSEVHLLSTLKHDSIIR 93
+G+GA V+KA D + G VA +VR+ P R + + L T +H +++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 94 FY--TSWIDVDQKTFNFITEMFTSGTLREYRKKYRR--VDIRAIKSWARQILQGLVYLHS 149
+ + D++T + L Y K V IK Q+L+GL +LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
V+HRDLK NI V GQ+K+ D GLA I + SV+ T + APE L +
Sbjct: 139 HR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPG-------------AFY 255
Y VD++S G EMF + + ++ Q+ K + LPG AF+
Sbjct: 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH 255
Query: 256 SIQDLEAQRFIG-----------RCLV-NASKRLSAKELLLDPFL 288
S ++F+ +CL N +KR+SA L P+
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 13 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 71
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 72 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 129
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 130 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 187 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 241
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 242 VEKLLVLDATKRLGCEEM 259
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 162
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 163 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 220 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 261
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 133 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 190
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 191 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 248 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 289
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 94
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 95 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 153 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 210 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 264
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 265 VEKLLVLDATKRLGCEEM 282
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 95
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 96 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 154 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 211 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 265
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 266 VEKLLVLDATKRLGCEEM 283
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 94
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 95 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 153 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I+ K+ + P F+ +A+
Sbjct: 210 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARDL 264
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 265 VEKLLVLDATKRLGCEEM 282
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 92
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 93 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 151 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 208 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 262
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 263 VEKLLVLDATKRLGCEEM 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 170
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 171 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 228 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 92
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 93 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 151 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 208 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 262
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 263 VEKLLVLDATKRLGCEEM 280
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 94
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 95 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 153 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 210 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 264
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 265 VEKLLVLDATKRLGCEEM 282
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 94
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 95 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 153 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 210 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 264
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 265 VEKLLVLDATKRLGCEEM 282
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 11 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 69
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 70 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 128 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 185 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 239
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 240 VEKLLVLDATKRLGCEEM 257
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ +M YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYQM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 70
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 71 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 129 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 186 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 240
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 241 VEKLLVLDATKRLGCEEM 258
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 126/285 (44%), Gaps = 35/285 (12%)
Query: 36 LGKGAMKTVYKAID-EVLGVEVAWNQVRLNELMRS-PDDLQRLYSEVHLLSTLKHDSIIR 93
+G+GA V+KA D + G VA +VR+ P R + + L T +H +++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 94 FY--TSWIDVDQKTFNFITEMFTSGTLREYRKKYRR--VDIRAIKSWARQILQGLVYLHS 149
+ + D++T + L Y K V IK Q+L+GL +LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
V+HRDLK NI V GQ+K+ D GLA I + SV+ T + APE L +
Sbjct: 139 HR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPG-------------AFY 255
Y VD++S G EMF + + ++ Q+ K + LPG AF+
Sbjct: 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH 255
Query: 256 SIQDLEAQRFIG-----------RCLV-NASKRLSAKELLLDPFL 288
S ++F+ +CL N +KR+SA L P+
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++APE+ + YN+ VD ++ G+
Sbjct: 170 ENLMIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 22/272 (8%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQ-RLYSEVHLLST 85
G Y + + LG+G+ V A G +VA + L +S D+Q R+ E+ L
Sbjct: 8 GNYQIVK-TLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS--DMQGRIEREISYLRL 64
Query: 86 LKHDSIIRFYTSWIDVDQKTFNFITEMFTSGT-LREYRKKYRRVDIRAIKSWARQILQGL 144
L+H II+ Y DV + I + +G L +Y + ++ + + + +QI+ +
Sbjct: 65 LRHPHIIKLY----DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 120
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
Y H ++HRDLK +N+ ++ HL VKI D GL+ I+ + G+P + APE+
Sbjct: 121 EYCHRHK--IVHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 177
Query: 205 YEEDY--NELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG--KLPGAFYSIQDL 260
VDV+S G+ + M P+ + + P ++K +++G LP F S
Sbjct: 178 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVYTLP-KFLSPG-- 233
Query: 261 EAQRFIGRCL-VNASKRLSAKELLLDPFLASD 291
A I R L VN R+S E++ D + D
Sbjct: 234 -AAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 264
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 126/285 (44%), Gaps = 35/285 (12%)
Query: 36 LGKGAMKTVYKAID-EVLGVEVAWNQVRLNELMRS-PDDLQRLYSEVHLLSTLKHDSIIR 93
+G+GA V+KA D + G VA +VR+ P R + + L T +H +++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 94 FY--TSWIDVDQKTFNFITEMFTSGTLREYRKKYRR--VDIRAIKSWARQILQGLVYLHS 149
+ + D++T + L Y K V IK Q+L+GL +LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
V+HRDLK NI V GQ+K+ D GLA I + SV+ T + APE L +
Sbjct: 139 HR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPG-------------AFY 255
Y VD++S G EMF + + ++ Q+ K + LPG AF+
Sbjct: 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH 255
Query: 256 SIQDLEAQRFIG-----------RCLV-NASKRLSAKELLLDPFL 288
S ++F+ +CL N +KR+SA L P+
Sbjct: 256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 76
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 77 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 135 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 192 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 246
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 247 VEKLLVLDATKRLGCEEM 264
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 22/272 (8%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQ-RLYSEVHLLST 85
G Y + + LG+G+ V A G +VA + L +S D+Q R+ E+ L
Sbjct: 4 GNYQIVK-TLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS--DMQGRIEREISYLRL 60
Query: 86 LKHDSIIRFYTSWIDVDQKTFNFITEMFTSGT-LREYRKKYRRVDIRAIKSWARQILQGL 144
L+H II+ Y DV + I + +G L +Y + ++ + + + +QI+ +
Sbjct: 61 LRHPHIIKLY----DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 116
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
Y H ++HRDLK +N+ ++ HL VKI D GL+ I+ + G+P + APE+
Sbjct: 117 EYCHRHK--IVHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 173
Query: 205 YEEDY--NELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG--KLPGAFYSIQDL 260
VDV+S G+ + M P+ + + P ++K +++G LP F S
Sbjct: 174 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVYTLP-KFLSPG-- 229
Query: 261 EAQRFIGRCL-VNASKRLSAKELLLDPFLASD 291
A I R L VN R+S E++ D + D
Sbjct: 230 -AAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 260
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 21/265 (7%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
+ E LG+G+ V A +VA + +L++ D R+ E+ L L+H
Sbjct: 12 IIRETLGEGSFGKVKLATHYKTQQKVALKFIS-RQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 91 IIRFYTSWIDVDQKTFNFITEM-FTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
II+ Y DV + + + + G L +Y + +R+ + + +QI+ + Y H
Sbjct: 71 IIKLY----DVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR 126
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEEDY 209
++HRDLK +N+ ++ +L VKI D GL+ I+ + G+P + APE+
Sbjct: 127 HK--IVHRDLKPENLLLDDNL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKL 183
Query: 210 --NELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDL---EAQR 264
VDV+S G+ + M P+ + P ++KKV S Y + D AQ
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-NLFKKVNS-----CVYVMPDFLSPGAQS 237
Query: 265 FIGRCLV-NASKRLSAKELLLDPFL 288
I R +V + +R++ +E+ DP+
Sbjct: 238 LIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 99
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y + D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 100 VKLYFCFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 158 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 215 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 269
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 270 VEKLLVLDATKRLGCEEM 287
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK I E + + VA +++ P E +++++ H
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVA---IKILNETTGPKANVEFMDEALIMASMDHP 77
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
++R + T +T++ G L EY +++ + + + +W QI +G++YL
Sbjct: 78 HLVRLLGVCL---SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L G + ++ G ++MA E +
Sbjct: 135 ERR--LVHRDLAARNVLVKSP-NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 205 YEEDYNELVDVYSFGMCVLEMFT 227
+ + DV+S+G+ + E+ T
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK I E + + VA +++ P E +++++ H
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVA---IKILNETTGPKANVEFMDEALIMASMDHP 100
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
++R + T +T++ G L EY +++ + + + +W QI +G++YL
Sbjct: 101 HLVRLLGVCLS---PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L G + ++ G ++MA E +
Sbjct: 158 ERR--LVHRDLAARNVLVKSP-NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 205 YEEDYNELVDVYSFGMCVLEMFT 227
+ + DV+S+G+ + E+ T
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ TV A + E A + +++ + + + E ++S L H
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 91
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 92 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 150 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 207 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 261
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 262 VEKLLVLDATKRLGCEEM 279
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 22/272 (8%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQ-RLYSEVHLLST 85
G Y + + LG+G+ V A G +VA + L +S D+Q R+ E+ L
Sbjct: 14 GNYQIVK-TLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS--DMQGRIEREISYLRL 70
Query: 86 LKHDSIIRFYTSWIDVDQKTFNFITEMFTSGT-LREYRKKYRRVDIRAIKSWARQILQGL 144
L+H II+ Y DV + I + +G L +Y + ++ + + + +QI+ +
Sbjct: 71 LRHPHIIKLY----DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 126
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
Y H ++HRDLK +N+ ++ HL VKI D GL+ I+ + G+P + APE+
Sbjct: 127 EYCHRHK--IVHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 183
Query: 205 YEEDY--NELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG--KLPGAFYSIQDL 260
VDV+S G+ + M P+ + + P ++K +++G LP F S
Sbjct: 184 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVYTLP-KFLSPG-- 239
Query: 261 EAQRFIGRCL-VNASKRLSAKELLLDPFLASD 291
A I R L VN R+S E++ D + D
Sbjct: 240 -AAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 270
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE +APE+ + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEALAPEIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGT 196
A I++ L +LHS+ VIHRD+K N+ +N LGQVK+ D G++ L + G
Sbjct: 115 AVSIVKALEHLHSK-LSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 197 PEFMAPE-----LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVT---SG 248
+MAPE L ++ Y+ D++S G+ ++E+ +PY P Q K+V S
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 232
Query: 249 KLPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVK 294
+LP +S + ++ F +CL N+ +R + EL+ PF E K
Sbjct: 233 QLPADKFSAEFVD---FTSQCLKKNSKERPTYPELMQHPFFTLHESK 276
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 22/272 (8%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQ-RLYSEVHLLST 85
G Y + + LG+G+ V A G +VA + L +S D+Q R+ E+ L
Sbjct: 13 GNYQIVK-TLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS--DMQGRIEREISYLRL 69
Query: 86 LKHDSIIRFYTSWIDVDQKTFNFITEMFTSGT-LREYRKKYRRVDIRAIKSWARQILQGL 144
L+H II+ Y DV + I + +G L +Y + ++ + + + +QI+ +
Sbjct: 70 LRHPHIIKLY----DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 125
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
Y H ++HRDLK +N+ ++ HL VKI D GL+ I+ + G+P + APE+
Sbjct: 126 EYCHRHK--IVHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 182
Query: 205 YEEDY--NELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG--KLPGAFYSIQDL 260
VDV+S G+ + M P+ + + P ++K +++G LP F S
Sbjct: 183 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVYTLP-KFLSPG-- 238
Query: 261 EAQRFIGRCL-VNASKRLSAKELLLDPFLASD 291
A I R L VN R+S E++ D + D
Sbjct: 239 -AAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 244 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 244 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 70 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 245 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 275
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D + E G + + ++ R + +A QI+ YLHS D +I+RDLK
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKP 169
Query: 162 DNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGM 220
+N+ ++ G +++ D G A ++G + GTPE++AP + + YN+ VD ++ G+
Sbjct: 170 ENLLIDQQ-GYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPAIILSKGYNKAVDWWALGV 226
Query: 221 CVLEMFTCEYPYSECANPAQIYKKVTSGKL--PGAFYS-IQDL 260
+ EM YP P QIY+K+ SGK+ P F S ++DL
Sbjct: 227 LIYEM-AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 28 RYGL-FEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLS 84
R+G+ F+E+ +G G V+KA + G +V+ N ++ EV L+
Sbjct: 9 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN--------EKAEREVKALA 60
Query: 85 TLKHDSIIRFYTSW--IDVDQKTFN------------------------FIT-EMFTSGT 117
L H +I+ + W D D +T + FI E GT
Sbjct: 61 KLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGT 120
Query: 118 LREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKI 175
L ++ +K R ++D QI +G+ Y+HS+ +IHRDLK NIF+ QVKI
Sbjct: 121 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK--KLIHRDLKPSNIFLV-DTKQVKI 177
Query: 176 GDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMF-TCEYPY 232
GD GL L+ GT +M+PE + +DY + VD+Y+ G+ + E+ C+ +
Sbjct: 178 GDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 236
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR---GSKSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 244 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 70 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 245 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 275
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
++LGKG V ++ G A +R E++ + D++ +E +L +H +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTA 72
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++ D+ F+ E G L + + R + + +I+ L YLHSRD
Sbjct: 73 LKYAFQTHDR--LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD-- 128
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLA--AILRGSKSAHSVIGTPEFMAPELYEE-DYN 210
V++RD+K +N+ ++ G +KI D GL I G+ + + GTPE++APE+ E+ DY
Sbjct: 129 VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYG 186
Query: 211 ELVDVYSFGMCVLEMFTCEYPY 232
VD + G+ + EM P+
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
++LGKG V ++ G A +R E++ + D++ +E +L +H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++ D+ F+ E G L + + R + + +I+ L YLHSRD
Sbjct: 70 LKYAFQTHDR--LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLA--AILRGSKSAHSVIGTPEFMAPELYEE-DYN 210
V++RD+K +N+ ++ G +KI D GL I G+ + + GTPE++APE+ E+ DY
Sbjct: 126 VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYG 183
Query: 211 ELVDVYSFGMCVLEMFTCEYPY 232
VD + G+ + EM P+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 20/265 (7%)
Query: 19 GYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYS 78
G + D N Y L E +G+G+ V A+ + + A ++ + +D+ R
Sbjct: 1 GSTKGDINQYYTL-ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQ 55
Query: 79 EVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKS 135
E+ ++ +L H +IIR Y ++ D + E+ T G L E +++ +R D I
Sbjct: 56 EIEIMKSLDHPNIIRLYETF--EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARI-- 111
Query: 136 WARQILQGLVYLHSRDPPVIHRDLKCDNIF--VNGHLGQVKIGDLGLAAILRGSKSAHSV 193
+ +L + Y H + V HRDLK +N + +K+ D GLAA + K +
Sbjct: 112 -MKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK 168
Query: 194 IGTPEFMAPELYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG--KLP 251
+GTP +++P++ E Y D +S G+ ++ + C YP ++ K+ G P
Sbjct: 169 VGTPYYVSPQVLEGLYGPECDEWSAGV-MMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 252 GAFYSIQDLEAQRFIGRCLVNASKR 276
+ +A+ I R L + K+
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQ 252
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR---GSKSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 244 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
++LGKG V ++ G A +R E++ + D++ +E +L +H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++ D+ F+ E G L + + R + + +I+ L YLHSRD
Sbjct: 70 LKYAFQTHDR--LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLA--AILRGSKSAHSVIGTPEFMAPELYEE-DYN 210
V++RD+K +N+ ++ G +KI D GL I G+ + + GTPE++APE+ E+ DY
Sbjct: 126 VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYG 183
Query: 211 ELVDVYSFGMCVLEMFTCEYPY 232
VD + G+ + EM P+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 138/327 (42%), Gaps = 66/327 (20%)
Query: 32 FEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
FE++ LG G V+K + G+ +A +L L P ++ E+ +L
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
I+ FY ++ + E G+L + KK R+ + + + +++GL YL
Sbjct: 65 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
+ ++HRD+K NI VN G++K+ D G++ L S A+S +GT +M+PE L
Sbjct: 123 KHK-IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 179
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYS----------------------------------- 233
Y+ D++S G+ ++EM YP
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 234 ---ECANPAQIYKKV------TSGKLPGAFYSIQDLEAQRFIGRCLV-NASKRLSAKELL 283
+ P I++ + KLP +S LE Q F+ +CL+ N ++R K+L+
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFS---LEFQDFVNKCLIKNPAERADLKQLM 296
Query: 284 LDPFLASDEVK-------LLSKTKLNQ 303
+ F+ + + L S LNQ
Sbjct: 297 VHAFIKRSDAEEVDFAGWLCSTIGLNQ 323
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 68 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 123
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 124 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 242
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 243 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 273
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 70 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 245 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 275
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 126/258 (48%), Gaps = 18/258 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F ++LG+G+ T A + E A + +++ + + + E ++S L H
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMSRLDHPFF 92
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ Y ++ D D+K + F +G L +Y +K D + + +I+ L YLH +
Sbjct: 93 VKLYFTFQD-DEKLY-FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL---RGSKSAHSVIGTPEFMAPELY-EE 207
+IHRDLK +NI +N + ++I D G A +L A+ +GT ++++PEL E+
Sbjct: 151 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK--LPGAFYSIQDLEAQRF 265
+ D+++ G C++ P N I++K+ + P F+ +A+
Sbjct: 208 SACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDL 262
Query: 266 IGRCLV-NASKRLSAKEL 282
+ + LV +A+KRL +E+
Sbjct: 263 VEKLLVLDATKRLGCEEM 280
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 138/327 (42%), Gaps = 66/327 (20%)
Query: 32 FEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
FE++ LG G V+K + G+ +A +L L P ++ E+ +L
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
I+ FY ++ + E G+L + KK R+ + + + +++GL YL
Sbjct: 65 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
+ ++HRD+K NI VN G++K+ D G++ L S A+S +GT +M+PE L
Sbjct: 123 KHK-IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 179
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYS----------------------------------- 233
Y+ D++S G+ ++EM YP
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 234 ---ECANPAQIYKKV------TSGKLPGAFYSIQDLEAQRFIGRCLV-NASKRLSAKELL 283
+ P I++ + KLP +S LE Q F+ +CL+ N ++R K+L+
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFS---LEFQDFVNKCLIKNPAERADLKQLM 296
Query: 284 LDPFLASDEVK-------LLSKTKLNQ 303
+ F+ + + L S LNQ
Sbjct: 297 VHAFIKRSDAEEVDFAGWLCSTIGLNQ 323
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 244 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 70 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR---GSKSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 245 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 275
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 70 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR---GSKSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 245 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 275
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 70 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR---GSKSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 245 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 275
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL 86
G Y + + LG G V ++ G +VA ++ + +RS D + ++ E+ L
Sbjct: 11 GHY-VLGDTLGVGTFGKVKIGEHQLTGHKVAV-KILNRQKIRSLDVVGKIKREIQNLKLF 68
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
+H II+ Y + F + E + G L +Y K+ RV+ + +QIL + Y
Sbjct: 69 RHPHIIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE 206
H V+HRDLK +N+ ++ H+ KI D GL+ ++ + + G+P + APE+
Sbjct: 127 CHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS 183
Query: 207 EDY--NELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG 248
VD++S G+ + + P+ + P ++KK+ G
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT-LFKKIRGG 226
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 244 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 20/265 (7%)
Query: 19 GYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYS 78
G + D N Y L E +G+G+ V A+ + + A ++ + +D+ R
Sbjct: 18 GSTKGDINQYYTL-ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQ 72
Query: 79 EVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKS 135
E+ ++ +L H +IIR Y ++ D + E+ T G L E +++ +R D I
Sbjct: 73 EIEIMKSLDHPNIIRLYETF--EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARI-- 128
Query: 136 WARQILQGLVYLHSRDPPVIHRDLKCDNIF--VNGHLGQVKIGDLGLAAILRGSKSAHSV 193
+ +L + Y H + V HRDLK +N + +K+ D GLAA + K +
Sbjct: 129 -MKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK 185
Query: 194 IGTPEFMAPELYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG--KLP 251
+GTP +++P++ E Y D +S G+ ++ + C YP ++ K+ G P
Sbjct: 186 VGTPYYVSPQVLEGLYGPECDEWSAGV-MMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 252 GAFYSIQDLEAQRFIGRCLVNASKR 276
+ +A+ I R L + K+
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQ 269
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 36/271 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASKR 276
P A +I D++ R+ + L +KR
Sbjct: 244 ILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRL-NELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+G GA TVYKA D G VA VR+ N P R + + L +H +++R
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 95 Y----TSWIDVDQKTFNFITEMF--TSGTLREYRKKYRRVDIRA--IKSWARQILQGLVY 146
TS D + K +T +F LR Y K + A IK RQ L+GL +
Sbjct: 72 MDVCATSRTDREIK----VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LY 205
LH+ ++HRDLK +NI V G VK+ D GLA I + V+ T + APE L
Sbjct: 128 LHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLL 184
Query: 206 EEDYNELVDVYSFGMCVLEMF 226
+ Y VD++S G EMF
Sbjct: 185 QSTYATPVDMWSVGCIFAEMF 205
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 138/327 (42%), Gaps = 66/327 (20%)
Query: 32 FEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
FE++ LG G V+K + G+ +A +L L P ++ E+ +L
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSP 91
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
I+ FY ++ + E G+L + KK R+ + + + +++GL YL
Sbjct: 92 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
+ ++HRD+K NI VN G++K+ D G++ L S A+S +GT +M+PE L
Sbjct: 150 KHK-IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 206
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYS----------------------------------- 233
Y+ D++S G+ ++EM YP
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266
Query: 234 ---ECANPAQIYKKV------TSGKLPGAFYSIQDLEAQRFIGRCLV-NASKRLSAKELL 283
+ P I++ + KLP +S LE Q F+ +CL+ N ++R K+L+
Sbjct: 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFS---LEFQDFVNKCLIKNPAERADLKQLM 323
Query: 284 LDPFLASDEVK-------LLSKTKLNQ 303
+ F+ + + L S LNQ
Sbjct: 324 VHAFIKRSDAEEVDFAGWLCSTIGLNQ 350
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRL-NELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+G GA TVYKA D G VA VR+ N P R + + L +H +++R
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 95 Y----TSWIDVDQKTFNFITEMF--TSGTLREYRKKYRRVDIRA--IKSWARQILQGLVY 146
TS D + K +T +F LR Y K + A IK RQ L+GL +
Sbjct: 72 MDVCATSRTDREIK----VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LY 205
LH+ ++HRDLK +NI V G VK+ D GLA I + V+ T + APE L
Sbjct: 128 LHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLL 184
Query: 206 EEDYNELVDVYSFGMCVLEMF 226
+ Y VD++S G EMF
Sbjct: 185 QSTYATPVDMWSVGCIFAEMF 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
++LGKG V ++ G A +R E++ + D++ +E +L +H +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTA 74
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++ D+ F+ E G L + + R + + +I+ L YLHSRD
Sbjct: 75 LKYAFQTHDR--LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD-- 130
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLA--AILRGSKSAHSVIGTPEFMAPELYEE-DYN 210
V++RD+K +N+ ++ G +KI D GL I G+ + GTPE++APE+ E+ DY
Sbjct: 131 VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYG 188
Query: 211 ELVDVYSFGMCVLEMFTCEYPY 232
VD + G+ + EM P+
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
++LGKG V ++ G A +R E++ + D++ +E +L +H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++ D+ F+ E G L + + R + + +I+ L YLHSRD
Sbjct: 70 LKYAFQTHDR--LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLA--AILRGSKSAHSVIGTPEFMAPELYEE-DYN 210
V++RD+K +N+ ++ G +KI D GL I G+ + GTPE++APE+ E+ DY
Sbjct: 126 VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYG 183
Query: 211 ELVDVYSFGMCVLEMFTCEYPY 232
VD + G+ + EM P+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRL-NELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+G GA TVYKA D G VA VR+ N P R + + L +H +++R
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 95 Y----TSWIDVDQKTFNFITEMF--TSGTLREYRKKYRRVDIRA--IKSWARQILQGLVY 146
TS D + K +T +F LR Y K + A IK RQ L+GL +
Sbjct: 72 MDVCATSRTDREIK----VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LY 205
LH+ ++HRDLK +NI V G VK+ D GLA I + V+ T + APE L
Sbjct: 128 LHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLL 184
Query: 206 EEDYNELVDVYSFGMCVLEMF 226
+ Y VD++S G EMF
Sbjct: 185 QSTYATPVDMWSVGCIFAEMF 205
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
++LGKG V ++ G A +R E++ + D++ +E +L +H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++ D+ F+ E G L + + R + + +I+ L YLHSRD
Sbjct: 70 LKYAFQTHDR--LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLA--AILRGSKSAHSVIGTPEFMAPELYEE-DYN 210
V++RD+K +N+ ++ G +KI D GL I G+ + GTPE++APE+ E+ DY
Sbjct: 126 VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYG 183
Query: 211 ELVDVYSFGMCVLEMFTCEYPY 232
VD + G+ + EM P+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL 86
G Y + + LG G V ++ G +VA ++ + +RS D + ++ E+ L
Sbjct: 11 GHY-VLGDTLGVGTFGKVKIGEHQLTGHKVAV-KILNRQKIRSLDVVGKIKREIQNLKLF 68
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
+H II+ Y + F + E + G L +Y K+ RV+ + +QIL + Y
Sbjct: 69 RHPHIIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE 206
H V+HRDLK +N+ ++ H+ KI D GL+ ++ + G+P + APE+
Sbjct: 127 CHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVIS 183
Query: 207 EDY--NELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG 248
VD++S G+ + + P+ + P ++KK+ G
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT-LFKKIRGG 226
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
++LGKG V ++ G A +R E++ + D++ +E +L +H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++ D+ F+ E G L + + R + + +I+ L YLHSRD
Sbjct: 70 LKYAFQTHDR--LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLA--AILRGSKSAHSVIGTPEFMAPELYEE-DYN 210
V++RD+K +N+ ++ G +KI D GL I G+ + GTPE++APE+ E+ DY
Sbjct: 126 VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYG 183
Query: 211 ELVDVYSFGMCVLEMFTCEYPY 232
VD + G+ + EM P+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 35 VLGKGAMKTVY----KAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
V+G+G+ V K D + + V EL+ +D+ + +E H+ +
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVV-----KKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ S + + F F+ E G L + ++ R++ + ++ +I L YLH R
Sbjct: 114 FLVGLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 172
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPE-LYEED 208
+I+RDLK DN+ ++ G +K+ D G+ LR + + GTP ++APE L ED
Sbjct: 173 G--IIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED 229
Query: 209 YNELVDVYSFGMCVLEMFTCEYPY---SECANPAQ 240
Y VD ++ G+ + EM P+ NP Q
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 264
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 35 VLGKGAMKTVY----KAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
V+G+G+ V K D + ++V EL+ +D+ + +E H+ +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVV-----KKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ S + + F F+ E G L + ++ R++ + ++ +I L YLH R
Sbjct: 71 FLVGLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 129
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPE-LYEED 208
+I+RDLK DN+ ++ G +K+ D G+ LR + GTP ++APE L ED
Sbjct: 130 G--IIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 186
Query: 209 YNELVDVYSFGMCVLEMFTCEYPY---SECANPAQ 240
Y VD ++ G+ + EM P+ NP Q
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 221
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 100/221 (45%), Gaps = 21/221 (9%)
Query: 19 GYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRS----PDDLQ 74
G + + RY E+ G GA TVYKA D G VA VR+ P
Sbjct: 1 GPLGSMATSRYEPVAEI-GVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTV 59
Query: 75 RLYSEVHLLSTLKHDSIIRFY----TSWIDVDQKTFNFITEMF--TSGTLREYRKKYRRV 128
R + + L +H +++R TS D + K +T +F LR Y K
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIK----VTLVFEHVDQDLRTYLDKAPPP 115
Query: 129 DIRA--IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG 186
+ A IK RQ L+GL +LH+ ++HRDLK +NI V G VK+ D GLA I
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSY 172
Query: 187 SKSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMF 226
+ V+ T + APE L + Y VD++S G EMF
Sbjct: 173 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 43/260 (16%)
Query: 27 GRYGL-FE--EVLGKGAMKTVYKAIDEVLGVEVAWNQVRL--NELMRSPDDLQRLYSEVH 81
GRY FE + LG+G V++A ++V A ++RL EL R +++ EV
Sbjct: 1 GRYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR-----EKVMREVK 55
Query: 82 LLSTLKHDSIIRFYTSWIDVDQ---------KTFNFI-TEMFTSGTLREYRKKYRRVDIR 131
L+ L+H I+R++ +W++ + K + +I ++ L+++ ++ R
Sbjct: 56 ALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER 115
Query: 132 AIKSWAR---QILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK 188
QI + + +LHS+ ++HRDLK NIF VK+GD GL + +
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDE 172
Query: 189 SAHSV-------------IGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSE 234
+V +GT +M+PE ++ Y+ VD++S G+ + E+ YP+S
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFST 229
Query: 235 CANPAQIYKKVTSGKLPGAF 254
+ V + K P F
Sbjct: 230 QMERVRTLTDVRNLKFPPLF 249
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 35 VLGKGAMKTVY----KAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
V+G+G+ V K D + ++V EL+ +D+ + +E H+ +
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVV-----KKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ S + + F F+ E G L + ++ R++ + ++ +I L YLH R
Sbjct: 67 FLVGLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 125
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPE-LYEED 208
+I+RDLK DN+ ++ G +K+ D G+ LR + GTP ++APE L ED
Sbjct: 126 G--IIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 209 YNELVDVYSFGMCVLEMFTCEYPY---SECANPAQ 240
Y VD ++ G+ + EM P+ NP Q
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 217
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 32 FEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
FE++ LG G V+K + G+ +A +L L P ++ E+ +L
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
I+ FY ++ + E G+L + KK R+ + + + +++GL YL
Sbjct: 65 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
+ ++HRD+K NI VN G++K+ D G++ L S A+S +GT +M+PE L
Sbjct: 123 KHK-IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 179
Query: 209 YNELVDVYSFGMCVLEMFTCEYP 231
Y+ D++S G+ ++EM YP
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 32 FEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
FE++ LG G V+K + G+ +A +L L P ++ E+ +L
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMAR---KLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
I+ FY ++ + E G+L + KK R+ + + + +++GL YL
Sbjct: 65 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
+ ++HRD+K NI VN G++K+ D G++ L S A+S +GT +M+PE L
Sbjct: 123 KHK-IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 179
Query: 209 YNELVDVYSFGMCVLEMFTCEYP 231
Y+ D++S G+ ++EM YP
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 134/293 (45%), Gaps = 30/293 (10%)
Query: 12 DEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPD 71
D A A Y + DP ++V+G+G V + + G E A + + SP+
Sbjct: 85 DWAAAKEFYQKYDP-------KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPE 137
Query: 72 DLQRLYS----EVHLLSTLK-HDSIIRFYTSWIDVDQKTFNFIT-EMFTSGTLREYRKKY 125
L+ + E H+L + H II S+ + +F F+ ++ G L +Y +
Sbjct: 138 QLEEVREATRRETHILRQVAGHPHIITLIDSY---ESSSFMFLVFDLMRKGELFDYLTEK 194
Query: 126 RRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR 185
+ + +S R +L+ + +LH+ + ++HRDLK +NI ++ ++ Q+++ D G + L
Sbjct: 195 VALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNM-QIRLSDFGFSCHLE 251
Query: 186 GSKSAHSVIGTPEFMAPELYE-------EDYNELVDVYSFGMCVLEMFTCEYPYSECANP 238
+ + GTP ++APE+ + Y + VD+++ G+ + + P+
Sbjct: 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH-RRQ 310
Query: 239 AQIYKKVTSGKLPGAFYSIQDLEA--QRFIGRCL-VNASKRLSAKELLLDPFL 288
+ + + G+ + D + + I R L V+ RL+A++ L PF
Sbjct: 311 ILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 122/266 (45%), Gaps = 16/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G+E A ++ + S + R + EV +L + H ++
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
I + + ++ I E+ + G L ++ + + S+ +QIL G+ YLH++
Sbjct: 78 ITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 152 PPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEED 208
+ H DLK +NI + N + +K+ D GLA + ++ GTPEF+APE+ +
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV--N 191
Query: 209 YNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQR 264
Y L D++S G+ + + P+ + S F+S A+
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 265 FIGRCLVNAS-KRLSAKELLLDPFLA 289
FI + LV + KRL+ +E L P++
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 17/211 (8%)
Query: 25 PNGRYGLFEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVH 81
P G F++V +G+G VYKA +++ G VA ++RL+ E P R E+
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EIS 57
Query: 82 LLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQ 139
LL L H +I++ I + K ++ F S L+++ + + IKS+ Q
Sbjct: 58 LLKELNHPNIVKLLDV-IHTENKL--YLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 140 ILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPE 198
+LQGL + HS V+HRDLK +N+ +N G +K+ D GLA A ++ + T
Sbjct: 115 LLQGLAFCHSHR--VLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 199 FMAPE--LYEEDYNELVDVYSFGMCVLEMFT 227
+ APE L + Y+ VD++S G EM T
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 122/266 (45%), Gaps = 16/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G+E A ++ + S + R + EV +L + H ++
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
I + + ++ I E+ + G L ++ + + S+ +QIL G+ YLH++
Sbjct: 78 ITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 152 PPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEED 208
+ H DLK +NI + N + +K+ D GLA + ++ GTPEF+APE+ +
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV--N 191
Query: 209 YNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQR 264
Y L D++S G+ + + P+ + S F+S A+
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 265 FIGRCLVNAS-KRLSAKELLLDPFLA 289
FI + LV + KRL+ +E L P++
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 35 VLGKGAMKTVY----KAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
V+G+G+ V K D + ++V EL+ +D+ + +E H+ +
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVV-----KKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ S + + F F+ E G L + ++ R++ + ++ +I L YLH R
Sbjct: 82 FLVGLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 140
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPE-LYEED 208
+I+RDLK DN+ ++ G +K+ D G+ LR + GTP ++APE L ED
Sbjct: 141 G--IIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 197
Query: 209 YNELVDVYSFGMCVLEMFTCEYPY---SECANPAQ 240
Y VD ++ G+ + EM P+ NP Q
Sbjct: 198 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 232
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F S L+++ + + IKS+ Q+LQGL + HS
Sbjct: 67 KLLDV-IHTENKL--YLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK +N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 124 R--VLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 122/266 (45%), Gaps = 16/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G+E A ++ + S + R + EV +L + H ++
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
I + + ++ I E+ + G L ++ + + S+ +QIL G+ YLH++
Sbjct: 78 ITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 152 PPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEED 208
+ H DLK +NI + N + +K+ D GLA + ++ GTPEF+APE+ +
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV--N 191
Query: 209 YNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQR 264
Y L D++S G+ + + P+ + S F+S A+
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 265 FIGRCLVNAS-KRLSAKELLLDPFLA 289
FI + LV + KRL+ +E L P++
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 25 PNGRYGLFEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVH 81
P G F++V +G+G VYKA +++ G VA ++RL+ E P R E+
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EIS 57
Query: 82 LLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQ 139
LL L H +I++ I + K ++ F S L+++ + + IKS+ Q
Sbjct: 58 LLKELNHPNIVKLLDV-IHTENKL--YLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ 114
Query: 140 ILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPE 198
+LQGL + HS V+HRDLK N+ +N G +K+ D GLA A ++ + T
Sbjct: 115 LLQGLAFCHSHR--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 199 FMAPE--LYEEDYNELVDVYSFGMCVLEMFT 227
+ APE L + Y+ VD++S G EM T
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 127/270 (47%), Gaps = 36/270 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 251 -----PGAFYSIQDLEAQRFIGRCLVNASK 275
P A +I D++ R+ + L +K
Sbjct: 244 ILVENPSARITIPDIKKDRWYNKPLKKGAK 273
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIG- 195
A I++ L +LHS+ VIHRD+K N+ +N LGQVK D G++ L + G
Sbjct: 142 AVSIVKALEHLHSK-LSVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGC 199
Query: 196 ----TPEFMAPELYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVT---SG 248
PE + PEL ++ Y+ D++S G+ +E+ +PY P Q K+V S
Sbjct: 200 KPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSP 259
Query: 249 KLPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVK 294
+LP +S + ++ F +CL N+ +R + EL PF E K
Sbjct: 260 QLPADKFSAEFVD---FTSQCLKKNSKERPTYPELXQHPFFTLHESK 303
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 98/208 (47%), Gaps = 31/208 (14%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 68
Query: 93 ----------RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQ 142
+ Y + VDQ F+ +G + + IKS+ Q+LQ
Sbjct: 69 KLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG-----------IPLPLIKSYLFQLLQ 117
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMA 201
GL + HS V+HRDLK N+ +N G +K+ D GLA A ++ + T + A
Sbjct: 118 GLAFCHSHR--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 202 PE--LYEEDYNELVDVYSFGMCVLEMFT 227
PE L + Y+ VD++S G EM T
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 76 LYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIK 134
L E+ +L L H++I+++ + I E SG+L+EY K + +++++
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL 129
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI 194
+A QI +G+ YL SR +HRDL N+ V QVKIGD GL + K +V
Sbjct: 130 KYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVK 186
Query: 195 ---GTPEF-MAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+P F APE L + + DV+SFG+ + E+ T
Sbjct: 187 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 20/268 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G+E A ++ + S + R + EV +L + H ++
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
I + + ++ I E+ + G L ++ + + S+ +QIL G+ YLH++
Sbjct: 78 ITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 152 PPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEED 208
+ H DLK +NI + N + +K+ D GLA + ++ GTPEF+APE+ +
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV--N 191
Query: 209 YNEL---VDVYSFGMCVLEMFTCEYPY---SECANPAQIYKKVTSGKLPGAFYSIQDLEA 262
Y L D++S G+ + + P+ ++ A I S F+S A
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS--VSYDFDEEFFSHTSELA 249
Query: 263 QRFIGRCLVNAS-KRLSAKELLLDPFLA 289
+ FI + LV + KRL+ +E L P++
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 67
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F S L+++ + + IKS+ Q+LQGL + HS
Sbjct: 68 KLLDV-IHTENKL--YLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 125 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 20/268 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G+E A ++ + S + R + EV +L + H ++
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
I + + ++ I E+ + G L ++ + + S+ +QIL G+ YLH++
Sbjct: 78 ITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 152 PPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEED 208
+ H DLK +NI + N + +K+ D GLA + ++ GTPEF+APE+ +
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV--N 191
Query: 209 YNEL---VDVYSFGMCVLEMFTCEYPY---SECANPAQIYKKVTSGKLPGAFYSIQDLEA 262
Y L D++S G+ + + P+ ++ A I S F+S A
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS--VSYDFDEEFFSHTSELA 249
Query: 263 QRFIGRCLVNAS-KRLSAKELLLDPFLA 289
+ FI + LV + KRL+ +E L P++
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
+F+ LG GA V+ + G+E + + RS ++++ +E+ +L +L H +
Sbjct: 25 IFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD---RSQVPMEQIEAEIEVLKSLDHPN 81
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTLRE----YRKKYRRVDIRAIKSWARQILQGLVY 146
II+ + + D + E G L E + + + + + +Q++ L Y
Sbjct: 82 IIKIFEVF--EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 147 LHSRDPPVIHRDLKCDNIFV--NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
HS+ V+H+DLK +NI +KI D GLA + + + + + GT +MAPE+
Sbjct: 140 FHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV 197
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYS 233
++ D D++S G+ + + T P++
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTGCLPFT 226
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
+E LG G V + I + G +VA Q R EL SP + +R E+ ++ L H ++
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCR-QEL--SPKNRERWCLEIQIMKKLNHPNV 75
Query: 92 IRFYTSWIDVDQKTFN----FITEMFTSGTLREYRKKYRR---VDIRAIKSWARQILQGL 144
+ + + N E G LR+Y ++ + I++ I L
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQV--KIGDLGLAAILRGSKSAHSVIGTPEFMAP 202
YLH +IHRDLK +NI + ++ KI DLG A L + +GT +++AP
Sbjct: 136 RYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 203 ELYEE-DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKV 245
EL E+ Y VD +SFG E T P+ P Q + KV
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 237
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
+E LG G V + I + G +VA Q R EL SP + +R E+ ++ L H ++
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCR-QEL--SPKNRERWCLEIQIMKKLNHPNV 74
Query: 92 IRFYTSWIDVDQKTFN----FITEMFTSGTLREYRKKYRR---VDIRAIKSWARQILQGL 144
+ + + N E G LR+Y ++ + I++ I L
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQV--KIGDLGLAAILRGSKSAHSVIGTPEFMAP 202
YLH +IHRDLK +NI + ++ KI DLG A L + +GT +++AP
Sbjct: 135 RYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 203 ELYEE-DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKV 245
EL E+ Y VD +SFG E T P+ P Q + KV
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 76 LYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIK 134
L E+ +L L H++I+++ + I E SG+L+EY K + +++++
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL 117
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI 194
+A QI +G+ YL SR +HRDL N+ V QVKIGD GL + K +V
Sbjct: 118 KYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVK 174
Query: 195 ---GTPEF-MAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+P F APE L + + DV+SFG+ + E+ T
Sbjct: 175 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 16/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G+E A ++ + S + R + EV +L + H +I
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
I + + ++ I E+ + G L ++ + + S+ +QIL G+ YLH++
Sbjct: 78 ITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 152 PPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEED 208
+ H DLK +NI + N + +K+ D GLA + ++ GTPEF+APE+ +
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV--N 191
Query: 209 YNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQR 264
Y L D++S G+ + + P+ + S F+S A+
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 265 FIGRCLVNAS-KRLSAKELLLDPFLA 289
FI + LV + KRL+ +E L P++
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 36/265 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + + L H+++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 70 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 251 -----PGAFYSIQDLEAQRFIGRCL 270
P A +I D++ R+ + L
Sbjct: 245 ILVENPSARITIPDIKKDRWYNKPL 269
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 72
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 73 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI--LRGSKSAHSVIGTPEFMAPE--LYE 206
V+HRDLK N+ +N G +K+ D GLA + H V+ T + APE L
Sbjct: 130 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGX 185
Query: 207 EDYNELVDVYSFGMCVLEMFT 227
+ Y+ VD++S G EM T
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVT 206
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 17/220 (7%)
Query: 15 KAHIGYIETDPNGRYGLFEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDD 72
KA +G ++ D FE + LG G V K G+ +A +L L P
Sbjct: 7 KAKVGELKDDD------FERISELGAGNGGVVTKVQHRPSGLIMAR---KLIHLEIKPAI 57
Query: 73 LQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRA 132
++ E+ +L I+ FY ++ + E G+L + K+ +R+
Sbjct: 58 RNQIIRELQVLHECNSPYIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKEAKRIPEEI 115
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
+ + +L+GL YL + ++HRD+K NI VN G++K+ D G++ L S A+S
Sbjct: 116 LGKVSIAVLRGLAYLREKHQ-IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSM-ANS 172
Query: 193 VIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP 231
+GT +MAPE L Y+ D++S G+ ++E+ YP
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 36/265 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 251 -----PGAFYSIQDLEAQRFIGRCL 270
P A +I D++ R+ + L
Sbjct: 244 ILVENPSARITIPDIKKDRWYNKPL 268
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 67
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 68 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK +N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 125 R--VLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 120/255 (47%), Gaps = 15/255 (5%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F +V+GKG+ V A + V A ++ +++ ++ + LL +KH +
Sbjct: 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
+ + S+ D+ F+ + G L + ++ R + +A +I L YLHS +
Sbjct: 102 VGLHFSFQTADK--LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPE-LYEEDY 209
+++RDLK +NI ++ G + + D GL + + + + GTPE++APE L+++ Y
Sbjct: 160 --IVYRDLKPENILLDSQ-GHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 210 NELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL---PGAFYSIQDLEAQRFI 266
+ VD + G + EM P+ N A++Y + + L P S + L
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFY-SRNTAEMYDNILNKPLQLKPNITNSARHL----LE 271
Query: 267 GRCLVNASKRLSAKE 281
G + +KRL AK+
Sbjct: 272 GLLQKDRTKRLGAKD 286
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 36/265 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 251 -----PGAFYSIQDLEAQRFIGRCL 270
P A +I D++ R+ + L
Sbjct: 244 ILVENPSARITIPDIKKDRWYNKPL 268
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 9/213 (4%)
Query: 24 DPNGRYGLFE--EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVH 81
DP FE ++LGKG V ++ G A ++ E++ + D++ +E
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENR 62
Query: 82 LLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQIL 141
+L +H + S+ D+ F+ E G L + + R + + +I+
Sbjct: 63 VLQNSRHPFLTALKYSFQTHDR--LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 120
Query: 142 QGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFM 200
L YLHS + V++RDLK +N+ ++ G +KI D GL ++ + GTPE++
Sbjct: 121 SALDYLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYL 178
Query: 201 APELYEE-DYNELVDVYSFGMCVLEMFTCEYPY 232
APE+ E+ DY VD + G+ + EM P+
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 126/290 (43%), Gaps = 26/290 (8%)
Query: 9 GAADEAKAHIGYIETDPNGRYGLFEEV------LGKGAMKTVYKAIDEVLGVEVAWNQVR 62
G A E GY DP+ F++ LG G+ V+K + G A R
Sbjct: 35 GEASETLQSPGY---DPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK--R 89
Query: 63 LNELMRSPDDLQRLYSEVHLLSTL-KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREY 121
R P D R +EV + +H +R +W ++ ++ +L+++
Sbjct: 90 SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW---EEGGILYLQTELCGPSLQQH 146
Query: 122 RKKYRRVDIRAIKSWA--RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
+ + + + W R L L +LHS+ ++H D+K NIF+ G G+ K+GD G
Sbjct: 147 CEAWG-ASLPEAQVWGYLRDTLLALAHLHSQG--LVHLDVKPANIFL-GPRGRCKLGDFG 202
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPA 239
L L + + G P +MAPEL + Y DV+S G+ +LE+ C E +
Sbjct: 203 LLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEV-ACNM---ELPHGG 258
Query: 240 QIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLVNASK-RLSAKELLLDPFL 288
+ ++++ G LP F + E + + L K R +A+ LL P L
Sbjct: 259 EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVL 308
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 36/265 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 70 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 251 -----PGAFYSIQDLEAQRFIGRCL 270
P A +I D++ R+ + L
Sbjct: 245 ILVENPSARITIPDIKKDRWYNKPL 269
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 14/232 (6%)
Query: 28 RYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLK 87
RY L E+LG G M V+ A D L +VA +R +L R P R E + L
Sbjct: 13 RYEL-GEILGFGGMSEVHLARDLRLHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALN 70
Query: 88 HDSIIRFY-TSWIDVDQKTFNFITEMFTSG-TLRE-YRKKYRRVDIRAIKSWARQILQGL 144
H +I+ Y T + +I + G TLR+ + RAI+ A Q L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA-DACQAL 129
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSA----HSVIGTPEFM 200
+ H +IHRD+K NI ++ VK+ D G+A + S ++ +VIGT +++
Sbjct: 130 NFSHQNG--IIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 201 APELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLP 251
+PE D + DVYS G + E+ T E P++ + + Y+ V +P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 66 KLLDV-IHTENKL--YLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK +N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 123 R--VLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 36/265 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 251 -----PGAFYSIQDLEAQRFIGRCL 270
P A +I D++ R+ + L
Sbjct: 244 ILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 28/268 (10%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLK-HDS--II 92
+G G V+K G +A Q+R RS + + + L LK HD I+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMR-----RSGNKEENKRILMDLDVVLKSHDCPYIV 87
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDI--RAIKSWARQILQGLVYLHSR 150
+ + ++I T FI M GT E KK + I R + I++ L YL +
Sbjct: 88 QCFGTFI---TNTDVFIA-MELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--- 207
VIHRD+K NI ++ GQ+K+ D G++ L K+ G +MAPE +
Sbjct: 144 HG-VIHRDVKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDP 201
Query: 208 ---DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK---LPGAFYSIQDLE 261
DY+ DV+S G+ ++E+ T ++PY C ++ KV + LPG D
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDF- 260
Query: 262 AQRFIGRCLV-NASKRLSAKELLLDPFL 288
Q F+ CL + KR +LL F+
Sbjct: 261 -QSFVKDCLTKDHRKRPKYNKLLEHSFI 287
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 36/265 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ LG+GA V A++ V VA V++ ++ R+ D + + E+ + L H+++++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVA---VKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
FY + + + E + G L + + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSVIGTPEFMAPELYE--ED 208
+ HRD+K +N+ ++ +KI D GLA + R + + + + GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY-------------KKVTSGKL----- 250
+ E VDV+S G+ + M E P+ + ++ Q Y KK+ S L
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 251 -----PGAFYSIQDLEAQRFIGRCL 270
P A +I D++ R+ + L
Sbjct: 244 ILVENPSARITIPDIKKDRWYNKPL 268
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 14/232 (6%)
Query: 28 RYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLK 87
RY L E+LG G M V+ A D L +VA +R +L R P R E + L
Sbjct: 13 RYEL-GEILGFGGMSEVHLARDLRLHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALN 70
Query: 88 HDSIIRFY-TSWIDVDQKTFNFITEMFTSG-TLRE-YRKKYRRVDIRAIKSWARQILQGL 144
H +I+ Y T + +I + G TLR+ + RAI+ A Q L
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA-DACQAL 129
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSA----HSVIGTPEFM 200
+ H +IHRD+K NI ++ VK+ D G+A + S ++ +VIGT +++
Sbjct: 130 NFSHQNG--IIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 201 APELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLP 251
+PE D + DVYS G + E+ T E P++ + + Y+ V +P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 66 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI--LRGSKSAHSVIGTPEFMAPE--LYE 206
V+HRDLK N+ +N G +K+ D GLA + H V+ T + APE L
Sbjct: 123 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGX 178
Query: 207 EDYNELVDVYSFGMCVLEMFT 227
+ Y+ VD++S G EM T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 67 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK +N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 124 R--VLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 7/201 (3%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
++LGKG V ++ G A ++ E++ + D++ +E +L +H +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFLTA 215
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
S+ D+ F+ E G L + + R + + +I+ L YLHS +
Sbjct: 216 LKYSFQTHDR--LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS-EKN 272
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEE-DYNE 211
V++RDLK +N+ ++ G +KI D GL ++ + + GTPE++APE+ E+ DY
Sbjct: 273 VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGR 331
Query: 212 LVDVYSFGMCVLEMFTCEYPY 232
VD + G+ + EM P+
Sbjct: 332 AVDWWGLGVVMYEMMCGRLPF 352
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 7/201 (3%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
++LGKG V ++ G A ++ E++ + D++ +E +L +H +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFLTA 212
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
S+ D+ F+ E G L + + R + + +I+ L YLHS +
Sbjct: 213 LKYSFQTHDR--LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS-EKN 269
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEE-DYNE 211
V++RDLK +N+ ++ G +KI D GL ++ + + GTPE++APE+ E+ DY
Sbjct: 270 VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGR 328
Query: 212 LVDVYSFGMCVLEMFTCEYPY 232
VD + G+ + EM P+
Sbjct: 329 AVDWWGLGVVMYEMMCGRLPF 349
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 25 PNGRYGLFEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVH 81
P G F++V +G+G VYKA +++ G VA ++RL+ E P R E+
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EIS 57
Query: 82 LLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQ 139
LL L H +I++ I + K ++ F L+++ + + IKS+ Q
Sbjct: 58 LLKELNHPNIVKLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 140 ILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPE 198
+LQGL + HS V+HRDLK N+ +N G +K+ D GLA A ++ + T
Sbjct: 115 LLQGLAFCHSHR--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 199 FMAPE--LYEEDYNELVDVYSFGMCVLEMFT 227
+ APE L + Y+ VD++S G EM T
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 24/270 (8%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSP----DDLQRLYSEVHLLSTLKHD 89
EV+GKG V + I+ G + A V + + SP +DL+R S H+L KH
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML---KHP 86
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR--VDIRAIKS-WARQILQGLVY 146
I+ ++ D + M + E K+ V A+ S + RQIL+ L Y
Sbjct: 87 HIVELLETY-SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 147 LHSRDPPVIHRDLK--CDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTPEFMAPE 203
H D +IHRD+K C + + VK+G G+A L S A +GTP FMAPE
Sbjct: 146 CH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 204 LYE-EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL---PGAFYSIQD 259
+ + E Y + VDV+ G+ + + + P+ ++++ + GK P + I +
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFY--GTKERLFEGIIKGKYKMNPRQWSHISE 261
Query: 260 LEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
A+ + R L ++ ++R++ E L P+L
Sbjct: 262 -SAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 24/270 (8%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSP----DDLQRLYSEVHLLSTLKHD 89
EV+GKG V + I+ G + A V + + SP +DL+R S H+L KH
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML---KHP 88
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR--VDIRAIKS-WARQILQGLVY 146
I+ ++ D + M + E K+ V A+ S + RQIL+ L Y
Sbjct: 89 HIVELLETY-SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 147 LHSRDPPVIHRDLK--CDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTPEFMAPE 203
H D +IHRD+K C + + VK+G G+A L S A +GTP FMAPE
Sbjct: 148 CH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 205
Query: 204 LYE-EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL---PGAFYSIQD 259
+ + E Y + VDV+ G+ + + + P+ ++++ + GK P + I +
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSGCLPFY--GTKERLFEGIIKGKYKMNPRQWSHISE 263
Query: 260 LEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
A+ + R L ++ ++R++ E L P+L
Sbjct: 264 -SAKDLVRRMLMLDPAERITVYEALNHPWL 292
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 77 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 76 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 132
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 133 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 188
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 76 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 132
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 133 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 188
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 41/226 (18%)
Query: 32 FEEVLGKGAMKTVYKAI----DEVLGVE--VAWNQVRLNELMRSPDDLQRLYSEVHLLST 85
+E+ +GKG V+K V+ ++ + + E++ + QR EV ++S
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR---EVFIMSN 79
Query: 86 LKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQ------ 139
L H +I++ Y + + F+ G L +R +D W+ +
Sbjct: 80 LNHPNIVKLYGLMHNPPRMVMEFVP----CGDLY-----HRLLDKAHPIKWSVKLRLMLD 130
Query: 140 ILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ-----VKIGDLGLAAILRGSKSAHSV- 193
I G+ Y+ +++PP++HRDL+ NIF+ L + K+ D GL+ +S HSV
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQS-LDENAPVCAKVADFGLS-----QQSVHSVS 184
Query: 194 --IGTPEFMAPELY---EEDYNELVDVYSFGMCVLEMFTCEYPYSE 234
+G ++MAPE EE Y E D YSF M + + T E P+ E
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 72
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 73 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI--LRGSKSAHSVIGTPEFMAPE--LYE 206
V+HRDLK N+ +N G +K+ D GLA + H V+ T + APE L
Sbjct: 130 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 185
Query: 207 EDYNELVDVYSFGMCVLEMFT 227
+ Y+ VD++S G EM T
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVT 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 25 PNGRYGLFEEV--LGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVH 81
P G F++V +G+G VYKA +++ G VA ++RL+ E P R E+
Sbjct: 2 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EIS 58
Query: 82 LLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQ 139
LL L H +I++ I + K ++ F L+++ + + IKS+ Q
Sbjct: 59 LLKELNHPNIVKLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 140 ILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPE 198
+LQGL + HS V+HRDLK N+ +N G +K+ D GLA A ++ + T
Sbjct: 116 LLQGLAFCHSHR--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLW 172
Query: 199 FMAPE--LYEEDYNELVDVYSFGMCVLEMFT 227
+ APE L + Y+ VD++S G EM T
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 142/288 (49%), Gaps = 47/288 (16%)
Query: 33 EEVLGKGAMKT-VYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLL-STLKHDS 90
++VLG GA T VY+ + + +VA ++ L E D EV LL + +H +
Sbjct: 29 KDVLGHGAEGTIVYRGMFD--NRDVAVKRI-LPECFSFAD------REVQLLRESDEHPN 79
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTLREY--RKKYRRVDIRAIKSWARQILQGLVYLH 148
+IR++ + D + F +I + TL+EY +K + + + I + +Q GL +LH
Sbjct: 80 VIRYFCTEKD---RQFQYIAIELCAATLQEYVEQKDFAHLGLEPI-TLLQQTTSGLAHLH 135
Query: 149 SRDPPVIHRDLKCDNIFV---NGHLGQVK--IGDLGLA---AILRGSKSAHS-VIGTPEF 199
S + ++HRDLK NI + N H G++K I D GL A+ R S S S V GT +
Sbjct: 136 SLN--IVHRDLKPHNILISMPNAH-GKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 200 MAPELYEEDYNE----LVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+APE+ ED E VD++S G CV Y SE ++P + + L GA
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAG-CVF-----YYVISEGSHPFGKSLQRQANILLGACS 246
Query: 256 -------SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKL 295
+D+ A+ I + + ++ KR SAK +L PF S E +L
Sbjct: 247 LDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQL 294
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 67
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 68 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 125 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 77 ITLHEVY---ENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 67
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 68 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 125 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 66 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 123 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 71 DDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDI 130
++++ ++ E+ ++ L+H ++ + S+ D++ + ++ G LR + ++
Sbjct: 57 NEVRNVFKELQIMQGLEHPFLVNLWYSF--QDEEDMFMVVDLLLGGDLRYHLQQNVHFKE 114
Query: 131 RAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSA 190
+K + +++ L YL ++ +IHRD+K DNI ++ H G V I D +AA+L
Sbjct: 115 ETVKLFICELVMALDYLQNQR--IIHRDMKPDNILLDEH-GHVHITDFNIAAMLPRETQI 171
Query: 191 HSVIGTPEFMAPELYEE----DYNELVDVYSFGMCVLEMFTCEYPY 232
++ GT +MAPE++ Y+ VD +S G+ E+ PY
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 77 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 65 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 122 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 68
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 69 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 126 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 77 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 66 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 123 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 67 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 124 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNED-XELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 66 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 123 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
++LGKG V ++ G A ++ E++ + D++ +E +L +H +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFLTA 73
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
S+ D+ F+ E G L + + R + + +I+ L YLHS +
Sbjct: 74 LKYSFQTHDR--LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS-EKN 130
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEE-DYNE 211
V++RDLK +N+ ++ G +KI D GL ++ + GTPE++APE+ E+ DY
Sbjct: 131 VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGR 189
Query: 212 LVDVYSFGMCVLEMFTCEYPY 232
VD + G+ + EM P+
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPF 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
++LGKG V ++ G A ++ E++ + D++ +E +L +H +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFLTA 72
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
S+ D+ F+ E G L + + R + + +I+ L YLHS +
Sbjct: 73 LKYSFQTHDR--LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS-EKN 129
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEE-DYNE 211
V++RDLK +N+ ++ G +KI D GL ++ + GTPE++APE+ E+ DY
Sbjct: 130 VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGR 188
Query: 212 LVDVYSFGMCVLEMFTCEYPY 232
VD + G+ + EM P+
Sbjct: 189 AVDWWGLGVVMYEMMCGRLPF 209
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 65 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 122 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 66 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 123 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 67 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 124 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 65 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 122 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 14/232 (6%)
Query: 28 RYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLK 87
RY L E+LG G M V+ A D L +VA +R +L R P R E + L
Sbjct: 30 RYEL-GEILGFGGMSEVHLARDLRLHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALN 87
Query: 88 HDSIIRFY-TSWIDVDQKTFNFITEMFTSG-TLRE-YRKKYRRVDIRAIKSWARQILQGL 144
H +I+ Y T + +I + G TLR+ + RAI+ A Q L
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA-DACQAL 146
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSA----HSVIGTPEFM 200
+ H +IHRD+K NI ++ VK+ D G+A + S ++ +VIGT +++
Sbjct: 147 NFSHQNG--IIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 203
Query: 201 APELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLP 251
+PE D + DVYS G + E+ T E P++ + + Y+ V +P
Sbjct: 204 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 255
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 151
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 152 -IIHRDLKPSNLAVNED-SELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 207
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 268 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 69
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 70 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI--LRGSKSAHSVIGTPEFMAPE--LYE 206
V+HRDLK N+ +N G +K+ D GLA + H V+ T + APE L
Sbjct: 127 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 182
Query: 207 EDYNELVDVYSFGMCVLEMFT 227
+ Y+ VD++S G EM T
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVT 203
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 77 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 66 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 123 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 66
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 67 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI--LRGSKSAHSVIGTPEFMAPE--LYE 206
V+HRDLK N+ +N G +K+ D GLA + H V+ T + APE L
Sbjct: 124 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 179
Query: 207 EDYNELVDVYSFGMCVLEMFT 227
+ Y+ VD++S G EM T
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 65 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 122 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 66 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI--LRGSKSAHSVIGTPEFMAPE--LYE 206
V+HRDLK N+ +N G +K+ D GLA + H V+ T + APE L
Sbjct: 123 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGC 178
Query: 207 EDYNELVDVYSFGMCVLEMFT 227
+ Y+ VD++S G EM T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE--LYEEDYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE L YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNAMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 147
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 148 -IIHRDLKPSNLAVNED-SELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 203
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 264 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 130/263 (49%), Gaps = 12/263 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + ++L + + Q L E+ + S L+H +I+R Y
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRREIEIQSHLRHPNILRMY 81
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D+K + E G L + +K+ R D + ++ ++ L Y H R VI
Sbjct: 82 NYF--HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--VI 137
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G+ G++KI D G ++ S + GT +++ PE+ E + ++E VD
Sbjct: 138 HRDIKPENLLM-GYKGELKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 195
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCL-VNA 273
++ G+ E P+ ++ + ++++ + L F ++ I + L +
Sbjct: 196 LWCAGVLCYEFLVGMPPFDSPSH-TETHRRIVNVDL--KFPPFLSDGSKDLISKLLRYHP 252
Query: 274 SKRLSAKELLLDPFLASDEVKLL 296
+RL K ++ P++ ++ ++L
Sbjct: 253 PQRLPLKGVMEHPWVKANSRRVL 275
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 130/263 (49%), Gaps = 12/263 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + ++L + + Q L E+ + S L+H +I+R Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRREIEIQSHLRHPNILRMY 80
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D+K + E G L + +K+ R D + ++ ++ L Y H R VI
Sbjct: 81 NYF--HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--VI 136
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G+ G++KI D G ++ S + GT +++ PE+ E + ++E VD
Sbjct: 137 HRDIKPENLLM-GYKGELKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 194
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCL-VNA 273
++ G+ E P+ ++ + ++++ + L F ++ I + L +
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPSH-TETHRRIVNVDL--KFPPFLSDGSKDLISKLLRYHP 251
Query: 274 SKRLSAKELLLDPFLASDEVKLL 296
+RL K ++ P++ ++ ++L
Sbjct: 252 PQRLPLKGVMEHPWVKANSRRVL 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 77 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 130/263 (49%), Gaps = 12/263 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ +A + ++L + + Q L E+ + S L+H +I+R Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRREIEIQSHLRHPNILRMY 80
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D+K + E G L + +K+ R D + ++ ++ L Y H R VI
Sbjct: 81 NYF--HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--VI 136
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G+ G++KI D G ++ S + GT +++ PE+ E + ++E VD
Sbjct: 137 HRDIKPENLLM-GYKGELKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 194
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCL-VNA 273
++ G+ E P+ ++ + ++++ + L F ++ I + L +
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPSH-TETHRRIVNVDL--KFPPFLSDGSKDLISKLLRYHP 251
Query: 274 SKRLSAKELLLDPFLASDEVKLL 296
+RL K ++ P++ ++ ++L
Sbjct: 252 PQRLPLKGVMEHPWVKANSRRVL 274
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 150
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 151 -IIHRDLKPSNLAVNED-XELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 206
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 267 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 77 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 66 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 123 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 65 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 122 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 77 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 68
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+ + + + IKS+ Q+LQGL + HS
Sbjct: 69 KLLDV-IHTENKL--YLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 126 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 64
Query: 93 ----------RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQ 142
+ Y + V Q F+ +G + + IKS+ Q+LQ
Sbjct: 65 KLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG-----------IPLPLIKSYLFQLLQ 113
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI--LRGSKSAHSVIGTPEFM 200
GL + HS V+HRDLK N+ +N G +K+ D GLA + H V+ T +
Sbjct: 114 GLAFCHSHR--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 169
Query: 201 APE--LYEEDYNELVDVYSFGMCVLEMFT 227
APE L + Y+ VD++S G EM T
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 16/266 (6%)
Query: 20 YIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LY 77
+ + D Y + EE LG G V K + G E A ++ L S + R +
Sbjct: 5 FRQEDVEDHYEMGEE-LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE 63
Query: 78 SEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
EV++L ++H +II + I ++ I E+ + G L ++ + + +
Sbjct: 64 REVNILREIRHPNIITLHD--IFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL 121
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVI 194
+QIL G+ YLHS+ + H DLK +NI + N ++K+ D G+A + ++
Sbjct: 122 KQILDGVHYLHSK--RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF 179
Query: 195 GTPEFMAPELYEEDYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKL 250
GTPEF+APE+ +Y L D++S G+ + + P+ E +
Sbjct: 180 GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 237
Query: 251 PGAFYSIQDLEAQRFIGRCLVNASKR 276
++S A+ FI R LV KR
Sbjct: 238 DEEYFSNTSELAKDFIRRLLVKDPKR 263
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L++ +S +R Y E+ LL +KH+++I
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVK--KLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 157
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 158 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 213
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 274 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 321
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 77 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 151
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 152 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 207
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 268 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 152
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + T + APE+ YN
Sbjct: 153 -IIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 269 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 147
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 148 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 203
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 264 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 79 EVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWAR 138
E+ +L TL H+ II++ D +K+ + E G+LR+Y ++ + + + +A+
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQ 124
Query: 139 QILQGLVYLHSRDPPVIHRDLKCDNIFV-NGHLGQVKIGDLGLAAILRGSKSAHSVI--- 194
QI +G+ YLHS+ IHR+L N+ + N L VKIGD GLA + + V
Sbjct: 125 QICEGMAYLHSQH--YIHRNLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 195 GTPEF-MAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+P F APE L E + DV+SFG+ + E+ T
Sbjct: 181 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 77 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 152
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + T + APE+ YN
Sbjct: 153 -IIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 269 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 85 TLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGL 144
+L+H +I+RF + + + E + G L E R + + +Q++ G+
Sbjct: 71 SLRHPNIVRF--KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLG-QVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE 203
Y H+ V HRDLK +N ++G ++KI D G + S +GTP ++APE
Sbjct: 129 SYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPE 186
Query: 204 -LYEEDYN-ELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDL- 260
L +++Y+ ++ DV+S G+ + M YP+ + P K T ++ Y+I D
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK--TIHRILNVQYAIPDYV 244
Query: 261 ----EAQRFIGRCLV-NASKRLSAKEL 282
E + I R V + +KR+S E+
Sbjct: 245 HISPECRHLISRIFVADPAKRISIPEI 271
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 165
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 166 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 221
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 282 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 329
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 152
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + T + APE+ YN
Sbjct: 153 -IIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 269 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA +++ G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIV 65
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYR--KKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ I + K ++ F L+++ + + IKS+ Q+LQGL + HS
Sbjct: 66 KLLDV-IHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N G +K+ D GLA A ++ + T + APE L +
Sbjct: 123 R--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 147
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 148 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 203
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 264 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 131/290 (45%), Gaps = 25/290 (8%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V + D G+++A +L+ +S +R Y E+ LL +KH+++I
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 174
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 175 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 230
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGR 268
VD++S G + E+ T +P ++ N Q ++T + EA+ +I
Sbjct: 231 MTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYIN- 289
Query: 269 CLVNASKR------LSAKEL---LLDPFLASDEVKLLSKTKLNQKPFLNE 309
L KR + A L LL+ L D K ++ ++ P+ ++
Sbjct: 290 SLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 164
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 165 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 220
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 221 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 280
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 281 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 328
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 152
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 153 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 208
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 269 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 150
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 151 -IIHRDLKPSNLAVNED-XELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 206
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 267 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GL + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNED-SELKILDFGLCRHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 147
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 148 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 203
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 264 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 151
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 152 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 207
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 268 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 142
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 143 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 198
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 199 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 258
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 259 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 306
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 142
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 143 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 198
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 199 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 258
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 259 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 306
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 80
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 81 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 138 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 252
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 253 MIMRKCWMIDADSRPKFRELIIE 275
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 102
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 103 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 159
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 160 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 274
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 275 MIMVKCWMIDADSRPKFRELIIE 297
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 156
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 157 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 212
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 213 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 272
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 273 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 320
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 87
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 88 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 144
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 145 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 259
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 260 MIMRKCWMIDADSRPKFRELIIE 282
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 168
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 169 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 224
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 284
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 285 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 332
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 150
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 151 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 206
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 267 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 87 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 144
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 145 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 200
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 201 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 260
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 261 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 308
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 141
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 142 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 197
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 258 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 157
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 158 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 213
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 274 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 321
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 157
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 158 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 213
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 274 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 321
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 156
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 157 -IIHRDLKPSNLAVNEDX-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 212
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 213 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 272
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 273 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 320
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 168
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + T + APE+ YN
Sbjct: 169 -IIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMXGYVATRWYRAPEIMLNWMHYN 224
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 284
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 285 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 332
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 150
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 151 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 206
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 267 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 77
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 78 HVCRLLGICL---TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 135 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 249
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 250 MIMVKCWMIDADSRPKFRELIIE 272
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 77
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 78 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 135 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 249
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 250 MIMVKCWMIDADSRPKFRELIIE 272
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 118/295 (40%), Gaps = 44/295 (14%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E +G GA V A + G +VA ++ + +R E+ +L KHD+II
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKI--PNAFDVVTNAKRTLRELKILKHFKHDNIIA 118
Query: 94 F---YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ + ++ L + + + + ++ + Q+L+GL Y+HS
Sbjct: 119 IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA 178
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-----VIGTPEFMAPELY 205
VIHRDLK N+ VN + ++KIGD G+A L S + H + T + APEL
Sbjct: 179 Q--VIHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 206 EE--DYNELVDVYSFGMCVLEMFTCE--YPYSECANPAQIYKKVTSGKLPGAFYSI---- 257
+Y + +D++S G EM +P + Q+ V P ++
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 295
Query: 258 ----------------------QDLEAQRFIGRCL-VNASKRLSAKELLLDPFLA 289
D +A +GR L S R+SA L PFLA
Sbjct: 296 VRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLA 350
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 80
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 81 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 138 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 252
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 253 MIMVKCWMIDADSRPKFRELIIE 275
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 86 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 143
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 144 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 199
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 200 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 259
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 260 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 307
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 79 EVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWAR 138
E+ +L TL H+ II++ D + + E G+LR+Y ++ + + + +A+
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQ 141
Query: 139 QILQGLVYLHSRDPPVIHRDLKCDNIFV-NGHLGQVKIGDLGLAAILRGSKSAHSVI--- 194
QI +G+ YLH++ IHRDL N+ + N L VKIGD GLA + + V
Sbjct: 142 QICEGMAYLHAQH--YIHRDLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEXYRVREDG 197
Query: 195 GTPEF-MAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+P F APE L E + DV+SFG+ + E+ T
Sbjct: 198 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 16/266 (6%)
Query: 20 YIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LY 77
Y ++ Y + EE LG G V K + G E A ++ L S + R +
Sbjct: 19 YFQSMVEDHYEMGEE-LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE 77
Query: 78 SEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
EV++L ++H +II + I ++ I E+ + G L ++ + + +
Sbjct: 78 REVNILREIRHPNIITLHD--IFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL 135
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVI 194
+QIL G+ YLHS+ + H DLK +NI + N ++K+ D G+A + ++
Sbjct: 136 KQILDGVHYLHSK--RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF 193
Query: 195 GTPEFMAPELYEEDYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKL 250
GTPEF+APE+ +Y L D++S G+ + + P+ E +
Sbjct: 194 GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 251
Query: 251 PGAFYSIQDLEAQRFIGRCLVNASKR 276
++S A+ FI R LV KR
Sbjct: 252 DEEYFSNTSELAKDFIRRLLVKDPKR 277
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 15/252 (5%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K + G E A ++ L S + R + EV++L ++H +I
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
I + I ++ I E+ + G L ++ + + + +QIL G+ YLHS+
Sbjct: 71 ITLHD--IFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK- 127
Query: 152 PPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEED 208
+ H DLK +NI + N ++K+ D G+A + ++ GTPEF+APE+ +
Sbjct: 128 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV--N 184
Query: 209 YNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQR 264
Y L D++S G+ + + P+ E + ++S A+
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKD 244
Query: 265 FIGRCLVNASKR 276
FI R LV KR
Sbjct: 245 FIRRLLVKDPKR 256
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 83
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 84 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 140
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 141 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 255
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 256 MIMVKCWMIDADSRPKFRELIIE 278
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 80
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 81 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 138 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 252
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 253 MIMVKCWMIDADSRPKFRELIIE 275
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 79
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 80 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 137 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 251
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 252 MIMVKCWMIDADSRPKFRELIIE 274
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 6/104 (5%)
Query: 131 RAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR-GSKS 189
RAI + QI+ GL +LH R+ +I+RDLK +N+ ++ G V+I DLGLA L+ G
Sbjct: 290 RAI-FYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTK 345
Query: 190 AHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPY 232
GTP FMAPE L E+Y+ VD ++ G+ + EM P+
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 6/104 (5%)
Query: 131 RAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR-GSKS 189
RAI + QI+ GL +LH R+ +I+RDLK +N+ ++ G V+I DLGLA L+ G
Sbjct: 290 RAI-FYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTK 345
Query: 190 AHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPY 232
GTP FMAPE L E+Y+ VD ++ G+ + EM P+
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMTGXVATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 25 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 79 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHRDL+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 136 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NY 190
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 250
Query: 260 L 260
L
Sbjct: 251 L 251
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 28 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 81
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 82 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 138
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHRDL+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 139 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NY 193
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 253
Query: 260 L 260
L
Sbjct: 254 L 254
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 118/295 (40%), Gaps = 44/295 (14%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E +G GA V A + G +VA ++ + +R E+ +L KHD+II
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKI--PNAFDVVTNAKRTLRELKILKHFKHDNIIA 117
Query: 94 F---YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ + ++ L + + + + ++ + Q+L+GL Y+HS
Sbjct: 118 IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA 177
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-----VIGTPEFMAPELY 205
VIHRDLK N+ VN + ++KIGD G+A L S + H + T + APEL
Sbjct: 178 Q--VIHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 206 EE--DYNELVDVYSFGMCVLEMFTCE--YPYSECANPAQIYKKVTSGKLPGAFYSI---- 257
+Y + +D++S G EM +P + Q+ V P ++
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 294
Query: 258 ----------------------QDLEAQRFIGRCL-VNASKRLSAKELLLDPFLA 289
D +A +GR L S R+SA L PFLA
Sbjct: 295 VRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLA 349
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 74
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 75 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE 131
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 132 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 246
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 247 MIMVKCWMIDADSRPKFRELIIE 269
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 18/268 (6%)
Query: 29 YGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKH 88
Y + EE LG GA V++ + G A V + D + + E+ +S L+H
Sbjct: 53 YDIHEE-LGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKETVRKEIQTMSVLRH 107
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLRE-YRKKYRRVDIRAIKSWARQILQGLVYL 147
+++ + ++ D ++ I E + G L E ++ ++ + RQ+ +GL ++
Sbjct: 108 PTLVNLHDAFEDDNEMVM--IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 148 HSRDPPVIHRDLKCDNI-FVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE 206
H + +H DLK +NI F ++K+ D GL A L +S GT EF APE+ E
Sbjct: 166 HENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE 223
Query: 207 -EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL---PGAFYSIQDLEA 262
+ D++S G+ + + P+ N + + V S AF I + +
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMDDSAFSGISE-DG 281
Query: 263 QRFIGRCLV-NASKRLSAKELLLDPFLA 289
+ FI + L+ + + R++ + L P+L
Sbjct: 282 KDFIRKLLLADPNTRMTIHQALEHPWLT 309
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 6/104 (5%)
Query: 131 RAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR-GSKS 189
RAI + QI+ GL +LH R+ +I+RDLK +N+ ++ G V+I DLGLA L+ G
Sbjct: 290 RAI-FYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTK 345
Query: 190 AHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPY 232
GTP FMAPE L E+Y+ VD ++ G+ + EM P+
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 27 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 80
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 81 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 137
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHRDL+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 138 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NY 192
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 252
Query: 260 L 260
L
Sbjct: 253 L 253
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 71
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 72 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 129 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 243
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 244 MIMVKCWMIDADSRPKFRELIIE 266
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 41/226 (18%)
Query: 32 FEEVLGKGAMKTVYKAI----DEVLGVE--VAWNQVRLNELMRSPDDLQRLYSEVHLLST 85
+E+ +GKG V+K V+ ++ + + E++ + QR EV ++S
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR---EVFIMSN 79
Query: 86 LKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQ------ 139
L H +I++ Y + + F+ G L +R +D W+ +
Sbjct: 80 LNHPNIVKLYGLMHNPPRMVMEFVP----CGDLY-----HRLLDKAHPIKWSVKLRLMLD 130
Query: 140 ILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ-----VKIGDLGLAAILRGSKSAHSV- 193
I G+ Y+ +++PP++HRDL+ NIF+ L + K+ D G + +S HSV
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQS-LDENAPVCAKVADFGTS-----QQSVHSVS 184
Query: 194 --IGTPEFMAPELY---EEDYNELVDVYSFGMCVLEMFTCEYPYSE 234
+G ++MAPE EE Y E D YSF M + + T E P+ E
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 29 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 82
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 83 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 139
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHRDL+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 140 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI--NY 194
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 254
Query: 260 L 260
L
Sbjct: 255 L 255
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDAGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 84
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 85 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 142 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 256
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 257 MIMVKCWMIDADSRPKFRELIIE 279
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 19 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 73 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHRDL+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 130 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NY 184
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 244
Query: 260 L 260
L
Sbjct: 245 L 245
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 69 SPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-- 126
SPD +E +L+ L+H ++R Y V Q+ ITE +G+L ++ K
Sbjct: 51 SPDAF---LAEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGI 104
Query: 127 RVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG 186
++ I + A QI +G+ ++ R+ IHRDL+ NI V+ L KI D GLA ++
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIED 161
Query: 187 SK-SAHSVIGTP-EFMAPELYEEDYNELV---DVYSFGMCVLEMFT-CEYPYSECANPAQ 240
++ +A P ++ APE +Y DV+SFG+ + E+ T PY NP
Sbjct: 162 AEXTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 241 I------YKKVTSGKLPGAFYSIQDL 260
I Y+ V P Y + L
Sbjct: 220 IQNLERGYRMVRPDNCPEELYQLMRL 245
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 6/104 (5%)
Query: 131 RAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR-GSKS 189
RAI + QI+ GL +LH R+ +I+RDLK +N+ ++ G V+I DLGLA L+ G
Sbjct: 290 RAI-FYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTK 345
Query: 190 AHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPY 232
GTP FMAPE L E+Y+ VD ++ G+ + EM P+
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDYGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 77 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTPEF+APE+
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-- 189
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 79 EVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWAR 138
E+ +L TL H+ II++ D +K+ + E G+LR+Y ++ + + + +A+
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQ 124
Query: 139 QILQGLVYLHSRDPPVIHRDLKCDNIFV-NGHLGQVKIGDLGLAAILRGSKSAHSVI--- 194
QI +G+ YLH++ IHR+L N+ + N L VKIGD GLA + + V
Sbjct: 125 QICEGMAYLHAQH--YIHRNLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 195 GTPEF-MAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+P F APE L E + DV+SFG+ + E+ T
Sbjct: 181 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 25 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 79 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHRDL+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 136 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI--NY 190
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 250
Query: 260 L 260
L
Sbjct: 251 L 251
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 24 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 77
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 78 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 134
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHRDL+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 135 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI--NY 189
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 249
Query: 260 L 260
L
Sbjct: 250 L 250
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 32 FEEVLGKGAMKTVY----KAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL- 86
F VLGKG+ V K +E+ +++ V + + DD++ E +L+ L
Sbjct: 23 FLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQD-----DDVECTMVEKRVLALLD 77
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
K + + ++ + VD+ F+ E G L + ++ + +A +I GL +
Sbjct: 78 KPPFLTQLHSCFQTVDR--LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFF 135
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELY 205
LH R +I+RDLK DN+ ++ G +KI D G+ + + GTP+++APE+
Sbjct: 136 LHKRG--IIYRDLKLDNVMLDSE-GHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII 192
Query: 206 E-EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ Y + VD +++G+ + EM + P+
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 77
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 78 HVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 135 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 249
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 250 MIMRKCWMIDADSRPKFRELIIE 272
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 21 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 74
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 75 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 131
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHRDL+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 132 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NY 186
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 246
Query: 260 L 260
L
Sbjct: 247 L 247
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREAT---SPKANKEILDEAYVMASVDNP 111
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 112 HVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 168
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 169 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 225
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 226 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 283
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 284 MIMVKCWMIDADSRPKFRELIIE 306
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 18/268 (6%)
Query: 29 YGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKH 88
Y + EE LG GA V++ + G A V + D + + E+ +S L+H
Sbjct: 159 YDIHEE-LGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKETVRKEIQTMSVLRH 213
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLRE-YRKKYRRVDIRAIKSWARQILQGLVYL 147
+++ + ++ D ++ I E + G L E ++ ++ + RQ+ +GL ++
Sbjct: 214 PTLVNLHDAFEDDNEMVM--IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 148 HSRDPPVIHRDLKCDNI-FVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE 206
H + +H DLK +NI F ++K+ D GL A L +S GT EF APE+ E
Sbjct: 272 HENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE 329
Query: 207 -EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL---PGAFYSIQDLEA 262
+ D++S G+ + + P+ N + + V S AF I + +
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMDDSAFSGISE-DG 387
Query: 263 QRFIGRCLV-NASKRLSAKELLLDPFLA 289
+ FI + L+ + + R++ + L P+L
Sbjct: 388 KDFIRKLLLADPNTRMTIHQALEHPWLT 415
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 18/253 (7%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEV----AWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
VLGKG V++ + +V G A ++ ++R+ D +E ++L +KH
Sbjct: 24 VLGKGGYGKVFQ-VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I+ ++ K + I E + G L ++ + +I L +LH +
Sbjct: 83 IVDLIYAF-QTGGKLY-LILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK 140
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA--AILRGSKSAHSVIGTPEFMAPE-LYEE 207
+I+RDLK +NI +N H G VK+ D GL +I G+ + H+ GT E+MAPE L
Sbjct: 141 G--IIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVT-HTFCGTIEYMAPEILMRS 196
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIG 267
+N VD +S G + +M T P++ N + K+ KL Y Q EA+ +
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFT-GENRKKTIDKILKCKLNLPPYLTQ--EARDLLK 253
Query: 268 RCLV-NASKRLSA 279
+ L NA+ RL A
Sbjct: 254 KLLKRNAASRLGA 266
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 14/232 (6%)
Query: 28 RYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLK 87
RY L E+LG G M V+ A D +VA +R +L R P R E + L
Sbjct: 13 RYEL-GEILGFGGMSEVHLARDLRDHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALN 70
Query: 88 HDSIIRFY-TSWIDVDQKTFNFITEMFTSG-TLRE-YRKKYRRVDIRAIKSWARQILQGL 144
H +I+ Y T + +I + G TLR+ + RAI+ A Q L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA-DACQAL 129
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSA----HSVIGTPEFM 200
+ H +IHRD+K NI ++ VK+ D G+A + S ++ +VIGT +++
Sbjct: 130 NFSHQNG--IIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 201 APELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLP 251
+PE D + DVYS G + E+ T E P++ + + Y+ V +P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIP 238
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDRGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 85 TLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGL 144
+L+H +I+RF + + + E + G L E R + + +Q++ G+
Sbjct: 71 SLRHPNIVRF--KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLG-QVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE 203
Y H+ V HRDLK +N ++G ++KI D G + S +GTP ++APE
Sbjct: 129 SYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE 186
Query: 204 -LYEEDYN-ELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDL- 260
L +++Y+ ++ DV+S G+ + M YP+ + P K T ++ Y+I D
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK--TIHRILNVQYAIPDYV 244
Query: 261 ----EAQRFIGRCLV-NASKRLSAKEL 282
E + I R V + +KR+S E+
Sbjct: 245 HISPECRHLISRIFVADPAKRISIPEI 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 20 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 73
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 74 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 130
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHRDL+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 131 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NY 185
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 186 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 245
Query: 260 L 260
L
Sbjct: 246 L 246
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 19 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 73 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHRDL+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 130 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NY 184
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 244
Query: 260 L 260
L
Sbjct: 245 L 245
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 41/226 (18%)
Query: 32 FEEVLGKGAMKTVYKAI----DEVLGVE--VAWNQVRLNELMRSPDDLQRLYSEVHLLST 85
+E+ +GKG V+K V+ ++ + + E++ + QR EV ++S
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR---EVFIMSN 79
Query: 86 LKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQ------ 139
L H +I++ Y + + F+ G L +R +D W+ +
Sbjct: 80 LNHPNIVKLYGLMHNPPRMVMEFVP----CGDLY-----HRLLDKAHPIKWSVKLRLMLD 130
Query: 140 ILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ-----VKIGDLGLAAILRGSKSAHSV- 193
I G+ Y+ +++PP++HRDL+ NIF+ L + K+ D L+ +S HSV
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQS-LDENAPVCAKVADFSLS-----QQSVHSVS 184
Query: 194 --IGTPEFMAPELY---EEDYNELVDVYSFGMCVLEMFTCEYPYSE 234
+G ++MAPE EE Y E D YSF M + + T E P+ E
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 19 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 73 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHRDL+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 130 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI--NY 184
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 244
Query: 260 L 260
L
Sbjct: 245 L 245
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 14/232 (6%)
Query: 28 RYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLK 87
RY L E+LG G M V+ A D +VA +R +L R P R E + L
Sbjct: 13 RYEL-GEILGFGGMSEVHLARDLRDHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALN 70
Query: 88 HDSIIRFY-TSWIDVDQKTFNFITEMFTSG-TLRE-YRKKYRRVDIRAIKSWARQILQGL 144
H +I+ Y T + +I + G TLR+ + RAI+ A Q L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA-DACQAL 129
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSA----HSVIGTPEFM 200
+ H +IHRD+K NI ++ VK+ D G+A + S ++ +VIGT +++
Sbjct: 130 NFSHQNG--IIHRDVKPANILISA-TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
Query: 201 APELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLP 251
+PE D + DVYS G + E+ T E P++ + + Y+ V +P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 14/232 (6%)
Query: 28 RYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLK 87
RY L E+LG G M V+ A D +VA +R +L R P R E + L
Sbjct: 13 RYEL-GEILGFGGMSEVHLARDLRDHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALN 70
Query: 88 HDSIIRFY-TSWIDVDQKTFNFITEMFTSG-TLRE-YRKKYRRVDIRAIKSWARQILQGL 144
H +I+ Y T + +I + G TLR+ + RAI+ A Q L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA-DACQAL 129
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSA----HSVIGTPEFM 200
+ H +IHRD+K NI ++ VK+ D G+A + S ++ +VIGT +++
Sbjct: 130 NFSHQNG--IIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 201 APELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLP 251
+PE D + DVYS G + E+ T E P++ + + Y+ V +P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRL-NELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
LG+G VYKAID V VA ++RL +E P R EV LL L+H +II
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR---EVSLLKELQHRNIIEL 98
Query: 95 YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
S I + + + I E + L++Y K V +R IKS+ Q++ G+ + HSR
Sbjct: 99 -KSVIHHNHR-LHLIFE-YAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR--C 153
Query: 155 IHRDLKCDNIFVN----GHLGQVKIGDLGLAAI--LRGSKSAHSVIGTPEFMAPE--LYE 206
+HRDLK N+ ++ +KIGD GLA + + H +I T + PE L
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPEILLGS 212
Query: 207 EDYNELVDVYSFGMCVLEMF 226
Y+ VD++S EM
Sbjct: 213 RHYSTSVDIWSIACIWAEML 232
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 151
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 152 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 207
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 268 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 165
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 166 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 221
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 282 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 329
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDGGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 164
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 165 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 220
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 221 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 280
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 281 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 328
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 165
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + T + APE+ YN
Sbjct: 166 -IIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMXGXVATRWYRAPEIMLNWMHYN 221
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 282 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 329
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 85 TLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGL 144
+L+H +I+RF + + + E + G L E R + + +Q++ G+
Sbjct: 70 SLRHPNIVRF--KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 127
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLG-QVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE 203
Y H+ V HRDLK +N ++G ++KI D G + S +GTP ++APE
Sbjct: 128 SYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE 185
Query: 204 -LYEEDYN-ELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDL- 260
L +++Y+ ++ DV+S G+ + M YP+ + P K T ++ Y+I D
Sbjct: 186 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK--TIHRILNVQYAIPDYV 243
Query: 261 ----EAQRFIGRCLV-NASKRLSAKEL 282
E + I R V + +KR+S E+
Sbjct: 244 HISPECRHLISRIFVADPAKRISIPEI 270
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 97
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 98 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 155
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 156 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 211
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 212 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 271
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 272 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 319
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 141
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 142 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 197
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 258 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 141
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + T + APE+ YN
Sbjct: 142 -IIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYN 197
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 258 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTD-DHVQFLIYQILRGLKYIHSAD- 141
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D GLA + + + T + APE+ YN
Sbjct: 142 -IIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 197
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 258 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 118/253 (46%), Gaps = 18/253 (7%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEV----AWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
VLGKG V++ + +V G A ++ ++R+ D +E ++L +KH
Sbjct: 24 VLGKGGYGKVFQ-VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I+ ++ K + I E + G L ++ + +I L +LH +
Sbjct: 83 IVDLIYAF-QTGGKLY-LILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK 140
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA--AILRGSKSAHSVIGTPEFMAPE-LYEE 207
+I+RDLK +NI +N H G VK+ D GL +I G+ + H GT E+MAPE L
Sbjct: 141 G--IIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVT-HXFCGTIEYMAPEILMRS 196
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIG 267
+N VD +S G + +M T P++ N + K+ KL Y Q EA+ +
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFT-GENRKKTIDKILKCKLNLPPYLTQ--EARDLLK 253
Query: 268 RCLV-NASKRLSA 279
+ L NA+ RL A
Sbjct: 254 KLLKRNAASRLGA 266
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 14 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 67
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 68 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 124
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHRDL+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 125 --YIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI--NY 179
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 239
Query: 260 L 260
L
Sbjct: 240 L 240
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 85 TLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGL 144
+L+H +I+RF + + I E + G L E R + + +Q+L G+
Sbjct: 72 SLRHPNIVRF--KEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV 129
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLG-QVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE 203
Y HS + HRDLK +N ++G ++KI D G + S +GTP ++APE
Sbjct: 130 SYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE 187
Query: 204 -LYEEDYN-ELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQD-- 259
L ++Y+ ++ DV+S G+ + M YP+ + P Y+K T ++ YSI D
Sbjct: 188 VLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRK-TIQRILSVKYSIPDDI 245
Query: 260 ---LEAQRFIGRCLV-NASKRLSAKEL 282
E I R V + + R+S E+
Sbjct: 246 RISPECCHLISRIFVADPATRISIPEI 272
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 130/293 (44%), Gaps = 40/293 (13%)
Query: 29 YGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKH 88
Y L E+LG+GA V A+ G E A V++ E ++ R++ EV L +
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYA---VKIIE-KQAGHSRSRVFREVETLYQCQG 69
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
+ I + + D + F + E G++ + +K + + R R + L +LH
Sbjct: 70 NKNILELIEFFEDDTR-FYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH 128
Query: 149 SRDPPVIHRDLKCDNIFVNG--HLGQVKIGDLGLAAILRGSKSAHSV--------IGTPE 198
++ + HRDLK +NI + VKI D L + ++ + S + G+ E
Sbjct: 129 TKG--IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 199 FMAPELYE------EDYNELVDVYSFGMCVLEMFT------------CEYPYSECANPAQ 240
+MAPE+ E Y++ D++S G+ + M + C + E Q
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQ 246
Query: 241 --IYKKVTSGK--LPGAFYSIQDLEAQRFIGRCLV-NASKRLSAKELLLDPFL 288
+++ + GK P ++ EA+ I + LV +A +RLSA ++L P++
Sbjct: 247 NKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 81
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T I ++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 82 HVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 139 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 253
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 254 MIMVKCWMIDADSRPKFRELIIE 276
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 77
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T I ++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 78 HVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 135 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 249
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 250 MIMVKCWMIDADSRPKFRELIIE 272
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 78
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T I ++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 79 HVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 136 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 250
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 251 MIMVKCWMIDADSRPKFRELIIE 273
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 78
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T I ++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 79 HVCRLLGICL---TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 136 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 250
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 251 MIMVKCWMIDADSRPKFRELIIE 273
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 79
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T I ++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 80 HVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 137 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 251
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 252 MIMVKCWMIDADSRPKFRELIIE 274
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 13/196 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LG+G TVYK ++ VA ++RL +P R EV LL LKH +I+ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR---EVSLLKDLKHANIVTLH 66
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRR-VDIRAIKSWARQILQGLVYLHSRDPPV 154
I +K+ + E + L++Y +++ +K + Q+L+GL Y H + V
Sbjct: 67 D--IIHTEKSLTLVFE-YLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK--V 121
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPE--LYEEDYNE 211
+HRDLK N+ +N G++K+ D GLA A +K+ + + T + P+ L DY+
Sbjct: 122 LHRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYST 180
Query: 212 LVDVYSFGMCVLEMFT 227
+D++ G EM T
Sbjct: 181 QIDMWGVGCIFYEMAT 196
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 80
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T I ++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 81 HVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 138 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 252
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 253 MIMVKCWMIDADSRPKFRELIIE 275
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 22/279 (7%)
Query: 29 YGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTL 86
Y + EE LG GA V++ +++ G +V + + + +P L + + +E+ +++ L
Sbjct: 53 YDILEE-LGSGAFGVVHRCVEKATG------RVFVAKFINTPYPLDKYTVKNEISIMNQL 105
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTL--REYRKKYRRVDIRAIKSWARQILQGL 144
H +I + ++ D+ I E + G L R + Y+ + I ++ RQ +GL
Sbjct: 106 HHPKLINLHDAF--EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVI-NYMRQACEGL 162
Query: 145 VYLHSRDPPVIHRDLKCDNIFV-NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE 203
++H ++H D+K +NI VKI D GLA L + T EF APE
Sbjct: 163 KHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPE 220
Query: 204 LYE-EDYNELVDVYSFGMCVLEMFTCEYPYS--ECANPAQIYKKVTSGKLPGAFYSIQDL 260
+ + E D+++ G+ + + P++ + Q K+ AF S+
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP- 279
Query: 261 EAQRFIGRCLVN-ASKRLSAKELLLDPFLASDEVKLLSK 298
EA+ FI L KRL+ + L P+L D L S+
Sbjct: 280 EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSR 318
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 68 RSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR 127
R P ++++Y E+ +L L H ++++ D ++ + E+ G + E +
Sbjct: 77 RGP--IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLKP 133
Query: 128 VDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS 187
+ + + + +++G+ YLH + +IHRD+K N+ V G G +KI D G++ +GS
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLV-GEDGHIKIADFGVSNEFKGS 190
Query: 188 KSAHS-VIGTPEFMAPELYEED----YNELVDVYSFGMCVLEMFTCEYPY 232
+ S +GTP FMAPE E + +DV++ G+ + + P+
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 79
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 80 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D G A +L + + G ++MA E +
Sbjct: 137 DRR--LVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 251
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 252 MIMRKCWMIDADSRPKFRELIIE 274
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G+ VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI GLA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILGFGLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VL GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 77
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 78 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 135 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 249
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 250 MIMVKCWMIDADSRPKFRELIIE 272
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 77
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 78 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D G A +L + + G ++MA E +
Sbjct: 135 DRR--LVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 249
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 250 MIMVKCWMIDADSRPKFRELIIE 272
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK I E + + VA +R N SP + + E ++++ +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT---SPKANKEILDEAYVMAGVGSP 79
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T +T++ G L ++ ++ R R+ + + +W QI +G+ YL
Sbjct: 80 YVSRLLGICL---TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE 136
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
D ++HRDL N+ V VKI D GLA +L ++ + G ++MA E +
Sbjct: 137 --DVRLVHRDLAARNVLVKSP-NHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 205 YEEDYNELVDVYSFGMCVLEMFT 227
+ DV+S+G+ V E+ T
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 127/272 (46%), Gaps = 27/272 (9%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
+ +E +G G+ + + + +E A + ++ R P + + LL +H +
Sbjct: 30 VVKETIGVGSYSECKRCVHKATNMEYAVKVI--DKSKRDPSEEIEI-----LLRYGQHPN 82
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
II + D K +TE+ G L + + + R I + + YLHS+
Sbjct: 83 IITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTP----EFMAPE 203
V+HRDLK NI +G+ ++I D G A LR + + ++ TP F+APE
Sbjct: 141 G--VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR---AENGLLMTPCYTANFVAPE 195
Query: 204 -LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECAN--PAQIYKKVTSGK--LPGAFYSIQ 258
L + Y+E D++S G+ + M P++ + P +I ++ SGK L G ++
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTV 255
Query: 259 DLEAQRFIGRCL-VNASKRLSAKELLLDPFLA 289
A+ + + L V+ +RL+AK++L P++
Sbjct: 256 SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVT 287
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 27/275 (9%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
+ +E +G G+ + + + +E A + ++ R P + + LL +H +
Sbjct: 30 VVKETIGVGSYSECKRCVHKATNMEYAVKVI--DKSKRDPSEEIEI-----LLRYGQHPN 82
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
II + D K +TE+ G L + + + R I + + YLHS+
Sbjct: 83 IITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTP----EFMAPE 203
V+HRDLK NI +G+ ++I D G A LR + + ++ TP F+APE
Sbjct: 141 G--VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR---AENGLLMTPCYTANFVAPE 195
Query: 204 -LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECAN--PAQIYKKVTSGK--LPGAFYSIQ 258
L + Y+E D++S G+ + M P++ + P +I ++ SGK L G ++
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTV 255
Query: 259 DLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDE 292
A+ + + L V+ +RL+AK++L P++ +
Sbjct: 256 SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKD 290
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 84
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 85 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D G A +L + + G ++MA E +
Sbjct: 142 DRR--LVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 256
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 257 MIMVKCWMIDADSRPKFRELIIE 279
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 32 FEEVLGKGAMKTVY----KAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLS-TL 86
F VLGKG+ V K DE+ V++ V + + DD++ E +L+
Sbjct: 345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD-----DDVECTMVEKRVLALPG 399
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
K + + ++ + +D+ F+ E G L + ++ R +A +I GL +
Sbjct: 400 KPPFLTQLHSCFQTMDR--LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA--ILRGSKSAHSVIGTPEFMAPEL 204
L S+ +I+RDLK DN+ ++ G +KI D G+ I G + GTP+++APE+
Sbjct: 458 LQSKG--IIYRDLKLDNVMLDSE-GHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAPEI 513
Query: 205 YE-EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ Y + VD ++FG+ + EM + P+
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 79 EVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWAR 138
E+ +L TL H+ I+++ D +K+ + E G+LR+Y ++ V + + +A+
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQ 119
Query: 139 QILQGLVYLHSRDPPVIHRDLKCDNIFV-NGHLGQVKIGDLGLAAILRGSKSAHSVI--- 194
QI +G+ YLH++ IHR L N+ + N L VKIGD GLA + + V
Sbjct: 120 QICEGMAYLHAQH--YIHRALAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDG 175
Query: 195 GTPEF-MAPELYEE-DYNELVDVYSFGMCVLEMFT 227
+P F APE +E + DV+SFG+ + E+ T
Sbjct: 176 DSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 79 EVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWAR 138
E+ +L TL H+ I+++ D +K+ + E G+LR+Y ++ V + + +A+
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQ 118
Query: 139 QILQGLVYLHSRDPPVIHRDLKCDNIFV-NGHLGQVKIGDLGLAAILRGSKSAHSVI--- 194
QI +G+ YLH++ IHR L N+ + N L VKIGD GLA + + V
Sbjct: 119 QICEGMAYLHAQH--YIHRALAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDG 174
Query: 195 GTPEF-MAPELYEE-DYNELVDVYSFGMCVLEMFT 227
+P F APE +E + DV+SFG+ + E+ T
Sbjct: 175 DSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 18/266 (6%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKHDSI 91
E LG G V K ++ G++ A ++ S + R + EV +L ++H ++
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 92 IRFYTSWIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I + + + KT I E+ G L ++ + + + +QIL G+ YLHS
Sbjct: 77 ITLHEVY---ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 151 DPPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE 207
+ H DLK +NI + N ++KI D GLA + ++ GTP F+APE+
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIV-- 189
Query: 208 DYNEL---VDVYSFGMCVLEMFTCEYPY-SECANPAQIYKKVTSGKLPGAFYSIQDLEAQ 263
+Y L D++S G+ + + P+ + + + ++S A+
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFL 288
FI R LV + KR++ ++ L P++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
E LG G V+ +G +V + L + +E +L+ L+H ++R
Sbjct: 15 ERLGAGQFGEVW------MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 68
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR--RVDIRAIKSWARQILQGLVYLHSRD 151
Y V Q+ ITE +G+L ++ K ++ I + A QI +G+ ++ R+
Sbjct: 69 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 125
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPELYEEDY 209
IHR+L+ NI V+ L KI D GLA ++ ++ +A P ++ APE +Y
Sbjct: 126 --YIHRNLRAANILVSDTL-SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI--NY 180
Query: 210 NELV---DVYSFGMCVLEMFT-CEYPYSECANPAQI------YKKVTSGKLPGAFYSIQD 259
DV+SFG+ + E+ T PY NP I Y+ V P Y +
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 240
Query: 260 L 260
L
Sbjct: 241 L 241
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VL GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 84
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T IT++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 85 HVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 142 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 256
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 257 MIMVKCWMIDADSRPKFRELIIE 279
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 32 FEEVLGKGAMKTVY----KAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST-L 86
F VLGKG+ V K DE+ V++ V + + DD++ E +L+
Sbjct: 24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD-----DDVECTMVEKRVLALPG 78
Query: 87 KHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
K + + ++ + +D+ F+ E G L + ++ R +A +I GL +
Sbjct: 79 KPPFLTQLHSCFQTMDR--LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA--ILRGSKSAHSVIGTPEFMAPEL 204
L S+ +I+RDLK DN+ ++ G +KI D G+ I G + GTP+++APE+
Sbjct: 137 LQSKG--IIYRDLKLDNVMLDSE-GHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAPEI 192
Query: 205 YE-EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ Y + VD ++FG+ + EM + P+
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D K +TE+ G L + + + R + I + + YLH++ V+HRDLK
Sbjct: 87 DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG--VVHRDLKP 144
Query: 162 DNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTP----EFMAPELYE-EDYNELV 213
NI +G+ ++I D G A LR + + ++ TP F+APE+ E + Y+
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLR---AENGLLMTPCYTANFVAPEVLERQGYDAAC 201
Query: 214 DVYSFGMCVLEMFTCEYPYSECAN--PAQIYKKVTSGK--LPGAFYSIQDLEAQRFIGRC 269
D++S G+ + M T P++ + P +I ++ SGK L G +++ A+ + +
Sbjct: 202 DIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKM 261
Query: 270 L-VNASKRLSAKELLLDPFLA 289
L V+ +RL+A +L P++
Sbjct: 262 LHVDPHQRLTAALVLRHPWIV 282
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYS----EVHLLSTLKHD 89
E +G+G TV+KA + VA +VRL+ DD + + S E+ LL LKH
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLD------DDDEGVPSSALREICLLKELKHK 61
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+I+R + + T F F L++Y +D +KS+ Q+L+GL + H
Sbjct: 62 NIVRLHDVLHSDKKLTLVF---EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV-IGTPEFMAPELY-- 205
SR+ V+HRDLK N+ +N + G++K+ D GLA +S + T + P++
Sbjct: 119 SRN--VLHRDLKPQNLLINRN-GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYP 231
+ Y+ +D++S G E+ P
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 15/238 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D L +VA +L+ +S +R Y E+ LL LKH+++I
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T ++ + ++ L K D ++ Q+L+GL Y+HS
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSD-EHVQFLVYQLLRGLKYIHSAG- 151
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN +++I D GLA + + + T + APE+ YN
Sbjct: 152 -IIHRDLKPSNVAVNED-SELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFI 266
+ VD++S G + E+ + +P S+ + + +V P I A+ +I
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 265
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 44/290 (15%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA V A+D G +VA +L +S +R Y E+ LL ++H+++I
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIK--KLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +D T +F M GT K+ ++ I+ Q+L+GL Y+H+
Sbjct: 91 DVFTPDETLDDFT-DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG- 148
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE--LYEEDYN 210
+IHRDLK N+ VN ++KI D GLA + + T + APE L Y
Sbjct: 149 -IIHRDLKPGNLAVNEDC-ELKILDFGLAR--QADSEMXGXVVTRWYRAPEVILNWMRYT 204
Query: 211 ELVDVYSFGMCVLEMFTCEYPYSECAN--------------PAQIYKKVTSGKLPGAFYS 256
+ VD++S G + EM T + + + PA+ +++ S +
Sbjct: 205 QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG 264
Query: 257 IQDLEAQRFIGRCLVNAS----------------KRLSAKELLLDPFLAS 290
+ +LE + F L NAS +R++A E L P+ S
Sbjct: 265 LPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 91/176 (51%), Gaps = 12/176 (6%)
Query: 72 DLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRK--KYRRVD 129
++ +E +++ TL+HD +++ + V ++ ITE G+L ++ K + +
Sbjct: 53 SVEAFLAEANVMKTLQHDKLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 109
Query: 130 IRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK- 188
+ + ++ QI +G+ ++ R+ IHRDL+ NI V+ L KI D GLA ++ ++
Sbjct: 110 LPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARVIEDNEY 166
Query: 189 SAHSVIGTP-EFMAPELYE-EDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQI 241
+A P ++ APE + DV+SFG+ ++E+ T PY +NP I
Sbjct: 167 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 85 TLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGL 144
+L+H +I+RF + + + E + G L E R + + +Q++ G+
Sbjct: 71 SLRHPNIVRF--KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLG-QVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE 203
Y H+ V HRDLK +N ++G ++KI G + S +GTP ++APE
Sbjct: 129 SYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPE 186
Query: 204 -LYEEDYN-ELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDL- 260
L +++Y+ ++ DV+S G+ + M YP+ + P K T ++ Y+I D
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK--TIHRILNVQYAIPDYV 244
Query: 261 ----EAQRFIGRCLV-NASKRLSAKEL 282
E + I R V + +KR+S E+
Sbjct: 245 HISPECRHLISRIFVADPAKRISIPEI 271
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 36/224 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDD--LQRL-YSEVHLLSTLKHDSI 91
++G+G+ V K ++ G VA + + + S DD ++++ E+ LL L+H+++
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVA-----IKKFLESDDDKMVKKIAMREIKLLKQLRHENL 86
Query: 92 I----------RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQIL 141
+ R+Y + VD + + E+F +G +D + ++ + QI+
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDL-ELFPNG-----------LDYQVVQKYLFQII 134
Query: 142 QGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-VIGTPEFM 200
G+ + HS + +IHRD+K +NI V+ G VK+ D G A L + + T +
Sbjct: 135 NGIGFCHSHN--IIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR 191
Query: 201 APELYEED--YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY 242
APEL D Y + VDV++ G V EMF E + ++ Q+Y
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+LG+G VYK G VA RL E +LQ +EV ++S H +++R
Sbjct: 45 ILGRGGFGKVYKG-RLADGTLVAVK--RLKEERXQGGELQ-FQTEVEMISMAVHRNLLRL 100
Query: 95 YTSWIDVDQK--TFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR-D 151
+ ++ + ++ + LRE + +D + A +GL YLH D
Sbjct: 101 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD 160
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL--RGSKSAHSVIGTPEFMAPE-LYEED 208
P +IHRD+K NI ++ V +GD GLA ++ + +V GT +APE L
Sbjct: 161 PKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGK 219
Query: 209 YNELVDVYSFGMCVLEMFTCEYPY 232
+E DV+ +G+ +LE+ T + +
Sbjct: 220 SSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 15/238 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D L +VA +L+ +S +R Y E+ LL LKH+++I
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T ++ + ++ L K D ++ Q+L+GL Y+HS
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSD-EHVQFLVYQLLRGLKYIHSAG- 151
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN +++I D GLA + + + T + APE+ YN
Sbjct: 152 -IIHRDLKPSNVAVNED-SELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFI 266
+ VD++S G + E+ + +P S+ + + +V P I A+ +I
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 265
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 15/238 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D L +VA +L+ +S +R Y E+ LL LKH+++I
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T ++ + ++ L K D ++ Q+L+GL Y+HS
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSD-EHVQFLVYQLLRGLKYIHSAG- 143
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN +++I D GLA + + + T + APE+ YN
Sbjct: 144 -IIHRDLKPSNVAVNEDC-ELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFI 266
+ VD++S G + E+ + +P S+ + + +V P I A+ +I
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 257
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 73 LQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRK--KYRRVDI 130
++ +E +++ TL+HD +++ + V ++ ITE G+L ++ K + + +
Sbjct: 227 VEAFLAEANVMKTLQHDKLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 283
Query: 131 RAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-S 189
+ ++ QI +G+ ++ R+ IHRDL+ NI V+ L KI D GLA ++ ++ +
Sbjct: 284 PKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYT 340
Query: 190 AHSVIGTP-EFMAPELYE-EDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQI 241
A P ++ APE + DV+SFG+ ++E+ T PY +NP I
Sbjct: 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 79
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T I ++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 80 HVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D G A +L + + G ++MA E +
Sbjct: 137 DRR--LVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 251
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 252 MIMRKCWMIDADSRPKFRELIIE 274
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 128/269 (47%), Gaps = 26/269 (9%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
+F EVLG GA V+ + G A ++ + R L +E+ +L +KH++
Sbjct: 12 IFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSS----LENEIAVLKKIKHEN 67
Query: 91 IIRFYTSWIDVDQKTFNF--ITEMFTSGTLREY---RKKYRRVDIRAIKSWARQILQGLV 145
I+ D+ + T ++ + ++ + G L + R Y D + +Q+L +
Sbjct: 68 IVTLE----DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLV---IQQVLSAVK 120
Query: 146 YLHSRDPPVIHRDLKCDNI--FVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE 203
YLH ++HRDLK +N+ ++ I D GL+ + + + + GTP ++APE
Sbjct: 121 YLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS-TACGTPGYVAPE 177
Query: 204 -LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG--KLPGAFYSIQDL 260
L ++ Y++ VD +S G+ + + C YP +++++K+ G + F+
Sbjct: 178 VLAQKPYSKAVDCWSIGV-ITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISE 236
Query: 261 EAQRFIGRCL-VNASKRLSAKELLLDPFL 288
A+ FI L + ++R + ++ L P++
Sbjct: 237 SAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 79
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T I ++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 80 HVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D G A +L + + G ++MA E +
Sbjct: 137 DRR--LVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 251
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 252 MIMVKCWMIDADSRPKFRELIIE 274
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 81
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T I ++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 82 HVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D G A +L + + G ++MA E +
Sbjct: 139 DRR--LVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 253
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 254 MIMVKCWMIDADSRPKFRELIIE 276
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 106 FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIF 165
+FI ++ G L + ++ ++ +A +I+ GL ++H+R V++RDLK NI
Sbjct: 266 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANIL 323
Query: 166 VNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEED--YNELVDVYSFGMCVL 223
++ H G V+I DLGLA K H+ +GT +MAPE+ ++ Y+ D +S G +
Sbjct: 324 LDEH-GHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 381
Query: 224 EMFTCEYPYSE 234
++ P+ +
Sbjct: 382 KLLRGHSPFRQ 392
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 106 FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIF 165
+FI ++ G L + ++ ++ +A +I+ GL ++H+R V++RDLK NI
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANIL 324
Query: 166 VNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEED--YNELVDVYSFGMCVL 223
++ H G V+I DLGLA K H+ +GT +MAPE+ ++ Y+ D +S G +
Sbjct: 325 LDEH-GHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 224 EMFTCEYPYSE 234
++ P+ +
Sbjct: 383 KLLRGHSPFRQ 393
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 106 FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIF 165
+FI ++ G L + ++ ++ +A +I+ GL ++H+R V++RDLK NI
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANIL 324
Query: 166 VNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEED--YNELVDVYSFGMCVL 223
++ H G V+I DLGLA K H+ +GT +MAPE+ ++ Y+ D +S G +
Sbjct: 325 LDEH-GHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 224 EMFTCEYPYSE 234
++ P+ +
Sbjct: 383 KLLRGHSPFRQ 393
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 106 FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIF 165
+FI ++ G L + ++ ++ +A +I+ GL ++H+R V++RDLK NI
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANIL 324
Query: 166 VNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEED--YNELVDVYSFGMCVL 223
++ H G V+I DLGLA K H+ +GT +MAPE+ ++ Y+ D +S G +
Sbjct: 325 LDEH-GHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382
Query: 224 EMFTCEYPYSE 234
++ P+ +
Sbjct: 383 KLLRGHSPFRQ 393
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G GA +V A D G VA +L+ +S +R Y E+ LL +KH+++I
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 95 --YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ ++ L K + D ++ QIL+GL Y+HS D
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKYIHSAD- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE--DYN 210
+IHRDLK N+ VN ++KI D LA + + + T + APE+ YN
Sbjct: 146 -IIHRDLKPSNLAVNEDC-ELKILDFYLARHTDDEMTGY--VATRWYRAPEIMLNWMHYN 201
Query: 211 ELVDVYSFGMCVLEMFTCE--YPYSE-----------CANP-AQIYKKVTSGKLPGAFYS 256
+ VD++S G + E+ T +P ++ P A++ KK++S S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 257 IQDLE----AQRFIG-----------RCLVNASKRLSAKELLLDPFLA 289
+ + A FIG ++++ KR++A + L + A
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 22/263 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VL GA TVYK + E + + VA ++R SP + + E ++++++ +
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNP 84
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
+ R + T I ++ G L +Y ++++ + + + +W QI +G+ YL
Sbjct: 85 HVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPE-L 204
R ++HRDL N+ V VKI D GLA +L + + G ++MA E +
Sbjct: 142 DRR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG-KLPGAFYSIQDLEAQ 263
Y DV+S+G+ V E+ T + ++I + G +LP I ++
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTIDVY 256
Query: 264 RFIGRC-LVNASKRLSAKELLLD 285
+ +C +++A R +EL+++
Sbjct: 257 MIMVKCWMIDADSRPKFRELIIE 279
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 137/296 (46%), Gaps = 46/296 (15%)
Query: 29 YGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQ-RLYSEVHLLSTLK 87
Y L E+VLG+GA V I+ + E A V++ E + P ++ R++ EV +L +
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYA---VKIIE--KQPGHIRSRVFREVEMLYQCQ 68
Query: 88 -HDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
H +++ + + D+ F + E G++ + K R + + + L +
Sbjct: 69 GHRNVLELIEFFEEEDR--FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDF 126
Query: 147 LHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAAILRGSKSAHSV--------IGT 196
LH++ + HRDLK +NI + VKI D GL + ++ + + G+
Sbjct: 127 LHNKG--IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 197 PEFMAPELYE------EDYNELVDVYSFGMCVLEMFTCEYP------YSEC------ANP 238
E+MAPE+ E Y++ D++S G+ +L + YP S+C A P
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGV-ILYILLSGYPPFVGRCGSDCGWDRGEACP 243
Query: 239 A---QIYKKVTSGK--LPGAFYSIQDLEAQRFIGRCLV-NASKRLSAKELLLDPFL 288
A +++ + GK P ++ A+ I + LV +A +RLSA ++L P++
Sbjct: 244 ACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYS----EVHLLSTLKHD 89
E +G+G TV+KA + VA +VRL+ DD + + S E+ LL LKH
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLD------DDDEGVPSSALREICLLKELKHK 61
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR-VDIRAIKSWARQILQGLVYLH 148
+I+R + + T F F L++Y +D +KS+ Q+L+GL + H
Sbjct: 62 NIVRLHDVLHSDKKLTLVF---EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV-IGTPEFMAPELY-- 205
SR+ V+HRDLK N+ +N + G++K+ + GLA +S + T + P++
Sbjct: 119 SRN--VLHRDLKPQNLLINRN-GELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYP 231
+ Y+ +D++S G E+ P
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR-SPDDLQRL----YSEVHLLSTLK 87
+E+LG+G V + I + E A + + S +++Q L EV +L +
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 81
Query: 88 -HDSIIRFYTSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLV 145
H +II+ ++ + TF F+ ++ G L +Y + + + + R +L+ +
Sbjct: 82 GHPNIIQLKDTY---ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 146 YLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY 205
LH + ++HRDLK +NI ++ + +K+ D G + L + SV GTP ++APE+
Sbjct: 139 ALHKLN--IVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEII 195
Query: 206 E-------EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAF---- 254
E Y + VD++S G+ + + P+ + + + SG
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMIMSGNYQFGSPEWD 254
Query: 255 -YS--IQDLEAQRFIGRCLVNASKRLSAKELLLDPFL 288
YS ++DL RF+ +V KR +A+E L PF
Sbjct: 255 DYSDTVKDL-VSRFL---VVQPQKRYTAEEALAHPFF 287
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 85 TLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGL 144
+L+H +I+RF + + + E + G L E R + + +Q++ G+
Sbjct: 71 SLRHPNIVRF--KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLG-QVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE 203
Y H+ V HRDLK +N ++G ++KI G + +GTP ++APE
Sbjct: 129 SYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPE 186
Query: 204 -LYEEDYN-ELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDL- 260
L +++Y+ ++ DV+S G+ + M YP+ + P K T ++ Y+I D
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK--TIHRILNVQYAIPDYV 244
Query: 261 ----EAQRFIGRCLV-NASKRLSAKEL 282
E + I R V + +KR+S E+
Sbjct: 245 HISPECRHLISRIFVADPAKRISIPEI 271
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA +V AID+ G +VA +L+ +S +R Y E+ LL ++H+++I
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 96 TSWIDVD--QKTFNFITEM-FTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ + ++F M F L++ + I+ Q+L+GL Y+HS
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE--LYEEDYN 210
V+HRDLK N+ VN ++KI D GLA + + V T + APE L YN
Sbjct: 147 -VVHRDLKPGNLAVNEDC-ELKILDFGLARHADAEMTGYVV--TRWYRAPEVILSWMHYN 202
Query: 211 ELVDVYSFGMCVLEMFT 227
+ VD++S G + EM T
Sbjct: 203 QTVDIWSVGCIMAEMLT 219
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 129/269 (47%), Gaps = 12/269 (4%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LGKG VY A ++ VA + +++ + + Q L E+ + + L H +I+R Y
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQ-LRREIEIQAHLHHPNILRLY 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVI 155
+ D++ I E G L + +K D + + ++ L+Y H + VI
Sbjct: 90 NYF--YDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK--VI 145
Query: 156 HRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVD 214
HRD+K +N+ + G++KI D G ++ S ++ GT +++ PE+ E +NE VD
Sbjct: 146 HRDIKPENLLLGL-KGELKIADFGW-SVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVD 203
Query: 215 VYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLV-NA 273
++ G+ E+ P+ E A+ + Y+++ L F + AQ I + L N
Sbjct: 204 LWCIGVLCYELLVGNPPF-ESASHNETYRRIVKVDL--KFPASVPTGAQDLISKLLRHNP 260
Query: 274 SKRLSAKELLLDPFLASDEVKLLSKTKLN 302
S+RL ++ P++ ++ ++L + L
Sbjct: 261 SERLPLAQVSAHPWVRANSRRVLPPSALQ 289
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 38/216 (17%)
Query: 34 EVLGKGAMKTVYKA--IDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
EV +G V+KA ++E + V++ ++ Q Y EV+ L +KH++I
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIF--------PIQDKQSWQNEY-EVYSLPGMKHENI 80
Query: 92 IRFYT-----SWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
++F + +DVD IT G+L ++ K V + A + +GL Y
Sbjct: 81 LQFIGAEKRGTSVDVD---LWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAY 136
Query: 147 LH--------SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSA---HSVIG 195
LH P + HRD+K N+ + +L I D GLA KSA H +G
Sbjct: 137 LHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEAGKSAGDTHGQVG 195
Query: 196 TPEFMAPEL------YEEDYNELVDVYSFGMCVLEM 225
T +MAPE+ ++ D +D+Y+ G+ + E+
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 14/242 (5%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KHDS 90
+ ++GKG+ V KA D V E W +++ + L + EV LL + KHD+
Sbjct: 39 IDSLIGKGSFGQVVKAYDRV---EQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDT 93
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIKSWARQILQGLVY 146
+++Y + N + +F + Y +R V + + +A+Q+ L++
Sbjct: 94 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 153
Query: 147 LHSRDPPVIHRDLKCDNIFV-NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-L 204
L + + +IH DLK +NI + N +KI D G + L + + I + + +PE L
Sbjct: 154 LATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVL 211
Query: 205 YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQR 264
Y+ +D++S G ++EM T E +S Q+ K V +P A Q +A++
Sbjct: 212 LGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARK 271
Query: 265 FI 266
F
Sbjct: 272 FF 273
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 14/241 (5%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KHDSI 91
+ ++GKG+ V KA D V E W +++ + L + EV LL + KHD+
Sbjct: 59 DSLIGKGSFGQVVKAYDRV---EQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTE 113
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIKSWARQILQGLVYL 147
+++Y + N + +F + Y +R V + + +A+Q+ L++L
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 148 HSRDPPVIHRDLKCDNIFV-NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LY 205
+ + +IH DLK +NI + N +KI D G + L + + I + + +PE L
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLL 231
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRF 265
Y+ +D++S G ++EM T E +S Q+ K V +P A Q +A++F
Sbjct: 232 GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKF 291
Query: 266 I 266
Sbjct: 292 F 292
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 12/206 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR----SPDDLQRLYSEVHLLSTLKHDSI 91
LG GA V+ A+D+ EV ++ +++ L ++ E+ +LS ++H +I
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGT-LREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
I+ I +Q F + E SG L + ++ R+D RQ++ + YL +
Sbjct: 92 IKVLD--IFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK 149
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEED-- 208
D +IHRD+K +NI + +K+ D G AA L K ++ GT E+ APE+ +
Sbjct: 150 D--IIHRDIKDENIVIAEDF-TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPY 206
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSE 234
++++S G+ + + E P+ E
Sbjct: 207 RGPELEMWSLGVTLYTLVFEENPFCE 232
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 102 DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKC 161
D K +TE+ G L + + + R + I + + YLH++ V+HRDLK
Sbjct: 87 DGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG--VVHRDLKP 144
Query: 162 DNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTP----EFMAPELYE-EDYNELV 213
NI +G+ ++I D G A LR + + ++ TP F+APE+ E + Y+
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLR---AENGLLXTPCYTANFVAPEVLERQGYDAAC 201
Query: 214 DVYSFGMCVLEMFTCEYPYSECAN--PAQIYKKVTSGK--LPGAFYSIQDLEAQRFIGRC 269
D++S G+ + T P++ + P +I ++ SGK L G +++ A+ + +
Sbjct: 202 DIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKX 261
Query: 270 L-VNASKRLSAKELLLDPFL 288
L V+ +RL+A +L P++
Sbjct: 262 LHVDPHQRLTAALVLRHPWI 281
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 14/237 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA +V AID+ G +VA +L+ +S +R Y E+ LL ++H+++I
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDI--RAIKSWARQILQGLVYLHSRDPP 153
+ NF ++ +K ++ I+ Q+L+GL Y+HS
Sbjct: 108 DVFTPASSLR-NFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG-- 164
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE--LYEEDYNE 211
V+HRDLK N+ VN ++KI D GLA + + V T + APE L YN+
Sbjct: 165 VVHRDLKPGNLAVNEDC-ELKILDFGLARHADAEMTGYVV--TRWYRAPEVILSWMHYNQ 221
Query: 212 LVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY--SIQDLEAQRFI 266
VD++S G + EM T + + Q+ + + +PG + + D A+ +I
Sbjct: 222 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 278
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V + ++ E+ ++ L H +I+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN--------RELQIMRKLDHCNIVR 77
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGTLR---EYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + + R Y + + + + +K + Q+ + L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 196 GATDYTSSIDVWSAG-CVL 213
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRL-YSEVHLLSTLKHDSII 92
+ LG+G TVYKA D+ VA +++L + D + R E+ LL L H +II
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
++ + + + + + + + IK++ LQGL YLH
Sbjct: 76 GLLDAF--GHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW- 132
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSA--HSVIGTPEFMAPELY--EED 208
++HRDLK +N+ ++ + G +K+ D GLA A H V+ T + APEL
Sbjct: 133 -ILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGARM 189
Query: 209 YNELVDVYSFGMCVLEMFTCEYPY 232
Y VD+++ G C+L P+
Sbjct: 190 YGVGVDMWAVG-CILAELLLRVPF 212
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ V++A V EVA +V ++ ++ E+ ++ +KH +++
Sbjct: 46 KVIGNGSFGVVFQA-KLVESDEVAIKKVLQDKRFKN--------RELQIMRIVKHPNVVD 96
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGTLR---EYRKKYRRVDIRAIKSWARQILQGLVY 146
FY++ D+ N + E R Y K + + + IK + Q+L+ L Y
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ G +K+ D G A IL + S I + + APEL
Sbjct: 157 IHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIF 214
Query: 206 -EEDYNELVDVYSFGMCVLEMF 226
+Y +D++S G + E+
Sbjct: 215 GATNYTTNIDIWSTGCVMAELM 236
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 122/266 (45%), Gaps = 14/266 (5%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F+E LG GA V A ++ G A + L ++ +E+ +L +KH++I
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIE---NEIAVLRKIKHENI 82
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
+ + + + ++ + G L + + + + RQ+L + YLH
Sbjct: 83 VALEDIYESPNH--LYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 152 PPVIHRDLKCDNI--FVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEED 208
++HRDLK +N+ + ++ I D GL+ + + GTP ++APE L ++
Sbjct: 141 --IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG--KLPGAFYSIQDLEAQRFI 266
Y++ VD +S G+ + + C YP N +++++++ + ++ A+ FI
Sbjct: 199 YSKAVDCWSIGV-IAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFI 257
Query: 267 GRCL-VNASKRLSAKELLLDPFLASD 291
+ + +KR + ++ P++A D
Sbjct: 258 RNLMEKDPNKRYTCEQAARHPWIAGD 283
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST--LKHDSI 91
E +GKG V++ +W + + S D + + E L +T L+H++I
Sbjct: 14 ECVGKGRYGEVWRG---------SWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI 64
Query: 92 IRFYTSWIDVDQKTFNF--ITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH- 148
+ F S + + IT G+L +Y + +D + I GL +LH
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 149 -----SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV-----IGTPE 198
P + HRDLK NI V + GQ I DLGLA + S + V +GT
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 199 FMAPELYEE-------DYNELVDVYSFGMCVLEM 225
+MAPE+ +E D + VD+++FG+ + E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST--LKHDSI 91
E +GKG V++ +W + + S D + + E L +T L+H++I
Sbjct: 43 ECVGKGRYGEVWRG---------SWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI 93
Query: 92 IRFYTSWIDVDQKTFNF--ITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH- 148
+ F S + + IT G+L +Y + +D + I GL +LH
Sbjct: 94 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 149 -----SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV-----IGTPE 198
P + HRDLK NI V + GQ I DLGLA + S + V +GT
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 211
Query: 199 FMAPELYEE-------DYNELVDVYSFGMCVLEM 225
+MAPE+ +E D + VD+++FG+ + E+
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 14/241 (5%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KHDSI 91
+ ++GKG+ V KA D V E W +++ + L + EV LL + KHD+
Sbjct: 59 DSLIGKGSFGQVVKAYDRV---EQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTE 113
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREY----RKKYRRVDIRAIKSWARQILQGLVYL 147
+++Y + N + +F + Y +R V + + +A+Q+ L++L
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 148 HSRDPPVIHRDLKCDNIFV-NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LY 205
+ + +IH DLK +NI + N +KI D G + L + + I + + +PE L
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLL 231
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRF 265
Y+ +D++S G ++EM T E +S Q+ K V +P A Q +A++F
Sbjct: 232 GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKF 291
Query: 266 I 266
Sbjct: 292 F 292
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 26/191 (13%)
Query: 64 NELMRSPDDLQRLYSEVHLL-STLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYR 122
NE + + + Y EV+++ +++DSI++F + +D+ FI
Sbjct: 102 NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP------------ 149
Query: 123 KKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA 182
I+ IK + +L Y+H+ + + HRD+K NI ++ + G+VK+ D G +
Sbjct: 150 -------IQVIKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILMDKN-GRVKLSDFGESE 200
Query: 183 ILRGSKSAHSVIGTPEFMAPELY--EEDYN-ELVDVYSFGMCVLEMFTCEYPYSECANPA 239
+ K S GT EFM PE + E YN VD++S G+C+ MF P+S +
Sbjct: 201 YMVDKKIKGSR-GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV 259
Query: 240 QIYKKVTSGKL 250
+++ + + +
Sbjct: 260 ELFNNIRTKNI 270
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 134/320 (41%), Gaps = 40/320 (12%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F +VLG GA V A D+ VA + L ++ +E+ +L +KH +I
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME---NEIAVLHKIKHPNI 78
Query: 92 IRF---YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
+ Y S I ++ + G L + + R Q+L + YLH
Sbjct: 79 VALDDIYES-----GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 149 SRDPPVIHRDLKCDNIFVNG--HLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LY 205
D ++HRDLK +N+ ++ I D GL+ + + GTP ++APE L
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG--KLPGAFYSIQDLEAQ 263
++ Y++ VD +S G+ + + C YP N A++++++ + ++ A+
Sbjct: 192 QKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 264 RFIGRCL-VNASKRLSAKELLLDPFLASDEV--------------KLLSKTKLNQKPFLN 308
FI + + KR + ++ L P++A D K +K+K Q N
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQA--FN 308
Query: 309 ET----ELEKLQLSDDPPRT 324
T + KLQL P T
Sbjct: 309 ATAVVRHMRKLQLGHQPGGT 328
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST--LKHDSI 91
E +GKG V++ +W + + S D + + E L +T L+H++I
Sbjct: 14 ECVGKGRYGEVWRG---------SWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI 64
Query: 92 IRFYTSWIDVDQKTFNF--ITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH- 148
+ F S + + IT G+L +Y + +D + I GL +LH
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 149 -----SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV-----IGTPE 198
P + HRDLK NI V + GQ I DLGLA + S + V +GT
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 199 FMAPELYEE-------DYNELVDVYSFGMCVLEM 225
+MAPE+ +E D + VD+++FG+ + E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 59 NQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTL 118
+V + L +Q E +L+ TL+HD ++R Y + ++ ITE G+L
Sbjct: 38 TKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA--VVTREEPIYIITEYMAKGSL 95
Query: 119 REYRK--KYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIG 176
++ K + +V + + ++ QI +G+ Y+ ++ IHRDL+ N+ V+ L KI
Sbjct: 96 LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESL-MCKIA 152
Query: 177 DLGLAAILRGSK-SAHSVIGTP-EFMAPELYEED-YNELVDVYSFGMCVLEMFT 227
D GLA ++ ++ +A P ++ APE + DV+SFG+ + E+ T
Sbjct: 153 DFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 85
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGT---LREYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 146 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 203
Query: 206 -EEDYNELVDVYSFGMCVLEMF 226
DY +DV+S G + E+
Sbjct: 204 GATDYTSSIDVWSAGCVLAELL 225
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 96
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGT---LREYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 157 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 214
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 215 GATDYTSSIDVWSAG-CVL 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 89
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGT---LREYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 150 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 207
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 208 GATDYTSSIDVWSAG-CVL 225
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 89
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGT---LREYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 150 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 207
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 208 GATDYTSSIDVWSAG-CVL 225
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 77
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGTLR---EYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 196 GATDYTSSIDVWSAG-CVL 213
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 111
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGT---LREYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 172 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 229
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 230 GATDYTSSIDVWSAG-CVL 247
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 78
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGTLR---EYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 139 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 196
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 197 GATDYTSSIDVWSAG-CVL 214
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 77
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGTLR---EYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 196 GATDYTSSIDVWSAG-CVL 213
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E + G+G TV ++ G+ VA +V ++ P R + L+ L H +I+
Sbjct: 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKV-----IQDPRFRNRELQIMQDLAVLHHPNIV 82
Query: 93 RFYTSWIDVDQKT-----FNFITEMFTSGTLREYRKKYRRVDIRA---IKSWARQILQGL 144
+ + + + ++ N + E R R YRR IK + Q+++ +
Sbjct: 83 QLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI 142
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL 204
LH V HRD+K N+ VN G +K+ D G A L S+ + I + + APEL
Sbjct: 143 GCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPEL 202
Query: 205 Y--EEDYNELVDVYSFGMCVLEMFTCE 229
+ Y VD++S G EM E
Sbjct: 203 IFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 90
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGT---LREYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 151 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 208
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 209 GATDYTSSIDVWSAG-CVL 226
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 105
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGT---LREYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 166 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 223
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 224 GATDYTSSIDVWSAG-CVL 241
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 77
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGTLR---EYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 196 GATDYTSSIDVWSAG-CVL 213
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 81
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGTLR---EYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 142 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 199
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 200 GATDYTSSIDVWSAG-CVL 217
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 111
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGT---LREYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 172 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 229
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 230 GATDYTSSIDVWSAG-CVL 247
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V + ++ E+ ++ L H +I+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN--------RELQIMRKLDHCNIVR 77
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGTLR---EYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 196 GATDYTSSIDVWSAG-CVL 213
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 113
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGT---LREYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 174 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 231
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 232 GATDYTSSIDVWSAG-CVL 249
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 20/269 (7%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F +VLG GA V A D+ VA + L ++ +E+ +L +KH +I
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME---NEIAVLHKIKHPNI 78
Query: 92 IRF---YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
+ Y S I ++ + G L + + R Q+L + YLH
Sbjct: 79 VALDDIYES-----GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 149 SRDPPVIHRDLKCDNIFVNG--HLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LY 205
D ++HRDLK +N+ ++ I D GL+ + + GTP ++APE L
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG--KLPGAFYSIQDLEAQ 263
++ Y++ VD +S G+ + + C YP N A++++++ + ++ A+
Sbjct: 192 QKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 264 RFIGRCL-VNASKRLSAKELLLDPFLASD 291
FI + + KR + ++ L P++A D
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VLG+ VA +L+ ++ +R Y E+ LL + H +II
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + + +D + Q+L G+ +LHS
Sbjct: 88 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG- 144
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA + + T + APE + Y E
Sbjct: 145 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKE 202
Query: 212 LVDVYSFGMCVL 223
VD++S G C++
Sbjct: 203 NVDIWSVG-CIM 213
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V + ++ E+ ++ L H +I+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN--------RELQIMRKLDHCNIVR 77
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGTLR---EYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 196 GATDYTSSIDVWSAG-CVL 213
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 73 LQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRK--KYRRVDI 130
++ +E +++ TL+HD +++ + V ++ ITE G+L ++ K + + +
Sbjct: 221 VEAFLAEANVMKTLQHDKLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 277
Query: 131 RAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSA 190
+ ++ QI +G+ ++ R+ IHRDL+ NI V+ L KI D GLA + G+K
Sbjct: 278 PKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARV--GAKFP 332
Query: 191 HSVIGTPEFMAPELYE-EDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQI 241
++ APE + DV+SFG+ ++E+ T PY +NP I
Sbjct: 333 I------KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 115
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGT---LREYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 176 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 233
Query: 206 -EEDYNELVDVYSFGMCVLEMF 226
DY +DV+S G + E+
Sbjct: 234 GATDYTSSIDVWSAGCVLAELL 255
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 136/296 (45%), Gaps = 46/296 (15%)
Query: 29 YGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQ-RLYSEVHLLSTLK 87
Y L E+VLG+GA V I+ + E A V++ E + P ++ R++ EV +L +
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYA---VKIIE--KQPGHIRSRVFREVEMLYQCQ 68
Query: 88 -HDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
H +++ + + D+ F + E G++ + K R + + + L +
Sbjct: 69 GHRNVLELIEFFEEEDR--FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDF 126
Query: 147 LHSRDPPVIHRDLKCDNIFVN--GHLGQVKIG--DLGLAAILRGSKSAHSV------IGT 196
LH++ + HRDLK +NI + VKI DLG L G S S G+
Sbjct: 127 LHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 197 PEFMAPELYE------EDYNELVDVYSFGMCVLEMFTCEYP------YSEC------ANP 238
E+MAPE+ E Y++ D++S G+ +L + YP S+C A P
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGV-ILYILLSGYPPFVGRCGSDCGWDRGEACP 243
Query: 239 A---QIYKKVTSGK--LPGAFYSIQDLEAQRFIGRCLV-NASKRLSAKELLLDPFL 288
A +++ + GK P ++ A+ I + LV +A +RLSA ++L P++
Sbjct: 244 ACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 82
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGT---LREYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 143 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 200
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 201 GATDYTSSIDVWSAG-CVL 218
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 32/277 (11%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR-SPDDLQRL----YSEVHLLSTLK 87
+E+LG+G V + I + E A + + S +++Q L EV +L +
Sbjct: 9 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 68
Query: 88 -HDSIIRFYTSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLV 145
H +II+ ++ + TF F+ ++ G L +Y + + + + R +L+ +
Sbjct: 69 GHPNIIQLKDTY---ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 146 YLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY 205
LH + ++HRDLK +NI ++ + +K+ D G + L + V GTP ++APE+
Sbjct: 126 ALHKLN--IVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 182
Query: 206 E-------EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAF---- 254
E Y + VD++S G+ + + P+ + + + SG
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMIMSGNYQFGSPEWD 241
Query: 255 -YS--IQDLEAQRFIGRCLVNASKRLSAKELLLDPFL 288
YS ++DL RF+ +V KR +A+E L PF
Sbjct: 242 DYSDTVKDL-VSRFL---VVQPQKRYTAEEALAHPFF 274
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 32/277 (11%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR-SPDDLQRL----YSEVHLLSTLK 87
+E+LG+G V + I + E A + + S +++Q L EV +L +
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 81
Query: 88 -HDSIIRFYTSWIDVDQKTFNFIT-EMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLV 145
H +II+ ++ + TF F+ ++ G L +Y + + + + R +L+ +
Sbjct: 82 GHPNIIQLKDTY---ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 146 YLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY 205
LH + ++HRDLK +NI ++ + +K+ D G + L + V GTP ++APE+
Sbjct: 139 ALHKLN--IVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 195
Query: 206 E-------EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAF---- 254
E Y + VD++S G+ + + P+ + + + SG
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMIMSGNYQFGSPEWD 254
Query: 255 -YS--IQDLEAQRFIGRCLVNASKRLSAKELLLDPFL 288
YS ++DL RF+ +V KR +A+E L PF
Sbjct: 255 DYSDTVKDL-VSRFL---VVQPQKRYTAEEALAHPFF 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 59 NQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTL 118
+V + L +Q E +L+ TL+HD ++R Y + ++ ITE G+L
Sbjct: 37 TKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA--VVTKEEPIYIITEFMAKGSL 94
Query: 119 REYRK--KYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIG 176
++ K + +V + + ++ QI +G+ Y+ ++ IHRDL+ N+ V+ L KI
Sbjct: 95 LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESL-MCKIA 151
Query: 177 DLGLAAILRGSK-SAHSVIGTP-EFMAPELYEED-YNELVDVYSFGMCVLEMFT 227
D GLA ++ ++ +A P ++ APE + +V+SFG+ + E+ T
Sbjct: 152 DFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 20/269 (7%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F +VLG GA V A D+ VA + L ++ +E+ +L +KH +I
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME---NEIAVLHKIKHPNI 78
Query: 92 IRF---YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
+ Y S I ++ + G L + + R Q+L + YLH
Sbjct: 79 VALDDIYES-----GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 149 SRDPPVIHRDLKCDNIFVNG--HLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LY 205
D ++HRDLK +N+ ++ I D GL+ + + GTP ++APE L
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG--KLPGAFYSIQDLEAQ 263
++ Y++ VD +S G+ + + C YP N A++++++ + ++ A+
Sbjct: 192 QKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 264 RFIGRCL-VNASKRLSAKELLLDPFLASD 291
FI + + KR + ++ L P++A D
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 156
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGT---LREYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D+ N + + R Y + + + + +K + Q+ + L Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 217 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 274
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 275 GATDYTSSIDVWSAG-CVL 292
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 34/214 (15%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LG G V+ A+D VA ++ L + P ++ E+ ++ L HD+I++ +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVF 74
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYR-----KKYRRVDIRAI-----------KSWARQ 139
++ + + +T+ G+L E ++Y D+ + + + Q
Sbjct: 75 ----EILGPSGSQLTD--DVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQ 128
Query: 140 ILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL--RGSKSAHSVIG-- 195
+L+GL Y+HS + V+HRDLK N+F+N +KIGD GLA I+ S H G
Sbjct: 129 LLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 196 TPEFMAPELY--EEDYNELVDVYSFGMCVLEMFT 227
T + +P L +Y + +D+++ G EM T
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 32/224 (14%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
+ + ++G+G+ VY A D+ VA +V N + D +R+ E+ +L+ LK D
Sbjct: 29 IIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV--NRMFEDLIDCKRILREITILNRLKSDY 86
Query: 91 IIRFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
IIR Y I D F+ +I L++ K + IK+ +L G ++H
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV--------------- 193
+ +IHRDLK N +N VK+ D GLA + K + V
Sbjct: 147 --ESGIIHRDLKPANCLLNQDCS-VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 194 --------IGTPEFMAPE--LYEEDYNELVDVYSFGMCVLEMFT 227
+ T + APE L +E+Y + +D++S G E+
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+LG+G VYK G VA RL E +LQ +EV ++S H +++R
Sbjct: 37 ILGRGGFGKVYKG-RLADGXLVAVK--RLKEERTQGGELQ-FQTEVEMISMAVHRNLLRL 92
Query: 95 YTSWIDVDQK--TFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR-D 151
+ ++ + ++ + LRE + +D + A +GL YLH D
Sbjct: 93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD 152
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL--RGSKSAHSVIGTPEFMAPE-LYEED 208
P +IHRD+K NI ++ V +GD GLA ++ + +V G +APE L
Sbjct: 153 PKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGK 211
Query: 209 YNELVDVYSFGMCVLEMFTCEYPY 232
+E DV+ +G+ +LE+ T + +
Sbjct: 212 SSEKTDVFGYGVMLLELITGQRAF 235
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 20/269 (7%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F +VLG GA V A D+ VA + L ++ +E+ +L +KH +I
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME---NEIAVLHKIKHPNI 78
Query: 92 IRF---YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
+ Y S I ++ + G L + + R Q+L + YLH
Sbjct: 79 VALDDIYES-----GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 149 SRDPPVIHRDLKCDNIFVNG--HLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LY 205
D ++HRDLK +N+ ++ I D GL+ + + GTP ++APE L
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG--KLPGAFYSIQDLEAQ 263
++ Y++ VD +S G+ + + C YP N A++++++ + ++ A+
Sbjct: 192 QKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 264 RFIGRCL-VNASKRLSAKELLLDPFLASD 291
FI + + KR + ++ L P++A D
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 26/280 (9%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
L ++LG+GA V++ + G A +R P D+Q E +L L H +
Sbjct: 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQ--MREFEVLKKLNHKN 68
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTL----REYRKKYRRVDIRAIKSWARQILQGLVY 146
I++ + + + I E G+L E Y + + R ++ G+ +
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL-RDVVGGMNH 127
Query: 147 LHSRDPPVIHRDLKCDNIF-VNGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPE 203
L R+ ++HR++K NI V G GQ K+ D G A L + S+ GT E++ P+
Sbjct: 128 L--RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185
Query: 204 LYE---------EDYNELVDVYSFGMCVLEMFTCEYPYSECANP---AQIYKKVTSGKLP 251
+YE + Y VD++S G+ T P+ P ++ K+ +GK
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245
Query: 252 GAFYSIQDLEAQRFIGRCLVNASKRLS-AKELLLDPFLAS 290
GA +Q E + S LS ++LL P LA+
Sbjct: 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLAN 285
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 46/225 (20%)
Query: 34 EVLGKGAMKTVYK-AIDEV-LGVEV---AWNQVRLNELMRSPDDLQRLYSEVHLLSTLKH 88
E++G+G VYK ++DE + V+V A Q +NE ++ + ++H
Sbjct: 19 ELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINE------------KNIYRVPLMEH 66
Query: 89 DSIIRFYTS--WIDVDQKT-FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLV 145
D+I RF + D + + + E + +G+L +Y + + + + A + +GL
Sbjct: 67 DNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCR-LAHSVTRGLA 125
Query: 146 YLHSR-------DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK---------S 189
YLH+ P + HRDL N+ V G I D GL+ L G++ +
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKND-GTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 190 AHSVIGTPEFMAPELYEEDYN--------ELVDVYSFGMCVLEMF 226
A S +GT +MAPE+ E N + VD+Y+ G+ E+F
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 30/211 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LG+G+ V++ D+ G + A +VRL E+ R+ E+ + L I+ Y
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRL-EVFRA--------EELMACAGLTSPRIVPLY 151
Query: 96 TS-----WIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ W+ N E+ G+L + K+ + + Q L+GL YLHSR
Sbjct: 152 GAVREGPWV-------NIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 204
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI------GTPEFMAPEL 204
++H D+K DN+ ++ + D G A L+ S++ GT MAPE+
Sbjct: 205 R--ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEV 262
Query: 205 Y-EEDYNELVDVYSFGMCVLEMFTCEYPYSE 234
+ VDV+S +L M +P+++
Sbjct: 263 VLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQ 293
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 35/226 (15%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
+ ++G+G+ VY A D+ VA +V N + D +R+ E+ +L+ LK D I
Sbjct: 32 IKHLIGRGSYGYVYLAYDKNANKNVAIKKV--NRMFEDLIDCKRILREITILNRLKSDYI 89
Query: 92 IRFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
IR + I D F+ +I L++ K + + +K+ +L G ++H
Sbjct: 90 IRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH- 148
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV---------------- 193
+ +IHRDLK N +N VKI D GLA + K H V
Sbjct: 149 -ESGIIHRDLKPANCLLNQDCS-VKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 194 ----------IGTPEFMAPE--LYEEDYNELVDVYSFGMCVLEMFT 227
+ T + APE L +E+Y +D++S G E+
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G G+ VY+A G VA +V ++ ++ E+ ++ L H +I+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVR 77
Query: 94 ----FYTSWIDVDQKTFNFITEMFTSGTLR---EYRKKYRRVDIRAIKSWARQILQGLVY 146
FY+S D N + + R Y + + + + +K + Q+ + L Y
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY- 205
+HS + HRD+K N+ ++ +K+ D G A L + S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 206 -EEDYNELVDVYSFGMCVL 223
DY +DV+S G CVL
Sbjct: 196 GATDYTSSIDVWSAG-CVL 213
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 118/280 (42%), Gaps = 26/280 (9%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDS 90
L ++LG+GA V++ + G A +R P D+Q E +L L H +
Sbjct: 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQ--MREFEVLKKLNHKN 68
Query: 91 IIRFYTSWIDVDQKTFNFITEMFTSGTL----REYRKKYRRVDIRAIKSWARQILQGLVY 146
I++ + + + I E G+L E Y + + R ++ G+ +
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV-LRDVVGGMNH 127
Query: 147 LHSRDPPVIHRDLKCDNIF-VNGHLGQ--VKIGDLGLAAILRGSKSAHSVIGTPEFMAPE 203
L R+ ++HR++K NI V G GQ K+ D G A L + + GT E++ P+
Sbjct: 128 L--RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPD 185
Query: 204 LYE---------EDYNELVDVYSFGMCVLEMFTCEYPYSECANP---AQIYKKVTSGKLP 251
+YE + Y VD++S G+ T P+ P ++ K+ +GK
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245
Query: 252 GAFYSIQDLEAQRFIGRCLVNASKRLS-AKELLLDPFLAS 290
GA +Q E + S LS ++LL P LA+
Sbjct: 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLAN 285
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRL-NELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA + G A ++RL E P R E+ +L LKH +I+
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIV 63
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ Y + +K + E + ++ KS+ Q+L G+ Y H R
Sbjct: 64 KLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR- 120
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI--LRGSKSAHSVIGTPEFMAPELY--EED 208
V+HRDLK N+ +N G++KI D GLA + K H V+ T + AP++ +
Sbjct: 121 -VLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 209 YNELVDVYSFGMCVLEM 225
Y+ +D++S G EM
Sbjct: 178 YSTTIDIWSVGCIFAEM 194
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDD--LQRL-YSEVHLLSTLKHDSII 92
+G+G+ V+K + G VA + + + S DD ++++ E+ +L LKH +++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVA-----IKKFLESEDDPVIKKIALREIRMLKQLKHPNLV 65
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ ++ + + E L E + R V +KS Q LQ + + H +
Sbjct: 66 NLLEVF--RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN- 122
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAH-SVIGTPEFMAPELYEED--Y 209
IHRD+K +NI + H +K+ D G A +L G + + T + +PEL D Y
Sbjct: 123 -CIHRDVKPENILITKH-SVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 210 NELVDVYSFGMCVLEMFT 227
VDV++ G E+ +
Sbjct: 181 GPPVDVWAIGCVFAELLS 198
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRL-NELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA + G A ++RL E P R E+ +L LKH +I+
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIV 63
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ Y + +K + E + ++ KS+ Q+L G+ Y H R
Sbjct: 64 KLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR- 120
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI--LRGSKSAHSVIGTPEFMAPELY--EED 208
V+HRDLK N+ +N G++KI D GLA + K H V+ T + AP++ +
Sbjct: 121 -VLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 209 YNELVDVYSFGMCVLEM 225
Y+ +D++S G EM
Sbjct: 178 YSTTIDIWSVGCIFAEM 194
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 78 SEVHLLSTLKHDSIIRFYTSWIDVDQK--TFNFITEMFTSGTLREYRKKYRRVDIRAIKS 135
+E++ ++H++I+ F + I IT+ +G+L +Y K +D +++
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLK 138
Query: 136 WARQILQGLVYLHSR------DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKS 189
A + GL +LH+ P + HRDLK NI V + G I DLGLA +
Sbjct: 139 LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVKFISDTN 197
Query: 190 A-----HSVIGTPEFMAPELYEEDYNE-------LVDVYSFGMCVLEM 225
++ +GT +M PE+ +E N + D+YSFG+ + E+
Sbjct: 198 EVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 22/267 (8%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYS-EVHLLSTLKHD 89
+ E LG+G V++ VE + + + + ++ Q L E+ +L+ +H
Sbjct: 8 MIAEDLGRGEFGIVHRC------VETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHR 61
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSG--TLREYRKKYRRVDIRAIKSWARQILQGLVYL 147
+I+ + S+ +++ F F SG ++ R I S+ Q+ + L +L
Sbjct: 62 NILHLHESFESMEELVMIF---EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL 118
Query: 148 HSRDPPVIHRDLKCDNI-FVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE 206
HS + + H D++ +NI + +KI + G A L+ + + PE+ APE+++
Sbjct: 119 HSHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 207 ED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLP---GAFYSIQDLEA 262
D + D++S G V + + P+ N QI + + + + AF I +EA
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEI-SIEA 234
Query: 263 QRFIGRCLVNASK-RLSAKELLLDPFL 288
F+ R LV K R++A E L P+L
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWL 261
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 24/268 (8%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E LG+GA VY+ + G + + ++++ D + + +E+ +L L H +II
Sbjct: 58 ESELGRGATSIVYRCKQK--GTQKPYAL----KVLKKTVDKKIVRTEIGVLLRLSHPNII 111
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ I + + E+ T G L + + R +QIL+ + YLH
Sbjct: 112 KLKE--IFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG- 168
Query: 153 PVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE-DY 209
++HRDLK +N+ +KI D GL+ I+ +V GTP + APE+ Y
Sbjct: 169 -IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAY 227
Query: 210 NELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQ------DLEAQ 263
VD++S G+ + P+ + +++++ L +Y I L A+
Sbjct: 228 GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRI----LNCEYYFISPWWDEVSLNAK 283
Query: 264 RFIGRCLV-NASKRLSAKELLLDPFLAS 290
+ + +V + KRL+ + L P++
Sbjct: 284 DLVRKLIVLDPKKRLTTFQALQHPWVTG 311
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRL-NELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA + G A ++RL E P R E+ +L LKH +I+
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIV 63
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ Y + +K + E + ++ KS+ Q+L G+ Y H R
Sbjct: 64 KLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR- 120
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI--LRGSKSAHSVIGTPEFMAPELY--EED 208
V+HRDLK N+ +N G++KI D GLA + K H ++ T + AP++ +
Sbjct: 121 -VLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKK 177
Query: 209 YNELVDVYSFGMCVLEM 225
Y+ +D++S G EM
Sbjct: 178 YSTTIDIWSVGCIFAEM 194
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G+ E V++ + + +DL L SE+ ++ + KH
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 101 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S Q+ +G+ YL S+ IHRDL N+ V + +KI D GLA + K
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKK 215
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 216 TTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 30/211 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LG+G+ V++ D+ G + A +VRL E+ R+ E+ + L I+ Y
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRL-EVFRA--------EELMACAGLTSPRIVPLY 132
Query: 96 TS-----WIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ W+ N E+ G+L + K+ + + Q L+GL YLHSR
Sbjct: 133 GAVREGPWV-------NIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 185
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI------GTPEFMAPEL 204
++H D+K DN+ ++ + D G A L+ ++ GT MAPE+
Sbjct: 186 R--ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEV 243
Query: 205 Y-EEDYNELVDVYSFGMCVLEMFTCEYPYSE 234
+ VDV+S +L M +P+++
Sbjct: 244 VLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQ 274
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGVE------VAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G++ V V++ + + DL L SE+ ++ + KH
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 94 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA----ILRGSK 188
+ S A Q+ +G+ YL S+ IHRDL N+ V +KI D GLA I K
Sbjct: 152 LVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDXXKK 208
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 209 TTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 39/274 (14%)
Query: 36 LGKGAM----KTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
LG+G+ K V+K ++ V++ ++ N Q+ + + L H +I
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT--------QKEITALKLCEG--HPNI 68
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
++ + + D TF + E+ G L E KK + R+++ + ++H D
Sbjct: 69 VKLHEVFHD-QLHTF-LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMH--D 124
Query: 152 PPVIHRDLKCDNIFV---NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFM----APEL 204
V+HRDLK +N+ N +L ++KI D G A R + + TP F APEL
Sbjct: 125 VGVVHRDLKPENLLFTDENDNL-EIKIIDFGFA---RLKPPDNQPLKTPCFTLHYAAPEL 180
Query: 205 YEED-YNELVDVYSFGMCVLEMFTCEYPYSE------CANPAQIYKKVTSG--KLPGAFY 255
++ Y+E D++S G+ + M + + P+ C + +I KK+ G G +
Sbjct: 181 LNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAW 240
Query: 256 SIQDLEAQRFI-GRCLVNASKRLSAKELLLDPFL 288
EA+ I G V+ +KRL L + +L
Sbjct: 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G+ E V++ + + DL L SE+ ++ + KH
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 101 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S Q+ +G+ YL S+ IHRDL N+ V + +KI D GLA + K
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDXXKK 215
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 216 TTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VLG+ VA +L+ ++ +R Y E+ LL + H +II
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + + +D + Q+L G+ +LHS
Sbjct: 90 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA + + T + APE + Y
Sbjct: 147 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAA 204
Query: 212 LVDVYSFGMCVL 223
VD++S G C++
Sbjct: 205 NVDIWSVG-CIM 215
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 120/277 (43%), Gaps = 26/277 (9%)
Query: 26 NGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST 85
N Y L + LG+G V + I + G E A L + R D + E+ +L
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAK--FLKKRRRGQDCRAEILHEIAVLEL 84
Query: 86 LKH-DSIIRFYTSWIDVDQKTFNFITEMFTSG-----TLREYRKKYRRVD-IRAIKSWAR 138
K +I + + + + I E G L E + D IR IK
Sbjct: 85 AKSCPRVINLHEVYENTSEIIL--ILEYAAGGEIFSLCLPELAEMVSENDVIRLIK---- 138
Query: 139 QILQGLVYLHSRDPPVIHRDLKCDNIFVNG--HLGQVKIGDLGLAAILRGSKSAHSVIGT 196
QIL+G+ YLH + ++H DLK NI ++ LG +KI D G++ + + ++GT
Sbjct: 139 QILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGT 196
Query: 197 PEFMAPELYEED-YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL---PG 252
PE++APE+ D D+++ G+ + T P+ N + Y ++ +
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN-QETYLNISQVNVDYSEE 255
Query: 253 AFYSIQDLEAQRFIGRCLV-NASKRLSAKELLLDPFL 288
F S+ L A FI LV N KR +A+ L +L
Sbjct: 256 TFSSVSQL-ATDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G+ E V++ + + DL L SE+ ++ + KH
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 101 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S Q+ +G+ YL S+ IHRDL N+ V + +KI D GLA + K
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDXXKK 215
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 216 TTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G+ E V++ + + DL L SE+ ++ + KH
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 101 KNIIHLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S Q+ +G+ YL S+ IHRDL N+ V + +KI D GLA + K
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKK 215
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 216 TTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
+ +LG+GA V A + G VA ++ E P R E+ +L KH++I
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKI---EPFDKPLFALRTLREIKILKHFKHENI 71
Query: 92 IRFYTSWIDVDQKTFN---FITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
I + + FN I E+ + R + D I+ + Q L+ + LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD--HIQYFIYQTLRAVKVLH 129
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-----------VIGTP 197
+ VIHRDLK N+ +N + +K+ D GLA I+ S + +S + T
Sbjct: 130 GSN--VIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATR 186
Query: 198 EFMAPE--LYEEDYNELVDVYSFGMCVLEMF 226
+ APE L Y+ +DV+S G + E+F
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
+ +LG+GA V A + G VA ++ E P R E+ +L KH++I
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKI---EPFDKPLFALRTLREIKILKHFKHENI 71
Query: 92 IRFYTSWIDVDQKTFN---FITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
I + + FN I E+ + R + D I+ + Q L+ + LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD--HIQYFIYQTLRAVKVLH 129
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-----------VIGTP 197
+ VIHRDLK N+ +N + +K+ D GLA I+ S + +S + T
Sbjct: 130 GSN--VIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR 186
Query: 198 EFMAPE--LYEEDYNELVDVYSFGMCVLEMF 226
+ APE L Y+ +DV+S G + E+F
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G+ E V++ + + DL L SE+ ++ + KH
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 101 KNIITLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S Q+ +G+ YL S+ IHRDL N+ V + +KI D GLA + K
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKK 215
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 216 TTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
+ +LG+GA V A + G VA ++ E P R E+ +L KH++I
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKI---EPFDKPLFALRTLREIKILKHFKHENI 71
Query: 92 IRFYTSWIDVDQKTFN---FITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
I + + FN I E+ + R + D I+ + Q L+ + LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD--HIQYFIYQTLRAVKVLH 129
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-----------VIGTP 197
+ VIHRDLK N+ +N + +K+ D GLA I+ S + +S + T
Sbjct: 130 GSN--VIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATR 186
Query: 198 EFMAPE--LYEEDYNELVDVYSFGMCVLEMF 226
+ APE L Y+ +DV+S G + E+F
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 72 DLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIR 131
D R E +L+ + H +++ + ++ + K + I + G L K
Sbjct: 73 DRVRTKMERDILADVNHPFVVKLHYAF-QTEGKLY-LILDFLRGGDLFTRLSKEVMFTEE 130
Query: 132 AIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSA 190
+K + ++ GL +LHS +I+RDLK +NI ++ G +K+ D GL+ + K A
Sbjct: 131 DVKFYLAELALGLDHLHSLG--IIYRDLKPENILLDEE-GHIKLTDFGLSKEAIDHEKKA 187
Query: 191 HSVIGTPEFMAPELY-EEDYNELVDVYSFGMCVLEMFTCEYPY 232
+S GT E+MAPE+ + ++ D +S+G+ + EM T P+
Sbjct: 188 YSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA D G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 27 EKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIR---EISLLKELHHPNIV 82
Query: 93 RFYTSWIDV--DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
S IDV ++ + E + + + IK + Q+L+G+ + H
Sbjct: 83 ----SLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPELY--EE 207
++HRDLK N+ +N G +K+ D GLA A +S + T + AP++ +
Sbjct: 139 R--ILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 196 KYSTSVDIWSIGCIFAEMIT 215
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 12/218 (5%)
Query: 19 GYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVA--WNQVRLNELMRSPDDLQRL 76
G+ + DP+ ++ L + VLG+G+ V+ + ++ G + + L + D R
Sbjct: 17 GHEKADPS-QFELLK-VLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRT 73
Query: 77 YSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSW 136
E +L + H I++ + ++ + K + I + G L K +K +
Sbjct: 74 KMERDILVEVNHPFIVKLHYAF-QTEGKLY-LILDFLRGGDLFTRLSKEVMFTEEDVKFY 131
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIG 195
++ L +LHS +I+RDLK +NI ++ G +K+ D GL+ + K A+S G
Sbjct: 132 LAELALALDHLHSLG--IIYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKKAYSFCG 188
Query: 196 TPEFMAPELY-EEDYNELVDVYSFGMCVLEMFTCEYPY 232
T E+MAPE+ + + D +SFG+ + EM T P+
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGVE------VAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G++ V V++ + + DL L SE+ ++ + KH
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 79 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S A Q+ +G+ YL S+ IHRDL N+ V +KI D GLA + K
Sbjct: 137 LVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKK 193
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 194 TTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 34/219 (15%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G+ E V++ + + DL L SE+ ++ + KH
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 101 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG---SKS 189
+ S Q+ +G+ YL S+ IHRDL N+ V + +KI D GLA + K+
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKN 215
Query: 190 AHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLN-ELMRSPDDLQRLYSEVHLLSTLKHDSII 92
E +G+G VYKA D G VA ++RL+ E P R E+ LL L H +I+
Sbjct: 27 EKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIR---EISLLKELHHPNIV 82
Query: 93 RFYTSWIDV--DQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
S IDV ++ + E + + + IK + Q+L+G+ + H
Sbjct: 83 ----SLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSVIGTPEFMAPELY--EE 207
++HRDLK N+ +N G +K+ D GLA A +S + T + AP++ +
Sbjct: 139 R--ILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y+ VD++S G EM T
Sbjct: 196 KYSTSVDIWSIGCIFAEMIT 215
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGVE------VAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G++ V V++ + + DL L SE+ ++ + KH
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 83 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S A Q+ +G+ YL S+ IHRDL N+ V +KI D GLA + K
Sbjct: 141 LVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKK 197
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 198 TTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGVE------VAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G++ V V++ + + DL L SE+ ++ + KH
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 87 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S A Q+ +G+ YL S+ IHRDL N+ V +KI D GLA + K
Sbjct: 145 LVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKK 201
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 202 TTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGVE------VAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G++ V V++ + + DL L SE+ ++ + KH
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 86 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S A Q+ +G+ YL S+ IHRDL N+ V +KI D GLA + K
Sbjct: 144 LVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKK 200
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 201 TTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGVE------VAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G++ V V++ + + DL L SE+ ++ + KH
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 94 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S A Q+ +G+ YL S+ IHRDL N+ V +KI D GLA + K
Sbjct: 152 LVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKK 208
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 209 TTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGVE------VAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G++ V V++ + + DL L SE+ ++ + KH
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 94 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S A Q+ +G+ YL S+ IHRDL N+ V +KI D GLA + K
Sbjct: 152 LVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKK 208
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 209 TTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 79 EVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRK--KYRRVDIRAIKSW 136
E ++ LKHD +++ Y V ++ +TE G+L ++ K + R + + +
Sbjct: 54 EAQIMKKLKHDKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM 110
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIG 195
A Q+ G+ Y+ + IHRDL+ NI V L KI D GLA ++ ++ +A
Sbjct: 111 AAQVAAGMAYIERMN--YIHRDLRSANILVGNGL-ICKIADFGLARLIEDNEXTARQGAK 167
Query: 196 TP-EFMAPE--LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSG 248
P ++ APE LY + DV+SFG+ + E+ T PY N ++ ++V G
Sbjct: 168 FPIKWTAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPGMNN-REVLEQVERG 222
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 32/201 (15%)
Query: 72 DLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREY---------- 121
D QR E LL+ L+H+ I++FY D D F E G L ++
Sbjct: 63 DFQR---EAELLTNLQHEHIVKFYGVCGDGDPLIMVF--EYMKHGDLNKFLRAHGPDAMI 117
Query: 122 ------RKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKI 175
R+ + + + A QI G+VYL S+ +HRDL N V +L VKI
Sbjct: 118 LVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGANL-LVKI 174
Query: 176 GDLGLAAILRGSK----SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT-CE 229
GD G++ + + H+++ +M PE + + DV+SFG+ + E+FT +
Sbjct: 175 GDFGMSRDVYSTDYYRVGGHTMLPI-RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 233
Query: 230 YPYSECANPAQIYKKVTSGKL 250
P+ + +N ++ + +T G++
Sbjct: 234 QPWFQLSN-TEVIECITQGRV 253
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGVE------VAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G++ V V++ + + DL L SE+ ++ + KH
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 135 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S A Q+ +G+ YL S+ IHRDL N+ V +KI D GLA + K
Sbjct: 193 LVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKK 249
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 250 TTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G+ E V++ + + DL L SE+ ++ + KH
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 101 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S Q+ +G+ YL S+ IHRDL N+ V + ++I D GLA + K
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMRIADFGLARDINNIDYYKK 215
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 216 TTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 45/277 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLK-HDSIIR 93
VL +G VY+A D G E A ++ NE ++ +Q EV + L H +I++
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQ----EVCFMKKLSGHPNIVQ 90
Query: 94 FYTSWI------DVDQKTFNFITEMFTSGTLREYRKKYRR---VDIRAIKSWARQILQGL 144
F ++ D Q F +TE+ G L E+ KK + + Q + +
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTEL-CKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG------SKSAHSVI---- 194
++H + PP+IHRDLK +N+ ++ G +K+ D G A + S +++
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLSNQ-GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 195 ---GTPEFMAPELYEEDYN----ELVDVYSFGMCVLEMFTC-EYPYSECANPAQIYKKVT 246
TP + PE+ + N E D+++ G C+L + ++P+ + A ++
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG-CILYLLCFRQHPFEDGAK-----LRIV 262
Query: 247 SGKLPGAFYSIQDLEAQRFIGRCLVNASKRLSAKELL 283
+GK YSI + Q + L+ A +++ +E L
Sbjct: 263 NGK-----YSIPPHDTQYTVFHSLIRAMLQVNPEERL 294
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 12/218 (5%)
Query: 19 GYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVA--WNQVRLNELMRSPDDLQRL 76
G+ + DP+ ++ L + VLG+G+ V+ + ++ G + + L + D R
Sbjct: 18 GHEKADPS-QFELLK-VLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRT 74
Query: 77 YSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSW 136
E +L + H I++ + ++ + K + I + G L K +K +
Sbjct: 75 KMERDILVEVNHPFIVKLHYAF-QTEGKLY-LILDFLRGGDLFTRLSKEVMFTEEDVKFY 132
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIG 195
++ L +LHS +I+RDLK +NI ++ G +K+ D GL+ + K A+S G
Sbjct: 133 LAELALALDHLHSLG--IIYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKKAYSFCG 189
Query: 196 TPEFMAPELY-EEDYNELVDVYSFGMCVLEMFTCEYPY 232
T E+MAPE+ + + D +SFG+ + EM T P+
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 12/218 (5%)
Query: 19 GYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVA--WNQVRLNELMRSPDDLQRL 76
G+ + DP+ ++ L + VLG+G+ V+ + ++ G + + L + D R
Sbjct: 17 GHEKADPS-QFELLK-VLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRT 73
Query: 77 YSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSW 136
E +L + H I++ + ++ + K + I + G L K +K +
Sbjct: 74 KMERDILVEVNHPFIVKLHYAF-QTEGKLY-LILDFLRGGDLFTRLSKEVMFTEEDVKFY 131
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIG 195
++ L +LHS +I+RDLK +NI ++ G +K+ D GL+ + K A+S G
Sbjct: 132 LAELALALDHLHSLG--IIYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKKAYSFCG 188
Query: 196 TPEFMAPELY-EEDYNELVDVYSFGMCVLEMFTCEYPY 232
T E+MAPE+ + + D +SFG+ + EM T P+
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+G V A E +G+ E V++ + + DL L SE+ ++ + KH
Sbjct: 89 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 147 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S Q+ +G+ YL S+ IHRDL N+ V + +KI D GLA + K
Sbjct: 205 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKK 261
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 262 TTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+G V A E +G+ E V++ + + DL L SE+ ++ + KH
Sbjct: 35 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 93 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S Q+ +G+ YL S+ IHRDL N+ V + +KI D GLA + K
Sbjct: 151 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKK 207
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 208 TTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D V V VA ++ E QR E+ +L +H++II
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY---CQRTLREIKILLAFRHENIIGIN 89
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 147 VLHRDLKPSNLLLNT-TSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 206 GYTKSIDIWSVGCILAEMLS 225
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 30/211 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
LG+G+ V++ D+ G + A +VRL E+ R E+ + L I+ Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFR--------VEELVACAGLSSPRIVPLY 130
Query: 96 TS-----WIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ W+ N E+ G+L + K+ + + Q L+GL YLH+R
Sbjct: 131 GAVREGPWV-------NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 183
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI------GTPEFMAPE- 203
++H D+K DN+ ++ + + D G A L+ S++ GT MAPE
Sbjct: 184 R--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 204 LYEEDYNELVDVYSFGMCVLEMFTCEYPYSE 234
+ + + VD++S +L M +P+++
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 272
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+G V A E +G+ E V++ + + DL L SE+ ++ + KH
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 90 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S Q+ +G+ YL S+ IHRDL N+ V + +KI D GLA + K
Sbjct: 148 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKK 204
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 205 TTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR-SPDDLQRLYSEVHLLSTLKHDSII 92
E++GKG VY EVA +RL ++ R + D L+ EV +H++++
Sbjct: 39 ELIGKGRFGQVYHG---RWHGEVA---IRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRV-DIRAIKSWARQILQGLVYLHSRD 151
F + + IT + TL + + V D+ + A++I++G+ YLH++
Sbjct: 93 LFMGACMSPPH--LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGL---AAILRGSKSAHSVI---GTPEFMAPELY 205
++H+DLK N+F + G+V I D GL + +L+ + + G +APE+
Sbjct: 151 --ILHKDLKSKNVFYDN--GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 206
Query: 206 -------EED---YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
EED +++ DV++ G E+ E+P+ A I++ T K
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMK 260
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 128 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 184
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 185 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 243 NVDIWSVGCIMGEM 256
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 90 NVF--TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEM 218
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 83 NVF--TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG- 139
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 140 -IIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 198 NVDIWSVGCIMGEM 211
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 128 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 184
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 185 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 243 NVDIWSVGCIMGEM 256
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+G V A E +G+ E V++ + + DL L SE+ ++ + KH
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + R ++ +
Sbjct: 88 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S Q+ +G+ YL S+ IHRDL N+ V + +KI D GLA + K
Sbjct: 146 LVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTEN-NVMKIADFGLARDINNIDYYKK 202
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 203 TTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 79 EVHLLSTLKHDSIIRFYTSWID-VDQKT---FNF----ITEMFTSGTLREYRKKYRRVDI 130
E+ LL LKH ++I ++ D+K F++ + + + KK ++
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 131 RAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNG---HLGQVKIGDLGLAAI---- 183
+KS QIL G+ YLH+ V+HRDLK NI V G G+VKI D+G A +
Sbjct: 128 GMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 184 LRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPYSEC 235
L+ V+ T + APEL Y + +D+++ G E+ T E P C
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHC 238
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 90 NVF--TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEM 218
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D V V VA ++ E QR E+ +L +H++II
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 107
Query: 95 -YTSWIDVDQ-KTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
++Q K +T + + + + ++ D I + QIL+GL Y+HS +
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 164
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYE 206
V+HRDLK N+ +N +KI D GLA + + T + APE L
Sbjct: 165 -VLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 207 EDYNELVDVYSFGMCVLEMFT 227
+ Y + +D++S G + EM +
Sbjct: 223 KGYTKSIDIWSVGCILAEMLS 243
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 45/294 (15%)
Query: 6 QLAGAADEAKAHIGYIETDPNGRYGL------FEEVLGKGAMKTVYKAIDEVLGVEVAWN 59
Q+ G++D ++ + E + + ++ F +VLG GA V A +
Sbjct: 17 QVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSI 76
Query: 60 QVRLNELMRSPDDLQR--LYSEVHLLSTL-KHDSIIRFYTSWIDVDQKTFNFITEMFTSG 116
QV + L D +R L SE+ +++ L H++I+ + I E G
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC--TLSGPIYLIFEYCCYG 134
Query: 117 TLREY----RKKYRRVDIRA-------------------IKSWARQILQGLVYLHSRDPP 153
L Y R+K+ +I + +A Q+ +G+ +L +
Sbjct: 135 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-- 192
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP----EFMAPE-LYEED 208
+HRDL N+ V H VKI D GLA + S S + V G ++MAPE L+E
Sbjct: 193 CVHRDLAARNVLVT-HGKVVKICDFGLARDIM-SDSNYVVRGNARLPVKWMAPESLFEGI 250
Query: 209 YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-KLPGAFYSIQDL 260
Y DV+S+G+ + E+F+ PY A YK + +G K+ FY+ +++
Sbjct: 251 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEI 304
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 84 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 140
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 141 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 199 NVDIWSVGCIMGEM 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 84 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 140
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 141 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 199 NVDIWSVGCIMGEM 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 90 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEM 218
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 65 ELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKK 124
+++ P+ + EV+ + +L H ++IR Y V +TE+ G+L + +K
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRK 113
Query: 125 YR-RVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI 183
++ + + +A Q+ +G+ YL S+ IHRDL N+ + VKIGD GL
Sbjct: 114 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATR-DLVKIGDFGLMRA 170
Query: 184 LRGSKSAHSVIGTPE-----FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECAN 237
L H V+ + APE L ++ D + FG+ + EMFT N
Sbjct: 171 L-PQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 229
Query: 238 PAQIYKKV 245
+QI K+
Sbjct: 230 GSQILHKI 237
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 83 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 139
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 140 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 198 NVDIWSVGCIMGEM 211
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 91 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 147
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 148 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 206 NVDIWSVGCIMGEM 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 89 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 145
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 146 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 203
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 204 NVDIWSVGCIMGEM 217
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 59/298 (19%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST- 85
R + +E +GKG V++ W + + S + + + E + T
Sbjct: 41 ARTIVLQESIGKGRFGEVWRG---------KWRGEEVAVKIFSSREERSWFREAEIYQTV 91
Query: 86 -LKHDSIIRFYTSWIDVDQKTFN---FITEMFTSGTLREYRKKYRRVDIRAIKSWARQIL 141
L+H++I+ F + + D T+ +++ G+L +Y +Y V + + A
Sbjct: 92 MLRHENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTA 149
Query: 142 QGLVYLHSR------DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV-- 193
GL +LH P + HRDLK NI V + G I DLGLA +R + ++
Sbjct: 150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDI 206
Query: 194 -----IGTPEFMAPELYEEDYN-------ELVDVYSFGMCVLEMF-TC---------EYP 231
+GT +MAPE+ ++ N + D+Y+ G+ E+ C + P
Sbjct: 207 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266
Query: 232 YSEC--ANPA--QIYKKVTSGKL-PGAFYSIQDLEAQRFIGRCL-----VNASKRLSA 279
Y + ++P+ ++ K V KL P Q EA R + + + N + RL+A
Sbjct: 267 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA 324
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G+ E V++ + + DL L SE+ ++ + KH
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I + G LREY + R ++ +
Sbjct: 101 KNIINLLGAC--TQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S Q+ +G+ YL S+ IHRDL N+ V + +KI D GLA + K
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKK 215
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 216 TTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 91 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 147
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 148 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 206 NVDIWSVGCIMGEM 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 90 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEM 218
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D V V VA ++ E QR E+ +L +H++II
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY---CQRTLREIKILLAFRHENIIGIN 89
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 147 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 206 GYTKSIDIWSVGCILAEMLS 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 65 ELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKK 124
+++ P+ + EV+ + +L H ++IR Y V +TE+ G+L + +K
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRK 103
Query: 125 YR-RVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI 183
++ + + +A Q+ +G+ YL S+ IHRDL N+ + VKIGD GL
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATR-DLVKIGDFGLMRA 160
Query: 184 LRGSKSAHSVIGTPE-----FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECAN 237
L H V+ + APE L ++ D + FG+ + EMFT N
Sbjct: 161 L-PQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 219
Query: 238 PAQIYKKV 245
+QI K+
Sbjct: 220 GSQILHKI 227
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 27/235 (11%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQR-LYSEVHLLSTLKHDSIIRF 94
LG+GA V+ A L E V + L + D+ ++ + E LL+ L+H+ I++F
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 95 YTSWIDVDQKTFNFITEMFTSGTLREYRKKY-------------RRVDIRAIKSWARQIL 141
Y ++ D F E G L ++ + + + + A+QI
Sbjct: 81 YGVCVEGDPLIMVF--EYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 142 QGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK----SAHSVIGTP 197
G+VYL S+ +HRDL N V +L VKIGD G++ + + H+++
Sbjct: 139 AGMVYLASQH--FVHRDLATRNCLVGENL-LVKIGDFGMSRDVYSTDYYRVGGHTMLPI- 194
Query: 198 EFMAPE-LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSGKL 250
+M PE + + DV+S G+ + E+FT + P+ + +N ++ + +T G++
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-NEVIECITQGRV 248
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 45/217 (20%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+ +G+GA V A D V VA ++ E QR E+ +L +H+++I
Sbjct: 49 QYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTY---CQRTLREIQILLRFRHENVIG 105
Query: 94 FYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDI------RAIKS----------WA 137
I ++ + TL R Y D+ + +KS +
Sbjct: 106 ---------------IRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL 150
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS----- 192
QIL+GL Y+HS + V+HRDLK N+ +N +KI D GLA I + H+
Sbjct: 151 YQILRGLKYIHSAN--VLHRDLKPSNLLINTTC-DLKICDFGLARI-ADPEHDHTGFLTE 206
Query: 193 VIGTPEFMAPE--LYEEDYNELVDVYSFGMCVLEMFT 227
+ T + APE L + Y + +D++S G + EM +
Sbjct: 207 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST- 85
R + +E +GKG V++ W + + S + + + E + T
Sbjct: 8 ARTIVLQESIGKGRFGEVWRG---------KWRGEEVAVKIFSSREERSWFREAEIYQTV 58
Query: 86 -LKHDSIIRFYTSWIDVDQKTFN---FITEMFTSGTLREYRKKYRRVDIRAIKSWARQIL 141
L+H++I+ F + + D T+ +++ G+L +Y +Y V + + A
Sbjct: 59 MLRHENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTA 116
Query: 142 QGLVYLHSR------DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV-- 193
GL +LH P + HRDLK NI V + G I DLGLA +R + ++
Sbjct: 117 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDI 173
Query: 194 -----IGTPEFMAPELYEEDYN-------ELVDVYSFGMCVLEM 225
+GT +MAPE+ ++ N + D+Y+ G+ E+
Sbjct: 174 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D V V VA ++ E QR E+ +L +H++II
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 95
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 152
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 153 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 211
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 212 GYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D V V VA ++ E QR E+ +L +H++II
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 87
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 145 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 204 GYTKSIDIWSVGCILAEMLS 223
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST- 85
R + +E +GKG V++ W + + S + + + E + T
Sbjct: 2 ARTIVLQESIGKGRFGEVWRG---------KWRGEEVAVKIFSSREERSWFREAEIYQTV 52
Query: 86 -LKHDSIIRFYTSWIDVDQKTFN---FITEMFTSGTLREYRKKYRRVDIRAIKSWARQIL 141
L+H++I+ F + + D T+ +++ G+L +Y +Y V + + A
Sbjct: 53 MLRHENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTA 110
Query: 142 QGLVYLHSR------DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV-- 193
GL +LH P + HRDLK NI V + G I DLGLA +R + ++
Sbjct: 111 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDI 167
Query: 194 -----IGTPEFMAPELYEEDYN-------ELVDVYSFGMCVLEM 225
+GT +MAPE+ ++ N + D+Y+ G+ E+
Sbjct: 168 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D V V VA ++ E QR E+ +L +H++II
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 87
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 145 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 204 GYTKSIDIWSVGCILAEMLS 223
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGV------EVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G+ E V++ + + DL L SE+ ++ + KH
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I + G LREY + R ++ +
Sbjct: 101 KNIINLLGAC--TQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S Q+ +G+ YL S+ IHRDL N+ V + +KI D GLA + K
Sbjct: 159 LVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKK 215
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 216 TTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 93/224 (41%), Gaps = 35/224 (15%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR--SPDDLQRLYSEVHLLSTLKHDSI 91
+ LG+G V KA L + V + L SP +L+ L SE ++L + H +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRV-------------------DIRA 132
I+ Y + I E G+LR + ++ R+V D RA
Sbjct: 89 IKLYGAC--SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 133 IK-----SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL--- 184
+ S+A QI QG+ YL ++HRDL NI V ++KI D GL+ +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNILV-AEGRKMKISDFGLSRDVYEE 203
Query: 185 -RGSKSAHSVIGTPEFMAPELYEEDYNELVDVYSFGMCVLEMFT 227
K + I L++ Y DV+SFG+ + E+ T
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST- 85
R + +E +GKG V++ W + + S + + + E + T
Sbjct: 3 ARTIVLQESIGKGRFGEVWRG---------KWRGEEVAVKIFSSREERSWFREAEIYQTV 53
Query: 86 -LKHDSIIRFYTSWIDVDQKTFN---FITEMFTSGTLREYRKKYRRVDIRAIKSWARQIL 141
L+H++I+ F + + D T+ +++ G+L +Y +Y V + + A
Sbjct: 54 MLRHENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTA 111
Query: 142 QGLVYLHSR------DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV-- 193
GL +LH P + HRDLK NI V + G I DLGLA +R + ++
Sbjct: 112 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDI 168
Query: 194 -----IGTPEFMAPELYEEDYN-------ELVDVYSFGMCVLEM 225
+GT +MAPE+ ++ N + D+Y+ G+ E+
Sbjct: 169 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST- 85
R + +E +GKG V++ W + + S + + + E + T
Sbjct: 28 ARTIVLQESIGKGRFGEVWRG---------KWRGEEVAVKIFSSREERSWFREAEIYQTV 78
Query: 86 -LKHDSIIRFYTSWIDVDQKTFN---FITEMFTSGTLREYRKKYRRVDIRAIKSWARQIL 141
L+H++I+ F + + D T+ +++ G+L +Y +Y V + + A
Sbjct: 79 MLRHENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTA 136
Query: 142 QGLVYLHSR------DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV-- 193
GL +LH P + HRDLK NI V + G I DLGLA +R + ++
Sbjct: 137 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDI 193
Query: 194 -----IGTPEFMAPELYEEDYN-------ELVDVYSFGMCVLEM 225
+GT +MAPE+ ++ N + D+Y+ G+ E+
Sbjct: 194 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII--- 92
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ +I L + + +D + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLVGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEMF 226
VD++S G+ + EM
Sbjct: 205 NVDIWSVGVIMGEMI 219
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR--SPDDLQRLYSEVHLLSTLKHDSI 91
+ LG+G V KA L + V + L SP +L+ L SE ++L + H +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRV-------------------DIRA 132
I+ Y + I E G+LR + ++ R+V D RA
Sbjct: 89 IKLYGAC--SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 133 IK-----SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL--- 184
+ S+A QI QG+ YL + ++HRDL NI V ++KI D GL+ +
Sbjct: 147 LTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEE 203
Query: 185 -RGSKSAHSVIGTPEFMAPELYEEDYNELVDVYSFGMCVLEMFT 227
K + I L++ Y DV+SFG+ + E+ T
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 30/211 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G+ V++ D+ G + A +VRL E+ R E+ + L I+ Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFR--------VEELVACAGLSSPRIVPLY 132
Query: 96 TS-----WIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ W+ N E+ G+L + K+ + + Q L+GL YLH+R
Sbjct: 133 GAVREGPWV-------NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 185
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI------GTPEFMAPE- 203
++H D+K DN+ ++ + + D G A L+ S++ GT MAPE
Sbjct: 186 R--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 204 LYEEDYNELVDVYSFGMCVLEMFTCEYPYSE 234
+ + + VD++S +L M +P+++
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 274
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D V V VA ++ E QR E+ +L +H++II
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 107
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 165 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 224 GYTKSIDIWSVGCILAEMLS 243
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D V V VA ++ E QR E+ +L +H++II
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 89
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 147 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 206 GYTKSIDIWSVGCILAEMLS 225
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 27 GRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST- 85
R + +E +GKG V++ W + + S + + + E + T
Sbjct: 5 ARTIVLQESIGKGRFGEVWRG---------KWRGEEVAVKIFSSREERSWFREAEIYQTV 55
Query: 86 -LKHDSIIRFYTSWIDVDQKTFN---FITEMFTSGTLREYRKKYRRVDIRAIKSWARQIL 141
L+H++I+ F + + D T+ +++ G+L +Y +Y V + + A
Sbjct: 56 MLRHENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTA 113
Query: 142 QGLVYLHSR------DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV-- 193
GL +LH P + HRDLK NI V + G I DLGLA +R + ++
Sbjct: 114 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLA--VRHDSATDTIDI 170
Query: 194 -----IGTPEFMAPELYEEDYN-------ELVDVYSFGMCVLEM 225
+GT +MAPE+ ++ N + D+Y+ G+ E+
Sbjct: 171 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 65 ELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKK 124
+++ P+ + EV+ + +L H ++IR Y V +TE+ G+L + +K
Sbjct: 51 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRK 107
Query: 125 YR-RVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI 183
++ + + +A Q+ +G+ YL S+ IHRDL N+ + VKIGD GL
Sbjct: 108 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATR-DLVKIGDFGLMRA 164
Query: 184 LRGSKSAHSVIGTPE-----FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECAN 237
L H V+ + APE L ++ D + FG+ + EMFT N
Sbjct: 165 L-PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 223
Query: 238 PAQIYKKV 245
+QI K+
Sbjct: 224 GSQILHKI 231
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D V V VA ++ E QR E+ +L +H++II
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 87
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 204 GYTKSIDIWSVGCILAEMLS 223
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 65 ELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKK 124
+++ P+ + EV+ + +L H ++IR Y V +TE+ G+L + +K
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRK 113
Query: 125 YR-RVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI 183
++ + + +A Q+ +G+ YL S+ IHRDL N+ + VKIGD GL
Sbjct: 114 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATR-DLVKIGDFGLMRA 170
Query: 184 LRGSKSAHSVIGTPE-----FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECAN 237
L H V+ + APE L ++ D + FG+ + EMFT N
Sbjct: 171 L-PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 229
Query: 238 PAQIYKKV 245
+QI K+
Sbjct: 230 GSQILHKI 237
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRL-NELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+G+G V+KA G +VA +V + NE P R E+ +L LKH++++
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQLLKHENVVNL 81
Query: 95 ----------YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGL 144
Y F+F E +G L K+ + IK + +L GL
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDF-CEHDLAGLLSNVLVKF---TLSEIKRVMQMLLNGL 137
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAH-----SVIGTPEF 199
Y+H ++HRD+K N+ + G +K+ D GLA +K++ + + T +
Sbjct: 138 YYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 200 MAPELY--EEDYNELVDVYSFGMCVLEMFT 227
PEL E DY +D++ G + EM+T
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 30/211 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G+ V++ D+ G + A +VRL E+ R E+ + L I+ Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFR--------VEELVACAGLSSPRIVPLY 116
Query: 96 TS-----WIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSR 150
+ W+ N E+ G+L + K+ + + Q L+GL YLH+R
Sbjct: 117 GAVREGPWV-------NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI------GTPEFMAPE- 203
++H D+K DN+ ++ + + D G A L+ S++ GT MAPE
Sbjct: 170 R--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 204 LYEEDYNELVDVYSFGMCVLEMFTCEYPYSE 234
+ + + VD++S +L M +P+++
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 65 ELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKK 124
+++ P+ + EV+ + +L H ++IR Y V +TE+ G+L + +K
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRK 103
Query: 125 YR-RVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI 183
++ + + +A Q+ +G+ YL S+ IHRDL N+ + VKIGD GL
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATR-DLVKIGDFGLMRA 160
Query: 184 LRGSKSAHSVIGTPE-----FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECAN 237
L H V+ + APE L ++ D + FG+ + EMFT N
Sbjct: 161 L-PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 219
Query: 238 PAQIYKKV 245
+QI K+
Sbjct: 220 GSQILHKI 227
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 12 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 65
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ +TE + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 66 VQLYAV---VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYV 120
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 121 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 177
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
LY + DV+SFG+ + E+ T
Sbjct: 178 LYGR-FTIKSDVWSFGILLTELTT 200
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D V V VA ++ E QR E+ +L +H++II
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 87
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 204 GYTKSIDIWSVGCILAEMLS 223
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRL-NELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+G+G V+KA G +VA +V + NE P R E+ +L LKH++++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQLLKHENVVNL 82
Query: 95 ----------YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGL 144
Y F+F E +G L K+ + IK + +L GL
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDF-CEHDLAGLLSNVLVKF---TLSEIKRVMQMLLNGL 138
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAH-----SVIGTPEF 199
Y+H ++HRD+K N+ + G +K+ D GLA +K++ + + T +
Sbjct: 139 YYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 200 MAPELY--EEDYNELVDVYSFGMCVLEMFT 227
PEL E DY +D++ G + EM+T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRL-NELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+G+G V+KA G +VA +V + NE P R E+ +L LKH++++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQLLKHENVVNL 82
Query: 95 ----------YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGL 144
Y F+F E +G L K+ + IK + +L GL
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDF-CEHDLAGLLSNVLVKF---TLSEIKRVMQMLLNGL 138
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAH-----SVIGTPEF 199
Y+H ++HRD+K N+ + G +K+ D GLA +K++ + + T +
Sbjct: 139 YYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 200 MAPELY--EEDYNELVDVYSFGMCVLEMFT 227
PEL E DY +D++ G + EM+T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 90 NVF--TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEM 218
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRL-NELMRSPDDLQRLYSEVHLLSTLKHDSIIRF 94
+G+G V+KA G +VA +V + NE P R E+ +L LKH++++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQLLKHENVVNL 82
Query: 95 ----------YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGL 144
Y F+F E +G L K+ + IK + +L GL
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDF-CEHDLAGLLSNVLVKF---TLSEIKRVMQMLLNGL 138
Query: 145 VYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAH-----SVIGTPEF 199
Y+H ++HRD+K N+ + G +K+ D GLA +K++ + + T +
Sbjct: 139 YYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 200 MAPELY--EEDYNELVDVYSFGMCVLEMFT 227
PEL E DY +D++ G + EM+T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII--- 92
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ +I L + + +D + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLVGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEMF 226
VD++S G+ + EM
Sbjct: 205 NVDIWSVGVIMGEMI 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 65 ELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKK 124
+++ P+ + EV+ + +L H ++IR Y V +TE+ G+L + +K
Sbjct: 51 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRK 107
Query: 125 YR-RVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI 183
++ + + +A Q+ +G+ YL S+ IHRDL N+ + VKIGD GL
Sbjct: 108 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATR-DLVKIGDFGLMRA 164
Query: 184 LRGSKSAHSVIGTPE-----FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECAN 237
L H V+ + APE L ++ D + FG+ + EMFT N
Sbjct: 165 L-PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 223
Query: 238 PAQIYKKV 245
+QI K+
Sbjct: 224 GSQILHKI 231
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D V V VA ++ E QR E+ +L +H++II
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 87
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 204 GYTKSIDIWSVGCILAEMLS 223
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 36/220 (16%)
Query: 36 LGKGAMKTVYKAIDEVLGVE------VAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KH 88
LG+GA V A E +G++ V V++ + + DL L SE+ ++ + KH
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR----------------RVDIRA 132
+II + I E + G LREY + ++ +
Sbjct: 94 KNIINLLGAC--TQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRG----SK 188
+ S A Q+ +G+ YL S+ IHRDL N+ V +KI D GLA + K
Sbjct: 152 LVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKK 208
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + + ++MAPE L++ Y DV+SFG+ + E+FT
Sbjct: 209 TTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 65 ELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKK 124
+++ P+ + EV+ + +L H ++IR Y V +TE+ G+L + +K
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRK 103
Query: 125 YR-RVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI 183
++ + + +A Q+ +G+ YL S+ IHRDL N+ + VKIGD GL
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATR-DLVKIGDFGLMRA 160
Query: 184 LRGSKSAHSVIGTPE-----FMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECAN 237
L H V+ + APE L ++ D + FG+ + EMFT N
Sbjct: 161 L-PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 219
Query: 238 PAQIYKKV 245
+QI K+
Sbjct: 220 GSQILHKI 227
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QK+ +++ L + + +D + Q+L G+ +LHS
Sbjct: 90 NVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEMFTC 228
VD++S G C++ C
Sbjct: 205 NVDIWSVG-CIMGEMVC 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLST--LKHDSI 91
E +GKG V++ + W+ + + S D Q + E + +T L+HD+I
Sbjct: 14 ECVGKGRYGEVWRGL---------WHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNI 64
Query: 92 IRFYTSWIDVDQKTFN----FITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYL 147
+ F S D+ + + IT G+L ++ ++ A++ A GL +L
Sbjct: 65 LGFIAS--DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRL-AVSAACGLAHL 121
Query: 148 HSR------DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAI-LRGSK----SAHSVIGT 196
H P + HRD K N+ V +L Q I DLGLA + +GS + +GT
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNL-QCCIADLGLAVMHSQGSDYLDIGNNPRVGT 180
Query: 197 PEFMAPELYEEDYN-------ELVDVYSFGMCVLEM 225
+MAPE+ +E + D+++FG+ + E+
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR--SPDDLQRLYSEVHLLSTLKHDSI 91
+ LG+G V KA L + V + L SP +L+ L SE ++L + H +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRV-------------------DIRA 132
I+ Y + I E G+LR + ++ R+V D RA
Sbjct: 89 IKLYGAC--SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 133 IK-----SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS 187
+ S+A QI QG+ YL + ++HRDL NI V ++KI D GL+ +
Sbjct: 147 LTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEE 203
Query: 188 ----KSAHSVIGTPEFMAPELYEEDYNELVDVYSFGMCVLEMFT 227
K + I L++ Y DV+SFG+ + E+ T
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 271 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 324
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ +TE + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 325 VQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYV 379
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 380 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 436
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECAN 237
LY + DV+SFG+ + E+ T PY N
Sbjct: 437 LYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVN 470
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 46/231 (19%)
Query: 25 PNGRYGLFEEVLGKGAMKTVYKA--IDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHL 82
P G L E + +G V+KA +++ + V++ Q D Q SE +
Sbjct: 13 PRGSLQLLE-IKARGRFGCVWKAQLMNDFVAVKIFPLQ-----------DKQSWQSEREI 60
Query: 83 LST--LKHDSIIRFYTSWIDVDQKTFNF------ITEMFTSGTLREYRKKYRRVDIRAIK 134
ST +KH+++++F I +++ N IT G+L +Y K + +
Sbjct: 61 FSTPGMKHENLLQF----IAAEKRGSNLEVELWLITAFHDKGSLTDYLKG-NIITWNELC 115
Query: 135 SWARQILQGLVYLH---------SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR 185
A + +GL YLH P + HRD K N+ + L V + D GLA
Sbjct: 116 HVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFE 174
Query: 186 GSK---SAHSVIGTPEFMAPEL------YEEDYNELVDVYSFGMCVLEMFT 227
K H +GT +MAPE+ ++ D +D+Y+ G+ + E+ +
Sbjct: 175 PGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG G TV+K + E + + V +++ E Q + + + +L H
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVC---IKVIEDKSGRQSFQAVTDHMLAIGSLDHA 93
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
I+R + +T+ G+L ++ +++R + + + +W QI +G+ YL
Sbjct: 94 HIVRLLGL---CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 150
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL--RGSKSAHSVIGTP-EFMAPE-L 204
++HR+L N+ + QV++ D G+A +L + +S TP ++MA E +
Sbjct: 151 EHG--MVHRNLAARNVLLKSP-SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 205 YEEDYNELVDVYSFGMCVLEMFT 227
+ Y DV+S+G+ V E+ T
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 13 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 66
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ +TE + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 67 VQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV 121
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 122 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 178
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
LY + DV+SFG+ + E+ T
Sbjct: 179 LYGR-FTIKSDVWSFGILLTELTT 201
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 107/248 (43%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S L H +I+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKLNHQNIV 97
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 98 R----CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R S + + +
Sbjct: 154 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 270
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 271 CPGPVYRI 278
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 20/231 (8%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGV-EVAWNQVRLNELMRSPDDLQR--LYSEVHLLSTLKH 88
E+V+G G V +V G E+ V + L D QR SE ++ H
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREIC---VAIKTLKAGYTDKQRRDFLSEASIMGQFDH 89
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREY-RKKYRRVDIRAIKSWARQILQGLVYL 147
+II + + K ITE +G+L + RK R + + R I G+ YL
Sbjct: 90 PNII--HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 147
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS-KSAHSVIGTP---EFMAPE 203
D +HRDL NI VN +L K+ D G++ +L ++A++ G + APE
Sbjct: 148 S--DMSAVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 204
Query: 204 -LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSG-KLP 251
+ + DV+S+G+ + E+ + E PY + +N + K + G +LP
Sbjct: 205 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAIEEGYRLP 254
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D VL VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREY---RKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QKT +++ L + + +D + Q+L G+ +LHS
Sbjct: 90 NVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEM 225
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEM 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII--- 92
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ +I L + + +D + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLVGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEMF 226
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEMI 219
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-----ED 208
+IHRD+K NI ++ G +K+ D G++ L S + G +MAPE + +
Sbjct: 147 IIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 209 YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQ----R 264
Y+ DV+S G+ + E+ T +PY + + +V G P + ++ E
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGD-PPQLSNSEEREFSPSFIN 264
Query: 265 FIGRCLV-NASKRLSAKELLLDPFL 288
F+ CL + SKR KELL PF+
Sbjct: 265 FVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 11 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 64
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ +TE + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 65 VQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV 119
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 120 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 176
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
LY + DV+SFG+ + E+ T
Sbjct: 177 LYGR-FTIKSDVWSFGILLTELTT 199
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 107/248 (43%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S L H +I+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKLNHQNIV 111
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 112 R----CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R S + + +
Sbjct: 168 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 284
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 285 CPGPVYRI 292
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII--- 92
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ +I L + + +D + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEMF 226
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEMI 219
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 22 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ +TE + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 76 VQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV 130
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECAN 237
LY + DV+SFG+ + E+ T PY N
Sbjct: 188 LYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D + V VA ++ E QR E+ +L +H++II
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 91
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL----RGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + + T + APE L +
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D + V VA ++ E QR E+ +L +H++II
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 92
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL----RGSKSAHSVIGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + + T + APE L +
Sbjct: 150 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 209 GYTKSIDIWSVGCILAEMLS 228
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 78 SEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKY-RRVDIRAIKSW 136
E ++ H +IIR + K +TE +G+L + +K+ + + +
Sbjct: 95 GEASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS-KSAHSVIG 195
R I G+ YL D +HRDL NI +N +L K+ D GL+ +L ++A++ G
Sbjct: 153 LRGIASGMKYLS--DMGAVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 196 TP---EFMAPE-LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSG-K 249
+ +PE + + DV+S+G+ + E+ + E PY E +N + K V G +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 268
Query: 250 LP 251
LP
Sbjct: 269 LP 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 15 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 68
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ +TE + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 69 VQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYV 123
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 124 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 180
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
LY + DV+SFG+ + E+ T
Sbjct: 181 LYGR-FTIKSDVWSFGILLTELTT 203
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D + V VA ++ E QR E+ +L +H++II
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 85
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 143 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 202 GYTKSIDIWSVGCILAEMLS 221
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D + V VA ++ E QR E+ +L +H++II
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 92
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 150 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 208
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 209 GYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D + V VA ++ E QR E+ +L +H++II
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 93
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 150
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 151 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 209
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 210 GYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D + V VA ++ E QR E+ +L +H++II
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 84
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 141
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 142 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 200
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 201 GYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D + V VA ++ E QR E+ +L +H++II
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 91
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII--- 92
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ +I L + + +D + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEMF 226
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEMI 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QK+ +++ L + + +D + Q+L G+ +LHS
Sbjct: 95 NVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 151
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 152 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 209
Query: 212 LVDVYSFGMCVLEMFTC 228
VD++S G C++ C
Sbjct: 210 NVDLWSVG-CIMGEMVC 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D + V VA ++ E QR E+ +L +H++II
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 85
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 143 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 202 GYTKSIDIWSVGCILAEMLS 221
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D + V VA ++ E QR E+ +L +H++II
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 91
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QK+ +++ L + + +D + Q+L G+ +LHS
Sbjct: 84 NVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 140
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 141 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 212 LVDVYSFGMCVLEMFTC 228
VD++S G C++ C
Sbjct: 199 NVDLWSVG-CIMGEMVC 214
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D + V VA ++ E QR E+ +L +H++II
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 91
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 149 VLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 136 WARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIG 195
+A +I GL LH +++RDLK +NI ++ H G ++I DLGLA + ++ +G
Sbjct: 291 YAAEICCGLEDLHRER--IVYRDLKPENILLDDH-GHIRISDLGLAVHVPEGQTIKGRVG 347
Query: 196 TPEFMAPELYE-EDYNELVDVYSFGMCVLEMFTCEYPYSE 234
T +MAPE+ + E Y D ++ G + EM + P+ +
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 34 EVLGKGAMKTVYKAI----DEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+VLG G TV+K + E + + V +++ E Q + + + +L H
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVC---IKVIEDKSGRQSFQAVTDHMLAIGSLDHA 75
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYR-RVDIRAIKSWARQILQGLVYLH 148
I+R + +T+ G+L ++ +++R + + + +W QI +G+ YL
Sbjct: 76 HIVRLLGL---CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 132
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL--RGSKSAHSVIGTP-EFMAPE-L 204
++HR+L N+ + QV++ D G+A +L + +S TP ++MA E +
Sbjct: 133 EHG--MVHRNLAARNVLLKSP-SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 205 YEEDYNELVDVYSFGMCVLEMFT 227
+ Y DV+S+G+ V E+ T
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QK+ +++ L + + +D + Q+L G+ +LHS
Sbjct: 90 NVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEMFTC 228
VD++S G C++ C
Sbjct: 205 NVDLWSVG-CIMGEMVC 220
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 45/229 (19%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDL---QRLYSEVHLLSTLKHDSI 91
++G G+ V +A D++ VA + +++R +DL +R+ E+ +L+ L HD +
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVA-----IKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 92 IRFYTSWIDVDQKTFN---FITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
++ I D + F+ + E+ S + +R ++ IK+ +L G+ Y+H
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELH-IKTLLYNLLVGVKYVH 173
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV--------------- 193
S ++HRDLK N VN VK+ D GLA + ++ +S
Sbjct: 174 SAG--ILHRDLKPANCLVNQDCS-VKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF 230
Query: 194 -------------IGTPEFMAPE--LYEEDYNELVDVYSFGMCVLEMFT 227
+ T + APE L +E+Y E +DV+S G E+
Sbjct: 231 PHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D + V VA ++ E QR E+ +L +H++II
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY---XQRTLREIKILLRFRHENIIGIN 91
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 149 VLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRF- 94
+G+GA V A D + V VA ++ E QR E+ +L +H++II
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY---CQRTLREIKILLRFRHENIIGIN 91
Query: 95 -YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPP 153
++Q +I + L + K + + I + QIL+GL Y+HS +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLK-CQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 154 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----IGTPEFMAPE--LYEE 207
V+HRDLK N+ +N +KI D GLA + + T + APE L +
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 208 DYNELVDVYSFGMCVLEMFT 227
Y + +D++S G + EM +
Sbjct: 208 GYTKSIDIWSVGCILAEMLS 227
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSII--- 92
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+T +++ +I L + + +D + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEMF 226
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEMI 219
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 136 WARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIG 195
+A +I GL LH +++RDLK +NI ++ H G ++I DLGLA + ++ +G
Sbjct: 291 YAAEICCGLEDLHRER--IVYRDLKPENILLDDH-GHIRISDLGLAVHVPEGQTIKGRVG 347
Query: 196 TPEFMAPELYE-EDYNELVDVYSFGMCVLEMFTCEYPYSE 234
T +MAPE+ + E Y D ++ G + EM + P+ +
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QK+ +++ L + + +D + Q+L G+ +LHS
Sbjct: 91 NVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 147
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 148 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 212 LVDVYSFGMCVLEMF 226
VD++S G + EM
Sbjct: 206 NVDIWSVGCIMGEMI 220
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 120/275 (43%), Gaps = 28/275 (10%)
Query: 34 EVLGKGAMKTV----YKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD 89
+V+G+GA V +KA +V +++ + + RS D + E +++
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMKLL---SKFEMIKRS--DSAFFWEERDIMAFANSP 135
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
+++ + ++ D K + E G L Y V + K + +++ L +HS
Sbjct: 136 WVVQLFCAF--QDDKYLYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHS 192
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAH--SVIGTPEFMAPELYEE 207
+IHRD+K DN+ ++ H G +K+ D G + + H + +GTP++++PE+ +
Sbjct: 193 MG--LIHRDVKPDNMLLDKH-GHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 208 D-----YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLE- 261
Y D +S G+ + EM + P+ + Y K+ K F ++
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTPFY-ADSLVGTYSKIMDHKNSLCFPEDAEISK 308
Query: 262 -AQRFIGRCLVNASKRL---SAKELLLDPFLASDE 292
A+ I L + RL +E+ PF +D+
Sbjct: 309 HAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQ 343
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QK+ +++ L + + +D + Q+L G+ +LHS
Sbjct: 90 NVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEMF 226
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEMI 219
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 188 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ +TE + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 242 VQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYV 296
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 297 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
LY + DV+SFG+ + E+ T
Sbjct: 354 LYGR-FTIKSDVWSFGILLTELTT 376
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 20/130 (15%)
Query: 139 QILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV----- 193
QI + + +LHS+ ++HRDLK NIF VK+GD GL + + +V
Sbjct: 172 QIAEAVEFLHSKG--LMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 194 --------IGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKK 244
+GT +M+PE ++ +Y+ VD++S G+ + E+ Y +S +I
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---YSFSTQMERVRIITD 285
Query: 245 VTSGKLPGAF 254
V + K P F
Sbjct: 286 VRNLKFPLLF 295
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRL--NELMRSPDDLQRLYSEVHLLSTLKHDSI 91
+ +G+G V++A ++V A ++RL EL R +++ EV L+ L+H I
Sbjct: 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR-----EKVMREVKALAKLEHPGI 66
Query: 92 IRFYTSWIDV 101
+R++ +W++
Sbjct: 67 VRYFNAWLET 76
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 188 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ +TE + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 242 VQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYV 296
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 297 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
LY + DV+SFG+ + E+ T
Sbjct: 354 LYGR-FTIKSDVWSFGILLTELTT 376
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 22 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ +TE + G L ++ K KY R+ + A QI G+ Y+
Sbjct: 76 VQLYAV---VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV 130
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
LY + DV+SFG+ + E+ T
Sbjct: 188 LYGR-FTIKSDVWSFGILLTELTT 210
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QK+ +++ L + + +D + Q+L G+ +LHS
Sbjct: 92 NVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 148
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 149 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKE 206
Query: 212 LVDVYSFGMCVLEMF 226
VD++S G + EM
Sbjct: 207 NVDIWSVGCIMGEMI 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLRE---YRKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QK+ +++ L + + +D + Q+L G+ +LHS
Sbjct: 90 NVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEMF 226
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEMI 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G GA V A D +L VA +L+ ++ +R Y E+ L+ + H +II
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREY---RKKYRRVDIRAIKSWARQILQGLVYLHSRDP 152
+ QK+ +++ L + + +D + Q+L G+ +LHS
Sbjct: 90 NVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 153 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEEDYNE 211
+IHRDLK NI V +KI D GLA S + T + APE + Y E
Sbjct: 147 -IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 212 LVDVYSFGMCVLEMF 226
VD++S G + EM
Sbjct: 205 NVDIWSVGCIMGEMI 219
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 22/265 (8%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR-SP-DDLQRLYSEVHLLSTLK----H 88
+LGKG TV+ ++VA + N ++ SP D EV LL + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
+IR W + + + + L +Y + + + + Q++ + + H
Sbjct: 98 PGVIRLL-DWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH 156
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LYEE 207
SR V+HRD+K +NI ++ G K+ D G A+L + GT + PE +
Sbjct: 157 SRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLH-DEPYTDFDGTRVYSPPEWISRH 213
Query: 208 DYNEL-VDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFI 266
Y+ L V+S G+ + +M + P+ +++ +L + D A I
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPFER-------DQEILEAELHFPAHVSPDCCA--LI 264
Query: 267 GRCLV-NASKRLSAKELLLDPFLAS 290
RCL S R S +E+LLDP++ +
Sbjct: 265 RRCLAPKPSSRPSLEEILLDPWMQT 289
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S H +I+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 97
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 98 R----CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R S + + +
Sbjct: 154 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 270
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 271 CPGPVYRI 278
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S H +I+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 96
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 97 R----CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R S + + +
Sbjct: 153 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 269
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 270 CPGPVYRI 277
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+G+GA V + G QV ++M D L+R EV + D ++
Sbjct: 67 KVIGRGAFSEVAVVKMKQTG------QVYAMKIMNKWDMLKR--GEVSCFRE-ERDVLVN 117
Query: 94 FYTSWIDV------DQKTFNFITEMFTSGTLREYRKKY-RRVDIRAIKSWARQILQGLVY 146
WI D+ + E + G L K+ R+ + + +I+ +
Sbjct: 118 GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDS 177
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSV--IGTPEFMAPEL 204
+H +HRD+K DNI ++ G +++ D G LR + S+ +GTP++++PE+
Sbjct: 178 VHRLG--YVHRDIKPDNILLD-RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 205 YEEDYNEL--------VDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK----LPG 252
+ D ++ G+ EMF + P+ + A+ Y K+ K LP
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY-ADSTAETYGKIVHYKEHLSLPL 293
Query: 253 AFYSIQDLEAQRFIGRCLVNASKRL---SAKELLLDPFL 288
+ + EA+ FI R L RL A + PF
Sbjct: 294 VDEGVPE-EARDFIQRLLCPPETRLGRGGAGDFRTHPFF 331
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 32/219 (14%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 19 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 72
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRR----VDIRAIKSWARQILQG 143
++ Y V ++ +TE G+L ++ K KY R VD+ A QI G
Sbjct: 73 VQLYAV---VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA------QIASG 123
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMA 201
+ Y+ + +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ A
Sbjct: 124 MAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEWTARQGAKFPIKWTA 180
Query: 202 PE--LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECAN 237
PE LY + DV+SFG+ + E+ T PY N
Sbjct: 181 PEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVN 218
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ ++H+ +
Sbjct: 22 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKL 75
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ +TE + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 76 VQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV 130
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECAN 237
LY + DV+SFG+ + E+ T PY N
Sbjct: 188 LYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S H +I+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 97
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 98 R----CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R S + + +
Sbjct: 154 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 270
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 271 CPGPVYRI 278
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S H +I+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 111
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 112 R----CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R S + + +
Sbjct: 168 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 284
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 285 CPGPVYRI 292
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 19 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 72
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRR----VDIRAIKSWARQILQG 143
++ Y V ++ +TE G+L ++ K KY R VD+ A QI G
Sbjct: 73 VQLYAV---VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA------QIASG 123
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMA 201
+ Y+ + +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ A
Sbjct: 124 MAYVERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTA 180
Query: 202 PE--LYEEDYNELVDVYSFGMCVLEMFT 227
PE LY + DV+SFG+ + E+ T
Sbjct: 181 PEAALYGR-FTIKSDVWSFGILLTELTT 207
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S H +I+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 96
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 97 R----CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R S + + +
Sbjct: 153 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 269
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 270 CPGPVYRI 277
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S H +I+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 88
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 89 R----CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R S + + +
Sbjct: 145 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 261
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 262 CPGPVYRI 269
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S H +I+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 113
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 114 R----CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R S + + +
Sbjct: 170 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 286
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 287 CPGPVYRI 294
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S H +I+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 123
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 124 R----CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R S + + +
Sbjct: 180 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 296
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 297 CPGPVYRI 304
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 19/223 (8%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F + +G G V+ LG + ++V + + + E ++ L H +
Sbjct: 12 FVQEIGSGQFGLVH------LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL 65
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRV-DIRAIKSWARQILQGLVYLHSR 150
++ Y + ++Q +TE G L +Y + R + + + +G+ YL
Sbjct: 66 VQLYG--VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-- 121
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPELYE- 206
+ VIHRDL N V G +K+ D G+ + + S GT ++ +PE++
Sbjct: 122 EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSF 179
Query: 207 EDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSG 248
Y+ DV+SFG+ + E+F+ + PY +N +++ + +++G
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTG 221
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S H +I+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 103
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 104 R----CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R S + + +
Sbjct: 160 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 276
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 277 CPGPVYRI 284
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 106 FNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIF 165
+ I + G L + + R ++ + +I+ L +LH +I+RD+K +NI
Sbjct: 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG--IIYRDIKLENIL 191
Query: 166 VNGHLGQVKIGDLGLAA--ILRGSKSAHSVIGTPEFMAPELY---EEDYNELVDVYSFGM 220
++ + G V + D GL+ + ++ A+ GT E+MAP++ + +++ VD +S G+
Sbjct: 192 LDSN-GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGV 250
Query: 221 CVLEMFTCEYPYS---ECANPAQIYKKVTSGKLP 251
+ E+ T P++ E + A+I +++ + P
Sbjct: 251 LMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 284
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G VYK V VA ++ + + + Q+ E+ +++ +H++++
Sbjct: 39 MGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSW------ARQILQGLVYLHS 149
D D ++ +G+L + + +D SW A+ G+ +LH
Sbjct: 97 GFSSDGDDLCLVYV--YMPNGSLLD---RLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS-KSAHSV-----IGTPEFMAPE 203
IHRD+K NI ++ KI D GLA R S K A +V +GT +MAPE
Sbjct: 152 NHH--IHRDIKSANILLDEAF-TAKISDFGLA---RASEKFAQTVMXXRIVGTTAYMAPE 205
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
+ D+YSFG+ +LE+ T
Sbjct: 206 ALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G VYK V VA ++ + + + Q+ E+ +++ +H++++
Sbjct: 39 MGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSW------ARQILQGLVYLHS 149
D D ++ +G+L + + +D SW A+ G+ +LH
Sbjct: 97 GFSSDGDDLCLVYV--YMPNGSLLD---RLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS-KSAHSV-----IGTPEFMAPE 203
IHRD+K NI ++ KI D GLA R S K A +V +GT +MAPE
Sbjct: 152 NHH--IHRDIKSANILLDEAF-TAKISDFGLA---RASEKFAQTVMXSRIVGTTAYMAPE 205
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
+ D+YSFG+ +LE+ T
Sbjct: 206 ALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S H +I+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM-EALIISKFNHQNIV 111
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 112 R----CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R S + + +
Sbjct: 168 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 284
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 285 CPGPVYRI 292
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 22 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ + E + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 76 VQLYAV---VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV 130
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
LY + DV+SFG+ + E+ T
Sbjct: 188 LYGR-FTIKSDVWSFGILLTELTT 210
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 22 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ + E + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 76 VQLYAV---VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV 130
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 187
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECAN 237
LY + DV+SFG+ + E+ T PY N
Sbjct: 188 LYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 22 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ + E + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 76 VQLYAV---VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV 130
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECAN 237
LY + DV+SFG+ + E+ T PY N
Sbjct: 188 LYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 189 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKL 242
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ +TE + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 243 VQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV 297
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GL ++ ++ +A P ++ APE
Sbjct: 298 ERMN--YVHRDLRAANILVGENL-VCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAA 354
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
LY + DV+SFG+ + E+ T
Sbjct: 355 LYGR-FTIKSDVWSFGILLTELTT 377
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 17/137 (12%)
Query: 155 IHRDLKCDNIF--VNGHLGQVKIGDLGLAAILR--GSKSAHSVIGTPEFMAPELYE--ED 208
+HRD+K DN+ VNGH +++ D G + G+ + +GTP++++PE+ + ED
Sbjct: 197 VHRDIKPDNVLLDVNGH---IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 209 ----YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYS-IQDL--E 261
Y D +S G+C+ EM E P+ + + Y K+ + + F S + D+ E
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIMNHEERFQFPSHVTDVSEE 312
Query: 262 AQRFIGRCLVNASKRLS 278
A+ I R + + +RL
Sbjct: 313 AKDLIQRLICSRERRLG 329
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 17/137 (12%)
Query: 155 IHRDLKCDNIF--VNGHLGQVKIGDLGLAAILR--GSKSAHSVIGTPEFMAPELYE--ED 208
+HRD+K DN+ VNGH +++ D G + G+ + +GTP++++PE+ + ED
Sbjct: 213 VHRDIKPDNVLLDVNGH---IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 209 ----YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYS-IQDL--E 261
Y D +S G+C+ EM E P+ + + Y K+ + + F S + D+ E
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIMNHEERFQFPSHVTDVSEE 328
Query: 262 AQRFIGRCLVNASKRLS 278
A+ I R + + +RL
Sbjct: 329 AKDLIQRLICSRERRLG 345
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 25/204 (12%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFY 95
+G+G VYK V VA ++ + + + Q+ E+ +++ +H++++
Sbjct: 33 MGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 96 TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSW------ARQILQGLVYLHS 149
D D ++ +G+L + + +D SW A+ G+ +LH
Sbjct: 91 GFSSDGDDLCLVYV--YMPNGSLLD---RLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 145
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKS------AHSVIGTPEFMAPE 203
IHRD+K NI ++ KI D GLA R S+ ++GT +MAPE
Sbjct: 146 NHH--IHRDIKSANILLDEAF-TAKISDFGLA---RASEKFAQXVMXXRIVGTTAYMAPE 199
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
+ D+YSFG+ +LE+ T
Sbjct: 200 ALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S H +I+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 137
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 138 R----CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R + + +
Sbjct: 194 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 310
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 311 CPGPVYRI 318
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 22 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ + E + G L ++ K KY R+ + A QI G+ Y+
Sbjct: 76 VQLYAV---VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV 130
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 131 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
LY + DV+SFG+ + E+ T
Sbjct: 188 LYGR-FTIKSDVWSFGILLTELTT 210
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKHDSII 92
LG GA VY+ + + + QV L E+ D+L L E ++S H +I+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM-EALIISKFNHQNIV 114
Query: 93 RFYTSWIDVDQKTFN--FITEMFTSGTLREYRKKYR-------RVDIRAIKSWARQILQG 143
R I V ++ + E+ G L+ + ++ R + + + AR I G
Sbjct: 115 R----CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 144 LVYLHSRDPPVIHRDLKCDNIFVN--GHLGQVKIGDLGLAA-ILRGS--KSAHSVIGTPE 198
YL IHRD+ N + G KIGD G+A I R + + +
Sbjct: 171 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 199 FMAPELYEED-YNELVDVYSFGMCVLEMFTCEY-PYSECANPAQIYKKVTSG-------K 249
+M PE + E + D +SFG+ + E+F+ Y PY +N ++ + VTSG
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKN 287
Query: 250 LPGAFYSI 257
PG Y I
Sbjct: 288 CPGPVYRI 295
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
E LG+G V+ +G +V + L + E ++ L+H+ +
Sbjct: 188 LEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRK----KYRRVDIRAIKSWARQILQGLVYL 147
++ Y V ++ + E + G+L ++ K KY R+ + A QI G+ Y+
Sbjct: 242 VQLYAV---VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYV 296
Query: 148 HSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-SAHSVIGTP-EFMAPE-- 203
+ +HRDL+ NI V +L K+ D GLA ++ ++ +A P ++ APE
Sbjct: 297 ERMN--YVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
Query: 204 LYEEDYNELVDVYSFGMCVLEMFT 227
LY + DV+SFG+ + E+ T
Sbjct: 354 LYGR-FTIKSDVWSFGILLTELTT 376
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 76 LYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREY-RKKYRRVDIRAIK 134
+ E + L H +++FY + + +TE ++G L Y R + ++ +
Sbjct: 50 FFQEAQTMMKLSHPKLVKFYG--VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL 107
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI 194
+ +G+ +L S IHRDL N V+ L VK+ D G+ + + SV
Sbjct: 108 EMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLC-VKVSDFGMTRYVLDDQYVSSV- 163
Query: 195 GTP---EFMAPELYEE-DYNELVDVYSFGMCVLEMFTC-EYPYSECANPAQIYKKVTSG 248
GT ++ APE++ Y+ DV++FG+ + E+F+ + PY N +++ KV+ G
Sbjct: 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-SEVVLKVSQG 221
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F + +G G V+ LG + ++V + + + E ++ L H +
Sbjct: 11 FVQEIGSGQFGLVH------LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRV-DIRAIKSWARQILQGLVYLHSR 150
++ Y + ++Q + E G L +Y + R + + + +G+ YL
Sbjct: 65 VQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-- 120
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPELYE- 206
+ VIHRDL N V G +K+ D G+ + + S GT ++ +PE++
Sbjct: 121 EASVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSF 178
Query: 207 EDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSG 248
Y+ DV+SFG+ + E+F+ + PY +N +++ + +++G
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTG 220
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 38/243 (15%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KHDSII 92
E +G G +V+K + + G A R + + D Q EV+ + L +H ++
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 74
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLRE-YRKKYRRVDI---RAIKSWARQILQGLVYLH 148
R++++W + D E G+L + + YR + +K Q+ +GL Y+H
Sbjct: 75 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 132
Query: 149 SRDPPVIHRDLKCDNIFVN------------------GHLGQVKIGDLGLAAILRGSKSA 190
S ++H D+K NIF++ + KIGDLG + +
Sbjct: 133 SMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 190
Query: 191 HSVIGTPEFMAPELYEEDYNEL--VDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG 248
G F+A E+ +E+Y L D+++ + V+ C + ++ G
Sbjct: 191 E---GDSRFLANEVLQENYTHLPKADIFALALTVV----CAAGAEPLPRNGDQWHEIRQG 243
Query: 249 KLP 251
+LP
Sbjct: 244 RLP 246
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 38/243 (15%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KHDSII 92
E +G G +V+K + + G A R + + D Q EV+ + L +H ++
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLRE-YRKKYRRVDI---RAIKSWARQILQGLVYLH 148
R++++W + D E G+L + + YR + +K Q+ +GL Y+H
Sbjct: 73 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 130
Query: 149 SRDPPVIHRDLKCDNIFVN------------------GHLGQVKIGDLGLAAILRGSKSA 190
S ++H D+K NIF++ + KIGDLG + +
Sbjct: 131 SMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 188
Query: 191 HSVIGTPEFMAPELYEEDYNEL--VDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG 248
G F+A E+ +E+Y L D+++ + V+ C + ++ G
Sbjct: 189 E---GDSRFLANEVLQENYTHLPKADIFALALTVV----CAAGAEPLPRNGDQWHEIRQG 241
Query: 249 KLP 251
+LP
Sbjct: 242 RLP 244
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 38/243 (15%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KHDSII 92
E +G G +V+K + + G A R + + D Q EV+ + L +H ++
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLRE-YRKKYRRVDI---RAIKSWARQILQGLVYLH 148
R++++W + D E G+L + + YR + +K Q+ +GL Y+H
Sbjct: 73 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 130
Query: 149 SRDPPVIHRDLKCDNIFVN------------------GHLGQVKIGDLGLAAILRGSKSA 190
S ++H D+K NIF++ + KIGDLG + +
Sbjct: 131 SMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 188
Query: 191 HSVIGTPEFMAPELYEEDYNEL--VDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG 248
G F+A E+ +E+Y L D+++ + V+ C + ++ G
Sbjct: 189 E---GDSRFLANEVLQENYTHLPKADIFALALTVV----CAAGAEPLPRNGDQWHEIRQG 241
Query: 249 KLP 251
+LP
Sbjct: 242 RLP 244
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F + +G G V+ LG + ++V + + + E ++ L H +
Sbjct: 14 FVQEIGSGQFGLVH------LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL 67
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRV-DIRAIKSWARQILQGLVYLHSR 150
++ Y + ++Q + E G L +Y + R + + + +G+ YL
Sbjct: 68 VQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-- 123
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPELYE- 206
+ VIHRDL N V G +K+ D G+ + + S GT ++ +PE++
Sbjct: 124 EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSF 181
Query: 207 EDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSG 248
Y+ DV+SFG+ + E+F+ + PY +N +++ + +++G
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTG 223
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 128/315 (40%), Gaps = 56/315 (17%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMR-SPDDLQRLYSEVHLLSTLKHDSIIRF 94
+G+G+ V AI+ A + N++ + +P D++R+ +EV L+ L H +I R
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 95 YTSWID-----------------------VDQKTFNF--------------ITEMFTSGT 117
Y + D +D T E +G+
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 118 LREYRKKYRRVDI-RAIKSWARQILQGLVYLHSRDPPVIHRDLKCDN-IFVNGHLGQVKI 175
+ +R+ V + I + RQI L YLH++ + HRD+K +N +F ++K+
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG--ICHRDIKPENFLFSTNKSFEIKL 211
Query: 176 GDLGLAAILRGSKSAH-----SVIGTPEFMAPELY---EEDYNELVDVYSFGMCVLEMFT 227
D GL+ + + GTP F+APE+ E Y D +S G+ + +
Sbjct: 212 VDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM 271
Query: 228 CEYPYSECANPAQIYKKVTSGKL--PGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLL 284
P+ N A +V + KL Y++ A+ + L N +R A L
Sbjct: 272 GAVPFPG-VNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330
Query: 285 DPFLA--SDEVKLLS 297
P+++ SD++ +S
Sbjct: 331 HPWISQFSDKIYKMS 345
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F + +G G V+ LG + ++V + + + E ++ L H +
Sbjct: 11 FVQEIGSGQFGLVH------LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRV-DIRAIKSWARQILQGLVYLHSR 150
++ Y + ++Q + E G L +Y + R + + + +G+ YL
Sbjct: 65 VQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-- 120
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPELYE- 206
+ VIHRDL N V G +K+ D G+ + + S GT ++ +PE++
Sbjct: 121 EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSF 178
Query: 207 EDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSG 248
Y+ DV+SFG+ + E+F+ + PY +N +++ + +++G
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTG 220
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 49/229 (21%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLK-HDSIIRF 94
LGKGA V+K+ID G VA ++ + ++ D QR + E+ +L+ L H++I+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIF--DAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 95 YTSW-IDVDQKTFNFITEMFT-------SGTLREYRKKYRRVDIRAIKSWARQILQGLVY 146
D D+ + M T + L K+Y Q+++ + Y
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY----------VVYQLIKVIKY 124
Query: 147 LHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-AILRGSKSAHSV------------ 193
LHS ++HRD+K NI +N VK+ D GL+ + + + +++
Sbjct: 125 LHS--GGLLHRDMKPSNILLNAEC-HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 194 ---------IGTPEFMAPE--LYEEDYNELVDVYSFGMCVLEMFTCEYP 231
+ T + APE L Y + +D++S G C+L C P
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLG-CILGEILCGKP 229
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 32 FEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
F + +G G V+ LG + ++V + + + E ++ L H +
Sbjct: 9 FVQEIGSGQFGLVH------LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL 62
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRV-DIRAIKSWARQILQGLVYLHSR 150
++ Y + ++Q + E G L +Y + R + + + +G+ YL
Sbjct: 63 VQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-- 118
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP---EFMAPELYE- 206
+ VIHRDL N V G +K+ D G+ + + S GT ++ +PE++
Sbjct: 119 EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSF 176
Query: 207 EDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSG 248
Y+ DV+SFG+ + E+F+ + PY +N +++ + +++G
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTG 218
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 38/243 (15%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTL-KHDSII 92
E +G G +V+K + + G A R + + D Q EV+ + L +H ++
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 70
Query: 93 RFYTSWIDVDQKTFNFITEMFTSGTLRE-YRKKYRRVDI---RAIKSWARQILQGLVYLH 148
R++++W + D E G+L + + YR + +K Q+ +GL Y+H
Sbjct: 71 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 128
Query: 149 SRDPPVIHRDLKCDNIFVN------------------GHLGQVKIGDLGLAAILRGSKSA 190
S ++H D+K NIF++ + KIGDLG + +
Sbjct: 129 SMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 186
Query: 191 HSVIGTPEFMAPELYEEDYNEL--VDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSG 248
G F+A E+ +E+Y L D+++ + V+ E P + + ++ G
Sbjct: 187 E---GDSRFLANEVLQENYTHLPKADIFALALTVVXAAGAE-PLPRNGDQ---WHEIRQG 239
Query: 249 KLP 251
+LP
Sbjct: 240 RLP 242
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 79 EVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRV-DIRAIKSWA 137
E ++ L H +++ Y + ++Q + E G L +Y + R + +
Sbjct: 72 EAEVMMKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 129
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
+ +G+ YL + VIHRDL N V G +K+ D G+ + + S GT
Sbjct: 130 LDVCEGMAYLE--EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSST-GTK 185
Query: 198 ---EFMAPELYE-EDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSG 248
++ +PE++ Y+ DV+SFG+ + E+F+ + PY +N +++ + +++G
Sbjct: 186 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTG 240
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 37/240 (15%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPD----DLQRLYSEVHLLSTLKHDSI 91
LG+GA V+ A L E V + L + + D QR E LL+ L+H I
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 105
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKY---------------RRVDIRAIKSW 136
+RF+ + + + + E G L + + + + + + +
Sbjct: 106 VRFFG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGT 196
A Q+ G+VYL +HRDL N V L VKIGD G++ + S + V G
Sbjct: 164 ASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGL-VVKIGDFGMSRDIY-STDYYRVGGR 219
Query: 197 P----EFMAPE--LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSGK 249
+M PE LY + E DV+SFG+ + E+FT + P+ + +N I +T G+
Sbjct: 220 TMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQGR 277
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 35/239 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPD----DLQRLYSEVHLLSTLKHDSI 91
LG+GA V+ A L E V + L + + D QR E LL+ L+H I
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 82
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKY---------------RRVDIRAIKSW 136
+RF+ + + + + E G L + + + + + + +
Sbjct: 83 VRFFG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSV 193
A Q+ G+VYL +HRDL N V L VKIGD G++ + + +
Sbjct: 141 ASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGL-VVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 194 IGTPEFMAPE--LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSGK 249
+ +M PE LY + E DV+SFG+ + E+FT + P+ + +N I +T G+
Sbjct: 198 MLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQGR 254
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 35/239 (14%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPD----DLQRLYSEVHLLSTLKHDSI 91
LG+GA V+ A L E V + L + + D QR E LL+ L+H I
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 76
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKY---------------RRVDIRAIKSW 136
+RF+ + + + + E G L + + + + + + +
Sbjct: 77 VRFFG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGS---KSAHSV 193
A Q+ G+VYL +HRDL N V L VKIGD G++ + + +
Sbjct: 135 ASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGL-VVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 194 IGTPEFMAPE--LYEEDYNELVDVYSFGMCVLEMFT-CEYPYSECANPAQIYKKVTSGK 249
+ +M PE LY + E DV+SFG+ + E+FT + P+ + +N I +T G+
Sbjct: 192 MLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQGR 248
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLG--LAAILRGSKSAHSVIGTPEFMAPELYEE----- 207
+HRD+K DNI ++ + G +++ D G L + G+ + +GTP++++PE+ +
Sbjct: 197 VHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 208 -DYNELVDVYSFGMCVLEMFTCEYPY 232
Y D +S G+C+ EM E P+
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 134 KSWAR----QILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR--GS 187
+ WAR +++ L +HS IHRD+K DN+ ++ G +K+ D G + G
Sbjct: 167 EKWARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGM 223
Query: 188 KSAHSVIGTPEFMAPELYEED-----YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY 242
+ +GTP++++PE+ + Y D +S G+ + EM + P+ + Y
Sbjct: 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY-ADSLVGTY 282
Query: 243 KKVTSGKLPGAFYSIQDL--EAQRFIGRCLVNASKRLS 278
K+ + K F D+ EA+ I L + RL
Sbjct: 283 SKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLG 320
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 134 KSWAR----QILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR--GS 187
+ WAR +++ L +HS IHRD+K DN+ ++ G +K+ D G + G
Sbjct: 172 EKWARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGM 228
Query: 188 KSAHSVIGTPEFMAPELYEED-----YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY 242
+ +GTP++++PE+ + Y D +S G+ + EM + P+ + Y
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY-ADSLVGTY 287
Query: 243 KKVTSGKLPGAFYSIQDL--EAQRFIGRCLVNASKRLS 278
K+ + K F D+ EA+ I L + RL
Sbjct: 288 SKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLG 325
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 134 KSWAR----QILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILR--GS 187
+ WAR +++ L +HS IHRD+K DN+ ++ G +K+ D G + G
Sbjct: 172 EKWARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGM 228
Query: 188 KSAHSVIGTPEFMAPELYEED-----YNELVDVYSFGMCVLEMFTCEYPYSECANPAQIY 242
+ +GTP++++PE+ + Y D +S G+ + EM + P+ + Y
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY-ADSLVGTY 287
Query: 243 KKVTSGKLPGAFYSIQDL--EAQRFIGRCLVNASKRLS 278
K+ + K F D+ EA+ I L + RL
Sbjct: 288 SKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLG 325
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 89
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 136
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 137 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 193
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 244
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 245 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 88
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 135
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 136 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 192
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 243
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 244 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 101
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 148
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 149 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 205
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIGGQV--FFR 256
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 257 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 102
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 149
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 150 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 206
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIGGQV--FFR 257
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 258 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
Query: 26 NGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNEL-MRSPDDLQRLYSEVHLLS 84
+ RY L + LG G TV+ A D V VA VR +++ + +D +L V+
Sbjct: 18 DARYILVRK-LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 85 TLKHDS-----IIRFYTSWIDVDQKTFNFITEMFTSG-TLREYRKKY--RRVDIRAIKSW 136
K DS I++ + + + G L KKY R + + +K
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVN-----GHLGQVKIGDLGLAAILRGSKSAH 191
++Q+L GL Y+H R +IH D+K +N+ + +L Q+KI DLG A +
Sbjct: 137 SKQLLLGLDYMHRR-CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHYT 193
Query: 192 SVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPY 232
+ I T E+ +PE L + D++S + E+ T ++ +
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 69
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 116
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 117 WQVLEAVRHCHNXG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 173
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 224
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 225 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 102
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 149
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 150 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 206
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIGGQV--FFR 257
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 258 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 26 NGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNEL-MRSPDDLQRLYSEVHLLS 84
+ RY L + LG G TV+ A D V VA VR +++ + +D +L V+
Sbjct: 18 DARYILVRK-LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 85 TLKHDSI-IRFYTSWID-VDQKTFN-----FITEMFTSGTLREYRK-KYRRVDIRAIKSW 136
K DS+ +D + K N + E+ L +K ++R + + +K
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 137 ARQILQGLVYLHSRDPPVIHRDLKCDNIFVN-----GHLGQVKIGDLGLAAILRGSKSAH 191
++Q+L GL Y+H R +IH D+K +N+ + +L Q+KI DLG A +
Sbjct: 137 SKQLLLGLDYMHRR-CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHYT 193
Query: 192 SVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYPY 232
+ I T E+ +PE L + D++S + E+ T ++ +
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 25/203 (12%)
Query: 37 GKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYT 96
G+G VYK V VA ++ + + + Q+ E+ + + +H++++
Sbjct: 31 GEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 97 SWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSW------ARQILQGLVYLHSR 150
D D ++ +G+L + + +D SW A+ G+ +LH
Sbjct: 89 FSSDGDDLCLVYV--YXPNGSLLD---RLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN 143
Query: 151 DPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKS------AHSVIGTPEFMAPEL 204
IHRD+K NI ++ KI D GLA R S+ ++GT + APE
Sbjct: 144 HH--IHRDIKSANILLDEAF-TAKISDFGLA---RASEKFAQXVXXSRIVGTTAYXAPEA 197
Query: 205 YEEDYNELVDVYSFGMCVLEMFT 227
+ D+YSFG+ +LE+ T
Sbjct: 198 LRGEITPKSDIYSFGVVLLEIIT 220
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 116
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 163
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 164 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 220
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 271
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 272 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 96
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 97 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 143
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 144 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 200
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 251
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 252 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 285
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 88
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 135
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 136 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 192
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 243
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 244 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 101
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 148
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 149 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 205
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIGGQV--FFR 256
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 257 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 89
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 136
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 137 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 193
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 244
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 245 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
I+ + ++L+ L Y HS+ ++HRD+K N+ ++ L ++++ D GLA K +
Sbjct: 127 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 193 VIGTPEFMAPELYE--EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ + F PEL +DY+ +D++S G M + P+
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 121
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 122 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 168
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 169 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 225
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 276
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 277 QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 310
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 89
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 136
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 137 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 193
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPY 232
+ PE Y + V+S G+ + +M + P+
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
I+ + ++L+ L Y HS+ ++HRD+K N+ ++ L ++++ D GLA K +
Sbjct: 128 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 185
Query: 193 VIGTPEFMAPELYE--EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ + F PEL +DY+ +D++S G M + P+
Sbjct: 186 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
I+ + ++L+ L Y HS+ ++HRD+K N+ ++ L ++++ D GLA K +
Sbjct: 128 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 185
Query: 193 VIGTPEFMAPELYE--EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ + F PEL +DY+ +D++S G M + P+
Sbjct: 186 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 101
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 148
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 149 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 205
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIGGQV--FFR 256
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 257 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 108
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 155
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 156 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 212
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 263
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 264 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
I+ + ++L+ L Y HS+ ++HRD+K N+ ++ L ++++ D GLA K +
Sbjct: 127 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 193 VIGTPEFMAPELYE--EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ + F PEL +DY+ +D++S G M + P+
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
I+ + ++L+ L Y HS+ ++HRD+K N+ ++ L ++++ D GLA K +
Sbjct: 148 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 205
Query: 193 VIGTPEFMAPELYE--EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ + F PEL +DY+ +D++S G M + P+
Sbjct: 206 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 102
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 149
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 150 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 206
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIGGQV--FFR 257
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 258 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
I+ + ++L+ L Y HS+ ++HRD+K N+ ++ L ++++ D GLA K +
Sbjct: 127 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 193 VIGTPEFMAPELYE--EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ + F PEL +DY+ +D++S G M + P+
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
I+ + ++L+ L Y HS+ ++HRD+K N+ ++ L ++++ D GLA K +
Sbjct: 127 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 193 VIGTPEFMAPELYE--EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ + F PEL +DY+ +D++S G M + P+
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 101
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 148
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 149 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 205
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPY 232
+ PE Y + V+S G+ + +M + P+
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 117 TLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIG 176
L+ + + R + + I + Q+ + + ++HS + HRD+K N+ VN +K+
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG--ICHRDIKPQNLLVNSKDNTLKLC 184
Query: 177 DLGLAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVL 223
D G A L S+ + + I + + APEL +Y +D++S G CV
Sbjct: 185 DFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIG-CVF 232
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 102
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 149
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 150 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 206
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIGGQV--FFR 257
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 258 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 116
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 163
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 164 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 220
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPY 232
+ PE Y + V+S G+ + +M + P+
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
I+ + ++L+ L Y HS+ ++HRD+K N+ ++ L ++++ D GLA K +
Sbjct: 129 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 186
Query: 193 VIGTPEFMAPELYE--EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ + F PEL +DY+ +D++S G M + P+
Sbjct: 187 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
I+ + ++L+ L Y HS+ ++HRD+K N+ ++ L ++++ D GLA K +
Sbjct: 127 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 193 VIGTPEFMAPELYE--EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ + F PEL +DY+ +D++S G M + P+
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 74
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 121
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 122 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 178
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPY 232
+ PE Y + V+S G+ + +M + P+
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 133 IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS 192
I+ + ++L+ L Y HS+ ++HRD+K N+ ++ L ++++ D GLA K +
Sbjct: 127 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 184
Query: 193 VIGTPEFMAPELYE--EDYNELVDVYSFGMCVLEMFTCEYPY 232
+ + F PEL +DY+ +D++S G M + P+
Sbjct: 185 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 74
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 121
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 122 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 178
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 229
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 230 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 74
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 121
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 122 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 178
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPY 232
+ PE Y + V+S G+ + +M + P+
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 73
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 74 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 120
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H+ V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 121 WQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 177
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 228
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 229 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 69
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 116
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H + V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 117 WQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 173
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIGGQV--FFR 224
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 225 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 72
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 73 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 119
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H + V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 120 WQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 176
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 227
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 228 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 261
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 73
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEPVQDLFDFITE---RGALQE----------ELARSFF 120
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H + V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 121 WQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 177
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 228
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 229 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEV--HLLSTLKHDSIIR 93
+ G + +Y A+D V V L L+ S D + + L+ + H SI++
Sbjct: 88 IAHGGLGWIYLALDR----NVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQ 143
Query: 94 FY--TSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRD 151
+ D +I + G + R K +++ + ++ +IL L YLHS
Sbjct: 144 IFNFVEHTDRHGDPVGYIVMEYVGGQSLK-RSKGQKLPVAEAIAYLLEILPALSYLHSIG 202
Query: 152 PPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEEDYNE 211
+++ DLK +NI + Q+K+ DLG + + S + GTP F APE+
Sbjct: 203 --LVYNDLKPENIMLTEE--QLKLIDLGAVSRI---NSFGYLYGTPGFQAPEIVRTGPTV 255
Query: 212 LVDVYSFGMCVLEMFTCEYP 231
D+Y+ G L T + P
Sbjct: 256 ATDIYTVGRT-LAALTLDLP 274
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 46/274 (16%)
Query: 35 VLGKGAMKTVYKAIDEVLGVEVAWNQV---RLNELMRSPDDLQRLYSEVHLLSTLKH--D 89
+LG G +VY I + VA V R+++ P+ R+ EV LL +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 69
Query: 90 SIIRFYTSWIDVD------------QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWA 137
+IR + D Q F+FITE G L+E +S+
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQE----------ELARSFF 116
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTP 197
Q+L+ + + H + V+HRD+K +NI ++ + G++K+ D G A+L+ + GT
Sbjct: 117 WQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTR 173
Query: 198 EFMAPEL--YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFY 255
+ PE Y + V+S G+ + +M + P+ +++ G++ F
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------DEEIIRGQV--FFR 224
Query: 256 SIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 288
E Q I CL + S R + +E+ P++
Sbjct: 225 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 103 QKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCD 162
Q F+FITE G L+E +S+ Q+L+ + + H+ V+HRD+K +
Sbjct: 142 QDLFDFITE---RGALQE----------ELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 186
Query: 163 NIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL--YEEDYNELVDVYSFGM 220
NI ++ + G++K+ D G A+L+ + GT + PE Y + V+S G+
Sbjct: 187 NILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 245
Query: 221 CVLEMFTCEYPY 232
+ +M + P+
Sbjct: 246 LLYDMVCGDIPF 257
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 74 QRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRA- 132
Q +E +++ L+H ++++ ++ ++ +TE G+L +Y + R +
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVE-EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD 102
Query: 133 -IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAH 191
+ ++ + + + YL + +HRDL N+ V+ K+ D GL +K A
Sbjct: 103 CLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSED-NVAKVSDFGL------TKEAS 153
Query: 192 SVIGTPE----FMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
S T + + APE L E+ ++ DV+SFG+ + E+++
Sbjct: 154 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 74 QRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRA- 132
Q +E +++ L+H ++++ ++ ++ +TE G+L +Y + R +
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVE-EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD 289
Query: 133 -IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAH 191
+ ++ + + + YL + +HRDL N+ V+ K+ D GL +K A
Sbjct: 290 CLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSED-NVAKVSDFGL------TKEAS 340
Query: 192 SVIGTPE----FMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
S T + + APE L E+ ++ DV+SFG+ + E+++
Sbjct: 341 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 74 QRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRA- 132
Q +E +++ L+H ++++ ++ ++ +TE G+L +Y + R +
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVE-EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD 117
Query: 133 -IKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAH 191
+ ++ + + + YL + +HRDL N+ V+ K+ D GL +K A
Sbjct: 118 CLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSED-NVAKVSDFGL------TKEAS 168
Query: 192 SVIGTPE----FMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
S T + + APE L E+ ++ DV+SFG+ + E+++
Sbjct: 169 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+GKG+ V KA D + VA VR + ++ E+ +L L+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH-----RQAAEEIRILEHLRKQDKDN 157
Query: 94 FYTSWIDVDQKTF-NFITEMFTSGTLREY----RKKYRRVDIRAIKSWARQILQGLVYLH 148
++ TF N I F ++ Y + K++ + ++ +A ILQ L LH
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 149 SRDPPVIHRDLKCDNIFV--NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LY 205
+IH DLK +NI + G G +K+ D G + + ++ I + + APE +
Sbjct: 218 KNR--IIHCDLKPENILLKQQGRSG-IKVIDFGSSCY--EHQRVYTXIQSRFYRAPEVIL 272
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYP 231
Y +D++S G C+L YP
Sbjct: 273 GARYGMPIDMWSLG-CILAELLTGYP 297
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 34 EVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIR 93
+V+GKG+ V KA D + VA VR + ++ E+ +L L+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH-----RQAAEEIRILEHLRKQDKDN 157
Query: 94 FYTSWIDVDQKTF-NFITEMFTSGTLREY----RKKYRRVDIRAIKSWARQILQGLVYLH 148
++ TF N I F ++ Y + K++ + ++ +A ILQ L LH
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 149 SRDPPVIHRDLKCDNIFV--NGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPE-LY 205
+IH DLK +NI + G G +K+ D G + + ++ I + + APE +
Sbjct: 218 KNR--IIHCDLKPENILLKQQGRSG-IKVIDFGSSCY--EHQRVYTXIQSRFYRAPEVIL 272
Query: 206 EEDYNELVDVYSFGMCVLEMFTCEYP 231
Y +D++S G C+L YP
Sbjct: 273 GARYGMPIDMWSLG-CILAELLTGYP 297
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIG 195
+ I + + YLHS + + HRD+K +N+ +K+ D G A S +
Sbjct: 124 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 181
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP--YSE--CANPAQIYKKVTSGK- 249
TP ++APE L E Y++ D++S G+ ++ + C YP YS A + ++ G+
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 240
Query: 250 -LPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPF 306
P +S E + I L ++R++ E + P+ ++ TK+ Q P
Sbjct: 241 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW-------IMQSTKVPQTPL 292
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIG 195
+ I + + YLHS + + HRD+K +N+ +K+ D G A S +
Sbjct: 130 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 187
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP--YSE--CANPAQIYKKVTSGK- 249
TP ++APE L E Y++ D++S G+ ++ + C YP YS A + ++ G+
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 246
Query: 250 -LPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPF 306
P +S E + I L ++R++ E + P+ ++ TK+ Q P
Sbjct: 247 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW-------IMQSTKVPQTPL 298
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIG 195
+ I + + YLHS + + HRD+K +N+ +K+ D G A S +
Sbjct: 122 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 179
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP--YSE--CANPAQIYKKVTSGK- 249
TP ++APE L E Y++ D++S G+ ++ + C YP YS A + ++ G+
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238
Query: 250 -LPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPF 306
P +S E + I L ++R++ E + P+ ++ TK+ Q P
Sbjct: 239 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW-------IMQSTKVPQTPL 290
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIG 195
+ I + + YLHS + + HRD+K +N+ +K+ D G A S +
Sbjct: 129 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 186
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP--YSE--CANPAQIYKKVTSGK- 249
TP ++APE L E Y++ D++S G+ ++ + C YP YS A + ++ G+
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 245
Query: 250 -LPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPF 306
P +S E + I L ++R++ E + P+ ++ TK+ Q P
Sbjct: 246 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW-------IMQSTKVPQTPL 297
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIG 195
+ I + + YLHS + + HRD+K +N+ +K+ D G A S +
Sbjct: 128 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 185
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP--YSE--CANPAQIYKKVTSGK- 249
TP ++APE L E Y++ D++S G+ ++ + C YP YS A + ++ G+
Sbjct: 186 TPYYVAPEVLGPEKYDKSCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 244
Query: 250 -LPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPF 306
P +S E + I L ++R++ E + P+ ++ TK+ Q P
Sbjct: 245 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW-------IMQSTKVPQTPL 296
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIG 195
+ I + + YLHS + + HRD+K +N+ +K+ D G A S +
Sbjct: 123 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 180
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP--YSE--CANPAQIYKKVTSGK- 249
TP ++APE L E Y++ D++S G+ ++ + C YP YS A + ++ G+
Sbjct: 181 TPYYVAPEVLGPEKYDKSCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 239
Query: 250 -LPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPF 306
P +S E + I L ++R++ E + P+ ++ TK+ Q P
Sbjct: 240 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW-------IMQSTKVPQTPL 291
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIG 195
+ I + + YLHS + + HRD+K +N+ +K+ D G A S +
Sbjct: 124 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 181
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP--YSE--CANPAQIYKKVTSGK- 249
TP ++APE L E Y++ D++S G+ ++ + C YP YS A + ++ G+
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 240
Query: 250 -LPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPF 306
P +S E + I L ++R++ E + P+ ++ TK+ Q P
Sbjct: 241 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW-------IMQSTKVPQTPL 292
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 15/190 (7%)
Query: 70 PDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREY-RKKYRRV 128
PD + E +L H +I+R + ++ + E+ G + R + R+
Sbjct: 153 PDLKAKFLQEARILKQYSHPNIVRLIG--VCTQKQPIYIVMELVQGGDFLTFLRTEGARL 210
Query: 129 DIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-----AI 183
++ + G+ YL S+ IHRDL N V +KI D G++ +
Sbjct: 211 RVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVT-EKNVLKISDFGMSREEADGV 267
Query: 184 LRGSKSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTC-EYPYSECANPAQI 241
S V ++ APE L Y+ DV+SFG+ + E F+ PY +N
Sbjct: 268 XAASGGLRQV--PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR 325
Query: 242 YKKVTSGKLP 251
G+LP
Sbjct: 326 EFVEKGGRLP 335
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIG 195
+ I + + YLHS + + HRD+K +N+ +K+ D G A S +
Sbjct: 168 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 225
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP--YSE--CANPAQIYKKVTSGK- 249
TP ++APE L E Y++ D++S G+ ++ + C YP YS A + ++ G+
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 284
Query: 250 -LPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPF 306
P +S E + I L ++R++ E + P+ ++ TK+ Q P
Sbjct: 285 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW-------IMQSTKVPQTPL 336
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHD-SIIRF 94
LG+G V++AI+ + N+ + ++++ P ++ E+ +L L+ +II
Sbjct: 45 LGRGKYSEVFEAIN------ITNNEKVVVKILK-PVKKNKIKREIKILENLRGGPNIITL 97
Query: 95 YTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPV 154
D +T + E + ++ + DIR + +IL+ L Y HS +
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--I 152
Query: 155 IHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY--EEDYNEL 212
+HRD+K N+ ++ ++++ D GLA + + + + F PEL + Y+
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 213 VDVYSFGMCVLEMFTCEYPY 232
+D++S G + M + P+
Sbjct: 213 LDMWSLGCMLASMIFRKEPF 232
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHL--GQVKIGDLGLAAILRGSKSAHSVIG 195
+ I + + YLHS + + HRD+K +N+ +K+ D G A S +
Sbjct: 174 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 231
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP--YSE--CANPAQIYKKVTSGK- 249
TP ++APE L E Y++ D++S G+ ++ + C YP YS A + ++ G+
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 290
Query: 250 -LPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPF 306
P +S E + I L ++R++ E + P+ ++ TK+ Q P
Sbjct: 291 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW-------IMQSTKVPQTPL 342
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 15/190 (7%)
Query: 70 PDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREY-RKKYRRV 128
PD + E +L H +I+R + ++ + E+ G + R + R+
Sbjct: 153 PDLKAKFLQEARILKQYSHPNIVRLIG--VCTQKQPIYIVMELVQGGDFLTFLRTEGARL 210
Query: 129 DIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA-----AI 183
++ + G+ YL S+ IHRDL N V +KI D G++ +
Sbjct: 211 RVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVT-EKNVLKISDFGMSREEADGV 267
Query: 184 LRGSKSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTC-EYPYSECANPAQI 241
S V ++ APE L Y+ DV+SFG+ + E F+ PY +N
Sbjct: 268 YAASGGLRQV--PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR 325
Query: 242 YKKVTSGKLP 251
G+LP
Sbjct: 326 EFVEKGGRLP 335
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIG 195
+ I + + YLHS + + HRD+K +N+ +K+ D G A S +
Sbjct: 138 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 195
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP--YSE--CANPAQIYKKVTSGK- 249
TP ++APE L E Y++ D++S G+ ++ + C YP YS A + ++ G+
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 254
Query: 250 -LPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPF 306
P +S E + I L ++R++ E + P+ ++ TK+ Q P
Sbjct: 255 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW-------IMQSTKVPQTPL 306
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
+II+ + D KT + E + ++ + DIR + ++L+ L Y HS
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRF---YMYELLKALDYCHS 150
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY--EE 207
+ ++HRD+K N+ ++ ++++ D GLA ++ + + + F PEL +
Sbjct: 151 KG--IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 208
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPY 232
Y+ +D++S G + M P+
Sbjct: 209 MYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 20/179 (11%)
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIG 195
+ I + + YLHS + + HRD+K +N+ +K+ D G A S
Sbjct: 122 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCY 179
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP--YSE--CANPAQIYKKVTSGK- 249
TP ++APE L E Y++ D++S G+ ++ + C YP YS A + ++ G+
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238
Query: 250 -LPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPF 306
P +S E + I L ++R++ E + P+ ++ TK+ Q P
Sbjct: 239 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW-------IMQSTKVPQTPL 290
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 90 SIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHS 149
+II+ + D KT + E + ++ + DIR + ++L+ L Y HS
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRF---YMYELLKALDYCHS 155
Query: 150 RDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY--EE 207
+ ++HRD+K N+ ++ ++++ D GLA ++ + + + F PEL +
Sbjct: 156 KG--IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 213
Query: 208 DYNELVDVYSFGMCVLEMFTCEYPY 232
Y+ +D++S G + M P+
Sbjct: 214 MYDYSLDMWSLGCMLASMIFRREPF 238
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVI 194
S++ Q+ +G+ +L SR IHRDL NI ++ + VKI D GLA + +
Sbjct: 203 SYSFQVARGMEFLSSRK--CIHRDLAARNILLSEN-NVVKICDFGLARDIYKNPDYVRKG 259
Query: 195 GTP---EFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
T ++MAPE ++++ Y+ DV+S+G+ + E+F+
Sbjct: 260 DTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 16/207 (7%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQV-------RLNELMRSPDDLQRLYSEVHLLST 85
+ + G+ V +D G+ VA +V R ++ +R+ E+ LL+
Sbjct: 27 QRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNH 85
Query: 86 LKHDSIIRFYTSWIDVDQKTFN---FITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQ 142
H +I+ ++ ++ + +TE+ + + + + + I+ + IL
Sbjct: 86 FHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILL 145
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAP 202
GL LH + V+HRDL NI + + + I D LA + + + AP
Sbjct: 146 GLHVLH--EAGVVHRDLHPGNILLADN-NDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 203 ELYEE--DYNELVDVYSFGMCVLEMFT 227
EL + + +LVD++S G + EMF
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 16/207 (7%)
Query: 33 EEVLGKGAMKTVYKAIDEVLGVEVAWNQV-------RLNELMRSPDDLQRLYSEVHLLST 85
+ + G+ V +D G+ VA +V R ++ +R+ E+ LL+
Sbjct: 27 QRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNH 85
Query: 86 LKHDSIIRFYTSWIDVDQKTFN---FITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQ 142
H +I+ ++ ++ + +TE+ + + + + + I+ + IL
Sbjct: 86 FHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILL 145
Query: 143 GLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAP 202
GL LH + V+HRDL NI + + + I D LA + + + AP
Sbjct: 146 GLHVLH--EAGVVHRDLHPGNILLADN-NDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 203 ELYEE--DYNELVDVYSFGMCVLEMFT 227
EL + + +LVD++S G + EMF
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFV--------NGHLG----QVKIGDLGLAA 182
S RQI G+ +LHS +IHRDLK NI V + G ++ I D GL
Sbjct: 119 SLLRQIASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 183 ILRGSKSA-----HSVIGTPEFMAPELYEEDYN--------ELVDVYSFGMCVL 223
L +S+ ++ GT + APEL EE N +D++S G CV
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG-CVF 229
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWG 177
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 178 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 118 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWG 175
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 176 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWG 177
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 178 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 119 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWG 176
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 177 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWG 177
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 178 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVLIDHEHRKLRLIDWG 177
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 178 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWG 177
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 178 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWG 177
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 178 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWG 177
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 178 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWG 177
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 178 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 125 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWG 182
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 183 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 119 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWG 176
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 177 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 120 EYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLG 179
++++ Y+ + I+ + +IL+ L Y HS ++HRD+K N+ ++ ++++ D G
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWG 177
Query: 180 LAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPY 232
LA + + + + F PEL + Y+ +D++S G + M + P+
Sbjct: 178 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 104 KTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDN 163
+T + E + ++ R+ DIR + +IL+ L Y HS ++HRD+K N
Sbjct: 107 RTPALVFEHVNNTDFKQLRQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 161
Query: 164 IFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELY--EEDYNELVDVYSFGMC 221
+ ++ ++++ D GLA + + + + F PEL + Y+ +D++S G
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 222 VLEMFTCEYPY 232
+ M + P+
Sbjct: 222 LASMIFRKEPF 232
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 122 RKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFV 166
+ Y+ + +R +KS RQ+LQGL YLHS+ +IH D+K +NI +
Sbjct: 131 KSNYQGLPVRCVKSIIRQVLQGLDYLHSK-CKIIHTDIKPENILM 174
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 138 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ--VKIGDLGLAAILRGSKSAHSVIG 195
+ I + + YLHS + + HRD+K +N+ +K+ D G A S +
Sbjct: 168 KSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 225
Query: 196 TPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTCEYP 231
TP ++APE L E Y++ D +S G+ + + C YP
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDXWSLGV-IXYILLCGYP 261
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 142 QGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-----VIGT 196
+GL YLH+R +IHRD+K NI ++ + KI D G++ +G++ + V GT
Sbjct: 150 RGLHYLHTR--AIIHRDVKSINILLDENFVP-KITDFGISK--KGTELGQTHLXXVVKGT 204
Query: 197 PEFMAPELY-EEDYNELVDVYSFGMCVLEMF 226
++ PE + + E DVYSFG+ + E+
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 142 QGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHS-----VIGT 196
+GL YLH+R +IHRD+K NI ++ + KI D G++ +G++ + V GT
Sbjct: 150 RGLHYLHTR--AIIHRDVKSINILLDENFVP-KITDFGISK--KGTELDQTHLXXVVKGT 204
Query: 197 PEFMAPELY-EEDYNELVDVYSFGMCVLEMF 226
++ PE + + E DVYSFG+ + E+
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 37/220 (16%)
Query: 36 LGKGAMKTVYKA----IDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
LG+GA V +A ID+ V++ + + + + L SE+ +L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR----------------VDIRAIKS 135
+ ITE G L Y + R + + +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 136 WARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGSK 188
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 144 YSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 201 ARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 37/220 (16%)
Query: 36 LGKGAMKTVYKA----IDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
LG+GA V +A ID+ V++ + + + + L SE+ +L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR----------------VDIRAIKS 135
+ ITE G L Y + R + + +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 136 WARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGSK 188
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 144 YSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 201 ARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 26/213 (12%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNE-LMRSPDDLQRLYSE-----VHLLS 84
+F E LG+G ++K + +G + Q+ E L++ D R YSE ++S
Sbjct: 11 IFNESLGQGTFTKIFKGVRREVG---DYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 85 TLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR-VDIRAIKSWARQILQG 143
L H ++ Y + D+ + E G+L Y KK + ++I A+Q+
Sbjct: 68 KLSHKHLVLNYGVCVCGDENI--LVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA 125
Query: 144 LVYLHSRDPPVIHRDLKCDNIFV-------NGHLGQVKIGDLGLAAILRGSKSAHSVIGT 196
+ +L +IH ++ NI + G+ +K+ D G++ + I
Sbjct: 126 MHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI-- 181
Query: 197 PEFMAPELYE--EDYNELVDVYSFGMCVLEMFT 227
++ PE E ++ N D +SFG + E+ +
Sbjct: 182 -PWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 37/220 (16%)
Query: 36 LGKGAMKTVYKA----IDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
LG+GA V +A ID+ V++ + + + + L SE+ +L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTV--AVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR----------------VDIRAIKS 135
+ ITE G L Y + R + + +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 136 WARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGSK 188
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 144 YSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 201 ARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFV--------NGHLG----QVKIGDLGLAA 182
S RQI G+ +LHS +IHRDLK NI V + G ++ I D GL
Sbjct: 119 SLLRQIASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 183 ILRGSK-----SAHSVIGTPEFMAPELYEEDYN--------ELVDVYSFGMCVL 223
L + + ++ GT + APEL EE N +D++S G CV
Sbjct: 177 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG-CVF 229
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFV--------NGHLG----QVKIGDLGLAA 182
S RQI G+ +LHS +IHRDLK NI V + G ++ I D GL
Sbjct: 137 SLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 183 ILRGSK-----SAHSVIGTPEFMAPELYEED----YNELVDVYSFGMCVL 223
L + + ++ GT + APEL EE +D++S G CV
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG-CVF 243
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFV--------NGHLG----QVKIGDLGLAA 182
S RQI G+ +LHS +IHRDLK NI V + G ++ I D GL
Sbjct: 137 SLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 183 ILRGSK-----SAHSVIGTPEFMAPELYEED----YNELVDVYSFGMCVL 223
L + + ++ GT + APEL EE +D++S G CV
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG-CVF 243
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 17/102 (16%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLA--------AILRG 186
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA + +G
Sbjct: 143 CYSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 187 SKSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 200 DARL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGS 187
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 152 CYSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 188 KSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 209 DARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGS 187
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 152 CYSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 188 KSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 209 DARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGS 187
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 202 CYSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKG 258
Query: 188 KSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 259 DARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGS 187
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 154 CYSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 188 KSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 211 DARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGS 187
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 152 CYSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 188 KSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 209 DARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGS 187
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 197 CYSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKG 253
Query: 188 KSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 254 DARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 16/122 (13%)
Query: 136 WARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGSK 188
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 149 YSFQVAKGMEFLASRK--XIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFTC-EYPYSECANPAQIYKKVT 246
+ + ++MAPE +++ Y DV+SFG+ + E+F+ PY + +++
Sbjct: 206 ARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLK 261
Query: 247 SG 248
G
Sbjct: 262 EG 263
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGS 187
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 152 CYSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 188 KSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 209 DARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGS 187
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 204 CYSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKG 260
Query: 188 KSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 261 DARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGS 187
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 195 CYSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKG 251
Query: 188 KSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 252 DARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 135 SWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGS 187
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 189 CYSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 188 KSAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 246 DARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 136 WARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGSK 188
++ Q+ +G+ +L SR IHRDL NI ++ VKI D GLA +R
Sbjct: 153 YSFQVAKGMEFLASRK--XIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 189 SAHSVIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ + ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 210 ARLPL----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 36 LGKGAMKTVYKAIDEVLGVEVAWN----QVRLNELMRSPDDLQRLYSEVHLLSTLKHDSI 91
LG+GA V +A + G++ V++ + + + + L SE+ +L + H
Sbjct: 35 LGRGAFGQVIEA--DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 92 IRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR------------VDIRAIKSWARQ 139
+ I E G L Y + R + + + ++ Q
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 140 ILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-------ILRGSKSAHS 192
+ +G+ +L SR IHRDL NI ++ VKI D GLA +R +
Sbjct: 153 VAKGMEFLASRK--XIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 193 VIGTPEFMAPE-LYEEDYNELVDVYSFGMCVLEMFT 227
+ ++MAPE +++ Y DV+SFG+ + E+F+
Sbjct: 210 L----KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 17/227 (7%)
Query: 33 EEVLGKGAMKTVYKA--IDEVLG-VEVAWNQV-RLNELMRSPDDLQRLYSEVHLLSTLKH 88
+ V+GKG VY ID+ ++ A + R+ E+ + ++ E L+ L H
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQ----VEAFLREGLLMRGLNH 81
Query: 89 DSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLH 148
+++ + + + M L+ R R ++ + S+ Q+ +G+ YL
Sbjct: 82 PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA 141
Query: 149 SRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAIL------RGSKSAHSVIGTPEFMAP 202
+ +HRDL N ++ VK+ D GLA + + H+ +
Sbjct: 142 EQK--FVHRDLAARNCMLDESF-TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 203 ELYEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGK 249
L + DV+SFG+ + E+ T P +P + + G+
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR 245
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 31 LFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNE-LMRSPDDLQRLYSE-----VHLLS 84
+F E LG+G ++K + +G + Q+ E L++ D R YSE ++S
Sbjct: 11 IFNESLGQGTFTKIFKGVRREVG---DYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 85 TLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRR-VDIRAIKSWARQILQG 143
L H ++ Y D+ + E G+L Y KK + ++I A+Q+
Sbjct: 68 KLSHKHLVLNYGVCFCGDENI--LVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA 125
Query: 144 LVYLHSRDPPVIHRDLKCDNIFV-------NGHLGQVKIGDLGLAAILRGSKSAHSVIGT 196
+ +L +IH ++ NI + G+ +K+ D G++ + I
Sbjct: 126 MHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI-- 181
Query: 197 PEFMAPELYE--EDYNELVDVYSFGMCVLEMFT 227
++ PE E ++ N D +SFG + E+ +
Sbjct: 182 -PWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 128 VDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHL-GQVKIGDLGLAAILRG 186
VD +A + +G+ +LH+ +P + L ++ ++ + ++ + D+ + G
Sbjct: 108 VDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPG 167
Query: 187 SKSAHSVIGTPEFMAPELYE---EDYNEL-VDVYSFGMCVLEMFTCEYPYSECAN 237
A P ++APE + ED N D++SF + + E+ T E P+++ +N
Sbjct: 168 RMYA------PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN 216
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 32/160 (20%)
Query: 26 NGRYGLFEEVLGKGAMKTVYKAIDEVLG---------------VEVAWNQVRLNELMRS- 69
NGRY + + LG G TV+ + D + G E A +++RL + +R+
Sbjct: 36 NGRYHVIRK-LGWGHFSTVWLSWD-IQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNS 93
Query: 70 -PDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREY-RKKYRR 127
P+D R V LL K V+ + E+ L+ + Y+
Sbjct: 94 DPNDPNREMV-VQLLDDFKISG----------VNGTHICMVFEVLGHHLLKWIIKSNYQG 142
Query: 128 VDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVN 167
+ + +K +Q+LQGL YLH++ +IH D+K +NI ++
Sbjct: 143 LPLPCVKKIIQQVLQGLDYLHTK-CRIIHTDIKPENILLS 181
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 32/160 (20%)
Query: 26 NGRYGLFEEVLGKGAMKTVYKAIDEVLG---------------VEVAWNQVRLNELMRS- 69
NGRY + + LG G TV+ + D + G E A +++RL + +R+
Sbjct: 20 NGRYHVIRK-LGWGHFSTVWLSWD-IQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNS 77
Query: 70 -PDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREY-RKKYRR 127
P+D R V LL K V+ + E+ L+ + Y+
Sbjct: 78 DPNDPNREMV-VQLLDDFKISG----------VNGTHICMVFEVLGHHLLKWIIKSNYQG 126
Query: 128 VDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVN 167
+ + +K +Q+LQGL YLH++ +IH D+K +NI ++
Sbjct: 127 LPLPCVKKIIQQVLQGLDYLHTK-CRIIHTDIKPENILLS 165
>pdb|1GO3|E Chain E, Structure Of An Archeal Homolog Of The Eukaryotic Rna
Polymerase Ii Rpb4RPB7 COMPLEX
pdb|1GO3|M Chain M, Structure Of An Archeal Homolog Of The Eukaryotic Rna
Polymerase Ii Rpb4RPB7 COMPLEX
Length = 187
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 50/134 (37%), Gaps = 16/134 (11%)
Query: 170 LGQVKIGDLGLAAILRGSKSA-HSVIGTPEFMAPELYEEDYNELVDVYSFGMCVLEMFTC 228
L V + D+G ++ G SA H V+ PE+YE E+VDV FG F
Sbjct: 46 LSIVDVKDIGEGKVVHGDGSAYHPVVFETLVYIPEMYELIEGEVVDVVEFG-----SFVR 100
Query: 229 EYPYSECANPAQIYKKVTS---------GKLPGAFYSIQDLEAQRFIGRCLVNASKRLSA 279
P + +QI S GK G I D R + L KR S
Sbjct: 101 LGPLDGLIHVSQIMDDYVSYDPKREAIIGKETGKVLEIGDYVRARIVAISLKAERKRGSK 160
Query: 280 KELLL-DPFLASDE 292
L + P+L E
Sbjct: 161 IALTMRQPYLGKLE 174
>pdb|3GXB|A Chain A, Crystal Structure Of Vwf A2 Domain
pdb|3GXB|B Chain B, Crystal Structure Of Vwf A2 Domain
Length = 184
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 178 LGLAAILRGSKSAHSVIGTPEFMAPELYEEDYNELVDVY--SFGMCVLE---MFTCEYPY 232
L +A +L GS IG +F + + E+ + +DV S + VL+ M T EYP+
Sbjct: 3 LDVAFVLEGSDK----IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPF 58
Query: 233 SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIG--RCLVNASKRLSAKEL--LLDPFL 288
SE + I ++V + G + L A R++ LV+ R A L ++
Sbjct: 59 SEAQSKGDILQRVREIRYQGGNRTNTGL-ALRYLSDHSFLVSQGDREQAPNLVYMVTGNP 117
Query: 289 ASDEVKLLSK----TKLNQKPFLNETELEKLQLSDDP 321
ASDE+K L + P N ELE++ + P
Sbjct: 118 ASDEIKRLPGDIQVVPIGVGPNANVQELERIGWPNAP 154
>pdb|3PPW|A Chain A, Crystal Structure Of The D1596a Mutant Of An Engineered
Vwf A2 Domain (N1493c And C1670s)
Length = 196
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 178 LGLAAILRGSKSAHSVIGTPEFMAPELYEEDYNELVDVY--SFGMCVLE---MFTCEYPY 232
L +A +L GS IG +F + + E+ + +DV S + VL+ M T EYP+
Sbjct: 11 LDVAFVLEGSDK----IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPF 66
Query: 233 SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIG--RCLVNASKRLSAKEL--LLDPFL 288
SE + I ++V + G + L A R++ LV+ R A L ++
Sbjct: 67 SEAQSKGDILQRVREIRYQGGNRTNTGL-ALRYLSDHSFLVSQGAREQAPNLVYMVTGNP 125
Query: 289 ASDEVKLLSK----TKLNQKPFLNETELEKLQLSDDP 321
ASDE+K L + P N ELE++ + P
Sbjct: 126 ASDEIKRLPGDIQVVPIGVGPNANVQELERIGWPNAP 162
>pdb|3PPV|A Chain A, Crystal Structure Of An Engineered Vwf A2 Domain (N1493c
And C1670s)
Length = 196
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 178 LGLAAILRGSKSAHSVIGTPEFMAPELYEEDYNELVDVY--SFGMCVLE---MFTCEYPY 232
L +A +L GS IG +F + + E+ + +DV S + VL+ M T EYP+
Sbjct: 11 LDVAFVLEGSDK----IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPF 66
Query: 233 SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIG--RCLVNASKRLSAKEL--LLDPFL 288
SE + I ++V + G + L A R++ LV+ R A L ++
Sbjct: 67 SEAQSKGDILQRVREIRYQGGNRTNTGL-ALRYLSDHSFLVSQGDREQAPNLVYMVTGNP 125
Query: 289 ASDEVKLLSK----TKLNQKPFLNETELEKLQLSDDP 321
ASDE+K L + P N ELE++ + P
Sbjct: 126 ASDEIKRLPGDIQVVPIGVGPNANVQELERIGWPNAP 162
>pdb|3PPY|A Chain A, Crystal Structure Of The D1596aN1602A DOUBLE MUTANT OF AN
ENGINEERED Vwf A2 Domain (N1493c And C1670s)
Length = 196
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 178 LGLAAILRGSKSAHSVIGTPEFMAPELYEEDYNELVDVY--SFGMCVLE---MFTCEYPY 232
L +A +L GS IG +F + + E+ + +DV S + VL+ M T EYP+
Sbjct: 11 LDVAFVLEGSDK----IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPF 66
Query: 233 SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIG--RCLVNASKRLSAKEL--LLDPFL 288
SE + I ++V + G + L A R++ LV+ R A L ++
Sbjct: 67 SEAQSKGDILQRVREIRYQGGNRTNTGL-ALRYLSDHSFLVSQGAREQAPALVYMVTGNP 125
Query: 289 ASDEVKLLSK----TKLNQKPFLNETELEKLQLSDDP 321
ASDE+K L + P N ELE++ + P
Sbjct: 126 ASDEIKRLPGDIQVVPIGVGPNANVQELERIGWPNAP 162
>pdb|3PPX|A Chain A, Crystal Structure Of The N1602a Mutant Of An Engineered
Vwf A2 Domain (N1493c And C1670s)
Length = 196
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 178 LGLAAILRGSKSAHSVIGTPEFMAPELYEEDYNELVDVY--SFGMCVLE---MFTCEYPY 232
L +A +L GS IG +F + + E+ + +DV S + VL+ M T EYP+
Sbjct: 11 LDVAFVLEGSDK----IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPF 66
Query: 233 SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIG--RCLVNASKRLSAKEL--LLDPFL 288
SE + I ++V + G + L A R++ LV+ R A L ++
Sbjct: 67 SEAQSKGDILQRVREIRYQGGNRTNTGL-ALRYLSDHSFLVSQGDREQAPALVYMVTGNP 125
Query: 289 ASDEVKLLSK----TKLNQKPFLNETELEKLQLSDDP 321
ASDE+K L + P N ELE++ + P
Sbjct: 126 ASDEIKRLPGDIQVVPIGVGPNANVQELERIGWPNAP 162
>pdb|3ZQK|A Chain A, Von Willebrand Factor A2 Domain With Calcium
pdb|3ZQK|B Chain B, Von Willebrand Factor A2 Domain With Calcium
pdb|3ZQK|C Chain C, Von Willebrand Factor A2 Domain With Calcium
Length = 199
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 178 LGLAAILRGSKSAHSVIGTPEFMAPELYEEDYNELVDVY--SFGMCVLE---MFTCEYPY 232
L +A +L GS IG +F + + E+ + +DV S + VL+ M T EYP+
Sbjct: 22 LDVAFVLEGSDK----IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPF 77
Query: 233 SECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIG--RCLVNASKRLSAKEL--LLDPFL 288
SE + I +++ + G + L A R++ LV+ R A L ++
Sbjct: 78 SEAQSKGDILQRLREIRYQGGNRTNTGL-ALRYLSDHSFLVSQGDREQAPNLVYMVTGNP 136
Query: 289 ASDEVKLLSK----TKLNQKPFLNETELEKLQLSDDP 321
ASDE+K L + P N ELE++ + P
Sbjct: 137 ASDEIKRLPGDIQVVPIGVGPNANVQELERIGWPNAP 173
>pdb|2LRU|A Chain A, Solution Structure Of The Wnk1 Autoinhibitory Domain
Length = 98
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 355 IYFPFDILNDTPLDVAREMVKELEITDWEPFEIAKMIDEEISVLVPHWKKR 405
I F FD+ D P DVA+EMV+ + + + +AK I + +S++ ++R
Sbjct: 48 IEFSFDLERDVPEDVAQEMVESGYVCEGDHKTMAKAIKDRVSLIKRKREQR 98
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 128 VDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVN-GHLGQVKIGDLGLAAILRG 186
VD +A +G +LH+ +P + L ++ ++ ++ D+ + G
Sbjct: 108 VDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPG 167
Query: 187 SKSAHSVIGTPEFMAPELYE---EDYNEL-VDVYSFGMCVLEMFTCEYPYSECAN 237
A P ++APE + ED N D +SF + + E+ T E P+++ +N
Sbjct: 168 RXYA------PAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSN 216
>pdb|4GZ9|A Chain A, Mouse Neuropilin-1, Extracellular Domains 1-4 (A1a2b1b2)
pdb|4GZA|H Chain H, Complex Of Mouse Plexin A2 - Semaphorin 3a - Neuropilin-1
Length = 577
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 95 YTSWIDVDQKTFNFITEMFTSGTL-REYRKKY----RRVDIRA 132
Y WI VD F+T + T G + +E +KKY RVDI +
Sbjct: 304 YKEWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYRVDISS 346
>pdb|2ORX|A Chain A, Structural Basis For Ligand Binding And Heparin Mediated
Activation Of Neuropilin
pdb|2ORZ|A Chain A, Structural Basis For Ligand Binding And Heparin Mediated
Activation Of Neuropilin
Length = 314
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 95 YTSWIDVDQKTFNFITEMFTSGTL-REYRKKY----RRVDIRA 132
Y WI VD F+T + T G + +E +KKY RVDI +
Sbjct: 50 YREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYRVDISS 92
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,040,967
Number of Sequences: 62578
Number of extensions: 658267
Number of successful extensions: 3530
Number of sequences better than 100.0: 945
Number of HSP's better than 100.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 747
Number of HSP's that attempted gapping in prelim test: 2203
Number of HSP's gapped (non-prelim): 994
length of query: 467
length of database: 14,973,337
effective HSP length: 102
effective length of query: 365
effective length of database: 8,590,381
effective search space: 3135489065
effective search space used: 3135489065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)