BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012261
(467 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296089272|emb|CBI39044.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust.
Identities = 303/403 (75%), Positives = 345/403 (85%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI++L+DIVPAE GD+FLSMLP WH YERA YFIF+ GIE +YT V NLK+DL+RYQP
Sbjct: 300 QIKNLWDIVPAEPGDRFLSMLPSWHAYERASEYFIFTHGIEQVYTTVPNLKEDLRRYQPQ 359
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLVYETLYSGIQKQI TSS R++VA IRIS AY KRIYEG L ++QKQ
Sbjct: 360 YLISVPLVYETLYSGIQKQISTSSTVRKLVALTFIRISLAYMELKRIYEGKFLQKSQKQY 419
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
SY+ ++ DWLWA+II AILWP+H+L +KLVY KI SAIGISKAGVSGGGSLP H+D F+E
Sbjct: 420 SYIASIFDWLWAKIIAAILWPVHMLGKKLVYSKIHSAIGISKAGVSGGGSLPSHVDRFFE 479
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AI +KVQ GYGLTE SPV AARRPTCNVLGSVGHPI HTEIKIVD+ET+E+LP GSKGIV
Sbjct: 480 AIDIKVQNGYGLTECSPVTAARRPTCNVLGSVGHPIRHTEIKIVDSETDELLPPGSKGIV 539
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KV+G VM+GY+KN ATK+ LDEDGWLNTGDIGWIAPHHS GRSR CGGV+VLEGRAKD
Sbjct: 540 KVKGPHVMKGYYKNELATKKVLDEDGWLNTGDIGWIAPHHSVGRSRHCGGVIVLEGRAKD 599
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEP ELEEAA+RS+LI+QIVVIGQDQRR GAIIVP+KEEVL AAKRLSI++
Sbjct: 600 TIVLSTGENVEPTELEEAAMRSTLIQQIVVIGQDQRRLGAIIVPNKEEVLAAAKRLSILN 659
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
A+ SELSKEK LL+ E+R WT SFQIGPI VVDEPFT++
Sbjct: 660 ANTSELSKEKITGLLHEEIRTWTEGFSFQIGPILVVDEPFTID 702
>gi|225439252|ref|XP_002263501.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like [Vitis
vinifera]
Length = 691
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 303/403 (75%), Positives = 345/403 (85%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI++L+DIVPAE GD+FLSMLP WH YERA YFIF+ GIE +YT V NLK+DL+RYQP
Sbjct: 261 QIKNLWDIVPAEPGDRFLSMLPSWHAYERASEYFIFTHGIEQVYTTVPNLKEDLRRYQPQ 320
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLVYETLYSGIQKQI TSS R++VA IRIS AY KRIYEG L ++QKQ
Sbjct: 321 YLISVPLVYETLYSGIQKQISTSSTVRKLVALTFIRISLAYMELKRIYEGKFLQKSQKQY 380
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
SY+ ++ DWLWA+II AILWP+H+L +KLVY KI SAIGISKAGVSGGGSLP H+D F+E
Sbjct: 381 SYIASIFDWLWAKIIAAILWPVHMLGKKLVYSKIHSAIGISKAGVSGGGSLPSHVDRFFE 440
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AI +KVQ GYGLTE SPV AARRPTCNVLGSVGHPI HTEIKIVD+ET+E+LP GSKGIV
Sbjct: 441 AIDIKVQNGYGLTECSPVTAARRPTCNVLGSVGHPIRHTEIKIVDSETDELLPPGSKGIV 500
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KV+G VM+GY+KN ATK+ LDEDGWLNTGDIGWIAPHHS GRSR CGGV+VLEGRAKD
Sbjct: 501 KVKGPHVMKGYYKNELATKKVLDEDGWLNTGDIGWIAPHHSVGRSRHCGGVIVLEGRAKD 560
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEP ELEEAA+RS+LI+QIVVIGQDQRR GAIIVP+KEEVL AAKRLSI++
Sbjct: 561 TIVLSTGENVEPTELEEAAMRSTLIQQIVVIGQDQRRLGAIIVPNKEEVLAAAKRLSILN 620
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
A+ SELSKEK LL+ E+R WT SFQIGPI VVDEPFT++
Sbjct: 621 ANTSELSKEKITGLLHEEIRTWTEGFSFQIGPILVVDEPFTID 663
>gi|224129204|ref|XP_002328916.1| predicted protein [Populus trichocarpa]
gi|222839346|gb|EEE77683.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 298/403 (73%), Positives = 346/403 (85%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L+D+VPA+ D+FLSMLPPWH YERA YFIF+ G E +YT VRNLK DLQ+YQPH
Sbjct: 276 QINNLWDVVPAQPADRFLSMLPPWHAYERAAEYFIFTHGTEQVYTTVRNLKVDLQQYQPH 335
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+I+VPLV+ETLYSGIQKQ+ TSSA R+++A I+IS Y KRIYEG L R++K+P
Sbjct: 336 YLITVPLVFETLYSGIQKQLSTSSALRKILAFMFIKISLTYMEMKRIYEGTYLVRSRKEP 395
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
Y V+++DWLWARII AIL P+H+LA+KLVY KI SAIGISKAGVSGGGSLP H+D F+E
Sbjct: 396 PYFVSMLDWLWARIIAAILLPVHMLAKKLVYSKIHSAIGISKAGVSGGGSLPSHVDKFFE 455
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGV VQ GYG+TESSPV AARRP+ NVLGS+G PI HTE KIVDAET E LP GSKGIV
Sbjct: 456 AIGVVVQNGYGMTESSPVTAARRPSNNVLGSIGLPIRHTEFKIVDAETGEALPHGSKGIV 515
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG QVM+GY+KNP ATKQA+DEDGWLN+GDIGWIAP+HSRGRSR CGGV+VLEGRAKD
Sbjct: 516 KVRGPQVMKGYYKNPLATKQAVDEDGWLNSGDIGWIAPYHSRGRSRHCGGVIVLEGRAKD 575
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVL TGENVEPLELEEAA+RSSLI+QIVVIGQDQRR GAI+VP+K+EVL AAK+ SIV
Sbjct: 576 TIVLLTGENVEPLELEEAAMRSSLIQQIVVIGQDQRRLGAIVVPNKDEVLEAAKKWSIVD 635
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
DA+ELSK++ SLL ELRKWTS CSFQIGPI V+DEPFT++
Sbjct: 636 PDATELSKKQITSLLNEELRKWTSGCSFQIGPILVIDEPFTID 678
>gi|356512427|ref|XP_003524920.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Glycine max]
Length = 733
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 293/403 (72%), Positives = 345/403 (85%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI++L+DIVPAE GD+FLSMLPPWH YERAC YFIF+ GIE +YT VRNLKDDLQRYQP
Sbjct: 303 QIKNLWDIVPAEAGDRFLSMLPPWHAYERACEYFIFTCGIEQVYTTVRNLKDDLQRYQPQ 362
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLV+ETLYSGI KQI T S R++VA IR S AY +KRIYEG CLT+N+KQ
Sbjct: 363 YLISVPLVFETLYSGIMKQISTGSVVRKLVALTFIRSSIAYMEYKRIYEGKCLTKNKKQA 422
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
SY +++DWLWAR I IL PLH+LA+KLVY KI SAIGISKAG+SGGGSLP +D F+E
Sbjct: 423 SYAYSMLDWLWARTIATILLPLHILAKKLVYSKIHSAIGISKAGISGGGSLPWEVDKFFE 482
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGVKVQ GYGLTE+SPVIAARRP CNV+GSVGHPI HTE KIVD+ET+EVLP GSKGI+
Sbjct: 483 AIGVKVQNGYGLTETSPVIAARRPRCNVIGSVGHPIRHTEFKIVDSETDEVLPPGSKGIL 542
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG QVM+GYFKN AT QALD DGWLNTGDIGWI PHHS GRSR GV+V+EGRAKD
Sbjct: 543 KVRGPQVMEGYFKNSLATNQALDGDGWLNTGDIGWIVPHHSTGRSRNSSGVIVVEGRAKD 602
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEPLELEEAA+RSS+I+QIVV+GQD+RR GA+IVP+KEEVL A++LSI+
Sbjct: 603 TIVLSTGENVEPLELEEAAMRSSIIQQIVVVGQDKRRLGAVIVPNKEEVLKVARKLSIID 662
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
+++S++S+EK SL+Y EL+ WTS+ FQIGPI +V+EPFT++
Sbjct: 663 SNSSDVSEEKVTSLIYKELKTWTSESPFQIGPILLVNEPFTID 705
>gi|22331297|ref|NP_189021.2| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
gi|75311239|sp|Q9LK39.1|AAE16_ARATH RecName: Full=Probable acyl-activating enzyme 16, chloroplastic;
Flags: Precursor
gi|9293952|dbj|BAB01855.1| long-chain-fatty-acid CoA ligase [Arabidopsis thaliana]
gi|332643293|gb|AEE76814.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
Length = 722
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/404 (71%), Positives = 344/404 (85%), Gaps = 1/404 (0%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QIR+L D VPAE G++FLSMLP WH YERAC YFIF+ G+E YT++R LKDDL+RYQPH
Sbjct: 291 QIRNLSDFVPAEAGERFLSMLPSWHAYERACEYFIFTCGVEQKYTSIRFLKDDLKRYQPH 350
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLVYETLYSGIQKQI SS AR+ +A LI++S AYT KR+YEG CLT+NQK P
Sbjct: 351 YLISVPLVYETLYSGIQKQISASSPARKFLALTLIKVSLAYTEMKRVYEGLCLTKNQKPP 410
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
Y+V+L+DWLWAR++ LWPLH+LAEKLV++KI+S+IGI+KAGVSGGGSLPMH+D F+E
Sbjct: 411 MYIVSLVDWLWARVVAFFLWPLHMLAEKLVHRKIRSSIGITKAGVSGGGSLPMHVDKFFE 470
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGV VQ GYGLTE+SPV++ARR CNVLGSVGHPI TE KIVD ET VLP GSKGIV
Sbjct: 471 AIGVNVQNGYGLTETSPVVSARRLRCNVLGSVGHPIKDTEFKIVDHETGTVLPPGSKGIV 530
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG VM+GY+KNP ATKQ +D+DGW NTGD+GWI P HS GRSR CGGV+VLEGRAKD
Sbjct: 531 KVRGPPVMKGYYKNPLATKQVIDDDGWFNTGDMGWITPQHSTGRSRSCGGVIVLEGRAKD 590
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK-RLSIV 417
TIVLSTGENVEPLE+EEAA+RS+LI+QIVVIGQDQRR GAI++P+KE AAK ++S V
Sbjct: 591 TIVLSTGENVEPLEIEEAAMRSNLIQQIVVIGQDQRRLGAIVIPNKEAAEGAAKQKISPV 650
Query: 418 HADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
++ +ELSKE S++Y ELRKWTS+CSFQ+GP+ +VDEPFT++
Sbjct: 651 DSEVNELSKETITSMVYEELRKWTSQCSFQVGPVLIVDEPFTID 694
>gi|20799733|gb|AAM28629.1|AF503771_1 acyl-CoA synthetase-like protein [Arabidopsis thaliana]
Length = 722
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/404 (71%), Positives = 344/404 (85%), Gaps = 1/404 (0%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QIR+L D VPAE G++FLSMLP WH YERAC YFIF+ G+E YT++R LKDDL+RYQPH
Sbjct: 291 QIRNLSDFVPAEAGERFLSMLPSWHAYERACEYFIFTCGVEQKYTSIRFLKDDLKRYQPH 350
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLVYETLYSGIQKQI SS AR+ +A LI++S AYT KR+YEG CLT+NQK P
Sbjct: 351 YLISVPLVYETLYSGIQKQISASSPARKFLALTLIKVSLAYTEMKRVYEGLCLTKNQKPP 410
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
Y+V+L+DWLWAR++ LWPLH+LAEKLV++KI+S+IGI+KAGVSGGGSLPMH+D F+E
Sbjct: 411 MYIVSLVDWLWARVVAFFLWPLHMLAEKLVHRKIRSSIGITKAGVSGGGSLPMHVDKFFE 470
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGV VQ GYGLTE+SPV++ARR CNVLGSVGHPI TE KIVD ET VLP GSKGIV
Sbjct: 471 AIGVNVQNGYGLTETSPVVSARRLRCNVLGSVGHPIKDTEFKIVDHETGTVLPPGSKGIV 530
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG VM+GY+KNP ATKQ +D+DGW NTGD+GWI P HS GRSR CGGV+VLEGRAKD
Sbjct: 531 KVRGPPVMKGYYKNPLATKQVIDDDGWFNTGDMGWITPQHSTGRSRSCGGVIVLEGRAKD 590
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK-RLSIV 417
TIVLSTGENVEPLE+EEAA+RS+LI+QIVVIGQDQRR GAI++P+KE AAK ++S V
Sbjct: 591 TIVLSTGENVEPLEIEEAAMRSNLIQQIVVIGQDQRRLGAIVIPNKEAAEGAAKQKISPV 650
Query: 418 HADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
++ +ELSKE S++Y ELRKWTS+CSFQ+GP+ +VDEPFT++
Sbjct: 651 DSEVNELSKETITSMVYEELRKWTSQCSFQVGPVLIVDEPFTID 694
>gi|297835432|ref|XP_002885598.1| hypothetical protein ARALYDRAFT_898924 [Arabidopsis lyrata subsp.
lyrata]
gi|297331438|gb|EFH61857.1| hypothetical protein ARALYDRAFT_898924 [Arabidopsis lyrata subsp.
lyrata]
Length = 722
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 285/404 (70%), Positives = 343/404 (84%), Gaps = 1/404 (0%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QIR+L D VPAE G++FLSMLP WH YERAC YFIF+ G+E YT++R LK DL++YQPH
Sbjct: 291 QIRNLSDFVPAEAGERFLSMLPSWHAYERACEYFIFTCGVEQKYTSIRFLKGDLKQYQPH 350
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLVYETLYSGIQKQI TSS R+ +A LI++S AYT KRIYEG CLT+NQK P
Sbjct: 351 YLISVPLVYETLYSGIQKQISTSSPVRKFLALTLIKVSLAYTEMKRIYEGLCLTKNQKPP 410
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
Y+V+L+DWLWAR++ +LWPLH+LAEKLV+KKI+S+IGI+KAGVSGGGSLPMH+D F+E
Sbjct: 411 LYIVSLVDWLWARVVAFVLWPLHILAEKLVHKKIRSSIGITKAGVSGGGSLPMHVDKFFE 470
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AI V VQ GYGLTE+SPV++ARR CNVLGSVGHPI TE KIVD ET VLP GSKGIV
Sbjct: 471 AISVNVQNGYGLTETSPVVSARRLRCNVLGSVGHPIKDTEFKIVDHETGTVLPPGSKGIV 530
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG VM+GY+KNP ATKQ +D+DGW NTGD+GWI P HS GRSR CGGV+VLEGRAKD
Sbjct: 531 KVRGPPVMKGYYKNPLATKQVIDDDGWFNTGDMGWITPQHSTGRSRSCGGVIVLEGRAKD 590
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK-RLSIV 417
TIVLSTGENVEPLE+EEAA+RS+LI+QIVVIGQDQRR GAI++P+KE AAK ++S V
Sbjct: 591 TIVLSTGENVEPLEIEEAAMRSNLIQQIVVIGQDQRRLGAIVIPNKEAAEGAAKQKISPV 650
Query: 418 HADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
+ +ELSKE+ S++Y EL+KWTS+CSFQ+GP+ +VDEPFT++
Sbjct: 651 DPEVNELSKERITSMVYEELKKWTSQCSFQVGPVLIVDEPFTID 694
>gi|224055821|ref|XP_002298670.1| predicted protein [Populus trichocarpa]
gi|222845928|gb|EEE83475.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 289/403 (71%), Positives = 342/403 (84%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI + ++IVPA+ D+FLSMLPPWH YERAC YFIF+ G E +YT VRN K DLQ+YQPH
Sbjct: 264 QINNFWEIVPAQPADRFLSMLPPWHAYERACEYFIFANGAEQVYTTVRNFKVDLQQYQPH 323
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLV+ETLYSGIQKQI SS R+++A I+IS AY KRIYEG LTR+Q +
Sbjct: 324 YLISVPLVFETLYSGIQKQISKSSTLRKLLAFTFIKISLAYMEMKRIYEGTYLTRSQNEQ 383
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
SY V+++ WL ARI AIL P+H+LAEKLVY KIQSAIGI KAGVSGGGSLP H+D F+E
Sbjct: 384 SYFVSILGWLRARIFAAILLPVHMLAEKLVYSKIQSAIGIRKAGVSGGGSLPAHVDKFFE 443
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGV + GYG+TESSPV+AAR+ + NVLGSVGHPI HTE KIVDAET + LP GSKGIV
Sbjct: 444 AIGVVLLNGYGMTESSPVLAARQLSNNVLGSVGHPIRHTEFKIVDAETGKSLPYGSKGIV 503
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+VRG QVM+GY+KNP ATKQA+DEDGWLNTGD+GWIAP+HSRG+S RCGG++VLEGRAKD
Sbjct: 504 RVRGPQVMKGYYKNPLATKQAVDEDGWLNTGDLGWIAPYHSRGKSCRCGGIIVLEGRAKD 563
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEPLELEEAA++SSLI+QIVVIGQDQRR GAI+VP+KEEVL AK+LSIV
Sbjct: 564 TIVLSTGENVEPLELEEAAMKSSLIQQIVVIGQDQRRLGAIVVPNKEEVLEVAKKLSIVD 623
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
ADA+ELSK++ +LL ELRKWTS+ SFQIGP+ V+DE FT++
Sbjct: 624 ADATELSKKQIANLLDKELRKWTSEASFQIGPVLVIDESFTID 666
>gi|449527657|ref|XP_004170826.1| PREDICTED: probable acyl-activating enzyme 16, chloroplastic-like,
partial [Cucumis sativus]
Length = 672
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 278/403 (68%), Positives = 340/403 (84%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI++L+DIVPA+ GDKFLSMLPPWH YERAC YFIF+ G+E YT +RNLKDDL+ YQP
Sbjct: 242 QIKNLWDIVPAKVGDKFLSMLPPWHAYERACEYFIFTFGVEQAYTTIRNLKDDLRHYQPD 301
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLVYETLYSGIQKQI SS R+++ A I +S AY KRIYEG LTR+ QP
Sbjct: 302 YLISVPLVYETLYSGIQKQILASSNLRKLIVLAFINVSLAYMELKRIYEGTYLTRSNVQP 361
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
++LV+ +DWL+AR+ +ILWP+H+LA+ +VY K+QSAIGI KAG+SGGGSLP H+DLF+E
Sbjct: 362 THLVSALDWLFARMTASILWPIHMLAKIIVYSKVQSAIGIWKAGISGGGSLPSHVDLFFE 421
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIG+ VQ GYGLTE SPV+AARRPTCNVLGSVGHPI HTE +IVD ET + LP GS+GIV
Sbjct: 422 AIGITVQNGYGLTECSPVVAARRPTCNVLGSVGHPIRHTEFRIVDMETGDALPPGSRGIV 481
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+VRG QVM+GY+KN SAT+Q LD++GW ++GDIGWIAPHHSRGRSRRCGGV+VL+GRAKD
Sbjct: 482 EVRGPQVMKGYYKNSSATQQVLDKEGWFSSGDIGWIAPHHSRGRSRRCGGVIVLDGRAKD 541
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVL TGENVEP +EEAA+RS+LI+QIVVIGQDQRR GAI+ P+KEEVL AAK+LS
Sbjct: 542 TIVLLTGENVEPTVIEEAAMRSTLIQQIVVIGQDQRRLGAIVFPNKEEVLSAAKKLSAED 601
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
+ S++S E +L+Y E+RKWTS+C FQIGPI +V+EPFT++
Sbjct: 602 SSTSDVSNETLTNLIYSEVRKWTSECPFQIGPILIVNEPFTID 644
>gi|449441378|ref|XP_004138459.1| PREDICTED: probable acyl-activating enzyme 16, chloroplastic-like
[Cucumis sativus]
Length = 731
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 278/403 (68%), Positives = 340/403 (84%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI++L+DIVPA+ GDKFLSMLPPWH YERAC YFIF+ G+E YT +RNLKDDL+ YQP
Sbjct: 301 QIKNLWDIVPAKVGDKFLSMLPPWHAYERACEYFIFTFGVEQAYTTIRNLKDDLRHYQPD 360
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLVYETLYSGIQKQI SS R+++ A I +S AY KRIYEG LTR+ QP
Sbjct: 361 YLISVPLVYETLYSGIQKQILASSNLRKLIVLAFINVSLAYMELKRIYEGTYLTRSNVQP 420
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
++LV+ +DWL+AR+ +ILWP+H+LA+ +VY K+QSAIGI KAG+SGGGSLP H+DLF+E
Sbjct: 421 THLVSALDWLFARMTASILWPIHMLAKIIVYSKVQSAIGIWKAGISGGGSLPSHVDLFFE 480
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIG+ VQ GYGLTE SPV+AARRPTCNVLGSVGHPI HTE +IVD ET + LP GS+GIV
Sbjct: 481 AIGITVQNGYGLTECSPVVAARRPTCNVLGSVGHPIRHTEFRIVDMETGDALPPGSRGIV 540
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+VRG QVM+GY+KN SAT+Q LD++GW ++GDIGWIAPHHSRGRSRRCGGV+VL+GRAKD
Sbjct: 541 EVRGPQVMKGYYKNSSATQQVLDKEGWFSSGDIGWIAPHHSRGRSRRCGGVIVLDGRAKD 600
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVL TGENVEP +EEAA+RS+LI+QIVVIGQDQRR GAI+ P+KEEVL AAK+LS
Sbjct: 601 TIVLLTGENVEPTVIEEAAMRSTLIQQIVVIGQDQRRLGAIVFPNKEEVLSAAKKLSAED 660
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
+ S++S E +L+Y E+RKWTS+C FQIGPI +V+EPFT++
Sbjct: 661 SSTSDVSNETLTNLIYSEVRKWTSECPFQIGPILIVNEPFTID 703
>gi|1617272|emb|CAA96521.1| AMP-binding protein [Brassica napus]
Length = 701
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 283/403 (70%), Positives = 340/403 (84%), Gaps = 7/403 (1%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI+ L VPAE GD+FLSMLP WH YERAC YFIF+ G+E MYT++R LK+DL+RYQPH
Sbjct: 278 QIKHLSAYVPAEAGDRFLSMLPSWHAYERACEYFIFTCGVEQMYTSIRFLKEDLKRYQPH 337
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLVYETLYSGIQKQI TSSAAR+ +A LI+IS AY KRIYEG CLT+ QK P
Sbjct: 338 YLISVPLVYETLYSGIQKQISTSSAARKYLALTLIKISLAYMEMKRIYEGMCLTKEQKPP 397
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
Y+V+L+DWL AR++ A+LWPLH+LA+ L+YKKI ++IGISKAG+SGGGSLP+HID F+E
Sbjct: 398 MYIVSLVDWLRARVVAALLWPLHMLAKILIYKKIHASIGISKAGISGGGSLPIHIDKFFE 457
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGV +Q GYGLTE+SPVI AR +CNV+GS G+P++ TE KIVD ETN VLP GSKGIV
Sbjct: 458 AIGVILQNGYGLTETSPVICARTLSCNVIGSAGYPMHGTEFKIVDPETNTVLPPGSKGIV 517
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG Q+M+GY+KNP+ TKQ L+E GW NTGD+GWIAPHHS GRSRRCGG++VLEGRAKD
Sbjct: 518 KVRGPQIMKGYYKNPTTTKQVLNESGWFNTGDMGWIAPHHSTGRSRRCGGLIVLEGRAKD 577
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEPLE+EEAA+RS LI QIVVIGQDQRR GAII+P+KEE A++L
Sbjct: 578 TIVLSTGENVEPLEIEEAAMRSRLIDQIVVIGQDQRRLGAIIMPNKEE----AEKLD--- 630
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
+ S+LS EK SL+Y ELRKWTS+CSFQ+GP+ +VDEPFT++
Sbjct: 631 PETSQLSSEKLKSLVYQELRKWTSECSFQVGPVLIVDEPFTID 673
>gi|357462833|ref|XP_003601698.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355490746|gb|AES71949.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 512
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 280/404 (69%), Positives = 337/404 (83%), Gaps = 1/404 (0%)
Query: 59 QIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
QI+ L D+VP E GDKFLSMLPPWH YERAC Y +FSRG+E +YT VRNLKDDL RY+P
Sbjct: 81 QIKHLSDVVPTTEAGDKFLSMLPPWHAYERACEYLVFSRGLEHIYTTVRNLKDDLGRYKP 140
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
H M+SVPLV+ETLYSGI KQI TSS R++VA IR+S Y KRIYEG CLT+NQK
Sbjct: 141 HLMVSVPLVFETLYSGIMKQISTSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKNQKA 200
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFY 237
PSYL A++DWLWARI+ IL+P+H+LA KLVY KI+S IGIS A +SGGGSLP H+D F+
Sbjct: 201 PSYLYAMLDWLWARIMATILYPVHMLANKLVYSKIRSTIGISTAAISGGGSLPSHVDKFF 260
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
EAIG+ +Q GYGLTE+SPVIAARR C+V+GSVG+P+ HTE K+VD+ET EVLP GSKGI
Sbjct: 261 EAIGLNLQNGYGLTETSPVIAARRLGCDVIGSVGYPLKHTEFKVVDSETGEVLPPGSKGI 320
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
+KVRG Q+M+GY+KNP AT + +D DGWLNTGDIGWIA HHS GRSR GGV+V+EGRAK
Sbjct: 321 LKVRGPQLMKGYYKNPLATNRVIDSDGWLNTGDIGWIAAHHSTGRSRNSGGVIVVEGRAK 380
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVLS+GENVEP ELEEAA RS+LI+QIVVIGQD+RR GAIIVP+KEEVL AAK LSI+
Sbjct: 381 DTIVLSSGENVEPGELEEAATRSNLIQQIVVIGQDKRRLGAIIVPNKEEVLKAAKELSII 440
Query: 418 HADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
+++S++S+EK SL+Y ELR WTS FQIGPI +V++PFT++
Sbjct: 441 DSNSSDVSQEKVTSLIYNELRTWTSGFPFQIGPILLVNDPFTID 484
>gi|357462831|ref|XP_003601697.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355490745|gb|AES71948.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 720
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 280/404 (69%), Positives = 337/404 (83%), Gaps = 1/404 (0%)
Query: 59 QIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
QI+ L D+VP E GDKFLSMLPPWH YERAC Y +FSRG+E +YT VRNLKDDL RY+P
Sbjct: 289 QIKHLSDVVPTTEAGDKFLSMLPPWHAYERACEYLVFSRGLEHIYTTVRNLKDDLGRYKP 348
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
H M+SVPLV+ETLYSGI KQI TSS R++VA IR+S Y KRIYEG CLT+NQK
Sbjct: 349 HLMVSVPLVFETLYSGIMKQISTSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKNQKA 408
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFY 237
PSYL A++DWLWARI+ IL+P+H+LA KLVY KI+S IGIS A +SGGGSLP H+D F+
Sbjct: 409 PSYLYAMLDWLWARIMATILYPVHMLANKLVYSKIRSTIGISTAAISGGGSLPSHVDKFF 468
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
EAIG+ +Q GYGLTE+SPVIAARR C+V+GSVG+P+ HTE K+VD+ET EVLP GSKGI
Sbjct: 469 EAIGLNLQNGYGLTETSPVIAARRLGCDVIGSVGYPLKHTEFKVVDSETGEVLPPGSKGI 528
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
+KVRG Q+M+GY+KNP AT + +D DGWLNTGDIGWIA HHS GRSR GGV+V+EGRAK
Sbjct: 529 LKVRGPQLMKGYYKNPLATNRVIDSDGWLNTGDIGWIAAHHSTGRSRNSGGVIVVEGRAK 588
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVLS+GENVEP ELEEAA RS+LI+QIVVIGQD+RR GAIIVP+KEEVL AAK LSI+
Sbjct: 589 DTIVLSSGENVEPGELEEAATRSNLIQQIVVIGQDKRRLGAIIVPNKEEVLKAAKELSII 648
Query: 418 HADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
+++S++S+EK SL+Y ELR WTS FQIGPI +V++PFT++
Sbjct: 649 DSNSSDVSQEKVTSLIYNELRTWTSGFPFQIGPILLVNDPFTID 692
>gi|2244763|emb|CAB10186.1| AMP-binding protein [Arabidopsis thaliana]
gi|7268112|emb|CAB78449.1| AMP-binding protein [Arabidopsis thaliana]
Length = 698
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 279/403 (69%), Positives = 334/403 (82%), Gaps = 10/403 (2%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI+ L VPA+ GDKFLSMLP WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+
Sbjct: 278 QIKHLSKYVPAQAGDKFLSMLPSWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPN 337
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y++SVPLVYETLYSGIQKQI SSA R+ +A LI++S AY KRIYEG CLT+ QK P
Sbjct: 338 YIVSVPLVYETLYSGIQKQISASSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPP 397
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
Y+VA +DWLWAR+I A+LWPLH+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+E
Sbjct: 398 MYIVAFVDWLWARVIAALLWPLHMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFE 457
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGV +Q GYGLTE+SPV+ AR +CNVLGS GHP++ TE KIVD ETN VLP GSKGI+
Sbjct: 458 AIGVILQNGYGLTETSPVVCARTLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGII 517
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG QVM+GY+KNPS TKQ L+E GW NTGD GWIAPHHS+GRSR CGGV+VLEGRAKD
Sbjct: 518 KVRGPQVMKGYYKNPSTTKQVLNESGWFNTGDTGWIAPHHSKGRSRHCGGVIVLEGRAKD 577
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEPLE+EEAA+RS +I QIVVIGQD+RR GAII+P+KEE A+R+
Sbjct: 578 TIVLSTGENVEPLEIEEAAMRSRVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD--- 630
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
E SKE SL+Y ELRKWTS+CSFQ+GP+ +VD+PFT++
Sbjct: 631 ---PETSKETLKSLVYQELRKWTSECSFQVGPVLIVDDPFTID 670
>gi|22328609|ref|NP_193143.2| long-chain acyl-CoA synthetase [Arabidopsis thaliana]
gi|75304726|sp|Q8W471.1|AAE15_ARATH RecName: Full=Long-chain-fatty-acid--[acyl-carrier-protein] ligase
AEE15, chloroplastic; AltName:
Full=Acyl-[acyl-carrier-protein] synthetase; AltName:
Full=Acyl-activating enzyme 15; Flags: Precursor
gi|17065456|gb|AAL32882.1| A6 anther-specific protein [Arabidopsis thaliana]
gi|34098785|gb|AAQ56775.1| At4g14070 [Arabidopsis thaliana]
gi|118420017|gb|ABK88270.1| chloroplast acyl ACP synthetase [Arabidopsis thaliana]
gi|332657967|gb|AEE83367.1| long-chain acyl-CoA synthetase [Arabidopsis thaliana]
Length = 727
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 279/403 (69%), Positives = 334/403 (82%), Gaps = 10/403 (2%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI+ L VPA+ GDKFLSMLP WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+
Sbjct: 307 QIKHLSKYVPAQAGDKFLSMLPSWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPN 366
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y++SVPLVYETLYSGIQKQI SSA R+ +A LI++S AY KRIYEG CLT+ QK P
Sbjct: 367 YIVSVPLVYETLYSGIQKQISASSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPP 426
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
Y+VA +DWLWAR+I A+LWPLH+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+E
Sbjct: 427 MYIVAFVDWLWARVIAALLWPLHMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFE 486
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGV +Q GYGLTE+SPV+ AR +CNVLGS GHP++ TE KIVD ETN VLP GSKGI+
Sbjct: 487 AIGVILQNGYGLTETSPVVCARTLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGII 546
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG QVM+GY+KNPS TKQ L+E GW NTGD GWIAPHHS+GRSR CGGV+VLEGRAKD
Sbjct: 547 KVRGPQVMKGYYKNPSTTKQVLNESGWFNTGDTGWIAPHHSKGRSRHCGGVIVLEGRAKD 606
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEPLE+EEAA+RS +I QIVVIGQD+RR GAII+P+KEE A+R+
Sbjct: 607 TIVLSTGENVEPLEIEEAAMRSRVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD--- 659
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
E SKE SL+Y ELRKWTS+CSFQ+GP+ +VD+PFT++
Sbjct: 660 ---PETSKETLKSLVYQELRKWTSECSFQVGPVLIVDDPFTID 699
>gi|297800864|ref|XP_002868316.1| acyl-activating enzyme 15 [Arabidopsis lyrata subsp. lyrata]
gi|297314152|gb|EFH44575.1| acyl-activating enzyme 15 [Arabidopsis lyrata subsp. lyrata]
Length = 727
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 278/403 (68%), Positives = 335/403 (83%), Gaps = 10/403 (2%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI+ L VPA+ GDKFLSMLP WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+
Sbjct: 307 QIKHLSKYVPAQAGDKFLSMLPSWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPN 366
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y++SVPLVYETLYSG+QKQI SSA R+ +A LIR+S AY KRIYEG CLT+ QK P
Sbjct: 367 YIVSVPLVYETLYSGMQKQISASSAGRKFLALTLIRVSMAYMEMKRIYEGMCLTKEQKPP 426
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
Y+VA +DWLWAR++ A+LWPLH+LA++L+YKKI S+IGISKAG+SGGGSLP+H+D F+E
Sbjct: 427 MYIVAFVDWLWARVVAALLWPLHMLAKRLIYKKIYSSIGISKAGISGGGSLPIHVDKFFE 486
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGV +Q GYGLTE+SPV+ AR +CNVLGS G+P++ TE KIVD ETN VLP GSKGI+
Sbjct: 487 AIGVILQNGYGLTETSPVVCARTLSCNVLGSAGNPMHGTEFKIVDPETNNVLPPGSKGII 546
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG QVM+GY+KNPS TK+ L+E GW NTGD GWIAPHHSRGRSRRCGGV+VLEGRAKD
Sbjct: 547 KVRGPQVMKGYYKNPSTTKKVLNESGWFNTGDTGWIAPHHSRGRSRRCGGVIVLEGRAKD 606
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEPLE+EEAA+RS LI QIVVIGQD+RR GAII+P+KEE A+R+
Sbjct: 607 TIVLSTGENVEPLEIEEAAMRSRLIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD--- 659
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
E SKE SL+Y EL+KWTS+CSFQ+GP+ +VDEPFT++
Sbjct: 660 ---PETSKETQKSLVYQELKKWTSECSFQVGPVLIVDEPFTID 699
>gi|20799731|gb|AAM28628.1|AF503770_1 acyl-CoA synthetase-like protein [Arabidopsis thaliana]
Length = 709
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 278/403 (68%), Positives = 332/403 (82%), Gaps = 10/403 (2%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI+ L VPA GDKFLSMLP WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+
Sbjct: 289 QIKHLSKYVPALAGDKFLSMLPSWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPN 348
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y++SVPLVYETLYSGIQKQI SSA R+ +A LI++S AY KRIYEG CLT+ QK P
Sbjct: 349 YIVSVPLVYETLYSGIQKQISASSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPP 408
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
Y+VA +DWLWAR+I A+LWPLH+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+E
Sbjct: 409 MYIVAFVDWLWARVIAALLWPLHMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFE 468
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGV +Q GYGLTE+SPV+ AR +CNVLGS GHP++ TE KIVD ETN VLP GSKGI+
Sbjct: 469 AIGVILQNGYGLTETSPVVCARTLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGII 528
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG QVM+GY+KNPS TKQ L+E GW NTGD GWIAPHHS+GRSR C GV+VLEGRAKD
Sbjct: 529 KVRGPQVMKGYYKNPSTTKQVLNESGWFNTGDTGWIAPHHSKGRSRHCAGVIVLEGRAKD 588
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEPLE+EEAA+RS +I QIVVIGQD+RR GAII+P+KEE A+R+
Sbjct: 589 TIVLSTGENVEPLEIEEAAMRSRVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD--- 641
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
E SKE SL+Y ELRKWTS+CSFQ+GP+ +VD+PFT++
Sbjct: 642 ---PETSKETLKSLVYQELRKWTSECSFQVGPVLIVDDPFTID 681
>gi|255559194|ref|XP_002520618.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
gi|223540179|gb|EEF41754.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
Length = 627
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/382 (72%), Positives = 323/382 (84%), Gaps = 2/382 (0%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L D+ PAE GD+FLSMLPPWHVYER C Y+I + G+E +YT VRNLK+DL++YQPH
Sbjct: 248 QINNLLDVFPAEPGDRFLSMLPPWHVYERTCEYYIMTLGVEQVYTIVRNLKEDLKQYQPH 307
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM SVPLVYETL GIQKQI SS ++VA IR+S AY FKRIYEG LTR QKQP
Sbjct: 308 YMFSVPLVYETL--GIQKQISRSSTIHKLVALTFIRVSLAYMEFKRIYEGTFLTRIQKQP 365
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
SYL++L+D LWARI+ AIL P+H+LA+ L Y KI AIGISKAG+S GGSLPMH+D F+E
Sbjct: 366 SYLISLLDCLWARIMAAILLPVHMLAKNLFYHKIHLAIGISKAGISAGGSLPMHVDKFFE 425
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGVK+Q GYG+TESSPV A RRPTCNVLGS+GHPI HTE K+VDAET+E LP GSKGIV
Sbjct: 426 AIGVKLQNGYGMTESSPVTAVRRPTCNVLGSIGHPIRHTEFKVVDAETDEALPDGSKGIV 485
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG QVM+GY+KNP ATKQ LDE+GWLNTGDIGWIAPHHS GRSR+C GV+VLEGRAKD
Sbjct: 486 KVRGPQVMKGYYKNPWATKQVLDEEGWLNTGDIGWIAPHHSIGRSRQCSGVVVLEGRAKD 545
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGEN+EP E+EEAA+RS+LI+QI+VIGQDQRR GAIIVP+KEEVL+AAK+LSI+
Sbjct: 546 TIVLSTGENIEPSEIEEAAMRSALIQQIIVIGQDQRRLGAIIVPNKEEVLLAAKKLSIID 605
Query: 419 ADASELSKEKTISLLYGELRKW 440
A+ SEL KE+ S+L ELR W
Sbjct: 606 ANTSELKKEQMASMLDEELRNW 627
>gi|357518659|ref|XP_003629618.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355523640|gb|AET04094.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 823
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/455 (63%), Positives = 343/455 (75%), Gaps = 52/455 (11%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI++L+D VPAE GD+FLSMLPPWH YERAC YFIF+ GIE +YT VRNLKDDL RYQPH
Sbjct: 341 QIKNLWDTVPAEVGDRFLSMLPPWHAYERACEYFIFTCGIEQVYTTVRNLKDDLGRYQPH 400
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE----GFCLTRN 174
YMISVPLV+ETLYSGIQKQI TS R++VA IR+S AY +KRIYE G CLTRN
Sbjct: 401 YMISVPLVFETLYSGIQKQISTSPPVRKLVALTFIRVSLAYMEYKRIYEVTLVGKCLTRN 460
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHID 234
KQPS + +++D LWARII IL+P+HLLA K VY KI SAIG+SKAG+SGGGSLP+ +D
Sbjct: 461 VKQPSIVNSMLDCLWARIIATILFPIHLLAIKFVYSKIHSAIGLSKAGISGGGSLPLEVD 520
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+EAIGVKVQ GYGLTE+SPVIAARRP CNV+GSVGHP+ HTE K+VD+ET EVLP GS
Sbjct: 521 KFFEAIGVKVQNGYGLTETSPVIAARRPRCNVIGSVGHPVQHTEFKVVDSETGEVLPPGS 580
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KGI+KVRG VM GY+KNP AT QALD+DGWLNTGD+GWIAPHHS GRSR GV+V++G
Sbjct: 581 KGILKVRGPPVMNGYYKNPLATNQALDKDGWLNTGDLGWIAPHHSTGRSRNSSGVIVVDG 640
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
RAKDTIVLSTGENVEP ELEEAA+RSS+I+QIVVIGQD+RR GAIIVP+ EEVL A+ L
Sbjct: 641 RAKDTIVLSTGENVEPAELEEAAMRSSIIQQIVVIGQDKRRLGAIIVPNSEEVLKVAREL 700
Query: 415 SIVHADASE-LSKEKTISLLYGELR-----------------------KWTS-------- 442
SI+ + +S +S+EK ++L+Y EL+ WTS
Sbjct: 701 SIIDSISSNVVSEEKVLNLIYKELKTCDRVIGTKYPPALPMSTTAMFTNWTSFLNSDLDV 760
Query: 443 --------KCS--------FQIGPIHVVDEPFTVN 461
CS FQIGPI +V+EPFT++
Sbjct: 761 FAFISFFLSCSTYRMSESPFQIGPILLVNEPFTID 795
>gi|356538059|ref|XP_003537522.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like [Glycine
max]
Length = 720
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 286/403 (70%), Positives = 340/403 (84%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI++L DIVPAE GD+FLSMLP WH YERAC YFIFS G+E +YT VRNLK+DL YQPH
Sbjct: 290 QIKNLGDIVPAEVGDRFLSMLPSWHAYERACEYFIFSCGVEQVYTTVRNLKEDLGHYQPH 349
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLVYETLYSGIQKQI TSS R++VA IR+S Y KRIYEG CLT++QK P
Sbjct: 350 YLISVPLVYETLYSGIQKQISTSSLVRKLVALTFIRVSLRYMECKRIYEGKCLTKDQKPP 409
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
SYL +++DWLWAR++ IL+P+HLLA+ LVY KI SAIGISKAGVSGGGSL H+D F+E
Sbjct: 410 SYLHSILDWLWARVVATILFPVHLLAKILVYHKIHSAIGISKAGVSGGGSLSSHVDRFFE 469
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGV VQ GYGLTE+SPVIAARR + NV+GSVGHPI HTE K+VD+ET+EVLP GSKGI+
Sbjct: 470 AIGVNVQNGYGLTETSPVIAARRLSYNVIGSVGHPIKHTEFKVVDSETDEVLPPGSKGIL 529
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG Q+M+GY+KNPSAT Q LD DGWLNTGDIGWI PHHS GRSR GV+V++GRAKD
Sbjct: 530 KVRGPQLMKGYYKNPSATNQVLDRDGWLNTGDIGWIVPHHSTGRSRNSSGVIVVDGRAKD 589
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEP ELEEAA+RSSLI QIVVIGQD+RR GA+IVP+KEEVL AA+ SI+
Sbjct: 590 TIVLSTGENVEPGELEEAAMRSSLIHQIVVIGQDKRRLGAVIVPNKEEVLKAARESSIID 649
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
+++S+ S+EK SL+Y ELR WTS+ FQIGP+ +V++PFT++
Sbjct: 650 SNSSDASQEKVTSLIYKELRTWTSESPFQIGPVLLVNDPFTID 692
>gi|357114733|ref|XP_003559149.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like
[Brachypodium distachyon]
Length = 709
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 278/403 (68%), Positives = 339/403 (84%), Gaps = 1/403 (0%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L+DIVPA GD+FLSMLPPWH YER+ YFIF+ GI+ +YTAV+ LK+DLQRYQPH
Sbjct: 280 QINNLWDIVPAVPGDRFLSMLPPWHAYERSTEYFIFTCGIQQVYTAVKYLKEDLQRYQPH 339
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLVYETLYS IQ+QI +SS AR+ +A ALI+IS Y K+IYEG L+ N +P
Sbjct: 340 YVISVPLVYETLYSSIQRQISSSSTARKTLALALIKISLQYMESKKIYEGTVLSNNPVEP 399
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
S++V +++ LWARII A+LWP H LA+ LVYKKI S+IGISKAG+SGGGSLPMH+D F+E
Sbjct: 400 SHIVCMVNCLWARIIVALLWPFHNLAKLLVYKKIHSSIGISKAGISGGGSLPMHVDKFFE 459
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIG+KVQ GYGLTE+SPV+AARRP CNVLG+VGHP+ HTEIK+VD ET E LP GSKGIV
Sbjct: 460 AIGIKVQNGYGLTETSPVVAARRPFCNVLGTVGHPVKHTEIKVVDIETGEALPDGSKGIV 519
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
K++G VM+GY+KNPSAT +ALD++GW NTGDIGW+APHH+ G SR+CGG+LVLEGRAKD
Sbjct: 520 KIKGPPVMKGYYKNPSATNKALDQEGWFNTGDIGWLAPHHTTGPSRKCGGMLVLEGRAKD 579
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVL+TGENVEP ELEEAA RS+LI+QI+VIGQD+RR GAIIVP+ +EVL AKR S +
Sbjct: 580 TIVLTTGENVEPAELEEAAGRSNLIQQIMVIGQDRRRLGAIIVPNNDEVLATAKRKSRLD 639
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
D +EL+K ++LLY ELR WT CSFQIGPI +VDEPFT++
Sbjct: 640 GD-NELAKATILNLLYDELRAWTVGCSFQIGPILIVDEPFTID 681
>gi|108712074|gb|ABF99869.1| AMP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
Length = 545
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/403 (68%), Positives = 336/403 (83%), Gaps = 1/403 (0%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI++L+D VPA GD+FLSMLPPWH YERA YFIF+ GI+ +YT V+ LK+DLQRYQP
Sbjct: 116 QIKNLWDFVPAVPGDRFLSMLPPWHAYERASEYFIFTYGIQQVYTTVKYLKEDLQRYQPQ 175
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y++SVPLVYE LYS IQ+QI +SS AR+ VA ALI+IS Y KRIYEG L+ N +P
Sbjct: 176 YIVSVPLVYEILYSSIQRQISSSSTARKFVALALIKISLLYMEAKRIYEGTVLSNNPVKP 235
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
S++V +++WL ARI+ A+LWPLH LA+ LVYKKI SAIGISKAG+SGGGSLPMH+D F+E
Sbjct: 236 SFIVYMVNWLSARIVAALLWPLHNLAKTLVYKKIHSAIGISKAGISGGGSLPMHVDKFFE 295
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGVKVQ GYGLTE+SPV+AARRP CNVLG+VGHP+ HTEIK+VD ET EVLP GSKG+V
Sbjct: 296 AIGVKVQNGYGLTETSPVVAARRPFCNVLGTVGHPVKHTEIKVVDMETGEVLPDGSKGVV 355
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG QVM+GY+KNPSAT + LD++GW +TGDIGWIAPH G SR+CGG+LVLEGRAKD
Sbjct: 356 KVRGPQVMKGYYKNPSATNKVLDQEGWFDTGDIGWIAPHCPTGPSRKCGGMLVLEGRAKD 415
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVL+TGENVEP E+EEAA RS LI QIVV+GQD+RR GA+IVP+ +EVL AKR SI+
Sbjct: 416 TIVLTTGENVEPAEIEEAASRSDLINQIVVVGQDKRRIGALIVPNYDEVLATAKRKSILD 475
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
+ +EL+K+K ++LLY ELR W CSFQIGPI +VDEPFTV+
Sbjct: 476 GN-NELAKDKVLNLLYDELRTWMVDCSFQIGPILIVDEPFTVD 517
>gi|115456555|ref|NP_001051878.1| Os03g0845500 [Oryza sativa Japonica Group]
gi|41469655|gb|AAS07378.1| putative AMP-binding protein [Oryza sativa Japonica Group]
gi|108712073|gb|ABF99868.1| AMP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113550349|dbj|BAF13792.1| Os03g0845500 [Oryza sativa Japonica Group]
gi|222626158|gb|EEE60290.1| hypothetical protein OsJ_13349 [Oryza sativa Japonica Group]
Length = 750
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/403 (68%), Positives = 336/403 (83%), Gaps = 1/403 (0%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI++L+D VPA GD+FLSMLPPWH YERA YFIF+ GI+ +YT V+ LK+DLQRYQP
Sbjct: 321 QIKNLWDFVPAVPGDRFLSMLPPWHAYERASEYFIFTYGIQQVYTTVKYLKEDLQRYQPQ 380
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y++SVPLVYE LYS IQ+QI +SS AR+ VA ALI+IS Y KRIYEG L+ N +P
Sbjct: 381 YIVSVPLVYEILYSSIQRQISSSSTARKFVALALIKISLLYMEAKRIYEGTVLSNNPVKP 440
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
S++V +++WL ARI+ A+LWPLH LA+ LVYKKI SAIGISKAG+SGGGSLPMH+D F+E
Sbjct: 441 SFIVYMVNWLSARIVAALLWPLHNLAKTLVYKKIHSAIGISKAGISGGGSLPMHVDKFFE 500
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGVKVQ GYGLTE+SPV+AARRP CNVLG+VGHP+ HTEIK+VD ET EVLP GSKG+V
Sbjct: 501 AIGVKVQNGYGLTETSPVVAARRPFCNVLGTVGHPVKHTEIKVVDMETGEVLPDGSKGVV 560
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG QVM+GY+KNPSAT + LD++GW +TGDIGWIAPH G SR+CGG+LVLEGRAKD
Sbjct: 561 KVRGPQVMKGYYKNPSATNKVLDQEGWFDTGDIGWIAPHCPTGPSRKCGGMLVLEGRAKD 620
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVL+TGENVEP E+EEAA RS LI QIVV+GQD+RR GA+IVP+ +EVL AKR SI+
Sbjct: 621 TIVLTTGENVEPAEIEEAASRSDLINQIVVVGQDKRRIGALIVPNYDEVLATAKRKSILD 680
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
+ +EL+K+K ++LLY ELR W CSFQIGPI +VDEPFTV+
Sbjct: 681 GN-NELAKDKVLNLLYDELRTWMVDCSFQIGPILIVDEPFTVD 722
>gi|62321026|dbj|BAD94085.1| A6 anther-specific protein [Arabidopsis thaliana]
Length = 402
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/384 (69%), Positives = 320/384 (83%), Gaps = 10/384 (2%)
Query: 78 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 137
MLP WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+Y++SVPLVYETLYSGIQKQ
Sbjct: 1 MLPSWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPNYIVSVPLVYETLYSGIQKQ 60
Query: 138 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 197
I SSA R+ +A LI++S AY KRIYEG CLT+ QK P Y+VA +DWLWAR+I A+L
Sbjct: 61 ISASSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPPMYIVAFVDWLWARVIAALL 120
Query: 198 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 257
WPLH+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+EAIGV +Q GYGLTE+SPV+
Sbjct: 121 WPLHMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFEAIGVILQNGYGLTETSPVV 180
Query: 258 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 317
AR +CNVLGS GHP++ TE KIVD ETN VLP GSKGI+KVRG QVM+GY+KNPS TK
Sbjct: 181 CARTLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGIIKVRGPQVMKGYYKNPSTTK 240
Query: 318 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 377
Q L+E GW NTGD GWIAPHHS+GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA
Sbjct: 241 QVLNESGWFNTGDTGWIAPHHSKGRSRHCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAA 300
Query: 378 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 437
+RS +I QIVVIGQD+RR GAII+P+KEE A+R+ E SKE SL+Y EL
Sbjct: 301 MRSRVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD------PETSKETLKSLVYQEL 350
Query: 438 RKWTSKCSFQIGPIHVVDEPFTVN 461
RKWTS+CSFQ+GP+ +VD+PFT++
Sbjct: 351 RKWTSECSFQVGPVLIVDDPFTID 374
>gi|218194090|gb|EEC76517.1| hypothetical protein OsI_14303 [Oryza sativa Indica Group]
Length = 682
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/403 (68%), Positives = 336/403 (83%), Gaps = 1/403 (0%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI++L+D VPA GD+FLSMLPPWH YERA YFIF+ GI+ +YT V+ LK+DLQRYQP
Sbjct: 253 QIKNLWDFVPAVPGDRFLSMLPPWHAYERASEYFIFTYGIQQVYTTVKYLKEDLQRYQPQ 312
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y++SVPLVYE LYS IQ+QI +SS AR+ VA ALI+IS Y KRIYEG L+ N +P
Sbjct: 313 YIVSVPLVYEILYSSIQRQISSSSTARKFVALALIKISLLYMEAKRIYEGTVLSNNPVKP 372
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
S++V +++WL ARI+ A+LWPLH LA+ LVYKKI SAIGISKAG+SGGGSLPMH+D F+E
Sbjct: 373 SFIVYMVNWLSARIVAALLWPLHNLAKTLVYKKIHSAIGISKAGISGGGSLPMHVDKFFE 432
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGVKVQ GYGLTE+SPV+AARRP CNVLG+VGHP+ HTEIK+VD ET EVLP GSKG+V
Sbjct: 433 AIGVKVQNGYGLTETSPVVAARRPFCNVLGTVGHPVKHTEIKVVDMETGEVLPDGSKGVV 492
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
KVRG QVM+GY+KNPSAT + LD++GW +TGDIGWIAPH G SR+CGG+LVLEGRAKD
Sbjct: 493 KVRGPQVMKGYYKNPSATNKVLDQEGWFDTGDIGWIAPHCPTGPSRKCGGMLVLEGRAKD 552
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVL+TGENVEP E+EEAA RS LI QIVV+GQD+RR GA+IVP+ +EVL AKR SI+
Sbjct: 553 TIVLTTGENVEPAEIEEAASRSDLINQIVVVGQDKRRIGALIVPNYDEVLATAKRKSILD 612
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
++EL+K+K ++LLY ELR W CSFQIGPI +VDEPFTV+
Sbjct: 613 G-SNELAKDKVLNLLYDELRTWMVDCSFQIGPILIVDEPFTVD 654
>gi|147784541|emb|CAN68253.1| hypothetical protein VITISV_043922 [Vitis vinifera]
Length = 929
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/350 (66%), Positives = 273/350 (78%), Gaps = 9/350 (2%)
Query: 114 RYQPHYMISVPLVYETLYSGI--QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 171
+Y H + + E L +G+ + T ++ + L + F G L
Sbjct: 559 KYTKHVEVDKHFIKEKLENGLIFMAYVLTVEQVVDILTKGLPKKQFDDL-------GKFL 611
Query: 172 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPM 231
++QKQ SY+ ++ DWLWA+II AILWP+H+L +KL+Y KI SAIGISKAGVSGGGSLP
Sbjct: 612 QKSQKQYSYIASIFDWLWAKIIAAILWPVHMLGKKLIYSKIHSAIGISKAGVSGGGSLPS 671
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
H+D F+EAI +KVQ GYGLTE SPV AARRPTCNVLGSVGHPI HTEIKIVD+ET+E+LP
Sbjct: 672 HVDRFFEAIDIKVQNGYGLTECSPVTAARRPTCNVLGSVGHPIRHTEIKIVDSETDELLP 731
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
GSKGIVKV+G VM+GY+KN ATK+ LDEDGWLNTGDIGWIAPHHS GRSR CGGV+V
Sbjct: 732 PGSKGIVKVKGPHVMKGYYKNELATKKVLDEDGWLNTGDIGWIAPHHSVGRSRHCGGVIV 791
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
LEGRAKDTIVLSTGENVEP ELEEAA+RS+LI+QIVVIGQDQRR GAIIVP+KEEVL AA
Sbjct: 792 LEGRAKDTIVLSTGENVEPTELEEAAMRSTLIQQIVVIGQDQRRLGAIIVPNKEEVLAAA 851
Query: 412 KRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
KR SI++A+ SELSKEK LL+ E+R WT SFQIGPI VVDEPFT++
Sbjct: 852 KRXSILNANTSELSKEKITGLLHEEIRTWTEGFSFQIGPILVVDEPFTID 901
>gi|302775100|ref|XP_002970967.1| hypothetical protein SELMODRAFT_95195 [Selaginella moellendorffii]
gi|300160949|gb|EFJ27565.1| hypothetical protein SELMODRAFT_95195 [Selaginella moellendorffii]
Length = 616
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/403 (54%), Positives = 287/403 (71%), Gaps = 19/403 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q++ L + GD+FLS+LPPWH+YER YF F+RGIE +YT+V+ LKDDLQ Y
Sbjct: 202 QMKYLDQCIQPVPGDRFLSLLPPWHMYERVAEYFTFTRGIEQVYTSVKFLKDDLQAYPTQ 261
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y +SVPLVY+TLYSG+QKQ+ +S RR + + IS + KRI EG LTR ++ P
Sbjct: 262 YFVSVPLVYDTLYSGVQKQLSKASGLRRALVMGFMAISSFFKDLKRISEGRSLTRAREHP 321
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
+ L + A ++ IL PLH L +K+V+ KI++AIGI KAG+SGGGSLP H+D F+E
Sbjct: 322 NRLECFL----AGVMAMILSPLHFLGDKIVFSKIRAAIGIRKAGISGGGSLPKHVDKFFE 377
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+G+ + GYGLTESSPV++ R + NVLG+VG P+ TE+KIVD E+ + L G+KGIV
Sbjct: 378 VVGITLLNGYGLTESSPVVSTRAFSDNVLGTVGMPLRETEVKIVDPESRKTLANGNKGIV 437
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
VRG QVM+GY+KNP AT++A+D DGWL+TGD+GW+AP G +R+CGG+LVLEGRAK+
Sbjct: 438 TVRGPQVMKGYYKNPDATQKAIDGDGWLDTGDLGWVAPVWKTGAARKCGGMLVLEGRAKE 497
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEP E+EEAAL+SSLI QI+V+GQDQRR GA+IV K+ +A L
Sbjct: 498 TIVLSTGENVEPTEIEEAALQSSLIDQIMVVGQDQRRLGALIVASKDTAATSANDLK--- 554
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
SL+ EL++ TS CSFQIGP +V+EPFT+
Sbjct: 555 ------------SLVREELQRCTSSCSFQIGPFVIVNEPFTME 585
>gi|302757391|ref|XP_002962119.1| hypothetical protein SELMODRAFT_76207 [Selaginella moellendorffii]
gi|300170778|gb|EFJ37379.1| hypothetical protein SELMODRAFT_76207 [Selaginella moellendorffii]
Length = 617
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/403 (54%), Positives = 286/403 (70%), Gaps = 19/403 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q++ L + GD+FLS+LPPWH+YER YF F+RGIE +YT V+ LKDDLQ Y
Sbjct: 203 QMKYLDQCIQPVPGDRFLSLLPPWHMYERVAEYFTFTRGIEQVYTTVKFLKDDLQAYPTQ 262
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y +SVPLVY+TLYSG+QKQ+ +S RR + + IS + KRI EG LTR ++ P
Sbjct: 263 YFVSVPLVYDTLYSGVQKQLSKASGLRRALVMGFMAISSFFKDLKRISEGRSLTRAKEHP 322
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
+ L + A ++ IL PLH L +K+V+ KI++AIGI KAG+SGGGSLP H+D F+E
Sbjct: 323 NRLECFL----AGVMAMILSPLHFLGDKIVFSKIRAAIGIQKAGISGGGSLPKHVDKFFE 378
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+G+ + GYGLTESSPV++ R + NVLG+VG P+ TE+KIVD E+ + L G+KGIV
Sbjct: 379 VVGITLLNGYGLTESSPVVSTRAFSDNVLGTVGMPLPETEVKIVDPESRKPLANGNKGIV 438
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
VRG QVM+GY+KNP AT++A+D DGWL+TGD+GW+AP G +R+CGG+LVLEGRAK+
Sbjct: 439 TVRGPQVMKGYYKNPDATQKAIDGDGWLDTGDLGWVAPVWKTGAARKCGGMLVLEGRAKE 498
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEP E+EEAAL+SSLI QI+V+GQDQRR GA+IV K+ +A L
Sbjct: 499 TIVLSTGENVEPTEIEEAALQSSLIDQIMVVGQDQRRLGALIVASKDTAATSANDLK--- 555
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
SL+ EL++ TS CSFQIGP +V+EPFT+
Sbjct: 556 ------------SLVREELQRCTSSCSFQIGPFVIVNEPFTME 586
>gi|168043320|ref|XP_001774133.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674540|gb|EDQ61047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 672
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 280/402 (69%), Gaps = 2/402 (0%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L+ ++ G +FL++LPPWH+YER+C YF SRG+ +YT+V++LK+DL Y+P
Sbjct: 244 QVINLWSVIQPSPGQRFLTILPPWHMYERSCEYFYLSRGVNHVYTSVKSLKEDLVLYKPD 303
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y ++VPLV++ LY+G+QKQ+ ++ R+ +A ALI IS Y KR+ +G L +K+
Sbjct: 304 YFVAVPLVFDLLYNGVQKQLNAATGFRKTLAMALISISTKYMDAKRVAQGRDLASARKKQ 363
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
A +WL A ++ +IL PLHL+ + LV+KKI++ + + A +SGGGSLP H+D F+E
Sbjct: 364 PIFTAAKEWLAAMVVMSILLPLHLITKLLVFKKIRATLTMGTA-ISGGGSLPTHVDKFFE 422
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
IG+ V GYGLTE+SPV++ R P N+LGSVG PI T +KIVD ETN L G KG+V
Sbjct: 423 MIGIPVLNGYGLTETSPVLSCRLPYNNILGSVGIPIPGTRVKIVDPETNRQLGPGIKGLV 482
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
K G Q+M+GY+K ATK+A+D +GW +TGD+GWIAP G +RRCGGVL+L+GRAKD
Sbjct: 483 KASGPQIMKGYYK-AKATKKAIDPEGWFDTGDLGWIAPKMGIGCARRCGGVLILDGRAKD 541
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEP E+EE +SSLI+ IVV+GQDQRR GA++V +K+E+ AAK
Sbjct: 542 TIVLSTGENVEPTEIEEVMSQSSLIQNIVVLGQDQRRLGALVVANKDELYAAAKERMQAK 601
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 460
+ +E S + + ELR + + CS + ++ EPFTV
Sbjct: 602 GNTAEPSDADLRACIREELRTYGAGCSHSVATFEILYEPFTV 643
>gi|168050144|ref|XP_001777520.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671138|gb|EDQ57695.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 778
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 282/402 (70%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI L +V GD+FLS+LPPWH+YER+ YF SRG+ +YT+V+ LK+DL RY P
Sbjct: 343 QIVHLGSVVQPGPGDRFLSLLPPWHMYERSAEYFALSRGVSQVYTSVKTLKEDLARYPPD 402
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y ++VPLV++ LYSG+QKQI S R+ +A L+ +S + KR EG +T+ ++
Sbjct: 403 YFVAVPLVFDILYSGVQKQIAAGSKFRKQIALTLLSLSLKFVDIKRKQEGRDVTKGRESF 462
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
S + A W A I +L P HLLA+KLVY KI ++IGI KA +SGGGSLP ++D F+E
Sbjct: 463 SPVAAAKVWAIATIGALLLLPFHLLAQKLVYSKILASIGIKKAAISGGGSLPPYVDRFFE 522
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIG++V GYGLTE+SPV++ R P+ NVLG+VG PI TEIK+VD + ++P G KG V
Sbjct: 523 AIGIRVLNGYGLTETSPVVSCRLPSNNVLGTVGGPIPETEIKVVDPNSGNIVPPGIKGSV 582
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
K+RG QVM+GY+KNP+AT +A+D DGW TGD+GW P G +R CGG+LVL+GRAKD
Sbjct: 583 KIRGPQVMKGYYKNPAATSKAIDSDGWFETGDLGWKVPSSPVGPARMCGGLLVLDGRAKD 642
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
TIVLSTGENVEP E+EEA ++S LI+ ++++GQD+RR GA+IV +KEE+ A K +
Sbjct: 643 TIVLSTGENVEPQEIEEAIMQSKLIQNVMLVGQDKRRLGALIVGNKEELEAAVKEYKLAK 702
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 460
D+S+ K +++ E+ + + S+ +GP +++E FT+
Sbjct: 703 GDSSKPIKSDRTNVIRREINRLLANSSWPVGPFALIEESFTI 744
>gi|255559188|ref|XP_002520615.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
gi|223540176|gb|EEF41751.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
Length = 571
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/253 (73%), Positives = 217/253 (85%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L D+VPAE GD+FLSMLPPWH YERAC YFI + G+E ++T VRNLK+DL+ YQPH
Sbjct: 312 QINNLLDVVPAEPGDRFLSMLPPWHAYERACEYFIMTLGVEQVFTTVRNLKEDLKHYQPH 371
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YMISVPLVYETLYSGIQKQI TSS R++VA IR+S AY FKRIYEG LTR QKQP
Sbjct: 372 YMISVPLVYETLYSGIQKQISTSSTIRKLVALTFIRVSLAYMEFKRIYEGTYLTRIQKQP 431
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
SYL++L+D LWARI+ AIL P+H+LA+KLVY+KI AIGISKAG+SGGGSLPMH+D F+E
Sbjct: 432 SYLISLLDCLWARIMAAILLPVHMLAKKLVYRKIHLAIGISKAGISGGGSLPMHVDKFFE 491
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIGVKVQ GYG+TESSPV AARRPTCNVLGS+GHPI HTE K+VDAET+E P GSKGIV
Sbjct: 492 AIGVKVQNGYGMTESSPVTAARRPTCNVLGSIGHPIRHTEFKVVDAETDEAFPDGSKGIV 551
Query: 299 KVRGSQVMQGYFK 311
KV+G QVM+GY+K
Sbjct: 552 KVKGPQVMKGYYK 564
>gi|414873918|tpg|DAA52475.1| TPA: hypothetical protein ZEAMMB73_557217 [Zea mays]
Length = 603
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/267 (70%), Positives = 222/267 (83%), Gaps = 13/267 (4%)
Query: 207 LVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 266
LVYKKI SAIGISKAG+SGGGSLPMH+D F+EAIG+KVQ GYGLTE+SPV+AARRP CNV
Sbjct: 310 LVYKKIHSAIGISKAGISGGGSLPMHVDKFFEAIGIKVQNGYGLTETSPVVAARRPFCNV 369
Query: 267 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 326
LG+VGHPI HTEIKI D ET EVLP GSKGIVK++G QVM+GY+KNPSAT +A D++GW
Sbjct: 370 LGTVGHPIKHTEIKIFDIETGEVLPDGSKGIVKIKGPQVMKGYYKNPSATNEAFDQEGWF 429
Query: 327 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 386
+TGD+GWI PHH+ G SR+CGG++VLEGRAKDTIVLSTGENVEP E+EEAA RS+LI QI
Sbjct: 430 STGDVGWIVPHHAMGPSRQCGGMIVLEGRAKDTIVLSTGENVEPAEIEEAASRSTLINQI 489
Query: 387 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW------ 440
VVIGQDQRR GAIIVP+ +EVL AKR SI+ D EL+K+K +++LY ELR W
Sbjct: 490 VVIGQDQRRLGAIIVPNNDEVLAEAKRKSILGEDG-ELAKDKVMNMLYDELRTWRKCLII 548
Query: 441 ------TSKCSFQIGPIHVVDEPFTVN 461
T+ CSF++GPI VVDEPFT++
Sbjct: 549 LFTRFRTAHCSFRVGPILVVDEPFTID 575
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 42/51 (82%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLK 109
QI +L++IVPAE GD+FLSMLP WH YERAC YFIFS GI+ +YT V+ LK
Sbjct: 258 QINNLWEIVPAEPGDRFLSMLPTWHAYERACEYFIFSYGIQQVYTTVKYLK 308
>gi|428778235|ref|YP_007170022.1| AMP-dependent synthetase and ligase [Halothece sp. PCC 7418]
gi|428692514|gb|AFZ45808.1| AMP-dependent synthetase and ligase [Halothece sp. PCC 7418]
Length = 636
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/419 (45%), Positives = 263/419 (62%), Gaps = 31/419 (7%)
Query: 57 NF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQR 114
NF Q+R++ D++ + GD+ LS+LP WH YERA YF+ SRG L+YT +R+ K DL+
Sbjct: 205 NFLHQVRAIGDVIQPQAGDRVLSILPSWHAYERAAEYFLLSRGCHLIYTNLRSFKKDLRE 264
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
+P+YM+ VP ++E++Y GIQK + + ++ + + IS Y KRI EG L
Sbjct: 265 QKPNYMVGVPRLWESVYDGIQKNLNQQTGNKKKLIDFFLSISNRYLKTKRISEGLDL--E 322
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
+PS LI L A C++L PLH L +K+VY+ ++ A G + KA +SGGG+L HI
Sbjct: 323 NLRPS----LIAKLTASSQCSVLKPLHNLGDKIVYQTVREATGGNLKAVISGGGALAKHI 378
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D FYE IG+ + VGYGLTE+SPV ARR N+ GS G I TE KIVD ET + LP G
Sbjct: 379 DDFYELIGIPLLVGYGLTETSPVTHARRLYHNLRGSSGPAIPETETKIVDPETKKSLPDG 438
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG+V +RG+QVMQGY+K P AT +A+DE+GW NTGD+GWI P G LVL
Sbjct: 439 EKGLVMIRGTQVMQGYYKKPEATAKAIDEEGWFNTGDLGWITPT----------GDLVLT 488
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GRAKDTIVLS GEN+EP LE A LRS I QI+V+GQDQR GA+IVP+ E + AK
Sbjct: 489 GRAKDTIVLSNGENIEPQPLENACLRSIYIDQIMVVGQDQRCLGALIVPNVEILEQWAKD 548
Query: 414 LSIVHADASELSKEKTIS------LLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 461
++ + D +E E+T++ L EL + + +IG ++ EPF+++
Sbjct: 549 HNL-NLDFAEGQLEETLANSQIQKLFRDELNREVKNRPGYRIDDRIGVFKLILEPFSMD 606
>gi|298490615|ref|YP_003720792.1| AMP-dependent synthetase and ligase ['Nostoc azollae' 0708]
gi|298232533|gb|ADI63669.1| AMP-dependent synthetase and ligase ['Nostoc azollae' 0708]
Length = 661
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 260/412 (63%), Gaps = 26/412 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L +V E+GD LS+LP WH YER+ YF+ S+G +YT +R++KDDL+ ++P+
Sbjct: 236 QVTTLGTVVQPESGDIVLSILPTWHSYERSGEYFLLSQGCTQVYTNLRSVKDDLKNFKPN 295
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+I+VP +E++Y G+QKQ + A ++ + + L+ +S Y +RI EG L + P
Sbjct: 296 YIIAVPRFWESIYEGVQKQFRSQPAKKQQLIKFLLDMSQKYIQARRIAEGLSL--HHVNP 353
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S ++ L A+I+ L P L EKLVY K++ A G K +SGGG+LP HID F+
Sbjct: 354 SA----VERLGAKILELALLPFQTLGEKLVYAKVREATGDKIKQVISGGGALPQHIDNFF 409
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E IGV++ GYGLTE+SPV ARRP N+ GS G PI TE+KIV ET + LPAG +G+
Sbjct: 410 EIIGVEILQGYGLTETSPVTNARRPWRNLRGSSGQPIPGTEVKIVSPETRQPLPAGERGL 469
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG Q+MQGY++NP ATK+ +D +GW ++GD+GW+ P + LVL GRAK
Sbjct: 470 VLLRGPQIMQGYYQNPEATKKVIDAEGWFDSGDLGWVTPQND----------LVLTGRAK 519
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRLS 415
DTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E E A + +
Sbjct: 520 DTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSLGALIVPNLEALEKSAANQNDN 579
Query: 416 IVHADASELSKEKTI--SLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
I + ++ E + L EL + + +IGP ++ EPF++
Sbjct: 580 ITASSGQKIDLESKMIQDLFRQELNREVKNRPGYRADDRIGPFQLIIEPFSI 631
>gi|434393957|ref|YP_007128904.1| Long-chain-fatty-acid--CoA ligase [Gloeocapsa sp. PCC 7428]
gi|428265798|gb|AFZ31744.1| Long-chain-fatty-acid--CoA ligase [Gloeocapsa sp. PCC 7428]
Length = 655
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/410 (41%), Positives = 257/410 (62%), Gaps = 24/410 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ L IV + GD+ LS+LP WHVYER C YF+ S+G +YT +R +K D++ ++P+
Sbjct: 233 QVEMLGCIVQPKEGDRVLSILPTWHVYERTCEYFLLSQGCTQIYTNIRQVKKDIREFKPN 292
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM+ VP ++E++Y G++KQ A ++ + + S + +RI G L N P
Sbjct: 293 YMVGVPRLWESIYEGVKKQFREQPANKQQLIDFFLTKSQQFIEARRIVHGLSL--NSLNP 350
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S L + L A + L P+H L EK+VY+K++ A G K +SGGGSL MH++ F+
Sbjct: 351 S----LSERLSASVQATALAPIHALGEKIVYRKVREATGGQLKQVISGGGSLAMHLENFF 406
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +GV+V VGYGLTE+SPV ARRP N+ GS G P+ T+++IVD ET + LP G +G+
Sbjct: 407 EIVGVEVLVGYGLTETSPVTNARRPWRNLRGSAGQPLPGTQVRIVDPETRQPLPQGERGL 466
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V VRG Q+MQGY++NP AT +A+D +GW +TGD+GW+ P + LV+ GRAK
Sbjct: 467 VMVRGPQIMQGYYQNPEATAKAIDSEGWFDTGDLGWLTPEND----------LVITGRAK 516
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRLS 415
DTIVL+ GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ E E A++ +
Sbjct: 517 DTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQKSLGALIVPNLEALEQWAASQNIE 576
Query: 416 IVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ ++L+ + +L EL + + +IGP +V EPF++
Sbjct: 577 LKVDSPTDLNSKTIQNLFRQELNREVKNRPGYRPDDRIGPFELVLEPFSM 626
>gi|218245215|ref|YP_002370586.1| AMP-dependent synthetase/ligase [Cyanothece sp. PCC 8801]
gi|257058247|ref|YP_003136135.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 8802]
gi|218165693|gb|ACK64430.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 8801]
gi|256588413|gb|ACU99299.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 8802]
Length = 639
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 259/420 (61%), Gaps = 33/420 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L ++ + GD+ LS+LP WH YER+ YF+ S+G + YT++R K DL+R++PH
Sbjct: 206 QVTNLDSVIQPKPGDRVLSILPSWHSYERSAEYFLLSQGCTMTYTSIRTFKTDLKRFKPH 265
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+M+ VP ++E+LY GIQKQ S R+ + + +S Y +RI + L
Sbjct: 266 HMVGVPRLWESLYEGIQKQFREQSPTRQKLVEFFLNLSERYILAQRIAKNLSLEH----- 320
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ + + L AR+ +L PLH+L +KL+Y KI+ +G + + VSGGGSL H+D+FY
Sbjct: 321 -FHASSFERLLARLQATLLSPLHILGDKLIYGKIRQGVGGNFETMVSGGGSLAKHLDMFY 379
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E + + V VGYGLTE+SPV AR + N+ GS G P+ TEI IVD + ++LP G +G+
Sbjct: 380 EIVNLPVLVGYGLTETSPVTNARTHSHNIRGSSGQPVPETEICIVDPDNRQILPQGQRGL 439
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V VRGSQVMQGY+K P AT++A+D DGW +TGD+GW+ P LV+ GRAK
Sbjct: 440 VLVRGSQVMQGYYKKPEATRKAIDPDGWFDTGDLGWLTPMQD----------LVITGRAK 489
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK--RLS 415
DTIVLS GEN+EP +E+A +RS I Q++V+GQDQ+ GA+IVP+ + ++ AK +L+
Sbjct: 490 DTIVLSNGENIEPQAIEDACIRSPYIDQMMVVGQDQKALGALIVPNLDALVTWAKSQQLT 549
Query: 416 IVHADASELSKEKTISLLYGE-----LRKWTS---------KCSFQIGPIHVVDEPFTVN 461
+ DAS +E S LY + R+ S + QI ++ EPF+++
Sbjct: 550 LNLPDASASREEILHSDLYSQPVQSLFRQELSREVKNRPGYRPDDQIKTFELILEPFSID 609
>gi|119487286|ref|ZP_01621037.1| AMP-dependent synthetase and ligase [Lyngbya sp. PCC 8106]
gi|119455841|gb|EAW36976.1| AMP-dependent synthetase and ligase [Lyngbya sp. PCC 8106]
Length = 648
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/418 (43%), Positives = 264/418 (63%), Gaps = 32/418 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ S+ D+V E GD LS+LP WH + R YF+ SRG +Y+++R K DL+ ++P
Sbjct: 219 QLNSIPDVVQPEIGDNVLSLLPTWHSFGRIGQYFLLSRGCTQIYSSIRYFKRDLKEFKPR 278
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM SVP ++E++Y QKQ+ A+R+ +A+ +S Y +R+ +G LT + + P
Sbjct: 279 YMTSVPRIWESIYEAAQKQLGEQPASRQKIAKFCFSLSEQYVLARRVVQG--LTLDGQSP 336
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFY 237
+ + AR+ +L PLH LA+KLVY+KI++A G + K +SGGGSL MH++ FY
Sbjct: 337 GGMQKAM----ARLKMLLLTPLHQLADKLVYQKIRAATGGMFKFAISGGGSLAMHLETFY 392
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +GV + VGYGLTE+SPV+ ARRP N+ GS G PI TEI+IVD ET VLP KG+
Sbjct: 393 EIVGVDLLVGYGLTETSPVLTARRPKHNLRGSAGKPIPQTEIRIVDLETGRVLPRLEKGL 452
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V RG Q+M+GYF+NP AT +A+D +GW NTGDIGW++ + LVL GRAK
Sbjct: 453 VLARGPQIMKGYFENPEATAKAIDPEGWFNTGDIGWLSRQND----------LVLTGRAK 502
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRL- 414
DTIVLS GEN+EP +E+A +RS I Q++++GQDQ+ GA+IVP+ E E ++ L
Sbjct: 503 DTIVLSNGENIEPQPIEDACVRSPYIDQMILVGQDQKVLGALIVPNFEGLEKWAVSQNLK 562
Query: 415 -------SIVHADASELSKEKTISLLYGEL-RKWTSKCSF----QIGPIHVVDEPFTV 460
S+ ++ +L + +L EL R+ ++ S+ +IGP ++ EPFT+
Sbjct: 563 LKLPHSESVNDSEGLDLESQPVQNLFRQELNREVKNRPSYRVDDRIGPFRLILEPFTM 620
>gi|422302727|ref|ZP_16390086.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9806]
gi|389787971|emb|CCI16697.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9806]
Length = 639
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/418 (43%), Positives = 251/418 (60%), Gaps = 33/418 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I E GD+ LS+LP WH YER+C YFI ++G +YT++R K DL+++ P
Sbjct: 207 QVRNLNAIFQPEPGDRVLSILPSWHSYERSCEYFILAQGCTQIYTSIRTFKQDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L P
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLHASP 326
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 327 G------ERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD ++ EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLQSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI- 416
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A+ I
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKIS 550
Query: 417 -----VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFT 459
H+D +S+L +K ++L EL++ + QI ++ EPF+
Sbjct: 551 LNLPDSHSDRSTILSSDLYSKKVLALYQQELKREVRNRPGYRADDQIKTFELILEPFS 608
>gi|443327638|ref|ZP_21056258.1| AMP-forming long-chain acyl-CoA synthetase [Xenococcus sp. PCC
7305]
gi|442792730|gb|ELS02197.1| AMP-forming long-chain acyl-CoA synthetase [Xenococcus sp. PCC
7305]
Length = 640
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/350 (47%), Positives = 229/350 (65%), Gaps = 17/350 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L I+ E GD+ LS+LP WH YER+ Y++ S+G YT +R+LK DL+ YQPH
Sbjct: 208 QVNNLRQIILCEQGDRVLSILPSWHAYERSAEYYLLSQGCTQYYTNLRSLKSDLKTYQPH 267
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YMI VP ++E+LY G+QKQ + ++ + +S Y +R+ G L + QP
Sbjct: 268 YMIGVPRLWESLYEGVQKQFREQAPTKQKLINWFFNLSQKYVMARRLSRGLDL--DNLQP 325
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S + L +A + L PLHLL +K+VY+K++ A+G K VSGGGSL H+D FY
Sbjct: 326 SAIAKL----FATLQTFALLPLHLLGDKIVYQKVRDAVGGKVKTFVSGGGSLAKHLDDFY 381
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E + + V VGYGLTE++PV AR N + G PI TEIKIV+ ET E LP G+KG+
Sbjct: 382 ELVNIPVLVGYGLTETAPVTNARTLDRNFSKTSGQPIAETEIKIVNPETKEALPTGAKGL 441
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RGSQVMQGY+KNP AT +A+D +GW ++GD+GW+ P + LVL GRAK
Sbjct: 442 VLIRGSQVMQGYYKNPEATAKAIDAEGWFDSGDLGWVTPDND----------LVLTGRAK 491
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
DTIVL+ GEN+EP +E+A +RSS I QI+++GQDQR GA+IVP+ E V
Sbjct: 492 DTIVLTNGENIEPQPIEDACIRSSYIDQIMLVGQDQRALGALIVPNLETV 541
>gi|428320800|ref|YP_007118682.1| Long-chain-fatty-acid--CoA ligase [Oscillatoria nigro-viridis PCC
7112]
gi|428244480|gb|AFZ10266.1| Long-chain-fatty-acid--CoA ligase [Oscillatoria nigro-viridis PCC
7112]
Length = 649
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/410 (43%), Positives = 248/410 (60%), Gaps = 27/410 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ + I+ E G+ LS+LP WH YER YF+ S+G +YT++R K D + Y+P
Sbjct: 231 QVTTFGTILQPEIGESALSILPSWHAYERTVEYFLLSQGCTQIYTSIRYFKQDFKAYKPQ 290
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YMISVP ++E++Y +QKQ A ++ + L+ S Y +RI++G L+
Sbjct: 291 YMISVPRIWESIYEAVQKQFREQPANKQKLVNFLLSASQQYIENRRIFQGLTLSLKPASA 350
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S + L ARI +LWP+H LAEKLVY+K++ A G K +SGGGSL H+D F+
Sbjct: 351 S------EKLIARIKSILLWPVHALAEKLVYQKVREATGGRFKWAISGGGSLATHLDNFF 404
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E + + VGYGLTE+SPV+ RRP N+ GS G PI TEIKIVD ET + LPAG +G+
Sbjct: 405 EIANIGLLVGYGLTETSPVLTVRRPWHNLKGSAGQPIAQTEIKIVDPETRQQLPAGQRGL 464
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V RG Q+MQGY+ NP AT + +D +GW +TGD+GW+ P G L+L GRAK
Sbjct: 465 VLARGPQIMQGYYLNPQATAKVIDPEGWFDTGDLGWLTP----------GNDLILTGRAK 514
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVLS GEN+EP +E+A +RS I QI+++GQDQ+ GA+IVP+ E V K
Sbjct: 515 DTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQDQKSVGALIVPNAEAV---QKWAETQ 571
Query: 418 HADASELS-KEKTISLLY-GELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ E+ KTI L+ EL + + +IGP ++ EPF++
Sbjct: 572 NPPLHEIDWNSKTIQDLFRKELNREVQNRPGYRADDRIGPFRLIQEPFSI 621
>gi|427727828|ref|YP_007074065.1| AMP-forming long-chain acyl-CoA synthetase [Nostoc sp. PCC 7524]
gi|427363747|gb|AFY46468.1| AMP-forming long-chain acyl-CoA synthetase [Nostoc sp. PCC 7524]
Length = 658
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 181/419 (43%), Positives = 260/419 (62%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+++L +V + GD LS+LP WH YER+ YF+ S+G +YT +R++K DL+ ++P+
Sbjct: 227 QVKTLGTVVQPQPGDMVLSILPTWHSYERSGEYFLLSQGCTQVYTNLRSVKKDLKDFKPN 286
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+MI+VP ++E++Y G+QKQ A ++ + +L+ S Y KRI +G L
Sbjct: 287 FMIAVPRLWESIYEGVQKQFREQPAKKQRLIYSLLGASERYIKAKRIAQGLSLDH----- 341
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
V+ + L ARII + L+PLH L E+LVY K++ A G K +SGGG+LP HID F+
Sbjct: 342 -LHVSSMGRLGARIIASALFPLHALGERLVYGKVREATGGRIKQVISGGGALPRHIDNFF 400
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E IGV++ GYGLTE+SPV ARRP N+ GS G PI TE+KIVD ET + L AG +G+
Sbjct: 401 EIIGVEILQGYGLTETSPVTNARRPWHNLRGSSGQPIPGTEVKIVDPETRQPLAAGKRGL 460
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY++NP AT + +D +GW N+GD+GWI P++ LVL GRAK
Sbjct: 461 VLLRGPQVMQGYYQNPEATAKVIDAEGWFNSGDLGWITPYND----------LVLTGRAK 510
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV---LMAAKRL 414
DTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A R
Sbjct: 511 DTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRCIGALIVPNLEALEKWAEAQNRT 570
Query: 415 SIVHADASELSKEKTIS--------LLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
I + S +TI+ L EL + + ++GP ++ EPF++
Sbjct: 571 LITEDNNLTSSSGETITLESKMIQDLFRQELNREVQNRPGYRPDDRVGPFRLILEPFSI 629
>gi|428311361|ref|YP_007122338.1| AMP-forming long-chain acyl-CoA synthetase [Microcoleus sp. PCC
7113]
gi|428252973|gb|AFZ18932.1| AMP-forming long-chain acyl-CoA synthetase [Microcoleus sp. PCC
7113]
Length = 672
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 179/414 (43%), Positives = 255/414 (61%), Gaps = 39/414 (9%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYET 129
E GDK LS+LP WH YERA YFI S+G +YT +RN+K DL+ ++P M+ VP ++E+
Sbjct: 246 EPGDKVLSILPSWHAYERAVEYFILSQGCTQIYTNLRNVKKDLREFKPQLMVGVPRLWES 305
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y G+QKQ A ++ + + + +S Y +R+ +G L QPS I+ L
Sbjct: 306 IYEGVQKQFREQPANKQRLVQNFLNVSKRYIEARRLAQGLSL--GNLQPSA----IERLK 359
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
AR+ +LWP+H LA K+VY+K++ A G K +SGGGSL H+D F+E IGV+V VGY
Sbjct: 360 ARVQATVLWPVHQLANKIVYQKVREATGGQIKIVISGGGSLARHLDDFFEIIGVEVLVGY 419
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTE+SPV RRP N+ S G P+ TEI+IV+ ET ++LP G +G+V VRG QVMQG
Sbjct: 420 GLTETSPVTNVRRPWRNLRYSSGPPMPGTEIRIVNPETRQLLPQGQQGLVMVRGPQVMQG 479
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P AT +A+D DGW +TGD+GW+ P + LVL GRAKDTIVL+ GEN+
Sbjct: 480 YYKKPEATAKAIDADGWFDTGDLGWVTPENH----------LVLTGRAKDTIVLTNGENI 529
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM--AAKRLSIVHADAS---- 422
EP +E+A +RS+ I QI+++GQDQR GA+IVP+ E + AA+ L++ DA
Sbjct: 530 EPQPIEDACIRSAYIDQIMLVGQDQRSLGALIVPNLEALQQWAAAQNLNLRLPDAVSPQS 589
Query: 423 -----------ELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+L ++ SL EL + + +IG ++ EPF++
Sbjct: 590 AAPPEEFRTAIDLQSKEVQSLFRSELNREVKNRPGYRPDDRIGSFELILEPFSL 643
>gi|390440993|ref|ZP_10229181.1| Long-chain-fatty-acid CoA ligase [Microcystis sp. T1-4]
gi|389835698|emb|CCI33307.1| Long-chain-fatty-acid CoA ligase [Microcystis sp. T1-4]
Length = 639
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 180/418 (43%), Positives = 250/418 (59%), Gaps = 33/418 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I E GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P
Sbjct: 207 QVRNLNAIFQPEPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L P
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLHASP 326
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 327 G------ERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI- 416
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A+ I
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKIS 550
Query: 417 -----VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFT 459
+H+D +S+L +K ++L EL++ + QI ++ EPF+
Sbjct: 551 LNLPDLHSDRSTILSSDLYSKKVLALYQQELKREVRNRPGYRTDDQIKTFELILEPFS 608
>gi|427707121|ref|YP_007049498.1| long-chain-fatty-acid--CoA ligase [Nostoc sp. PCC 7107]
gi|427359626|gb|AFY42348.1| Long-chain-fatty-acid--CoA ligase [Nostoc sp. PCC 7107]
Length = 656
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/417 (42%), Positives = 259/417 (62%), Gaps = 31/417 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+RSL IV E GD LS+LP WH YER+ YF+ S+G +YT +R++K DL+ ++P+
Sbjct: 227 QVRSLRAIVQPEPGDIVLSILPSWHSYERSGEYFLLSQGCSQIYTNLRSVKRDLKEFKPN 286
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+MI+VP ++E++Y G+QKQ A+++ + L+ +S Y +RI +G CL
Sbjct: 287 FMIAVPRLWESIYEGVQKQFREQPASKQRLINFLVGMSEKYIKAQRIAQGLCLEHVN--- 343
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ I+ + A+I L PLH+L EK+VY K++ A G K +SGGG+LP HID F+
Sbjct: 344 ---ASAIERIGAKIQALALLPLHILGEKIVYAKVREATGGRIKHVISGGGALPRHIDNFF 400
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E IGV + GYGLTE+SPV ARRP N GS G PI TE+KIVD E + L G +G+
Sbjct: 401 EIIGVDILQGYGLTETSPVTNARRPWRNFRGSSGQPIPGTEVKIVDPENRQPLAKGQRGL 460
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V ++G Q+MQGY++NP AT +A+D +GW ++GD+GW+ P + LVL GRAK
Sbjct: 461 VLLKGPQIMQGYYQNPEATAKAIDAEGWFDSGDLGWVTPEND----------LVLTGRAK 510
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI- 416
DTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A ++
Sbjct: 511 DTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSIGALIVPNLEALEKWADSQNVQ 570
Query: 417 --VHADASELS-----KEKTISLLY-GELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ SELS + K I L+ EL + + +IGP ++ EPF++
Sbjct: 571 LRLPEQNSELSTSVDLESKIIQDLFRQELNREVQNRPGYRLDDRIGPFRLILEPFSI 627
>gi|434399935|ref|YP_007133939.1| Long-chain-fatty-acid--CoA ligase [Stanieria cyanosphaera PCC 7437]
gi|428271032|gb|AFZ36973.1| Long-chain-fatty-acid--CoA ligase [Stanieria cyanosphaera PCC 7437]
Length = 640
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/418 (40%), Positives = 254/418 (60%), Gaps = 33/418 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L I+ A+ GD+ LS+LP WH YER+ YF+F++G L YT +R+LK DLQ+YQPH
Sbjct: 207 QVNNLTSIIKADVGDRVLSILPSWHAYERSAEYFLFAQGCTLYYTNLRSLKSDLQKYQPH 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM++VP ++E++Y G+QKQ +++ + I+ Y +RI EG L
Sbjct: 267 YMVAVPRLWESIYEGVQKQFREQPPSKQKLINYFFEIAEEYIEARRIAEGMSLEH----- 321
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+++ L A+ ++L PL+ L +++V+KK++ A+G + K V+GGGSL H+D FY
Sbjct: 322 -LNLSVGARLLAKTKASLLLPLYNLGDRIVFKKVRQAVGSNVKTLVNGGGSLAKHLDDFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E + + + VGYGLTE+SPV AR N G+ G PI TEIKIVD +T + LP G +G+
Sbjct: 381 EIVKIPLLVGYGLTETSPVTNARTLKHNFRGTAGKPIPETEIKIVDPQTRQTLPQGQQGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+KNP AT +A+D +GW ++GD+GW+ P + L+L GRAK
Sbjct: 441 VLIRGPQVMQGYYKNPEATAKAIDPEGWFDSGDLGWVTPDND----------LILTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD-----------KEE 406
DTIVLS GEN+EP +E+A +RS I QI+++GQDQR GA+IVP+ K
Sbjct: 491 DTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQDQRALGALIVPNLDALQQWATNQKLN 550
Query: 407 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFT 459
+ + A S+ S+L + +L EL + +IG ++ EPF+
Sbjct: 551 LNLPAPNTSLAEISQSDLYSKPVQNLFRQELNSQVQNRPGYRADDRIGTFRLILEPFS 608
>gi|443321847|ref|ZP_21050887.1| AMP-forming long-chain acyl-CoA synthetase [Gloeocapsa sp. PCC
73106]
gi|442788463|gb|ELR98156.1| AMP-forming long-chain acyl-CoA synthetase [Gloeocapsa sp. PCC
73106]
Length = 633
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/413 (42%), Positives = 250/413 (60%), Gaps = 26/413 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L I+ E GDK LS+LP WH YERA Y+I S+G +YT +RN K DLQ++QP+
Sbjct: 209 QVNNLNTIIQPEPGDKVLSILPSWHSYERAAEYYILSQGCTQIYTNIRNFKQDLQKHQPN 268
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+MI VP ++E++Y GIQKQ+ R+ + + + IS +Y +RI +G L +
Sbjct: 269 FMIGVPRLWESIYEGIQKQLREQPQKRQKLVKTCLEISESYILARRIAQGLSLEHLEANW 328
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S D L A I L PLH +A++LVY+KI++ +G + + +SGGGSL MH++ FY
Sbjct: 329 S------DRLKAGIKATALAPLHQIADRLVYRKIRNGVGGNLRFLISGGGSLAMHLENFY 382
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +G+ + VGYGLTE+SPV AR+ N+ GS G P+ TEI+IVD ET + LP +G+
Sbjct: 383 EVVGIPILVGYGLTETSPVTNARQIEHNLRGSAGKPLPETEIRIVDLETKQDLPKKKRGL 442
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+ P AT +A+D GW +TGDIGW+ C LVL GRAK
Sbjct: 443 VLLRGPQVMQGYYHQPEATAKAIDASGWFDTGDIGWLT----------CDQDLVLTGRAK 492
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV----LMAAKR 413
DTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + + +
Sbjct: 493 DTIVLTNGENIEPQPIEDACLRSPYIEQIMLVGQDQRALGALIVPNLEALQQWAIASGLN 552
Query: 414 LSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 461
L L+ T L EL + + +IG V EPF+++
Sbjct: 553 LDFSTPGTQALNDAATQELFRRELNREVQNRPGYRSDDRIGAFAFVLEPFSLD 605
>gi|428780585|ref|YP_007172371.1| AMP-forming long-chain acyl-CoA synthetase [Dactylococcopsis salina
PCC 8305]
gi|428694864|gb|AFZ51014.1| AMP-forming long-chain acyl-CoA synthetase [Dactylococcopsis salina
PCC 8305]
Length = 636
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/348 (47%), Positives = 228/348 (65%), Gaps = 17/348 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L D++ + GD+ LS+LP WH YERA YF+ +RG ++ YT +R K DL+ +P+
Sbjct: 209 QVRTLGDVIQPQAGDRVLSILPSWHAYERAAEYFLLARGCQITYTNLRAFKKDLKEQKPN 268
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM+ VP ++E++Y GIQK + + ++ + + IS Y KRI E CL
Sbjct: 269 YMVGVPRLWESVYDGIQKTLNQQTGTKKKLVNFFLNISDRYIKAKRINERLCLE------ 322
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
++ ++ + L A + ++L PLH L +K+VY ++ A G + KA +SGGGSL +ID FY
Sbjct: 323 NFNPSVTEKLTASVQQSLLEPLHNLGDKVVYNTVREATGGNLKAVISGGGSLAKYIDDFY 382
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +G+ + VGYGLTE+SPV ARR N+ GS G I TE KIVD ET L G KG+
Sbjct: 383 EVVGIPLLVGYGLTETSPVTHARRLYHNLRGSAGQAIPETETKIVDPETKASLNDGEKGL 442
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG+QVMQGY+K P AT +A+D++GW NTGD+GWI P G LVL GRAK
Sbjct: 443 VMIRGTQVMQGYYKQPEATAKAIDQEGWFNTGDLGWITPT----------GDLVLTGRAK 492
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
DTIVLS GEN+EP LE+A LRS I QI+V+GQDQR GA+IVP+ E
Sbjct: 493 DTIVLSNGENIEPQPLEDACLRSVYIDQIIVLGQDQRCLGALIVPNVE 540
>gi|425470138|ref|ZP_18849008.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9701]
gi|389884320|emb|CCI35368.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9701]
Length = 639
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/419 (42%), Positives = 254/419 (60%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P
Sbjct: 207 QVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L P
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLHASP 326
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 327 G------ERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD ++ EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLQSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLS 415
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A ++LS
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKLS 550
Query: 416 I----VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ H+D +S+L +K ++L EL++ + QI ++ EPF++
Sbjct: 551 LNLPDAHSDRSTILSSDLYSKKVLALYQQELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|86609627|ref|YP_478389.1| long-chain-fatty-acid-CoA ligase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558169|gb|ABD03126.1| putative long-chain-fatty-acid-CoA ligase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 628
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 172/409 (42%), Positives = 250/409 (61%), Gaps = 22/409 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L +V + G+K L++LP WH YERAC YF+ SR L+YT+ R +K D Q+ PH
Sbjct: 205 QVENLGVVVQPQPGNKVLTILPTWHSYERACEYFLLSRACMLVYTSPRFIKQDFQQEHPH 264
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
++++VP ++ET+Y GIQ+Q S + + RAL+ +S ++ RI RNQ
Sbjct: 265 FLVAVPRIWETVYEGIQRQFKEKSPLMQRLIRALMAVSESHVLSGRI------ARNQSIL 318
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
Y V+ L AR+ +LWPLH LA+ L+Y+K++ A+G + + +SGGGSLP ++DLFY
Sbjct: 319 HYGVSPWVRLQARLQHWLLWPLHRLADALIYRKVRQALGPNFQHAISGGGSLPAYLDLFY 378
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +G+ + GYGLTE+SPV+ ARRP NV G+ G P+ TE +IVD ET + LP KG+
Sbjct: 379 EVVGISILNGYGLTETSPVLCARRPDNNVRGTAGPPLPGTEFRIVDPETRQPLPPREKGL 438
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
+ RG QVM GY+ NP AT + L DGW TGD+GW+ P G LV+ GRAK
Sbjct: 439 ILARGPQVMMGYYNNPEATAKVLSSDGWFETGDLGWLTPD----------GQLVITGRAK 488
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
D IVL GEN+EP LE+A L+S I QIV++GQDQ++ A+I P+ + + A I
Sbjct: 489 DVIVLLNGENIEPQPLEDACLQSPYISQIVIVGQDQKKLAALIYPNLDALKAWAAEQGIP 548
Query: 418 HADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 461
DA L++ +T +L+ E+R+ + Q+ + EP +V
Sbjct: 549 AEDAELLAQPQTRTLILQEVRRRIQERPGYRPDEQVSDFRFLPEPLSVE 597
>gi|440680365|ref|YP_007155160.1| Long-chain-fatty-acid--CoA ligase [Anabaena cylindrica PCC 7122]
gi|428677484|gb|AFZ56250.1| Long-chain-fatty-acid--CoA ligase [Anabaena cylindrica PCC 7122]
Length = 660
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/412 (41%), Positives = 254/412 (61%), Gaps = 26/412 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q++SL +V + G+ LS+LP WH YER+ YF+ S+G +YT +R +K DL++++P+
Sbjct: 235 QVKSLGTVVQPQKGNIVLSILPTWHSYERSGEYFLLSQGCTQIYTNLRAVKQDLKKFKPN 294
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YMI+VP ++E++Y G+QKQ A ++ + + L+ +S Y +RI +G L
Sbjct: 295 YMIAVPRLWESIYEGVQKQFREQPAKKQQLIQFLLDMSQKYITARRITQGLSLDHIHASS 354
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ L A+I LWP L EKLVY K++ A G K +SGGG+LP HID F+
Sbjct: 355 G------ERLGAKIREIALWPFQALGEKLVYAKVREATGGKIKQVISGGGALPRHIDNFF 408
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +GV++ GYGLTE+SPV ARRP N+ GS G PI TE+KIV+ ET + LP G +G+
Sbjct: 409 EIVGVEILQGYGLTETSPVTNARRPWRNLRGSSGQPIPGTEVKIVNPETRQPLPVGERGL 468
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V ++G Q+MQGY++NP ATK+ +D +GW ++GD+GW+ P + LVL GRAK
Sbjct: 469 VLLKGPQIMQGYYQNPEATKKVIDAEGWFDSGDLGWVTPQND----------LVLTGRAK 518
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRLS 415
DTIVL+ GEN+EP +E+A LRS + QI+++GQDQR GA+IVP+ E E +
Sbjct: 519 DTIVLTNGENIEPQPIEDACLRSPYVDQIMLVGQDQRSIGALIVPNLEALEKWAETQNDK 578
Query: 416 IVHADASELSKEKTI--SLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
I + + ++ E I L EL + + +IGP ++ EPF++
Sbjct: 579 ITASTSQKIDLESKIIQDLFRQELNREVKDRPGYRADDRIGPFKLILEPFSI 630
>gi|425465198|ref|ZP_18844508.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9809]
gi|389832583|emb|CCI23641.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9809]
Length = 639
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 179/418 (42%), Positives = 252/418 (60%), Gaps = 33/418 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P
Sbjct: 207 QVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKSDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDH----- 321
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 322 -LHASEIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI- 416
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A+ I
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKIS 550
Query: 417 -----VHAD-----ASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPFT 459
+H+D +S+L +K ++L EL++ + + QI ++ EPF+
Sbjct: 551 LNLPDLHSDRSTILSSDLYSKKVLALYQQELKREVRNRPSYRTDDQIKTFELILEPFS 608
>gi|166368626|ref|YP_001660899.1| long-chain-fatty-acid CoA ligase [Microcystis aeruginosa NIES-843]
gi|166090999|dbj|BAG05707.1| long-chain-fatty-acid CoA ligase [Microcystis aeruginosa NIES-843]
Length = 639
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 179/418 (42%), Positives = 252/418 (60%), Gaps = 33/418 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P
Sbjct: 207 QVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKSDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDH----- 321
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 322 -LHASEIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI- 416
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A+ I
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKIS 550
Query: 417 -----VHAD-----ASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPFT 459
+H+D +S+L +K ++L EL++ + + QI ++ EPF+
Sbjct: 551 LNLPDLHSDRSTILSSDLYSKKVLALYQQELKREVRNRPSYRTDDQIKTFELILEPFS 608
>gi|425448641|ref|ZP_18828485.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 7941]
gi|389768094|emb|CCI06699.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 7941]
Length = 639
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 179/419 (42%), Positives = 250/419 (59%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P
Sbjct: 207 QVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKSDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLH--- 323
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 324 ---ASEIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT +A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMQGYYKKPEATDKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI- 416
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A+ I
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKIS 550
Query: 417 -----VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+H+D +S+L +K + L EL++ + QI ++ EPF++
Sbjct: 551 LNLPDLHSDRSTILSSDLYSKKVLDLYQQELKREVRNRPGYRADDQIKTFELILEPFSL 609
>gi|443647067|ref|ZP_21129585.1| AMP-binding enzyme family protein [Microcystis aeruginosa
DIANCHI905]
gi|159030818|emb|CAO88497.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335613|gb|ELS50079.1| AMP-binding enzyme family protein [Microcystis aeruginosa
DIANCHI905]
Length = 639
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 180/419 (42%), Positives = 254/419 (60%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P
Sbjct: 207 QVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLH--- 323
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 324 ---ASGIERLKARIQSLLLYPLHAIGDKLVYSKIRQAVGNKVKILVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLS 415
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A ++LS
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAHEQKLS 550
Query: 416 I----VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ H+D +S+L +K ++L EL++ + QI ++ EPF++
Sbjct: 551 LNLPDAHSDRSTILSSDLYSKKVLALYQQELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|56750633|ref|YP_171334.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 6301]
gi|56685592|dbj|BAD78814.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 6301]
Length = 649
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 252/405 (62%), Gaps = 18/405 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L +V + GD LS+LP WH YERAC YF+ S+G +YT +RN+K D+++Y+P
Sbjct: 230 QVTTLGVVVQPQPGDTVLSILPTWHSYERACEYFLLSQGCTQVYTTLRNVKQDIRQYRPQ 289
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+M+SVP ++E++Y G+QKQ A +R + +S Y +R ++G L + P
Sbjct: 290 FMVSVPRLWESIYEGVQKQFREQPAKKRRLIDTFFGLSQRYVLARRRWQGLDLLALNQSP 349
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ +A R++ L PLH L ++LVY K++ A G + +SGGGSL +H+D F+
Sbjct: 350 AQRLAE----GVRMLA--LAPLHKLGDRLVYGKVREATGGRIRQVISGGGSLALHLDTFF 403
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +GV + VGYGLTE+SPV+ RRP N+ GS G PI T I+IVD ET E P+G +G+
Sbjct: 404 EIVGVDLLVGYGLTETSPVLTGRRPWHNLRGSAGQPIPGTAIRIVDPETKENRPSGDRGL 463
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +G Q+MQGYF P AT +A+D +GW +TGD+G+I G LVL GRAK
Sbjct: 464 VLAKGPQIMQGYFNKPEATAKAIDAEGWFDTGDLGYIVGE----------GNLVLTGRAK 513
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVL+ GEN+EP +E+A LRSS I QI+++GQD++ GA+IVP++E + + A I
Sbjct: 514 DTIVLTNGENIEPQPIEDACLRSSYISQIMLVGQDRKSLGALIVPNQEAIALWASEQGIS 573
Query: 418 HADASELSKEKTISLLYGELRKWTS-KCSFQIGPIHVVDEPFTVN 461
D + ++ L E+R + +IGP +++EPF++
Sbjct: 574 QTDLQGVVQKLIREELNREVRDRPGYRIDDRIGPFRLIEEPFSME 618
>gi|334117580|ref|ZP_08491671.1| Long-chain-fatty-acid--CoA ligase [Microcoleus vaginatus FGP-2]
gi|333460689|gb|EGK89297.1| Long-chain-fatty-acid--CoA ligase [Microcoleus vaginatus FGP-2]
Length = 649
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/410 (43%), Positives = 246/410 (60%), Gaps = 27/410 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L I+ E G+ LS+LP WH YER+ YF+ S+G +YT +R K D + Y+P
Sbjct: 231 QLTTLGTILQPEAGESALSILPSWHAYERSVEYFLLSQGCTQIYTNIRYFKQDFKTYKPQ 290
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM+SVP ++E++Y +QKQ ++ + L+ S Y +RI +G L+
Sbjct: 291 YMVSVPRIWESIYEAVQKQFREQPPNKQKLVDFLLSASQQYIETRRICQGLTLSLKPASG 350
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S + L AR +L P+H LAEKLVY+K++ A G K +SGGGSL HID F+
Sbjct: 351 S------EKLIARTKSILLSPVHALAEKLVYQKVREATGGRLKWAISGGGSLAAHIDNFF 404
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E + + VGYGLTE+SPV+ RRP N+ GS G P+ HTEIKIVD ET + LP G +G+
Sbjct: 405 EIANIGLLVGYGLTETSPVLTVRRPWHNLKGSAGQPLAHTEIKIVDPETRQQLPTGQRGL 464
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V RG Q+MQGY+ NP AT +A+D +GW +TGD+GW+ P G L+L GRAK
Sbjct: 465 VLARGPQIMQGYYLNPQATAKAIDPEGWFDTGDLGWLTP----------GNDLILTGRAK 514
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVLS GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E V K
Sbjct: 515 DTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSVGALIVPNAEAV---QKWAETQ 571
Query: 418 HADASELS-KEKTISLLY-GELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ E+ KTI L+ EL + + +IGP ++ EPF++
Sbjct: 572 NPPLHEIDWNSKTIQDLFRKELNREVQNRPGYRADDRIGPFRLIQEPFSM 621
>gi|428769075|ref|YP_007160865.1| long-chain-fatty-acid--CoA ligase [Cyanobacterium aponinum PCC
10605]
gi|428683354|gb|AFZ52821.1| Long-chain-fatty-acid--CoA ligase [Cyanobacterium aponinum PCC
10605]
Length = 642
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 179/420 (42%), Positives = 257/420 (61%), Gaps = 33/420 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ L I+ + GD+ LS+LP WH YERA YF+ SRG L+YT +R K DL++ +PH
Sbjct: 210 QVCHLDVILQPKKGDRILSILPSWHSYERAAEYFLLSRGTTLIYTNIRYFKQDLKKIKPH 269
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+MI VP ++E++Y G+QKQ S ++ + + S Y KRI G L P
Sbjct: 270 HMIGVPRLWESIYEGVQKQFRDGSKTQQKLVNFFLATSEKYIKAKRIKNGLDL--EHLNP 327
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFY 237
S L A+I +L P+H L +KL+Y K++ +G + VSGGGSL HID F+
Sbjct: 328 SSGQKLT----AKITSTLLLPVHKLGDKLIYTKVREGVGGCIQTWVSGGGSLAKHIDNFF 383
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
+ +G+ + VGYGLTE+SPV ARR + N++G+ G PI TEIKIV+ ET E LP G KG+
Sbjct: 384 QIVGIPLIVGYGLTETSPVTNARRISRNIVGASGQPIPETEIKIVNPETRETLPQGEKGL 443
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG+QVMQGY+KNP AT +A+DE+GW ++GD+GW+ P + LV+ GRAK
Sbjct: 444 VFIRGTQVMQGYYKNPEATTKAIDEEGWFDSGDLGWVTPDND----------LVITGRAK 493
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR---- 413
DTIVLS GEN+EP LE+A +RS I QI+V+GQDQ+ GA+IVP+ E + +
Sbjct: 494 DTIVLSNGENIEPQPLEDACVRSPYIDQIMVVGQDQKYLGALIVPNLEALQKWGEEQNRI 553
Query: 414 --LSIVHADASELSKEK-----TISLLYGEL-RKWTSKCSFQIGP----IHVVDEPFTVN 461
L V A+ +E+ K +SL EL R+ ++ ++I ++ EPF+++
Sbjct: 554 LNLPSVGANRAEIEKSDLYSSGVLSLYKQELAREVKNRPGYRIDDRISVFELILEPFSID 613
>gi|119510427|ref|ZP_01629561.1| hypothetical protein N9414_18935 [Nodularia spumigena CCY9414]
gi|119464956|gb|EAW45859.1| hypothetical protein N9414_18935 [Nodularia spumigena CCY9414]
Length = 658
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/418 (41%), Positives = 261/418 (62%), Gaps = 32/418 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+++L +V + GD LS+LP WH YER+ YF+ S+G +YT +R++K DL++++PH
Sbjct: 227 QVKTLGTVVQPQPGDVILSILPSWHSYERSGEYFLLSQGCTQVYTNLRSVKQDLKKFKPH 286
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YMI+VP ++E+++ G+ KQ A ++ + L+ +S Y +RI +G L N
Sbjct: 287 YMIAVPRLWESIHEGVLKQFREQPANKQRLINFLLGMSETYIQKQRIAQGLSL--NHLHA 344
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S L + ++I+ +L P H L E+LVY K++ A+G K ++GGG+LP HID F+
Sbjct: 345 SSL----EKFASKIVALVLLPFHALGERLVYAKVREAVGGRMKHVITGGGALPRHIDTFF 400
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E I V++ GYGLTE+SPV ARRP NV GS G PI TE+KIVD ET LP G +G+
Sbjct: 401 EIISVEILQGYGLTETSPVTNARRPWHNVRGSSGQPIAGTEVKIVDPETKVPLPLGERGL 460
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V ++G Q+MQGY++NP AT + +D +GW N+GD+GW+ P + LVL GRAK
Sbjct: 461 VLLKGPQIMQGYYQNPEATAKVIDAEGWFNSGDLGWVTPEND----------LVLTGRAK 510
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK----R 413
DTIVL+ GEN+EP +E+A LRS + QI+++GQDQR GA+IVP+ E + A +
Sbjct: 511 DTIVLTNGENIEPQPIEDACLRSPYVDQIMLVGQDQRSIGALIVPNTEALKTWASSQNLQ 570
Query: 414 LSIVHADASELS-----KEKTISLLY-GELRKWTS-----KCSFQIGPIHVVDEPFTV 460
L ++ ++ E+S + K I L+ EL + + ++GP ++ EPF++
Sbjct: 571 LPLLQENSPEISTSIDLESKMIQDLFRQELNREVQNRPGYRADDRVGPFRLILEPFSM 628
>gi|440754872|ref|ZP_20934074.1| AMP-binding enzyme family protein [Microcystis aeruginosa TAIHU98]
gi|440175078|gb|ELP54447.1| AMP-binding enzyme family protein [Microcystis aeruginosa TAIHU98]
Length = 639
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/419 (42%), Positives = 253/419 (60%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P
Sbjct: 207 QVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSENYVIAKRIADNLSLDHLH--- 323
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 324 ---ASGIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLS 415
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A ++LS
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKLS 550
Query: 416 I----VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ H+D +S+L +K + L EL++ + QI ++ EPF++
Sbjct: 551 LNLPDPHSDRSTILSSDLYSKKVLDLYQQELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|425438549|ref|ZP_18818893.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9717]
gi|389718106|emb|CCH97904.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9717]
Length = 639
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 179/418 (42%), Positives = 253/418 (60%), Gaps = 33/418 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P
Sbjct: 207 QVRHLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ A ++ + R L+ S Y KRI + L
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSEQPATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLH--- 323
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 324 ---ASGIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLS 415
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A ++LS
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKLS 550
Query: 416 I----VHAD-----ASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPFT 459
+ +H+D +S+L +K ++L EL++ + + QI ++ EPF+
Sbjct: 551 LNLPDLHSDRSMILSSDLYSKKVLALYQQELKREVRNRPSYRADDQIKTFELILEPFS 608
>gi|86604864|ref|YP_473627.1| long-chain-fatty-acid-CoA ligase-like protein [Synechococcus sp.
JA-3-3Ab]
gi|86553406|gb|ABC98364.1| long-chain-fatty-acid-CoA ligase-like protein [Synechococcus sp.
JA-3-3Ab]
Length = 626
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 173/409 (42%), Positives = 244/409 (59%), Gaps = 22/409 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L+ +V GDK L++LP WH YERAC YF+ S+ L+YT R +K D Q+ QPH
Sbjct: 203 QVENLHVVVQPRPGDKVLTILPTWHSYERACEYFLLSQACTLVYTNPRFIKQDFQQEQPH 262
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+++VP ++ET+Y GIQ+Q S + + R L+ S Y RI N+
Sbjct: 263 YLVAVPRIWETVYEGIQRQFKEKSPLMQRLIRTLMAASEGYVLAGRI------AGNRSIL 316
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
Y V+ L AR+ +LWP+H LA+ L+Y+K++ A+G + + +SGGGSLP ++DLFY
Sbjct: 317 HYGVSPWVRLGARLQQGLLWPVHRLADALIYRKVRQALGPNFQQAISGGGSLPAYLDLFY 376
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +G+ + GYGLTE+SPV+ ARRP NV G+ G P+ TE +IVD ET + LP G KG+
Sbjct: 377 EVVGISILNGYGLTETSPVLCARRPDNNVRGTAGPPLPGTEFRIVDPETRQPLPPGEKGL 436
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
+ RG QVM GY+ NP AT + L DGW TGD+GW+ P G LV+ GRAK
Sbjct: 437 ILARGPQVMMGYYNNPEATAKVLSPDGWFETGDLGWLTPD----------GQLVITGRAK 486
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
D IVL GENVEP LE+A L+S I QIV++GQDQ++ A+I P+ + + A I
Sbjct: 487 DVIVLLNGENVEPQPLEDACLQSPYISQIVIVGQDQKKLAALIYPNLDVLKAWAAEQGIP 546
Query: 418 HADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 461
A+A L + +L+ E+R + QI + EP +V
Sbjct: 547 AAEAELLGHPQVRTLILQEVRARIQERPGYRPHEQIADFRFLPEPLSVE 595
>gi|425454194|ref|ZP_18833940.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9807]
gi|389805196|emb|CCI15162.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9807]
Length = 639
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 177/419 (42%), Positives = 253/419 (60%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P
Sbjct: 207 QVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ A ++ + + + S Y KRI + L P
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSQQPAKKQKLVQFFLEKSEKYVIAKRIADNLSLDHLHASP 326
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ + L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 327 T------ERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKIFVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLS 415
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A ++LS
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKLS 550
Query: 416 I----VHAD-----ASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPFTV 460
+ +H+D +S+L +K + L EL++ + + QI ++ EPF++
Sbjct: 551 LNLPDLHSDRSTILSSDLYSKKVLDLYQQELKREVRNRPSYRTDDQIKTFELILEPFSL 609
>gi|425460505|ref|ZP_18839986.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9808]
gi|389826794|emb|CCI22432.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9808]
Length = 639
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 178/419 (42%), Positives = 253/419 (60%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I + GD+ LS+LP WH YER+C YFI ++G +YT++R K DL+++ P
Sbjct: 207 QVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFILAQGCTQIYTSIRTFKQDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ A ++ + + + S Y KRI + L
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSQQPAKKQKLVQFFLEKSEKYVIAKRIADNLSLDHLH--- 323
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 324 ---ASGIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLS 415
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A ++LS
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKLS 550
Query: 416 I----VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ H+D +S+L +K ++L EL++ + QI ++ EPF++
Sbjct: 551 LNLPDAHSDRSTILSSDLYSKKVLALYQQELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|414079435|ref|YP_007000859.1| AMP-dependent synthetase and ligase [Anabaena sp. 90]
gi|413972714|gb|AFW96802.1| AMP-dependent synthetase and ligase [Anabaena sp. 90]
Length = 654
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/410 (41%), Positives = 262/410 (63%), Gaps = 28/410 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q++SL +V + GD LS+LP WH YER+ YF+ S+G +YT +R++K DL++++P+
Sbjct: 235 QVKSLGVVVQPKKGDTVLSILPTWHSYERSGEYFLLSQGCTQIYTNLRSVKGDLKKFKPN 294
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YMI+VP ++E++Y G+QKQ A ++ + + L+ S Y +RI +G L N
Sbjct: 295 YMIAVPRLWESIYEGVQKQFREQPAKKQSLVKFLLETSQKYIEARRICQGLSL--NHIHA 352
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S+ I+ A+I L H L EKLVY K++ A G + K +SGGG+LP +ID F+
Sbjct: 353 SF----IERSQAKITELGLLLFHALGEKLVYTKVREATGGNIKHVISGGGALPAYIDNFF 408
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +GV++ GYGLTE+SPV ARRP N+ GS G PI TE+KIV+ ET + LP G +G+
Sbjct: 409 EIVGVEILQGYGLTETSPVTNARRPWRNLRGSSGQPIPGTEVKIVNPETRQPLPVGERGL 468
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V ++G Q+MQGY++NP AT +A+D +GW ++GD+GW+ P + LVL GRAK
Sbjct: 469 VLLKGPQIMQGYYQNPEATTKAIDTEGWFDSGDLGWVTPEND----------LVLTGRAK 518
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ L A ++ +
Sbjct: 519 DTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSIGALIVPN----LEALEKWAET 574
Query: 418 HADASELSKEKTI--SLLYGEL-RKWTSKCSF----QIGPIHVVDEPFTV 460
++ ++ E I L EL R+ ++ S+ ++GP +++E F++
Sbjct: 575 QNNSQKIDLESKIVQDLFRQELNREVQNRPSYRADDRVGPFKLIEEEFSI 624
>gi|425443867|ref|ZP_18823930.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9443]
gi|389733516|emb|CCI02743.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9443]
Length = 639
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/419 (42%), Positives = 252/419 (60%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P
Sbjct: 207 QVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ A ++ + + + S Y KRI + L P
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSQQPAKKQKLVQFFLEKSEKYVIAKRIADNLSLDHLHASP 326
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 327 G------ERLKARIQSLLLYPLHAIGDKLVYSKIRQAVGNKVKIFVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVLQTEISIVDLHSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVM+GY+K P AT++A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMRGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLS 415
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A ++LS
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKLS 550
Query: 416 I----VHAD-----ASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPFTV 460
+ +H+D +S+L +K + L EL++ + + QI ++ EPF++
Sbjct: 551 LNLPDLHSDRSTILSSDLYSKKVLDLYQQELKREVRNRPSYRTDDQIKTFELILEPFSL 609
>gi|428224633|ref|YP_007108730.1| AMP-dependent synthetase and ligase [Geitlerinema sp. PCC 7407]
gi|427984534|gb|AFY65678.1| AMP-dependent synthetase and ligase [Geitlerinema sp. PCC 7407]
Length = 655
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/411 (41%), Positives = 257/411 (62%), Gaps = 24/411 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L +V + GD+ L++LP WH + R YF+ ++G +YT++R++K D ++++P
Sbjct: 233 QITTLGVVVQPKPGDRVLTLLPTWHSFGRVGEYFLLAQGCTQIYTSIRHVKADFRKHKPQ 292
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+M+ VP ++E++Y G+QKQ +R+ + L+ S Y KR+ +G L+ +QP
Sbjct: 293 FMVGVPRLWESIYEGVQKQFREQPESRQKLINTLLDFSRQYVEAKRVAQGLLLS--AEQP 350
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFY 237
L I A + A WPLH L E+LVY+K++ A G V SGGGSL MH+++F+
Sbjct: 351 GGLAKAI----ASLKAAAFWPLHQLGERLVYRKVREATGGELTCVISGGGSLAMHLEMFF 406
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +GV V VGYGLTE+SPV++ARR N+ GS G PI T +KIVD ET + L G +G+
Sbjct: 407 EIVGVDVLVGYGLTETSPVLSARRSWHNLRGSSGRPIPGTALKIVDPETRQPLAFGDRGL 466
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +G Q+M GYF+NP+AT +A+D +GW +TGD+GW+ P++ LVL GRAK
Sbjct: 467 VLAQGPQIMGGYFRNPTATAKAIDPEGWFDTGDLGWMTPNYD----------LVLTGRAK 516
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVL+ GEN+EP +E+A LRS+ I QI+++GQDQ+ GA+IVP+ E + A I
Sbjct: 517 DTIVLTNGENIEPQPIEDACLRSAYIDQIMLVGQDQKSLGALIVPNLEALQQWALGAGIT 576
Query: 418 HA-DAS-ELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 461
+ DAS +L K L+ EL + + +IGP ++ EPF+V
Sbjct: 577 SSPDASPDLQHPKVQELIRQELNREVRDRPGYRPDDRIGPFRLMAEPFSVE 627
>gi|220910327|ref|YP_002485638.1| AMP-dependent synthetase/ligase [Cyanothece sp. PCC 7425]
gi|219866938|gb|ACL47277.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7425]
Length = 684
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/419 (42%), Positives = 257/419 (61%), Gaps = 32/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ SL ++ + GD+ LS+LP WH YERAC YF+FS G +YT +R++K D++R +P
Sbjct: 254 QVTSLGTVIQPQAGDRVLSILPTWHSYERACEYFLFSLGCTQIYTNLRHIKQDIKRVKPQ 313
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM++VP ++E++Y G+Q+Q A+++ + + IS Y R+ G L + P
Sbjct: 314 YMVAVPRLWESIYEGVQRQFREQPASKQKLINFFLGISQRYIKASRLRAGLDL--DNLHP 371
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFY 237
S L+ A+I +L PLH L EK+VY+K++ A G K +SGGGSL H+++FY
Sbjct: 372 SGGQKLL----AQIQVLLLRPLHQLGEKIVYQKVREATGGCLKQVISGGGSLARHLEVFY 427
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E IGV++ VGYGLTE+SPV+ ARRP N+ GS G P+ +TEIKIVD E+ L G KG+
Sbjct: 428 EMIGVEILVGYGLTETSPVLTARRPWENLRGSAGKPVPYTEIKIVDPESRATLSLGEKGL 487
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V RG Q+MQGY+ P AT + LD +GW +TGD+GW+ LVL GR K
Sbjct: 488 VMARGPQIMQGYYGKPEATAKVLDSEGWFDTGDVGWLTDRQD----------LVLTGRQK 537
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRLS 415
DTIVL+ GEN+EP +E+A LRS+ I QI+++GQDQR GA+IVP+ E E A++ +
Sbjct: 538 DTIVLTNGENIEPQPIEDACLRSAYIDQIMLVGQDQRVLGALIVPNLEALEQWAASQNYA 597
Query: 416 IVHADASELSKEKTISL-------LYGEL--RKWTSKCSF----QIGPIHVVDEPFTVN 461
+ D +K + I L LY + R+ ++ F +IGP + EPF++
Sbjct: 598 LKLPDREPQTKGEMIDLDSKPVQDLYRQELNREVKNRPGFRIDDRIGPFKFILEPFSIE 656
>gi|81299727|ref|YP_399935.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 7942]
gi|81168608|gb|ABB56948.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 7942]
Length = 649
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/405 (41%), Positives = 251/405 (61%), Gaps = 18/405 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L +V + GD LS+LP WH YERAC YF+ S+G +YT +RN+K D+++Y+P
Sbjct: 230 QVTTLGVVVQPQPGDTVLSILPTWHSYERACEYFLLSQGCTQVYTTLRNVKQDIRQYRPQ 289
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+M+SV ++E++Y G+QKQ A +R + +S Y +R ++G L + P
Sbjct: 290 FMVSVLRLWESIYEGVQKQFREQPAKKRRLIDTFFGLSQRYVLARRRWQGLDLLALNQSP 349
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ +A R++ L PLH L ++LVY K++ A G + +SGGGSL +H+D F+
Sbjct: 350 AQRLAE----GVRMLA--LAPLHKLGDRLVYGKVREATGGRIRQVISGGGSLALHLDTFF 403
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +GV + VGYGLTE+SPV+ RRP N+ GS G PI T I+IVD ET E P+G +G+
Sbjct: 404 EIVGVDLLVGYGLTETSPVLTGRRPWHNLRGSAGQPIPGTAIRIVDPETKENRPSGDRGL 463
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +G Q+MQGYF P AT +A+D +GW +TGD+G+I G LVL GRAK
Sbjct: 464 VLAKGPQIMQGYFNKPEATAKAIDAEGWFDTGDLGYIVGE----------GNLVLTGRAK 513
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVL+ GEN+EP +E+A LRSS I QI+++GQD++ GA+IVP++E + + A I
Sbjct: 514 DTIVLTNGENIEPQPIEDACLRSSYISQIMLVGQDRKSLGALIVPNQEAIALWASEQGIS 573
Query: 418 HADASELSKEKTISLLYGELRKWTS-KCSFQIGPIHVVDEPFTVN 461
D + ++ L E+R + +IGP +++EPF++
Sbjct: 574 QTDLQGVVQKLIREELNREVRDRPGYRIDDRIGPFRLIEEPFSME 618
>gi|126659901|ref|ZP_01731025.1| long-chain-fatty-acid CoA ligase [Cyanothece sp. CCY0110]
gi|126618765|gb|EAZ89510.1| long-chain-fatty-acid CoA ligase [Cyanothece sp. CCY0110]
Length = 638
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 177/422 (41%), Positives = 253/422 (59%), Gaps = 39/422 (9%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L ++ + GDK LS+LP WH YER+ YF+ S+G L+YT +RN K DL++++PH
Sbjct: 206 QVRNLNAVIQPQPGDKVLSILPSWHAYERSGEYFLLSQGCTLIYTNIRNFKTDLKKFKPH 265
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+M+ VP ++++LY GIQKQ S ++ + IS + +RI L
Sbjct: 266 HMVGVPRLWDSLYEGIQKQFREQSPTQQKIVEFFFNISRTFILSRRIANNMSLEH----- 320
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ + I+ AR+ ++L PLH L +KLVYKKI+ +G + + VSGGGSL H+D FY
Sbjct: 321 -FDASAIERSIARLKASLLAPLHSLGDKLVYKKIREGLGGNFETLVSGGGSLAKHLDDFY 379
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E I V V VGYGLTE++PV AR + N+ GS G PI TEIKIVD +T E L G KG+
Sbjct: 380 EIINVPVLVGYGLTETAPVTNARTHSHNLRGSSGQPIPKTEIKIVDLDTREPLSQGKKGV 439
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG Q+MQGY+K P AT +A++ +GW ++GD+GWI P + LV+ GRAK
Sbjct: 440 VLLRGPQIMQGYYKKPEATAKAINPEGWFDSGDLGWITPMND----------LVITGRAK 489
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--------DKEEVLM 409
DTIVLS GEN+EP +E+A +RS I Q++++GQDQ+ GA+IVP DK + L
Sbjct: 490 DTIVLSNGENIEPQPIEDACIRSPYIDQMMLVGQDQKALGALIVPNLDALQTWDKNQQLN 549
Query: 410 ------AAKRLSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPF 458
A R +IV++D L + L EL + + QI ++ EPF
Sbjct: 550 LTFPPEDASREAIVNSD---LYGKPVQDLFKQELNREVKNRPGYRADDQIKAFELILEPF 606
Query: 459 TV 460
+V
Sbjct: 607 SV 608
>gi|170077298|ref|YP_001733936.1| long-chain-fatty-acid CoA ligase [Synechococcus sp. PCC 7002]
gi|169884967|gb|ACA98680.1| long-chain-fatty-acid CoA ligase (AMP-forming) [Synechococcus sp.
PCC 7002]
Length = 647
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 222/349 (63%), Gaps = 17/349 (4%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
+Q+R+L ++ GD LS+LP WH YERA YF+ S+G +YT +RN+K DLQ Y+P
Sbjct: 213 YQVRNLDQVIQPNPGDVTLSILPTWHSYERAAEYFLLSQGCTQIYTNIRNIKKDLQTYKP 272
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
YM++VP ++E++Y G+QK + A ++ + + S Y +RI L
Sbjct: 273 GYMVAVPRIWESIYEGVQKNLREQPAKKQKLVNFFLTCSQNYVLAQRIANNLSLEH---- 328
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 236
+ V+ + L AR L+P HLL KLVY+KI+ A G + +SGGGSL HID F
Sbjct: 329 --FHVSSLTRLMARAKAIALYPFHLLGNKLVYEKIRGATGGKIRYVISGGGSLAQHIDTF 386
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+E +G+ + VGYGLTE+SPV ARRP NV GS G + TEI+IVD ET + L G KG
Sbjct: 387 FEIVGINILVGYGLTETSPVTNARRPERNVCGSAGPALKGTEIRIVDPETRQTLSQGQKG 446
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+V +RG QVMQGY++ P AT +A+D +GW ++GD+GW+ P G LVL GRA
Sbjct: 447 LVLIRGPQVMQGYYRKPEATAKAIDPEGWFDSGDLGWVTPQ----------GDLVLTGRA 496
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
KDTIVL+ GEN+EP +E+A RS I QI+++GQDQ+ GA+IVP+ E
Sbjct: 497 KDTIVLTNGENIEPQPIEDACARSPYIDQIMLVGQDQKSLGALIVPNLE 545
>gi|428201789|ref|YP_007080378.1| AMP-forming long-chain acyl-CoA synthetase [Pleurocapsa sp. PCC
7327]
gi|427979221|gb|AFY76821.1| AMP-forming long-chain acyl-CoA synthetase [Pleurocapsa sp. PCC
7327]
Length = 638
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 164/348 (47%), Positives = 226/348 (64%), Gaps = 17/348 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L ++ E GD+ LS+LP WH YER+ YFI S G +YT +R+ K+DL+R++PH
Sbjct: 206 QVTNLIAVLQPEPGDRVLSILPSWHCYERSGEYFILSHGCTQIYTNIRSFKNDLKRFKPH 265
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YMI VP ++E+LY +QKQ+ +++ +A + IS Y KR +G L P
Sbjct: 266 YMIGVPRLWESLYEAVQKQLREQPESKQRLANFFLGISTRYIMAKRTEQGLNL--ENLNP 323
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S + A+I +L PLH L ++LVY+KI+ A G + K +SGGG+L MH+D FY
Sbjct: 324 SG----GERFMAKITANLLAPLHALGDRLVYQKIRQATGGNVKTLISGGGALAMHLDNFY 379
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E IGV + VGYGLTE+SPV AR N+ GS G PI TEI+IVD +T + LP KGI
Sbjct: 380 EIIGVPLVVGYGLTETSPVTNARTLKHNLRGSAGKPIPETEIRIVDPDTRQTLPPTQKGI 439
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT + +D +GW ++GD+GW+ P + LVL GRAK
Sbjct: 440 VLIRGPQVMQGYYKKPEATAKVIDAEGWFDSGDLGWVTPAND----------LVLTGRAK 489
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
DTIVLS GEN+EP +E+A +RS I QI+++GQDQ+ GA+IVP+ E
Sbjct: 490 DTIVLSNGENIEPQPIEDACIRSPYIDQIMLVGQDQKALGALIVPNLE 537
>gi|425437694|ref|ZP_18818109.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9432]
gi|389677326|emb|CCH93752.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9432]
Length = 639
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 176/419 (42%), Positives = 251/419 (59%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P
Sbjct: 207 QVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E+LY GIQKQ A ++ + + + S Y KRI + L
Sbjct: 267 LMVGVPRLWESLYEGIQKQFSQQPAKKQKLVQFFLEKSEKYVIAKRIADNLSLDH----- 321
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FY
Sbjct: 322 -LHASGIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFY 380
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+
Sbjct: 381 EIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGL 440
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAK
Sbjct: 441 VLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAK 490
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLS 415
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + + ++LS
Sbjct: 491 DTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWVQEQKLS 550
Query: 416 I----VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ H+D +S+L +K + L EL++ + QI ++ EPF++
Sbjct: 551 LNLPDPHSDRSTILSSDLYSKKVLDLYQQELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|357462837|ref|XP_003601700.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355490748|gb|AES71951.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 522
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/208 (71%), Positives = 174/208 (83%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI+ DIVPAE GD+FLSMLPPWH YERAC YFIFS G++ +YT VRNLKDDL+RYQPH
Sbjct: 311 QIKFYSDIVPAEVGDRFLSMLPPWHAYERACEYFIFSCGVDQVYTTVRNLKDDLERYQPH 370
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVPLVYE+LYSGIQ+QI TSS R++VA IR+S Y KRIYEG CLT+NQK P
Sbjct: 371 YLISVPLVYESLYSGIQRQISTSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKNQKSP 430
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
SYL A++DWL ARII IL+P+H+LA+KLVY KI SAIG SKAG+SGGGSLP H+D F+E
Sbjct: 431 SYLYAMLDWLGARIIATILFPIHMLAKKLVYSKIHSAIGFSKAGISGGGSLPSHVDRFFE 490
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNV 266
AIGV +Q GYGLTE+SPVIAARR +CNV
Sbjct: 491 AIGVTLQNGYGLTETSPVIAARRLSCNV 518
>gi|67921002|ref|ZP_00514521.1| AMP-dependent synthetase and ligase [Crocosphaera watsonii WH 8501]
gi|416380779|ref|ZP_11684127.1| Long-chain-fatty-acid--CoA ligase [Crocosphaera watsonii WH 0003]
gi|67857119|gb|EAM52359.1| AMP-dependent synthetase and ligase [Crocosphaera watsonii WH 8501]
gi|357265616|gb|EHJ14357.1| Long-chain-fatty-acid--CoA ligase [Crocosphaera watsonii WH 0003]
Length = 638
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/381 (43%), Positives = 242/381 (63%), Gaps = 19/381 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+++L ++ + GD+ LS+LP WH YER+ YF+ S+G L+YT +RN K D++R++P
Sbjct: 206 QVKNLDAVIQPKVGDQVLSILPSWHSYERSAEYFLLSQGCTLVYTNIRNFKTDIKRFKPQ 265
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+M+ VP +++++Y GIQKQ+ S ++ +A+ IS + +RI + L
Sbjct: 266 HMVGVPRLWDSIYEGIQKQLREKSDTQQKIAQFFFNISQNFILSRRIADNMSLEH----- 320
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ + ID A++ L PLH L +KLVY KI+ +G + + +SGGGSL H+D FY
Sbjct: 321 -FDASAIDRFIAKLKTIFLAPLHGLGDKLVYSKIREGLGGNFETLMSGGGSLAKHLDDFY 379
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E I V V VGYGLTE+SPV AR + N+ GS G PI HTEIKIVD +T E + G +G+
Sbjct: 380 EIINVPVLVGYGLTETSPVSNARTHSHNLRGSSGQPIPHTEIKIVDLDTGEAVSRGKRGV 439
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT +A+D +GW N+GD+GWI P + LV+ GRAK
Sbjct: 440 VLIRGPQVMQGYYKKPEATAKAIDPEGWFNSGDLGWITPMND----------LVITGRAK 489
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVL+ GEN+EP +E+A +RS I Q++++GQDQ+ GA+IVP+ + + K +
Sbjct: 490 DTIVLNNGENIEPQPIEDACVRSPYIDQMMLVGQDQKALGALIVPNLDALQTWGKNQQLN 549
Query: 418 HADASELSKEKTI--SLLYGE 436
SE + +TI S LYG+
Sbjct: 550 LTFPSEDASRETIINSDLYGK 570
>gi|158338658|ref|YP_001519835.1| long-chain-fatty-acid-CoA ligase [Acaryochloris marina MBIC11017]
gi|158308899|gb|ABW30516.1| long-chain-fatty-acid-CoA ligase, putative [Acaryochloris marina
MBIC11017]
Length = 646
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/376 (44%), Positives = 233/376 (61%), Gaps = 19/376 (5%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I ++ V E GD+ LS+LP WH + R Y+ S+G +YT++RNLK DLQ Y+PHY
Sbjct: 217 ITAMPAAVQPEVGDRILSILPTWHSFGRLVDYYFLSQGCTQIYTSIRNLKGDLQTYKPHY 276
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
M SVP ++E+LY G+QK+ A R+ + IS Y +R +G + N PS
Sbjct: 277 MGSVPRLWESLYEGMQKKFRGEPATRQKLINTFFGISQKYILARRTQQGLDI--NNLNPS 334
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 238
L + A++ L PLH L +++VY KI+ A+G K SGGGSL MH++ F+E
Sbjct: 335 GLQRFL----AQLQMLFLGPLHQLGDRIVYTKIRQAMGGQFKQSFSGGGSLAMHLETFFE 390
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
A+G+++ VGYGLTE+SPV+ +RR N+ S G PI TEI+IVD +T + LP G +G+V
Sbjct: 391 AVGIELIVGYGLTETSPVLTSRRAEHNLRRSAGKPIPKTEIRIVDPQTRQTLPTGQQGLV 450
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
VRG QVMQGY++NP AT + +D++GW +TGD+GW+ P LVL GRAKD
Sbjct: 451 IVRGPQVMQGYYQNPEATAKVIDQEGWFDTGDLGWLTPTQD----------LVLTGRAKD 500
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMAAKRLSI 416
TIVLS GEN+EP LE+A RSS I QI+V+GQDQR GA+IVP D + + + SI
Sbjct: 501 TIVLSNGENIEPQPLEDACARSSFIDQIMVVGQDQRSLGALIVPNLDALQQWASEQNASI 560
Query: 417 VHADASELSKEKTISL 432
H + K ++
Sbjct: 561 QHPGNTPTPGSKVLTF 576
>gi|354566187|ref|ZP_08985360.1| Long-chain-fatty-acid--CoA ligase [Fischerella sp. JSC-11]
gi|353546695|gb|EHC16143.1| Long-chain-fatty-acid--CoA ligase [Fischerella sp. JSC-11]
Length = 659
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/419 (42%), Positives = 253/419 (60%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI ++ +V GD LS+LP WH YER+C YF+ S+G +YT +R++K DL+ YQPH
Sbjct: 227 QIVAIPVVVQPRPGDIVLSILPTWHSYERSCEYFLLSQGCTQVYTNLRSIKRDLKEYQPH 286
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM++VP + E++Y G QKQ A+R+ + I Y +R G L P
Sbjct: 287 YMVAVPRLLESIYEGAQKQFREQPASRQRLINFFFEIGEKYIKARRTLTGLNL--ENLNP 344
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S + D L A + A L PL+ L EKLVY K++ A G K +SGGG+LP H+D F+
Sbjct: 345 S----MGDRLTASLQVAALSPLYALGEKLVYSKVREATGGRVKQMISGGGALPKHVDDFF 400
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +GV++ VGYGLTE+SPV ARR N+ G+ G PI TE KIVD ET + LP G +G+
Sbjct: 401 EILGVEILVGYGLTETSPVTHARRHWRNLRGAAGQPIPGTETKIVDPETKKELPTGERGL 460
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG Q+MQGY++NP AT +A+D +GW ++GD+GW+ P + L+L GRAK
Sbjct: 461 VLLRGPQIMQGYYQNPEATAKAIDPEGWFDSGDLGWVTPQND----------LILTGRAK 510
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRL- 414
DTIVL+ GEN+EP +E+A LRS I QI+++GQD++ GA+IVP+ E E A+ L
Sbjct: 511 DTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDRKSLGALIVPNLEALEKWAASGNLQ 570
Query: 415 ------SIVHADASELSKEKTI--SLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
++ A + +++ E I L EL + + +IGP ++ EPF++
Sbjct: 571 LTIEDENVTAATSQKINLESKIIQDLFRQELNREVQNRPGYRPDDRIGPFKLILEPFSI 629
>gi|434406627|ref|YP_007149512.1| AMP-forming long-chain acyl-CoA synthetase [Cylindrospermum
stagnale PCC 7417]
gi|428260882|gb|AFZ26832.1| AMP-forming long-chain acyl-CoA synthetase [Cylindrospermum
stagnale PCC 7417]
Length = 658
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/419 (40%), Positives = 257/419 (61%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+++L +V + GDK LS+LP WH YER+ YF+ S+G E +YT +R++K DL++++P
Sbjct: 227 QVKALGAVVQPQVGDKVLSILPSWHSYERSGEYFLLSQGCEQIYTNLRSVKADLKKFKPR 286
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+MI+VP ++E++Y G+QKQ A ++ + + L+ IS Y RI E L
Sbjct: 287 FMIAVPRLWESIYEGVQKQFREQPANKQRLIKFLLGISEKYIKAGRIAENLSLEH----- 341
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ + L +RI+ + L+P H L E+LVY K++ A G K +SGGG+LP HID F+
Sbjct: 342 -LDASTFERLASRILASALFPFHALGERLVYAKVREATGGRIKYVISGGGALPKHIDNFF 400
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E GV++ VGYGLTE+SPV ARRP N G+ G PI TE KIVD E+ + L A +G+
Sbjct: 401 EITGVEILVGYGLTETSPVTHARRPWRNFRGTAGQPIPGTEAKIVDPESRKPLAARERGL 460
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG Q+MQGY++NP AT +A+D +GW ++GD+GW+ P + LVL GRAK
Sbjct: 461 VLLRGPQIMQGYYQNPEATAKAIDAEGWFDSGDLGWLTPEND----------LVLTGRAK 510
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE---------EVL 408
DTIVL+ GEN+EP +E+A LRS + QI+++GQDQR GAIIVP+ E +
Sbjct: 511 DTIVLTNGENIEPQPIEDACLRSPYVDQIMLVGQDQRCIGAIIVPNIEALEKWAEGQNLT 570
Query: 409 MAAKRLSIVHADASELSKEKTI--SLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
++ + +I + +++ E TI L EL + + +I ++ EPF++
Sbjct: 571 LSIQSENITASPGQKINLESTIIQDLFRQELNREVQNRPGYRADDRINRFKLIVEPFSM 629
>gi|75909380|ref|YP_323676.1| AMP-dependent synthetase and ligase [Anabaena variabilis ATCC
29413]
gi|75703105|gb|ABA22781.1| AMP-dependent synthetase and ligase [Anabaena variabilis ATCC
29413]
Length = 658
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 258/419 (61%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ + +V + GD LS+LP WH YER Y++ S+G +YT +R++K DL++Y+P+
Sbjct: 227 QVTTFRVVVQPKVGDTALSILPSWHSYERTVEYYLLSQGCTQIYTNLRSVKADLKQYKPN 286
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM++VP ++E++Y G+QKQ A ++ + + L+ +S Y +RI +G L +
Sbjct: 287 YMVAVPRLWESIYEGVQKQFREQPANKQRLIKFLLGMSEKYIKAQRIAQGTSL--DHLHA 344
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S L LI A+++ P H+L +KLVY K++ A G K +SGGG+LP HID F+
Sbjct: 345 SSLERLI----AKVLELAFLPFHVLGQKLVYGKVKEATGGRFKQVISGGGALPKHIDTFF 400
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E IGV++ GYGLTE+SPV RRP N +G+ G PI TE+KIVD ET + LP G +G+
Sbjct: 401 EIIGVQILQGYGLTETSPVTNVRRPWRNFIGTSGQPIPGTEVKIVDPETRQPLPVGQRGL 460
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V ++G QVMQGY++NP AT +A+D GW ++GD+GW+ P + LVL GRAK
Sbjct: 461 VLLKGPQVMQGYYQNPEATAKAIDPQGWFDSGDLGWVTPDNE----------LVLTGRAK 510
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI- 416
DTIVLS GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A+ ++
Sbjct: 511 DTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSIGALIVPNVEALAKWAESQNLV 570
Query: 417 --VHADASELSKEKTISL----LYGELRKWTS---------KCSFQIGPIHVVDEPFTV 460
V D S + I+L + G R+ + + ++GP ++ EPF++
Sbjct: 571 LSVEDDNLTSSSSQKINLESKMIQGLFRQELNREVQNRPGYRPDDRVGPFKLILEPFSI 629
>gi|427719825|ref|YP_007067819.1| long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 7507]
gi|427352261|gb|AFY34985.1| Long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 7507]
Length = 658
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/412 (41%), Positives = 249/412 (60%), Gaps = 33/412 (8%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPL 125
+V E GD LS+LP WH YER YF+ S+G +YT +R++K DL+ ++PHYM+ VP
Sbjct: 234 VVQPEVGDTVLSILPSWHSYERTVEYFLLSQGCTQVYTNLRSVKKDLREFKPHYMVGVPR 293
Query: 126 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 185
++E++Y G QKQ A ++ + +L+ S Y +RI + L + I
Sbjct: 294 LWESIYEGAQKQFREQPAKKQRLINSLLGTSEKYIKAQRIAQKLDLEH------LDASAI 347
Query: 186 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 244
+ L ARI + L+PLH L EKLVY K++ A G K +SGGG+LP HID F+E IGV++
Sbjct: 348 EQLTARIQASALFPLHALGEKLVYAKVREATGGRVKQMISGGGALPKHIDNFFEIIGVQI 407
Query: 245 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 304
GYGLTE+SPV RRP+ N++G+ G P+ TE KIVD ET LP G +G+V ++G Q
Sbjct: 408 LQGYGLTETSPVTHVRRPSRNLIGASGQPLPATETKIVDPETRVPLPTGKRGLVLLKGPQ 467
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
+M+GY++NP AT +A+D GW ++GD+GW+ P + LVL GRAKDTIVL+
Sbjct: 468 IMEGYYQNPEATAKAIDPQGWFDSGDLGWLTPQND----------LVLTGRAKDTIVLTN 517
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSIV----- 417
GEN+EP +E+A LRS + QI+++GQDQR GA+IVP+ E + A + LSI
Sbjct: 518 GENIEPQPIEDACLRSPYVDQIMLVGQDQRSLGALIVPNVEALAKWAETQNLSISIQDDN 577
Query: 418 HADAS----ELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
ADAS +L + L EL + + +I ++ EPF++
Sbjct: 578 VADASSQKIDLESKIIQDLFRQELNREVQNRPGYRADDRISSFRLIPEPFSI 629
>gi|17231094|ref|NP_487642.1| hypothetical protein alr3602 [Nostoc sp. PCC 7120]
gi|17132735|dbj|BAB75301.1| alr3602 [Nostoc sp. PCC 7120]
Length = 683
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 258/419 (61%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ + +V + GD LS+LP WH YER Y++ S+G +YT +R++K DL++Y+P+
Sbjct: 252 QVTTFRVVVQPKVGDTALSILPSWHSYERTVEYYLLSQGCTQIYTNLRSVKADLKQYKPN 311
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM++VP ++E++Y G+QKQ A ++ + + L+ +S Y +RI +G L +
Sbjct: 312 YMVAVPRLWESIYEGVQKQFREQPANKQRLIKFLLGMSEKYIKAQRIAQGTSL--DHLHA 369
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S L LI A+++ P H+L +KLVY K++ A G K +SGGG+LP HID F+
Sbjct: 370 SSLERLI----AKVLEFAFLPFHVLGQKLVYGKVKEATGGRFKQVISGGGALPKHIDTFF 425
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E IGV++ GYGLTE+SPV RRP N +G+ G PI TE+KIVD ET + LP G +G+
Sbjct: 426 EIIGVQILQGYGLTETSPVTNVRRPWRNFIGTSGQPIPGTEVKIVDPETRQPLPVGKRGL 485
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V ++G QVMQGY++NP AT +A+D GW ++GD+GW+ P + LVL GRAK
Sbjct: 486 VLLKGPQVMQGYYQNPEATAKAIDPQGWFDSGDLGWVTPDNE----------LVLTGRAK 535
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI- 416
DTIVLS GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A+ ++
Sbjct: 536 DTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSIGALIVPNVEALAKWAESQNLV 595
Query: 417 --VHADASELSKEKTISL----LYGELRKWTS---------KCSFQIGPIHVVDEPFTV 460
V D S + I+L + G R+ + + ++GP ++ EPF++
Sbjct: 596 LSVEDDNLTSSSSQKINLESKMIQGLFRQELNREVQNRPGYRPDDRVGPFKLILEPFSI 654
>gi|411117918|ref|ZP_11390299.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoriales
cyanobacterium JSC-12]
gi|410711642|gb|EKQ69148.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoriales
cyanobacterium JSC-12]
Length = 659
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/348 (45%), Positives = 230/348 (66%), Gaps = 20/348 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L +V + GD+ LS+LP WH YER+ YF+ S+G +YT++R +K DL+ ++P
Sbjct: 221 QVETLGAVVQPKLGDRVLSILPTWHAYERSAEYFLLSQGCTQIYTSIRTVKKDLKDFKPQ 280
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQKQ 177
YM+SVP ++E++Y G+QKQ ++ + + IS Y +R++ L R
Sbjct: 281 YMVSVPRIWESVYEGVQKQFREQPEKKQKLIHFFLNISHRYIHARRVWNNLELLNREPSL 340
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDL 235
P L+AL A+I+ IL PLH L EK+VY K++ A G + +SGGGSL HID
Sbjct: 341 PVRLLAL-----AQIV--ILAPLHALGEKIVYSKVREAATGGQFRQAISGGGSLARHIDD 393
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+E +G++V VGYGLTE+SPV ARRP N+ GS G PI TEI+IVD E+ + LP G +
Sbjct: 394 FFEIMGIEVLVGYGLTETSPVTNARRPWRNLRGSAGQPIPGTEIRIVDPESRKPLPVGER 453
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G+V +RG Q+MQGY+ NP AT++A+D +GW ++GD+GW+ + LVL GR
Sbjct: 454 GLVLIRGPQIMQGYYNNPEATRKAIDPEGWFDSGDLGWVTKEND----------LVLTGR 503
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
AKDTIVL+ GEN+EP +E+A LRS+ I QI+++GQDQ+ GA+IVP+
Sbjct: 504 AKDTIVLTNGENIEPQPIEDACLRSAYIDQIMLVGQDQKSLGALIVPN 551
>gi|434387011|ref|YP_007097622.1| AMP-forming long-chain acyl-CoA synthetase [Chamaesiphon minutus
PCC 6605]
gi|428018001|gb|AFY94095.1| AMP-forming long-chain acyl-CoA synthetase [Chamaesiphon minutus
PCC 6605]
Length = 665
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 174/431 (40%), Positives = 254/431 (58%), Gaps = 50/431 (11%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI + ++PA G + LS+LP WH YER+C Y++ S+G YT +R K DL+ YQP
Sbjct: 226 QINTCGTVIPATPGSRVLSILPSWHSYERSCEYYLLSQGCTQTYTNIRYFKQDLKEYQPE 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL-----TR 173
Y+++VP + E++Y GIQKQ ++ + L+ +S Y +RI +G L T
Sbjct: 286 YLVAVPRLSESIYEGIQKQFREQPPNKQKLVARLLALSTKYIEARRIVQGLSLECLNPTL 345
Query: 174 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
QK L AR+ AIL P+H +A+KL+Y KI++A G + +SGGGSL H
Sbjct: 346 GQK-----------LIARLQMAILAPIHAIADKLIYSKIRAATGGKIRYIISGGGSLAKH 394
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
+DLF+E IGV + VGYGLTE++P+ RRP N+ S G P+ TEI+IVD +T + +
Sbjct: 395 LDLFFEIIGVNILVGYGLTETAPITNVRRPWQNLRLSSGQPLPGTEIRIVDVDTRQPVAI 454
Query: 293 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 352
G KG+V +RG QVMQGY+++P AT +A+D DGW N+GD+G + P++ L +
Sbjct: 455 GQKGLVMIRGPQVMQGYYRDPEATAKAIDVDGWFNSGDLGMLTPNND----------LTI 504
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV----- 407
GRAKDTIVLS GEN+EP +E+A LRSS I QIV++GQDQ+ GA+IVP+ E +
Sbjct: 505 TGRAKDTIVLSNGENIEPTPIEDACLRSSYISQIVLVGQDQKALGALIVPNSEALHQWAI 564
Query: 408 ---LMAAKRLSIVHADASE----------LSKEKTISLLYGELRKWTS-----KCSFQIG 449
L+ A + A ++E L+ + I L EL + + +I
Sbjct: 565 SQNLIPAPIAATNPASSNEPNILLDNPQILNNTQVIDLFRDELNREVKNRPGYRIDDRIA 624
Query: 450 PIHVVDEPFTV 460
I ++ EPF++
Sbjct: 625 TIKLIAEPFSI 635
>gi|428301191|ref|YP_007139497.1| AMP-dependent synthetase and ligase [Calothrix sp. PCC 6303]
gi|428237735|gb|AFZ03525.1| AMP-dependent synthetase and ligase [Calothrix sp. PCC 6303]
Length = 658
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 260/419 (62%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ SL +V E GD LS+LP WH YER+C YF+FS+G +YT++R++K+DL++++P+
Sbjct: 227 QVTSLGSVVQPEKGDTVLSILPSWHSYERSCEYFLFSQGCMQIYTSLRSIKNDLKKFKPN 286
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+I+VP + E++Y G+QKQ +++ + + L IS Y +RI +G L + QP
Sbjct: 287 YIIAVPRLLESIYEGVQKQFREQPPSKQKLVKNLFAISEKYIKAQRIVQGVSL--DNFQP 344
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S L D + A+I L PLH + EKLVY K++ A G K VSGGG+LP ++D F+
Sbjct: 345 SVL----DKITAQIQSIFLAPLHAVGEKLVYGKVREATGGKVKQMVSGGGALPRYVDNFF 400
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +GV++ VGYGLTE+SPV RR N+ G+ G I TE+KIV ET + + G +G+
Sbjct: 401 EIVGVEIFVGYGLTETSPVTHVRRSWRNLRGAAGLAIPGTEVKIVHPETRKPIENGQRGL 460
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG Q+MQGY++NP AT +A+D +GW ++GD+GW++ + L+L GRAK
Sbjct: 461 VLLRGPQIMQGYYQNPEATAKAIDSEGWFDSGDLGWVSDKND----------LILTGRAK 510
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI- 416
DTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A+ ++
Sbjct: 511 DTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSIGALIVPNLEALAKWAQEHNLD 570
Query: 417 --VHADASELSKEKTIS--------LLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ D LS + I+ L EL + + +I P ++ EPF++
Sbjct: 571 LCIQEDNVTLSGSQKINLESKIIQDLFRQELNREVQNRPGYRPDDRINPFRLILEPFSM 629
>gi|172036048|ref|YP_001802549.1| long-chain-fatty-acid CoA ligase [Cyanothece sp. ATCC 51142]
gi|354552853|ref|ZP_08972160.1| Long-chain-fatty-acid--CoA ligase [Cyanothece sp. ATCC 51472]
gi|171697502|gb|ACB50483.1| probable long-chain-fatty-acid CoA ligase [Cyanothece sp. ATCC
51142]
gi|353554683|gb|EHC24072.1| Long-chain-fatty-acid--CoA ligase [Cyanothece sp. ATCC 51472]
Length = 638
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 173/419 (41%), Positives = 250/419 (59%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+++L I+ + GD LS+LP WH YER+ YF+ S+G L YT +RN K DL++++PH
Sbjct: 206 QVKNLDAIIQPKAGDIVLSILPSWHSYERSAEYFLLSQGCTLTYTNIRNFKTDLKKFKPH 265
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+M+ VP ++++LY GIQKQ+ S ++ + + +S + +RI L
Sbjct: 266 HMVGVPRLWDSLYEGIQKQLRDQSPTQQKIVQFFFNLSQTFILSRRIANNMSLEH----- 320
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ + + AR+ ++L PLH L +KLVY KI+ +G + + VSGGGSL H+D FY
Sbjct: 321 -FDASGTERFIARLKASLLAPLHSLGDKLVYNKIREGLGGNFETLVSGGGSLAKHLDDFY 379
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E I V V VGYGLTE+SPV AR + N+ GS G PI TEIKIVD +T E L G KG+
Sbjct: 380 EIINVPVLVGYGLTETSPVTNARTHSHNLRGSSGQPIPKTEIKIVDLDTGEPLSQGKKGV 439
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT +A++ +GW N+GD+GWI P + LV+ GRAK
Sbjct: 440 VLIRGPQVMQGYYKKPEATAKAINSEGWFNSGDLGWITPMND----------LVITGRAK 489
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK----R 413
DTIVLS GEN+EP +E+A +RS+ I Q++++GQDQ+ GA+IVP+ + + K
Sbjct: 490 DTIVLSNGENIEPQPIEDACVRSAYIDQMMLVGQDQKALGALIVPNLDALQTWGKNQQLN 549
Query: 414 LSIVHADA-------SELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
L+ DA S+L + L EL + + QI ++ EPF+V
Sbjct: 550 LTFPPEDASREAIVNSDLYGKPVQDLFKQELNREVKNRPGYRADDQIKAFELILEPFSV 608
>gi|443319050|ref|ZP_21048288.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
6406]
gi|442781364|gb|ELR91466.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
6406]
Length = 657
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 249/421 (59%), Gaps = 34/421 (8%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI++L ++ GD+ L +LP WH + R YFI+S+G Y+ +R +K D + +PH
Sbjct: 225 QIQTLGAVIQPAIGDRVLGLLPTWHTFGRTAEYFIYSQGCTQTYSNIRTIKADFKTVKPH 284
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+M+ VP ++E++Y G+QKQ +++ + AL+ S Y +R L P
Sbjct: 285 FMVGVPRLWESIYEGVQKQFREQPESKQRLVNALLWHSQKYVENRRTANSLALDHPNASP 344
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFY 237
+ +RI P HLL EKLVY K++ A G KA +SGGGSL H+DLF+
Sbjct: 345 ------LRQFGSRIFSFAFLPGHLLGEKLVYSKVREATGGCVKALISGGGSLARHLDLFF 398
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E I V V VGYGLTE+SPV++ARRP N+ G+ G PI TEI++VD ET++ LP G KG+
Sbjct: 399 EIINVPVLVGYGLTETSPVLSARRPWRNLRGASGQPIPGTEIRVVDPETHQPLPLGQKGL 458
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V RG QVM+GY+KNP AT +ALD DGW +TGD+GWI + +VL GRAK
Sbjct: 459 VMARGPQVMEGYYKNPEATAKALDADGWFDTGDLGWITRDAN----------IVLTGRAK 508
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI- 416
DTIVL+ GEN+EP +E+A +RS I QI+++GQDQR GA++VP+ + + A+ +
Sbjct: 509 DTIVLTNGENIEPQPIEDACIRSPYIDQIMLVGQDQRSLGALVVPNLDALQKWAEPQGLY 568
Query: 417 --VHADASELSKE-KTIS--------LLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
V D++ + E +TIS L GEL + ++GP +V EPF++
Sbjct: 569 IEVPGDSTSIPPEFQTISLEDDRVQKLFRGELNAQVKDRPGYRPDDRVGPFRLVPEPFSI 628
Query: 461 N 461
Sbjct: 629 E 629
>gi|428774560|ref|YP_007166348.1| AMP-dependent synthetase and ligase [Cyanobacterium stanieri PCC
7202]
gi|428688839|gb|AFZ48699.1| AMP-dependent synthetase and ligase [Cyanobacterium stanieri PCC
7202]
Length = 636
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 250/419 (59%), Gaps = 35/419 (8%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L I+ GD+ L++LP WH YERA YF+ SRG L+YT++R K DL+ Y+P+
Sbjct: 208 QVRNLETIIQPSKGDRILTILPSWHSYERAAEYFLLSRGTTLIYTSIRYFKQDLKDYKPN 267
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM+ VP ++E++Y G+QK F S +++V + +S Y KR G L P
Sbjct: 268 YMVGVPRLWESIYEGVQKN-FRDSGKQKLV-NFFLGMSQGYLDGKRAQSGLDL--QNLNP 323
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S + D + + +P H+L +KLVY K++ +G S KA +SGGGSL HID F+
Sbjct: 324 SGM----DKFVGTLKTIVFYPFHILGDKLVYTKVREGVGNSIKAWISGGGSLAKHIDNFF 379
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
+ + + + VGYGLTE+SPV ARR N++G+ G P+ TEI I ET LP G KG+
Sbjct: 380 QIVNIPLLVGYGLTETSPVTNARRMNRNIVGASGQPLPETEIMIAHPETKTPLPQGEKGL 439
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG+QVMQGY+K P AT +A++EDGW ++GD+GW+ P + LV+ GRAK
Sbjct: 440 VFIRGTQVMQGYYKKPEATAKAINEDGWFDSGDLGWVTPDND----------LVITGRAK 489
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVLS GEN+EP LE+ LRS+ + QI+++GQDQ+ GA+IVP+ E + AK +
Sbjct: 490 DTIVLSNGENIEPQPLEDVCLRSAYVDQIMLVGQDQKYLGALIVPNLEALSAWAKENKVS 549
Query: 418 -----------HADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ S+L ++ +SL EL + + +I ++ EPF++
Sbjct: 550 LKIPDTGASREEVENSDLYSKEVMSLFKQELNREVKNRPGYRPDDRIAVFELILEPFSI 608
>gi|254411220|ref|ZP_05024997.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196181721|gb|EDX76708.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 672
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/346 (46%), Positives = 227/346 (65%), Gaps = 17/346 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ + ++ + GD+ LS+LP WHVYER YF+ S+G +YT +R++K DL+ ++P
Sbjct: 238 QVTTFGIVLQPKGGDRILSILPTWHVYERTVEYFLLSQGCTQIYTTIRHVKADLKAFKPI 297
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YMI VP ++E++Y G+QKQ ++ + L+ IS Y +RI +G L NQ P
Sbjct: 298 YMIGVPRLWESIYDGVQKQFREQPPNKQKLVFTLLDISQRYIKARRIAQGLDL--NQLNP 355
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S L + L A I +L P H LA+KL+Y+ ++ A G K +SGGGSL MH++ F+
Sbjct: 356 SPL----ERLSASIQALLLLPAHKLADKLIYQTVREATGGQIKTIISGGGSLAMHLENFF 411
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+++ VGYGLTE+SPV RR N+ S G P+ T+I+IVD ET + LP G +G+
Sbjct: 412 EIAGIEILVGYGLTETSPVTNVRRMERNLRRSSGLPMPGTQIRIVDPETRKPLPIGEQGL 471
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V V+G QVMQGY+KNP AT +A+D DGW +TGD+GW+ P+H LVL GRAK
Sbjct: 472 VLVKGPQVMQGYYKNPEATAKAIDSDGWFDTGDLGWVTPNHD----------LVLTGRAK 521
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
DTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+
Sbjct: 522 DTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSLGALIVPN 567
>gi|254411063|ref|ZP_05024841.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196182418|gb|EDX77404.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 655
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/377 (45%), Positives = 230/377 (61%), Gaps = 19/377 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ SL IV E GD+ LS+LP WHVYERA YF S+G L+YT +R++K DL P+
Sbjct: 225 QVTSLGAIVQLEAGDRVLSILPTWHVYERAIEYFALSQGCTLIYTTLRHVKRDLNAQHPN 284
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y +SVP + E++Y +QKQ+ SA ++ + L IS + +R+ G L +QP
Sbjct: 285 YFVSVPRLLESIYETVQKQLSKESARKQRLVNILFSISDRFIKARRLVHGLSL--EHQQP 342
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S LWAR+ L +H+LA++ +Y+KI+ IG + K + GGG+L +D FY
Sbjct: 343 SGF----QRLWARLQWLTLVLIHVLADQFIYQKIREQIGANLKQTICGGGALSQKLDDFY 398
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E IG++V GYGLTE+SPV+ ARR N+ GS G PI TEI+IVD +T E L G KG+
Sbjct: 399 EIIGIEVLEGYGLTETSPVLTARRSWHNLRGSAGKPILETEIRIVDPDTRETLLQGEKGL 458
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V RGSQ+MQGY++NP AT + +D GW NT D+GW+ LVL GRAK
Sbjct: 459 VWARGSQIMQGYYRNPEATDKVIDAQGWFNTEDLGWLTVQED----------LVLTGRAK 508
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMAAKRLS 415
DTIVLS GENVEP +E A +RS I Q+VV+GQDQR GA+IVP D + A +
Sbjct: 509 DTIVLSNGENVEPKPIENACMRSRYIDQMVVVGQDQRSLGALIVPNFDNLQGWAAENQYH 568
Query: 416 IVHADASELSKEKTISL 432
+ D S E+TI L
Sbjct: 569 LQLPDGESASGEETIDL 585
>gi|428216435|ref|YP_007100900.1| o-succinylbenzoate--CoA ligase [Pseudanabaena sp. PCC 7367]
gi|427988217|gb|AFY68472.1| o-succinylbenzoate--CoA ligase [Pseudanabaena sp. PCC 7367]
Length = 626
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/415 (40%), Positives = 250/415 (60%), Gaps = 37/415 (8%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R +V GD+ LS+LP WH YER+C YF+FS+G+ +YT +R +K+DL ++P
Sbjct: 207 QVRGGTAMVKPFPGDRILSILPTWHSYERSCEYFLFSQGVTQIYTNLRKIKNDLATFKPQ 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM++VP ++E++Y GIQ++ SA +R + L+ S Y +R+ G LT +
Sbjct: 267 YMLAVPRLWESIYEGIQRKFDAESATKRKLINFLLNASNTYIKARRVVNGLSLTGGNQ-- 324
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
L AR+ PL+ LA+KLV+ KI++ IG K SGGG+L H++LFY
Sbjct: 325 ---------LKARLTMFAYAPLYWLAKKLVFDKIRAGIGGEFKYICSGGGALQPHLELFY 375
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
EA +++ VGYGLTE+SP++ ARRP N+ + G P+ EIKIVD ET E P G +G+
Sbjct: 376 EAAQIEILVGYGLTETSPMVTARRPERNLRTTSGIPLPDAEIKIVDPETKEAFPPGKRGL 435
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V RG +MQGY+KNP AT +A+D DGW NTGD+G++ + L + GRAK
Sbjct: 436 VMARGPMIMQGYYKNPEATNKAIDADGWFNTGDLGFLTHKND----------LTITGRAK 485
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVLS GEN+EPL +E+A S+ I QI+++GQDQR+ GA+IVP+ L A + ++
Sbjct: 486 DTIVLSNGENIEPLSIEDACSSSTYIDQIMLVGQDQRQLGALIVPN----LKALEVDGLL 541
Query: 418 HADA------SELSKEKTISLLYGELRKWTSKCSFQ-----IGPIHVVDEPFTVN 461
AD+ L+++K ++ EL + Q IGP + EPF ++
Sbjct: 542 PADSELAESIDLLNQDKIRNVFRSELTRKVQDRPGQSINDRIGPFEFLPEPFDIS 596
>gi|359461826|ref|ZP_09250389.1| long-chain-fatty-acid-CoA ligase [Acaryochloris sp. CCMEE 5410]
Length = 646
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 161/345 (46%), Positives = 221/345 (64%), Gaps = 17/345 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I ++ V E GD+ LS+LP WH + R Y+ S+G +YT++RNLK DLQ Y+PHY
Sbjct: 217 ITAMPAAVQPEVGDRILSILPTWHSFGRLVDYYFLSQGCTQIYTSIRNLKGDLQTYKPHY 276
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
M SVP ++E+LY G+QK+ A R+ + IS Y +R + + N PS
Sbjct: 277 MGSVPRLWESLYEGMQKKFRGEPATRQKLINTFFGISQKYILARRTQQRLDI--NNLNPS 334
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 238
L + A++ L PLH L +++VY KI+ A+G K SGGGSL MH++ F+E
Sbjct: 335 GLQRFL----AQLQMLFLGPLHQLGDRIVYTKIRQAMGGQFKQSFSGGGSLAMHLETFFE 390
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+G+++ VGYGLTE+SPV+ ARR N+ S G PI TEI+IVD +T + LP G +G+V
Sbjct: 391 TVGIELIVGYGLTETSPVLTARRAEHNLRRSAGKPIPKTEIRIVDPQTRQTLPTGQQGLV 450
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
VRG QVMQGY++NP AT + +D++GW +TGD+GW+ P LVL GRAKD
Sbjct: 451 IVRGPQVMQGYYQNPEATAKVIDQEGWFDTGDLGWLTPTQD----------LVLTGRAKD 500
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
TIVLS GEN+EP LE+A RS+ I QI+V+GQDQR GA+IVP+
Sbjct: 501 TIVLSNGENIEPQPLEDACARSAFIDQIMVVGQDQRSLGALIVPN 545
>gi|332711790|ref|ZP_08431721.1| long-chain acyl-CoA synthetase [Moorea producens 3L]
gi|332349768|gb|EGJ29377.1| long-chain acyl-CoA synthetase [Moorea producens 3L]
Length = 659
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 167/410 (40%), Positives = 251/410 (61%), Gaps = 25/410 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L ++ + D+ LS+LP WH YER+ YF+ S+G +YT +R++K DL+ ++P+
Sbjct: 236 QVNTLGTVIEIQKSDRVLSILPTWHAYERSAEYFLLSQGSTQIYTNLRHVKKDLKTFKPN 295
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+M+ VP ++E++Y G+QKQ ++ + + L+ S Y +R+ +G L P
Sbjct: 296 FMVGVPRLWESIYEGVQKQFREQPEGKQKLVQNLLGFSQRYIEARRLAQGLTLDNLNPSP 355
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
I L A + + LWP+H LA KLVY+K++ A G K +SGGGSL H+D F+
Sbjct: 356 ------IQKLLATVQASYLWPVHQLANKLVYQKVREATGGEIKQVISGGGSLARHLDNFF 409
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E IGV+V VGYGLTE+SPV ARR N+ S G P+ T+I+IVD ET++ LP G G+
Sbjct: 410 EIIGVEVLVGYGLTETSPVTNARRSYRNLRFSAGPPLPETQIRIVDPETHQPLPQGQTGL 469
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V V+G QVMQ Y+ P AT +A+D D W +TGD+GW+ P + LVL GRAK
Sbjct: 470 VMVKGPQVMQEYYHKPEATAKAIDRDRWFDTGDLGWVTPQND----------LVLTGRAK 519
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMAAKRLS 415
DTIVL+ GEN+EP +E+A LRS+ I QI+++GQDQ+ GA+IVP D + AA+ L+
Sbjct: 520 DTIVLTNGENIEPQPIEDACLRSAYIDQIMLVGQDQKALGALIVPNLDALQGWAAAQNLT 579
Query: 416 I-VHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFT 459
+ V A +L+ ++ +L EL + + +I ++ EPF+
Sbjct: 580 LDVFAQDVDLNTKEVQTLYRTELNREVQNRPGYRQDDRISTFRLILEPFS 629
>gi|409990099|ref|ZP_11273528.1| AMP-dependent synthetase and ligase [Arthrospira platensis str.
Paraca]
gi|291566551|dbj|BAI88823.1| probable long-chain-fatty-acid--CoA ligase [Arthrospira platensis
NIES-39]
gi|409939040|gb|EKN80275.1| AMP-dependent synthetase and ligase [Arthrospira platensis str.
Paraca]
Length = 647
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 252/424 (59%), Gaps = 34/424 (8%)
Query: 57 NF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQR 114
NF Q+ ++ D++ + G+ LS+LP WH R+ Y+ SRG ++YT +R K DLQ
Sbjct: 212 NFLHQLITIADVIAPQPGEIVLSILPTWHSLGRSGQYYFLSRGTMVIYTNIRYFKQDLQE 271
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
++P YM+SVP ++E++Y QKQ A R+ + +S Y +RI + +
Sbjct: 272 FKPQYMVSVPRIWESIYEAAQKQFRDGPATRQKLVNFFFGMSNRYIEARRIVQKLTIPGQ 331
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
+ + AL A++ +L P+H L +KL+Y+K++ A+G K +SGGGSL MH+
Sbjct: 332 ESNNNSSTAL-----AKLQTIVLTPVHALGDKLIYQKVRQAVGGKLKFAISGGGSLAMHL 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
+ FYE +G+ + VGYGLTE++PV+ ARRP N+ GS G PI TEI+I+D ET + G
Sbjct: 387 ENFYEIVGIDLLVGYGLTETAPVLTARRPGHNLRGSAGRPIPETEIRIIDPETRQTYEPG 446
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG+V RG QVM+GYF+NP AT +A+D +GW +TGD+GW+ P LVL
Sbjct: 447 HKGLVLARGPQVMRGYFQNPEATDKAIDPEGWFDTGDLGWLTPQKD----------LVLT 496
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GRAKDTIVL+ GEN+EP +E+A +RS I QIV++GQDQ+ GA+IVP+ + + A
Sbjct: 497 GRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLVGQDQKSLGALIVPNLDALKQWASG 556
Query: 414 LSI---VHADASELSKEKTI--------SLLYGELR-KWTSKCSF----QIGPIHVVDEP 457
+ V + + E I SL EL + ++ SF +IGP ++ EP
Sbjct: 557 QGLGLQVPGEEQQGEAENAIAIDSQPIQSLFRQELTLQVKNRPSFRPDDRIGPFRLILEP 616
Query: 458 FTVN 461
FT++
Sbjct: 617 FTID 620
>gi|427736347|ref|YP_007055891.1| AMP-forming long-chain acyl-CoA synthetase [Rivularia sp. PCC 7116]
gi|427371388|gb|AFY55344.1| AMP-forming long-chain acyl-CoA synthetase [Rivularia sp. PCC 7116]
Length = 663
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/420 (42%), Positives = 251/420 (59%), Gaps = 33/420 (7%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
+Q+R+L IV E GD LS+LP WHV ER YF+ S+G +YT +R++K+DL++Y+P
Sbjct: 231 YQVRNLRAIVQPEAGDVVLSILPTWHVLERTGEYFLLSQGCTQVYTNLRSIKNDLKKYKP 290
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
HYMI+VP + E++Y G+QKQ +++ + + IS Y +RI + L
Sbjct: 291 HYMIAVPRILESVYEGVQKQFREQPTSKQNLINRFLGISGKYIQARRIAQNLDLQNLNPS 350
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 236
+A A I L PLH LA K+VY K++ A G K + GGG+L HID F
Sbjct: 351 TGERIA------ASIQEKALSPLHALAGKIVYGKVKEATGGRIKQFICGGGALAKHIDDF 404
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
YE IG+++ VGYGLTE+SPV ARR N+ GS G + TE+KIVD ET + L KG
Sbjct: 405 YEIIGIEILVGYGLTETSPVTHARRHWSNLRGSSGLGVPGTEVKIVDLETRKELAPTEKG 464
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+V ++G Q+MQGY+KNP ATK+A+D +GW ++GD+GW+ P +VL GRA
Sbjct: 465 LVLLKGPQIMQGYYKNPEATKKAIDSEGWFDSGDLGWVTPRLD----------IVLTGRA 514
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRL 414
KDTIVL+ GEN+EPL +E+A LRSS I QI+++GQD++ GA IVP+ E E A+ L
Sbjct: 515 KDTIVLTNGENIEPLPIEDACLRSSFIDQIMLVGQDKKSLGAFIVPNVEALEKWAEAQNL 574
Query: 415 SI-VHADASELSKEKTISL------------LYGELRKWTS-KCSFQIGPIHVVDEPFTV 460
+ V D S + I+L L E+R + +IGP ++ EPF++
Sbjct: 575 ELCVKEDNVTSSTSQKINLESKMIQDLFRQELTREVRNRPGYRPDDRIGPFKLILEPFSM 634
>gi|113475497|ref|YP_721558.1| AMP-dependent synthetase and ligase [Trichodesmium erythraeum
IMS101]
gi|110166545|gb|ABG51085.1| AMP-dependent synthetase and ligase [Trichodesmium erythraeum
IMS101]
Length = 657
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/410 (42%), Positives = 245/410 (59%), Gaps = 23/410 (5%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
+QI L +V G+ LS+LP WH + R Y S+G +YT R LK DLQ ++P
Sbjct: 235 YQINFLGTVVQPSPGEFTLSILPTWHSFGRTAEYLFLSQGCTQIYTNKRYLKKDLQEHKP 294
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
HY++SVP ++E +Y G+Q+Q+ A ++ +AR + IS Y R+ + L N
Sbjct: 295 HYLMSVPRIWELIYEGVQRQLREQPANKQKLARFFLDISERYIQACRVTQELVLELNS-- 352
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 236
PS L L+ A +LWP+H L K+VY+KI+ A G K VSGGGSL MH++ F
Sbjct: 353 PSELEKLM----ATWQSWLLWPIHALGTKIVYQKIRQATGGRLKFAVSGGGSLGMHLENF 408
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+E IG+ + VGYGLTE+SPV+ R N+ GS G P+ TEIKIV+ ET E L G KG
Sbjct: 409 FEIIGIDLLVGYGLTETSPVLTVRHYWENLRGSSGRPLPGTEIKIVNPETYETLGFGEKG 468
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+V RG Q+M GY++NP ATK+A+D +GWLNTGDIGWI P + L+L GRA
Sbjct: 469 LVLARGPQIMVGYYQNPEATKKAIDSEGWLNTGDIGWINPRND----------LILTGRA 518
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
KDTIVL+ GEN+EP +E A RS I QI+++GQDQ+ GA+IVP+ E V + A + +
Sbjct: 519 KDTIVLTNGENIEPQPIENACTRSQYIDQIMLVGQDQKYLGALIVPNFEAVELWATQSQL 578
Query: 417 VHADASELSKEKTISLLY-GELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ K + + L+ EL + + +IGP ++ +PFT+
Sbjct: 579 SESQPKIDWKSQALQELFRQELNQEVKNRPGYRPDDRIGPFRLILDPFTI 628
>gi|428207002|ref|YP_007091355.1| AMP-dependent synthetase and ligase [Chroococcidiopsis thermalis
PCC 7203]
gi|428008923|gb|AFY87486.1| AMP-dependent synthetase and ligase [Chroococcidiopsis thermalis
PCC 7203]
Length = 674
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 225/348 (64%), Gaps = 17/348 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ S +V E GD+ LS+LP WH YER+ YF+ S+G +YT +R++K DL+ ++P
Sbjct: 226 QVTSFGAVVQPEIGDRILSILPVWHCYERSVEYFLLSQGCTQIYTNIRHVKADLKAFKPR 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E++Y G+QKQ ++ + +L+ IS Y +RI G L P
Sbjct: 286 LMVGVPRLWESIYEGVQKQFRDQPVKKQRLIYSLLNISQRYIKARRIVRGLALDNLYPSP 345
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ L A I A+L P+H LA++L+YK+++ A G + +SGGGSL MH++ F+
Sbjct: 346 ------LQRLQAGIQTAVLAPIHNLADRLIYKQVREATGGRIRQVISGGGSLAMHLENFF 399
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E +GV++ VGYGLTE+SPV RRP N+ GS G P+ TE KIVD ET + LP +G+
Sbjct: 400 EIVGVEILVGYGLTETSPVTHVRRPWRNLRGSSGLPMAGTEAKIVDPETRQTLPPMQRGL 459
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+KNP AT +A+D +GW +TGD+G + P + +VL GRAK
Sbjct: 460 VLIRGPQVMQGYYKNPEATAKAIDPEGWFDTGDLGLVTPKND----------IVLTGRAK 509
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
DTIVLS GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E
Sbjct: 510 DTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSLGALIVPNLE 557
>gi|428307720|ref|YP_007144545.1| long-chain-fatty-acid--CoA ligase [Crinalium epipsammum PCC 9333]
gi|428249255|gb|AFZ15035.1| Long-chain-fatty-acid--CoA ligase [Crinalium epipsammum PCC 9333]
Length = 662
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 225/346 (65%), Gaps = 17/346 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ +L ++ + G K LS+LP WH YER+ YF+ S+G +YT +R +K DL+ ++P+
Sbjct: 225 QVTTLGTVIKPQQGSKVLSILPSWHSYERSAEYFLLSQGCTQLYTNLRYIKQDLKTFKPN 284
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YMI+VP ++E++Y G QKQ + ++ + IS Y +R+ +G L P
Sbjct: 285 YMIAVPRLWESIYEGAQKQFREQPSNKQKLINTFFSISQRYIKARRLAQGLDL--ENLNP 342
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFY 237
S + + A++ ++L P+H L E+LVY K++ A G V SGGGSL H++ F+
Sbjct: 343 SA----TEKISAKVQASVLAPVHALGERLVYGKVREATGGEIIQVISGGGSLAKHLENFF 398
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E IGV + VGYGLTE+SPV ARRP N+ GS G PI TEIKIV+ ET + LP G +G+
Sbjct: 399 EIIGVNILVGYGLTETSPVTNARRPWHNLRGSSGKPIPGTEIKIVNPETRQPLPTGERGL 458
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V ++G QVMQGY++NP AT +A+D +GW ++GD+GW+ + LVL GRAK
Sbjct: 459 VLIKGPQVMQGYYQNPEATAKAIDSEGWFDSGDLGWVTKEND----------LVLTGRAK 508
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
DTIVL+ GEN+EP +E+A LRS+ + QIV++GQDQ+ GA+IVP+
Sbjct: 509 DTIVLTNGENIEPQPIEDACLRSAYVDQIVLVGQDQKSLGALIVPN 554
>gi|218437444|ref|YP_002375773.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7424]
gi|218170172|gb|ACK68905.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7424]
Length = 638
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 174/424 (41%), Positives = 246/424 (58%), Gaps = 39/424 (9%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
++I S + GD+ LS+LP WH YER Y++ S+G +YT +RN K+DL++++P
Sbjct: 205 YEINSFGVAFQPDPGDRVLSILPSWHAYERTVEYYVLSQGSTQIYTNLRNFKNDLKQFKP 264
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
H M+ VP ++E++Y IQKQ A +R + + +S Y KRI F L
Sbjct: 265 HLMVGVPRLWESIYESIQKQFREQPAKKRKIVNFFLNLSENYVIAKRIANNFSLDHLD-- 322
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 236
V+ + L AR+ +L PLH + ++LVY+KI+ +G KA +SGGGSL HID F
Sbjct: 323 ----VSASERLMARVKATVLAPLHRVGDRLVYQKIREGVGGKVKAWISGGGSLARHIDTF 378
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
YE + + V VGYGLTE+SPV R NV GS G P+ TEI+IVD ET + LP KG
Sbjct: 379 YEIVNIPVLVGYGLTETSPVTNVRTLDHNVRGSSGPPLPRTEIRIVDPETRQDLPPKEKG 438
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+V +RG QVMQGY+K P AT +A+D GW ++GD+G + P + LVL GRA
Sbjct: 439 LVLIRGPQVMQGYYKKPEATAKAIDPQGWFDSGDLGCVTPIND----------LVLTGRA 488
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD--------KEEVL 408
KDTIVLS GEN+EP +E+A +RS I QI+++GQDQ+ GA+IVP+ KE+ L
Sbjct: 489 KDTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQDQKALGALIVPNLDALSAWGKEQQL 548
Query: 409 ------MAAKRLSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEP 457
+ A R I H S L + +LL EL + + QI ++ EP
Sbjct: 549 DLDIPDIHASRDRIKH---SSLYDKPVQTLLRQELNQRVKDRPGYRIDDQIKVFELILEP 605
Query: 458 FTVN 461
F+++
Sbjct: 606 FSID 609
>gi|209524077|ref|ZP_03272628.1| AMP-dependent synthetase and ligase [Arthrospira maxima CS-328]
gi|423066015|ref|ZP_17054805.1| AMP-dependent synthetase and ligase [Arthrospira platensis C1]
gi|209495452|gb|EDZ95756.1| AMP-dependent synthetase and ligase [Arthrospira maxima CS-328]
gi|406712514|gb|EKD07699.1| AMP-dependent synthetase and ligase [Arthrospira platensis C1]
Length = 648
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 250/424 (58%), Gaps = 34/424 (8%)
Query: 57 NF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQR 114
NF Q+ ++ D++ + G+ LS+LP WH R+ Y+ SRG ++YT +R K DLQ
Sbjct: 213 NFLHQLITIADVIAPQPGEIVLSILPTWHSLGRSGQYYFLSRGTMVIYTNIRYFKQDLQE 272
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
++P YM+SVP ++E++Y QKQ A R+ + +S Y +RI + +
Sbjct: 273 FKPQYMVSVPRIWESIYEAAQKQFRDGPATRQKLVNFFFGMSNRYIQARRIVQKLTIPGQ 332
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
+ AL A++ +L P+H L +KL+Y+K++ A+G K +SGGGSL MH+
Sbjct: 333 GSNQNSSTAL-----AKLQTILLTPVHALGDKLIYQKVRQAVGGKLKFAISGGGSLAMHL 387
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
+ FYE +G+ + VGYGLTE++PV+ ARRP+ N+ GS G PI TEI+I+D ET + G
Sbjct: 388 ENFYEIVGIDLLVGYGLTETAPVLTARRPSHNLRGSAGRPIPETEIRIIDPETRQTCEPG 447
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG+V RG QVM GYF+NP AT +A+D +GW +TGD+GW+ P LVL
Sbjct: 448 YKGLVLARGPQVMTGYFQNPEATDKAIDPEGWFDTGDLGWLTPQKD----------LVLT 497
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GRAKDTIVL+ GEN+EP +E+A +RS I QIV++GQDQ+ GA+IVP+ + + A
Sbjct: 498 GRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLVGQDQKSLGALIVPNLDALKQWASG 557
Query: 414 LSI---VHADASELSKEKTI--------SLLYGELR-KWTSKCSF----QIGPIHVVDEP 457
+ V + + E I SL EL + ++ SF +IG ++ EP
Sbjct: 558 QGLHLQVPGEEQQGETENAIAIDSQPIQSLFRQELNLQVKNRPSFRPDDRIGQFRLILEP 617
Query: 458 FTVN 461
F+++
Sbjct: 618 FSID 621
>gi|428210574|ref|YP_007083718.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoria acuminata
PCC 6304]
gi|427998955|gb|AFY79798.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoria acuminata
PCC 6304]
Length = 668
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 254/424 (59%), Gaps = 38/424 (8%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L ++ GD+ +++LP WH + R YF+ SRG YT +R LK DL+ Y P
Sbjct: 232 QIENLPTLMQPTPGDRIITILPTWHSFGRMGQYFLLSRGCSQFYTNIRYLKADLKEYHPK 291
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y VP ++E++Y G+QKQ A R+ + + S +Y RI +G L Q +P
Sbjct: 292 YTFGVPRLWESIYEGVQKQFREQPANRQKLVKTFFGFSQSYIEAGRILQGLQL---QLEP 348
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ + + L A I A+LWPLH L ++LVY K++ A G + +SGGGSL MHI+ F+
Sbjct: 349 A---SGSEKLLAGIKRALLWPLHTLGDRLVYNKVRQATGGQLQYVISGGGSLAMHIENFF 405
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E IG+ V VGYGLTE+SPV+ ARR N+ GS G PI +TE++IV ET + L G +G+
Sbjct: 406 EIIGIDVLVGYGLTETSPVLTARRFWKNLRGSAGRPIPYTELRIVHPETRKPLQTGERGL 465
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V RG Q+MQGY++NP AT +A+D +GW +TGD+GW+ P G LVL GRAK
Sbjct: 466 VLARGPQIMQGYYQNPEATTKAIDPEGWFDTGDLGWLTP----------GNDLVLTGRAK 515
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM--AAKRLS 415
DTIVL+ GEN+EP +E+A +RS+ I Q++++GQDQ+ GA+IVP+ E + +++ LS
Sbjct: 516 DTIVLTNGENIEPQPIEDACIRSAYIDQMMLVGQDQKCLGALIVPNFEALQQWASSQNLS 575
Query: 416 IVHAD---------AS-----ELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDE 456
+ + AS +LS + +L EL + + +IGP ++ E
Sbjct: 576 LRLPENVSQGNPPPASGTREIDLSSPEVDNLFRQELNREVKNRPGYRPDDRIGPFSLLSE 635
Query: 457 PFTV 460
PFT+
Sbjct: 636 PFTM 639
>gi|22298844|ref|NP_682091.1| long-chain-fatty-acid CoA ligase [Thermosynechococcus elongatus
BP-1]
gi|22295025|dbj|BAC08853.1| long-chain-fatty-acid CoA ligase [Thermosynechococcus elongatus
BP-1]
Length = 658
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 180/420 (42%), Positives = 251/420 (59%), Gaps = 33/420 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L+ IV + GD+ LS+LP WH YER YF+F+ G YT +R+ K+DL+R +PH
Sbjct: 227 QIVNLWAIVQPQVGDRVLSILPIWHAYERVAEYFLFACGCSQTYTNLRHFKNDLKRCKPH 286
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YMI+VP ++E+ Y G+QKQ+ S A +R +A+ + + Y +R+ G LT +
Sbjct: 287 YMIAVPRIWESFYEGVQKQLRDSPATKRRLAQFFLSVGQQYILQRRLLTGLSLTNPHPR- 345
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
WL AR+ +L PL+ L EK +Y KI+ A G K +SGGG+L H+D FY
Sbjct: 346 ----GWQKWL-ARVQTLLLKPLYELGEKRLYSKIREATGGEIKQVISGGGALAPHLDTFY 400
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E I ++V VGYGLTE++ V+ ARR N+ GS G PI T IKIVD ET L G KG+
Sbjct: 401 EVINLEVLVGYGLTETAVVLTARRSWANLRGSAGRPIPDTAIKIVDPETKAPLEFGQKGL 460
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +G QVM+GY+ P AT + LD +GW +TGD+G++ P+ G LVL GR K
Sbjct: 461 VMAKGPQVMRGYYNQPEATAKVLDAEGWFDTGDLGYLTPN----------GDLVLTGRQK 510
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAK--R 413
DTIVLS GEN+EP +E+A +RS I QI+++GQDQ+ GA+IVP+ E E + AK R
Sbjct: 511 DTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQDQKALGALIVPNLEALEAWVVAKGYR 570
Query: 414 LSIVHADASELSKE------KTISLLYGE--LRKWTSKCSF----QIGPIHVVDEPFTVN 461
L + + A S E K I LY + LR+ ++ + +I V EPFT+
Sbjct: 571 LELPNRPAQAGSGEVVTLESKVIIDLYRQELLREVQNRPGYRPDDRIATFRFVLEPFTIE 630
>gi|376004162|ref|ZP_09781920.1| putative long-chain-fatty-acid-CoA ligase, AMP dependent
[Arthrospira sp. PCC 8005]
gi|375327496|emb|CCE17673.1| putative long-chain-fatty-acid-CoA ligase, AMP dependent
[Arthrospira sp. PCC 8005]
Length = 647
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 250/424 (58%), Gaps = 34/424 (8%)
Query: 57 NF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQR 114
NF Q+ ++ D++ + G+ LS+LP WH R+ Y+ SRG ++YT +R K DLQ
Sbjct: 212 NFLHQLITIADVIAPQPGEIVLSILPTWHSLGRSGQYYFLSRGTMVIYTNIRYFKQDLQE 271
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
++P YM+SVP ++E++Y QKQ A R+ + +S Y +RI + +
Sbjct: 272 FKPQYMVSVPRIWESIYEAAQKQFRDGPATRQKLVNFFFGMSNRYIEARRIVQKLTIPGQ 331
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
+ AL A++ +L P+H L +KL+Y+K++ A+G K +SGGGSL MH+
Sbjct: 332 GSNQNSSTAL-----AKLQTILLTPVHALGDKLIYQKVRQAVGGKLKFAISGGGSLAMHL 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
+ FYE +G+ + VGYGLTE++PV+ ARRP+ N+ GS G PI TEI+I+D ET + G
Sbjct: 387 ENFYEIVGIDLLVGYGLTETAPVLTARRPSHNLRGSAGRPIPETEIRIIDPETRQTCEPG 446
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG+V RG QVM GYF+NP AT +A+D +GW +TGD+GW+ P LVL
Sbjct: 447 YKGLVLARGPQVMTGYFQNPEATDKAIDPEGWFDTGDLGWLTPQKD----------LVLT 496
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GRAKDTIVL+ GEN+EP +E+A +RS I QIV++GQDQ+ GA+IVP+ + + A
Sbjct: 497 GRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLVGQDQKSLGALIVPNLDALKQWASG 556
Query: 414 LSI---VHADASELSKEKTI--------SLLYGELR-KWTSKCSF----QIGPIHVVDEP 457
+ V + + E I SL EL + ++ SF +IG ++ EP
Sbjct: 557 QGLHLQVPGEEQQGETENAIAIDSQPIQSLFRQELNLQVKNRPSFRPDDRIGQFRLILEP 616
Query: 458 FTVN 461
F+++
Sbjct: 617 FSID 620
>gi|427421674|ref|ZP_18911857.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
7375]
gi|425757551|gb|EKU98405.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
7375]
Length = 641
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/411 (40%), Positives = 240/411 (58%), Gaps = 26/411 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +V + G K +S+LP WH YER YF S+G++ +YT +R +K DL+ Y+P+
Sbjct: 219 QISGACSVVHPKPGSKVMSILPIWHCYERTFEYFTLSQGVQQVYTNIRYVKKDLKAYKPN 278
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM+ VP ++E++Y G+QKQ +++ + + S Y A KRI E L
Sbjct: 279 YMVGVPRLWESIYEGVQKQFREQPESKQKLINFFLHQSQRYIAAKRIAENLSL------- 331
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
Y + D A I CA+L P H L + +VYKKI+ A G VSGGGS+ H++ FY
Sbjct: 332 DYSPSAFDRAMASIQCAVLLPFHKLGDSMVYKKIREATGGDINFVVSGGGSIADHLEDFY 391
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E I V + GYGLTE+SP+ RRP N+ G+ G P+ TE +IVD ++ + +P G KG+
Sbjct: 392 EIIDVAILGGYGLTETSPITHVRRPWQNLRGADGQPLPGTETRIVDLDSRQDVPQGQKGL 451
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V VRG Q+MQGY+KNP AT +A+D DGW +TGD+G I G LV+ GRAK
Sbjct: 452 VLVRGPQIMQGYYKNPDATSKAIDPDGWFDTGDLGKIT----------ANGDLVITGRAK 501
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVL++GEN+EP +E A RS + QI+++GQDQ+ GA+IVP+ E + A I
Sbjct: 502 DTIVLTSGENIEPQPIENACARSKYVDQIMLVGQDQKVLGALIVPNLEALSQWATTQGIT 561
Query: 418 HADAS---ELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
D + L+ K +L EL + + +IGP ++ EPF++
Sbjct: 562 IDDDNPVESLNNSKVQTLFKQELTREVKARPGHRPDERIGPFTLLSEPFSM 612
>gi|284928783|ref|YP_003421305.1| AMP-forming long-chain acyl-CoA synthetase [cyanobacterium UCYN-A]
gi|284809242|gb|ADB94947.1| AMP-forming long-chain acyl-CoA synthetase [cyanobacterium UCYN-A]
Length = 638
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 219/346 (63%), Gaps = 17/346 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QIRSL I+ + GD+ LS+LP WH YER+ YF+ S+G L+YT +RN K+DL++++PH
Sbjct: 206 QIRSLDTIIKPKPGDRILSILPSWHSYERSAEYFLLSQGCTLIYTNIRNFKNDLKKFKPH 265
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+M+ VP ++E+LY IQKQ S A+ + + S + +RI+ CL+ +P
Sbjct: 266 HMVGVPRLWESLYEVIQKQFREQSVAKEKIIKYCFENSLKFIVCRRIFN--CLSLENLKP 323
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S+ + A I L+P+H LA+ LVY++I+ +G S K +SGGGSL H+D FY
Sbjct: 324 SFQTRAM----AFIKLIALYPIHKLADLLVYRQIRDNLGGSFKTLISGGGSLAKHLDDFY 379
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E I + + VGYGLTE+SPV AR N+ G+ G PI TEI IVD T ++L G G+
Sbjct: 380 EIIDIPILVGYGLTETSPVANARTHKHNLRGTAGQPIAGTEINIVDPNTRQILSKGKCGL 439
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
+ +RG QVMQGY+K T + D GW ++GD+GW+ P + LV+ GR K
Sbjct: 440 ILIRGPQVMQGYYKKIEETNKVKDSQGWFDSGDLGWLTPMND----------LVITGRIK 489
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
DTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+
Sbjct: 490 DTIVLSNGENIEPQPIEDACLRSVYIDQIMLVGQDQKMLGALIVPN 535
>gi|300868267|ref|ZP_07112896.1| AMP-dependent synthetase and ligase [Oscillatoria sp. PCC 6506]
gi|300333702|emb|CBN58080.1| AMP-dependent synthetase and ligase [Oscillatoria sp. PCC 6506]
Length = 651
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 164/410 (40%), Positives = 243/410 (59%), Gaps = 27/410 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI + I+ + G+ LS+LP WH YER Y++ S+G +YT++R K D + +P
Sbjct: 232 QITTFGVILQPQPGESALSILPSWHAYERTVEYYLLSQGCTQIYTSIRYFKQDFKTCKPQ 291
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM+SVP +++++Y QKQ A ++ + L+ S Y +RI + L P
Sbjct: 292 YMVSVPRIWDSIYEAAQKQFREQPANKQKLVNFLLGTSLKYIQSRRIAQDLTLNLEPPTP 351
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ L A+I +L PLH + EKL+Y+K++ A G K +SGGGSL MH+D F+
Sbjct: 352 A------KKLTAQIKTILLLPLHAIGEKLIYQKVRQATGGQFKCAISGGGSLAMHLDNFF 405
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E G+ + VGYGLTE+SPV+ RRP N+ GS G P+ TEIKIVD ET + LP G G+
Sbjct: 406 EITGINLLVGYGLTETSPVLTVRRPWHNLRGSAGQPLPETEIKIVDPETRKPLPIGQIGL 465
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V RG Q+M GY+ NP AT +A+D++GW +TGD+GW+ G L+L GRAK
Sbjct: 466 VLGRGPQIMGGYYLNPQATAKAIDKEGWFDTGDLGWMT----------SGNDLILTGRAK 515
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVL+ GEN+EP +E+A+LRS+ I QI+++GQDQ+ GA+IVP+ E V K ++ +
Sbjct: 516 DTIVLTNGENIEPQPIEDASLRSAYIDQIMLVGQDQKFLGALIVPNHEAV---QKWIASL 572
Query: 418 HADASEL--SKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ E+ + + L EL + + +IG ++ EPF+V
Sbjct: 573 NPSLQEIDWNSKAVQDLFRQELNREVQNRPGYRPDDRIGSFRLILEPFSV 622
>gi|428222525|ref|YP_007106695.1| AMP-forming long-chain acyl-CoA synthetase [Synechococcus sp. PCC
7502]
gi|427995865|gb|AFY74560.1| AMP-forming long-chain acyl-CoA synthetase [Synechococcus sp. PCC
7502]
Length = 624
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 224/347 (64%), Gaps = 17/347 (4%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
+QI D+ E K +S+LP WH YER+ Y+IFS+G +YT +R++K DL+ +Q
Sbjct: 203 YQINGALDVFVVEPSKKVMSILPTWHSYERSFEYYIFSQGCTQIYTNLRSIKKDLKDFQA 262
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
+YM++VP ++E++Y G+QKQ A+++ + ++S AY +RI++G L
Sbjct: 263 NYMVAVPRLWESIYEGVQKQFREQPASKQKLINFFFKVSLAYIKARRIWQGLDLE----- 317
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLF 236
+ L + L A + L P+HLL ++LVYKK++ A G + VSGGGS+ +H++ F
Sbjct: 318 -NLAPTLGEKLIAGLTMLALTPVHLLGDRLVYKKVREATGGCLELVVSGGGSIALHLEDF 376
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
YE + + + GYGLTE+SP+ RRP N+ G P+ TE KI+D T + +PA +G
Sbjct: 377 YEIVNIPILSGYGLTETSPITHTRRPHRNIRNGDGQPLPKTETKIIDQITRQSVPAYCQG 436
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
IV +RG Q+MQGY+KNP+AT +A+D +GW ++GD+G++ P LV+ GRA
Sbjct: 437 IVTLRGPQIMQGYYKNPTATAKAIDPEGWFDSGDLGYVTPWDD----------LVITGRA 486
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
KDTIVLS GEN+EP +E+A LRS I QI+V+GQDQ++ GA+IVP+
Sbjct: 487 KDTIVLSNGENIEPQAIEDACLRSPFIDQIIVVGQDQKQLGALIVPN 533
>gi|443475739|ref|ZP_21065678.1| Long-chain-fatty-acid--CoA ligase [Pseudanabaena biceps PCC 7429]
gi|443019402|gb|ELS33497.1| Long-chain-fatty-acid--CoA ligase [Pseudanabaena biceps PCC 7429]
Length = 625
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/416 (38%), Positives = 249/416 (59%), Gaps = 32/416 (7%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
F+I ++ + +K LS+LP WH YER YFIFS+G +YT +R +K DL+ ++P
Sbjct: 201 FEIEGAQAVLKLKVSEKVLSILPTWHSYERTFEYFIFSQGCTQIYTNLRTIKKDLREHKP 260
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
YM++VP ++E++Y G+QKQ +++ + ++ S Y KR+ +G +
Sbjct: 261 DYMVAVPRLWESIYEGVQKQFREQPNSKQRLVDFFLKASQKYITAKRVIQGLNVA--NLS 318
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 236
PS L D L A +I LW +H L KLVY+K++ A G + K VSGGGS+ H++ F
Sbjct: 319 PS----LGDKLKASVIVLSLWAVHKLGHKLVYQKVREATGGNFKYIVSGGGSIAEHLEDF 374
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
YE +G+++ GYGLTE+SP+ RRP N+ G G P+ TE +IVD + LP G +G
Sbjct: 375 YEIVGIEILGGYGLTETSPITHVRRPNRNIRGGDGQPLIKTETRIVDISSRADLPVGQQG 434
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+V +RG QVMQGY+KNP AT +A+D GW +TGD+G+++P + L++ GRA
Sbjct: 435 LVLIRGPQVMQGYYKNPEATAKAIDPQGWFDTGDLGYVSPWND----------LIITGRA 484
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
KDTIVLS GEN+EP +E+A +RS+ I Q+V++GQDQ++ G +IVP+ L A + +
Sbjct: 485 KDTIVLSNGENIEPQPIEDACIRSNYIDQVVLVGQDQKQLGLLIVPN----LSALEAAGL 540
Query: 417 VHADAS------ELSKEKTISLLYGELRKWTSK-----CSFQIGPIHVVDEPFTVN 461
+ D++ L+ K SL E+ + + +IG + EPFT++
Sbjct: 541 IAPDSNLADILPALNDPKIRSLYREEINREVQNRPGYSVNDRIGVFEFLPEPFTID 596
>gi|428299082|ref|YP_007137388.1| long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 6303]
gi|428235626|gb|AFZ01416.1| Long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 6303]
Length = 657
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/414 (40%), Positives = 245/414 (59%), Gaps = 27/414 (6%)
Query: 57 NF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQR 114
NF QI +L I+ GDK LS+LP WH + R Y+ +G+ +Y+ R LK DLQ
Sbjct: 231 NFLHQISTLTAIIQPSVGDKTLSILPTWHSFGRVGEYYTLGQGVTQIYSNRRYLKQDLQD 290
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
Y P Y+I VP ++E++Y GIQK + + + ++ + +S Y R ++ L
Sbjct: 291 YTPQYVIGVPRLWESIYEGIQKSFRDKTPRMQKLIKSFLAVSKKYIKAVRTWKKIDLQNL 350
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
S ++ A I +L PLH L E +VYKKIQ A G K + GGGSL H+
Sbjct: 351 NPTTSQIIN------AWITTILLAPLHFLGEMIVYKKIQLATGGKVKQLICGGGSLAQHL 404
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
+ F+E +G+++ VGYGLTE+SPV++ARR N+ G+ G P+ TE+KIVD ET++ LP G
Sbjct: 405 EDFFEIVGIQILVGYGLTETSPVLSARRYYKNLRGASGLPLASTELKIVDLETHQPLPQG 464
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
+G+V +G Q+MQGY+ NP AT +A+D +GW +TGDIGW+ P + +VL
Sbjct: 465 KRGLVMAKGPQIMQGYYLNPEATSKAIDSEGWFDTGDIGWLTPDNQ----------IVLT 514
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAA 411
GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVPD E E + +
Sbjct: 515 GRAKDTIVLTNGENIEPQPIEDACLRSDYIDQIMLVGQDQKSLGALIVPDLEILESWLLS 574
Query: 412 KRLSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
K IV+ + L+ + L+ EL + + +I ++ EPFT+
Sbjct: 575 KNQPIVNGEIG-LNNQMIRDLIREELNREVRDRKGYRRDDEIIVFEIIPEPFTI 627
>gi|186686430|ref|YP_001869626.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102]
gi|186468882|gb|ACC84683.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102]
Length = 649
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/410 (40%), Positives = 249/410 (60%), Gaps = 24/410 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI + ++ GD LS+LP WH YER Y++ S+G +YT +R++K DL++++P+
Sbjct: 227 QITTFGTVLQPNAGDIVLSILPSWHSYERTVEYYLLSQGCTQIYTNLRSVKGDLRQFKPN 286
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM+ VP ++E++Y G+QKQ A ++ + L+ IS Y +R+ +G L
Sbjct: 287 YMVGVPRLWESIYEGVQKQFREQPAKKQRLINFLLGISDKYIKARRVAQGLDLN------ 340
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
+ + I+ L A+I A L PLH L E+LVY K++ A G K +SGGG+LP HID F+
Sbjct: 341 NLHASAIERLTAKIQAAALLPLHALGERLVYAKVREATGGHVKQMISGGGALPRHIDNFF 400
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E IGV++ GYGLTE+SPV RRP N++G+ G P+ TE KIVD ET LP +G+
Sbjct: 401 EIIGVQILQGYGLTETSPVTHVRRPWRNLIGASGLPLPATEAKIVDPETKAPLPIEKRGL 460
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG Q+MQGY++NP AT +A+D +GW ++GD+GW+ P LVL GRAK
Sbjct: 461 VLLRGPQIMQGYYQNPEATAKAIDAEGWFDSGDLGWLTPQDD----------LVLTGRAK 510
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
DTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A+
Sbjct: 511 DTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSLGALIVPNVEALEKWAQNDPAT 570
Query: 418 HADASELSKEKTI--SLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ + ++ E + L EL + + +IG ++ EPF++
Sbjct: 571 SSPSQKIDLESRMIQDLFRQELNREVQNRPGYRPDDRIGTFKLILEPFSI 620
>gi|307154624|ref|YP_003890008.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
gi|306984852|gb|ADN16733.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
Length = 637
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 249/419 (59%), Gaps = 33/419 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI + + E GD+ LS+LP WH YER Y++ S+G+ +YT +R+ K+DL+R+QPH
Sbjct: 206 QIINFGTVFQPEPGDRVLSILPSWHSYERTVEYYVLSQGVTQIYTNLRSFKNDLKRFQPH 265
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E++Y GIQKQ +A ++ + ++ S Y +RI L
Sbjct: 266 LMVGVPRLWESVYEGIQKQFREQNANKQKLVNFFLKQSENYILAQRIANNLSLNHLNASA 325
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S + L A++ A+L PLH L ++L+Y+K++ +G + KA +SGGGSL HID FY
Sbjct: 326 S------ERLQAKLKAALLAPLHALGDRLIYEKVREGVGKNVKAWISGGGSLARHIDTFY 379
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E + + V VGYGLTE+SPV R N+ GS G P+ +TEI+IVD ET + LP +G+
Sbjct: 380 EIVNIPVLVGYGLTETSPVTNVRTLERNLRGSCGTPLRYTEIRIVDPETRQELPVEQQGL 439
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+K P AT + +D GW ++GD+GW+ P + LV+ GRAK
Sbjct: 440 VLIRGPQVMQGYYKKPEATAKVIDPQGWFDSGDLGWVTPMND----------LVISGRAK 489
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR---- 413
DTIVLS GEN+EP +E+A +RS I QI+++GQDQ+ GA+IVP+ + + AK+
Sbjct: 490 DTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQDQKALGALIVPNLDALQTWAKQQQLD 549
Query: 414 -------LSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
SI AS LS + +LL EL + + QI ++ EPF++
Sbjct: 550 LEIPGPEASIEEIHASSLSSKPVQNLLRQELNRLVKDRPGYRADDQIKEFELILEPFSI 608
>gi|443312969|ref|ZP_21042583.1| AMP-forming long-chain acyl-CoA synthetase [Synechocystis sp. PCC
7509]
gi|442777119|gb|ELR87398.1| AMP-forming long-chain acyl-CoA synthetase [Synechocystis sp. PCC
7509]
Length = 629
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 244/401 (60%), Gaps = 23/401 (5%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPL 125
+V + G+ +S+LP WH YER+ YFI + G +YT +R +K D + ++P YM+ VP
Sbjct: 217 VVEPQPGEVVMSILPIWHCYERSFEYFILAHGCTQIYTNIRYVKKDFKEFKPFYMVGVPR 276
Query: 126 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 185
++E++Y G+QKQ SA ++ + S Y +R+ +G L N PS L L
Sbjct: 277 LWESIYEGVQKQFREQSANKQKLINFFFAQSQRYIMARRVVQGLDL--NNLYPSSLAKL- 333
Query: 186 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 244
WARI L +H LA+K++YK+++ A G K VSGGGS+ H++ FYE +GV +
Sbjct: 334 ---WARIQIIPLGLIHQLADKIIYKQVREATGGKVKFLVSGGGSIAEHLEDFYEIVGVDI 390
Query: 245 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 304
GYGLTE+SP+ RR N+ G+ G P+ TE +IV+ E+++ LP G KG+V +RGSQ
Sbjct: 391 LGGYGLTETSPITHVRRTWRNLRGADGQPLPDTETQIVELESHKPLPVGKKGLVMIRGSQ 450
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
VMQGY+KNP AT +A++ +GW NTGD+GW++ + LV+ GRAKDTIVLS
Sbjct: 451 VMQGYYKNPEATAKAINSEGWFNTGDLGWVSKQND----------LVITGRAKDTIVLSN 500
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 424
GEN+EP +E A LRS I QI+++GQD+R GA+IVP+++ + A + D S L
Sbjct: 501 GENIEPQPIENACLRSPYIDQIMLVGQDERSLGALIVPNQDALQQWATTQNPA-IDPSNL 559
Query: 425 SKEKTISLLYGEL-RKWTSKCSF----QIGPIHVVDEPFTV 460
+ + L E+ R+ ++ + +I ++ EPF++
Sbjct: 560 GNKAILDLYRLEVSREVQNRPGYRPDERISTFKLIAEPFSI 600
>gi|407957499|dbj|BAM50739.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
Length = 609
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 162/379 (42%), Positives = 227/379 (59%), Gaps = 19/379 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R L ++ GD+ LS+LP WH ER+ YF+ SRG + YT++R+ K D++ +PH
Sbjct: 179 QVRELDSVIIPRPGDQVLSILPCWHSLERSAEYFLLSRGCTMNYTSIRHFKGDVKDIKPH 238
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+++ VP ++E+LY G+QK S ++ + IS Y KRI L N
Sbjct: 239 HIVGVPRLWESLYEGVQKTFREKSPGQQKLINFFFGISQKYILAKRIANNLSL--NHLHA 296
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKI-QSAIGISKAGVSGGGSLPMHIDLFY 237
S + L+ AR +L PLH L +K+VY K+ Q+A G + +SGGG+L H+D FY
Sbjct: 297 SAIARLV----ARCQALVLSPLHYLGDKIVYHKVRQAAGGRLETLISGGGALARHLDDFY 352
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E + V VGYGLTE++PV AR N+ S G PI TEI+IVD ET E LP ++G+
Sbjct: 353 EITSIPVLVGYGLTETAPVTNARVHKHNLRYSSGRPIPFTEIRIVDMETKEDLPPETQGL 412
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+ P AT + LD++GW ++GD+GW+ P + L+L GRAK
Sbjct: 413 VLIRGPQVMQGYYNKPEATAKVLDQEGWFDSGDLGWVTPQND----------LILTGRAK 462
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMAAKRLS 415
DTIVLS GENVEP +E+A LRS+ I QI+++GQDQ+ GA+IVP D + K L
Sbjct: 463 DTIVLSNGENVEPQPIEDACLRSAYIDQIMLVGQDQKSLGALIVPNFDALQKWAETKNLQ 522
Query: 416 IVHADASELSKEKTISLLY 434
I + S S+ S LY
Sbjct: 523 ITVPEPSASSEGMQASGLY 541
>gi|383321357|ref|YP_005382210.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324527|ref|YP_005385380.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490411|ref|YP_005408087.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435677|ref|YP_005650401.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|339272709|dbj|BAK49196.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|359270676|dbj|BAL28195.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273847|dbj|BAL31365.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277017|dbj|BAL34534.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-P]
Length = 636
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/379 (42%), Positives = 227/379 (59%), Gaps = 19/379 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R L ++ GD+ LS+LP WH ER+ YF+ SRG + YT++R+ K D++ +PH
Sbjct: 206 QVRELDSVIIPRPGDQVLSILPCWHSLERSAEYFLLSRGCTMNYTSIRHFKGDVKDIKPH 265
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+++ VP ++E+LY G+QK S ++ + IS Y KRI L N
Sbjct: 266 HIVGVPRLWESLYEGVQKTFREKSPGQQKLINFFFGISQKYILAKRIANNLSL--NHLHA 323
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKI-QSAIGISKAGVSGGGSLPMHIDLFY 237
S + L+ AR +L PLH L +K+VY K+ Q+A G + +SGGG+L H+D FY
Sbjct: 324 SAIARLV----ARCQALVLSPLHYLGDKIVYHKVRQAAGGRLETLISGGGALARHLDDFY 379
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E + V VGYGLTE++PV AR N+ S G PI TEI+IVD ET E LP ++G+
Sbjct: 380 EITSIPVLVGYGLTETAPVTNARVHKHNLRYSSGRPIPFTEIRIVDMETKEDLPPETQGL 439
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+ P AT + LD++GW ++GD+GW+ P + L+L GRAK
Sbjct: 440 VLIRGPQVMQGYYNKPEATAKVLDQEGWFDSGDLGWVTPQND----------LILTGRAK 489
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMAAKRLS 415
DTIVLS GENVEP +E+A LRS+ I QI+++GQDQ+ GA+IVP D + K L
Sbjct: 490 DTIVLSNGENVEPQPIEDACLRSAYIDQIMLVGQDQKSLGALIVPNFDALQKWAETKNLQ 549
Query: 416 IVHADASELSKEKTISLLY 434
I + S S+ S LY
Sbjct: 550 ITVPEPSASSEGMQASGLY 568
>gi|16329616|ref|NP_440344.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|1652099|dbj|BAA17024.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
Length = 696
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/379 (42%), Positives = 227/379 (59%), Gaps = 19/379 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R L ++ GD+ LS+LP WH ER+ YF+ SRG + YT++R+ K D++ +PH
Sbjct: 266 QVRELDSVIIPRPGDQVLSILPCWHSLERSAEYFLLSRGCTMNYTSIRHFKGDVKDIKPH 325
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+++ VP ++E+LY G+QK S ++ + IS Y KRI L N
Sbjct: 326 HIVGVPRLWESLYEGVQKTFREKSPGQQKLINFFFGISQKYILAKRIANNLSL--NHLHA 383
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKI-QSAIGISKAGVSGGGSLPMHIDLFY 237
S + L+ AR +L PLH L +K+VY K+ Q+A G + +SGGG+L H+D FY
Sbjct: 384 SAIARLV----ARCQALVLSPLHYLGDKIVYHKVRQAAGGRLETLISGGGALARHLDDFY 439
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E + V VGYGLTE++PV AR N+ S G PI TEI+IVD ET E LP ++G+
Sbjct: 440 EITSIPVLVGYGLTETAPVTNARVHKHNLRYSSGRPIPFTEIRIVDMETKEDLPPETQGL 499
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+ P AT + LD++GW ++GD+GW+ P + L+L GRAK
Sbjct: 500 VLIRGPQVMQGYYNKPEATAKVLDQEGWFDSGDLGWVTPQND----------LILTGRAK 549
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMAAKRLS 415
DTIVLS GENVEP +E+A LRS+ I QI+++GQDQ+ GA+IVP D + K L
Sbjct: 550 DTIVLSNGENVEPQPIEDACLRSAYIDQIMLVGQDQKSLGALIVPNFDALQKWAETKNLQ 609
Query: 416 IVHADASELSKEKTISLLY 434
I + S S+ S LY
Sbjct: 610 ITVPEPSASSEGMQASGLY 628
>gi|451813776|ref|YP_007450228.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|451779745|gb|AGF50714.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
Length = 696
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/346 (44%), Positives = 216/346 (62%), Gaps = 17/346 (4%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R L ++ GD+ LS+LP WH ER+ YF+ SRG + YT++R+ K D++ +PH
Sbjct: 266 QVRELDSVIIPRPGDQVLSILPCWHSLERSAEYFLLSRGCTMNYTSIRHFKGDVKDIKPH 325
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+++ VP ++E+LY G+QK S ++ + IS Y KRI L N
Sbjct: 326 HIVGVPRLWESLYEGVQKTFREKSPGQQKLINFFFGISQKYILAKRIANNLSL--NHLHA 383
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKI-QSAIGISKAGVSGGGSLPMHIDLFY 237
S + L+ AR +L PLH L +K+VY K+ Q+A G + +SGGG+L H+D FY
Sbjct: 384 SAIARLV----ARCQALVLSPLHYLGDKIVYHKVRQAAGGRLETLISGGGALARHLDDFY 439
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
E + V VGYGLTE++PV AR N+ S G PI TEI+IVD ET E LP ++G+
Sbjct: 440 EITSIPVLVGYGLTETAPVTNARVHKHNLRYSSGRPIPFTEIRIVDMETKEDLPPETQGL 499
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V +RG QVMQGY+ P AT + LD++GW ++GD+GW+ P + L+L GRAK
Sbjct: 500 VLIRGPQVMQGYYNKPEATAKVLDQEGWFDSGDLGWVTPQND----------LILTGRAK 549
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
DTIVLS GENVEP +E+A LRS+ I QI+++GQDQ+ GA+IVP+
Sbjct: 550 DTIVLSNGENVEPQPIEDACLRSAYIDQIMLVGQDQKSLGALIVPN 595
>gi|302835167|ref|XP_002949145.1| hypothetical protein VOLCADRAFT_120723 [Volvox carteri f.
nagariensis]
gi|300265447|gb|EFJ49638.1| hypothetical protein VOLCADRAFT_120723 [Volvox carteri f.
nagariensis]
Length = 643
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 167/377 (44%), Positives = 234/377 (62%), Gaps = 25/377 (6%)
Query: 57 NFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 116
+Q+R+L + + GD+ LS+LPPWH+YER C YF+ SRG + +YT +R L+DDL +
Sbjct: 209 TYQVRNLSYFLAVQPGDRVLSLLPPWHIYERTCSYFVLSRGGQQVYTNIRRLRDDLTAFT 268
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT----AFKRIYEGFCLT 172
P + + VPLV +TL++ +++++ R +A AL+ AY A + +G T
Sbjct: 269 PDHFVCVPLVLDTLHARVRQRLAAGPRHRAAIATALLAAGAAYHALPPADRGTSDGLVAT 328
Query: 173 RNQKQPSYLVALIDWLWARIICAILW-----PLHLLAEKLVYKKIQSAIGISKAGVSGGG 227
A + WA+I+ A + PLH LA KLVY KI+ A+GI K VSGGG
Sbjct: 329 ---------AAGLARRWAQILGAAVLAALLTPLHWLASKLVYGKIREALGIRKTVVSGGG 379
Query: 228 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR---PTCNVLGSVGHPINHTEIKIVDA 284
SL H+D FYEA+G+ V G+GLTE+SPV+A RR P N+ GSVG P T++++VD
Sbjct: 380 SLAAHLDDFYEALGLPVLNGWGLTETSPVLACRRSDPPEQNIRGSVGVPTPGTQLRVVDP 439
Query: 285 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE-DGWLNTGDIGWIAPHHSRGRS 343
ET + LP G +G+V G VM GYF + AT +A DGW +TGD+GW+AP G
Sbjct: 440 ETLDPLPEGRQGLVLANGPGVMAGYFLDEEATARAFRAGDGWFDTGDLGWVAPTGVTG-- 497
Query: 344 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
RC G LVL GRAKDTIVLS+G+NVEP +E+A S LI+ +V++GQD+R GA++ PD
Sbjct: 498 SRCAGHLVLTGRAKDTIVLSSGKNVEPQPIEDAVAASGLIKHVVLVGQDKRELGALVWPD 557
Query: 404 KEEVLMAAKRLSIVHAD 420
E+ L A S+ A+
Sbjct: 558 -EDALSATPENSLSPAE 573
>gi|352096361|ref|ZP_08957241.1| AMP-dependent synthetase and ligase [Synechococcus sp. WH 8016]
gi|351677055|gb|EHA60206.1| AMP-dependent synthetase and ligase [Synechococcus sp. WH 8016]
Length = 648
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 161/390 (41%), Positives = 233/390 (59%), Gaps = 26/390 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+RSL + E G LS+LP WH YER+ Y+ FS YT ++ LK DL R +P
Sbjct: 227 QMRSLSCVARPEPGAPVLSVLPIWHAYERSAEYYFFSCACSQSYTTIKQLKRDLPRVKPV 286
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M++VP ++E + +G + + T A+R+ + RA + S AY CL R Q++
Sbjct: 287 VMVTVPRLWEAVQAGFEDVLKTFPASRQRLLRAALANSSAY----------CLARRQRRN 336
Query: 179 SYLVAL--IDWLWARIICAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHID 234
L+ L + AR+ A WP H LA KL++ K+ Q + G + ++GGG++ H+D
Sbjct: 337 LMLMPLGRRQRMMARLKSAGRWPAHALASKLIWPKLRLQLSGGQLRFPINGGGAIAPHVD 396
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVDAET + L
Sbjct: 397 SFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGQPLPDTEFRIVDAETRQPLGFRE 456
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
G+V VRG QVM GY + P AT + LD DGW +TGD+G + P G +VL G
Sbjct: 457 CGVVLVRGPQVMAGYLRRPEATAKVLDADGWFDTGDLGMLLPD----------GSVVLTG 506
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM-AAKR 413
RAKDTIVLS+GEN+EP LEE + S LI Q++++GQDQR+ A++VP E +L A++
Sbjct: 507 RAKDTIVLSSGENIEPAPLEEELVSSPLIEQVMLVGQDQRQLAALVVPRLEAMLAWGAEQ 566
Query: 414 LSIVHADASELSKEKTI-SLLYGELRKWTS 442
+ AD ++ + LL GEL + S
Sbjct: 567 GLRLPADLGGTPGDQDLRRLLRGELNRLLS 596
>gi|254431287|ref|ZP_05044990.1| long-chain-fatty-acid--CoA ligase [Cyanobium sp. PCC 7001]
gi|197625740|gb|EDY38299.1| long-chain-fatty-acid--CoA ligase [Cyanobium sp. PCC 7001]
Length = 663
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/349 (41%), Positives = 220/349 (63%), Gaps = 20/349 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R L V GD+ +S+LP WH YER+ YF+ + G YT +++L+ DLQR +PH
Sbjct: 246 QLRHLGVAVTPHPGDRVVSVLPIWHSYERSAEYFLLACGCHQSYTTLKHLRPDLQRVRPH 305
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVP ++E + SG + + +R+ + RA + S A +R L R++ P
Sbjct: 306 YLISVPRLWEAILSGFEDALRAMPTSRQRLLRAALANSRAQALARRRARDLTL-RHEPLP 364
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLF 236
+ + A ++ L + WPLH LAE +++ K++S + G + +SGGG+L +H+D F
Sbjct: 365 TRVCAAVEAL-------LRWPLHRLAEAVLWPKVRSQLVGGRLRTAISGGGALALHVDAF 417
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EAIG+++ VGYGLTE+SPV+ RRP N GS G P+ T I+I D ET++ + G +G
Sbjct: 418 FEAIGIELLVGYGLTETSPVLTCRRPWANRRGSAGQPLPGTAIRIADPETHQPVAVGRRG 477
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+V RG QVM GY++ P A+ + LD +GW +TGD+G + P G LVL GRA
Sbjct: 478 LVLARGPQVMGGYWRKPEASAKVLDGEGWFDTGDLGHLLPD----------GSLVLTGRA 527
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
KDTIVLS+GEN+EP LE+A + S LI Q++++GQD+++ G ++VP E
Sbjct: 528 KDTIVLSSGENIEPGPLEDALVASPLIEQVMLVGQDRKQLGGLLVPRPE 576
>gi|427702586|ref|YP_007045808.1| AMP-forming long-chain acyl-CoA synthetase [Cyanobium gracile PCC
6307]
gi|427345754|gb|AFY28467.1| AMP-forming long-chain acyl-CoA synthetase [Cyanobium gracile PCC
6307]
Length = 653
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 161/414 (38%), Positives = 238/414 (57%), Gaps = 31/414 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L V GD LS+LP WH YER YF+ S G YT ++ L+ DLQ+ +P
Sbjct: 226 QLRTLGVAVSPSPGDHVLSVLPIWHAYERTAEYFLLSCGCRQTYTTLKQLRSDLQKVRPQ 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVP ++E L SG + + +R+ + R + +S A+ +R L +P
Sbjct: 286 YLISVPRLWEALLSGFEDALAAMPPSRQRLLRRALAVSRAFHRRRRTALDLTL-----KP 340
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLF 236
V D L A +LWPLH A L++ K+++ + G + +SGGG+L +H+D F
Sbjct: 341 ---VGAADRLVAAAGALLLWPLHGAAGALLWPKVRAQLVGGRLRTAISGGGALAIHVDGF 397
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EA+G+++ VGYGLTE+SPV+A RRP N GS G P+ T +K+VD T LP G +G
Sbjct: 398 FEAVGIELLVGYGLTETSPVLACRRPWSNRRGSAGQPLPDTALKVVDPATRTPLPVGERG 457
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+V RG QVM GY P AT + LD +GW +TGD+G + G LVL GRA
Sbjct: 458 LVLARGPQVMGGYHNKPEATAKVLDGEGWFDTGDLGLLL----------ADGTLVLTGRA 507
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA-AKRLS 415
KDTIVLS+GEN+EP LEEA + S L+ Q++++GQD+++ GA++VP K EVL A A
Sbjct: 508 KDTIVLSSGENIEPGPLEEALVASPLVEQVMLVGQDRKQLGALVVP-KAEVLQAFAATAQ 566
Query: 416 IVHADASELSKEKTISLLYGELRKWT--------SKCSFQIGPIHVVDEPFTVN 461
+ D + +LL R+ ++ ++G + +V EPF+++
Sbjct: 567 LPCPDPGDPGAGADPALLRALCRECNRLLAARPGTRADERLGGVALV-EPFSID 619
>gi|148242895|ref|YP_001228052.1| long-chain acyl-CoA synthetase [Synechococcus sp. RCC307]
gi|147851205|emb|CAK28699.1| Long-chain acyl-CoA synthetase [Synechococcus sp. RCC307]
Length = 650
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 205/347 (59%), Gaps = 22/347 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L V + G++ LS+LP WH YER+ GY + SRG YT +R K DLQR +PH
Sbjct: 225 QVRTLGVAVSPQPGERVLSVLPIWHAYERSAGYLLLSRGCSQSYTNLRQFKGDLQRVRPH 284
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC---LTRNQ 175
Y+ISVP ++E LY G Q + A+++ + R + S + R + L ++
Sbjct: 285 YLISVPRLWEALYGGFQGALEGMPASKQKLLRTALAASQTHARSLRQWRDLADHPLLWSE 344
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL 235
+ +A + W+ A + +LWP + Q A G +SGGG+LP HID
Sbjct: 345 RLAGLALAGLSWVPAALAGQLLWP---------AVRRQLAGGSLGTAISGGGALPKHIDA 395
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+EAIG+++ VGYGLTE+SPV++ RR N GS G P+ TE+KIVD ++ L G +
Sbjct: 396 FFEAIGIELLVGYGLTETSPVLSCRRRWANRRGSAGRPLPGTELKIVDPDSRRTLQQGER 455
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G+V RG QVM+GY P AT + LD + W NTGD+G + G L L GR
Sbjct: 456 GLVLARGPQVMKGYLNRPEATGEVLDTEAWFNTGDLGHLL----------ADGSLFLTGR 505
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
AKDTIVLS+GEN+EP LE+ S L+ Q++V+GQDQR+ GA++VP
Sbjct: 506 AKDTIVLSSGENIEPGPLEDELAASELVEQVMVVGQDQRQLGALVVP 552
>gi|317969072|ref|ZP_07970462.1| long-chain acyl-CoA synthetase [Synechococcus sp. CB0205]
Length = 638
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 220/368 (59%), Gaps = 20/368 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+RSL V GD+ LS+LP WH YER+ YF+ S G + YT +++L+ DLQR +PH
Sbjct: 225 QLRSLGVAVAPRPGDRVLSVLPIWHAYERSAEYFLLSCGCQQTYTTLKHLRPDLQRVRPH 284
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVP ++E L SG + + A+R + R+ +++S + +R+ L +K+
Sbjct: 285 YLISVPRLWEALLSGFEDALSAMPASRAKLLRSALKVSRFHCLSRRVAADRTLIPERKRR 344
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLF 236
A + WPLH +AE+L + K+++ + G + +SGGG+L +H+D F
Sbjct: 345 RLAAA--------AGALLSWPLHGVAEQLFWPKVRAQLIGGRLRTAISGGGALAIHVDGF 396
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EAIG+++ VGYGLTE+SPV+ RR N GS G P+ T IKI D E+ VL G +G
Sbjct: 397 FEAIGIELLVGYGLTETSPVLTCRRRWNNRRGSSGQPLAGTSIKITDPESGAVLAIGERG 456
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
V +G+QVM GY P AT + LD +GW +TGD+G + G LVL GRA
Sbjct: 457 KVLAKGAQVMGGYLGKPEATAKVLDAEGWFDTGDLGHLL----------ADGTLVLTGRA 506
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
KDTIVLS+GEN+EP LEE + SL+ Q++++GQD++ GA++VP E + A +
Sbjct: 507 KDTIVLSSGENIEPGPLEECLVACSLVEQVMLVGQDRKALGALVVPKLENLEAFAAEQGM 566
Query: 417 VHADASEL 424
AD + L
Sbjct: 567 SAADPALL 574
>gi|449019989|dbj|BAM83391.1| long-chain-fatty-acid CoA ligase [Cyanidioschyzon merolae strain
10D]
Length = 824
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 225/356 (63%), Gaps = 21/356 (5%)
Query: 55 MTNFQIRSLYDIVPAEN---GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 111
M N R+ ++P+++ GD +++LP WH++ER + SRG+ ++Y+ + + K+D
Sbjct: 368 MANSFSRAWRPLLPSQDASAGDVMVNILPCWHIFERIGELYALSRGVSMVYSKLLHFKED 427
Query: 112 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 171
L R++PH ++ VP +YE++Y GI+ Q+ RR + L+ IS + ++RI +G
Sbjct: 428 LARHRPHLLVGVPRLYESIYQGIKSQLMKQGRFRRALIFGLLGISTRFVQWRRIRDGALF 487
Query: 172 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSL 229
R+ V+ ++ ++A + +LWPLH+LA + +++++ G + VSGGGSL
Sbjct: 488 DRH-------VSTLERIYAGLWTLLLWPLHMLANLIAWRQLRRMALGGRVRTLVSGGGSL 540
Query: 230 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 289
M +D F+EAIGV + VGYGLTE+SPV+A R N+ G+ G + T++KIVD ET +
Sbjct: 541 AMFLDDFFEAIGVLLIVGYGLTETSPVLANRLREHNIRGTTGLVVPGTQVKIVDPETRQT 600
Query: 290 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 349
LP G GI+ RG Q+ QGY+K+P+AT + +D +G+ +TGD+G+ + + G
Sbjct: 601 LPPGQTGIICARGEQIFQGYYKDPAATARVIDSEGYFDTGDLGFFSQYT---------GD 651
Query: 350 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
LV+ GR KD IVL+ GEN+EP +E+A L S I Q++++GQDQR GA+IVP+ E
Sbjct: 652 LVIAGRLKDVIVLNNGENIEPTPIEDAMLGSDYIDQVMLVGQDQRALGALIVPNLE 707
>gi|87301166|ref|ZP_01084007.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
5701]
gi|87284134|gb|EAQ76087.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
5701]
Length = 653
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 233/411 (56%), Gaps = 27/411 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R+L V D+ LS+LP WH YER YF+ S G YT +++L+ DLQR +P
Sbjct: 233 QLRTLGVAVAPRPADRVLSVLPIWHAYERTAEYFLLSCGCRQSYTTLKHLRPDLQRVRPQ 292
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YMISVP ++E L +G + + +R+ + R +R+S + +R L ++ P
Sbjct: 293 YMISVPRLWEALLAGFEDALEAMPPSRQGLIRQALRLSRWHGQSRRRALDLTL-ESESLP 351
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLF 236
L A + WL + WP H LA L++ K++ + G + +SGGG+L +H+D F
Sbjct: 352 GRLAAGLGWL-------LSWPGHGLASVLLWPKVRQQLSGGALRTAISGGGALALHVDGF 404
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EAIG+++ VGYGLTE+SPV+A RRP N GS G P+ TE++IVD ++ L +G
Sbjct: 405 FEAIGIELLVGYGLTETSPVLACRRPWRNRRGSAGQPLPETELRIVDPDSGAALGWRQRG 464
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
V RG QVM GYF P AT LD GW +TGD+G + G LVL GRA
Sbjct: 465 RVLARGPQVMAGYFGKPEATAAVLDAAGWFDTGDLGHLL----------ADGTLVLTGRA 514
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
KDTIVLS+GEN+EP LEEA + L+ Q++++GQD+R+ A++VP E + A+ +
Sbjct: 515 KDTIVLSSGENIEPGPLEEALVAHPLVEQVMLVGQDRRQLAALVVPRPEPLAAFARAREL 574
Query: 417 -VHADASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPFTVN 461
V ++ + + L GE + S+ ++ + +V EPF++
Sbjct: 575 PVPGTTADPADRALLKALSGEFNRLLAARPGSRPDERLAGVALV-EPFSIE 624
>gi|384252453|gb|EIE25929.1| long-chain-fatty-acid CoA ligase [Coccomyxa subellipsoidea C-169]
Length = 476
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 206/347 (59%), Gaps = 42/347 (12%)
Query: 57 NFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 116
+Q+ +L + + G++ LS+LPPWH+YER+CGY++FSR +YT +R ++DL Y
Sbjct: 104 KYQMDNLSFFLKPKPGERSLSLLPPWHIYERSCGYYLFSRACTQVYTNIRKFREDLSAYP 163
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
PH+ + VP+V +TLY +Q+QI SS +R +AR I AY +RI +G
Sbjct: 164 PHHFVCVPMVLDTLYGRVQQQIKKSSLVKRTIARLFFAIGAAYIRARRILDGV------- 216
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLF 236
LV+ KI++A+GI +SGGGSL H+D F
Sbjct: 217 ------------------------------LVFGKIRAALGIMSTVISGGGSLARHLDDF 246
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
YE + + V G+GLTE+SPV++ RR NV GSVG PI T +++VD ET +P G
Sbjct: 247 YETLALPVLNGWGLTETSPVLSCRRDATRENVRGSVGLPIPGTVVRVVDPETLRPVPEGQ 306
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQA-LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
+G++ +G VM+GYF + +AT +A + DGW +TGD+GW AP G + G +VL
Sbjct: 307 QGLLLAKGPGVMKGYFNDEAATAKAFVAGDGWFDTGDLGWRAPTGVAGSN--MAGHIVLT 364
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 400
GRAKDTIVLS+GENVEP +E+A S I+ +V++GQD R GA++
Sbjct: 365 GRAKDTIVLSSGENVEPAPIEDACAVSPFIQHLVLVGQDHRMLGALV 411
>gi|254421740|ref|ZP_05035458.1| AMP-binding enzyme, putative [Synechococcus sp. PCC 7335]
gi|196189229|gb|EDX84193.1| AMP-binding enzyme, putative [Synechococcus sp. PCC 7335]
Length = 640
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 239/411 (58%), Gaps = 31/411 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +V K LS+LP WH YER+ YF+ S+G +YT +R +K D + + P
Sbjct: 222 QIAGASSVVNVGPEQKVLSILPIWHCYERSFEYFVLSQGCTQIYTNIRTVKRDFKEHSPQ 281
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
YM++VP ++E++Y G+Q+Q + ++ + R + Y +R G L
Sbjct: 282 YMVAVPRLWESIYDGVQRQFQSQPEGKQKLIRFFLEKGHEYITARRTLSGLRLDH----- 336
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLF 236
+ + L A + A LWP++ + +++V+ KI+ A+G K VSGGGS+ +++ F
Sbjct: 337 -LTSSTGEKLAAALKLAYLWPIYQIGDRIVFSKIREAMG-GKVDFLVSGGGSIADYLEDF 394
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
YE +G+ + GYGLTE+SP+ RRP N+ G+ G + TE IVD ET + +P G G
Sbjct: 395 YEVVGIPILGGYGLTETSPITHVRRPWRNLRGADGQALPGTETAIVDPETRQPIPIGKPG 454
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+V +RG QVM+GY+KN AT +A+D +GW +TGD+G + G L++ GRA
Sbjct: 455 LVLLRGPQVMKGYYKNAEATAKAIDSEGWFDTGDLGRLTDW----------GDLIITGRA 504
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRL 414
KDTIVL+ GEN+EP +E A LRS + QI+++GQDQ+ GA+IVP+KE E A+K +
Sbjct: 505 KDTIVLTNGENIEPTPVENACLRSPYVDQIMLVGQDQKSVGALIVPNKEVLEKWAASKGV 564
Query: 415 SIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
S+ +L+ + L EL++ S + ++GP +++EPFT+
Sbjct: 565 SM-----EDLNSKPIQDLYKQELKREISARPGYRPDERVGPFVLLEEPFTI 610
>gi|318042187|ref|ZP_07974143.1| long-chain acyl-CoA synthetase [Synechococcus sp. CB0101]
Length = 644
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 211/350 (60%), Gaps = 22/350 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R L V + GD+ LS+LP WH YER+ YF+ + G YT ++ L+ DLQR +PH
Sbjct: 225 QLRHLGVAVAPQPGDRVLSVLPIWHAYERSAEYFLLACGCAQTYTNLKQLRPDLQRVRPH 284
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ISVP ++E L G + + +AR+ + R+ + +S + +R+ L
Sbjct: 285 YLISVPRLWEALLGGFEDALAAMPSARQKLLRSALGLSRYHCLSRRVAADRTLAPEPAGR 344
Query: 179 SYLVALIDWLWARIICAIL-WPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDL 235
L A A+L WPLH LA ++++ K++ + G + +SGGG+L +H+D
Sbjct: 345 RLLAA---------GGALLSWPLHGLASRVLWPKVRQQLIGGRLRTAISGGGALAIHVDG 395
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+EA+G+++ VGYGLTE+SPV+ RR N GS G P+ T I+IVD E+ +L G +
Sbjct: 396 FFEAVGIELLVGYGLTETSPVLTCRRRWNNRRGSSGQPLPGTAIRIVDPESGALLQIGQR 455
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G V +G QVMQGY P AT + LD++GW +TGD+G + G LVL GR
Sbjct: 456 GRVLAQGPQVMQGYLGKPEATAKVLDQEGWFDTGDLGQLL----------ADGTLVLTGR 505
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
AKDTIVLS+GEN+EP LEE + +L+ Q++V+GQD++ GA++VP E
Sbjct: 506 AKDTIVLSSGENIEPGPLEECLVACTLVEQVMVVGQDRKALGALVVPKLE 555
>gi|87125603|ref|ZP_01081448.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9917]
gi|86166903|gb|EAQ68165.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9917]
Length = 648
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 235/412 (57%), Gaps = 28/412 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+RSL + E G LS+LP WH YER+ Y+ FS YT ++ LK DL R +P
Sbjct: 227 QMRSLACVARPEPGTPVLSVLPIWHAYERSAEYYFFSCACSQSYTTIKQLKRDLPRVKPV 286
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M++VP ++E + +G + + T A+R+ + RA + S AY +R L +P
Sbjct: 287 VMVTVPRLWEAVQAGFEDVLKTFPASRQRLLRAALANSSAYGLARRRSRNLML-----EP 341
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHIDLF 236
V D L AR WP H LA +L++ K+ Q + G + ++GGG++ H+D F
Sbjct: 342 ---VRRRDRLAARAEALRRWPAHALASRLIWPKLRLQLSGGQLRYPINGGGAIAPHVDAF 398
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD ++ L +G
Sbjct: 399 FEAVGIELLVGYGLTETSPVVSCRRPWHNIRGSSGLPMPDTEFRIVDPDSRAPLGFPQRG 458
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+V VRG QVM GY P AT + LD DGW +TGD+G + P G +VL GRA
Sbjct: 459 VVLVRGPQVMAGYLGKPEATAKVLDADGWFDTGDLGMLLPD----------GSVVLTGRA 508
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRL 414
KDTIVLS+GEN+EP LEEA + S LI Q++++GQD+R+ GA++VP E A + L
Sbjct: 509 KDTIVLSSGENIEPGPLEEALVASDLIEQVMLVGQDERQLGALVVPRAEAMRAWAADQGL 568
Query: 415 SIVHADASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPFTVN 461
+ + + LL GEL + S+ ++ I +V EPF++
Sbjct: 569 QLAEDLGGSPGDDNLLRLLRGELNRLLSQRPGSRADERLAGIALV-EPFSIE 619
>gi|113955509|ref|YP_729826.1| long-chain acyl-CoA synthetase [Synechococcus sp. CC9311]
gi|113882860|gb|ABI47818.1| Long-chain acyl-CoA synthetase [Synechococcus sp. CC9311]
Length = 632
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/366 (40%), Positives = 217/366 (59%), Gaps = 24/366 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+RSL + E G LS+LP WH YER+ Y+ FS YT ++ LK DL R +P
Sbjct: 212 QMRSLSCVARPEPGAPVLSVLPIWHAYERSAEYYFFSCACSQSYTTIKQLKRDLPRVKPV 271
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M++VP ++E + +G + + T A+R+ + RA + S AY CL R Q+
Sbjct: 272 VMVTVPRLWEAVQAGFEDVLKTFPASRQRLLRAALSNSSAY----------CLARRQRCN 321
Query: 179 SYLVAL--IDWLWARIICAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHID 234
L+ L L A + A WP H LA KL++ K+ Q + G + ++GG ++ H+D
Sbjct: 322 LMLMPLGRRQRLMACLKSAGRWPAHALASKLIWPKLRLQLSGGQLRFPINGGAAIAPHVD 381
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE IVD E+ L
Sbjct: 382 SFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGQPMPQTEFMIVDPESRAPLSFRE 441
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+G+V VRG QVMQGY P AT + LD DGW +TGD+G + P G +VL G
Sbjct: 442 RGLVLVRGPQVMQGYLGKPEATAKVLDVDGWFDTGDLGMLLPD----------GSVVLTG 491
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
RAKDTIVLS+GEN+EP LE L + ++ Q++++GQD+++ A+IVP+++ + A+
Sbjct: 492 RAKDTIVLSSGENIEPGPLEAHLLMNPVVEQVLLVGQDKKQLAALIVPNQDGLRQFAENK 551
Query: 415 SIVHAD 420
I + D
Sbjct: 552 EIENID 557
>gi|116075040|ref|ZP_01472300.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9916]
gi|116067237|gb|EAU72991.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9916]
Length = 658
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 154/414 (37%), Positives = 236/414 (57%), Gaps = 32/414 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QIRSL + G LS+LP WH YER+ Y+ FS YT ++ LK DL R +P
Sbjct: 237 QIRSLACVAHPAPGSPVLSVLPIWHSYERSAEYYFFSCACSQSYTTIKQLKKDLPRVKPV 296
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M +VP ++E + +G + + T A+R+ + R+ + S AY CL R + +
Sbjct: 297 VMATVPRLWEAVQAGFEDVLKTFPASRQRLLRSALANSSAY----------CLARRRSRD 346
Query: 179 SYLVAL--IDWLWARIICAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHID 234
+ +L L A + + WP H +A KL++ K+ Q + G + ++GGG++ H+D
Sbjct: 347 LMVESLGKRQRLKAALEASRRWPAHAVASKLIWPKLRLQLSGGQLQFPINGGGAIAPHVD 406
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
FYEA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD ET L
Sbjct: 407 AFYEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGQPLPDTEFRIVDPETRAPLGFRE 466
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+G+V VRG QVM GY P AT + LD +GW +TGD+G + P G +VL G
Sbjct: 467 RGVVLVRGPQVMGGYLGKPEATAKVLDGEGWFDTGDLGLLLPD----------GSVVLTG 516
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAK 412
RAKDTIVLS+GEN+EP LEE + S L+ Q++++GQD+++ GA++VP E + A +
Sbjct: 517 RAKDTIVLSSGENIEPGPLEECLVASPLVEQVMLVGQDEKQLGALVVPRLEAIQAWAAEQ 576
Query: 413 RLSIVHADASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPFTVN 461
LS+ + + LL GE + ++ ++ + +V +PFT++
Sbjct: 577 GLSLADDLGGSPGEPALLKLLRGEFNRLLAGRHGARADERLAGVGLV-QPFTID 629
>gi|148238916|ref|YP_001224303.1| long-chain acyl-CoA synthetase [Synechococcus sp. WH 7803]
gi|147847455|emb|CAK23006.1| Long-chain acyl-CoA synthetase [Synechococcus sp. WH 7803]
Length = 647
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/349 (40%), Positives = 209/349 (59%), Gaps = 20/349 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+RSL + E GD LS+LP WH YER+ Y+ FS YT ++ LK DL R +P
Sbjct: 226 QMRSLACVARPEAGDPVLSVLPIWHAYERSAEYYFFSCACSQSYTTIKQLKRDLPRVRPV 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M++VP ++E + +G + T AR+ + +A + S A+ +R L +K+
Sbjct: 286 VMVTVPRLWEAVQAGFDDVLKTFPPARQRLLKAALANSAAFALARRRSRNLLLDPVRKRD 345
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHIDLF 236
L A + WP H LA +L++ K+ Q + G + ++GGG++ H+D F
Sbjct: 346 RVLAA--------AEASSRWPAHALASRLIWPKVRLQLSGGSLRFPINGGGAIAPHVDSF 397
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD ET L +G
Sbjct: 398 FEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGLPMPETEFRIVDGETRRPLGYRQRG 457
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+V+VRG QVM GY P AT + LD +GW +TGD+G + P G +VL GRA
Sbjct: 458 VVQVRGPQVMGGYLGKPEATAKVLDAEGWFDTGDLGLLLPD----------GSVVLTGRA 507
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
KDTIVLS+GEN+EP LEE + S LI Q++++GQD+R+ GA++VP E
Sbjct: 508 KDTIVLSSGENIEPGPLEETLVASPLIEQVMLVGQDERQLGALVVPRLE 556
>gi|159902941|ref|YP_001550285.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9211]
gi|159888117|gb|ABX08331.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9211]
Length = 664
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 223/386 (57%), Gaps = 25/386 (6%)
Query: 30 FFSRRDLPLFSFVLIDLNTWMP--IP-KMTNF--QIRSLYDIVPAENGDKFLSMLPPWHV 84
+ + D P+ + + T P +P NF QI SL I G LS+LP WH
Sbjct: 205 YGDKSDSPIATILYTSGTTGKPKGVPLTHANFLHQISSLACIANPSPGTPLLSVLPIWHS 264
Query: 85 YERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 144
YER+ Y+ FS G YT +++ K+DLQR +P M +VP ++E++ G I +
Sbjct: 265 YERSAEYYFFSCGCTQNYTTIKHFKEDLQRVKPVVMATVPRLWESVKIGFDDAIKKMPSF 324
Query: 145 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 204
R+ + +A + S AY R + V ++ ++A A+ WP+H ++
Sbjct: 325 RQNIIKAALNNSGAYKLALRKLRNLLIND--------VFFLERIFALGEVALRWPVHFMS 376
Query: 205 EKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 262
L++ K+ + + G ++GGG++ H+D F+E++GV++ VGYGLTE+SPV++ RRP
Sbjct: 377 SCLLWPKVLTQLCGGRLLFPINGGGAIAPHVDQFFESLGVELLVGYGLTETSPVLSCRRP 436
Query: 263 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 322
N+ GS G P+ T +IVD E V+ KG+V +G QVM+GY N AT + DE
Sbjct: 437 WRNIRGSSGPPLPETAFRIVDPEDGRVMNYREKGLVLAKGPQVMKGYLGNLKATAKVFDE 496
Query: 323 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 382
+GW NTGD+G + P G LVL GRAKDTIVLS+GEN+EP LEE + S L
Sbjct: 497 EGWFNTGDLGMLLPD----------GSLVLTGRAKDTIVLSSGENIEPGPLEEVLVASPL 546
Query: 383 IRQIVVIGQDQRRPGAIIVPDKEEVL 408
I+QI+++GQDQ++ GA++VP+ E+VL
Sbjct: 547 IKQIMLVGQDQKQLGALVVPNAEQVL 572
>gi|88809271|ref|ZP_01124780.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
7805]
gi|88787213|gb|EAR18371.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
7805]
Length = 647
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 237/411 (57%), Gaps = 26/411 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+RSL + E GD LS+LP WH YER+ Y+ FS YT ++ LK DL R +P
Sbjct: 226 QMRSLACVARPEAGDPVLSVLPIWHAYERSAEYYFFSCACSQSYTTIKQLKRDLPRVRPV 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M++VP ++E + +G + T AR+ + +A + S AY +R L +K+
Sbjct: 286 VMVTVPRLWEAVQAGFDDVLKTFPPARQRLLKAALANSAAYALARRRSRNLMLDPVRKR- 344
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLF 236
D + A + WP H LA +L++ +++ + G + ++GGG++ H+D F
Sbjct: 345 -------DRVIAAAEASSRWPAHALAARLIWPQVRRQLSGGSLRFPINGGGAIAPHVDSF 397
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +I+DAET L +G
Sbjct: 398 FEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGLPMPETEFRILDAETRLPLGYRQRG 457
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+V+VRG QVM+GY P AT + LD +GW +TGD+G + P G +VL GRA
Sbjct: 458 VVQVRGPQVMRGYLGKPEATAKVLDAEGWFDTGDLGLLLPD----------GSVVLTGRA 507
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM-AAKRLS 415
KDTIVLS+GEN+EP LEE + S LI Q++++GQD+R+ GA++VP E + A+ +++
Sbjct: 508 KDTIVLSSGENIEPGPLEETLVASPLIEQVMLVGQDERQLGALVVPRLEAMRAWASDQIA 567
Query: 416 IVHADASELSKEKTI-SLLYGELRKWTSKCSFQIGPIHVVD----EPFTVN 461
D + + LL GEL + S G +V EPF+++
Sbjct: 568 DPGEDLGGSPGDPGLRRLLRGELNRLLSDRVGARGDERLVGVALVEPFSID 618
>gi|78184237|ref|YP_376672.1| long-chain-fatty-acid--CoA ligase [Synechococcus sp. CC9902]
gi|78168531|gb|ABB25628.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
CC9902]
Length = 645
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 234/415 (56%), Gaps = 34/415 (8%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QIRSL + + GD LS+LP WH YER+ YF S YT ++ LK DL R QP
Sbjct: 224 QIRSLACVAYPKPGDPVLSVLPIWHAYERSASYFFLSCACTQTYTTIKQLKKDLPRVQPI 283
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M +VP ++E++ +G + + T +R+ + RA + S A R +
Sbjct: 284 AMATVPRLWESVQAGFEDVVKTFPPSRQRLLRAALSNSSAQRQALR-----------RAS 332
Query: 179 SYLVALIDW---LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHI 233
+ ++ + W A + + WPLH LA L++ K++ + + +SGGG++ HI
Sbjct: 333 NLMLEPVPWAGRFQAAGVALLRWPLHALASALLWPKVRRQLSGGQLAYPISGGGAIAPHI 392
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F+EA+G+++ VGYGLTE+SPVI+ RRP N+ GS G P+ TE +IVD E+ +L
Sbjct: 393 DAFFEAVGIELLVGYGLTETSPVISCRRPWHNIRGSSGLPLPGTEFRIVDPESGTLLGCR 452
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
+G V VRG QVM GY+ P AT + LD DGW +TGD+G + G + L
Sbjct: 453 QRGRVLVRGPQVMAGYWGKPDATAKVLDADGWFDTGDLGMLL----------ADGSVALT 502
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GRAKDTIVLS+GEN+EP LEE + S LI Q++++GQD+R+ A+IVP + +++ A +
Sbjct: 503 GRAKDTIVLSSGENIEPGPLEEVLVASPLIEQVMLVGQDERQLAALIVPRADVIVVWAGQ 562
Query: 414 --LSIVHADASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPFTVN 461
LS+ + + + + LL E + ++ ++ + +VD PFT++
Sbjct: 563 QGLSLANDLGGKPGDQALLRLLMQECNRLLKQRVGARGDERLAGVVLVD-PFTID 616
>gi|33865203|ref|NP_896762.1| long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH 8102]
gi|33638887|emb|CAE07184.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
8102]
Length = 637
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/351 (40%), Positives = 208/351 (59%), Gaps = 20/351 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q++SL + + G LS+LP WH YER+ Y+ S YT ++ LK DL R +P
Sbjct: 216 QMQSLACVAHPQPGAPVLSVLPIWHAYERSASYYFLSCACTQTYTNIKQLKKDLPRVRPI 275
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M +VP ++E++ +G + + T +R+ + RA + S A+ R L QP
Sbjct: 276 AMATVPRLWESVQAGFEDVVKTFPPSRQRLLRAALANSAAHRKAVRTARNLLL-----QP 330
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLF 236
VAL + A + A+ WPLH LA L++ K++ + + +SGGG++ HID F
Sbjct: 331 ---VALPGRMTAAAVAALRWPLHALASALIWPKLRLQLSGGRLAYPISGGGAIAPHIDAF 387
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD E+ L +G
Sbjct: 388 FEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGLPMPDTEFRIVDQESGASLGFRERG 447
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
V VRG QVM GY P A+ + L DGW +TGD+G + P G + L GRA
Sbjct: 448 RVLVRGPQVMGGYLGKPEASAKVLSADGWFDTGDLGMLLPD----------GSVALTGRA 497
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
KDTIVLS+GEN+EP LEEA + S LI Q++++GQD+R+ GA++VP E +
Sbjct: 498 KDTIVLSSGENIEPGPLEEALVASPLIEQVMLVGQDERQLGALLVPRVEPI 548
>gi|452822005|gb|EME29029.1| long-chain acyl-CoA synthetase [Galdieria sulphuraria]
Length = 762
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 220/376 (58%), Gaps = 48/376 (12%)
Query: 38 LFSFVLIDLNTWMPIPKMTNFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRG 97
L+ ID+ P+P G+ F+S+LP WHV+ER YF F+RG
Sbjct: 312 LYQIASIDIGKCCPVP------------------GNVFVSILPCWHVFERTAEYFFFARG 353
Query: 98 IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 157
+ ++Y+ VRNL++DLQ ++P ++++VP V+E+LY+ I I S RR + R IS
Sbjct: 354 VCVVYSNVRNLRNDLQLHKPQFLVAVPRVFESLYNNIMSNISKQSLMRRYLIRMFTFISL 413
Query: 158 AY-TAFKRIYEGFCLTRNQKQPSYLVALID---W--LWARIICAILWPLHLLAEKLVYKK 211
+Y AF+ ++ S + ID W L A + L+ H LA +V+ K
Sbjct: 414 SYHRAFRTLF------------SLDIFRIDSRFWKKLKAFFVLIALFTFHKLANWIVWSK 461
Query: 212 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC-NVLGS 269
I+S +G + G+ GGGSLP +++ FY + GV + VGYGLTE+SPV++ RRP N+LGS
Sbjct: 462 IRSVLGGRVQCGICGGGSLPFYLEEFYASTGVCLLVGYGLTETSPVVSHRRPGLENMLGS 521
Query: 270 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 329
G + T++K+V ET E L G G++ VRG V++GY++ P + L EDG+ N+G
Sbjct: 522 SGRCLPGTQVKVVHPETKEELKHGDIGLLLVRGPGVVRGYYREPERSDVFL-EDGFFNSG 580
Query: 330 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 389
D+ WI P++ G +V+ GR KD IVL+ GEN+EP +E+A L S L Q++++
Sbjct: 581 DLAWIVPNN---------GHIVISGRYKDVIVLNNGENIEPQPIEDAILESPLFDQVILV 631
Query: 390 GQDQRRPGAIIVPDKE 405
GQD+R GA++VP E
Sbjct: 632 GQDERHLGALLVPSLE 647
>gi|260435335|ref|ZP_05789305.1| long-chain acyl-CoA synthetase [Synechococcus sp. WH 8109]
gi|260413209|gb|EEX06505.1| long-chain acyl-CoA synthetase [Synechococcus sp. WH 8109]
Length = 637
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 208/363 (57%), Gaps = 20/363 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ SL + E G LS+LP WH YER+ YF S G YT ++ LK DL R +P
Sbjct: 216 QMSSLACVAYPEPGAPVLSVLPIWHAYERSASYFFLSCGCTQTYTTIKQLKKDLPRVRPI 275
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M +VP ++E + +G + + T +R+ + RA + S A R L +P
Sbjct: 276 AMATVPRLWEAVQAGFEDVLKTFPPSRQRLLRAALANSAAQRKALRTARNLLL-----EP 330
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLF 236
V+ D L A A+ WPLH LA L++ K++ + + +SGGG++ HID F
Sbjct: 331 ---VSASDRLRACGSAALRWPLHALASTLIWPKLRRQLSGGQLAYPISGGGAIAPHIDAF 387
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD + + L +G
Sbjct: 388 FEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGLPMPQTEFRIVDPDNGQPLGFRQRG 447
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
V VRG QVM GY P A+ + LD GW +TGD+G + P G + L GRA
Sbjct: 448 RVMVRGPQVMAGYLGKPEASAKVLDAAGWFDTGDLGMLMPD----------GSVALTGRA 497
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
KDTIVLS+GEN+EP LEEA + S LI Q++++GQD+R+ G +IVP E ++ A +
Sbjct: 498 KDTIVLSSGENIEPGPLEEALVASPLIEQVMLVGQDERQLGGLIVPRAEVIVAWAAEAGV 557
Query: 417 VHA 419
A
Sbjct: 558 SAA 560
>gi|378974784|ref|YP_005223392.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum DAL-1]
gi|384421695|ref|YP_005631054.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Chicago]
gi|291059561|gb|ADD72296.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Chicago]
gi|374680182|gb|AEZ60472.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum DAL-1]
Length = 668
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 204/368 (55%), Gaps = 33/368 (8%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYET 129
GD LS+LP WHV+ER Y + S + Y+ + DL + PH++ SVP ++E
Sbjct: 259 GDIALSVLPVWHVFERISEYVVLSHAGGVAYSKPVGSVMLADLAKLNPHFLPSVPRIWEA 318
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF--CLTRNQKQPSYLVALIDW 187
++ GI K + + + AY F R G TR + + L A + W
Sbjct: 319 IHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYFYRSVFGLRTHTTRRAQFCAPLFACVPW 378
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
L +L PLH L LV++K++ G S K +SGGG+LP ++D F AIGV+V
Sbjct: 379 L-------LLVPLHFLGNVLVFRKVRKKFGTSFKTAISGGGALPPNVDEFLYAIGVRVLE 431
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE++PVIA R V GSVG P + E+KIVD +T LP G KGIV VRG +M
Sbjct: 432 GYGLTETAPVIAMRSERRPVFGSVGTPCAYNEVKIVD-DTGAQLPVGYKGIVLVRGKNIM 490
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC-GGVLVLEGRAKDTIVLSTG 365
QGY+KNP T Q LD DGW NTGDIG+ RC GG +VL GR KDT+VL G
Sbjct: 491 QGYYKNPELTAQVLDADGWFNTGDIGY-----------RCVGGQIVLRGRKKDTVVLRGG 539
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 425
ENVEP+ LE + S I + VV+GQD+R A+IVPD+ E+ + A+A EL
Sbjct: 540 ENVEPVPLEMSMQESRFIARAVVVGQDERYLAALIVPDEAELRL--------WAEAQELR 591
Query: 426 KEKTISLL 433
E LL
Sbjct: 592 TECMEELL 599
>gi|378972655|ref|YP_005221259.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|378973722|ref|YP_005222328.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|378981631|ref|YP_005229936.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374676978|gb|AEZ57271.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|374678048|gb|AEZ58340.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374679117|gb|AEZ59408.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. Gauthier]
Length = 668
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 204/368 (55%), Gaps = 33/368 (8%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYET 129
GD LS+LP WHV+ER Y + S + Y+ + DL + PH++ SVP ++E
Sbjct: 259 GDIALSVLPVWHVFERISEYVVLSHAGGVAYSKPVGSVMLADLAKLNPHFLPSVPRIWEA 318
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF--CLTRNQKQPSYLVALIDW 187
++ GI K + + + AY F R G TR + + L A + W
Sbjct: 319 IHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYFYRSVFGLRTHTTRRAQFCAPLFACVPW 378
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
L +L PLH L LV++K++ G S K +SGGG+LP ++D F AIGV+V
Sbjct: 379 L-------LLVPLHFLGNVLVFRKVRKKFGTSFKTAISGGGALPPNVDEFLYAIGVRVLE 431
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE++PVIA R V GSVG P + E+KIVD +T LP G KGIV VRG +M
Sbjct: 432 GYGLTETAPVIAMRSERRPVFGSVGTPCAYNEVKIVD-DTGAQLPVGYKGIVLVRGKNIM 490
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC-GGVLVLEGRAKDTIVLSTG 365
QGY+KNP T Q LD DGW NTGDIG+ RC GG +VL GR KDT+VL G
Sbjct: 491 QGYYKNPELTAQVLDADGWFNTGDIGY-----------RCVGGQIVLRGRKKDTVVLRGG 539
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 425
ENVEP+ LE + S I + VV+GQD+R A+IVPD+ E+ + A+A EL
Sbjct: 540 ENVEPVPLEMSMQESRFIARAVVVGQDERYLAALIVPDEAELRL--------WAEAQELR 591
Query: 426 KEKTISLL 433
E LL
Sbjct: 592 TECMEELL 599
>gi|15639139|ref|NP_218585.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025379|ref|YP_001933151.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum SS14]
gi|408502048|ref|YP_006869492.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Mexico A]
gi|3322408|gb|AAC65132.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189017954|gb|ACD70572.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum SS14]
gi|408475411|gb|AFU66176.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Mexico A]
Length = 656
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 204/368 (55%), Gaps = 33/368 (8%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYET 129
GD LS+LP WHV+ER Y + S + Y+ + DL + PH++ SVP ++E
Sbjct: 247 GDIALSVLPVWHVFERISEYVVLSHAGGVAYSKPVGSVMLADLAKLNPHFLPSVPRIWEA 306
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF--CLTRNQKQPSYLVALIDW 187
++ GI K + + + AY F R G TR + + L A + W
Sbjct: 307 IHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYFYRSVFGLRTHTTRRAQFCAPLFACVPW 366
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
L +L PLH L LV++K++ G S K +SGGG+LP ++D F AIGV+V
Sbjct: 367 L-------LLVPLHFLGNVLVFRKVRKKFGTSFKTAISGGGALPPNVDEFLYAIGVRVLE 419
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE++PVIA R V GSVG P + E+KIVD +T LP G KGIV VRG +M
Sbjct: 420 GYGLTETAPVIAMRSERRPVFGSVGTPCAYNEVKIVD-DTGAQLPVGYKGIVLVRGKNIM 478
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC-GGVLVLEGRAKDTIVLSTG 365
QGY+KNP T Q LD DGW NTGDIG+ RC GG +VL GR KDT+VL G
Sbjct: 479 QGYYKNPELTAQVLDADGWFNTGDIGY-----------RCVGGQIVLRGRKKDTVVLRGG 527
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 425
ENVEP+ LE + S I + VV+GQD+R A+IVPD+ E+ + A+A EL
Sbjct: 528 ENVEPVPLEMSMQESRFIARAVVVGQDERYLAALIVPDEAELRL--------WAEAQELR 579
Query: 426 KEKTISLL 433
E LL
Sbjct: 580 TECMEELL 587
>gi|338706124|ref|YP_004672892.1| long-chain-fatty-acid--CoA ligase [Treponema paraluiscuniculi
Cuniculi A]
gi|335344185|gb|AEH40101.1| long-chain-fatty-acid--CoA ligase [Treponema paraluiscuniculi
Cuniculi A]
Length = 668
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 204/368 (55%), Gaps = 33/368 (8%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYET 129
GD LS+LP WHV+ER Y + S + Y+ + DL + PH++ SVP ++E
Sbjct: 259 GDIALSVLPVWHVFERISEYVVLSHAGGVAYSKPVGSVMLADLAKLNPHFLPSVPRIWEA 318
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF--CLTRNQKQPSYLVALIDW 187
++ GI K + + + AY F R G TR + + L A + W
Sbjct: 319 IHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYFYRSVFGLRTHTTRRAQFCAPLFACVPW 378
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
L +L PLH L LV++K++ G S K +SGGG+LP ++D F AIGV+V
Sbjct: 379 L-------LLVPLHFLGNVLVFRKVRKEFGTSFKTAISGGGALPPNVDEFLYAIGVRVLE 431
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE++PVIA R V GSVG P + E+KIVD +T LP G KGIV VRG +M
Sbjct: 432 GYGLTETAPVIAMRSERRPVFGSVGTPCAYNEVKIVD-DTGAQLPVGYKGIVLVRGKNIM 490
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC-GGVLVLEGRAKDTIVLSTG 365
QGY+KNP T Q LD DGW NTGDIG+ RC GG +VL GR KDT+VL G
Sbjct: 491 QGYYKNPELTAQVLDADGWFNTGDIGY-----------RCVGGQIVLRGRKKDTVVLRGG 539
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 425
ENVEP+ LE + S I + VV+GQD+R A+IVPD+ E+ + A+A EL
Sbjct: 540 ENVEPVPLEMSMQESRFIARAVVVGQDERYLAALIVPDEAELRL--------WAEAQELR 591
Query: 426 KEKTISLL 433
E LL
Sbjct: 592 TECMEELL 599
>gi|78213528|ref|YP_382307.1| long-chain-fatty-acid--CoA ligase [Synechococcus sp. CC9605]
gi|78197987|gb|ABB35752.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
CC9605]
Length = 637
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/412 (36%), Positives = 228/412 (55%), Gaps = 28/412 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+ SL + E G LS+LP WH YER+ YF S YT ++ LK DL R +P
Sbjct: 216 QMSSLACVAYPEPGAPVLSVLPIWHAYERSASYFFLSCACTQTYTTIKQLKKDLPRVRPI 275
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M +VP ++E + +G + + T +R+ + RA + S A R L +P
Sbjct: 276 AMATVPRLWEAVQAGFEDVLKTFPPSRQRLLRAALANSAAQRKAVRTARNLLL-----EP 330
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLF 236
V+ L A A+ WPLH LA L++ K++ + + +SGGG++ HID F
Sbjct: 331 ---VSASGRLRACGSAALRWPLHALASTLIWPKLRRQLSGGQLAYPISGGGAIAPHIDAF 387
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD + + L +G
Sbjct: 388 FEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGLPMPQTEFRIVDPDNGQPLGFRQRG 447
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
V VRG QVM GY P A+ + LD GW +TGD+G + P G + L GRA
Sbjct: 448 RVMVRGPQVMVGYLGKPEASAKVLDTAGWFDTGDLGMLLPD----------GSVALTGRA 497
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR--L 414
KDTIVLS+GEN+EP LEEA + S LI Q++++GQD+R+ GA+IVP E ++ A +
Sbjct: 498 KDTIVLSSGENIEPGPLEEALVASPLIEQVMLVGQDERQLGALIVPRAEAIVAWAAEACV 557
Query: 415 SIVHADASELSKEKTISLLYGEL-----RKWTSKCSFQIGPIHVVDEPFTVN 461
++ + + LL E ++W S+ ++ + +VD PF++
Sbjct: 558 NVAQDLGGQPGDPALLRLLMRECNRLLKQRWGSRGDERLAGVVLVD-PFSIE 608
>gi|124023832|ref|YP_001018139.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9303]
gi|123964118|gb|ABM78874.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9303]
Length = 621
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 226/392 (57%), Gaps = 24/392 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R L + G+ LS+LP WH YER+ Y+ FS YT ++ LK DL R +P
Sbjct: 199 QMRCLACVAFPSPGEPVLSVLPIWHAYERSAEYYFFSCACTQSYTTIKQLKRDLPRVRPI 258
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK-Q 177
M +VP ++E + +G + + R+ L+R++ A + +R + + +RN +
Sbjct: 259 VMATVPRLWEAIQAGFDEAVKGMPTGRQ----RLLRMALANSGSQR--KAWRRSRNLLLE 312
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHIDL 235
P V L A + + WPLH LA L++ K+ Q G + ++GGG++ H+D
Sbjct: 313 P---VPLTTRTLALLEATLRWPLHGLAGALLWPKVLNQLCGGRLRFPINGGGAIAPHVDA 369
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD E+ L +
Sbjct: 370 FFEAVGLELLVGYGLTETSPVVSCRRPWRNIRGSSGPPLPDTEFRIVDPESGAALMFRQR 429
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G V VRG QVM GY + P AT + LD GW +TGD+G + P G LVL GR
Sbjct: 430 GRVLVRGPQVMAGYLRKPEATAKVLDGQGWFDTGDLGMLLPD----------GSLVLTGR 479
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR-- 413
AKDTIVLS+GEN+EP LE A + S L+ Q++++GQD+R+ A++VP +EE+L A+
Sbjct: 480 AKDTIVLSSGENIEPGPLEAALVASPLLEQVMLVGQDERQLAALVVPREEEMLAWAEDQG 539
Query: 414 LSIVHADASELSKEKTISLLYGELRKWTSKCS 445
LS+ + E LL GEL + ++ S
Sbjct: 540 LSMQTGLSGSPGDEALRRLLRGELNRLLAQRS 571
>gi|116071118|ref|ZP_01468387.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
BL107]
gi|116066523|gb|EAU72280.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
BL107]
Length = 653
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 151/412 (36%), Positives = 231/412 (56%), Gaps = 28/412 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QIRSL + + GD LS+LP WH YER+ Y+ S YT ++ LK DL R QP
Sbjct: 232 QIRSLACVAYPQPGDPVLSVLPIWHAYERSASYYFLSCACTQTYTTIKQLKKDLPRVQPI 291
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M +VP ++E++ +G + + T +R+ + RA + S A R L +P
Sbjct: 292 AMATVPRLWESVQAGFEDVVKTFPPSRQRLLRAALSNSSAQRQALRRANNLML-----EP 346
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLF 236
V A + + WPLH LA L++ K++ + + +SGGG++ HID F
Sbjct: 347 ---VCWAGRFQAAGVACLRWPLHALASALLWPKVRRQLSGGQLAYPISGGGAIAPHIDAF 403
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EA+G+++ VGYGLTE+SPVI+ RRP N+ GS G P+ TE ++VD E+ L +G
Sbjct: 404 FEAVGIELLVGYGLTETSPVISCRRPWHNIRGSSGLPLPGTEFRVVDPESGMSLGCRERG 463
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
V VRG QVM GY+ P AT + LD +GW +TGD+G + G + L GRA
Sbjct: 464 RVLVRGPQVMGGYWGKPDATAKVLDAEGWFDTGDLGMLL----------ADGSVALTGRA 513
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR--L 414
KDTIVLS+GEN+EP LEE + S LI Q++++GQD+R+ A+IVP + ++ A + L
Sbjct: 514 KDTIVLSSGENIEPGPLEEVLVASPLIEQVMLVGQDERQLAALIVPRADVIVDWAGQQGL 573
Query: 415 SIVHADASELSKEKTISLLYGE-----LRKWTSKCSFQIGPIHVVDEPFTVN 461
S+ + + + + LL E ++ ++ ++ + +VD PFT++
Sbjct: 574 SLANDLGGKPGDQALLRLLMKEGNRLLKQRVGARGDERLAGVALVD-PFTID 624
>gi|33239851|ref|NP_874793.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237377|gb|AAP99445.1| Long-chain acyl-CoA synthetase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 675
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 207/360 (57%), Gaps = 20/360 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+RSL I G LS+LP WH YER+ Y+ FS YT +++ K DLQ +P
Sbjct: 254 QMRSLACIASPPPGTPLLSVLPIWHSYERSAEYYFFSCACSQHYTTIKHFKQDLQTVRPV 313
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M +VP ++E + +G + + +R++V +A + S + A R L K
Sbjct: 314 VMATVPRLWEAVKTGFDEALKKMPRSRQMVLKAALNNSRLFKAALRKSRNLLLLEINKT- 372
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHIDLF 236
+ +A + WP+H LA KL++ K+ Q + G + ++GGG++ H+D F
Sbjct: 373 NRAIAFSE-------VVFRWPIHALASKLLWPKVLQQLSGGRLRFPINGGGAIAPHVDTF 425
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EA+GV++ VGYGLTE+SPV++ RR N+ GS G P+ TE +IVD L +G
Sbjct: 426 FEALGVELLVGYGLTETSPVLSCRRTWRNIRGSSGLPLPETEFRIVDPLNGGPLKFSQQG 485
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
V VRG QVM GY + P T + LD+ GW +TGD+G + G +VL GRA
Sbjct: 486 RVLVRGPQVMNGYLRKPEETSKVLDQKGWFDTGDLGMLL----------ADGSIVLTGRA 535
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
KDTIVLS GENVEP LEE L S LI QI++IGQD+R+ GA+IVPD +++L A + ++
Sbjct: 536 KDTIVLSNGENVEPGPLEEFLLGSPLIEQIIMIGQDERQLGALIVPDIDQILKWAHQRNL 595
>gi|392401663|ref|YP_006438275.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390609617|gb|AFM10769.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 625
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/361 (38%), Positives = 219/361 (60%), Gaps = 21/361 (5%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D LS+LP WH++ERA Y ++GI L YT VR+++DD + +P +M S P ++E+LY
Sbjct: 220 DSMLSLLPVWHIFERAVDYGAIAKGIPLYYTNVRDVRDDFAKVKPTFMPSAPRLWESLYQ 279
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
GI ++I S AR+V+ RIS Y K+ + +QP + + +
Sbjct: 280 GIMQRIEKSEPARKVMFETAYRISKEY---KKAVDYLAGNELMQQPESDADRLSRTASSL 336
Query: 193 ICAI-LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
A L+ LA+++V+ KI+ A+G + +SGGG+LP H+D F+ IG+ V GYG+
Sbjct: 337 FTAASLYIPARLADRVVFSKIREAMGGRFRGSISGGGALPAHVDEFFNVIGIPVYEGYGM 396
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE +P+I+ R + GSVG N TE+ I++ + E + G KG++ VRG QVM+GY+
Sbjct: 397 TECAPIISVRTEGKIIQGSVGFVPNGTEVAILN-DKGERVRTGEKGVIHVRGPQVMKGYY 455
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
KNP AT++ +++DGWLNTGDIG+ + +++ L + GRAK+TIVL GENVEP
Sbjct: 456 KNPEATEKTINKDGWLNTGDIGFFSFNNT----------LSIRGRAKETIVLLGGENVEP 505
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKT 429
+ +E L + I QI+V+GQD++ A++ P+ E+V K ++ + AD S+L+ K
Sbjct: 506 VPIENKLLEDAQINQIIVVGQDKKTLTALVWPNLEKV----KEVAGISADPKSDLNANKE 561
Query: 430 I 430
+
Sbjct: 562 L 562
>gi|298711624|emb|CBJ32681.1| long chain acyl-CoA synthetase [Ectocarpus siliculosus]
Length = 725
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 199/331 (60%), Gaps = 17/331 (5%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLY 131
GD F+S+LP WH++ER YF +RG+ + Y+ VRN K DL++++PH++I VP + ET++
Sbjct: 291 GDVFVSILPCWHIFERTAEYFTLTRGVTMGYSNVRNFKSDLKKFKPHFLIVVPRLLETIW 350
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
G+Q Q+ S + A AL R+S R + G + R+ K AL +
Sbjct: 351 KGVQTQLEAKSKGAQKAAGALTRVSSLRMKAARRFSGTVI-RDSKPKGPEKAL-----SA 404
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGG-GSLPMHIDLFYEAIGVKVQVGYGL 250
++ + PL L AEKLV+ KI+ +G V G SLP ++ F+E GV+V VGYGL
Sbjct: 405 VLMGVTLPLKLAAEKLVWGKIRDGVGGRVKVVVSGGSSLPSFLEDFFEMAGVRVLVGYGL 464
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE+SPVIA R T N G+ G P+ +E+KI D ET + + G G + +RG QVM GY
Sbjct: 465 TETSPVIANRVATENTKGTTGKPVPGSEVKIADQETGQQVAVGQTGKILIRGPQVMSGYQ 524
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
NP AT +D+DG+ +TGD+G P G L++ GRAKDTIVLS GENVEP
Sbjct: 525 NNPEATAAVIDKDGYFDTGDLGRFNP---------ITGDLIVTGRAKDTIVLSNGENVEP 575
Query: 371 LELEEA-ALRSSLIRQIVVIGQDQRRPGAII 400
LE+A + SLI Q+++ GQD+R GAI+
Sbjct: 576 QPLEDAISGACSLIDQVMLFGQDERFLGAIV 606
>gi|124025167|ref|YP_001014283.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str.
NATL1A]
gi|123960235|gb|ABM75018.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. NATL1A]
Length = 657
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 207/352 (58%), Gaps = 22/352 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QIRSL + G LS+LP WH YER+ Y+ FS G YT++R+LK+DL R +P
Sbjct: 236 QIRSLACVANPSPGAPVLSVLPIWHSYERSAEYYFFSCGCTQTYTSIRHLKEDLPRVKPI 295
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT-AFKRIYEGFCLTRNQKQ 177
M +VP ++E++ G + + R+ + ++ I S AY A +++Y F +
Sbjct: 296 VMATVPRLWESIKLGFEDAVDKMPRLRKTLIKSAISNSKAYKLARRKLY--FLTIESVSS 353
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDL 235
L++ I+ L + +P+H ++ ++ KI + I G + +SGGG++ HID
Sbjct: 354 FEQLISCIEIL-------LRYPIHRISSIYLWPKILTKICGGKLRFPISGGGAIAPHIDS 406
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+EA+GV++ VGYGLTE+SPV+ RRP N+ G G P+ TEIKIVD ET ++ K
Sbjct: 407 FFEALGVELLVGYGLTETSPVLTCRRPWRNIRGGAGQPLPETEIKIVDPETFQIKKLRQK 466
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G+V RG Q+M GY S +K+ LD GW NTGD+G + G L+L GR
Sbjct: 467 GLVLARGPQIMSGYLGKRSESKKVLDATGWFNTGDLGMLL----------SDGSLILTGR 516
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
AKDTIVLS+GEN+EP LEE + S LI Q +++GQDQ+ A+IVP + V
Sbjct: 517 AKDTIVLSSGENIEPGPLEECLIASPLIEQALLLGQDQKYLAALIVPRIDHV 568
>gi|320538352|ref|ZP_08038230.1| AMP-binding enzyme [Treponema phagedenis F0421]
gi|320144796|gb|EFW36534.1| AMP-binding enzyme [Treponema phagedenis F0421]
Length = 643
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 213/366 (58%), Gaps = 28/366 (7%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYET 129
G++ LS+LP WHV+ER C Y I + Y+ L D + PH + SVP ++E
Sbjct: 234 GERALSVLPVWHVFERLCEYAIIHAAAGIAYSKPIGSILLADFAKINPHLLPSVPRIWEA 293
Query: 130 LYSGIQKQIFTSSAARRVVARALIRI-SFAYTAFKRIYEGFCLT-RNQKQPSYLVALIDW 187
++ G+ KQ+ + + ++ + + +R+++ T + +K + +A I W
Sbjct: 294 VHDGVFKQLRKKGGISYALFKFFLKAGNLRFHYHRRLFKNVAYTSQAEKTVAPFLAFIPW 353
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
L +L P+HLL + LV+ KI+ +G + +AGVSGGG+LP +ID F+ GV V
Sbjct: 354 L-------LLTPIHLLGDALVFSKIRLKLGKNFRAGVSGGGALPGNIDEFFWTAGVTVVE 406
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE++PV+A R + + G++G P N+ ++K+VD +T + LP G +G+V VRG VM
Sbjct: 407 GYGLTETAPVVAVRSVSHPIFGTIGTPCNYNQVKVVD-DTGKTLPMGEQGVVYVRGDNVM 465
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GYFK P T+ +D+DGW NTGDIG+I GG +VL GR KDTIVL GE
Sbjct: 466 KGYFKRPELTESVIDKDGWFNTGDIGYIC----------LGGEIVLRGRLKDTIVLRGGE 515
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
N+EP+ +E S I VV+GQDQR GA+I+PD+ E+ AK I +E S
Sbjct: 516 NIEPVPIEMRLQESQYISLAVVVGQDQRYLGALILPDEAELQAWAKSQHI-----AEESM 570
Query: 427 EKTISL 432
EK I L
Sbjct: 571 EKLIEL 576
>gi|72383573|ref|YP_292928.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str.
NATL2A]
gi|72003423|gb|AAZ59225.1| long-chain acyl-CoA synthetase [Prochlorococcus marinus str.
NATL2A]
Length = 657
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 206/352 (58%), Gaps = 22/352 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QIRSL + G LS+LP WH YER+ Y+ FS G YT++R+LK+DL R +P
Sbjct: 236 QIRSLACVANPSPGAPVLSVLPIWHSYERSAEYYFFSCGCTQTYTSIRHLKEDLPRVKPI 295
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT-AFKRIYEGFCLTRNQKQ 177
M +VP ++E++ G + + R+ + ++ I S AY A +++Y F +
Sbjct: 296 VMATVPRLWESIKLGFEDAVDKMPRLRKTLIKSAISNSKAYKLARRKLY--FLTIESVSS 353
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDL 235
+ + I+ L + +P+H ++ ++ KI + I G + +SGGG++ HID
Sbjct: 354 FEQISSFIEIL-------LRYPMHRISSIYLWPKILTKICGGRLRFPISGGGAIAPHIDS 406
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+EA+GV++ VGYGLTE+SPV+ RRP N+ G G P+ TEIKIVD ET ++ K
Sbjct: 407 FFEALGVELLVGYGLTETSPVLTCRRPWRNIRGGAGQPLPETEIKIVDPETFQIKKLRQK 466
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G+V RG Q+M GY S +K+ LD GW NTGD+G + G L+L GR
Sbjct: 467 GLVLARGPQIMSGYLGKRSESKKVLDATGWFNTGDLGMLL----------SDGSLILTGR 516
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
AKDTIVLS+GEN+EP LEE + SSLI Q ++GQDQ+ A+IVP + V
Sbjct: 517 AKDTIVLSSGENIEPGPLEECLIASSLIEQAFLLGQDQKYLAALIVPRIDHV 568
>gi|123965699|ref|YP_001010780.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9515]
gi|123200065|gb|ABM71673.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9515]
Length = 641
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/385 (38%), Positives = 211/385 (54%), Gaps = 39/385 (10%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L I E G LS+LP WH YER+ YF FS G YT + LKDD+++ +P
Sbjct: 226 QIINLAYIADPETGTSVLSVLPIWHSYERSAEYFFFSCGCTQFYTNPKFLKDDIKKVKPV 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQKQ 177
M +VP ++E ++ G + + ++ + LI+ S + FKR + NQ
Sbjct: 286 VMATVPRLWEAIHDGFFLALKKMNPKKQKTIKFLIKNS---SIFKRNLRKIRNIEINQVS 342
Query: 178 PSYLVALI-----DWLWARIICAILWP---LHLLAEKLVYKKIQSAIGISKAGVSGGGSL 229
+ LI + +I LWP L EKL K ++GGG+L
Sbjct: 343 SLAKICLIISVLGRFFLHKISSTFLWPSILKQLCGEKL------------KFPINGGGAL 390
Query: 230 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 289
P H+DLF+E++G+ V VGYGLTE+SPV+ RR NV GS G P+ TEIKIV+ E +++
Sbjct: 391 PEHVDLFFESLGIDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLAFTEIKIVNEEKDKI 450
Query: 290 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 349
L G + V+G QVM+GY N SATK L +DGW +TGD+G++ P+ G
Sbjct: 451 LEFREVGKILVKGPQVMKGYLNNDSATKDVLSKDGWFDTGDLGFLIPN----------GS 500
Query: 350 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 409
LV+ GRAKDTIVLS+GEN+EP LE L S I Q+ ++GQD++ A++VP+ E V
Sbjct: 501 LVITGRAKDTIVLSSGENIEPNPLETQILSSEFINQVQLVGQDKKFLTALVVPNIELV-- 558
Query: 410 AAKRLSIVHADASELSKEKTISLLY 434
+ D S L+ K I L +
Sbjct: 559 ---KNKFFANDLSTLNSNKNIGLFF 580
>gi|33862488|ref|NP_894048.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9313]
gi|33640601|emb|CAE20390.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9313]
Length = 664
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 220/391 (56%), Gaps = 22/391 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R L + G LS+LP WH YER+ Y+ FS YT ++ LK DL R +P
Sbjct: 242 QMRCLACVAFPSPGAPVLSVLPIWHAYERSAEYYFFSCACTQSYTTIKQLKRDLPRVRPI 301
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M +VP ++E + +G + + R+ L+R++ A + +R R++
Sbjct: 302 VMATVPRLWEAIQAGFDEAVKGMPTGRQ----RLLRMALANSGSQRK----AWRRSRNLL 353
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHIDLF 236
+ L A + + WPLH LA L++ K+ Q G + ++GGG++ H+D F
Sbjct: 354 LEPLPLTTRTLALLEATLRWPLHGLAGALLWPKVLNQLCGGRLRFPINGGGAIAPHVDAF 413
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD E+ L +G
Sbjct: 414 FEAVGLELLVGYGLTETSPVVSCRRPWRNIRGSSGPPLPETEFRIVDPESGVDLMFRQRG 473
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
V VRG QVM GY + P AT + LD GW +TGD+G + P G LVL GRA
Sbjct: 474 RVLVRGPQVMAGYLRKPEATAKVLDGQGWFDTGDLGMLLPD----------GSLVLTGRA 523
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
KDTIVLS+GEN+EP LE A + S L+ Q++++GQD+R+ A++VP +EE+L A+ +
Sbjct: 524 KDTIVLSSGENIEPGPLEAALVASPLLEQVMLVGQDERQLAALVVPREEEMLAWAEDQGL 583
Query: 417 VHAD--ASELSKEKTISLLYGELRKWTSKCS 445
+ + E LL GEL + ++ S
Sbjct: 584 LMQTGLSGSPGDEALRRLLRGELNRLLAQRS 614
>gi|387192078|gb|AFJ68636.1| long-chain acyl-CoA synthetase [Nannochloropsis gaditana CCMP526]
Length = 671
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 236/426 (55%), Gaps = 48/426 (11%)
Query: 68 PAEN---GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVP 124
PA N GD +S+LP WH++ER Y++FS+GI ++Y+ V+N K DL ++QP ++++VP
Sbjct: 232 PAYNPVLGDVLVSVLPCWHIFERTAEYWMFSKGIHVVYSNVKNFKADLAKHQPQFIVAVP 291
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+ ET+Y G+ ++ T A++ + R+ A+ R+ G L P
Sbjct: 292 RLLETIYRGVLQKFATEKGAKKKIIEFFTRVGSAWVKAWRVARGLVLRSRAPNP------ 345
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
I+ L A ++ +L PL + +KLV+ K+++ +G K V+GG S+P+ ++ F+E +
Sbjct: 346 IERLLALVLALVLSPLAAVGDKLVWSKVRAGLGGRIKVLVAGGSSMPLVLEDFFELLRTP 405
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
V VGYG+TE+SPVI R N+ GSVG TE+KIVD E+ LP G G+V +RG
Sbjct: 406 VIVGYGMTETSPVITNRVAEKNLAGSVGRTARDTEVKIVDPESGARLPEGQPGLVLMRGP 465
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
Q+M GY N A+K LD++G+L+TGD+G I P L++ GRAKDTIVLS
Sbjct: 466 QMMAGYKSNAEASKAVLDQEGFLDTGDLGRIHPLTKH---------LIITGRAKDTIVLS 516
Query: 364 TGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKE----------------- 405
GENVEP +E+ S+L+ Q++ +GQD++ G ++VP+
Sbjct: 517 NGENVEPQPIEDVVCANSALVDQVMCVGQDEKVLGMLVVPNVRALARAGLVDRGLAERVA 576
Query: 406 EVL--------MAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC---SFQIGPIHVV 454
E+L +A R + +AS K++ L ++ + K + ++G + VV
Sbjct: 577 ELLGGQVLTNGIAGSRAELEEVEASLREKKEVKKALLADIARAMGKSFRETERVGAVEVV 636
Query: 455 DEPFTV 460
EPF +
Sbjct: 637 LEPFNM 642
>gi|332298944|ref|YP_004440866.1| o-succinylbenzoate--CoA ligase [Treponema brennaborense DSM 12168]
gi|332182047|gb|AEE17735.1| Long-chain-fatty-acid--CoA ligase., o-succinylbenzoate--CoA ligase
[Treponema brennaborense DSM 12168]
Length = 635
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 223/398 (56%), Gaps = 29/398 (7%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYET 129
GDK L +LP WH ++R C Y I + L Y+ L D Q+ P + +VP V+E+
Sbjct: 226 GDKALCVLPVWHAFQRLCEYVILCQAAALCYSKPVGSILLADFQKLNPQLLPAVPRVFES 285
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAF-KRIYEGFCLTRNQKQ-PSYLVALIDW 187
+Y G+ + + + A + R + ++ +R++ N PS++V ++ W
Sbjct: 286 VYEGVFRLMRKTGGAVYALFRFFTAAAILHSKIDRRLFRKTARFGNDFLIPSWIVLVLPW 345
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
L +L+P+ LL LV+KKI++ +G S + GVSGGG+LP ID F+ AIGV +
Sbjct: 346 L-------LLYPIKLLGGVLVFKKIRAKLGNSFRGGVSGGGALPPQIDEFFWAIGVNIVE 398
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE++PV++ R V G+VG I E++IVDA+ N VLPAG KG+V+VRG VM
Sbjct: 399 GYGLTETAPVVSVRPLRKPVFGTVGSAIRGVEVRIVDAQGN-VLPAGKKGVVQVRGGTVM 457
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GY++ T + + GW +TGDIG + G +VL GR KDTIVL GE
Sbjct: 458 KGYYRRDDLTANVMRDGGWFDTGDIGMLT----------VDGEIVLRGRMKDTIVLRGGE 507
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELS 425
NVEPL +E S I Q VVIGQDQR GA+IVP +E+V A I + D S L
Sbjct: 508 NVEPLPIEMRLNESRYIAQSVVIGQDQRYLGALIVPSQEDVTAFADENCIRYTDYQSLLK 567
Query: 426 KEKTISLLYGELR-KWTSKCSF----QIGPIHVVDEPF 458
+++ I L E++ +K F +IG ++ +PF
Sbjct: 568 QDEIIKLFDSEIQGAINAKNGFKLFEKIGRFALLAKPF 605
>gi|408794606|ref|ZP_11206211.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461841|gb|EKJ85571.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 624
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 230/413 (55%), Gaps = 34/413 (8%)
Query: 38 LFSFVLIDLNTWMPIPKMTNFQIRSLYDIVPA------ENGDKFLSMLPPWHVYERACGY 91
LF+ + T MP M Q +Y++V ++ D+ LS+LP WH++ERA Y
Sbjct: 180 LFTIIYTSGTTGMPKGVMLTHQ-NMVYNVVKVPPRVGLKSSDRTLSILPVWHIFERAIDY 238
Query: 92 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 151
I + G + YT +R+L+DD Q+ +P +M S P ++E LY GI++++ + +R +
Sbjct: 239 AIIAEGASIAYTNIRDLRDDFQKIKPSFMASAPRLWENLYQGIKQKLEKAPENKRKL--- 295
Query: 152 LIRISFAYTAFKRIYEG-FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA---EKL 207
FAY K+ +G L N+ Q + + L LL+ + L
Sbjct: 296 ---FDFAYDICKKFKDGQDYLAGNKLQTKEESPFERAKNTAVSLGYVLNLFLLSKVLDGL 352
Query: 208 VYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 266
V+ KI+ +G G +SGGG+LP H+D F+ IG+ V GYG+TE +P+I+ R V
Sbjct: 353 VFSKIRDVLGGHLTGTISGGGALPAHVDEFFNVIGIPVYEGYGMTECAPIISVRSVGNVV 412
Query: 267 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 326
GSVG T +K+V+ + E +P G GI+ ++G QVM+GY+KN AT +A+ +DGW+
Sbjct: 413 QGSVGKWPEGTIVKVVN-DQGESVPKGKMGIIHIKGPQVMKGYYKNEEATSKAI-QDGWM 470
Query: 327 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 386
NTGD+G+I+ + + L + GR KDTIVL GENVEP+ +E L ++LI Q+
Sbjct: 471 NTGDLGFISFNDT----------LSVRGRVKDTIVLLGGENVEPVPIENLLLENALINQV 520
Query: 387 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 439
+V+GQDQ+ A+I PDKE + K + + +L++ K I L Y + K
Sbjct: 521 IVVGQDQKSLTALIWPDKERM----KEAGLNPKEGEDLNQNKEIRLYYQNIVK 569
>gi|294462826|gb|ADE76955.1| unknown [Picea sitchensis]
Length = 272
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/242 (50%), Positives = 174/242 (71%), Gaps = 1/242 (0%)
Query: 220 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 279
K G++ G S+P+H+D F+EAIG+ + YGLTE + + + R CNVLG+ G P++ E+
Sbjct: 2 KIGLTAGASIPLHVDQFFEAIGITLLNAYGLTEMTSIYSGRNTECNVLGTAGLPLHGIEV 61
Query: 280 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 339
K+VD ET +L +G KG++KVRG Q+M+GY+KN AT +A+D+D WL+TGD+GW+A
Sbjct: 62 KVVDPETGAILKSGEKGLIKVRGPQLMKGYYKNIDATMKAIDKDNWLDTGDLGWLASQKP 121
Query: 340 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 399
RRCGG++V+EGRAKDTIVLSTGENVEP+E+E AAL S+LI QIVV+GQDQRR GA+
Sbjct: 122 G-GGRRCGGMMVVEGRAKDTIVLSTGENVEPIEIEAAALESNLIEQIVVVGQDQRRLGAL 180
Query: 400 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFT 459
IVP+ E + + A+ L+ S+ + L+ EL + TS+C F IGP +++E FT
Sbjct: 181 IVPNMEAIQLEARELAKSKGITSQPTVGDFKELIRRELIEHTSRCPFHIGPFVLLEEHFT 240
Query: 460 VN 461
V+
Sbjct: 241 VD 242
>gi|254525931|ref|ZP_05137983.1| putative AMP-binding enzyme [Prochlorococcus marinus str. MIT 9202]
gi|221537355|gb|EEE39808.1| putative AMP-binding enzyme [Prochlorococcus marinus str. MIT 9202]
Length = 647
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/379 (38%), Positives = 211/379 (55%), Gaps = 27/379 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L I E G LS+LP WH YER+ YF FS G YT + LKDD+ + +P
Sbjct: 226 QIINLAYIADPEPGTSVLSVLPIWHSYERSAEYFFFSCGCSQYYTIPKFLKDDITQIKPV 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQKQ 177
M +VP ++E ++ G + + ++ + + LI S + FKR L NQ
Sbjct: 286 VMATVPRLWEAIHDGFFQALKKMPFKKQKLIKFLISNS---SVFKRSLRKIRNLDINQIT 342
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDL 235
+ L+ +IC +PLH L+ ++ I + K ++GGG+LP H+DL
Sbjct: 343 FESKIPLL----GSVICR--YPLHKLSNIFLWPNILRQLCGEKLKFPINGGGALPEHVDL 396
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+E++G+ V VGYGLTE+SPV+ RR NV GS G P+ TEIKIV+ + ++L
Sbjct: 397 FFESLGIDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLAFTEIKIVNDDKKKILKFREV 456
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G + VRG QVM+GY N ATK L +DGW +TGD+G++ P+ G L + GR
Sbjct: 457 GKILVRGPQVMKGYLNNEIATKDVLSKDGWFDTGDLGFLIPN----------GSLFITGR 506
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
AKDTIVLS+GEN+EP LE L S I QI ++GQD++ A++VP+ E V +
Sbjct: 507 AKDTIVLSSGENIEPNPLETEILSSEFINQIQLVGQDKKCLTALVVPNVELV-----KSK 561
Query: 416 IVHADASELSKEKTISLLY 434
+ D S+L+ K I +
Sbjct: 562 FLEEDLSKLNLNKNIGTFF 580
>gi|307718544|ref|YP_003874076.1| hypothetical protein STHERM_c08540 [Spirochaeta thermophila DSM
6192]
gi|306532269|gb|ADN01803.1| hypothetical protein STHERM_c08540 [Spirochaeta thermophila DSM
6192]
Length = 636
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 216/380 (56%), Gaps = 26/380 (6%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
FQI L + E GD FLS+LP WH +ERA Y + RG + Y+ + L +D+ +
Sbjct: 213 FQIDKLKKPLNVEVGDIFLSILPIWHSFERAVDYILMERGGAVAYSKPVGKILLEDMTKV 272
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC---LT 172
+P ++ +VP V+E + + + + + A RV+ + + Y F ++ G L
Sbjct: 273 RPQWLAAVPRVFEGIRNAVYRNVNKGPAVSRVLFHFFVGVGELYAYFSNMFRGLLPDFLP 332
Query: 173 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
RN+ ++D + A + A+L P L E LV++K+++ +G K GVSGGG+LP
Sbjct: 333 RNR--------ILDKVVAFVPLALLAPFRGLGEVLVFRKLKAKLGGRFKTGVSGGGALPP 384
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
H+D F++A+G++V GYGLTE+ PV+A R ++G+VG ++ E K++D N LP
Sbjct: 385 HVDTFFQAVGIQVLEGYGLTETGPVLAVRDQKAPMVGTVGPLLDEVEYKVLDEHGNP-LP 443
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G KG++ V+ QVM GY+K P AT + L +DGWLNTGD+ + GR
Sbjct: 444 PGHKGVLWVKSPQVMLGYYKRPEATAEVL-KDGWLNTGDL----VRFTHGRE------FA 492
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
+ GRAKDTIVL GENVEP +EE S I VV+GQDQ+ GA+IVP++E + A
Sbjct: 493 IVGRAKDTIVLRGGENVEPGPIEEKLKESEFIENAVVVGQDQKFLGALIVPNRERIEEYA 552
Query: 412 KRLSIVHADASELSKEKTIS 431
+ + + + +L ++ +
Sbjct: 553 REKGLSYMEYEDLVEQAEVQ 572
>gi|224003691|ref|XP_002291517.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973293|gb|EED91624.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 792
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 228/440 (51%), Gaps = 58/440 (13%)
Query: 64 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 123
YD G+ LS+LP WH+ ER F+ RG ++Y+ +R K+DL +YQP +M+ V
Sbjct: 343 YDETEPLPGELMLSLLPVWHITERTFELFMLVRGCHVVYSGIRWFKNDLAKYQPQWMVLV 402
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P V E + G+Q + + AA + + + S ++I +G + P
Sbjct: 403 PRVLEKVAFGVQDKFASGGAAVKALVKLFTATSTLKNKHQKIRKGLVVGDEPPTP----- 457
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGV 242
+D + + II L PL+ L KLV+KK+Q G + +SGG +L ++ FYE G+
Sbjct: 458 -MDGIISTIIVKALAPLNFLGNKLVWKKVQDGFGGRQRVIISGGSALAGSLETFYENCGI 516
Query: 243 KVQVGYGLTESSPVIAARRPTCNVL--GSVGHPINHTEIKIVDAETN------EVLPAGS 294
+ VGYGLTE SP+++ RR N++ G VG TE+++VD E N + LP G
Sbjct: 517 DILVGYGLTECSPLLSYRRTDSNLVTAGCVGFAATDTELRVVDPEANPENGERKALPDGL 576
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
G+V RG QVM+GY+KNP AT +A+D+ GW +TGD+G I P G L+L G
Sbjct: 577 AGVVLGRGPQVMKGYYKNPEATGKAVDKWGWFDTGDLGRINP---------ATGDLILTG 627
Query: 355 RAKDTIVLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA--- 410
RAKDTIVLS GEN+EP +E+A + S L+ Q+++ GQD R AI V E++ A
Sbjct: 628 RAKDTIVLSNGENIEPQPIEDAIMSESDLVEQVMLSGQDGRSLIAITVLSPNELVNAGLL 687
Query: 411 ----AKRLSIVH----------------------ADASELSKEKTISLLYGELRKWTSKC 444
AK++ H A A +K + E+++ TS
Sbjct: 688 EESRAKQILKDHDIVNDPKCSEEECAEACERLAKASAEIRAKGAVTKQVASEVKRATSSG 747
Query: 445 SF----QIGPIHVVDEPFTV 460
SF Q+ ++V EPF +
Sbjct: 748 SFRKWEQVSDVYVTLEPFAM 767
>gi|157412815|ref|YP_001483681.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9215]
gi|157387390|gb|ABV50095.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9215]
Length = 647
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 210/378 (55%), Gaps = 25/378 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L I E G LS+LP WH YER+ YF FS G YT + LKDD+ + +P
Sbjct: 226 QIINLAYIADPEPGTSVLSVLPIWHSYERSAEYFFFSCGCSQYYTIPKFLKDDITQIKPV 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M +VP ++E ++ G + + ++ + + LI S + + R L NQ
Sbjct: 286 VMATVPRLWEAIHDGFFQVLKKMPFKKQKLIKFLIGNSSVFKSSLRKIRN--LDINQITF 343
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLF 236
+ L+ +IC +PLH L+ ++ I + K ++GGG+LP H+DLF
Sbjct: 344 KSKIPLL----GSVICR--YPLHKLSNIFLWPNILRQLCGEKLKFPINGGGALPEHVDLF 397
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+E++GV V VGYGLTE+SPV+ RR NV GS G P+ TEIKIV+ + ++L G
Sbjct: 398 FESLGVDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLAFTEIKIVNDDKKKILKFREVG 457
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+ VRG QVM+GY N ATK L +DGW +TGD+G++ P+ G L + GRA
Sbjct: 458 KILVRGPQVMKGYLNNEIATKDVLSKDGWFDTGDLGFLIPN----------GSLFITGRA 507
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
KDTIVLS+GEN+EP LE L S I QI ++GQD++ A++VP+ E V +
Sbjct: 508 KDTIVLSSGENIEPNPLETEILSSEFINQIQLVGQDKKCLTALVVPNIELV-----KSKF 562
Query: 417 VHADASELSKEKTISLLY 434
+ D S+L+ K I +
Sbjct: 563 LEEDLSKLNLNKNIGTFF 580
>gi|123967990|ref|YP_001008848.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str.
AS9601]
gi|123198100|gb|ABM69741.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. AS9601]
Length = 647
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 206/382 (53%), Gaps = 33/382 (8%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L I E G LS+LP WH YER+ YF FS G YT + LKDD+ + +P
Sbjct: 226 QIINLAYIADPEPGTCVLSVLPIWHSYERSAEYFFFSCGCSQYYTIPKFLKDDITQIKPV 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR---NQ 175
M +VP ++E ++ G + + + ++ + + LI S + R F + +
Sbjct: 286 VMATVPRLWEAIHDGFFQALKKMPSKKQKLIKFLISNSSVFKRSLRKIRNFDINKITFKS 345
Query: 176 KQPSYLVALIDWLWARIICAILWP---LHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH 232
K P + + ++ LWP L EKL K ++GGG+LP H
Sbjct: 346 KIPLLGSVISRYPLHKLSTIFLWPNILRQLCGEKL------------KFPINGGGALPEH 393
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
+DLF+E++GV V VGYGLTE+SPV+ RR NV GS G P+ TEIKIV+ + +L
Sbjct: 394 VDLFFESLGVDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLAFTEIKIVNDDKKNILKF 453
Query: 293 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 352
G + VRG QVM+GY N AT + L +DGW +TGD+G++ P+ G L +
Sbjct: 454 REVGKILVRGPQVMKGYLNNEIATNEVLSKDGWFDTGDLGFLIPN----------GSLFI 503
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 412
GRAKDTIVLS+GEN+EP LE L S I QI ++GQD++ A++VP+ E V
Sbjct: 504 TGRAKDTIVLSSGENIEPNPLETEILSSEFINQIQLVGQDKKCLTALVVPNVELV----- 558
Query: 413 RLSIVHADASELSKEKTISLLY 434
+ + D S+L+ K I +
Sbjct: 559 KSKFLEEDISKLNLNKNIGTFF 580
>gi|126695760|ref|YP_001090646.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9301]
gi|126542803|gb|ABO17045.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9301]
Length = 647
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 144/379 (37%), Positives = 212/379 (55%), Gaps = 27/379 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L I E G LS+LP WH YER+ YF FS G YT + LKDD+ + +P
Sbjct: 226 QIINLAYIADPEPGTSVLSVLPIWHSYERSAEYFFFSCGCTQYYTIPKFLKDDITQIKPV 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQKQ 177
M +VP ++E ++ G + + + ++ + + LI S + FKR + NQ
Sbjct: 286 VMATVPRLWEAIHDGFFQALKKMPSKKQKLIKFLISNS---SVFKRSLRKIRNIDINQIT 342
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDL 235
+ L+ + +R +PLH L+ ++ I + K ++GGG+LP H+DL
Sbjct: 343 FKSKIPLLGSVISR------YPLHKLSTIFLWPNILRQLCGEKLKFPINGGGALPEHVDL 396
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+E++GV V VGYGLTE+SPV+ RR NV GS G P++ TEIKIV+ + ++L
Sbjct: 397 FFESLGVDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLSFTEIKIVNDDKKKILKFREV 456
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G + VRG QVM+GY N AT L +DGW +TGD+G++ P+ G L + GR
Sbjct: 457 GKILVRGPQVMRGYLNNEIATNDVLSKDGWFDTGDLGFLIPN----------GSLFITGR 506
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
AKDTIVLS+GEN+EP LE L S I QI ++GQD++ A++VP+ E V +
Sbjct: 507 AKDTIVLSSGENIEPNPLETEILSSEFINQIQLVGQDKKCLTALVVPNVELV-----KSK 561
Query: 416 IVHADASELSKEKTISLLY 434
+ D S+L+ K I +
Sbjct: 562 FLEEDLSKLNLNKKIGTFF 580
>gi|78778783|ref|YP_396895.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9312]
gi|78712282|gb|ABB49459.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9312]
Length = 647
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/417 (36%), Positives = 224/417 (53%), Gaps = 46/417 (11%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L I G LS+LP WH YER+ YF FS G YT + LKDD+ + +P
Sbjct: 226 QIINLAHIADPGPGTSVLSVLPIWHSYERSAEYFFFSCGCTQYYTIPKFLKDDITQIKPV 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT-AFKRI--YEGFCLTRNQ 175
M +VP ++E ++ G + + + ++ + + LI S + + ++I + F T
Sbjct: 286 VMATVPRLWEAIHDGFFQALKKMPSKKQKLIKFLISNSSVFKISLRKIRNLDIFQTTFIA 345
Query: 176 KQPSYLVALIDWLWARIICAILWP---LHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH 232
K P L + ++ LWP L EKL K ++GGG+LP H
Sbjct: 346 KIPLLFSVLGRYPLHKLSSVFLWPNILRQLCGEKL------------KFPINGGGALPEH 393
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
+DLF+E++G+ V VGYGLTE+SPV+ RR NV GS G P+ TEIKIV+ + ++L
Sbjct: 394 VDLFFESLGIDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLAFTEIKIVNEDKKKILKF 453
Query: 293 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 352
G + V+G QVM+GY N ATK L +DGW +TGD+G++ P+ G L +
Sbjct: 454 REVGKILVKGPQVMKGYLNNDLATKDVLSKDGWFDTGDLGFLIPN----------GSLFI 503
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 412
GRAKDTIVLS+GEN+EP LE L S I Q+ ++GQD++ A++VP+ E V
Sbjct: 504 TGRAKDTIVLSSGENIEPNPLETEILSSEFINQVQLVGQDKKCLTALVVPNVELV----- 558
Query: 413 RLSIVHADASELSKEKTI---------SLLYGELRKWTSKCSFQIGPIHVVDEPFTV 460
+ + D S+L+ K I +LL G L T + QI + VD PFT+
Sbjct: 559 KNKFLEEDLSKLNLNKNIGIFFKSQINNLLKGRLGARTEE---QILDCYFVD-PFTL 611
>gi|91070346|gb|ABE11263.1| putative long-chain-fatty-acid--CoA ligase [uncultured
Prochlorococcus marinus clone HF10-88F10]
Length = 647
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/379 (37%), Positives = 211/379 (55%), Gaps = 27/379 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L I E G LS+LP WH YER+ YF FS G YT + LKDD+ + +P
Sbjct: 226 QIINLAYIADPEPGTSVLSVLPIWHSYERSAEYFFFSCGCSQYYTIPKFLKDDITQIKPV 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQKQ 177
M +VP ++E ++ G + + ++ + + LI S + FKR + NQ
Sbjct: 286 VMATVPRLWEAIHDGFFQALKKMPFKKQKLIKFLISNS---SVFKRSLRKIRNIDINQIT 342
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDL 235
+ L+ + +R +PLH L+ ++ I + K ++GGG+LP H+DL
Sbjct: 343 FKSKIPLLGSVISR------YPLHKLSTIFLWPNILRQLCGEKLKFPINGGGALPEHVDL 396
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+E++GV V VGYGLTE+SPV+ RR NV GS G P+ TEIKIV+ + ++L
Sbjct: 397 FFESLGVDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLAFTEIKIVNDDKKKILKFREV 456
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G + V+G QVM+GY N ATK L +DGW +TGD+G++ P+ G L + GR
Sbjct: 457 GKILVKGPQVMKGYLNNELATKDVLSKDGWFDTGDLGFLIPN----------GSLFITGR 506
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
AKDTIVLS+GEN+EP LE L S I QI ++GQD++ A++VP+ E V +
Sbjct: 507 AKDTIVLSSGENIEPNPLETEILSSEFINQIQLVGQDKKCLTALVVPNLELV-----KNK 561
Query: 416 IVHADASELSKEKTISLLY 434
+ D S+L+ K I +
Sbjct: 562 FLEEDLSKLNLNKNIGTFF 580
>gi|386347051|ref|YP_006045300.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
gi|339412018|gb|AEJ61583.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
Length = 636
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 214/380 (56%), Gaps = 26/380 (6%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
FQI L + E GD FLS+LP WH +ERA Y + RG + Y+ + L +D+ +
Sbjct: 213 FQIDKLKKPLDVEVGDIFLSILPIWHSFERAVDYVLMERGGAVAYSKPVGKILLEDMAKV 272
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC---LT 172
P ++ +VP V+E + + + + + A RV+ + + Y F ++ G L
Sbjct: 273 SPQWLAAVPRVFEGIRNAVYRNVNKGPAVSRVLFHFFVGVGQLYAYFSNMFRGLLPDFLP 332
Query: 173 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
RN+ ++D + A + +L P L E LV++K+++ +G K GVSGGG+LP
Sbjct: 333 RNR--------ILDKVVAFLPLVLLAPFRGLGEVLVFRKLKAKLGGRFKTGVSGGGALPP 384
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
H+D F++A+G++V GYGLTE+ PV+A R ++G+VG ++ E K+V E + LP
Sbjct: 385 HVDTFFQAVGIQVLEGYGLTETGPVLAVRNQKAPMVGTVGPLLDEVEYKVV-GEHGDPLP 443
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G KG++ V+ QVM GY+K P AT + L +DGWLNTGD+ + GR
Sbjct: 444 PGHKGVLWVKSPQVMLGYYKRPEATAEVL-KDGWLNTGDL----VRFTHGRE------FA 492
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
+ GRAKDTIVL GENVEP +EE S I +V+GQDQ+ GA+IVP++E + A
Sbjct: 493 IVGRAKDTIVLRGGENVEPGPIEEKLKESEFIENAMVVGQDQKFLGALIVPNRERIEEYA 552
Query: 412 KRLSIVHADASELSKEKTIS 431
+ + + + +L ++ +
Sbjct: 553 REKGLTYMEYEDLVEQAEVQ 572
>gi|183221263|ref|YP_001839259.1| long-chain acyl-CoA synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911354|ref|YP_001962909.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776030|gb|ABZ94331.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779685|gb|ABZ97983.1| Long-chain acyl-CoA synthetase, AMP-forming [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 624
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 234/413 (56%), Gaps = 34/413 (8%)
Query: 38 LFSFVLIDLNTWMPIPKMTNFQIRSLYDIVPA------ENGDKFLSMLPPWHVYERACGY 91
LF+ + T MP M Q +Y++V ++ D+ LS+LP WH++ERA Y
Sbjct: 180 LFTIIYTSGTTGMPKGVMLTHQ-NMVYNVVKVPPRVGLKSTDRTLSILPVWHIFERAIDY 238
Query: 92 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 151
I + G + YT +R+L+DD Q+ +P +M S P ++E LY GI++++ + ++ +
Sbjct: 239 AIITEGASIAYTNIRDLRDDFQKIKPSFMASAPRLWENLYLGIKQKLEKAPENKKKL--- 295
Query: 152 LIRISFAYTAFKRIYEG-FCLTRNQ---KQPSYLVALIDWLWARIICAILWPLHLLAEKL 207
FAY K+ +G L N+ K+ S + + + L+ L L + L
Sbjct: 296 ---FDFAYDICKKFKDGQDYLAGNRLLTKEESPFERMKNTTVSIGYVLNLFLLAKLLDGL 352
Query: 208 VYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 266
V+ KI+ +G G +SGGG+LP H+D F+ IG+ V GYG+TE +P+I+ R V
Sbjct: 353 VFSKIRDVLGGHLTGTISGGGALPSHVDEFFNVIGIPVYEGYGMTECAPIISVRSVGHVV 412
Query: 267 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 326
GSVG T ++IV+ E E +P G G++ ++G QVM+GY+KN ATK+A+ DGW+
Sbjct: 413 QGSVGKWPEGTAVRIVN-EQGESVPKGKMGVIHIKGPQVMKGYYKNEEATKKAI-VDGWM 470
Query: 327 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 386
NTGD+G+I+ + + L + GR KDTIVL GENVEP+ +E L ++LI Q+
Sbjct: 471 NTGDLGFISFNDT----------LSVRGRVKDTIVLLGGENVEPVPIENLLLENALINQV 520
Query: 387 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 439
+V+GQDQ+ A++ PDKE + K + + + +L++ K + L Y + K
Sbjct: 521 IVVGQDQKSLTALVWPDKERM----KEVGLQWKEGEDLNQNKDVRLYYQNIVK 569
>gi|194477166|ref|YP_002049345.1| putative long-chain-fatty-acid--CoA ligase [Paulinella
chromatophora]
gi|171192173|gb|ACB43135.1| putative long-chain-fatty-acid--CoA ligase [Paulinella
chromatophora]
Length = 645
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 228/407 (56%), Gaps = 27/407 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QIR+L +V + + LS+LP WH YER+ YF+ S G YT ++ L+ DLQ +P
Sbjct: 231 QIRTLRVVVEPHSNENTLSILPIWHAYERSIEYFLLSCGCCQNYTNLKKLRKDLQHIKPI 290
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y++SVP +++ L G + + + + R +++S + R + + +
Sbjct: 291 YLVSVPRLWQALMEGFEDNLSNLPSHVNYLIRVFLKLSRYNRSRWRFAQNLSIQPVCNKA 350
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKI-QSAIG-ISKAGVSGGGSLPMHIDLF 236
+L A I I WP H+LA ++ K+ Q +G + + GGG+L +ID F
Sbjct: 351 RFL--------AGIEVLITWPSHVLASITIWPKVRQQLVGDLLTTAICGGGALGAYIDSF 402
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+EAIG+++ VGYGLTE+SPV+ RR + N+ S G P+ T+++I+D+ + L G KG
Sbjct: 403 FEAIGIELLVGYGLTETSPVLTCRRRSANIRESAGRPLPLTDLRIIDSSSARPLGWGEKG 462
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+ RG QVM+GY++ + L+ + W +TGD+G++ P G L+L GRA
Sbjct: 463 RILARGPQVMKGYYRESDSNMTILNGESWFDTGDLGYLLPD----------GSLILTGRA 512
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
K+TIVL+ GEN+EP+ LE S L+ QI++IGQDQR+ A+IVP E + + +I
Sbjct: 513 KETIVLNNGENIEPVVLEVTLSASPLVEQIILIGQDQRQLAALIVPCFEAIGNLMQVRNI 572
Query: 417 VHADASELS---KEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 460
++ D + KE+ +L G + S+ + ++ I +V EPF++
Sbjct: 573 LNNDLPLIMNAIKEELNRILAGRI---GSRLNERLAGIALV-EPFSI 615
>gi|33860959|ref|NP_892520.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33639691|emb|CAE18861.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 641
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 208/385 (54%), Gaps = 39/385 (10%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
QI +L +I E G LS+LP WH YER+ YF FS G YT + LKDD+++ +P
Sbjct: 226 QIINLANIADPEPGTSVLSVLPIWHSYERSAEYFFFSCGCTQFYTNPKFLKDDIKQVKPV 285
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQ-- 175
M +VP ++E ++ G + + + + FKR L NQ
Sbjct: 286 VMATVPRLWEAIHDGF---FLALKKMPPKKQKIIKILIKNSSIFKRNLRKIRNLEINQVS 342
Query: 176 --KQPSYLVALIDWLW-ARIICAILWP---LHLLAEKLVYKKIQSAIGISKAGVSGGGSL 229
+ S +++I + +I LWP L EKL K ++GGG+L
Sbjct: 343 SLAKISLTISVIGRFFIHKISSTFLWPSILKQLCGEKL------------KFPINGGGAL 390
Query: 230 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 289
P H+DLF+E++G+ V VGYGLTE+SPV+ RR NV GS G P+ TEIKI++ E +++
Sbjct: 391 PEHVDLFFESLGIDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLAFTEIKIMNEEKDKI 450
Query: 290 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 349
L G + V+G QVM+GY N SATK L +DGW +TGD+G++ P+ G
Sbjct: 451 LKFKEIGKILVKGPQVMKGYLNNISATKDVLSKDGWFDTGDLGFLIPN----------GS 500
Query: 350 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 409
LV+ GRAKDTIVLS+GEN+EP LE L S I Q+ ++GQD++ A++ P+ E V
Sbjct: 501 LVITGRAKDTIVLSSGENIEPNPLETEILSSEFINQVQLVGQDKKCLTALVAPNIELV-- 558
Query: 410 AAKRLSIVHADASELSKEKTISLLY 434
D S+L+ K I L +
Sbjct: 559 ---ENKFFENDISKLNSNKKIGLFF 580
>gi|397645678|gb|EJK76946.1| hypothetical protein THAOC_01260 [Thalassiosira oceanica]
Length = 777
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 209/379 (55%), Gaps = 29/379 (7%)
Query: 64 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 123
YD G+ LS+LP WH+ ER F+ SRG ++++ +R K+DL +++P +++ V
Sbjct: 329 YDESEPLPGELMLSLLPVWHITERTFELFMLSRGCYVVFSGIRWFKNDLAKHRPQWLVLV 388
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P V E + G+Q + S + + + + S +I G + + P
Sbjct: 389 PRVLEKVALGVQDKFAAGSVVVKGLVKLFTKTSTLKNKHSKIRNGLVVGSDAPTP----- 443
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGV 242
D + + +I L PL+ + KLV+ K+Q G K+ +SGG +L ++ FYE +G+
Sbjct: 444 -FDGIVSSLIVKALAPLNFVGNKLVWSKVQDGFGGRQKSIISGGSALAGSLETFYENVGI 502
Query: 243 KVQVGYGLTESSPVIAARRPTCNVL--GSVGHPINHTEIKIVDAETNE------VLPAGS 294
+ VGYGLTE +P++A RR CN++ G VG P + TE+++VD E+ LP G
Sbjct: 503 DILVGYGLTECAPLLAHRRSDCNLVTAGCVGFPCSDTELRVVDPESKAEDGERISLPIGQ 562
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
G+V RG QVM+GY+KN AT A+D G+ +TGD+G I P G L+L G
Sbjct: 563 AGVVIGRGPQVMKGYYKNAEATSNAIDRFGFFDTGDLGRINP---------LTGDLILTG 613
Query: 355 RAKDTIVLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIV--PDK--EEVLM 409
RAKDTIVLS GEN+EP +E+A L SSL+ Q+++ GQD R AI V P+ E L+
Sbjct: 614 RAKDTIVLSNGENIEPQPIEDAILSHSSLVEQVMLSGQDGRSLLAITVLNPNALVEAGLL 673
Query: 410 AAKRLSIVHADASELSKEK 428
A RL + D ++ K
Sbjct: 674 DASRLKAIMNDYDAVNNPK 692
>gi|183221027|ref|YP_001839023.1| putative long-chain-fatty-acid CoA ligase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189911121|ref|YP_001962676.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775797|gb|ABZ94098.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779449|gb|ABZ97747.1| Putative long-chain-fatty-acid CoA ligase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 644
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 236/453 (52%), Gaps = 46/453 (10%)
Query: 38 LFSFVLIDLNTWMPIPKM---------TNFQIRSLYDIVPAENGDKFLSMLPPWHVYERA 88
LF+ + T MP M T + S+ DI E + LS+LP WHV+ER
Sbjct: 178 LFTIIYTSGTTGMPKGVMLKHSNMIHQTTAILGSMIDIKADE---RMLSILPVWHVFERV 234
Query: 89 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSAAR 145
Y + G YT VR+L+DD+++ +P +M S P ++E++Y+GI +I + A R
Sbjct: 235 FEYLAIAAGCATYYTNVRDLRDDMKKAKPTFMASAPRLWESIYNGIYTRINDPKQTPAIR 294
Query: 146 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 205
R + S + A R +G + + P +V+L ++ + +L + L +
Sbjct: 295 RGLFNLAYFFSKHFNASMRFLKGNQVDYVGRNP--IVSLFKGVYYLTVAIVLAVPYFLLD 352
Query: 206 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 264
+V KI+ A G KA VSGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 353 LVVLSKIREATGGELKASVSGGGALQRHVDAFFNDIGINVLEGYGMTETSPVISVRTFKK 412
Query: 265 NVLGSVGHPINHTEIKIVD--------AETNEVLPAG---SKGIVKVRGSQVMQGYFKNP 313
V GSVG T ++I D + N L +G +G++ +RG QVM+GY+KNP
Sbjct: 413 LVQGSVGVITPETSVQIRDDLGKVLTHVDANNQLVSGKYGQRGVIHIRGPQVMKGYYKNP 472
Query: 314 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 373
T + L +DGW++TGDIG + L + GRAKDT+VL GENVEP+ +
Sbjct: 473 ETTAKVL-KDGWMDTGDIGMFNFKKT----------LTITGRAKDTVVLLGGENVEPVPI 521
Query: 374 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISL 432
E+ S I Q +VIGQDQ+ GAI++PD ++++ AK I D +L K +
Sbjct: 522 EDKLTESPFISQCMVIGQDQKNLGAIVIPDFDQLMAWAKENGISETDKQKLIENPKVLDF 581
Query: 433 LYGELRKW-TSKCSF----QIGPIHVVDEPFTV 460
E++ +K F Q+ P ++ +PF V
Sbjct: 582 YKKEIKALNNTKTGFKSFEQVTPFILITKPFEV 614
>gi|392401755|ref|YP_006438367.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390609709|gb|AFM10861.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 628
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 215/374 (57%), Gaps = 25/374 (6%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D LS+LP WH++ERA + G + +YT V++LK D+Q +P +M S P ++E++Y+
Sbjct: 221 DVMLSILPIWHIFERAFEIISIASGAKTVYTNVKHLKADMQSVKPTFMASAPRLWESIYN 280
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR- 191
GI ++ S +R + A I ++ Y R G L Q P + + + +
Sbjct: 281 GILTKVAEGSPIKRALFHAAISVNHVYRQALREMRGQNL---QILPQNIFMRMAAILSST 337
Query: 192 -IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
+I A + P LL + +V KI++A G +A +SGGG+LP+HID F+ IG+ V GYG
Sbjct: 338 LVIIATVVPA-LLLDAVVLSKIRAATGGRLRATISGGGALPLHIDEFFNDIGIAVLEGYG 396
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL-PA----GSKGIVKVRGSQ 304
+TE+SP+I+ R P V+GSVG + TEI++VD T + P G KG + V+G Q
Sbjct: 397 MTETSPIISVRLPENAVIGSVGPLYSETEIRLVDIATGATIYPGRDYFGRKGELHVKGPQ 456
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
VM GY+KNP AT + L ++GW+NTGD+ + G L + GR+K+TIVL
Sbjct: 457 VMAGYYKNPEATAKVL-KNGWMNTGDLAIMT----------ANGCLKIVGRSKETIVLMN 505
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV--HADAS 422
GENVEP+ +E L S LI Q +V+GQDQ+ A+IVP E + L + +A+
Sbjct: 506 GENVEPVPIESKLLESPLIEQCMVVGQDQKFLAALIVPRTEALKQFGTDLQTLAQNAEVK 565
Query: 423 ELSKEKTISLLYGE 436
+L K +T L+ GE
Sbjct: 566 KLLKAETHRLISGE 579
>gi|374621808|ref|ZP_09694338.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
gi|373940939|gb|EHQ51484.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
Length = 629
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 222/388 (57%), Gaps = 25/388 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
IR+L ++ D ++S+LP WH++ER Y +RG L+Y+++R DL+ Y+P
Sbjct: 206 NIRTLPPLIALNETDVWVSILPSWHIFERTAEYIGIARGSCLVYSSIRTFAQDLETYRPT 265
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ--- 175
+ +VP V+E LY+ I ++ + V L+R+S Y +RI R+Q
Sbjct: 266 LVATVPRVWEALYTRITTELKKKDPKKARVFSLLVRVSATYRRNQRIL------RDQLPV 319
Query: 176 -KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
+P L D A + +L+ +LLA K ++ +Q G KA +SGGGSLP ++
Sbjct: 320 FAKPPVLRRAGDKTRAALTNVLLFLPNLLARK-KFRLVQEKFGGRLKAAISGGGSLPPYL 378
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D + +AIG+++ YG+TE SP IA R C+V G++G + TE++IVDA T++ LP G
Sbjct: 379 DEWIDAIGIRIINAYGMTECSPGIAGRGLGCHVFGTLGPAVGETELRIVDA-TDQPLPPG 437
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
++G ++VRG+QV +GY+ N A QA DG+L TGD+G + G LV+
Sbjct: 438 TEGEIQVRGAQVFKGYYDNDIANAQAFTNDGFLRTGDLGRMT----------LTGELVIT 487
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL-MAAK 412
GRAKD IVL++GENV+P +E ++ V++GQD++ GA+IVPD E++ +
Sbjct: 488 GRAKDIIVLASGENVDPTNIEATLSMFPFVKDAVLVGQDKKGLGALIVPDMEKLREFVQE 547
Query: 413 RLSIVHADASELSKEK-TISLLYGELRK 439
+ + + +A E K+K + L GE+ K
Sbjct: 548 KYNQIVGEADEALKDKHLLDRLRGEMNK 575
>gi|343127895|ref|YP_004777826.1| AMP-binding protein [Borrelia bissettii DN127]
gi|342222583|gb|AEL18761.1| AMP-binding enzyme family protein [Borrelia bissettii DN127]
Length = 645
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 234/413 (56%), Gaps = 24/413 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P +ISVP ++E + GI K++ + S +++V ++I Y K + G L+
Sbjct: 270 LNPQMIISVPRIWEGIRIGIIKKV-SESFIKKLVFGGFLKIGIVYAKLKERFLG--LSPI 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ S ++L L+ + +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKTSLFISLFSKLFIFVGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + N VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGFDGN-VLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMNGYFKDKAKTNEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 460
+ + S+L + ++ LY + T +K F +I ++ +PF++
Sbjct: 556 SGVSFSSRSDLLANEDVNKLYSKHISDTINTKVGFKNFEKIAGFVLLQDPFSI 608
>gi|418744637|ref|ZP_13300990.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|418753073|ref|ZP_13309329.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|409966756|gb|EKO34597.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|410794519|gb|EKR92421.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 683
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 237/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVP-----AENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + + + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMVHQMVHVVPMLLTNTKPTDSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++ R+
Sbjct: 240 YGAISRGIQTYYTKVTDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKF 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNILKSVAIGTKSLIVLLLTGPFTLSAMAILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P+Y V L +WL+ I L + +V KI++A G K +SGGG+L H
Sbjct: 360 YLTLPTYGVRLPNWLFFTIAGLGLIFNAKTLDAIVLSKIRAATGGRLKGSLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
E+L G KG+V V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDKFEILAGKLGQKGVVFVKGPQVMKGYYKNPEVTKKTI-ADGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQD++ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E++ + K I + +L K K I E+R + S K F Q+ I +
Sbjct: 589 PDMEQLTLWCKENEIDSSKIDDLIKNPKVIDFYKKEVRNYNSTKTGFKSFEQVQHIILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|225619495|ref|YP_002720752.1| Long-chain acyl-CoA synthetase [Brachyspira hyodysenteriae WA1]
gi|225214314|gb|ACN83048.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
hyodysenteriae WA1]
Length = 625
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 217/414 (52%), Gaps = 36/414 (8%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
+R L DI+ G+K L++LP WH+YER Y G T R LK+D +P
Sbjct: 204 NVRVLPDIIKLHPGEKLLTILPIWHIYERTISYVTAVTGCFTAITNKRYLKNDFTEEKPD 263
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL-----TR 173
ISVP ++ +Y+ + K I SA R +A+ I+ S Y R +
Sbjct: 264 IFISVPAIWVNIYNTVMKNIDRKSAFTRNLAKFFIKRSIKYIRSLRFQNDLIYLLGDENK 323
Query: 174 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
N K+ Y + + D ++ H +A K+VY KI+ G + +SGGG+LPM+
Sbjct: 324 NDKKAEYSIGMFDPIY-----------HKMATKMVYSKIRELTGGKMRLTISGGGALPMY 372
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
I+ F EA+G+ + VG+G+TE+SPV+ R P N G+ G PI +I++ D E N +
Sbjct: 373 IEDFIEAVGINLIVGWGITETSPVVTLRSPYKNYRGTCGTPIPEVKIEVRDKEGN-ICKD 431
Query: 293 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 352
G G+ ++G + + Y+K+P TKQA DG+ N+GD+G G +VL
Sbjct: 432 GVMGVCYIKGPNIFKEYYKDPELTKQA-KIDGFFNSGDLGTYTQQ----------GEIVL 480
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 412
GRAK+TIVL TGENVEP +E AL S I QI+++GQD+ GAIIV +KE +
Sbjct: 481 TGRAKETIVLLTGENVEPQPIENKALESPYISQIMLVGQDKASTGAIIVINKENIKEHFD 540
Query: 413 RLSIVHADASELSKEKTI-SLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 460
+ I H D + L+ K + L+ EL + + F+ I + + DE FT+
Sbjct: 541 KQKI-HYDENTLASSKDVYKLMREELDNLINYRNGFRPYEAIAKMIITDEEFTI 593
>gi|422005407|ref|ZP_16352593.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417255906|gb|EKT85355.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 683
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 237/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVP-----AENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + + + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMVHQMVHVVPMLLTNTKPTDSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++ R+
Sbjct: 240 YGAISRGIQTYYTKVTDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKF 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNILKSVAIGTKSLIVLLLTGPFTLSAMAILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P+Y V L +WL+ I L + +V KI++A G K +SGGG+L H
Sbjct: 360 YLTLPTYGVRLPNWLFFTIAGLGLIFNAKTLDAIVLSKIRAATGGRLKGSLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
E+L G KG+V V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDKFEILAGKLGQKGVVFVKGPQVMKGYYKNPEVTKKTI-ADGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQD++ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E++ + K I + +L K K I E+R + S K F Q+ I +
Sbjct: 589 PDMEQLTLWCKENEIDSSKIDDLIKNPKVIDFYKKEVRNYNSTKTGFKSFEQVQHIILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|408794555|ref|ZP_11206160.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461790|gb|EKJ85520.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 644
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 239/450 (53%), Gaps = 40/450 (8%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNFQIRS---LYDIVPAENGDKFLSMLPPWHVYERACGY 91
LF+ + T MP + K +N ++ L ++ + ++ LS+LP WHV+ER Y
Sbjct: 178 LFTIIYTSGTTGMPKGVMLKHSNMIHQTSVILGSMIEIKQDERMLSILPVWHVFERVFEY 237
Query: 92 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSAARRVV 148
+ G YT VR+L+DD+++ +P +M S P ++E++Y+GI +I + A RR +
Sbjct: 238 LAIAAGCATYYTNVRDLRDDMKKAKPTFMASAPRLWESIYNGIYTRINDPKQTPALRRGL 297
Query: 149 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 208
S + A R +G + + P +V+L + + IL + L + +V
Sbjct: 298 FNLAYFFSKHFNAATRFLKGNQVDYVGRNP--IVSLFKGFYYLTVAIILAVPYFLLDLVV 355
Query: 209 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 267
KI+ A G KA VSGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R V
Sbjct: 356 LSKIREATGGELKASVSGGGALQRHVDAFFNDIGINVLEGYGMTETSPVISVRTFKKLVQ 415
Query: 268 GSVGHPINHTEIKIVD--------AETNEVLPAG---SKGIVKVRGSQVMQGYFKNPSAT 316
GSVG T ++I D + N+ L +G ++G++ +RG QVM+GY+KNP T
Sbjct: 416 GSVGVITPETSVQIRDDLGKVLTHVDANQKLISGKYGARGVIHIRGPQVMKGYYKNPETT 475
Query: 317 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 376
+ L +DGW++TGDIG + L + GRAKDT+VL GENVEP+ +E+
Sbjct: 476 AKVL-KDGWMDTGDIGMFNFKKT----------LTITGRAKDTVVLLGGENVEPVPIEDK 524
Query: 377 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYG 435
S I Q++VIGQDQ+ GA++VPD +++ AK I D +L K +
Sbjct: 525 LTESPYIAQVMVIGQDQKNLGALVVPDFDKLTEWAKENGISETDKQKLIENPKVLDFYKK 584
Query: 436 ELRKW-TSKCSF----QIGPIHVVDEPFTV 460
E++ +K F Q+ P ++ + F V
Sbjct: 585 EIKALNNTKTGFKSFEQVTPFILITKSFEV 614
>gi|359684409|ref|ZP_09254410.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
gi|421112436|ref|ZP_15572893.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410802081|gb|EKS08242.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|456875451|gb|EMF90652.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 683
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 240/485 (49%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVP-----AENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + + + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMVHQMVHVVPMLLTNTKPTDSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++ R+
Sbjct: 240 YGAISRGIQTYYTKVTDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKF 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ---------PSYLVALIDWLWARIICAIL- 197
+ + S Y A +R G + + S +V L+ + AIL
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNILKSVAIGTKSLIVLLLTGPFTLSAMAILA 359
Query: 198 -------------WPLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
WP ++A + +V KI++A G K +SGGG+L H
Sbjct: 360 YLTLPTYGVRLPGWPFLMIAGLGLIFNAKTLDAIVLSKIRAATGGRLKGSLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
E+L G KG+V V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDKFEILAGKLGQKGVVFVKGPQVMKGYYKNPEVTKKTI-ADGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQD++ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E++ + K I + +L K K I E+R + S K F Q+ I +
Sbjct: 589 PDMEQLTLWCKENEIDSSKIDDLIKNPKVIDFYKKEVRNYNSTKTGFKSFEQVQHIILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|410448177|ref|ZP_11302263.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|410018076|gb|EKO80122.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
Length = 683
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 240/485 (49%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVP-----AENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + + + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMVHQMVHVVPMLLTNTKPTDSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++ R+
Sbjct: 240 YGAISRGIQTYYTKVTDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKF 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ---------PSYLVALIDWLWARIICAIL- 197
+ + S Y A +R G + + S +V L+ + AIL
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNILKSVAIGTKSLIVLLLTGPFTLSAMAILA 359
Query: 198 -------------WPLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
WP ++A + +V KI++A G K +SGGG+L H
Sbjct: 360 YLTLPTYGVRFPGWPFLIIAGLGLIFNAKTLDAIVLSKIRAATGGRLKGSLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
E+L G KG+V V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDKFEILAGKLGQKGVVFVKGPQVMKGYYKNPEVTKKTI-ADGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQD++ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E++ + K I + +L K K I E+R + S K F Q+ I +
Sbjct: 589 PDMEQLTLWCKENEIDSSKIDDLIKNPKVIDFYKKEVRNYNSTKTGFKSFEQVQHIILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|359689644|ref|ZP_09259645.1| long-chain-fatty-acid CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749983|ref|ZP_13306271.1| AMP-binding enzyme domain protein [Leptospira licerasiae str.
MMD4847]
gi|418759344|ref|ZP_13315524.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384113835|gb|EIE00100.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274868|gb|EJZ42186.1| AMP-binding enzyme domain protein [Leptospira licerasiae str.
MMD4847]
Length = 679
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 231/450 (51%), Gaps = 82/450 (18%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
K LS+LP WHV+ER Y S G YT VR+L+ DL +P +M S P ++E +Y+G
Sbjct: 219 KLLSILPVWHVFERVVEYVCISIGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNG 278
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRI-----------YEG-------------- 168
I +I S + R L ++++ ++ K Y G
Sbjct: 279 IYTRINDPSQTP-AIRRGLFKLAYFFSDKKNAAVRFITGKEVDYHGRNPIFSFFYGILML 337
Query: 169 --------FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA-----------EKLVY 209
F LT +YL+A ++ ++ PL+++A +K+V
Sbjct: 338 FQLVLTGPFTLTVISSIAAYLLASTEF------SSLSLPLYIIAGLGVFFNSATLDKIVL 391
Query: 210 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 268
KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV++ R ++G
Sbjct: 392 SKIRTATGGRLRASISGGGALPRHVDEFFNNIGINVLEGYGMTETSPVLSVRTFQKLIIG 451
Query: 269 SVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQVMQGYFKNPSAT 316
SVG + T ++I + + NEVL G KG+V V+G QVM+GYFKN AT
Sbjct: 452 SVGSIVPKTNLQIRN-DNNEVLTEVDENGKVIKGRLGRKGVVFVKGPQVMKGYFKNDEAT 510
Query: 317 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 376
+AL DGW+NTGD+G I H+ L L GRAKDT+VL GENVEP+ +E
Sbjct: 511 SKAL-VDGWMNTGDMGMINFKHT----------LTLTGRAKDTVVLLGGENVEPVPIENK 559
Query: 377 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYG 435
S+ I Q +VIGQDQ+ GAII+PD +++ AK + ++ L K + L
Sbjct: 560 LQESAYISQCMVIGQDQKNLGAIIIPDFDKLEEWAKENGVDTSNKDALIENPKVVDLYRK 619
Query: 436 ELRKW-TSKCSF----QIGPIHVVDEPFTV 460
E++ SK F Q+ P +V +PF V
Sbjct: 620 EIKALNNSKNGFKSFEQVNPFFLVSKPFEV 649
>gi|359729105|ref|ZP_09267801.1| long-chain-fatty-acid--CoA ligase [Leptospira weilii str.
2006001855]
gi|417780351|ref|ZP_12428115.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410779590|gb|EKR64204.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 683
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 234/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + + + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMVHQMVHVVPMLLTDIKTTDSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++ R+
Sbjct: 240 YGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKF 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLSGLEVDYENRNILKSIAIGTKSLIVLLLTGPFTLSAMTVLA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P+Y V L W + I L + +V KI++A G K +SGGG+L H
Sbjct: 360 YLALPTYGVHLPSWFFLMIAGLGLIFNAKTLDAVVLSKIRAATGGRLKGSLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDKFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQD++ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + + K I + EL K K I E+R + S K F Q+ I +
Sbjct: 589 PDMEHLTLWCKENGIDSSKIDELIKNPKVIEFYKKEVRNYNSTKTGFKSFEQVQHIILTK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|456864747|gb|EMF83139.1| AMP-binding enzyme [Leptospira weilii serovar Topaz str. LT2116]
Length = 683
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 233/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMPIPKMTNFQ--IRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP M + + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLTHSNMVHQMVHVVPMLLTDIKTTDSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++ R+
Sbjct: 240 YGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKF 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLSGLEVDYENRNILKSIAIGTKSLIVLLLTGPFTLSAMTILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P+Y + L W + I L + +V KI++A G KA +SGGG+L H
Sbjct: 360 YLALPTYGIRLPSWFFLMIAGLGLIFNAKTLDAVVLSKIRAATGGRLKASLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDKFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQD++ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + + K I + EL K K I E+R + S K F Q+ I +
Sbjct: 589 PDMEHLTLWCKENGIDSSKIDELIKNPKVIEFYKKEVRNYNSTKTGFKSFEQVQHIILTK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|374584914|ref|ZP_09658006.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373873775|gb|EHQ05769.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 640
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 201/350 (57%), Gaps = 23/350 (6%)
Query: 67 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 126
VP D+ LS+LP WH++ER RG Y+ VR+L+DD++ P +M S P +
Sbjct: 224 VPIRTDDRVLSILPVWHIFERVFEMIALGRGCCTYYSNVRSLRDDMKNVAPTFMASAPRL 283
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
+E++Y+GI + +S RR + + +S + R +G L + S +++
Sbjct: 284 WESVYAGILTNLEKASPVRRGLFALTLSVSRRFRGALRFLKGNELDITGR--SSFLSMFR 341
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQ 245
LW+ + +L L +++V KKI++A G + G SGGG+LP H+DLF+ G+ V
Sbjct: 342 ALWSIVEVLLLAVPFFLLDRIVLKKIRAATGGALRGTCSGGGALPYHVDLFFNDAGIPVL 401
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---------PAGSKG 296
GYGLTE+SPV++ R P V G+VG T+++I D T E+L G KG
Sbjct: 402 EGYGLTETSPVLSVRTPDLLVPGTVGPIYPDTDLRITDLNTGELLFTTEAGGPKRRGVKG 461
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+ VRG Q+M+GY+K+ +AT + L +DGW NTGD+G + L + GR+
Sbjct: 462 EIHVRGPQIMKGYYKDQAATDKVL-KDGWFNTGDLGMMT----------YNDCLKITGRS 510
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 406
K+TIVL GENVEP+ +E L+S IRQ++V+GQD++ A+IVP+ E+
Sbjct: 511 KETIVLLNGENVEPVPIENTLLQSPYIRQLIVVGQDKKYLTALIVPEIEK 560
>gi|410938814|ref|ZP_11370654.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410786015|gb|EKR74966.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 683
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 236/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLLTDIKPTDSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ RR+
Sbjct: 240 YGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPPIRRI 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + ++
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYEKRNILKSLAIGIKSLIILLLTGPFTLSAISILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P Y V L +WL+ + L + +V KI+ A G KA +SGGG+L H
Sbjct: 360 YLTLPVYRVHLPNWLFFSLAGLGLVFNAKTLDTIVLSKIRGATGGRLKASLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDQFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTII-DGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + + K I + E+ K K I E+R + S K F Q+ I +
Sbjct: 589 PDIEHLAVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRNYNSTKTGFKSFEQVQHIILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|294827577|ref|NP_710287.2| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|386072580|ref|YP_005986897.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|293385420|gb|AAN47305.2| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|353456369|gb|AER00914.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 683
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 237/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I +I RRV
Sbjct: 240 YGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKINDPKQTPPIRRV 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H
Sbjct: 360 YLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + + K I + E+ K K I E+R + S K F Q+ + +
Sbjct: 589 PDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|408671205|ref|YP_006871276.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
gi|407241027|gb|AFT83910.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
Length = 645
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 207/350 (59%), Gaps = 18/350 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +PA + G +S+LP WH +ERAC Y + +G+ + Y+ L D
Sbjct: 210 FQLDRLYDYLPAIKPGKIMISILPLWHSFERACEYIVALKGVAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P +ISVP ++E + GI K++ + S +++V ++I Y + GF
Sbjct: 270 LNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKIGIIYAKLNEKFLGFSPV-- 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKPNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ PV++ RR V +VG + E K+V + +VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPVLSVRRLKGPVARTVGPILPDVEYKVVGID-GKVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + V+ Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVKSPQIMSGYFKDKAKTNEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPN 545
>gi|386853996|ref|YP_006203281.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
gi|365194030|gb|AEW68928.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
Length = 645
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 207/350 (59%), Gaps = 18/350 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +PA + G +S+LP WH +ERAC Y + +G+ + Y+ L D
Sbjct: 210 FQLDRLYDYLPAIKPGKIMISILPLWHSFERACEYIVALKGVAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P +ISVP ++E + GI K++ + S +++V ++I Y + GF
Sbjct: 270 LNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKIGIIYAKLNEKFLGFSPV-- 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKPNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ PV++ RR V +VG + E K+V + +VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPVLSVRRLKGPVARTVGPILPDVEYKVVGID-GKVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + V+ Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVKSPQIMSGYFKDKAKTNEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPN 545
>gi|390940643|ref|YP_006404380.1| AMP-forming long-chain acyl-CoA synthetase [Sulfurospirillum
barnesii SES-3]
gi|390193750|gb|AFL68805.1| AMP-forming long-chain acyl-CoA synthetase [Sulfurospirillum
barnesii SES-3]
Length = 629
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 224/412 (54%), Gaps = 24/412 (5%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
+ +R + ++ ++ D ++S+LP WH++ERA Y SRG +Y++++ DL++Y+P
Sbjct: 205 YNVREIPPLIALQSTDMWVSILPSWHIFERAAEYVALSRGCCTVYSSIKTFAADLEQYKP 264
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF--CLTRNQ 175
+ +VP ++E++Y+ I + + A + + + LI IS AY KR+ + C
Sbjct: 265 TIVATVPRLWESMYTKINTTLEKTDAKKAKIFKKLIAISIAYKRAKRVIDDELPCF---- 320
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL 235
K+PS+ V + + A + C L+P + +A+K + + G + VSGGG+LP +D
Sbjct: 321 KKPSFFVTCKEKIVAYLTCFFLYPFYSIAQKKLALVQEKFGGRLRLAVSGGGALPDFLDA 380
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
+ +AIG+++ YG++E +PVI+ R CN ++G P+ T +KIV E L AG
Sbjct: 381 WIDAIGIRIVNAYGMSECAPVISGRALQCNTFSTLGLPVKGTTLKIVTKE-GASLDAGEI 439
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G + V+G QVM GY+ NP ++ EDG+ TGD+G + G L++ GR
Sbjct: 440 GEIWVKGEQVMHGYYNNPEENAKSFSEDGFFKTGDLGKLT----------LKGELIITGR 489
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV--LMAAKR 413
+K+ IVL+ GENV+P +E I +++G ++ GA+IVPD E++ +A
Sbjct: 490 SKEIIVLANGENVDPSRIESTLSMLPFISDAILVGHTKKGLGALIVPDFEKLKEYVAVNF 549
Query: 414 LSIVHADASELSKEKTISLLYGEL-----RKWTSKCSFQIGPIHVVDEPFTV 460
+VH + + ++ L E+ +K K ++ IH +D+ FTV
Sbjct: 550 DKVVHTIEQVMEDQHIVAKLKSEMNAMLHQKEGFKPFEKLQNIHFLDQEFTV 601
>gi|374586232|ref|ZP_09659324.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875093|gb|EHQ07087.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 637
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 224/404 (55%), Gaps = 36/404 (8%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ +S+LP WHV+ER SRG+ YT +RN+++DL +P +M S P ++E +Y
Sbjct: 225 DRIVSILPVWHVFERVFEMLAISRGVCTYYTNIRNIREDLAIVRPTFMASAPRLWENIYQ 284
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
GI ++ A RR + A S + R L + + P + L W R+
Sbjct: 285 GILAKVEGGPAVRRALFNAAYYCSRNFKGAVRFLSSRQLDTHGRNPGLSLLLGLWNILRL 344
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
+ L P +LL + +V KKI++A G + + VSGGG+LP+H+D F+ IG+ V GYG+T
Sbjct: 345 F-SFLIP-NLLLDLIVLKKIRAATGGVLRGSVSGGGALPIHVDEFFNNIGIPVLEGYGMT 402
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---PAGS------KGIVKVRG 302
E+SPV+A R V G+VG +TE++++D +VL AGS KG + VRG
Sbjct: 403 ETSPVLAVRTYKRLVPGTVGPIWPNTELRLIDIANGQVLYSTEAGSPQRRGVKGEIHVRG 462
Query: 303 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
QVM+GY+KNP AT + L +DGW+NTGD+G I ++ C L + GR+K+T+VL
Sbjct: 463 PQVMKGYYKNPEATNKVL-KDGWMNTGDLGMITFNN-------C---LKIVGRSKETVVL 511
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 422
GENVEP+ +E L S I Q +V+GQD++ AI+VP + L A
Sbjct: 512 LGGENVEPVPIENRLLESPFIAQCMVVGQDKKYLSAIVVP-------SVDHLKDYGASTE 564
Query: 423 ELSKEKTIS-LLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+L+K + L+ E++K S K +I + ++ +PF V
Sbjct: 565 DLAKNAEVQRLIRDEVKKLISNEAGFKSFEKIVDVRILPKPFEV 608
>gi|417767938|ref|ZP_12415873.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400349383|gb|EJP01676.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
Length = 683
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 237/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ RRV
Sbjct: 240 YGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPPIRRV 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H
Sbjct: 360 YLTLPVYGIHLPNWLFFSLVGLGLIFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + + K I + E+ K K I E+R + S K F Q+ + +
Sbjct: 589 PDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|224534678|ref|ZP_03675250.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
gi|224513926|gb|EEF84248.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
Length = 645
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 219/383 (57%), Gaps = 18/383 (4%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P +ISVP ++E + GI K++ + S ++++ ++I Y K + GF
Sbjct: 270 LNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLKIGIVYAKLKEKFLGFSPV-- 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+P+ ++L L+ + +++P+ LL + LV+KKI+ A+G + + GVSGGG+L ++
Sbjct: 327 YKKPNLFISLFLKLFLFVGMILIFPVKLLGDILVFKKIKKALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRFKGPVARTVGPILPDVEYKVVGID-GKVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + V+ QVM GYFK+ + T + L EDGW N+GD+ + ++ + +
Sbjct: 446 EKGELWVKSPQVMSGYFKDKAKTSEVLTEDGWFNSGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GAIIVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAIIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGE 436
+ + +L + ++ LY +
Sbjct: 556 SGVSFSSRGDLLANEDVNKLYSK 578
>gi|216264227|ref|ZP_03436219.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
gi|215980700|gb|EEC21507.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
Length = 645
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 234/413 (56%), Gaps = 24/413 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P ++SVP ++E + GI K++ + S ++ V +++ Y K + G L+
Sbjct: 270 LNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPI 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKTKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 460
+ + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 556 SGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|456973085|gb|EMG13345.1| AMP-binding enzyme domain protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 568
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 237/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 65 LFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINE 124
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ RRV
Sbjct: 125 YGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPPIRRV 184
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 185 LFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILA 244
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H
Sbjct: 245 YLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSH 304
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 305 VDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHI 364
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 365 NDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 416
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIV
Sbjct: 417 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIV 473
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + + K I + E+ K K I E+R + S K F Q+ + +
Sbjct: 474 PDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAK 533
Query: 456 EPFTV 460
+PF V
Sbjct: 534 KPFEV 538
>gi|417763141|ref|ZP_12411124.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417770357|ref|ZP_12418267.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417774734|ref|ZP_12422598.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|417785227|ref|ZP_12432932.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|418669903|ref|ZP_13231277.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418674006|ref|ZP_13235316.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418680806|ref|ZP_13242044.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418689298|ref|ZP_13250420.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418698387|ref|ZP_13259364.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418705067|ref|ZP_13265932.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418707727|ref|ZP_13268547.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418713238|ref|ZP_13273965.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|418726949|ref|ZP_13285548.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|418730735|ref|ZP_13289211.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|421117442|ref|ZP_15577805.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421123073|ref|ZP_15583355.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|400327456|gb|EJO79707.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400361443|gb|EJP17409.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409941197|gb|EKN86831.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409947911|gb|EKN97905.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409952016|gb|EKO06530.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|409959696|gb|EKO23462.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410011153|gb|EKO69281.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410343817|gb|EKO95012.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410575576|gb|EKQ38594.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410578989|gb|EKQ46840.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410754193|gb|EKR15848.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410762530|gb|EKR28691.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410764918|gb|EKR35620.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410772148|gb|EKR47342.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410774297|gb|EKR54305.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|410790321|gb|EKR84015.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|455666916|gb|EMF32288.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
gi|456824239|gb|EMF72676.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 683
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 237/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ RRV
Sbjct: 240 YGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPPIRRV 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H
Sbjct: 360 YLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + + K I + E+ K K I E+R + S K F Q+ + +
Sbjct: 589 PDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|224532749|ref|ZP_03673366.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
gi|224512367|gb|EEF82751.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
Length = 645
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 234/413 (56%), Gaps = 24/413 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P ++SVP ++E + GI K++ + S ++ V +++ Y K + G L+
Sbjct: 270 LNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPI 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 460
+ + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 556 SGVSFSSISDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|218249826|ref|YP_002375101.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
gi|218165014|gb|ACK75075.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
Length = 645
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 234/413 (56%), Gaps = 24/413 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P ++SVP ++E + GI K++ + S ++ V +++ Y K + G L+
Sbjct: 270 LNPQVIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPI 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 460
+ + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 556 SGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|15594938|ref|NP_212727.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|195941726|ref|ZP_03087108.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|223888827|ref|ZP_03623418.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|225549652|ref|ZP_03770618.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
gi|387826230|ref|YP_005805683.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
gi|2688524|gb|AAC66957.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|223885643|gb|EEF56742.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|225369929|gb|EEG99376.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
gi|312147979|gb|ADQ30638.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
Length = 645
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 234/413 (56%), Gaps = 24/413 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P ++SVP ++E + GI K++ + S ++ V +++ Y K + G L+
Sbjct: 270 LNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPI 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 460
+ + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 556 SGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|221218169|ref|ZP_03589635.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|226321899|ref|ZP_03797425.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
gi|221192117|gb|EEE18338.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|226233088|gb|EEH31841.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
Length = 645
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 234/413 (56%), Gaps = 24/413 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P ++SVP ++E + GI K++ + S ++ V +++ Y K + G L+
Sbjct: 270 LNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPI 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 460
+ + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 556 SGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|455790029|gb|EMF41919.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 683
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 237/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ RRV
Sbjct: 240 YGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPPIRRV 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H
Sbjct: 360 YLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + + K I + E+ K K I E+R + S K F Q+ + +
Sbjct: 589 PDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|421124587|ref|ZP_15584844.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421133743|ref|ZP_15593889.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410022188|gb|EKO88967.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410437718|gb|EKP86817.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 683
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 237/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ RRV
Sbjct: 240 YGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPPIRRV 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H
Sbjct: 360 YLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + + K I + E+ K K I E+R + S K F Q+ + +
Sbjct: 589 PDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|51598846|ref|YP_073034.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
gi|51573417|gb|AAU07442.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
Length = 645
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 207/350 (59%), Gaps = 18/350 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +PA + G +S+LP WH +ERAC Y + +G+ + Y+ L D
Sbjct: 210 FQLDRLYDYLPAIKPGKIMISILPLWHSFERACEYIVALKGVAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P +ISVP ++E + GI K++ + S +++V ++I Y + GF
Sbjct: 270 LNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKIGIIYAKLNEKFLGFSPV-- 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
++P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YRKPNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++AIG+KV GYGLTE+ PV++ RR V +VG + E K+V + +VLP G
Sbjct: 387 DYFFKAIGIKVLEGYGLTETGPVLSVRRLKGPVARTVGPILPDVEYKVVGID-GKVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + V+ Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVKSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPN 545
>gi|421099382|ref|ZP_15560036.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410797584|gb|EKR99689.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 683
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 233/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVP-----AENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + + + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMVHQMVHVVPMLLTDTKPTDSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++ R+
Sbjct: 240 YGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKF 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNILKSIAIGTKSLIVLLLTGPFTLSAMAILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P+Y V L W + I L + +V KI++A G K +SGGG+L H
Sbjct: 360 YLALPTYGVRLPSWFFFMIAGLGLVFNAKTLDAVVLSKIRAATGGRLKGSLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDKFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQD++ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + K I + EL K K I E+R + S K F Q+ + +
Sbjct: 589 PDMEHLTFWCKENGIDSSKIDELIKNPKVIEFYKKEVRNYNSTKTGFKSFEQVQHVILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|216263481|ref|ZP_03435476.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii ACA-1]
gi|215980325|gb|EEC21146.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii ACA-1]
Length = 645
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 216/383 (56%), Gaps = 18/383 (4%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFSL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P +ISVP ++E + GI K++ + S ++++ +RI Y K GF
Sbjct: 270 LNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLRIGIVYAKLKEKILGFSPV-- 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+P+ ++L ++ + ++ P+ LL + LV+KKI+ A+G + + GVSGGG+L ++
Sbjct: 327 YKKPNLFISLFSKIFLFVGIVLILPIKLLGDILVFKKIKKALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +VL G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGVD-EKVLSYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GAIIVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAIIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGE 436
+ + +L + ++ LY +
Sbjct: 556 SGVSFSSRGDLLANEDVNKLYSK 578
>gi|219684359|ref|ZP_03539303.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
gi|219672348|gb|EED29401.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
Length = 645
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 220/383 (57%), Gaps = 18/383 (4%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +G+ + Y+ L D
Sbjct: 210 FQLDRLYDYLPEIKPGKIMISILPLWHSFERACEYIVALKGVAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P +ISVP ++E + GI K++ + S +++V +++ Y + GF
Sbjct: 270 LNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKVGIIYAKLNEKFLGFSPV-- 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKPNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGID-GKVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGWL TGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWLKTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERILGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGE 436
+ + S+L + ++ LY +
Sbjct: 556 NGVSFSSRSDLLVNEDVNRLYSK 578
>gi|219685238|ref|ZP_03540058.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
gi|219673334|gb|EED30353.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
Length = 645
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 220/383 (57%), Gaps = 18/383 (4%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +G+ + Y+ L D
Sbjct: 210 FQLDRLYDYLPEIKPGKIMISILPLWHSFERACEYIVALKGVTIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P +ISVP ++E + GI K++ + S +++V +++ Y + GF
Sbjct: 270 LNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKVGIIYAKLNEKFLGFSPV-- 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKPNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGID-GKVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGWL TGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWLKTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERILGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGE 436
+ + S+L + ++ LY +
Sbjct: 556 NGVSFSSRSDLLVNEDVNKLYSK 578
>gi|225552232|ref|ZP_03773172.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
gi|225371230|gb|EEH00660.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
Length = 645
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 233/413 (56%), Gaps = 24/413 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P +ISVP ++E + GI K++ + S ++ V +++ Y K + G L+
Sbjct: 270 LNPQMIISVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPI 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRFKGPVAKTVGPILPDVEYKVVGID-GRVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKVKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 460
+ + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 556 SGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|224533578|ref|ZP_03674167.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225548723|ref|ZP_03769770.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
gi|224513251|gb|EEF83613.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225370753|gb|EEH00189.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
Length = 645
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 233/413 (56%), Gaps = 24/413 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P ++SVP ++E + GI K++ + S ++ V +++ Y K + G L+
Sbjct: 270 LNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPI 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ ++L++L L+ I +++P+ LL + LV+KKI++A G + + GVSGGG+L ++
Sbjct: 327 YKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNAFGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 460
+ + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 556 SGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|111115421|ref|YP_710039.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|384207081|ref|YP_005592803.1| AMP-binding protein [Borrelia afzelii PKo]
gi|110890695|gb|ABH01863.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|342856965|gb|AEL69813.1| AMP-binding enzyme family protein [Borrelia afzelii PKo]
Length = 645
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 216/383 (56%), Gaps = 18/383 (4%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P +ISVP ++E + GI K++ + S ++++ +RI Y K GF
Sbjct: 270 LNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLRIGIVYAKLKEKILGFSPV-- 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+P+ ++L ++ + ++ P+ LL + LV+KKI+ A+G + + GVSGGG+L ++
Sbjct: 327 YKKPNLFISLFSKIFLFVGIVLILPIKLLGDILVFKKIKKALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +VL G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGVD-GKVLSYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GAIIVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAIIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGE 436
+ + +L + ++ LY +
Sbjct: 556 SGVSFSSRGDLLANEDVNKLYSK 578
>gi|410679373|ref|YP_006931775.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
gi|408536761|gb|AFU74892.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
Length = 651
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 216/383 (56%), Gaps = 18/383 (4%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 216 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 275
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P +ISVP ++E + GI K++ + S ++++ +RI Y K GF
Sbjct: 276 LNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLRIGIVYAKLKEKILGFSPV-- 332
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+P+ ++L ++ + ++ P+ LL + LV+KKI+ A+G + + GVSGGG+L ++
Sbjct: 333 YKKPNLFISLFSKIFLFVGIVLILPIKLLGDILVFKKIKKALGQNFEFGVSGGGALVDYV 392
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +VL G
Sbjct: 393 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGVD-GKVLSYG 451
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 452 EKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 501
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GAIIVP+ + + A
Sbjct: 502 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAIIVPNFDNLEKWANS 561
Query: 414 LSIVHADASELSKEKTISLLYGE 436
+ + +L + ++ LY +
Sbjct: 562 SGVSFSSRGDLLANEDVNKLYSK 584
>gi|445061913|ref|ZP_21374382.1| long-chain acyl-CoA synthetase [Brachyspira hampsonii 30599]
gi|444506705|gb|ELV06998.1| long-chain acyl-CoA synthetase [Brachyspira hampsonii 30599]
Length = 625
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 213/413 (51%), Gaps = 34/413 (8%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
IR L DI+ + G+K L++LP WH+YER Y G T R LK+D +P
Sbjct: 204 NIRVLPDIIKLQPGEKLLTILPIWHIYERTISYVTAITGCFTAITNKRYLKNDFTEEKPD 263
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT-----R 173
ISVP ++ +Y+ + K I R +A+ I+ S Y R +
Sbjct: 264 IFISVPAIWVNIYNTVMKNIDRKGTIARNLAKFFIKRSLKYIRSLRFQNDLVYLLGDEYK 323
Query: 174 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
+ K+ Y + + D L+ H +A+K+VY KI G + +SGGG+LPM+
Sbjct: 324 SHKKSEYSIGIFDPLY-----------HKMAKKMVYSKILELTGGKMRLTISGGGALPMY 372
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
I+ F EA+G+ + VG+G+TE+SPV+ R P N G+ G PI +I+I D E N +
Sbjct: 373 IEDFVEAVGINLVVGWGITETSPVVTLRSPYKNYRGTCGAPIPEVKIEIRDKEGN-ICKD 431
Query: 293 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 352
G G+ ++G + + Y+K+P TKQA DG+ N+GD+G G +VL
Sbjct: 432 GVMGVCYIKGPNIFKEYYKDPELTKQA-KVDGFFNSGDLGAYTQQ----------GEIVL 480
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 412
GRAK+TIVL TGENVEP +E AL S I QI++IGQD+ GAIIV +KE +
Sbjct: 481 TGRAKETIVLLTGENVEPQPIENKALESPYIHQIMLIGQDKASTGAIIVINKENIKEYFD 540
Query: 413 RLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 460
+ I + + + S L+ EL + K F+ I + + DE FT+
Sbjct: 541 KHKISYDENTLSSSRDVYKLIREELDNLINYKNGFRPYEAIAKMIITDEEFTI 593
>gi|398340726|ref|ZP_10525429.1| long-chain-fatty-acid CoA ligase [Leptospira kirschneri serovar Bim
str. 1051]
gi|418678481|ref|ZP_13239755.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|421088407|ref|ZP_15549232.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|421129505|ref|ZP_15589705.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|400321671|gb|EJO69531.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410003038|gb|EKO53487.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410358880|gb|EKP05989.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 683
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 241/487 (49%), Gaps = 77/487 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLLTDIKPTDSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSAARRV 147
Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ + RR+
Sbjct: 240 YGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPTIRRI 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA--- 204
+ + S Y A +R G L + + + L +L+ + + II + P L A
Sbjct: 300 LFKLAYFFSKHYNASRRFLNG--LEVDYENRNILKSLVIGIKSLIILLLTGPFTLSAISI 357
Query: 205 ---------------------------------EKLVYKKIQSAIGIS-KAGVSGGGSLP 230
+ +V KI++A G KA +SGGG+L
Sbjct: 358 LAYLTIPVYGAHLPNWIFFSLAGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQ 417
Query: 231 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN--- 287
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 418 SHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLT 477
Query: 288 ------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 339
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 478 HINDQFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----- 531
Query: 340 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 399
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAI
Sbjct: 532 -----NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAI 586
Query: 400 IVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHV 453
IVPD E + + K I + E+ K K I E+R + S K F Q+ + +
Sbjct: 587 IVPDIEHLSVWCKENGIDPSKTDEIIKNPKVIDFYKKEVRNYNSTKTGFKSFEQVQHVIL 646
Query: 454 VDEPFTV 460
+PF V
Sbjct: 647 AKKPFEV 653
>gi|226320819|ref|ZP_03796372.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
gi|226233761|gb|EEH32489.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
Length = 645
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 233/413 (56%), Gaps = 24/413 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P ++SVP ++E + GI K++ + S ++ V +++ Y K + G L+
Sbjct: 270 LNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPI 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + VLP G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+I P+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIAPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 460
+ + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 556 SGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|429124895|ref|ZP_19185427.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
hampsonii 30446]
gi|426279278|gb|EKV56304.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
hampsonii 30446]
Length = 625
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 214/413 (51%), Gaps = 34/413 (8%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
IR L DI+ + G+K L++LP WH+YER Y G T R LK+D +P
Sbjct: 204 NIRVLPDIIKLQPGEKLLTILPIWHIYERTISYVTAITGCFTAITNKRYLKNDFTEEKPD 263
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL-----TR 173
ISVP ++ +Y+ + K I R +A+ I+ S Y R ++
Sbjct: 264 IFISVPAIWVNIYNTVMKNIDRKGTIARNLAKFFIKRSLKYIRSLRFQNDLVYLLGEESK 323
Query: 174 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
K+ Y + + D ++ H +A+K+VY KI G + +SGGG+LPM+
Sbjct: 324 AHKKSEYSIGMFDPIY-----------HKMAKKMVYSKILELTGGKMRLTISGGGALPMY 372
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
I+ F EA+G+ + VG+G+TE+SPV+ R P N G+ G PI +I+I D E N +
Sbjct: 373 IEDFVEAVGINLVVGWGITETSPVVTLRSPYKNYRGTCGAPIPEVKIEIRDKEGN-ICKD 431
Query: 293 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 352
G G+ ++G + + Y+K+P TKQA DG+ N+GD+G G +VL
Sbjct: 432 GVMGVCYIKGPNIFKEYYKDPELTKQA-KVDGFFNSGDLGAYTQQ----------GEIVL 480
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 412
GRAK+TIVL TGENVEP +E AL S I QI++IGQD+ GAIIV +KE +
Sbjct: 481 TGRAKETIVLLTGENVEPQPIENKALESPYIYQIMLIGQDKASTGAIIVINKENIKEYFD 540
Query: 413 RLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 460
+ I + + + S + L+ EL + K F+ I + + DE FT+
Sbjct: 541 KHKISYDENTLSSSKDVYKLIREELDNLINYKNGFRPYEAIAKMIITDEEFTI 593
>gi|392403501|ref|YP_006440113.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390611455|gb|AFM12607.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 645
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 236/416 (56%), Gaps = 35/416 (8%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
Q+R++ +++ D L++LPPWHV+ R + G + YT ++++ DD++ +P
Sbjct: 216 QMRTIPEVLKIGPTDSGLTLLPPWHVFGRITEMMFIAIGASITYTDIKHIGDDMRSIKPT 275
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
Y+ +VP ++E +Y+ I + A + + + Y F + LT +K P
Sbjct: 276 YVPAVPRIWEGIYNKIIGNV--KKAGKEPIFNKFKAAALKYNHFVSM-----LTGKEKLP 328
Query: 179 --SYLVALIDWLWARIICAILWPL-HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+V+ I + AI+W + L + LV+KK+ +A G + KA +SGGG+LP +ID
Sbjct: 329 IGRNIVSAIGARIVGLFGAIVWFIPKKLGDILVFKKVLAATGGNLKASLSGGGALPSYID 388
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV--LPA 292
F+ AIGV++ GYGLTE+SPV++ RR + G+VG I HTE K++D E +V +P
Sbjct: 389 DFFRAIGVRILEGYGLTETSPVLSVRRMERLIPGTVGPLIAHTEYKLIDLEGRDVTRIP- 447
Query: 293 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 352
G+KG + VRG QVMQGY+KNP T L DGW NTGD+ + +HS G + +
Sbjct: 448 GAKGTLHVRGPQVMQGYYKNPKKTADVLTPDGWFNTGDL--VVFNHS--------GEISI 497
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI----GQDQRRPGAIIVPDKEEVL 408
GR+KDT+VL GENVEP +EE S I ++++ G+DQ+ GA+IVP+ + +
Sbjct: 498 VGRSKDTLVLVGGENVEPTPIEEKMKESEFIDHVMLVSRAFGEDQKVLGALIVPNADNLA 557
Query: 409 MAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPF 458
AK+ + V D + L K+ + +Y E+ K+ S+ F ++G ++ +PF
Sbjct: 558 DWAKK-NGVSGDFAALIKDPKVHAMYRHEINKYINSENGFKNFEKVGVFTLLKKPF 612
>gi|418693568|ref|ZP_13254618.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|421106608|ref|ZP_15567172.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|409958594|gb|EKO17485.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|410008074|gb|EKO61749.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 683
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 236/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLLTDIKPTDSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSAARRV 147
Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ + RR+
Sbjct: 240 YGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPTIRRI 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNIFKSLVIGIKSLIILLLTGPFTLSAISILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P Y L +W++ + L + +V KI++A G KA +SGGG+L H
Sbjct: 360 YLTLPVYGARLPNWIFFSLAGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDQFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + + K I + E+ K K I E+R + S K F Q+ + +
Sbjct: 589 PDIEHLSVWCKENGIDPSKTDEIIKNPKVIDFYKKEVRNYNSTKTGFKSFEQVQHVILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|45656005|ref|YP_000091.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599238|gb|AAS68728.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 685
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 236/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 182 LFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINE 241
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y S GI+ YT V +L++DL + +P +M P V+E +Y+ I ++ RRV
Sbjct: 242 YGAISSGIQTYYTKVADLRNDLAKAKPSFMAFAPRVWENVYANIYNKVNDPKQTPPIRRV 301
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 302 LFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILA 361
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H
Sbjct: 362 YLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSH 421
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 422 VDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHI 481
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 482 NDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 533
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIV
Sbjct: 534 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIV 590
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + + K I + E+ K K I E+R + S K F Q+ + +
Sbjct: 591 PDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAK 650
Query: 456 EPFTV 460
+PF V
Sbjct: 651 KPFEV 655
>gi|256829470|ref|YP_003158198.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
gi|256578646|gb|ACU89782.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
Length = 629
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 229/413 (55%), Gaps = 28/413 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
+R+L ++ ++ D ++S+LP WH++ER Y + G L+Y+++R DL+ Y+P
Sbjct: 206 NVRTLPPLIRLQSDDVWVSILPTWHIFERTAEYIGIANGSCLVYSSIRTFAADLESYKPT 265
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ--- 175
+ +VP ++E+LYS I + + + L+R+S AY R+ R+Q
Sbjct: 266 LVATVPRIWESLYSKITTGLKKKDPKKAKIFNLLVRVSAAYRRNARVL------RDQLPV 319
Query: 176 -KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHID 234
++ S V D + A + L+ +LLA+K + + G K +SGGGSLP ++D
Sbjct: 320 FQKKSLPVRFADKVQALVSNIFLFLPNLLAKKKLVLVQEKFGGRLKGAISGGGSLPPYLD 379
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
+ +AIG+++ YG+TE SP IA R C+V G++G P+ TE++IV+ + E +P G
Sbjct: 380 EWIDAIGIRIINAYGMTECSPGIAGRGFNCDVFGTIGPPVGETELRIVN-DQGEPVPNGI 438
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+G ++VRG+QV +GY+KN A A DG+L TGD+G + G LV+ G
Sbjct: 439 EGEIQVRGAQVFKGYYKNDEANAGAFTSDGFLRTGDLGRLT----------LTGELVITG 488
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV--LMAAK 412
RAK+ IVL++GENV+P +E ++ V++GQD++ GA+IVPD E++ + K
Sbjct: 489 RAKEIIVLASGENVDPTNIEATLSMFPFVQDAVLVGQDKKGLGALIVPDLEKLREFVLEK 548
Query: 413 RLSIVHADASELSKEKTISLLYGELRK-WTSKCSF----QIGPIHVVDEPFTV 460
++ L ++ + L E+ K +K F ++ IH +D+ FT+
Sbjct: 549 YNQVLEETEGALRDKQLLDRLREEMNKLLNAKKGFKPYEKLQNIHFLDKEFTL 601
>gi|421087474|ref|ZP_15548310.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421104138|ref|ZP_15564733.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410365590|gb|EKP20983.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410429723|gb|EKP74098.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
Length = 683
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 236/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y S GI+ YT V +L++DL + +P +M P V+E +Y+ I ++ RRV
Sbjct: 240 YGAISSGIQTYYTKVADLRNDLAKAKPSFMAFAPRVWENVYANIYNKVNDPKQTPPIRRV 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H
Sbjct: 360 YLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + + K I + E+ K K I E+R + S K F Q+ + +
Sbjct: 589 PDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|257456081|ref|ZP_05621284.1| AMP-binding enzyme family protein [Treponema vincentii ATCC 35580]
gi|257446539|gb|EEV21579.1| AMP-binding enzyme family protein [Treponema vincentii ATCC 35580]
Length = 640
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 206/383 (53%), Gaps = 27/383 (7%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 116
Q+ L V G+K + +LP WH +ER C Y I + ++Y+ L D+ +
Sbjct: 217 QLDDLKTRVILHPGEKAIVVLPVWHSFERLCEYVILASAAGMVYSKPVGSILLADIAKTN 276
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG----FCLT 172
P SVP ++E++Y+G+ K + + ++ + + + + R G F
Sbjct: 277 PALFPSVPRIWESVYTGVFKAMKQAGGIKQKLFSFFVAVGLFHAHHARNVRGQNPHFAFY 336
Query: 173 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
+P +++ I +L + P + L LV+KKI++ +G + GVSGGG+LP
Sbjct: 337 TKITRP--IISFIPFLLSA-------PFYALGNVLVFKKIRTKLGTGFRQGVSGGGALPP 387
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
+ID F+ AIGV V GYGLTE++PV++ R V G++G P++ T++KIVD NE LP
Sbjct: 388 NIDAFFWAIGVSVTEGYGLTETAPVVSVRPLGHPVFGTIGKPLSCTKVKIVDDSGNE-LP 446
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
AG G V +RG+ VM+GY+K T +D+DGW ++GD+G + G L+
Sbjct: 447 AGKLGTVMIRGTSVMKGYYKRQDLTDAVIDKDGWFDSGDLGM----------KTIDGELI 496
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
L GR KDTIVL GEN+EP+ +E S I Q VV+GQDQR GA+IV D+ EV A
Sbjct: 497 LRGRKKDTIVLRGGENIEPVPIEMKLQESPFIAQAVVLGQDQRFLGALIVADEAEVKNYA 556
Query: 412 KRLSIVHADASELSKEKTISLLY 434
I A EL + I L+
Sbjct: 557 AEQGISAASFEELLAKPEIKKLF 579
>gi|374317585|ref|YP_005064013.1| AMP-forming long-chain acyl-CoA synthetase [Sphaerochaeta
pleomorpha str. Grapes]
gi|359353229|gb|AEV31003.1| AMP-forming long-chain acyl-CoA synthetase [Sphaerochaeta
pleomorpha str. Grapes]
Length = 639
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 213/383 (55%), Gaps = 22/383 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ L I+ G ++LS+LP WH +ER Y I S+ + Y+ L DLQ
Sbjct: 216 FQLEELPKIITRFAPGQRWLSVLPVWHSFERILQYTIVSQASAIAYSKPLGSILLADLQA 275
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
PH+M SVP ++E + +G+ + S + + + + ++ Y K + G +
Sbjct: 276 VNPHWMGSVPRIWEAVKAGVFGSMKNKSPVSQKLFKFFVSVANLYDTNKDLLVGDVPSFK 335
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
++ ID L + + +L+PL+ L + LVY K++ +G + AGVSGGGSL +
Sbjct: 336 KRN-----RFIDVLRSFLPTVLLFPLYKLGDHLVYAKVKEKLGKNFLAGVSGGGSLSESV 390
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F+ +IG+K+ GYGLTESSPVIA R ++ +V P+ +TE+KIVD N V P G
Sbjct: 391 DRFFSSIGIKLLDGYGLTESSPVIAVRYFDHSIKRTVS-PLGNTEVKIVDENGNSVAP-G 448
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG++ VRG QVM+GY+K P T + L DGWLNTGD+G I H G +
Sbjct: 449 VKGLLMVRGKQVMKGYYKRPDLTAKVLSPDGWLNTGDLG-IWTHD---------GQFSIA 498
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GRAKDTIVLS GEN+EP+ +E +I Q VV+GQD + GA++V +K+ V
Sbjct: 499 GRAKDTIVLSGGENLEPVPIEAKLCECEMIEQAVVVGQDMKYLGALVVLNKKLVEEYLTE 558
Query: 414 LSIVHADASELSKEKTISLLYGE 436
I + S LSK K ++ L E
Sbjct: 559 QHIPYLSDS-LSKMKEVNELIAE 580
>gi|456983873|gb|EMG20065.1| AMP-binding enzyme domain protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 485
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 221/443 (49%), Gaps = 66/443 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M P V+E++Y+
Sbjct: 24 DSMLSILPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMAFAPRVWESVYA 83
Query: 133 GIQKQIFTSSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------ 177
I ++ RRV+ + S Y A +R G + +
Sbjct: 84 NIYNKVNDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSL 143
Query: 178 ----------------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 215
P Y + L +WL+ ++ L + +V KI++A
Sbjct: 144 IVLLLTGPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAA 203
Query: 216 IGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 274
G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG +
Sbjct: 204 TGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLV 263
Query: 275 NHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDED 323
+E+ I D N EVL G KGIV V+G QVM+GY+KNP TK+ + D
Sbjct: 264 PKSELIIKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VD 322
Query: 324 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 383
GW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E S I
Sbjct: 323 GWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFI 372
Query: 384 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS 442
+Q +VIGQDQ+ GAIIVPD E + + K I + E+ K K I E+R + S
Sbjct: 373 KQSMVIGQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNS 432
Query: 443 -KCSF----QIGPIHVVDEPFTV 460
K F Q+ + + +PF V
Sbjct: 433 TKTGFKSFEQVQHVILAKKPFEV 455
>gi|384208744|ref|YP_005594464.1| long-chain acyl-CoA synthetase [Brachyspira intermedia PWS/A]
gi|343386394|gb|AEM21884.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
intermedia PWS/A]
Length = 625
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 216/413 (52%), Gaps = 34/413 (8%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
+R L DI+ + G+K L++LP WH+YER Y G T R LK+D +P
Sbjct: 204 NVRVLPDIIKLQPGEKLLTILPIWHIYERTISYVTAIIGCFTAITNKRYLKNDFTEERPD 263
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT-----R 173
ISVP ++ +Y+ + K I S R +A+ LI+ S Y R +
Sbjct: 264 IFISVPAIWVNIYNTVMKNIDRKSTFARNLAKFLIKRSIKYIRSVRFQNDLVYLLGDEHK 323
Query: 174 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
+ K+ Y + + D ++ H +A K+VY KI+ G + +SGGG+LPM+
Sbjct: 324 SDKKSEYSIGIFDPIY-----------HKMATKMVYSKIKELTGGKMRLTISGGGALPMY 372
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
I+ F EA+G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D E N +
Sbjct: 373 IEDFIEAVGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVKIEVRDKEGN-ICKD 431
Query: 293 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 352
G G+ ++G + + Y+K+P TKQA DG+ N+GD+G G +VL
Sbjct: 432 GVMGVCYIKGPNIFKEYYKDPELTKQA-KVDGFFNSGDLGTYTQQ----------GEIVL 480
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 412
GRAK+TIVL TGENVEP +E AL S I QI+++GQD+ GAIIV +KE +
Sbjct: 481 TGRAKETIVLLTGENVEPQPIENKALESPYISQIMLVGQDKASTGAIIVINKENIKEHFD 540
Query: 413 RLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 460
+ I + + + S + L+ EL + + F+ I + + DE FT+
Sbjct: 541 KQKISYDEKTLASSKDVYKLMREELDNLINYRNGFRPYEAIAKMIITDEEFTI 593
>gi|418720213|ref|ZP_13279411.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418735548|ref|ZP_13291958.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|421095199|ref|ZP_15555912.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410361909|gb|EKP12949.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410743191|gb|EKQ91934.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410748682|gb|EKR01576.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|456886947|gb|EMF98051.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200701203]
Length = 683
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 233/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVP-----AENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + + + +VP + + LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMVHQMIHVVPMLLTDTKPTNSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++ R+
Sbjct: 240 YGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKF 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRSILKSIAIGTKSLIVLLLTGPFTLSAIAILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P+Y V L W + I L + +V KI++A G K +SGGG+L H
Sbjct: 360 YLALPTYGVRLPGWFFFTIAGLGLIFNAKTLDAIVLSKIRAATGGRLKGSLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIKDENGNILTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+K+P TK+ + DGW+NTGDIG+I
Sbjct: 480 NDKFEVLAGKLGQKGIVFVKGPQVMKGYYKDPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQD++ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + K I + EL K K I E+R + S K F Q+ + +
Sbjct: 589 PDMEHLTFWCKENGIDSSKIDELIKNPKVIEFYKKEVRNYNSTKTGFKSFEQVQHVILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|398335133|ref|ZP_10519838.1| long-chain-fatty-acid CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 683
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 238/485 (49%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMIHVVPMLLTDIKPTDSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y S GI+ YT V +LK+DL + +P +M S P V+E++Y+GI ++ RR
Sbjct: 240 YGAISSGIQTYYTKVSDLKNDLAKAKPSFMASAPRVWESVYTGIYNKVNDPKQTPPLRRG 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ---------PSYLVALIDWLWARIICAILW 198
+ + S Y A +R G + + S +V L+ + AIL
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRNILKSLAIGTKSLIVLLLTGPFTVSAMAILA 359
Query: 199 PLHLLA-------------------------EKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
L L A + +V KI++A G K +SGGG+L H
Sbjct: 360 YLALPAYGVHLPNALFFTIAGLGLIFNAKTLDAIVLSKIRAATGGRLKGSMSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D +
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELMIKDDNGHVLTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KG+V V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 480 NDKYEVLAGKLGQKGVVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPYIKQSMVIGQDQKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD +++ K I + EL K K I E+R + S K F Q+ + +
Sbjct: 589 PDVDQLAAWCKENGIDPSKVEELIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILTK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|116326895|ref|YP_796615.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116329874|ref|YP_799592.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116119639|gb|ABJ77682.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116123563|gb|ABJ74834.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 683
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 233/485 (48%), Gaps = 73/485 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVP-----AENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + + + +VP + + LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMVHQMIHVVPMLLTDTKPTNSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRV 147
Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++ R+
Sbjct: 240 YGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKF 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------ 177
+ + S Y A +R G + +
Sbjct: 300 LFKLAYFFSKHYNASRRFLNGLEVDYENRSILKSIAIGTKSLIVLLLTGPFTLSAIAILA 359
Query: 178 ----PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
P+Y V L W + I L + +V KI++A G K +SGGG+L H
Sbjct: 360 YLALPTYGVRLPGWFFFTIAGLGLIFNAKTLDAIVLSKIRAATGGRLKGSLSGGGALQSH 419
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN----- 287
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 420 VDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIKDENGNILTHI 479
Query: 288 ----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
EVL G KGIV V+G QVM+GY+K+P TK+ + DGW+NTGDIG+I
Sbjct: 480 NDKFEVLAGKLGQKGIVFVKGPQVMKGYYKDPEVTKKTI-VDGWMNTGDIGFI------- 531
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQD++ GAIIV
Sbjct: 532 ---NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIV 588
Query: 402 PDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVD 455
PD E + K I + EL K K I E+R + S K F Q+ + +
Sbjct: 589 PDMEHLTFWCKENGIDSSKIDELIKNPKVIEFYKKEVRNYNSTKTGFKSFEQVQHVILAK 648
Query: 456 EPFTV 460
+PF V
Sbjct: 649 KPFEV 653
>gi|224531965|ref|ZP_03672597.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
gi|224511430|gb|EEF81836.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
Length = 645
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 215/383 (56%), Gaps = 18/383 (4%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYXKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P +ISVP ++E + GI K++ + S ++++ ++ Y FK + GF
Sbjct: 270 LNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLKTGIVYEKFKEKFLGFSPV-- 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ + + L L+ +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKSNLFIVLFSKLFLFGGIILIFPVKLLGDILVFKKIKNALGKNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + EVL G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGID-GEVLSYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDKAKTNEVLTEDGWFNTGDLVKLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLSKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGE 436
+ + +L + ++ LY +
Sbjct: 556 SGVSFSSRDDLLINEEVNKLYSK 578
>gi|387827494|ref|YP_005806776.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
gi|312149046|gb|ADQ29117.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
Length = 645
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 140/413 (33%), Positives = 232/413 (56%), Gaps = 24/413 (5%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D
Sbjct: 210 FQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLL 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
P ++SVP ++E + GI K++ + S ++ V +++ Y K + G L+
Sbjct: 270 LNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPI 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++
Sbjct: 327 YKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + VL G
Sbjct: 387 DYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLSYG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + +
Sbjct: 446 EKGELWVRSPQIMSGYFKDRAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+I P+ + + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIAPNFDNLEKWANS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 460
+ + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 556 SGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|398345147|ref|ZP_10529850.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 679
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 230/444 (51%), Gaps = 70/444 (15%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
+ LS+LP WHV+ER Y S G YT VR+L+ DL +P +M S P ++E +Y+G
Sbjct: 219 RLLSILPVWHVFERVVEYVCISIGATTYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNG 278
Query: 134 IQKQIFTSSAARRVVARALIRISFAYT----AFKRIYEGFCLTRNQKQPSY-----LVAL 184
I +I RAL ++++ ++ A R G + + + P ++ +
Sbjct: 279 IYTRI-NDPGQTPAFRRALFKLAYFFSDKNNASTRFLSGNEVDYHGRNPVKSFFYGILMV 337
Query: 185 IDWLWA-----RIICAIL-------------WPLHLLA-----------EKLVYKKIQSA 215
I +L II AI +PL++++ +K+V KI++A
Sbjct: 338 IQYLLTGPFTLSIITAIAAYTLAPTSFGYLSFPLYIVSGLALFLNSVALDKVVLSKIRTA 397
Query: 216 IGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 274
G + +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV++ R ++GSVG +
Sbjct: 398 TGGNLRASISGGGALPRHVDEFFNNIGINVLEGYGMTETSPVLSVRTFQKLIIGSVGSIV 457
Query: 275 NHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDE 322
T ++I + + N+VL G KG+V V+G QVM+GYFKN AT + L
Sbjct: 458 PKTRLQIRN-DNNDVLTEVDEGGHITQGKLGRKGVVFVKGPQVMKGYFKNDEATAKTL-V 515
Query: 323 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 382
DGW+NTGD+G I + L L GRAKDT+VL GENVEP+ +E S
Sbjct: 516 DGWMNTGDMGMINFKRT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESPY 565
Query: 383 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWT 441
I Q +VIGQDQ+ GAII+PD E++ AK I AD +L K I E++
Sbjct: 566 ISQCMVIGQDQKNLGAIIIPDFEKLGEWAKENGIDVADREKLIENPKIIDFYRKEIKNLN 625
Query: 442 S-----KCSFQIGPIHVVDEPFTV 460
+ K Q+ P ++ +PF V
Sbjct: 626 NAKNGFKSFEQVTPFFLITKPFEV 649
>gi|339498933|ref|YP_004696968.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
gi|338833282|gb|AEJ18460.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
Length = 637
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 205/380 (53%), Gaps = 23/380 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF--IFSRGIELMYTAVRNLKDDLQRYQ 116
Q+ SL I + GD +LS+LP WH +ER Y + GI + D + +
Sbjct: 215 QLPSLPLIADLKPGDVWLSVLPVWHSFERIMQYVAPCYYNGIAYSKPVGSIMLADFKAVR 274
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC--LTRN 174
P +M SVP ++E++ GI + I ++++ + + A+ + + G R
Sbjct: 275 PQWMASVPRIWESVRDGIYRNIRQHGGIKKILFTFFVSVGTAHAYMRNMTLGLLPNFHRR 334
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
+ ++ I W+ +L PL L LV+ K+++ +G KAG+SGGG+LP +
Sbjct: 335 MRALDTVLGCIPWM-------LLTPLKALGNVLVFNKLKALLGGRFKAGISGGGALPSQV 387
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F+ A+G+ + GYGLTE++PVIA RR G VG I +TE+KIVD + N LP G
Sbjct: 388 DKFFSAVGITLLEGYGLTETAPVIACRRMNNARPGCVGQIILNTEVKIVDEKGNS-LPPG 446
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
+G++ VRG QVM+GY+K P T + L DGW NTGD+G + + + +
Sbjct: 447 HQGLIMVRGGQVMKGYYKKPDLTAKVLAPDGWFNTGDLGMLTYDNE----------IKIT 496
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GRAKDTIVL GENVEP +E S I Q +V+GQDQ+ A+IVP ++ ++ A+
Sbjct: 497 GRAKDTIVLRGGENVEPAPIEAKINESEWISQCMVVGQDQKYLAALIVPKQDALMAFAQE 556
Query: 414 LSIVHADASELSKEKTISLL 433
+I D L ++ I+ L
Sbjct: 557 NNIPIVDYETLLQQPEINEL 576
>gi|296125112|ref|YP_003632364.1| AMP-dependent synthetase/ligase [Brachyspira murdochii DSM 12563]
gi|296016928|gb|ADG70165.1| AMP-dependent synthetase and ligase [Brachyspira murdochii DSM
12563]
Length = 625
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 140/413 (33%), Positives = 216/413 (52%), Gaps = 34/413 (8%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
+R L DI+ + G+K L++LP WH+YER Y G T R LK+D +P
Sbjct: 204 NVRVLPDIIKLKAGEKLLTILPIWHIYERTISYVTAIIGCFTAITNKRYLKNDFTEEKPD 263
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL-----TR 173
ISVP ++ +Y+ + K I +A + + +I+ S +Y R R
Sbjct: 264 IFISVPAIWVNIYNTVMKNIDRKNAFLKKFIKFIIKRSISYIRSVRYQNDLVYLIGDEKR 323
Query: 174 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
K+ Y + + D L+ H +A+K+VY KI G + +SGGG+LPM+
Sbjct: 324 EDKKAEYSIGMFDPLF-----------HKMAKKMVYSKIMELTGGKIRLTISGGGALPMY 372
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
I+ F EA+G+ + VG+G+TE+SPV+ R P N G+ G PI +I+I D + N
Sbjct: 373 IEDFVEAVGINLVVGWGITETSPVVTLRSPYKNYRGTCGAPIPEVKIEIRDKDGNSC-KD 431
Query: 293 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 352
G G+ ++G + + Y+K+P T QA DG+ N+GD+G G +VL
Sbjct: 432 GVMGVCWIKGPNIFKEYYKDPELTAQA-KIDGFFNSGDLGTYTQE----------GEIVL 480
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 412
GRAK+TIVL TGENVEP +E A+ SS I QI+++GQD+ GAI+V +KE +
Sbjct: 481 TGRAKETIVLLTGENVEPQPIENKAMESSYISQIMLVGQDKASTGAIVVINKENIKYYFD 540
Query: 413 RLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 460
+ I + + + S ++ L+ EL + + K F+ I I + DE FT+
Sbjct: 541 KEKIAYDEKNLASSKEVYKLIREELDRLINYKNGFRPYEAIAKIIITDEEFTI 593
>gi|434381721|ref|YP_006703504.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli WesB]
gi|404430370|emb|CCG56416.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli WesB]
Length = 628
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 224/415 (53%), Gaps = 38/415 (9%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
+R L DI+ + G+K L++LP WH+YER Y G T R+LK+D +P
Sbjct: 209 NVRVLPDIIKLQRGEKLLTVLPIWHIYERTISYVTAIFGCFTAITNKRDLKNDFVEEKPD 268
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
ISVP ++ +Y+G+ K I AA +++ ++ I+ S Y RN +
Sbjct: 269 IFISVPAIWVNIYNGVMKNIDKKPAAVKMMVKSFIQGSIRY------------IRNLRYQ 316
Query: 179 SYLVALI--DWLWARIICAILWPL----HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
+ +V L+ + ++ I + PL H +A+KLVYKKI+ G + +SGGG+LPM
Sbjct: 317 NNMVYLLGDEKKESKKIEYDILPLDPMSHKMAQKLVYKKIKELTGGRLRLTISGGGALPM 376
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
+I+ F EA G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D N +
Sbjct: 377 YIEDFIEATGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN-ICK 435
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G G+ ++G + + Y+K+ T+QA +DG+ N+GD+G G +V
Sbjct: 436 DGELGVCYIKGPNIFKEYYKDKELTRQA-KKDGFFNSGDLGAYTKQ----------GEIV 484
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
L GRAK+TIVL TGENVEP +E A+ S I QI+++GQD+ GAI+V DK+ V
Sbjct: 485 LTGRAKETIVLLTGENVEPQPIENKAMESKYISQIMLVGQDKASTGAIVVIDKDNVKEFL 544
Query: 412 KRLSIVHADASELSKEK-TISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 460
+ I H D + + K + L+ EL R SK F+ I + + + FT+
Sbjct: 545 DKHKI-HYDENNMENSKDVVKLIKHELSRLVNSKNGFRPYETISKLIITSKDFTI 598
>gi|300871650|ref|YP_003786523.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
95/1000]
gi|300689351|gb|ADK32022.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
95/1000]
Length = 628
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 224/415 (53%), Gaps = 38/415 (9%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
+R L DI+ + G+K L++LP WH+YER Y G T R+LK+D +P
Sbjct: 209 NVRVLPDIIKLQRGEKLLTVLPIWHIYERTISYVTAIFGCFTAITNKRDLKNDFVEEKPD 268
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
ISVP ++ +Y+G+ K I AA +++ ++ I+ S Y RN +
Sbjct: 269 IFISVPAIWVNIYNGVMKNIDKKPAAVKMMVKSFIQGSVRY------------IRNLRYQ 316
Query: 179 SYLVALI--DWLWARIICAILWPL----HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
+ +V L+ + ++ I + PL H +A+KLVYKKI+ G + +SGGG+LPM
Sbjct: 317 NNMVYLLGDEKKESKKIEYDILPLDPMSHKMAQKLVYKKIKELTGGRLRLTISGGGALPM 376
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
+I+ F EA G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D N +
Sbjct: 377 YIEDFIEATGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN-ICK 435
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G G+ ++G + + Y+K+ T+QA +DG+ N+GD+G G +V
Sbjct: 436 DGELGVCYIKGPNIFKEYYKDKELTRQA-KKDGFFNSGDLGAYTKQ----------GEIV 484
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
L GRAK+TIVL TGENVEP +E A+ S I QI+++GQD+ GAI+V DK+ V
Sbjct: 485 LTGRAKETIVLLTGENVEPQPIENKAMESKYISQIMLVGQDKASTGAIVVIDKDNVKEFL 544
Query: 412 KRLSIVHADASELSKEK-TISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 460
+ I H D + + K + L+ EL R SK F+ I + + + FT+
Sbjct: 545 DKHKI-HYDENNMENSKDVVKLIKHELSRLVNSKNGFRPYETISKLIITSKDFTI 598
>gi|431807605|ref|YP_007234503.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
P43/6/78]
gi|430780964|gb|AGA66248.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
P43/6/78]
Length = 623
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 224/415 (53%), Gaps = 38/415 (9%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
+R L DI+ + G+K L++LP WH+YER Y G T R+LK+D +P
Sbjct: 204 NVRVLPDIIKLQRGEKLLTVLPIWHIYERTISYVTAIFGCFTAITNKRDLKNDFVEEKPD 263
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
ISVP ++ +Y+G+ K I AA +++ ++ I+ S Y RN +
Sbjct: 264 IFISVPAIWVNIYNGVMKNIDKKPAAVKMMVKSFIQGSVRY------------IRNLRYQ 311
Query: 179 SYLVALI--DWLWARIICAILWPL----HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
+ +V L+ + ++ I + PL H +A+KLVYKKI+ G + +SGGG+LPM
Sbjct: 312 NNMVYLLGDEKKESKKIEYDILPLDPMSHKMAQKLVYKKIKELTGGRLRLTISGGGALPM 371
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
+I+ F EA G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D N +
Sbjct: 372 YIEDFIEATGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN-ICK 430
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G G+ ++G + + Y+K+ T+QA +DG+ N+GD+G G +V
Sbjct: 431 DGELGVCYIKGPNIFKEYYKDKELTRQA-KKDGFFNSGDLGAYTKQ----------GEIV 479
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
L GRAK+TIVL TGENVEP +E A+ S I QI+++GQD+ GAI+V DK+ V
Sbjct: 480 LTGRAKETIVLLTGENVEPQPIENKAMESKYISQIMLVGQDKASTGAIVVIDKDNVKEFL 539
Query: 412 KRLSIVHADASELSKEK-TISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 460
+ I H D + + K + L+ EL R SK F+ I + + + FT+
Sbjct: 540 DKHKI-HYDENNMENSKDVVKLIKHELSRLVNSKNGFRPYETISKLIITSKDFTI 593
>gi|384107780|ref|ZP_10008678.1| Long-chain acyl-CoA synthetases (AMP-forming) [Treponema sp. JC4]
gi|383870636|gb|EID86238.1| Long-chain acyl-CoA synthetases (AMP-forming) [Treponema sp. JC4]
Length = 692
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 207/386 (53%), Gaps = 28/386 (7%)
Query: 56 TNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT--AVRNLKDD 111
NF Q+ +L +I D+ + +LP WHVY+RA +++ L Y+ L D
Sbjct: 240 NNFLCQLPALSEIFDFHRADRSMCILPIWHVYQRAFEFYVMYFAGTLCYSKPVTSMLIQD 299
Query: 112 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 171
+ +P M VP V+E GI + I + A L ++ +A EG
Sbjct: 300 FAKVRPQLMPCVPRVWE----GIYQAISKKIKKQSKTAWLLFKLLSNASANALTLEGKIK 355
Query: 172 TRNQ--KQPSYLVALIDWLW-ARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGG 227
R+ KQP+YL + LW +C L PL L KL +K I+ G A G+SGGG
Sbjct: 356 GRHPLFKQPNYLQIGLSKLWYVPYVC--LLPLRALGNKLYFKNIREVTGGQFACGISGGG 413
Query: 228 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 287
LP +D FY +IG++V YGLTE++PV+A+R+ V+G++G + + ++KI+D E
Sbjct: 414 GLPPFLDRFYNSIGIRVVEAYGLTETAPVVASRKRFAPVMGTIGQALPYNQVKILDTEGK 473
Query: 288 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 347
+ P G KGI+ V+G VM+GY+K P T Q LD+DGW NTGD+ +
Sbjct: 474 PMAP-GQKGILYVKGENVMKGYYKQPELTAQVLDQDGWFNTGDLAM----------QTVK 522
Query: 348 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
G L+++GR KDTIVL +GENVEP +E S I +V+GQDQ GA+I+P E +
Sbjct: 523 GELMIKGRQKDTIVLKSGENVEPFPIEAKLAESPYITTAIVVGQDQNSLGALIIPAVEAI 582
Query: 408 LMAAKRLSIVHADASELSKEKTISLL 433
AAK+ S H D E+ + T LL
Sbjct: 583 RNAAKQGS--HPD-EEIKIDNTQKLL 605
>gi|410941204|ref|ZP_11373003.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410783763|gb|EKR72755.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 682
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 247/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 179 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKVGARLLSILPIWHVFERVVEYV 238
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 239 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 297
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 298 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLASALG 357
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ PL++++ +K+V KI++A G KA +SGGG+LP H+
Sbjct: 358 AYFAGTELYFLTSPLYIVSGLALVLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHV 417
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T+++I + + N VL
Sbjct: 418 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTKLQIRN-DNNAVLTEI 476
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 477 DENGNIAQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIT-DGWMNTGDMGMINFKKT-- 533
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDTIVL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 534 --------LTLTGRAKDTIVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 585
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK + + +L + I LY + K +K F Q+ P ++
Sbjct: 586 PDFEKLQEWAKENGVNETNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 645
Query: 456 EPFTV 460
+PF V
Sbjct: 646 KPFEV 650
>gi|336324216|ref|YP_004604183.1| long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
gi|336107797|gb|AEI15615.1| Long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
Length = 633
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 218/407 (53%), Gaps = 28/407 (6%)
Query: 65 DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVP 124
D+V + D +LS+LP WH++ER + +G +Y+ ++ DDL++Y P + +VP
Sbjct: 216 DMVDLSSDDVWLSILPSWHIFERLAEHLSVMQGCTTVYSNIKTFSDDLKKYSPTIVATVP 275
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE----GFCLTRNQKQPSY 180
++E LY+ + + S + + L+ S AY KR+ + GF K+ +
Sbjct: 276 RLWEALYTKVNATLKKESEKKAKIFNLLVNASAAYRRNKRLLKNNLPGF------KKKGF 329
Query: 181 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 240
+ A + +L P+ + A K + G + VSGGGSLP +D + +AI
Sbjct: 330 FENIFSKGLALVKMILLKPVEMYAGKKFVLLREKFGGRLRLAVSGGGSLPQFVDEWIDAI 389
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
G+++ YG+TE +P IA R C V G++G PI +TEI+IVD + N +LPAG +G ++V
Sbjct: 390 GIRIVTAYGMTECAPGIAGRDLHCEVFGTLGPPIKNTEIRIVDEDGN-ILPAGEEGEIQV 448
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 360
+G QV GY+KN +++ EDG+ TGD+G G LV+ GRAK+ I
Sbjct: 449 KGEQVFSGYYKNEEENEKSFTEDGFFKTGDLGKFT----------LTGELVITGRAKEII 498
Query: 361 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV--LMAAKRLSIVH 418
VL+ GEN++P ++E ++ V++GQD++ GA+IVPD E++ ++ K ++H
Sbjct: 499 VLANGENIDPTKIESTISMFPFVKDAVLVGQDKKGLGALIVPDFEQMKDYVSEKYNKLIH 558
Query: 419 ADASELSKEKTISLLYGELRKW-TSKCSF----QIGPIHVVDEPFTV 460
+ + + ++ K+ +SK F ++ I +D+ F +
Sbjct: 559 SKEDFTKDSYIVEKIRKDINKFLSSKKGFRDYEKLHKISFLDKEFKL 605
>gi|398339044|ref|ZP_10523747.1| long-chain-fatty-acid CoA ligase [Leptospira kirschneri serovar Bim
str. 1051]
Length = 629
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 246/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 126 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYV 185
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 186 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 244
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 245 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 304
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP H+
Sbjct: 305 AYFAGTELYFLTSPLYTVSGLAFVLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHV 364
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 365 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEV 423
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 424 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 480
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 481 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 532
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + + LY + K +K F Q+ P ++
Sbjct: 533 PDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 592
Query: 456 EPFTV 460
+PF V
Sbjct: 593 KPFEV 597
>gi|421089079|ref|ZP_15549894.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410002200|gb|EKO52722.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
Length = 682
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 246/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 179 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYV 238
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 239 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 297
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 298 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 357
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP H+
Sbjct: 358 AYFAGTELYFLTSPLYTVSGLAFVLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHV 417
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 418 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEV 476
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 477 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 533
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 534 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 585
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + + LY + K +K F Q+ P ++
Sbjct: 586 PDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 645
Query: 456 EPFTV 460
+PF V
Sbjct: 646 KPFEV 650
>gi|421130910|ref|ZP_15591101.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|410357714|gb|EKP04934.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 682
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 246/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 179 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYV 238
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 239 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 297
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 298 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 357
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP H+
Sbjct: 358 AYFAGTELYFLTSPLYTVSGLAFVLNSFALDKIVLAKIRAATGGQLKASISGGGALPRHV 417
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 418 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEV 476
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 477 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 533
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 534 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 585
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + + LY + K +K F Q+ P ++
Sbjct: 586 PDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 645
Query: 456 EPFTV 460
+PF V
Sbjct: 646 KPFEV 650
>gi|418688201|ref|ZP_13249357.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418739660|ref|ZP_13296041.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410737058|gb|EKQ81800.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752782|gb|EKR09754.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 682
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 246/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 179 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYV 238
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 239 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 297
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 298 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 357
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP H+
Sbjct: 358 AYFAGTELYFLTSPLYTVSGLAFVLNSFALDKIVLAKIRAATGGQLKASISGGGALPRHV 417
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 418 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEV 476
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 477 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 533
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 534 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 585
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + + LY + K +K F Q+ P ++
Sbjct: 586 PDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 645
Query: 456 EPFTV 460
+PF V
Sbjct: 646 KPFEV 650
>gi|418696124|ref|ZP_13257133.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|409955653|gb|EKO14585.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
Length = 682
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 246/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 179 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYV 238
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 239 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 297
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 298 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 357
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP H+
Sbjct: 358 AYFAGTELYFLTSPLYTVSGLAFILNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHV 417
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 418 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEV 476
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 477 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 533
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 534 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 585
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + + LY + K +K F Q+ P ++
Sbjct: 586 PDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 645
Query: 456 EPFTV 460
+PF V
Sbjct: 646 KPFEV 650
>gi|374812610|ref|ZP_09716347.1| AMP-binding domain-containing protein [Treponema primitia ZAS-1]
Length = 636
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 208/373 (55%), Gaps = 23/373 (6%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISV 123
+ + GD +LS+LP WHV+ER+ Y IF + GI L D Q +PH+M+SV
Sbjct: 220 VFEVKTGDIWLSVLPVWHVFERSIEYIIFYLNSGIAYSKPVSSILLADFQSIRPHWMVSV 279
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY--L 181
P V+E++ + + + + + Y F+ + G + P++
Sbjct: 280 PRVWESIMDWSNRHVKKQGWIFKNGFEFFMTVGIMYNYFRDLTFG-------RIPNFHGR 332
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
V L D+ + +L P+ L +V++ I+ +G KAG+SGGG+LP+ +DLF+ AI
Sbjct: 333 VRLFDFFMGILPLILLCPVQCLTALIVFQPIKKRLGGRFKAGLSGGGALPLKVDLFFNAI 392
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
G+++Q GYGLTE++P++AARR +VG + +TE +IVD +T +LP G G ++V
Sbjct: 393 GIRLQEGYGLTEAAPIVAARRYKAPRRTTVGQLLLNTEARIVD-DTGTILPPGHNGHLQV 451
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 360
RG QVMQGY++ P T +AL DGWL TGDI + + + + GRAKDTI
Sbjct: 452 RGGQVMQGYYRKPELTAKALSPDGWLETGDIAMMTYDNE----------VRITGRAKDTI 501
Query: 361 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 420
VL GENVEP+ +E S + +++GQ+Q+ A++VP +E +++ A+ +I D
Sbjct: 502 VLLGGENVEPVPIENKIRESPWVSHCMIVGQNQKYIAALVVPVQEALMIFAEENNIPIVD 561
Query: 421 ASELSKEKTISLL 433
L ++ I+ L
Sbjct: 562 YESLLQQAEINEL 574
>gi|421109934|ref|ZP_15570441.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|410004961|gb|EKO58765.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 681
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 246/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 297 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 356
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP H+
Sbjct: 357 AYFAGTELYFLTSPLYTVSGLAFILNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHV 416
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 417 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEV 475
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 476 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 532
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 533 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 584
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + + LY + K +K F Q+ P ++
Sbjct: 585 PDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 644
Query: 456 EPFTV 460
+PF V
Sbjct: 645 KPFEV 649
>gi|404476437|ref|YP_006707868.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli B2904]
gi|404437926|gb|AFR71120.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli B2904]
Length = 628
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 223/415 (53%), Gaps = 38/415 (9%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
+R L DI+ + G+K L++LP WH+YER Y G T R+LK+D +P
Sbjct: 209 NVRVLPDIIKLQRGEKLLTVLPIWHIYERTISYVTAIFGCFTAITNKRDLKNDFVEEKPD 268
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
ISVP ++ +Y+G+ K I AA +++ ++ I+ S Y RN +
Sbjct: 269 IFISVPAIWVNIYNGVMKNIDKKPAAVKMMVKSFIQGSIRY------------IRNLRYQ 316
Query: 179 SYLVALI--DWLWARIICAILWPL----HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
+ +V L+ + ++ I + PL H +A+KLVYKKI+ G + +SGGG+LPM
Sbjct: 317 NNMVYLLGDEKKESKKIEYDILPLDPMSHKMAQKLVYKKIKELTGGRLRLTISGGGALPM 376
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
+I+ F EA G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D N +
Sbjct: 377 YIEDFIEATGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN-ICK 435
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G G+ ++G + + Y+K+ T+QA +DG N+GD+G G +V
Sbjct: 436 DGELGVCYIKGPNIFKEYYKDKELTRQA-KKDGLFNSGDLGAYTKQ----------GEIV 484
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
L GRAK+TIVL TGENVEP +E A+ S I QI+++GQD+ GAI+V DK+ V
Sbjct: 485 LTGRAKETIVLLTGENVEPQPIENKAMESKYISQIMLVGQDKASTGAIVVIDKDNVKEFL 544
Query: 412 KRLSIVHADASELSKEK-TISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 460
+ I H D + + K + L+ EL R SK F+ I + + + FT+
Sbjct: 545 DKHKI-HYDENNMENSKDVVKLIKHELSRLVNSKNGFRPYETISKLIITSKDFTI 598
>gi|418676760|ref|ZP_13238038.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|400322660|gb|EJO70516.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
Length = 682
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 246/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 179 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYV 238
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 239 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 297
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 298 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 357
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP H+
Sbjct: 358 AYFAGTELYFLTSPLYSVSGLAFVLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHV 417
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 418 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEV 476
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 477 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 533
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 534 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 585
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + + LY + K +K F Q+ P ++
Sbjct: 586 PDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 645
Query: 456 EPFTV 460
+PF V
Sbjct: 646 KPFEV 650
>gi|418667893|ref|ZP_13229298.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410756338|gb|EKR17963.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 681
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 246/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 297 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 356
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ P + +A +K+V KI++A G +A +SGGG+LP H+
Sbjct: 357 AYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHV 416
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 417 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEI 475
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 476 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 532
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+++E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 533 --------LTLTGRAKDTVVLLGGENVEPVQIENKLQESAYISQCMVIGQDQKNLGAIVV 584
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + I LY + K +K F Q+ P ++
Sbjct: 585 PDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 644
Query: 456 EPFTV 460
+PF V
Sbjct: 645 KPFEV 649
>gi|398347129|ref|ZP_10531832.1| long-chain-fatty-acid CoA ligase [Leptospira broomii str. 5399]
Length = 679
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 232/444 (52%), Gaps = 70/444 (15%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
K LS+LP WHV+ER Y S G YT VR+L+ DL +P +M S P ++E +Y+G
Sbjct: 219 KLLSILPVWHVFERVVEYVCISIGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNG 278
Query: 134 IQKQIFTSSAARRVVARALIRISFAYT----AFKRIYEGFCLTRNQKQP--SY---LVAL 184
I +I S + R L ++++ ++ A R G + + + P S+ ++ +
Sbjct: 279 IYTRINDPSQTP-TIRRTLFKLAYFFSDKNNASTRFLSGNEVDYHGRNPISSFFYGILMV 337
Query: 185 IDWLWA-----RIICAIL-------------WPLHLLA-----------EKLVYKKIQSA 215
I +L II AI PL++++ +K+V KI++A
Sbjct: 338 IQYLLTGPFTLSIITAIAAYMLAPTSFGYLSLPLYVVSGLGLFLNSATLDKVVLSKIRTA 397
Query: 216 IGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 274
G + +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV++ R ++GSVG +
Sbjct: 398 TGGNLRASISGGGALPRHVDEFFNNIGINVLEGYGMTETSPVLSVRTFQKLIIGSVGSIV 457
Query: 275 NHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDE 322
T ++I + + N+VL G KG+V V+G QVM+GYFKN AT + L
Sbjct: 458 PKTRLQIRN-DNNDVLTEVDEGGHITQGKLGRKGVVFVKGPQVMKGYFKNDEATAKTL-V 515
Query: 323 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 382
DGW+NTGD+G I + L L GRAKDT+VL GENVEP+ +E S
Sbjct: 516 DGWMNTGDMGMINFKRT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESPY 565
Query: 383 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWT 441
I Q +VIGQDQ+ GAII+PD E++ AK I +D +L K + E++
Sbjct: 566 ISQCMVIGQDQKNLGAIIIPDFEKLGEWAKENGIDISDREKLIENPKIVDFYRKEIKNLN 625
Query: 442 S-----KCSFQIGPIHVVDEPFTV 460
+ K Q+ P ++ +PF V
Sbjct: 626 NAKNGFKSFEQVTPFFLITKPFEV 649
>gi|408794088|ref|ZP_11205693.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461323|gb|EKJ85053.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 650
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 207/376 (55%), Gaps = 27/376 (7%)
Query: 38 LFSFVLIDLNTWMPIPKM-TNFQIRSLYDIVPAENG--DKFLSMLPPWHVYERACGYFIF 94
LF+ + T P M T+ + S +P E G D+FLS+LP WH +ER
Sbjct: 203 LFTIIYTSGTTGEPKGVMLTHANMISQLRNIPIEIGPKDRFLSILPVWHSFERVFQMGTI 262
Query: 95 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 154
+ G YT VRN+++DL +P +M S P ++E++Y GIQ +I T S ++V+ +
Sbjct: 263 AVGATQYYTNVRNIREDLLIVKPTFMASAPRLWESIYQGIQSKIQTGSIMKKVLFK---- 318
Query: 155 ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC----AILWPLHLLAEKLVYK 210
AY +I + + Y L + II +L+ + + +V
Sbjct: 319 --LAYGCALQIQSSIQFLKGNRLDLYGRNLFQSITLGIISLVSITVLFVPFFILDLIVLS 376
Query: 211 KIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 269
K++ A G G VSGGGSLP HID F+ I + V GYGLTE+SP +A R V+GS
Sbjct: 377 KLRHATGGKLRGTVSGGGSLPFHIDEFFNTIRIPVFEGYGLTETSPGLAFRTAKHLVVGS 436
Query: 270 VGHPINHTEIKIVDAETNEVL---PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 326
VG TEI + D ET V+ G KG + VRG Q+M+GY+K P AT + L +DGWL
Sbjct: 437 VGPIFPGTEILLKDIETGVVIYPPKKGIKGEIYVRGPQIMKGYYKRPEATSKVLSDDGWL 496
Query: 327 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 386
NTGD+G + +++ L + GR K+T+VL GEN+EP+ +E ++S+LI Q+
Sbjct: 497 NTGDLGVMTFNNT----------LKIVGRTKETVVLLNGENIEPVPIENKLIQSTLIEQV 546
Query: 387 VVIGQDQRRPGAIIVP 402
+++GQDQ+ GA+I+P
Sbjct: 547 MIVGQDQKYLGALILP 562
>gi|219119029|ref|XP_002180281.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408538|gb|EEC48472.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 633
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 227/402 (56%), Gaps = 38/402 (9%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
+ LS+LP WH+ ER+ ++ +RG ++Y+++R K+DL +++P + + VP V E + +
Sbjct: 230 ETMLSLLPVWHITERSFELWMLARGCNVVYSSIRTFKNDLAKHRPEWAVLVPRVLEKIAT 289
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
G+Q + + S +++++ S A ++I +G+ + +QP ++ L ++
Sbjct: 290 GVQDKFSSGSLPVKLLSKLFTSTSKAAAKHRKITQGYVVG---EQPP---GAMEKLASKA 343
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
+ L PL+ + K+V+ K+Q+ G + +SGG +L ++ FYEA G+ + V YGLT
Sbjct: 344 LLVALSPLNAVGNKIVWSKVQNGFGGRMRTIMSGGSALSGSLEEFYEAAGLTIIVAYGLT 403
Query: 252 ESSPVIAARRPTCNVL--GSVGHPINHTEIKIVDAETNE------VLPAGSKGIVKVRGS 303
E +P+I+ RR N++ G VG TE+++V E+ LPAG G+V RG
Sbjct: 404 ECAPLISHRRRDANLVTGGCVGTACIDTELRVVSPESKASTTPRPALPAGEVGVVIARGP 463
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
Q+M+GY+K+ + TK+A+D+ G+ +TGD+G + P G L+L GRAKDTIVLS
Sbjct: 464 QIMKGYYKDVAETKKAIDQFGFFDTGDLGRVNP---------ATGDLILTGRAKDTIVLS 514
Query: 364 TGENVEPLELEEAALRS-SLIRQIVVIGQDQRRPGAIIVPDKEEV----LMAAKRLSIVH 418
GENVEP LE+A L SLI Q+++ GQD R+ AI+V E+ ++ +++
Sbjct: 515 NGENVEPGPLEDAILGELSLIEQVMLTGQDGRKLTAIVVLSPSELANEGFLSKDEGALMQ 574
Query: 419 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 460
+++ K+ +KW Q+ ++V EPF +
Sbjct: 575 KRNEQVNDPKSTK----RFQKWE-----QVKDVYVTLEPFAM 607
>gi|224004188|ref|XP_002295745.1| probable long-chain-fatty-acid--CoA ligase [Thalassiosira
pseudonana CCMP1335]
gi|209585777|gb|ACI64462.1| probable long-chain-fatty-acid--CoA ligase [Thalassiosira
pseudonana CCMP1335]
Length = 658
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/352 (36%), Positives = 204/352 (57%), Gaps = 33/352 (9%)
Query: 64 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 123
YD+ G+ +S+LP WH+ ERA IFSRG L+Y+ V++LK+DL ++PH+M+ V
Sbjct: 212 YDVSEPLPGEVMVSILPVWHITERAAELCIFSRGCTLVYSNVKHLKNDLALHKPHWMMLV 271
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIR----ISFAYTAFKRIYEGFCLTRNQKQPS 179
P V E + G++ + + + ++ARA+I ++ + ++ G + K+P+
Sbjct: 272 PRVLEKVALGVKDKF----SKKNMIARAMIHFFTLVASTKSKLLKVARGQVIA--AKKPN 325
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYE 238
L +++R + +L PL + LV+ K+++A+ G K VSGG +L ++ FYE
Sbjct: 326 ----LFRRVFSRCLATLLTPLDAIGHALVWNKVKAALGGRQKLIVSGGSALNGSLEEFYE 381
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVL--GSVGHPINHTEIKIVDAETN------EVL 290
GV + VGYGLTE SP+I RR N++ G VG P+ TEI++VD +
Sbjct: 382 TCGVLLIVGYGLTECSPLICHRRSDSNLVAGGCVGLPVTSTEIRVVDVNAKAGDAERTSI 441
Query: 291 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 350
G G+V +G QVM+GY+ N AT +++D+ GWL+TGD+G+I P + L
Sbjct: 442 EKGQIGLVLAKGPQVMKGYYNNQKATNKSIDKYGWLDTGDLGYINPATND---------L 492
Query: 351 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI-VVIGQDQRRPGAIIV 401
+ GRAKDTIVLS GENVEP LE+ L ++I Q+ + QD+++ AI V
Sbjct: 493 FITGRAKDTIVLSNGENVEPSPLEDVLLGCNMIDQVTITTSQDEKQLHAIAV 544
>gi|418698153|ref|ZP_13259132.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418711864|ref|ZP_13272616.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418717129|ref|ZP_13276966.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|418726085|ref|ZP_13284696.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421123845|ref|ZP_15584115.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135046|ref|ZP_15595176.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|409959995|gb|EKO23749.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410020929|gb|EKO87724.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410438332|gb|EKP87418.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410762857|gb|EKR29016.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410767830|gb|EKR43091.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410787196|gb|EKR80930.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|456969848|gb|EMG10764.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 681
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 245/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 297 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 356
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ P + +A +K+V KI++A G +A +SGGG+LP H+
Sbjct: 357 AYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHV 416
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 417 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEI 475
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 476 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 532
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 533 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 584
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + I LY + K +K F Q+ P ++
Sbjct: 585 PDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 644
Query: 456 EPFTV 460
+PF V
Sbjct: 645 KPFEV 649
>gi|307719093|ref|YP_003874625.1| hypothetical protein STHERM_c14120 [Spirochaeta thermophila DSM
6192]
gi|306532818|gb|ADN02352.1| hypothetical protein STHERM_c14120 [Spirochaeta thermophila DSM
6192]
Length = 630
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 136/354 (38%), Positives = 198/354 (55%), Gaps = 21/354 (5%)
Query: 57 NF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDL 112
NF Q++ + ++ GD +LS+LP WH +ER Y S + Y+ R + D+
Sbjct: 206 NFLHQVKGVPILLKVGPGDIWLSVLPVWHSFERMMQYVALSSASAIAYSKPIGRIMLQDM 265
Query: 113 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 172
+P +M SVP ++E + GI + I + + +A + + AY F + +G L
Sbjct: 266 ATLKPTWMASVPRIWEGIRKGILQTIKKEPPLVQAIFQASLVVGRAYAFFAHMVKG-ELP 324
Query: 173 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
R + +P ++D + I +LWP LA LV++K+ +G AG+SGGG+LP
Sbjct: 325 RFRWRPR----ILDRMAGLIPFLLLWPFKQLAHLLVFRKLHRKLGGRFVAGISGGGALPP 380
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
+D F++AIG+ V GYGLTE++PV+A R V +VG TEI+I D E N VLP
Sbjct: 381 EVDGFFDAIGITVLEGYGLTEAAPVLAVRSYYHPVPHTVGPVFPDTEIQIRDEEGN-VLP 439
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G +G V RG QVM GY K P T++ LDE+GWLNTGD+G + + L
Sbjct: 440 PGRQGTVFARGGQVMLGYLKAPEETRKVLDEEGWLNTGDLGMLTWDNE----------LA 489
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+ GRAKDTIVL GENVEP LE+A L+ +V+GQD++ GA+I D+E
Sbjct: 490 ITGRAKDTIVLRGGENVEPAPLEQALKEHPLVAHAMVVGQDEKYLGALIFVDQE 543
>gi|24215009|ref|NP_712490.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|417762662|ref|ZP_12410650.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417772209|ref|ZP_12420098.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417777581|ref|ZP_12425398.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|418671706|ref|ZP_13233055.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418680951|ref|ZP_13242188.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418692704|ref|ZP_13253782.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418704164|ref|ZP_13265043.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418730633|ref|ZP_13289127.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|421120870|ref|ZP_15581175.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|24196054|gb|AAN49508.1|AE011400_13 long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|400327389|gb|EJO79641.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400357937|gb|EJP14057.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409941407|gb|EKN87036.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409945580|gb|EKN95595.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410346208|gb|EKO97218.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410572568|gb|EKQ35633.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410581404|gb|EKQ49216.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410766144|gb|EKR36832.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410774842|gb|EKR54846.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|455667422|gb|EMF32743.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 681
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 245/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 297 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 356
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ P + +A +K+V KI++A G +A +SGGG+LP H+
Sbjct: 357 AYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHV 416
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 417 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEI 475
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 476 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 532
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 533 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 584
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + I LY + K +K F Q+ P ++
Sbjct: 585 PDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 644
Query: 456 EPFTV 460
+PF V
Sbjct: 645 KPFEV 649
>gi|45657502|ref|YP_001588.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417765801|ref|ZP_12413757.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417782883|ref|ZP_12430606.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|421086152|ref|ZP_15547003.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421102594|ref|ZP_15563198.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600741|gb|AAS70225.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|400351740|gb|EJP03953.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|409953584|gb|EKO08080.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|410367708|gb|EKP23092.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431717|gb|EKP76077.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
Length = 681
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 245/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 297 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 356
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ P + +A +K+V KI++A G +A +SGGG+LP H+
Sbjct: 357 AYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHV 416
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 417 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEI 475
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 476 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 532
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 533 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 584
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + I LY + K +K F Q+ P ++
Sbjct: 585 PDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 644
Query: 456 EPFTV 460
+PF V
Sbjct: 645 KPFEV 649
>gi|456986311|gb|EMG21907.1| AMP-binding enzyme [Leptospira interrogans serovar Copenhageni str.
LT2050]
Length = 646
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 245/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 140 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYV 199
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 200 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 258
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 259 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 318
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ P + +A +K+V KI++A G +A +SGGG+LP H+
Sbjct: 319 AYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHV 378
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 379 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEI 437
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 438 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 494
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 495 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 546
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + I LY + K +K F Q+ P ++
Sbjct: 547 PDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 606
Query: 456 EPFTV 460
+PF V
Sbjct: 607 KPFEV 611
>gi|456821979|gb|EMF70485.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 643
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 245/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 140 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYV 199
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 200 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 258
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 259 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 318
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ P + +A +K+V KI++A G +A +SGGG+LP H+
Sbjct: 319 AYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHV 378
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 379 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEI 437
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 438 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 494
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 495 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 546
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + I LY + K +K F Q+ P ++
Sbjct: 547 PDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 606
Query: 456 EPFTV 460
+PF V
Sbjct: 607 KPFEV 611
>gi|384108995|ref|ZP_10009881.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
gi|383869439|gb|EID85052.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
Length = 643
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 221/400 (55%), Gaps = 29/400 (7%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYET 129
GD+ LS+LP WHV+ER Y I +G + Y+ L D ++ PH + +VP V+E
Sbjct: 231 GDRALSVLPVWHVFEREVEYVILIQGGAICYSKPIGSILLADFKKLNPHLLPAVPRVFEA 290
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR--IYEGFCLTRNQKQPSYLVALIDW 187
+Y G+ K++ + + + ++ + A +R + C T + +++ ++ W
Sbjct: 291 VYDGVTKKMRKTGGLVLKLFNFFVGVAKIHKAMQRKMFNQNPCFTAYRPVLWWILFILPW 350
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
+++WPL+ L + L+++KI+ +G + + G++GGG+ P +ID F+ AIGV++
Sbjct: 351 -------SLMWPLYWLGDLLIFRKIKVMLGSNFRVGIAGGGAYPKNIDEFFWAIGVEIVE 403
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE++P++A R + ++G PI + +IVD + VL G +GI++++G VM
Sbjct: 404 GYGLTETAPIVAVRPIAAPIYRTIGSPIRGVQARIVDMD-GYVLERGQQGILQIKGPTVM 462
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GY+K P T++ + DGWL+TGD+ H+ L ++GR KDTIVL GE
Sbjct: 463 KGYYKRPDLTEKVMTVDGWLDTGDLAVFTIHNE----------LQIKGRIKDTIVLRGGE 512
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
N+EPL +E S I+Q VV+GQD+R A+I+ D++E+ A I + L
Sbjct: 513 NLEPLPIEMKLSESRFIKQAVVLGQDKRYLAALILVDEDEIKNYAAENGIQYDTYENLLA 572
Query: 427 EKTISLLY-GELRKW-TSKCSFQ----IGPIHVVDEPFTV 460
I LY GE+ +SK F+ I ++ +PF V
Sbjct: 573 SNGIQSLYEGEIANLISSKNGFKMFERINKFTLITKPFEV 612
>gi|386074346|ref|YP_005988663.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|353458135|gb|AER02680.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 681
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 245/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 178 LFALIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 297 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 356
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ P + +A +K+V KI++A G +A +SGGG+LP H+
Sbjct: 357 AYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHV 416
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 417 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEI 475
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 476 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 532
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 533 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 584
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + I LY + K +K F Q+ P ++
Sbjct: 585 PDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 644
Query: 456 EPFTV 460
+PF V
Sbjct: 645 KPFEV 649
>gi|455792690|gb|EMF44430.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 681
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 245/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALIDWLW 189
++++ ++ K R +G + + P S+ L L L
Sbjct: 297 FKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALG 356
Query: 190 ARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A L+ P + +A +K+V KI++A G +A +SGGG+LP H+
Sbjct: 357 AYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHV 416
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 417 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEI 475
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 476 DESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 532
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q ++IGQDQ+ GAI+V
Sbjct: 533 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMIIGQDQKNLGAIVV 584
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK I ++ +L + I LY + K +K F Q+ P ++
Sbjct: 585 PDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 644
Query: 456 EPFTV 460
+PF V
Sbjct: 645 KPFEV 649
>gi|421117548|ref|ZP_15577908.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410010882|gb|EKO69013.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
Length = 681
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 163/489 (33%), Positives = 244/489 (49%), Gaps = 83/489 (16%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ + ++ + G + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 296
Query: 153 IRISFAYTAFK----RIYEG-----------------------FCLTRNQKQPSYLVALI 185
++++ ++ K R +G F LT P L L
Sbjct: 297 FKLAYFFSRKKNQALRFLKGIEVDYAGRNPIVSFFYGILMFFQFLLT----GPFTLTVLA 352
Query: 186 DWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSL 229
L A L+ P + +A +K+V KI++A G +A +SGGG+L
Sbjct: 353 GALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGAL 412
Query: 230 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 289
P H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N V
Sbjct: 413 PRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAV 471
Query: 290 LPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 337
L G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 472 LTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFK 530
Query: 338 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 397
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ G
Sbjct: 531 KT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLG 580
Query: 398 AIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPI 451
AI+VPD E++ AK I ++ +L + I LY + K +K F Q+ P
Sbjct: 581 AIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPF 640
Query: 452 HVVDEPFTV 460
++ +PF V
Sbjct: 641 ILISKPFEV 649
>gi|456863005|gb|EMF81517.1| AMP-binding enzyme [Leptospira weilii serovar Topaz str. LT2116]
Length = 648
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 245/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 145 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYV 204
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 205 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 263
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARI-------------- 192
R+++ ++ K R +G + + P S+ ++ +L +
Sbjct: 264 FRLAYFFSRKKNQALRFLKGIEVDYTGRNPIGSFFYGILMFLQFLLTGPFTLTVFAGVLG 323
Query: 193 ----------ICAILWPLHLLA--------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
+ + L+ + LA +K+V KI++A G KA +SGGG+LP H+
Sbjct: 324 VYFAGTELYYLTSFLYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHV 383
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 384 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEM 442
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 443 DENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT-- 499
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDTIVL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 500 --------LTLTGRAKDTIVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVV 551
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ A+ I + +L + + LY + K +K F Q+ P ++
Sbjct: 552 PDFEKLQEWAQENGINETNKDKLIENPKVYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 611
Query: 456 EPFTV 460
+PF V
Sbjct: 612 KPFEV 616
>gi|359726629|ref|ZP_09265325.1| long-chain-fatty-acid--CoA ligase [Leptospira weilii str.
2006001855]
Length = 681
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 245/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARI-------------- 192
R+++ ++ K R +G + + P S+ ++ +L +
Sbjct: 297 FRLAYFFSRKKNQALRFLKGIEVDYTGRNPIGSFFYGILMFLQFLLTGPFTLTVFAGVLG 356
Query: 193 ----------ICAILWPLHLLA--------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
+ + L+ + LA +K+V KI++A G KA +SGGG+LP H+
Sbjct: 357 VYFAGTELYYLTSFLYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHV 416
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 417 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEM 475
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 476 DENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT-- 532
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 533 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVV 584
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ A+ I + +L + + LY + K +K F Q+ P ++
Sbjct: 585 PDFEKLQEWAQENGISETNKDKLIENPKVYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 644
Query: 456 EPFTV 460
+PF V
Sbjct: 645 KPFEV 649
>gi|183222283|ref|YP_001840279.1| long-chain acyl-CoA synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912333|ref|YP_001963888.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777009|gb|ABZ95310.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780705|gb|ABZ99003.1| Long-chain acyl-CoA synthetase (AMP-forming) [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 629
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 204/357 (57%), Gaps = 28/357 (7%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
FQ+ +L + GDK LS+LP WH++ER F S G Y++VR LK+DL+ +P
Sbjct: 208 FQLHNL--PIRLNKGDKTLSILPIWHIFERIFEIFSLSYGACTYYSSVRTLKEDLRFVKP 265
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
++M S P ++E++YSGI + SS ++ + + + + + ++I G L
Sbjct: 266 NFMASAPRLWESIYSGILGTLNKSSRLKQKMFQVSMFFAKIFFHSRQIITGNVL---DIH 322
Query: 178 PSYLVAL-IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
P I +++ I ++W +L+ + LV KI+ A G + VSGGG+LP H+D
Sbjct: 323 PIVFWKFSIRYVFHLIRFFLVWIPYLVFDFLVLSKIRKATGGELRGSVSGGGALPFHVDE 382
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA--- 292
F+ IG+ V GYG+TE++PV+A R + GSVG T++++VD +T EV
Sbjct: 383 FFNMIGIPVLEGYGMTETAPVLAMRTFEEIIPGSVGKIFPKTQLRLVDLQTGEVFLDTEI 442
Query: 293 -----GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG-WIAPHHSRGRSRRC 346
G KG + V+G+QVM GY+KNP AT + L DGWLNTGD+G + + HH R
Sbjct: 443 GKFVYGRKGEIHVKGNQVMAGYYKNPDATNKVL-VDGWLNTGDLGIFTSNHHLR------ 495
Query: 347 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
+ GR+K+TIVL GENVEP+ +E L S I Q +V+GQDQ+ A++ P+
Sbjct: 496 -----IVGRSKETIVLLGGENVEPVPIESKILESEWIDQCMVVGQDQKFLSALVYPN 547
>gi|417777979|ref|ZP_12425791.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410781949|gb|EKR66516.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 682
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/487 (32%), Positives = 243/487 (49%), Gaps = 79/487 (16%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 179 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYV 238
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 239 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 297
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP------------------------------ 178
R+++ ++ K R +G + + P
Sbjct: 298 FRLAYFFSRKKNQALRFLKGIEVDYTGRNPIGSFFYGILMFVQFLLTGPFTLTVFAGVLG 357
Query: 179 -----SYLVALIDWLWARIICAILWPLHLLA-EKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
+ L L +L+ +I + + L+ +K+V KI++A G KA +SGGG+LP
Sbjct: 358 VYFAGTELYYLTSFLY--VIAGLAFLLNSFTLDKIVLAKIRAATGGQLKASISGGGALPR 415
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 416 HVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLT 474
Query: 292 A------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 339
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 475 EMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT 533
Query: 340 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 399
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI
Sbjct: 534 ----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAI 583
Query: 400 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHV 453
+VPD E++ A+ I + +L + + LY + K +K F Q+ P +
Sbjct: 584 VVPDFEKLQEWAQENGISETNKDKLIENPKVYDLYRKEIKALNNTKNGFKSFEQVTPFIL 643
Query: 454 VDEPFTV 460
+ +PF V
Sbjct: 644 ISKPFEV 650
>gi|418721482|ref|ZP_13280659.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418736583|ref|ZP_13292982.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410742174|gb|EKQ90924.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410747469|gb|EKR00374.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
Length = 681
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 241/486 (49%), Gaps = 77/486 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP------------------------------ 178
R+++ ++ K R +G + + P
Sbjct: 297 FRLAYFFSRKKNQALRFLKGIEVDYTGRNPIWSFFYGILMFIQFLLTGPFTLTVFAGGLG 356
Query: 179 -----SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
+ L L + + A+L L +K+V KI++A G KA +SGGG+LP H
Sbjct: 357 AYFAGTELYYLTSFFYVIAGLALLLNSFTL-DKIVLAKIRAATGGQLKASISGGGALPRH 415
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I ++ N VL
Sbjct: 416 VDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQI-RSDNNAVLTE 474
Query: 293 ------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 340
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 475 MDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT- 532
Query: 341 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 400
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+
Sbjct: 533 ---------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIV 583
Query: 401 VPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVV 454
VPD E++ A+ I+ + +L + + LY + K +K F Q+ P ++
Sbjct: 584 VPDFEKLQEWAQENGIIETNKDKLIENPRVYDLYRKEIKALNNTKNGFKSFEQVTPFILI 643
Query: 455 DEPFTV 460
+PF V
Sbjct: 644 SKPFEV 649
>gi|421096224|ref|ZP_15556931.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410361125|gb|EKP12171.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
Length = 681
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 240/486 (49%), Gaps = 77/486 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP------------------------------ 178
R+++ ++ K R +G + + P
Sbjct: 297 FRLAYFFSRKKNQALRFLKGIEVDYTGRNPIWSFFYGILMFIQFLLTGPFTLTVFAGGLG 356
Query: 179 -----SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
+ L L + + A+L L +K+V KI++A G KA +SGGG LP H
Sbjct: 357 AYFAGTELYYLTSFFYVIAGLALLLNSFTL-DKIVLAKIRAATGGQLKASISGGGGLPRH 415
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I ++ N VL
Sbjct: 416 VDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQI-RSDNNAVLTE 474
Query: 293 ------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 340
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 475 MDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT- 532
Query: 341 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 400
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+
Sbjct: 533 ---------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIV 583
Query: 401 VPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVV 454
VPD E++ A+ I+ + +L + + LY + K +K F Q+ P ++
Sbjct: 584 VPDFEKLQEWAQENGIIETNKDKLIENPRVYDLYRKEIKALNNTKNGFKSFEQVTPFILI 643
Query: 455 DEPFTV 460
+PF V
Sbjct: 644 SKPFEV 649
>gi|408792234|ref|ZP_11203844.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408463644|gb|EKJ87369.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 682
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 244/483 (50%), Gaps = 71/483 (14%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVP----AENGDKFLSMLPPWHVYERACGY 91
L++ + T MP + M + I ++ +VP D+ LS+LP WH++ER Y
Sbjct: 181 LYTLIYTSGTTGMPKGVMLMHSNMIHQMHYVVPRVAKVSPDDRMLSILPVWHIFERVVEY 240
Query: 92 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSAARRVV 148
F G YT V L++D+Q+ +P +M S P V+E++Y+GI +I + RR +
Sbjct: 241 FAIINGGSTYYTKVTELRNDIQKARPTFMASAPRVWESIYNGIYTRINDPKQTPPVRRFL 300
Query: 149 ARALIRISFAYTAFKRI-------YEG-----------FCLTRNQKQPSYLVALIDWLWA 190
+ S Y A R YEG F + + + V+++ L
Sbjct: 301 FKVAYFFSKHYHAAVRFLKGWEVDYEGRNIIQSLGLSLFSIIKLLLTGPFTVSILSILAV 360
Query: 191 RII----CAILWPLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+ + + PL+++A +++V KI+ A G +A +SGGG+L H+D
Sbjct: 361 QFVLPEESSFKTPLYVVAGLGVLFNSFTLDRIVLAKIRQATGGHLRATLSGGGALQKHVD 420
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---- 290
F+ IG+ V GYG+TE+ PVI+AR ++GSVG + ++++I D N +
Sbjct: 421 AFFMDIGITVLEGYGMTETGPVISARTFDRPIMGSVGDIVPLSQVQIRDDAGNVLCHIDD 480
Query: 291 -------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 343
G KG+V ++G QVM+GY+KNP TK+ + D W+NTGDIG I
Sbjct: 481 KKNIIFGKLGVKGVVHIKGPQVMKGYYKNPETTKKTI-VDNWMNTGDIGMI--------- 530
Query: 344 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
L L GRAKDTIVL GENVEP+ +E S+ I+Q +++GQDQ+ GAIIVPD
Sbjct: 531 -NFKKTLTLTGRAKDTIVLLGGENVEPVPIENKIDESTYIKQSMIVGQDQKVLGAIIVPD 589
Query: 404 KEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-KCSF----QIGPIHVVDEP 457
+ ++ A+ I + +L + K + E+R + S K F Q+ + ++ +P
Sbjct: 590 FDALIPWAEENGISEKNPEKLITNPKVVDFYKKEVRNFNSVKTGFKNFEQVQYVTLITKP 649
Query: 458 FTV 460
F V
Sbjct: 650 FEV 652
>gi|418746716|ref|ZP_13303036.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|410792425|gb|EKR90360.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 682
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 245/487 (50%), Gaps = 79/487 (16%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 179 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYV 238
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 239 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 297
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLHLLA-- 204
++++ ++ K R +G + + P S+ ++ ++ + + + L +LA
Sbjct: 298 FKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVLAGV 355
Query: 205 --------------------------------EKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
+K+V KI++A G KA +SGGG+LP
Sbjct: 356 FGVYLAGTELYYLTSFFYTVAGLAFFLNSFTLDKIVLSKIRAATGGQLKASISGGGALPR 415
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 416 HVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLT 474
Query: 292 A------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 339
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 475 EIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMINFKKT 533
Query: 340 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 399
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI
Sbjct: 534 ----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAI 583
Query: 400 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHV 453
+VPD E++ A+ I + +L + + + LY + K +K F Q+ P +
Sbjct: 584 VVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTPFIL 643
Query: 454 VDEPFTV 460
+ +PF V
Sbjct: 644 ISKPFEV 650
>gi|359685931|ref|ZP_09255932.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
Length = 681
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 245/487 (50%), Gaps = 79/487 (16%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLHLLA-- 204
++++ ++ K R +G + + P S+ ++ ++ + + + L +LA
Sbjct: 297 FKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVLAGV 354
Query: 205 --------------------------------EKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
+K+V KI++A G KA +SGGG+LP
Sbjct: 355 FGVYLAGTELYYLTSFFYTVAGLAFLLNSFTLDKIVLSKIRAATGGQLKASISGGGALPR 414
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 415 HVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLT 473
Query: 292 A------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 339
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 474 EIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMINFKKT 532
Query: 340 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 399
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI
Sbjct: 533 ----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAI 582
Query: 400 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHV 453
+VPD E++ A+ I + +L + + + LY + K +K F Q+ P +
Sbjct: 583 VVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTPFIL 642
Query: 454 VDEPFTV 460
+ +PF V
Sbjct: 643 ISKPFEV 649
>gi|116330937|ref|YP_800655.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116124626|gb|ABJ75897.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 681
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 247/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPVWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQPSY-----LVALIDWL---------WARIIC 194
R+++ ++ K R +G + + P + ++ I +L +A +
Sbjct: 297 FRLAYFFSRKKNQALRFLKGIEVDYTGRNPIWSFFYGILMFIQFLLTGPFTLTVFAGALG 356
Query: 195 A---------------ILWPLHLLA-----EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A ++ L LL +K+V KI++A G KA +SGGG+LP H+
Sbjct: 357 AYFAGTELYYLTSFFYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHV 416
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 417 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEM 475
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG++ ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 476 DENGKITQGKLGLKGVLFIKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT-- 532
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 533 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVV 584
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ A+ I+ + +L + + LY + K +K F Q+ P ++
Sbjct: 585 PDFEKLQEWAQENGIIETNKDKLIENPRVYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 644
Query: 456 EPFTV 460
+PF V
Sbjct: 645 KPFEV 649
>gi|418755411|ref|ZP_13311616.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|409964206|gb|EKO32098.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
Length = 681
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 245/487 (50%), Gaps = 79/487 (16%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLHLLA-- 204
++++ ++ K R +G + + P S+ ++ ++ + + + L +LA
Sbjct: 297 FKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVLAGA 354
Query: 205 --------------------------------EKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
+K+V KI++A G KA +SGGG+LP
Sbjct: 355 FGVYLAGTELYYLTSFFYTVAGLAFFLNSFTLDKIVLSKIRAATGGQLKASISGGGALPR 414
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 415 HVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLT 473
Query: 292 A------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 339
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 474 EIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMINFKKT 532
Query: 340 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 399
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI
Sbjct: 533 ----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAI 582
Query: 400 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHV 453
+VPD E++ A+ I + +L + + + LY + K +K F Q+ P +
Sbjct: 583 VVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTPFIL 642
Query: 454 VDEPFTV 460
+ +PF V
Sbjct: 643 ISKPFEV 649
>gi|398335373|ref|ZP_10520078.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 635
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 204/347 (58%), Gaps = 31/347 (8%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ LS+LP WH++ER F+ G + YT +R+LK+D+Q +P +M S P ++E+++
Sbjct: 224 DRILSILPVWHIFERIFEIVSFTFGCKTYYTNIRSLKEDMQIVKPTFMASAPRLWESIFQ 283
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRI-YEGFCLTRNQK---QPSYL-VALIDW 187
GIQ ++ +++ + ++ + RI Y + +N++ P + V +
Sbjct: 284 GIQTKLQGMKGISKILFQGALKTN-------RIRYRHLAVLKNRELKLNPEFWPVTIFKK 336
Query: 188 LWARIICA-ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 245
L + II I+ P LL + +V KK++ A G + KA VSGGG+LP+H+D + AIG+ V
Sbjct: 337 LISFIILTWIVLPAKLL-DLIVLKKVRMATGGNLKASVSGGGALPLHVDELFNAIGIPVL 395
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL-----PAGSKGIVKV 300
GYGLTE+SP+++ R P ++G+VG T+++IVD T + + P G KG + V
Sbjct: 396 EGYGLTETSPILSMRTPEELIVGTVGKIFPETQVRIVDVATGKNIYPSSNPFGKKGELIV 455
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 360
+G QVM+GY+KN AT++ L +DGW TGD+ + L + GR K+TI
Sbjct: 456 KGPQVMKGYYKNAEATEKVL-QDGWFKTGDLAVLT----------ANSYLKIVGRIKETI 504
Query: 361 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
VLS GEN+EP+ +E S LI +V+GQD++ PG ++VP+ E +
Sbjct: 505 VLSNGENLEPVPIEAKLQESPLIEACMVVGQDKKFPGVLVVPNLENL 551
>gi|410450361|ref|ZP_11304402.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|410015874|gb|EKO77965.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|456875112|gb|EMF90343.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 682
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 245/487 (50%), Gaps = 79/487 (16%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 179 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYV 238
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 239 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 297
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLHLLA-- 204
++++ ++ K R +G + + P S+ ++ ++ + + + L +LA
Sbjct: 298 FKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVLAGV 355
Query: 205 --------------------------------EKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
+K+V KI++A G KA +SGGG+LP
Sbjct: 356 FGVYLAGTELYYLTSFFYTVAGLAFFLNSFTLDKIVLSKIRAATGGQLKASISGGGALPR 415
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 416 HVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLT 474
Query: 292 A------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 339
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 475 EIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMINFKKT 533
Query: 340 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 399
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI
Sbjct: 534 ----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAI 583
Query: 400 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHV 453
+VPD E++ A+ I + +L + + + LY + K +K F Q+ P +
Sbjct: 584 VVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTPFIL 643
Query: 454 VDEPFTV 460
+ +PF V
Sbjct: 644 ISKPFEV 650
>gi|422004329|ref|ZP_16351549.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417256998|gb|EKT86406.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 681
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 245/487 (50%), Gaps = 79/487 (16%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLHLLA-- 204
++++ ++ K R +G + + P S+ ++ ++ + + + L +LA
Sbjct: 297 FKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVLAGV 354
Query: 205 --------------------------------EKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
+K+V KI++A G KA +SGGG+LP
Sbjct: 355 FGVYLAGTELYYLTSFFYTVAGLAFLLNSFTLDKIVLSKIRAATGGQLKASISGGGALPR 414
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 415 HVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLT 473
Query: 292 A------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 339
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 474 EIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMINFKKT 532
Query: 340 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 399
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI
Sbjct: 533 ----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAI 582
Query: 400 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHV 453
+VPD E++ A+ I + +L + + + LY + K +K F Q+ P +
Sbjct: 583 VVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTPFIL 642
Query: 454 VDEPFTV 460
+ +PF V
Sbjct: 643 ISKPFEV 649
>gi|116328213|ref|YP_797933.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116120957|gb|ABJ79000.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
Length = 681
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 247/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQPSY-----LVALIDWL---------WARIIC 194
R+++ ++ K R +G + + P + ++ I +L +A +
Sbjct: 297 FRLAYFFSRKKNQALRFLKGIEVDYTGRNPIWSFFYGILMFIQFLLTGPFTLTVFAGALG 356
Query: 195 A---------------ILWPLHLLA-----EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A ++ L LL +K+V KI++A G KA +SGGG+LP H+
Sbjct: 357 AYFAGTELYYLTSFFYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHV 416
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 417 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEM 475
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG++ ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 476 DENGKITQGKLGLKGVLFIKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT-- 532
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 533 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVV 584
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ A+ I+ + +L + + LY + K +K F Q+ P ++
Sbjct: 585 PDFEKLQEWAQENGIIETNKDKLIENPRVYDLYRKEIKALNNTKNGFKSFEQVTPFILIS 644
Query: 456 EPFTV 460
+PF V
Sbjct: 645 KPFEV 649
>gi|421113459|ref|ZP_15573903.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410801233|gb|EKS07407.1| AMP-binding enzyme [Leptospira santarosai str. JET]
Length = 681
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 245/487 (50%), Gaps = 79/487 (16%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N QI+ + ++ + + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGL 296
Query: 153 IRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLHLLA-- 204
++++ ++ K R +G + + P S+ ++ ++ + + + L +LA
Sbjct: 297 FKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVLAGV 354
Query: 205 --------------------------------EKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
+K+V KI++A G KA +SGGG+LP
Sbjct: 355 FGVYLAGTELYYLTSFFYTVAGLAFLLNSFTLDKVVLSKIRAATGGQLKASISGGGALPR 414
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 415 HVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLT 473
Query: 292 A------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 339
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 474 EIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMINFKKT 532
Query: 340 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 399
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI
Sbjct: 533 ----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAI 582
Query: 400 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHV 453
+VPD E++ A+ I + +L + + + LY + K +K F Q+ P +
Sbjct: 583 VVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTPFIL 642
Query: 454 VDEPFTV 460
+ +PF V
Sbjct: 643 ISKPFEV 649
>gi|421097955|ref|ZP_15558632.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410799027|gb|EKS01110.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 681
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 152/444 (34%), Positives = 228/444 (51%), Gaps = 70/444 (15%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
+ LS+LP WHV+ER Y G YT VR+L+ DL +P +M S P ++E +Y+G
Sbjct: 219 RLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNG 278
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDW 187
I +I A R L R+++ ++ K R +G + + P S+ ++ +
Sbjct: 279 IYTRI-NDPAQTPAFRRGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIGSFFYGILMF 337
Query: 188 L--------------------WARI----ICAILWPLHLLA--------EKLVYKKIQSA 215
+ AR + + L+ + LA +K+V KI++A
Sbjct: 338 IQFLLTGPFTLTIFAGVLGVYLARTELYYLTSFLYVIAGLALLLNSFTLDKIVLAKIRAA 397
Query: 216 IGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 274
G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG
Sbjct: 398 TGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIA 457
Query: 275 NHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDE 322
T+++I + + N VL G KG+V V+G QVM+GYFKN AT +A+
Sbjct: 458 PKTKLQIRN-DNNAVLTEMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-T 515
Query: 323 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 382
DGW+NTGD+G I + L L GRAKDT+VL GENVEP+ +E S+
Sbjct: 516 DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTY 565
Query: 383 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW-- 440
I Q +VIGQDQ+ GAI+VPD E++ A+ I + +L + + LY + K
Sbjct: 566 ISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGINETNKDKLIENPKVYDLYRKEIKALN 625
Query: 441 TSKCSF----QIGPIHVVDEPFTV 460
+K F Q+ P ++ +PF V
Sbjct: 626 NTKNGFKSFEQVTPFILISKPFEV 649
>gi|183219760|ref|YP_001837756.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909895|ref|YP_001961450.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774571|gb|ABZ92872.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778182|gb|ABZ96480.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 682
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 243/483 (50%), Gaps = 71/483 (14%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVP----AENGDKFLSMLPPWHVYERACGY 91
L++ + T MP + M + I ++ +VP D+ LS+LP WH++ER Y
Sbjct: 181 LYTLIYTSGTTGMPKGVMLMHSNMIHQMHYVVPRVAKVTPDDRMLSILPVWHIFERVVEY 240
Query: 92 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSAARRVV 148
F G YT V L++D+Q+ +P +M S P V+E++Y+GI +I + RR +
Sbjct: 241 FAIINGGSTYYTKVTELRNDIQKARPTFMASAPRVWESIYNGIYTRINDPKQTPPVRRFL 300
Query: 149 ARALIRISFAYTAFKRIYEGFCLT---RNQKQPSYL--VALIDWLWARIICAILW----- 198
+ S Y A R +G+ + RN Q L V+++ L+ +
Sbjct: 301 FKVAYFFSKHYHAAIRFLKGWEVDYEGRNILQSLVLSIVSIVKLLFTGPFTLTILSLVAS 360
Query: 199 ------------PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
PL++LA +++V KI+ A G +A +SGGG+L H+D
Sbjct: 361 QFLVPEESPLKTPLYVLAGLGVLFNSFTLDRIVLSKIRQATGGHLRATLSGGGALQKHVD 420
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---- 290
F+ IG+ V GYG+TE+ PVI+AR ++GSVG + ++++I D N +
Sbjct: 421 AFFMDIGITVLEGYGMTETGPVISARTFDRPIMGSVGDIVPLSQVQIRDDAGNVLCHIDD 480
Query: 291 -------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 343
G KG+V ++G QVM+GY+KNP TK+ + D W+NTGDIG I
Sbjct: 481 KRNIIFGKLGVKGVVHLKGPQVMKGYYKNPETTKKTI-VDNWMNTGDIGMI--------- 530
Query: 344 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
L L GRAKDTIVL GENVEP+ +E S I+Q +V+GQDQ+ G+IIVPD
Sbjct: 531 -NFKKTLTLTGRAKDTIVLLGGENVEPVPIENKIDESPYIKQSMVVGQDQKVLGSIIVPD 589
Query: 404 KEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-KCSF----QIGPIHVVDEP 457
+ ++ A+ I + +L + K I E+R + S K F Q+ + ++ +P
Sbjct: 590 FDALIPWAEENGITEKNPEKLITHPKVIEFYKKEVRNFNSVKTGFKNFEQVQYVTLITKP 649
Query: 458 FTV 460
F V
Sbjct: 650 FEV 652
>gi|254443628|ref|ZP_05057104.1| AMP-binding enzyme, putative [Verrucomicrobiae bacterium DG1235]
gi|198257936|gb|EDY82244.1| AMP-binding enzyme, putative [Verrucomicrobiae bacterium DG1235]
Length = 638
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 215/412 (52%), Gaps = 43/412 (10%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYET 129
E D+ LS+LP WH YER S G +T++R + DDL+ +P M S P ++E
Sbjct: 220 EQDDRMLSILPVWHSYERVFHMIAVSNGCCTYFTSLRTIADDLKTVKPTIMASAPRLWEN 279
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
LY I K + S RR + RA AY + R+ +G +K+ I
Sbjct: 280 LYLRIMKNVKESHWIRRGLFRA------AYFS-SRMVKGSTFFFQRKEMDLTGRSIGETL 332
Query: 190 ARIICAIL-----WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
+++ + PL++ +V +K++ +G S K VSGGG+L H+D F+ IGV
Sbjct: 333 GKVLSGVFKIMLFLPLYVALNAVVLEKLRQIVGGSFKGTVSGGGALQPHVDEFFNYIGVP 392
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---------PAGS 294
V+ GYGLTE+SPV A R V+G+VG TE++I+D T E+L G
Sbjct: 393 VKEGYGLTETSPVAAVRTVPKLVIGTVGPLYPETELRILDLNTGEILYPNTKYRANGRGQ 452
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KG + ++G QVM+GY+KNP AT + L E GW NTGDIG L + G
Sbjct: 453 KGEIHLKGPQVMKGYYKNPEATDRVLKE-GWFNTGDIGMYT----------FNDCLKIMG 501
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R+KDTIVL GEN+EP+ +E S LI Q +V+GQD++ GA++VP E A +
Sbjct: 502 RSKDTIVLLNGENLEPIPIEAKLCESPLIDQCMVVGQDKKHLGALVVPSLEGFAAAGIKA 561
Query: 415 SIVHADASELSKEK-TISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
+ +EL+ K + L++ E +++ S K + + ++D+PF V
Sbjct: 562 ETL----TELAGSKEAVRLIHEEAKRFISFDNGFKKYEHVHSLKLLDKPFEV 609
>gi|386859826|ref|YP_006272532.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
gi|384934707|gb|AFI31380.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
Length = 643
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 211/395 (53%), Gaps = 25/395 (6%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ + D +P+ E G +S+LP WH +ER C Y + G+ + Y+ L D
Sbjct: 210 FQLDRINDYLPSLEPGQIMISILPLWHSFERTCEYIVALNGLSIAYSKPVGPILLKDFAA 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
PH +ISVP ++E + +GI K++ + S ++++ +++ Y + G L
Sbjct: 270 LNPHAIISVPRIWEGIRAGIIKKV-SESFLKKILFNFFLKVGIFYVKLMEKFLG--LVPL 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHI 233
++ ++L++ + I +++P L LV+KKI+ A+G G+SGGG+L ++
Sbjct: 327 YRKSNFLISFFVKIIYLIGLILVFPFKFLGHILVFKKIKKALGKRFIFGISGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+ V GYGLTE+ PV++ RR V +VG E K+VD N VLP G
Sbjct: 387 DYFFKAVGIVVLEGYGLTETGPVLSVRRLKSPVANTVGPLFPDIEYKVVDHNGN-VLPPG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + V+ QVM GYFK+ + T++ L DGW TGD+ + + +
Sbjct: 446 EKGELWVKSPQVMSGYFKDETMTREVLTRDGWFKTGDLVCATINDE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIVP+ E + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPIERALSKSVFIENVVVVGQDQKFLGAIIVPNFEVLEKWAIS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWTSKCSFQI 448
I + +L + ++ K+ SKC I
Sbjct: 556 SGIAFSSHDDLLSNELVN-------KFYSKCILDI 583
>gi|398336768|ref|ZP_10521473.1| long-chain-fatty-acid CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 681
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 244/485 (50%), Gaps = 75/485 (15%)
Query: 38 LFSFVLIDLNTWMP---IPKMTNF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T +P + K +N Q+ ++ ++ + + LS+LP WHV+ER Y
Sbjct: 178 LFTLIYTSGTTGLPKGVMLKHSNMMHQVNNVSPMLKIKADARLLSILPIWHVFERVVEYV 237
Query: 93 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 152
G YT VR+L+ DL +P +M S P ++E +Y+GI +I A + R L
Sbjct: 238 CIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGL 296
Query: 153 IRISFAYTAFK----RIYEGF---CLTRNQ----------------KQPSYLVALIDWLW 189
++++ +++ K R +G + RN P L L L
Sbjct: 297 FKLAYFFSSKKNQAVRFLKGIEVDYIGRNPIGSLFYGILMFVQLLLTGPFTLTVLAGALG 356
Query: 190 A-------RIICAILWPLHLLA--------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
A + + L+ + LA +++V KI++A G KA +SGGG+LP H+
Sbjct: 357 AYFAGTELHFLTSPLYTISGLAVLLNSFTLDRIVLAKIRAATGGQLKASISGGGALPRHV 416
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA- 292
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 417 DEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNGVLTEI 475
Query: 293 -----------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I +
Sbjct: 476 DETGNITQGKLGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT-- 532
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+V
Sbjct: 533 --------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVV 584
Query: 402 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGPIHVVD 455
PD E++ AK + +L + + LY + K +K F Q+ P ++
Sbjct: 585 PDFEKLQEWAKENGVNETSNEKLIENPKVYDLYRKEIKALNNTKNGFKSFEQVTPFILIA 644
Query: 456 EPFTV 460
+PF V
Sbjct: 645 KPFEV 649
>gi|398348984|ref|ZP_10533687.1| long-chain-fatty-acid CoA ligase [Leptospira broomii str. 5399]
Length = 685
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 233/466 (50%), Gaps = 72/466 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVP-------AENGDKFLSMLPPWHVYERA 88
LF+ + T MP + M + I + +VP ++ D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMEHVVPLILKKSMIKDDDSMLSILPVWHIFERV 239
Query: 89 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSAAR 145
Y S GI YT V +L++DL + +P +M S P V+E++Y+GI +I + R
Sbjct: 240 VEYSAISLGIATFYTKVSDLRNDLAKAKPSFMASAPRVWESIYTGIYNRINDPKQTPPVR 299
Query: 146 RVVARALIRISFAYTAFKRI-------YEG------FCL-----TRNQKQPSYLVALI-- 185
+ + S Y A R YEG F L R + V+LI
Sbjct: 300 KFLFNTAYLFSKNYHAAIRFLSGREVDYEGRNIIQSFILGIRAVIRLVLTGPFTVSLIAG 359
Query: 186 -DWLWAR-------IICAILWPLHLLA--------EKLVYKKIQSAIGISKAG-VSGGGS 228
+ + + +I +L + +L + +V KI+ A G G +SGGG+
Sbjct: 360 ASYFYVKTAHPNLPLIPGLLLTVAILGLIFNYKTLDAIVLSKIRQATGGRLRGTLSGGGA 419
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD----- 283
L H+D F+ IG+ V GYG+TE++PVI+ R ++GSVG+ + TE++I D
Sbjct: 420 LQRHVDNFFNDIGLLVLEGYGMTETAPVISVRHYDYPIIGSVGYIVPKTELQIRDDSGKV 479
Query: 284 ----AETNEVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 337
+ EVL G KGIV ++G QVM+GY+KNP ATK+ + DGW+NTGDIG+I
Sbjct: 480 LTHINDNKEVLAGRIGLKGIVHIKGPQVMKGYYKNPEATKKTI-SDGWINTGDIGFI--- 535
Query: 338 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 397
L L GRAKDT+VL GENVEP+ +E S I+Q +V GQDQ+ G
Sbjct: 536 -------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPYIKQSMVFGQDQKVLG 588
Query: 398 AIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS 442
AIIVPD E + + I D +L K + E+R++ S
Sbjct: 589 AIIVPDFENLKPWLEENGISAHDIKDLIDHPKVLEFYKREVREYNS 634
>gi|398343962|ref|ZP_10528665.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 685
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 163/489 (33%), Positives = 243/489 (49%), Gaps = 77/489 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVP-------AENGDKFLSMLPPWHVYERA 88
LF+ + T MP + M + I + +VP ++ D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMEHVVPLILKKSMIKDDDSMLSILPVWHIFERV 239
Query: 89 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSAAR 145
Y S GI YT V +L++DL + +P +M S P V+E++Y+GI +I + R
Sbjct: 240 VEYSAISLGIATFYTKVSDLRNDLAKAKPSFMASAPRVWESIYTGIYNRINDPKQTPPVR 299
Query: 146 RVVARALIRISFAYTAFKRI-------YEG------FCL-----TRNQKQPSYLVALI-- 185
+ + S Y A R YEG F L R + V+LI
Sbjct: 300 KFLFNTAYLFSKNYHAAIRFLSGREVDYEGRNIIQSFVLGVQAVIRLVLTGPFTVSLIAG 359
Query: 186 -DWLWAR-------IICAILWPLHLLA--------EKLVYKKIQSAIGISKAG-VSGGGS 228
+ + + +I +L + +L + +V KI+ A G G +SGGG+
Sbjct: 360 ASYFYIKTAHPNLPLIPGLLLAVAILGLIFNYKTLDAIVLSKIRQATGGRLRGTLSGGGA 419
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD----- 283
L H+D F+ IG+ V GYG+TE++PVI+ R ++GSVG+ + TE++I D
Sbjct: 420 LQRHVDNFFNDIGLLVLEGYGMTETAPVISVRHFDYPIIGSVGYVVPKTELQIRDDSGKV 479
Query: 284 ----AETNEVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 337
+ EVL G KG+V ++G QVM+GY+KNP ATK+ + DGW+NTGDIG+I
Sbjct: 480 LTHINDNKEVLAGRIGLKGVVHIKGPQVMKGYYKNPEATKKTI-SDGWINTGDIGFI--- 535
Query: 338 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 397
L L GRAKDT+VL GENVEP+ +E S I+Q +V GQDQ+ G
Sbjct: 536 -------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPYIKQSMVFGQDQKVLG 588
Query: 398 AIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-KCSFQ----IGPI 451
AIIVPD E + + I D +L K + E+R++ S K F+ + I
Sbjct: 589 AIIVPDFENLKPWLEENGISARDIKDLIDHPKVLEFYKKEVREYNSTKEGFKSFELVQHI 648
Query: 452 HVVDEPFTV 460
+ +PF +
Sbjct: 649 VIASKPFEI 657
>gi|187918454|ref|YP_001884017.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
gi|119861302|gb|AAX17097.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
Length = 643
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 214/394 (54%), Gaps = 31/394 (7%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ + + +P E G +S+LP WH +ER+C Y + GI + Y+ L D
Sbjct: 210 FQLDRISNYLPTLEPGKIMISILPLWHSFERSCEYIVTLNGIAVAYSKPIGPILLKDFAT 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
PH +ISVP ++E + GI K++ + S +R++ +++ Y K + GF
Sbjct: 270 LNPHAIISVPRIWEGIRIGIIKRV-SESFLKRILFNVFLKVGIIYVKLKEKFLGFVPV-- 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ +++V+ + ++ P L LV++KI+ A+G + G+SGGG+L ++
Sbjct: 327 YKKSNFVVSFFMKVIYLAGLILILPFKFLGYVLVFRKIKKALGKRFEFGISGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAAR---RPTCNVLGSVGHPINHTEIKIVDAETNEVL 290
D F++A+G+ V GYGLTE+ PV++ R RP N +VG + E ++VD++ N L
Sbjct: 387 DYFFKAVGIVVLEGYGLTETGPVLSVRCLRRPVAN---TVGPLLPDVEYRVVDSDGN-AL 442
Query: 291 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 350
P G KG + VR QVM GYFK+ + T++ L DGW TGD+ ++ +
Sbjct: 443 PPGEKGELWVRSPQVMSGYFKDEATTREVLTRDGWFKTGDLVCATMNNE----------I 492
Query: 351 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 410
+ GR KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIVP+ E +
Sbjct: 493 SIVGRTKDTIVLRGGENIEPEPIERALSKSVFIESVVVVGQDQKFLGAIIVPNFEVLEKW 552
Query: 411 AKRLSIVHADASELSKEKTISLLYGELRKWTSKC 444
A ++ + +L ++++ LY SKC
Sbjct: 553 AGSNGVLFSSRDDLLSNESVNKLY-------SKC 579
>gi|51245185|ref|YP_065069.1| long-chain-fatty-acid--CoA ligase [Desulfotalea psychrophila LSv54]
gi|50876222|emb|CAG36062.1| related to long-chain-fatty-acid--CoA ligase [Desulfotalea
psychrophila LSv54]
Length = 649
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 215/397 (54%), Gaps = 26/397 (6%)
Query: 52 IPK---MTNFQIRSLYDIVPA----ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA 104
+PK ++N I D +P D +LS+LP WH++ER Y + G L+Y+
Sbjct: 212 VPKGVQLSNKNIMHNVDCLPGIIRLTEEDLWLSILPSWHIFERTAEYVALAAGTTLVYST 271
Query: 105 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 164
VR L DL+RY+P + +VP V+E+LYS + + A + +LI S Y +R
Sbjct: 272 VRTLVQDLERYKPTLLATVPRVWESLYSKVDSGVRKKGAMAYRIFTSLIWCSSTYRRNRR 331
Query: 165 IYEGFCLTRNQ--KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG 222
+ L R +P+ LV A + L+ +L AEK + Q G +
Sbjct: 332 EF----LDRLPVFAKPNSLVRFGQKGVALVKMLFLYLPYLFAEKKLNVVRQRFGGRLRLA 387
Query: 223 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 282
+SGGGSL +++ + +A+G+++ YG+TE SP IA R C V G+VG + +T I++V
Sbjct: 388 ISGGGSLADYLEEWVDAVGIRIVNAYGMTECSPAIAGRGLDCRVYGTVGAGVTNTRIRLV 447
Query: 283 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 342
D + EV G +G+++V G QVM GY+KN ++ +DG+ TGD+G
Sbjct: 448 DDDGLEV-SQGKEGLIEVVGDQVMGGYYKNDVGNIESFTDDGFFRTGDLG---------- 496
Query: 343 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
R G LVL GRAKD IVLS+GEN++P +E A ++ +++GQD++ GA++V
Sbjct: 497 RRTISGDLVLTGRAKDIIVLSSGENIDPSRIESAISVFPFVQDAILVGQDKKGLGALLVA 556
Query: 403 DKEEVL-MAAKRLSIVHADASELSKE-KTISLLYGEL 437
D+EE+L A R S + + EL K+ K + L+ E+
Sbjct: 557 DREELLKYADSRFSHLRKASQELLKDNKVLELIRKEM 593
>gi|386347279|ref|YP_006045528.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
gi|339412246|gb|AEJ61811.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
Length = 630
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 198/356 (55%), Gaps = 21/356 (5%)
Query: 57 NF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDL 112
NF Q++ + ++ GD +LS+LP WH +ER Y S + Y+ R + D+
Sbjct: 206 NFLHQVKGVPILLKVGPGDIWLSVLPVWHSFERMMQYVALSSASAIAYSKPIGRIMLQDM 265
Query: 113 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 172
+P +M SVP ++E + GI + I S + + +A + + AY F + +G L
Sbjct: 266 ATLKPTWMASVPRIWEGIRKGILQTIKKESPLVQAIFQASLVVGRAYAFFTHMVKG-ELP 324
Query: 173 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
R + +P ++D + I +LWP LA LV++K+ +G AG+SGGG+LP
Sbjct: 325 RFKWRPR----ILDRVIGIIPFLLLWPFKQLAHLLVFRKLHRKLGGRFVAGISGGGALPP 380
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
+D F++AI + V GYGLTE++PV+A R V +VG TEI+I D E N VLP
Sbjct: 381 EVDGFFDAIRITVLEGYGLTEAAPVLAVRSYYHPVPHTVGPVFPDTEIQIRDEEGN-VLP 439
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G +G + RG QVM GY K P T++ LDE+GWLNTGD+G + + L
Sbjct: 440 PGRQGTIFARGGQVMLGYLKAPEETRKVLDEEGWLNTGDLGMLTWDNE----------LA 489
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
+ GRAKDTIVL GENVEP LE+A L+ +V+GQD++ G +I D++ +
Sbjct: 490 ITGRAKDTIVLRGGENVEPAPLEQALKEHPLVAHAMVVGQDEKYLGVLIFVDQDSL 545
>gi|203288031|ref|YP_002223046.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
gi|201085251|gb|ACH94825.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
Length = 643
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 211/395 (53%), Gaps = 25/395 (6%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ + D +P+ E G +S+LP WH +ER C Y + G+ + Y+ L D
Sbjct: 210 FQLDRINDYLPSLEPGQIMISILPLWHSFERTCEYIVALNGLSIAYSKPVGPILLKDFAA 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
PH +ISVP ++E + +GI K++ + S ++++ + + Y F + G L
Sbjct: 270 LNPHAIISVPRIWEGIRAGIIKKV-SESFLKKILFNFFLNVGIFYVKFMEKFLG--LVPI 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHI 233
++ ++L++ + I +++P L LV+KKI+ A+G G+SGGG+L ++
Sbjct: 327 YRKSNFLISFFMKIIYLIGLILIFPFKFLGHILVFKKIKKALGKRFIFGISGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+ V GYGLTE+ PV++ RR V +VG E K+VD N VLP G
Sbjct: 387 DYFFKAVGIVVLEGYGLTETGPVLSVRRLKSPVANTVGPLFPDIEYKVVDHNGN-VLPPG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + V+ QVM GYFK+ + T++ L DGW TGD+ + + +
Sbjct: 446 EKGELWVKSPQVMSGYFKDETMTREVLTRDGWFKTGDLVCATINDE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIVP+ E + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPIERALSKSVFIENVVVVGQDQKFLGAIIVPNFEVLEKWAIS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWTSKCSFQI 448
I + +L + ++ K+ SKC I
Sbjct: 556 SGIAFSSHDDLLSNELVN-------KFYSKCILDI 583
>gi|398346500|ref|ZP_10531203.1| long-chain-fatty-acid--CoA ligase [Leptospira broomii str. 5399]
Length = 685
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 229/462 (49%), Gaps = 72/462 (15%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
FQ+RS+ I+ D+ +S+LP WH++ER Y G Y+ V++LK +L ++P
Sbjct: 202 FQVRSVSPILEITEKDRAISILPIWHIFERFLEYCFLHVGGTTYYSNVQDLKQNLTDFKP 261
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN--- 174
+ + P V+E + +GI ++ R+ R L ++++ Y+ K + F L
Sbjct: 262 TFFGAAPRVWEMICNGILARMTDPDRTSRL-GRILFKLAYTYSEKKNEAKAFFLGNELDL 320
Query: 175 QKQPSYLVAL------IDWLW--------ARIICAILWPLHLLAE--------------- 205
+ + S+ L ++L+ +CA L P AE
Sbjct: 321 KGRSSFATFLKGLRMAFEYLFFGPFTLSAISFLCAALIPFGYAAEEIKILLYTIGVIGLL 380
Query: 206 -------KLVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 256
+LV KI+ I G K VSGGG+LP +D +G+++ GYG+TE+SPV
Sbjct: 381 FNSFMLDQLVLSKIRKDIVGGFLKTSVSGGGALPNRVDRTLNHLGIRLLEGYGMTETSPV 440
Query: 257 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQ 304
I+ RR V+GSVGH + T ++I E NEVL G KG+V G
Sbjct: 441 ISIRRTDKFVIGSVGHILPKTRLQI-RTEKNEVLSEIDENGKFTKGKPGQKGVVFASGPH 499
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
+M+GY+KNP T AL+ GW+NTGDIG ++ + + L L GRAK+TIVL
Sbjct: 500 IMKGYYKNPDITADALNA-GWMNTGDIGIVSYNRT----------LTLAGRAKETIVLRG 548
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASE 423
GENVEP+ +E S I Q +VIGQDQ+ GAIIVPD E ++ AK I V +
Sbjct: 549 GENVEPVPIEAKLQVSKYISQCMVIGQDQKNLGAIIVPDFESLIGWAKENYIPVDSIQEL 608
Query: 424 LSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
L + + I L E++ + K Q+ P ++ +PF V
Sbjct: 609 LQRRQVIDLYRSEIKALNNARSGFKSFEQVTPFLLIVKPFEV 650
>gi|325971583|ref|YP_004247774.1| long-chain-fatty-acid--CoA ligase [Sphaerochaeta globus str. Buddy]
gi|324026821|gb|ADY13580.1| Long-chain-fatty-acid--CoA ligase [Sphaerochaeta globus str. Buddy]
Length = 639
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 196/342 (57%), Gaps = 30/342 (8%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLY 131
++LS+LP WH +ER Y I S + Y+ L DL PH+M SVP ++E +
Sbjct: 233 RWLSVLPVWHSFERILQYVIISNASTIAYSKPLGSILLADLAVVNPHWMGSVPRIWEAVK 292
Query: 132 SGIQKQIFTSSAARRVVARAL----IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
+G+ F S + +A+ L ++I+ Y+ K + G T ++ ++D
Sbjct: 293 AGV----FASMKNKSPIAKGLFAFFVQIARLYSHNKDLLLGEVATFQKRN-----RVLDV 343
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
L + + +L+PL+ L KLV+ K++ +G + AGVSGGGSL +DLF+ +IG+K+
Sbjct: 344 LVSFLPTVLLYPLYKLGNKLVFSKVKHKLGKNFIAGVSGGGSLSEGVDLFFASIGIKLLD 403
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+PV+A R P + + + TE++IVD EV P G KG+++VRG QVM
Sbjct: 404 GYGLTESAPVVAVR-PLSHGVKRTITALEGTEVRIVDETGIEVKP-GQKGVIQVRGPQVM 461
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
+GY+K T + L +DGWL+TGD+G W G + GRAKDTIVLS G
Sbjct: 462 KGYYKRQDLTDRVLSKDGWLDTGDLGMWTHK-----------GEFAIRGRAKDTIVLSGG 510
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
EN+EP+ +E S I VV+GQDQ+ GA+IV +K+ +
Sbjct: 511 ENLEPVPIEAKLCESEFIESAVVLGQDQKYLGALIVLNKKRI 552
>gi|333993405|ref|YP_004526018.1| long-chain-fatty-acid--CoA ligase [Treponema azotonutricium ZAS-9]
gi|333737141|gb|AEF83090.1| long-chain-fatty-acid--CoA ligase [Treponema azotonutricium ZAS-9]
Length = 644
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 207/376 (55%), Gaps = 20/376 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 116
Q+ + + + G+ +LS+LP WHV+ERA Y + Y+ + L D +
Sbjct: 221 QVPRFHLVFDTKPGEIWLSVLPVWHVFERAIEYVALYHKNAIAYSKPISSVLMADFANIK 280
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
PH+M++VP V+E + GI + + + + Y F+ + G + +
Sbjct: 281 PHWMVAVPRVWEAVMDGIYRSVKLMGKFQEFFFNFFVSFGLMYAYFRDLAFGLIPNFHGR 340
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
V +D + +L P+ LA +V+++++ +G +AG+SGGG+LP +D
Sbjct: 341 -----VRAVDAVLGFFPWLLLAPVRGLAYLIVFRRLKLRLGGRFRAGISGGGALPARVDH 395
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP-INHTEIKIVDAETNEVLPAGS 294
F+ A+G+++Q GYGLTE+SP+++ R+ + G++G ++ TE +I+D + E LP GS
Sbjct: 396 FFNAVGLRLQEGYGLTETSPIVSVRQYRKSRRGTIGQILVDDTEFRILDDKGRE-LPPGS 454
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
GI+ VRG QVM+GY+K P T + L DGWLNTGDI H+R G L L G
Sbjct: 455 SGILYVRGPQVMKGYYKKPELTAEVLSADGWLNTGDIA----MHTRD------GELRLTG 504
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
RAKDTIVL GENVEP+ +E S I Q VV+GQDQ+ A+IVP ++ V+ A+
Sbjct: 505 RAKDTIVLRGGENVEPVPIENKLKESPRIGQCVVLGQDQKYLAALIVPVQDAVMAFAEEN 564
Query: 415 SIVHADASELSKEKTI 430
+I D L ++ I
Sbjct: 565 NIPIVDYELLLQQPEI 580
>gi|333996558|ref|YP_004529170.1| AMP-binding domain-containing protein [Treponema primitia ZAS-2]
gi|333740669|gb|AEF86159.1| AMP-binding enzyme family protein [Treponema primitia ZAS-2]
Length = 637
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 206/371 (55%), Gaps = 19/371 (5%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISV 123
+ + GD +LS+LP WHV+ER+ Y IF G + Y+ + L D Q +P +M+SV
Sbjct: 220 VFETKTGDIWLSVLPVWHVFERSIEYVIFYLGNGIAYSKPISSVLLPDFQNIRPQWMVSV 279
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P V+E++ + + + + + Y F+ + G L + L A
Sbjct: 280 PRVWESIMDWTNRNVKQQGWFWKNWFNFFVNLGIMYNYFRDLTFGL-LPNFHGRIRVLDA 338
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
+I + ++C P LA LV+++++ +G +AG+SGGGSLP+ +DLF+ A+G+
Sbjct: 339 IIGFFPWVLLC----PARGLAWLLVFRRVKKRLGGRFRAGISGGGSLPVKVDLFFNAVGL 394
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 302
++Q GYGLTE+SP++A RR +VG + TE +IVD + +L G+ G ++VRG
Sbjct: 395 RLQEGYGLTETSPIVAVRRYKAARRNTVGQVLLDTECRIVDNK-GAILQPGNNGHLQVRG 453
Query: 303 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
QVM+GY++ P T + L +DGW+ TGDI + + + + GRAKDTIVL
Sbjct: 454 GQVMKGYYRKPEETAKVLFDDGWIETGDIAMMTYDNE----------VRITGRAKDTIVL 503
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 422
GENVEP+ +E S + Q +V+GQDQ+ A+IVP +E ++ A+ +I D
Sbjct: 504 RGGENVEPIPIELKIQESPWVAQCMVVGQDQKYLAALIVPVQEAIMGFAEENNIPIVDYD 563
Query: 423 ELSKEKTISLL 433
L ++ I+ L
Sbjct: 564 LLLQQPEINEL 574
>gi|203284497|ref|YP_002222237.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
gi|201083940|gb|ACH93531.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
Length = 643
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 211/395 (53%), Gaps = 25/395 (6%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ + D +P+ E G +S+LP WH +ER C Y + G+ + Y+ L D
Sbjct: 210 FQLDRINDYLPSLEPGQIMISILPLWHSFERTCEYIVALNGLSIAYSKPVGPILLKDFAA 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
PH +ISVP ++E + +GI K++ + S ++++ +++ Y + G L
Sbjct: 270 LNPHAIISVPRIWEGIRAGIIKKV-SESFLKKILFNFFLKVGIFYVKLMEKFLG--LVPI 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHI 233
++ ++L++ + I +++P L LV+KKI+ A+G G+SGGG+L ++
Sbjct: 327 YRKSNFLISFFVKIIYLIGLILIFPFKFLGHILVFKKIKKALGKRFIFGISGGGALVDYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+ V GYGLTE+ PV++ RR V +VG E K+VD N VLP G
Sbjct: 387 DYFFKAVGIVVLEGYGLTETGPVLSVRRLKSPVANTVGPLFPDIEYKVVDHNGN-VLPPG 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + V+ QVM GYFK+ + T++ L DGW TGD+ + + +
Sbjct: 446 EKGELWVKSPQVMSGYFKDETMTREVLTRDGWFKTGDLVCATINDE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIVP+ E + A
Sbjct: 496 GRSKDTIVLRGGENIEPEPIERALSKSVFIENVVVVGQDQKFLGAIIVPNFEVLEKWAIS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWTSKCSFQI 448
I + +L + ++ K+ SKC I
Sbjct: 556 SGIAFSSHDDLLSNELVN-------KFYSKCILDI 583
>gi|359688978|ref|ZP_09258979.1| long-chain-fatty-acid CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418756346|ref|ZP_13312534.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384116017|gb|EIE02274.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
Length = 685
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 237/489 (48%), Gaps = 77/489 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-------ENGDKFLSMLPPWHVYERA 88
LF+ + T MP + M + + + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMVHQMEYVVPLILKKSLLRDDDSMLSILPVWHIFERV 239
Query: 89 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSAAR 145
Y S GI YT V +L++DL + +P +M S P V+E++Y+GI +I + R
Sbjct: 240 VEYSAISLGISTFYTKVADLRNDLAKARPSFMASAPRVWESIYTGIYNKINDPKQTPPVR 299
Query: 146 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------PSYLVALIDW 187
+ + S Y A R G + + + V+LI
Sbjct: 300 KFLFNTAYLFSKNYNAGIRFLTGKEVDYENRSIFKSLALGIKAIGQVVLFGPFTVSLISA 359
Query: 188 LWARII------CAILWPLHLLA------------EKLVYKKIQSAIGISKAG-VSGGGS 228
+ I A L P+ L + +V KI+ A G G +SGGG+
Sbjct: 360 VGYSYIKMYKPELAFLAPVLLTIAILGLIFNFKTLDTIVLSKIRQATGGRLRGTLSGGGA 419
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN- 287
L H+D F+ IG+ V GYG+TES+PVI+ R ++GSVG+ + TE+++ D N
Sbjct: 420 LQRHVDNFFNDIGLLVLEGYGMTESAPVISVRHYDHPIIGSVGYIVPKTELQLRDDHGNV 479
Query: 288 --------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 337
++L G KGIV ++G QVM+GY+KNP TK+ + DGWLNTGDIG+I
Sbjct: 480 LTHINDQRQLLAGKLGVKGIVHIKGPQVMKGYYKNPEVTKKTI-VDGWLNTGDIGFINFK 538
Query: 338 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 397
H+ L L GRAK+T+VL GENVEP+ +E S I+Q +V GQDQ+ G
Sbjct: 539 HT----------LTLTGRAKETVVLLGGENVEPVPIENRMDESPYIKQSMVFGQDQKVLG 588
Query: 398 AIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-KCSFQ----IGPI 451
AIIVPD E + + I D +L K I E+R++ S K F+ I +
Sbjct: 589 AIIVPDLEVLQPWLAQNGIQAKDIKDLIDNPKVIEFFKKEIREYNSTKHGFKSFELIQHV 648
Query: 452 HVVDEPFTV 460
+ +PF +
Sbjct: 649 VIAQKPFEI 657
>gi|418748591|ref|ZP_13304883.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|404275660|gb|EJZ42974.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 678
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 237/489 (48%), Gaps = 77/489 (15%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-------ENGDKFLSMLPPWHVYERA 88
LF+ + T MP + M + + + +VP + D LS+LP WH++ER
Sbjct: 173 LFTLIYTSGTTGMPKGVMLMHSNMVHQMEYVVPLILKKSLLRDDDSMLSILPVWHIFERV 232
Query: 89 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSAAR 145
Y S GI YT V +L++DL + +P +M S P V+E++Y+GI +I + R
Sbjct: 233 VEYSAISLGISTFYTKVADLRNDLAKARPSFMASAPRVWESIYTGIYNKINDPKQTPPVR 292
Query: 146 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------PSYLVALIDW 187
+ + S Y A R G + + + V+LI
Sbjct: 293 KFLFNTAYLFSKNYNAGIRFLTGKEVDYENRSIFKSLALGIKAIGQVVLFGPFTVSLISA 352
Query: 188 LWARII------CAILWPLHLLA------------EKLVYKKIQSAIGISKAG-VSGGGS 228
+ I A L P+ L + +V KI+ A G G +SGGG+
Sbjct: 353 VGYSYIKMYKPELAFLAPVLLTIAILGLIFNFKTLDTIVLSKIRQATGGRLRGTLSGGGA 412
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN- 287
L H+D F+ IG+ V GYG+TES+PVI+ R ++GSVG+ + TE+++ D N
Sbjct: 413 LQRHVDNFFNDIGLLVLEGYGMTESAPVISVRHYDHPIIGSVGYIVPKTELQLRDDHGNV 472
Query: 288 --------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 337
++L G KGIV ++G QVM+GY+KNP TK+ + DGWLNTGDIG+I
Sbjct: 473 LTHINDQRQLLAGKLGVKGIVHIKGPQVMKGYYKNPEVTKKTI-VDGWLNTGDIGFINFK 531
Query: 338 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 397
H+ L L GRAK+T+VL GENVEP+ +E S I+Q +V GQDQ+ G
Sbjct: 532 HT----------LTLTGRAKETVVLLGGENVEPVPIENRMDESPYIKQSMVFGQDQKVLG 581
Query: 398 AIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-KCSFQ----IGPI 451
AIIVPD E + + I D +L K I E+R++ S K F+ I +
Sbjct: 582 AIIVPDLEVLQPWLAQNGIQAKDIKDLIDNPKVIEFFKKEIREYNSTKHGFKSFELIQHV 641
Query: 452 HVVDEPFTV 460
+ +PF +
Sbjct: 642 VIAQKPFEI 650
>gi|268680079|ref|YP_003304510.1| AMP-dependent synthetase and ligase [Sulfurospirillum deleyianum
DSM 6946]
gi|268618110|gb|ACZ12475.1| AMP-dependent synthetase and ligase [Sulfurospirillum deleyianum
DSM 6946]
Length = 629
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 195/350 (55%), Gaps = 13/350 (3%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
+ +R + ++ E+ D ++S+LP WH++ERA Y S G +Y+ ++ DL+ Y+P
Sbjct: 205 YNVREIPPLIALESADVWVSILPSWHIFERAAEYVALSGGCCTVYSTIKTFAADLEHYKP 264
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
+ +VP ++E++Y+ I + + + + + LI IS AY +RI + L QK+
Sbjct: 265 TIVATVPRLWESMYTKINTTLEKTDPKKAKIFKKLIAISVAYKRAERILKD-ELPCFQKR 323
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFY 237
++L D A + L+P H A+K + + G + VSGGG+LP +D +
Sbjct: 324 SAFLTCK-DKSIAFVSRFALYPFHAFAQKKLSLVQEKFGGRLRLAVSGGGALPDFLDAWI 382
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
+AIG+++ YG++E +PVIA R CN ++G P+ T +KIV E L AG G
Sbjct: 383 DAIGIRIVNAYGMSECAPVIAGRALQCNTFSTLGLPVQGTMLKIVSKE-GVALEAGEIGE 441
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
+ V+G QVMQGY+KNP ++ E+G+ TGD+G + G LV+ GR+K
Sbjct: 442 IWVKGEQVMQGYYKNPQENTKSFSEEGFFKTGDLGKVT----------LNGELVITGRSK 491
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
+ IVL+ GENV+P +E I+ +++G ++ GA+IVPD E++
Sbjct: 492 EIIVLANGENVDPSRIESTLSMLPFIQDAILVGHSKKGLGALIVPDFEKL 541
>gi|359689681|ref|ZP_09259682.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749980|ref|ZP_13306268.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418759027|ref|ZP_13315207.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384113518|gb|EID99782.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274865|gb|EJZ42183.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 637
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 217/391 (55%), Gaps = 46/391 (11%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPAE--NGDKFLSMLPPWHVYER----AC 89
LF+ + T P +P +T+ I S + +P + G++ LS+LP WH +ER C
Sbjct: 178 LFTLIYTAGTTGRPKGVP-LTHKNIMSQINRIPIKLAAGERILSILPVWHSFERMFEMVC 236
Query: 90 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 149
YF G Y++VR LK+DL++ +P +M S P ++E++Y GI + SS+ ++ +
Sbjct: 237 IYF----GAGTYYSSVRTLKEDLKKVKPTFMASAPRLWESVYQGIYATVAKSSSVKQSLF 292
Query: 150 RALIRISFAYTAFKRIYEGF---CLTRNQKQPSYLVALIDWLW--ARIICAILWPLHLLA 204
A + S + KR + GF LT S V + L II A L L
Sbjct: 293 HAALFFSSNIESAKR-WLGFRELDLTGRSAIVSLFVGIFKVLQYILNIIPATLLDL---- 347
Query: 205 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 263
+V KKI+ A G K VSGGG+LP+H+D F+ AIG++V GYGLTE+SPVI+ R
Sbjct: 348 --IVLKKIRQATGGRLKGTVSGGGALPIHVDKFFNAIGIQVLEGYGLTETSPVISVRILN 405
Query: 264 CNVLGSVGHPINHTEIKIVDAETNEVL-------PAG--SKGIVKVRGSQVMQGYFKNPS 314
V+G+VG T +++VD T+++L P G KG + V+G QVM GY+ +P
Sbjct: 406 EAVMGTVGPLYKGTSLRVVDPNTSKILWTTEEGGPKGYAVKGEIHVKGDQVMSGYYHDPE 465
Query: 315 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 374
T++ ++ DGW NTGD+G + + C L + GR K+TIVL GENVEP+ +E
Sbjct: 466 NTRKVMN-DGWFNTGDLGMMTYND-------C---LKIVGRTKETIVLLGGENVEPVPIE 514
Query: 375 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+S I Q +VIGQDQ+ A+IVP+ E
Sbjct: 515 NILSQSEFILQCMVIGQDQKYLSALIVPNPE 545
>gi|408792933|ref|ZP_11204543.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408464343|gb|EKJ88068.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 632
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 202/359 (56%), Gaps = 32/359 (8%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
FQ+++L + + GD+ LS+LP WH++ER F G Y++VR LK+DL+ +P
Sbjct: 209 FQLQNL--PIRLQKGDRTLSILPIWHIFERIFEIFSLYYGACTYYSSVRTLKEDLRFVKP 266
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ-- 175
H+M S P ++E++YSGI + SS ++ + + + + + +++ G L +
Sbjct: 267 HFMASAPRLWESIYSGILGTLAKSSPVKQKMFQLAMFFAKRFFISRQVITGNVLDIHPVV 326
Query: 176 --KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
KQ + + L+ + +I P HL+ + LV KI+ A G + SGGG+LP H
Sbjct: 327 FWKQS---IRFVYHLYRFFLVSI--P-HLVFDFLVLSKIRKATGGELRGSCSGGGALPYH 380
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
+D F+ IG+ V GYG+TE++PV+A R + GSVG T++++VD T EV
Sbjct: 381 VDEFFNTIGIPVLEGYGMTETAPVLAMRTFEEIIPGSVGKIFPKTKLRLVDLHTGEVFLD 440
Query: 293 --------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 344
G KG + V+G QVM GY+KNP AT + L DGWLNTGD+G +H+
Sbjct: 441 TEVGKFVFGRKGEIHVKGKQVMAGYYKNPDATNRVL-VDGWLNTGDLGIFTANHN----- 494
Query: 345 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
L + GR+K+TIVL GENVEP+ +E L S I Q +V+GQDQ+ ++ P+
Sbjct: 495 -----LRIVGRSKETIVLLGGENVEPVPIESKILESEWIDQCMVVGQDQKYLSVLVYPN 548
>gi|449123801|ref|ZP_21760123.1| hypothetical protein HMPREF9723_00167 [Treponema denticola OTK]
gi|448944054|gb|EMB24936.1| hypothetical protein HMPREF9723_00167 [Treponema denticola OTK]
Length = 641
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 203/379 (53%), Gaps = 19/379 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 116
Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L D+ +
Sbjct: 219 QLLELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSILLADMLKIN 278
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P SVP ++E +Y GI K + + + + KR G C QK
Sbjct: 279 PTLFPSVPRIWEAVYDGIFKVMKKRGRPLYYLFLFFVDVGIKTMRLKRRVTGQC-PHFQK 337
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ ++ ++ L ++C + P++ + + L+Y+ I+ G KAGVSGGG+LP ++D
Sbjct: 338 RSKFIYPILAIL--PLLC--IAPMYYIGDLLIYRTIRKKFGKCFKAGVSGGGALPPNVDE 393
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ A+ + V GYG+TE++PVI+ R V G++G P+ E KI+D NE LP K
Sbjct: 394 FFWAVRINVMEGYGITETAPVISVRPMPRPVFGTLGKPLACFESKIIDKNGNE-LPHNRK 452
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G++ V+G V +GY+K+P T + +D+DGW +TGD+ + G L+L+GR
Sbjct: 453 GLLLVKGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTIDGELILKGR 502
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE + A
Sbjct: 503 RKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVHKENLQAWAANNG 562
Query: 416 IVHADASELSKEKTISLLY 434
+ + SEL + + +Y
Sbjct: 563 LRNVPVSELVHDSNVQKMY 581
>gi|398334342|ref|ZP_10519047.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 583
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 212/397 (53%), Gaps = 20/397 (5%)
Query: 38 LFSFVLIDLNTWMPIPKM-TNFQIRSLYDIVPAENG--DKFLSMLPPWHVYERACGYFIF 94
LF+ + T P M T+ + S +P E G D+FLS+LP WH +ER
Sbjct: 186 LFTIIYTSGTTGEPKGVMLTHANMISQLRNIPIEIGPKDRFLSILPVWHSFERVFQMGTI 245
Query: 95 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 154
+ G YT +RN+K+DL +P +M S P ++E ++ GIQ +I + S +R++ ++
Sbjct: 246 ATGAGQYYTNIRNIKEDLLIVKPTFMASAPRLWENIFHGIQSKIQSGSTLKRILFKSAYF 305
Query: 155 ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQS 214
+ ++G L + + L +L + + + I +++ + +V KKI+
Sbjct: 306 CALKVQRALNFFKGNELDLEGR--NILKSLCMFGQSVLNIVIFSIPYMILDLIVLKKIRQ 363
Query: 215 AIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 273
A G G VSGGG+LP HID F+ IG+ + GYGLTE+SP +A R P V+GSVG
Sbjct: 364 ATGGKLRGTVSGGGALPFHIDEFFNVIGIPLFEGYGLTETSPGLAFRTPDHLVIGSVGPL 423
Query: 274 INHTEIKIVDAETNEVL---PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 330
EI + D E +L G KG V VRG Q+M+GY+K P T + + +DGW NTGD
Sbjct: 424 FPEVEILLKDVENGNILYPPQKGVKGEVHVRGPQIMKGYYKRPDVTAKVI-QDGWFNTGD 482
Query: 331 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 390
+G I +++ L + GR K+T+VL GEN+EP+ +E +S I Q++V+G
Sbjct: 483 LGLITYNNT----------LKIVGRTKETVVLLNGENIEPVPIENKLAQSPFIDQVMVVG 532
Query: 391 QDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
QDQ+ A+++P + L + LS ++ K
Sbjct: 533 QDQKFLTALVLPVLDRFLGLRENLSGTRGESDRERKN 569
>gi|258404180|ref|YP_003196922.1| AMP-dependent synthetase and ligase [Desulfohalobium retbaense DSM
5692]
gi|257796407|gb|ACV67344.1| AMP-dependent synthetase and ligase [Desulfohalobium retbaense DSM
5692]
Length = 630
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 209/373 (56%), Gaps = 14/373 (3%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 118
+++L D++ + D++LS+LP WH++ER Y SRG ++Y+++R DL+R++P
Sbjct: 207 NVQNLPDLIRLTSEDRWLSILPTWHIFERTVEYVALSRGSCIVYSSIRTFAADLERFKPT 266
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+ +VP ++E+LY + + S + + + L+ +S ++ R G L R + +P
Sbjct: 267 LVATVPRIWESLYGKVNAALKKESPRKARLFQFLVSVSSSFRLNSRRISG-RLPRFEHEP 325
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
+ V L A L PL+ +A + + G + +SGGGSLP +D + +
Sbjct: 326 WWRV-LPRKARALACVVALAPLYAVARAKLAPVKKKFGGRLRLAISGGGSLPPFLDEWID 384
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
AIG+++ YG+TE SP IA R C G++G P +TE++I + EV P G++G +
Sbjct: 385 AIGIRITNAYGMTECSPGIAGRGLDCRTFGTLGPPFPYTEVRIAGQDDIEV-PTGTEGEI 443
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+VRG QV GY+ N A ++ DG+ TGD+G + G LV+ GRAK+
Sbjct: 444 QVRGPQVFHGYYHNNEANAESFTPDGFFRTGDLG----------KKTLNGELVITGRAKE 493
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM-AAKRLSIV 417
IVL++GEN++P +E ++ V++GQD++ GA+IVPD E++ A++ + V
Sbjct: 494 IIVLASGENIDPTNIEATISTFPFVQDAVLVGQDKKGLGALIVPDLEKLRQYVAEQYNHV 553
Query: 418 HADASELSKEKTI 430
+A ++ ++K I
Sbjct: 554 VNEAGDVLQDKQI 566
>gi|381180251|ref|ZP_09889093.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
gi|380767812|gb|EIC01809.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
Length = 636
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 195/344 (56%), Gaps = 28/344 (8%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYET 129
GD+ + +LP WH ++RA Y + ++ + Y+ L DL+ P + +VP V+E
Sbjct: 226 GDRGMMVLPVWHAFQRAVEYVVLNQSATICYSKPVGPVLLADLKALNPQVLPAVPRVFEA 285
Query: 130 LYSGIQKQIF-TSSAARRV----VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+Y GI + + T R+ VA AL F R R + P+++
Sbjct: 286 VYDGIYRNMRKTGGIVLRLFNFFVAIALFHSKLDRVLFDRTTRYGMDKRWLQWPAFV--- 342
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
I WL +C +P+ LL ++++KI+ +G + ++GV+GGG+LP +D F+ AIG+K
Sbjct: 343 IPWL----VC---YPIKLLGGAMIFRKIRKMLGTNFRSGVAGGGALPPAVDKFFWAIGIK 395
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
+ GYGLTE++P+I+ R VLG+VG + ++VD T + L G KG+++V+G
Sbjct: 396 LVEGYGLTETAPIISVRPIDRPVLGNVGSAVRGISARVVDPLTRKPLKRGKKGVLEVKGG 455
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM+GY+K P T +A+DE+GW +TGD+ + ++ +VL GR KDTIV +
Sbjct: 456 TVMKGYYKQPELTAKAIDENGWFDTGDLARLTANNE----------IVLCGRVKDTIVQT 505
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
GENVEPL +E S I+ VV+GQDQR A++VP++ EV
Sbjct: 506 GGENVEPLPIEMKMQESRFIKTAVVLGQDQRYLAALVVPEQSEV 549
>gi|398342591|ref|ZP_10527294.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 545
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 226/462 (48%), Gaps = 72/462 (15%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
FQ+ S+ I+ D+ +S+LP WH++ER Y G Y+ + +LK +L ++P
Sbjct: 56 FQVSSVSPILEITENDRAISILPIWHIFERFMEYCFLHVGGTTYYSNIPDLKQNLTDFKP 115
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR--NQ 175
+ + P V+E + +GI ++ R+ R L ++++ Y+ K + F L +
Sbjct: 116 TFFGAAPRVWEMICNGILTRMTDPDRTSRL-GRILFKLAYTYSEKKNEAKAFFLGNELDL 174
Query: 176 KQPSYLVALIDWLWA---------------RIICAILWPLHLLAEK-------------- 206
K S+ ++ + +CA L P A++
Sbjct: 175 KGRSFFGTILKGIRMTFEYSFFGPFTLSSISFLCATLIPFEYAAKEIKILLYTIGVIGLL 234
Query: 207 --------LVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 256
LV KI+ I G K VSGGG+LP +D +G+++ GYG+TE+SPV
Sbjct: 235 FNSFTLDLLVLSKIRRDIVGGFLKTSVSGGGALPNRVDRTLNHLGIRLLEGYGMTETSPV 294
Query: 257 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQ 304
I+ RR V+GSVGH + T ++I E NEVL G KGIV G
Sbjct: 295 ISLRRMDKFVIGSVGHILPKTRLQI-RTEKNEVLSEIDENGRFTKGKPGQKGIVFASGPH 353
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
+M+GY+KNP T AL+ GW+NTGDIG ++ + + L L GRAK+TIVL
Sbjct: 354 IMKGYYKNPDITADALNA-GWMNTGDIGIVSYNRT----------LTLAGRAKETIVLRG 402
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASE 423
GENVEP+ +E S I Q +VIGQDQ+ GAIIVPD E ++ AK I V ++
Sbjct: 403 GENVEPVPIEARLQVSKYISQCMVIGQDQKNLGAIIVPDFESLIAWAKENYIPVDSEQEL 462
Query: 424 LSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 460
L +++ I L E++ + K Q+ P + +PF V
Sbjct: 463 LRRKQVIDLYRSEIKALNNARSGFKSFEQVTPFLFIVKPFEV 504
>gi|381181399|ref|ZP_09890233.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
gi|380766619|gb|EIC00624.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
Length = 652
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 198/372 (53%), Gaps = 25/372 (6%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYET 129
GD +L++LP WH +ERA Y + + Y+ + D+ QP +M VP ++E
Sbjct: 237 GDIWLTVLPIWHSFERAFCYMVVALEGGFAYSKPIASVMLQDMNLIQPQWMNVVPRLFEA 296
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALIDWL 188
+ G+ +++ S ++ I + Y K G C R + ++D L
Sbjct: 297 VAQGLFREVKKQSGMQQFFFHNAIIVGKMYYKMKERVLGLRCRYR------WYPRVLDVL 350
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
W + +LWPLH++ E +YKK+++ G + +A +SGGG+L + FY AIG + G
Sbjct: 351 WGIVPFVLLWPLHMIGEVTLYKKLRARFGGNFRAVISGGGALQPGTEAFYHAIGFNLLEG 410
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV-----DAETNEVLPAGSKGIVKVRG 302
YG+TE +PVI+ R +VG ++KIV E+ E L G +GI+ VRG
Sbjct: 411 YGMTECAPVISVRNSKKPRSNNVGWVFPSFDVKIVAEKDGKVESGEPLKPGRRGIIMVRG 470
Query: 303 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
QVM+GY+K P T+ +D +GWLNTGD+G I+ L + GR KDTIVL
Sbjct: 471 RQVMKGYYKRPDLTEGVVDSEGWLNTGDLGMISYDEE----------LKIVGRTKDTIVL 520
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 422
GEN+EP +E+A S I + VV+GQD+R GA+IVPD+ VL A+ +I++ +
Sbjct: 521 LGGENIEPQVIEKAVNSSPYIERTVVVGQDKRYLGALIVPDQHSVLSYAEENNILYDNYE 580
Query: 423 ELSKEKTISLLY 434
L + I L+
Sbjct: 581 ALLETNEIQNLF 592
>gi|291288156|ref|YP_003504972.1| AMP-dependent synthetase and ligase [Denitrovibrio acetiphilus DSM
12809]
gi|290885316|gb|ADD69016.1| AMP-dependent synthetase and ligase [Denitrovibrio acetiphilus DSM
12809]
Length = 627
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 197/358 (55%), Gaps = 19/358 (5%)
Query: 55 MTNFQIRSLYDIVPA----ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKD 110
+TN I DI+P ++ D +LS+LP WH++E + G L+Y+ V+
Sbjct: 198 LTNRNIMHNLDIIPDLIALKDDDIWLSILPAWHIFEHTVELVAMANGCRLVYSGVKTFSA 257
Query: 111 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 170
DL+ Y+P + +VP V+E LYS + + + + L R S +Y R +G
Sbjct: 258 DLEHYKPTIVATVPRVWEALYSKVIATLDKQGGRKLSLFLMLCRASASYNRQLRRLKGH- 316
Query: 171 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 229
L +KQ + + I A + A L PL ++A K +K +Q G + VSGGGSL
Sbjct: 317 LPEFRKQ-NIFIKFIKNTGAALKLAALTPLKIIAMK-KFKAVQDKFGGRLRLAVSGGGSL 374
Query: 230 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 289
P +++ + +AIG+++ YG+TE +P IA R C+V G++G + TEI+IV+ E ++
Sbjct: 375 PAYLESWLDAIGLRIVNAYGMTECAPAIAGRALNCDVFGTLGPAVPGTEIRIVN-EDGDI 433
Query: 290 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 349
LPAG +G ++++G QV GY++ P + A +DG+ TGD+G + G
Sbjct: 434 LPAGEEGEIQIQGPQVFPGYYELPEENEHAFTDDGFFRTGDLGMLT----------LTGE 483
Query: 350 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
L + GR KD IVL+ GEN++P +E A ++ V++GQDQ+ A+I+PD E++
Sbjct: 484 LKITGRMKDIIVLANGENIDPTRIESAITMLPFVKDAVLVGQDQKSLAALIIPDFEKM 541
>gi|408793900|ref|ZP_11205505.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461135|gb|EKJ84865.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 671
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 197/352 (55%), Gaps = 14/352 (3%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D +S+LPPWH +ERA Y GI+ + + + +LKDDL+ ++P SVP ++E+
Sbjct: 259 NSNDNAVSLLPPWHAFERAIEYAGIFLGIDFLVSNMSSLKDDLRDFRPTIFPSVPRIWES 318
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+GI ++ + + +R + + + GF K+P+++V+L+ +
Sbjct: 319 VYNGIIAKVAKEGGFKEKLFHFFLRFGSTWAHYYAMCFGFEF--EIKKPNFIVSLVKRTY 376
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
A +I L PL L++ + ++ I A+G + +S G +LP +D F AIG+KV GY
Sbjct: 377 AFLILVFLSPLKLISIQ-IFSAIHKALGGRIRICISAGSALPSVVDGFLSAIGLKVLEGY 435
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE+S V++ R T G+VG PI +I++ D + G+KG + ++ Q+++G
Sbjct: 436 GMTETSAVVSIRSNTKPTKGTVGIPIAGYQIRLKDDTGKILTDVGAKGTLWIKSKQILKG 495
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P + D DG+ +TGD+ I+ + LV GR+KDTI L GENV
Sbjct: 496 YYKRPELNQVVFDTDGFFDTGDLMMISHRNE----------LVFAGRSKDTIALIGGENV 545
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 420
EP+ +E+ L SS I Q++V+G D++ GA+IVP+ E V +S AD
Sbjct: 546 EPIPIEDKLLTSSFIDQVMVVGHDKKTLGALIVPNFEAVETKIPGISKEKAD 597
>gi|386826469|ref|ZP_10113576.1| AMP-forming long-chain acyl-CoA synthetase [Beggiatoa alba B18LD]
gi|386427353|gb|EIJ41181.1| AMP-forming long-chain acyl-CoA synthetase [Beggiatoa alba B18LD]
Length = 640
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 221/422 (52%), Gaps = 40/422 (9%)
Query: 59 QIRSLYD----IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQR 114
QI S+ D +VP D+FLS+LP WH++ER G YT VR L +DL+
Sbjct: 209 QIASVQDLPIQVVPE---DRFLSILPVWHIFERVIEMVAVYYGAPTYYTNVRQLAEDLKT 265
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
+P M S P ++E++Y I + +S R+ + + + + +G L
Sbjct: 266 VRPTLMASAPRLWESIYQRILATLKNASPIRKTLFNLAYACARQFHLAQDFLKGNQLDIT 325
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHI 233
+ + L R+ AI + + L + +V K+++ G + VSGGG+LP HI
Sbjct: 326 GRSAAESAGLTVLNLGRL--AIFFLPYKLLDTIVLSKLRAVTGGCFRGTVSGGGALPRHI 383
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--- 290
D F+ IG+ + GYGLTE V++ R V+G+VG T I+IVD TNEVL
Sbjct: 384 DEFFNFIGIPILEGYGLTEGM-VLSVRTFGQRVIGTVGVLFPITTIRIVDINTNEVLYPN 442
Query: 291 PA------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 344
PA G +G + V+G QVM Y+KN AT +A EDGWLNTGD+G ++S
Sbjct: 443 PAKKGEGRGLQGEIHVKGEQVMHSYYKNDEATAKAFKEDGWLNTGDLGIFTFNNS----- 497
Query: 345 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 404
L + GR+KDTIVL GENVEP+ +E +S LI Q +++GQD++ G ++VP
Sbjct: 498 -----LKITGRSKDTIVLLGGENVEPVPIETRLCQSDLIEQCMLVGQDKKTIGVLLVP-- 550
Query: 405 EEVLMAAKRLSIVHADASELSKEKTI--SLLYGELRKWTSKCSFQ----IGPIHVVDEPF 458
L K+L I + +ELS++ + L+ ++K F+ I ++V+D+PF
Sbjct: 551 --ALEGFKKLGITAENVAELSQQPAVREHLVQAVKTLISTKQGFKPFEVIQDVYVLDKPF 608
Query: 459 TV 460
V
Sbjct: 609 EV 610
>gi|392405230|ref|YP_006441842.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390613184|gb|AFM14336.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 634
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 197/348 (56%), Gaps = 23/348 (6%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ LS+LP WH+YER Y + G Y+ ++L +D R +P M S P ++E +Y
Sbjct: 226 DRILSILPVWHIYERFMLYSVIFSGAHYYYSNKKDLMEDFIRAKPTIMASAPRLWEQIYQ 285
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK----QPSYLVALIDWL 188
++++I + A R + +Y +R++ + Q + ++L L +
Sbjct: 286 KLRERIDKTEAFNREL------FDLSYGIKQRLHRAQNVVAGQSAETGEKNFLSNLFEKA 339
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVG 247
+ A L + + + ++++ +G G +SGGG+LP+HID F+ AIG+ V G
Sbjct: 340 VSVFSLAGLKGPDVYMDSIFLVRVRAMLGGELRGTISGGGALPLHIDEFFNAIGIPVYEG 399
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE+SP+I+ R+P ++G+VG + T ++I E ++P G G++ V+G VMQ
Sbjct: 400 YGMTETSPLISMRQPGKVIMGTVGFVPDRTTVEI-RGEDGRIMPPGEPGVIFVKGPGVMQ 458
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+KN AT + L ++GW+NTGDIG RS G L + GRAKDTIVL +GEN
Sbjct: 459 GYYKNGDATLKVL-QNGWMNTGDIGVFT------RS----GALSIRGRAKDTIVLRSGEN 507
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
+EP+ +E + LI Q VV+GQDQ+ G +I PD + +L A ++S
Sbjct: 508 LEPVPMETLLAQHPLIEQAVVVGQDQKNLGVLIWPDYDRLLDAGYQVS 555
>gi|42527248|ref|NP_972346.1| AMP-binding protein [Treponema denticola ATCC 35405]
gi|41817672|gb|AAS12257.1| AMP-binding enzyme family protein [Treponema denticola ATCC 35405]
Length = 641
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 200/381 (52%), Gaps = 23/381 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 116
Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L D+ +
Sbjct: 219 QLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLADMVKIN 278
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC--LTRN 174
P SVP ++E +Y GI K + + I + KR G C R
Sbjct: 279 PTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRK 338
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG+LP ++
Sbjct: 339 TKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRAGVSGGGALPPNV 391
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D E LP
Sbjct: 392 DEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGKE-LPHN 450
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG++ VRG V +GY+K+P T + +D+DGW +TGD+ + G L+L+
Sbjct: 451 RKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVDGELILK 500
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE + A
Sbjct: 501 GRKKNTIVLRGGENIEPVPIEVKLQESPLISLAVVLGQDQRSLGALIVVHKENLQSWAAN 560
Query: 414 LSIVHADASELSKEKTISLLY 434
+ + +EL + + +Y
Sbjct: 561 NGLRNVPVTELIHDSNVQKMY 581
>gi|422342229|ref|ZP_16423169.1| AMP-binding enzyme family protein [Treponema denticola F0402]
gi|325474297|gb|EGC77485.1| AMP-binding enzyme family protein [Treponema denticola F0402]
Length = 641
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 200/381 (52%), Gaps = 23/381 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 116
Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L D+ +
Sbjct: 219 QLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLADMVKIN 278
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC--LTRN 174
P SVP ++E +Y GI K + + I + KR G C R
Sbjct: 279 PTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRK 338
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG+LP ++
Sbjct: 339 TKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRAGVSGGGALPPNV 391
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D E LP
Sbjct: 392 DEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGKE-LPHN 450
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG++ VRG V +GY+K+P T + +D+DGW +TGD+ + G L+L+
Sbjct: 451 RKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVDGELILK 500
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE + A
Sbjct: 501 GRKKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVHKENLQSWAAN 560
Query: 414 LSIVHADASELSKEKTISLLY 434
+ + +EL + + +Y
Sbjct: 561 NGLRNVPVTELIHDSNVQKMY 581
>gi|449111695|ref|ZP_21748264.1| hypothetical protein HMPREF9735_01313 [Treponema denticola ATCC
33521]
gi|449113498|ref|ZP_21750003.1| hypothetical protein HMPREF9721_00521 [Treponema denticola ATCC
35404]
gi|448956966|gb|EMB37719.1| hypothetical protein HMPREF9735_01313 [Treponema denticola ATCC
33521]
gi|448959708|gb|EMB40427.1| hypothetical protein HMPREF9721_00521 [Treponema denticola ATCC
35404]
Length = 616
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 200/381 (52%), Gaps = 23/381 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 116
Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L D+ +
Sbjct: 194 QLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLADMVKIN 253
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC--LTRN 174
P SVP ++E +Y GI K + + I + KR G C R
Sbjct: 254 PTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRK 313
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG+LP ++
Sbjct: 314 TKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRAGVSGGGALPPNV 366
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D E LP
Sbjct: 367 DEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGKE-LPHN 425
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG++ VRG V +GY+K+P T + +D+DGW +TGD+ + G L+L+
Sbjct: 426 RKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVDGELILK 475
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE + A
Sbjct: 476 GRKKNTIVLRGGENIEPVPIEVKLQESPLISLAVVLGQDQRSLGALIVVHKENLQSWAAN 535
Query: 414 LSIVHADASELSKEKTISLLY 434
+ + +EL + + +Y
Sbjct: 536 NGLRNVPVTELIHDSNVQKMY 556
>gi|449102428|ref|ZP_21739177.1| hypothetical protein HMPREF9730_00074 [Treponema denticola AL-2]
gi|448966400|gb|EMB47056.1| hypothetical protein HMPREF9730_00074 [Treponema denticola AL-2]
Length = 616
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 200/381 (52%), Gaps = 23/381 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 116
Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L D+ +
Sbjct: 194 QLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLADMVKIN 253
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC--LTRN 174
P SVP ++E +Y GI K + + I + KR G C R
Sbjct: 254 PTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRK 313
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG+LP ++
Sbjct: 314 TKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRAGVSGGGALPPNV 366
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D E LP
Sbjct: 367 DEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGKE-LPHN 425
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG++ VRG V +GY+K+P T + +D+DGW +TGD+ + G L+L+
Sbjct: 426 RKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVDGELILK 475
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE + A
Sbjct: 476 GRKKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVHKENLQSWAAN 535
Query: 414 LSIVHADASELSKEKTISLLY 434
+ + +EL + + +Y
Sbjct: 536 NGLRNVPVTELIHDSNVQKMY 556
>gi|449107587|ref|ZP_21744240.1| hypothetical protein HMPREF9729_02505 [Treponema denticola ASLM]
gi|451969280|ref|ZP_21922509.1| hypothetical protein HMPREF9728_01703 [Treponema denticola US-Trep]
gi|448961541|gb|EMB42241.1| hypothetical protein HMPREF9729_02505 [Treponema denticola ASLM]
gi|451701884|gb|EMD56329.1| hypothetical protein HMPREF9728_01703 [Treponema denticola US-Trep]
Length = 616
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 200/381 (52%), Gaps = 23/381 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 116
Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L D+ +
Sbjct: 194 QLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLADMVKIN 253
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC--LTRN 174
P SVP ++E +Y GI K + + I + KR G C R
Sbjct: 254 PTLFPSVPRIWEAVYGGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRK 313
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG+LP ++
Sbjct: 314 TKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRAGVSGGGALPPNV 366
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D E LP
Sbjct: 367 DEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGKE-LPHN 425
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG++ VRG V +GY+K+P T + +D+DGW +TGD+ + G L+L+
Sbjct: 426 RKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVDGELILK 475
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE + A
Sbjct: 476 GRKKNTIVLRGGENIEPVPIEVKLQESPLISLAVVLGQDQRSLGALIVVHKENLQSWAAN 535
Query: 414 LSIVHADASELSKEKTISLLY 434
+ + +EL + + +Y
Sbjct: 536 NGLRNVPVTELIHDSNVQKMY 556
>gi|449128811|ref|ZP_21765057.1| hypothetical protein HMPREF9733_02460 [Treponema denticola SP33]
gi|448941219|gb|EMB22123.1| hypothetical protein HMPREF9733_02460 [Treponema denticola SP33]
Length = 641
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 201/379 (53%), Gaps = 19/379 (5%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 116
Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L D+ +
Sbjct: 219 QLLELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSILLADMLKIN 278
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P SVP ++E +Y GI K + + + + KR G C Q+
Sbjct: 279 PTLFPSVPRIWEAVYDGIFKVMKKRGRPLYYLFLFFVDVGIKTMRLKRRVTGQC-PHFQR 337
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ L ++ L ++C + P++ + + L+Y+ I+ G KAGVSGGG+LP ++D
Sbjct: 338 RTKVLYPILAVL--PLLC--IAPMYYIGDLLIYRTIRKKFGKCFKAGVSGGGALPPNVDE 393
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ A+ + V GYG+TE++PVI+ R V G++G P+ E KI+D NE LP K
Sbjct: 394 FFWAVRINVMEGYGITETAPVISVRPMPRPVFGTLGKPLACFESKIIDKNGNE-LPHNRK 452
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G++ V+G V +GY+K P T + +D+DGW +TGD+ + G L+L+GR
Sbjct: 453 GLLLVKGDAVTKGYYKEPERTAEVIDKDGWFDTGDLAI----------KTIDGELILKGR 502
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE + A
Sbjct: 503 RKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVHKENLQAWAANNG 562
Query: 416 IVHADASELSKEKTISLLY 434
+ + SEL + + +Y
Sbjct: 563 LRNVPVSELVHDSNVQKMY 581
>gi|449116076|ref|ZP_21752529.1| hypothetical protein HMPREF9726_00514 [Treponema denticola H-22]
gi|448954596|gb|EMB35373.1| hypothetical protein HMPREF9726_00514 [Treponema denticola H-22]
Length = 616
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 200/381 (52%), Gaps = 23/381 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 116
Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L D+ +
Sbjct: 194 QLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLADMVKIN 253
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC--LTRN 174
P SVP ++E +Y GI K + + I + KR G C R
Sbjct: 254 PTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRK 313
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG+LP ++
Sbjct: 314 TKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRAGVSGGGALPPNV 366
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D E LP
Sbjct: 367 DEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGKE-LPHN 425
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG++ VRG V +GY+K+P T + +D+DGW +TGD+ + G L+L+
Sbjct: 426 RKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVDGELILK 475
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE + A
Sbjct: 476 GRKKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVHKENLQSWAAN 535
Query: 414 LSIVHADASELSKEKTISLLY 434
+ + +EL + + +Y
Sbjct: 536 NGLRNVPVTELIHDSNVQKMY 556
>gi|282898837|ref|ZP_06306824.1| hypothetical protein CRC_00129 [Cylindrospermopsis raciborskii
CS-505]
gi|281196364|gb|EFA71274.1| hypothetical protein CRC_00129 [Cylindrospermopsis raciborskii
CS-505]
Length = 289
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 158/263 (60%), Gaps = 29/263 (11%)
Query: 217 GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 276
G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV ARR N+ GS G PI
Sbjct: 7 GKIKQVISGGGALPRHIDNFFEMIGVEILQGYGLTETSPVTNARRIWRNLRGSSGQPIAG 66
Query: 277 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 336
T++KIV ET + LP G G+V ++G QVM GY++N ATKQ +D DGW N+GD+GW+ P
Sbjct: 67 TQVKIVHPETKDPLPPGKIGLVLLKGPQVMGGYYQNLEATKQVIDNDGWFNSGDLGWVTP 126
Query: 337 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 396
+ LVL GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQR
Sbjct: 127 END----------LVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSL 176
Query: 397 GAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTI------------SLLYGELRKWTS 442
GA+IVP D E + +++ D S ++++ I L EL +
Sbjct: 177 GALIVPNLDALEKWAEVENINLPTQDDSTENEDQKIGQKIDLENKIIQDLYRKELNREVQ 236
Query: 443 -----KCSFQIGPIHVVDEPFTV 460
+ +IGP ++ EPF++
Sbjct: 237 NRPGYRVDDRIGPFKLIPEPFSM 259
>gi|328949040|ref|YP_004366377.1| long-chain-fatty-acid--CoA ligase., o-succinylbenzoate--CoA ligase
[Treponema succinifaciens DSM 2489]
gi|328449364|gb|AEB15080.1| Long-chain-fatty-acid--CoA ligase., o-succinylbenzoate--CoA ligase
[Treponema succinifaciens DSM 2489]
Length = 645
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 219/407 (53%), Gaps = 38/407 (9%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYET 129
G++ L +LP WH ++RA Y I ++G L Y+ L DLQ+ P+ + +VP V+
Sbjct: 230 GERALLVLPVWHAFQRAVEYVIIAQGGTLCYSKPIGSVLLQDLQKLDPYLLPAVPRVWSA 289
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTA-FKRIYEGFCLTRNQKQPSYLV---ALI 185
+Y GI +++ + +A AL R A + +I + P YL ++
Sbjct: 290 VYEGIWRKMRKTGG----IAFALFRFFVAEALLWSKIDRKLRRKNTRFSPDYLGFWWPVL 345
Query: 186 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 244
W W +L+P+ LL LV++KI++ +G + ++G++GGG+ P ++D F+ AIGV +
Sbjct: 346 VWPWL-----LLYPIKLLGNLLVFRKIRAMVGKNFRSGIAGGGAFPKNVDEFFWAIGVNI 400
Query: 245 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 304
Q GYGLTE+SP+I+ R + G+VG P+ E+++VD + +L KG ++++G
Sbjct: 401 QEGYGLTETSPIISVRPIADPIFGNVGTPLRGMEVRVVD-DDGIILGRCKKGTLQIKGDC 459
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
VMQGY+K P T + + DGW +TGDI ++ ++ + L GR KDTIVL
Sbjct: 460 VMQGYYKRPDLTDKVMTVDGWFDTGDIAILSVNNE----------IQLRGRKKDTIVLQG 509
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQ-----DQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
GEN+EPL +E S I VV G DQ+ A+I+PD++ + A I
Sbjct: 510 GENIEPLPIEAKINESRFISTSVVFGTNEKGIDQKYLVALILPDQDAIETYATENGINFN 569
Query: 420 DASELSKEKTIS-LLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 460
EL++ + I LL GE+ ++K F+ I I V+ +PF V
Sbjct: 570 SYDELAETEAIQKLLEGEVFESISAKNGFKSFERINKIAVITKPFEV 616
>gi|187918016|ref|YP_001883579.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
gi|119860864|gb|AAX16659.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
Length = 631
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 230/425 (54%), Gaps = 47/425 (11%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++++ RN+ DD++
Sbjct: 204 YQVSSFSRMISTSEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSSIVPRNMLDDIKNI 263
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI--------SFAYTAFKRIY- 166
PHY+ +VP L+ I++ IF A + +AR L ++ Y +Y
Sbjct: 264 NPHYIAAVP----RLWIAIKQNIFKEVAKKPFLARLLFKVFVKAACLNDICYRIISGLYP 319
Query: 167 -EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 224
GF L K+ ++ L+ IL+PL +L + +V+KKI+ +G + G++
Sbjct: 320 DNGFDLLMPMKKILGILGLV----------ILFPLKILGDLIVFKKIKKVLGDNFVVGIT 369
Query: 225 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 284
GGGS+ + + F+ +IG+++ YGLTE+SP +A+ +LG+ G + T +I D
Sbjct: 370 GGGSMSLFVVRFFNSIGIELANAYGLTEASPGVASDEHGKIMLGTCGKILPGTVAEIRDE 429
Query: 285 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 344
N++ G KG++ ++G QVM GY+++ AT+Q + +DG+LNTGDI ++ +
Sbjct: 430 NGNKLKKPG-KGVLFIKGPQVMLGYYQDEDATRQVIGDDGFLNTGDIVKLSKDN------ 482
Query: 345 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 404
V+ + GR KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P+
Sbjct: 483 ----VVRIIGREKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILPNF 538
Query: 405 EEVLM----AAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVD 455
EE+ +++ H ++ + + E+RK +K + QI +++
Sbjct: 539 EEINKYLESMGQKIFDAHNRQQIIANNIVLKAINDEIRKLINKANGFKPFEQILRFVLLE 598
Query: 456 EPFTV 460
+PF V
Sbjct: 599 KPFEV 603
>gi|119953377|ref|YP_945586.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
gi|119862148|gb|AAX17916.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
Length = 643
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 208/391 (53%), Gaps = 25/391 (6%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 114
FQ+ + D +P + G +S+LP WH +ER C Y + G+ + Y+ L D
Sbjct: 210 FQVDRIGDYLPTIKPGKIMISILPLWHSFERTCEYIVALNGMAIAYSKPIGPVLLKDFAA 269
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
PH +ISVP ++E + GI K++ + S +R + ++I Y K + G L
Sbjct: 270 LNPHAIISVPRIWEGIRIGIMKRV-SESFFKRFLFNFFLKIGILYIKLKEKFLG--LVPV 326
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K+ ++LV++ + + P L LV++KI+ A+G + GVSGGG+L ++
Sbjct: 327 YKRSNFLVSIFIKVACLTGLIFILPFKFLGHVLVFRKIKKALGKRFEFGVSGGGALVNYV 386
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F++A+G+ V GYGLTE+ PV++ RR V +VG E ++V + N + P G
Sbjct: 387 DYFFKAVGIMVLEGYGLTETGPVLSVRRFKSPVANTVGPLFPDIEYRVVGNDGNFLSP-G 445
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VR QVM GYFK+ + T++ L DGW TGD+ ++ + +
Sbjct: 446 EKGELWVRSPQVMSGYFKDDTTTREVLTRDGWFKTGDLVCATINNE----------ISIV 495
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR+KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIVP+ E + A
Sbjct: 496 GRSKDTIVLRGGENIEPESIERALSKSLFIENVVVVGQDQKFLGAIIVPNFEVLEKWAGS 555
Query: 414 LSIVHADASELSKEKTISLLYGELRKWTSKC 444
I+ +L ++++ LY SKC
Sbjct: 556 NEIIFDSHDDLLSNESVNKLY-------SKC 579
>gi|449109188|ref|ZP_21745826.1| hypothetical protein HMPREF9722_01522 [Treponema denticola ATCC
33520]
gi|449119875|ref|ZP_21756266.1| hypothetical protein HMPREF9725_01731 [Treponema denticola H1-T]
gi|449122271|ref|ZP_21758615.1| hypothetical protein HMPREF9727_01375 [Treponema denticola MYR-T]
gi|448948751|gb|EMB29584.1| hypothetical protein HMPREF9727_01375 [Treponema denticola MYR-T]
gi|448948874|gb|EMB29704.1| hypothetical protein HMPREF9725_01731 [Treponema denticola H1-T]
gi|448959834|gb|EMB40552.1| hypothetical protein HMPREF9722_01522 [Treponema denticola ATCC
33520]
Length = 616
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 200/381 (52%), Gaps = 23/381 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 116
Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L D+ +
Sbjct: 194 QLLELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLADMVKIN 253
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC--LTRN 174
P SVP ++E +Y GI K + + I + KR G C R
Sbjct: 254 PTLFPSVPRIWEAVYDGIFKVMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRK 313
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG+LP ++
Sbjct: 314 TKVIYPILAVLPLL-----C--IAPLYYIGDILIYRAIRKKFGKCFRAGVSGGGALPPNV 366
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D E LP
Sbjct: 367 DEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGKE-LPHN 425
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG++ VRG V +GY+K+P T + +D+DGW +TGD+ + G L+L+
Sbjct: 426 RKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVDGELILK 475
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE + A
Sbjct: 476 GRKKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVHKENLQSWAAN 535
Query: 414 LSIVHADASELSKEKTISLLY 434
+ + +EL + + +Y
Sbjct: 536 NGLRNVPVTELIHDSNVQKMY 556
>gi|24217154|ref|NP_714637.1| long-chain-fatty-acid--CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|45655657|ref|YP_003466.1| long-chain-fatty-acid--CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386076113|ref|YP_005990302.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|417759668|ref|ZP_12407702.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417766351|ref|ZP_12414303.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417776506|ref|ZP_12424343.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|417786919|ref|ZP_12434604.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|418666198|ref|ZP_13227629.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418671279|ref|ZP_13232631.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418690921|ref|ZP_13252028.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418725531|ref|ZP_13284149.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421086594|ref|ZP_15547442.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421104017|ref|ZP_15564613.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421119509|ref|ZP_15579829.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|24202192|gb|AAN51652.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|45602628|gb|AAS72103.1| long-chain-fatty-acid--CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353459775|gb|AER04319.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|400351178|gb|EJP03418.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400359957|gb|EJP15938.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409944416|gb|EKN89999.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409949771|gb|EKO04304.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|409961168|gb|EKO24915.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410347660|gb|EKO98533.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410366498|gb|EKP21890.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430623|gb|EKP74986.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|410573715|gb|EKQ36760.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410581540|gb|EKQ49349.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410758145|gb|EKR19744.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 645
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 186/335 (55%), Gaps = 16/335 (4%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ ++ LPPWH+ ER G +T++ +L DL +P ++SVP V+E+LY+
Sbjct: 235 DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYN 294
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I ++ SS ++ + A I+ Y +K + L + + S +L L +
Sbjct: 295 KIHDKVRNSSPVQQALFGAFKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFW 352
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
I +LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+T
Sbjct: 353 IVILLWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMT 411
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E S + R +G++G I +IK++D + NE+ G KGI +G VM+GY+K
Sbjct: 412 ELSGISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYK 471
Query: 312 NPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP
Sbjct: 472 EPEKTKEILSSDGWLNSGDLLTWT-----------TSGELKYSGRAKDTIVLLGGENLEP 520
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+E A +RS I+Q +VIG DQ+ GA+IVPD+E
Sbjct: 521 EPIEFALVRSRFIQQAMVIGHDQKTLGALIVPDRE 555
>gi|418699116|ref|ZP_13260083.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|421128285|ref|ZP_15588500.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135813|ref|ZP_15595933.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410020118|gb|EKO86923.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410434010|gb|EKP83151.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410761976|gb|EKR28147.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|455793442|gb|EMF45140.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 645
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 186/335 (55%), Gaps = 16/335 (4%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ ++ LPPWH+ ER G +T++ +L DL +P ++SVP V+E+LY+
Sbjct: 235 DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYN 294
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I ++ SS ++ + A I+ Y +K + L + + S +L L +
Sbjct: 295 KIHDKVRNSSPVQQALFGAFKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFW 352
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
I +LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+T
Sbjct: 353 IVILLWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMT 411
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E S + R +G++G I +IK++D + NE+ G KGI +G VM+GY+K
Sbjct: 412 ELSGISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYK 471
Query: 312 NPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP
Sbjct: 472 EPEKTKEILSSDGWLNSGDLLTWT-----------TSGELKYSGRAKDTIVLLGGENLEP 520
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+E A +RS I+Q +VIG DQ+ GA+IVPD+E
Sbjct: 521 EPIEFALVRSRFIQQAMVIGHDQKTLGALIVPDRE 555
>gi|418733739|ref|ZP_13290850.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|410772920|gb|EKR52952.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
Length = 645
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 186/335 (55%), Gaps = 16/335 (4%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ ++ LPPWH+ ER G +T++ +L DL +P ++SVP V+E+LY+
Sbjct: 235 DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYN 294
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I ++ SS ++ + A I+ Y +K + L + + S +L L +
Sbjct: 295 KIHDKVRNSSPVQQALFGAFKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFW 352
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
I +LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+T
Sbjct: 353 IVILLWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMT 411
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E S + R +G++G I +IK++D + NE+ G KGI +G VM+GY+K
Sbjct: 412 ELSGISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYK 471
Query: 312 NPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP
Sbjct: 472 EPEKTKEILSSDGWLNSGDLLTWT-----------TSGELKYSGRAKDTIVLLGGENLEP 520
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+E A +RS I+Q +VIG DQ+ GA+IVPD+E
Sbjct: 521 EPIEFALVRSRFIQQAMVIGHDQKTLGALIVPDRE 555
>gi|417772634|ref|ZP_12420522.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418681870|ref|ZP_13243092.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418704770|ref|ZP_13265637.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418712874|ref|ZP_13273603.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|421115985|ref|ZP_15576378.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|400326387|gb|EJO78654.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409945311|gb|EKN95327.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410012481|gb|EKO70579.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410765383|gb|EKR36083.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410790643|gb|EKR84335.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|455669836|gb|EMF34894.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 645
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 186/335 (55%), Gaps = 16/335 (4%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ ++ LPPWH+ ER G +T++ +L DL +P ++SVP V+E+LY+
Sbjct: 235 DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYN 294
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I ++ SS ++ + A I+ Y +K + L + + S +L L +
Sbjct: 295 KIHDKVRNSSPVQQALFGAFKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFW 352
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
I +LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+T
Sbjct: 353 IVILLWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMT 411
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E S + R +G++G I +IK++D + NE+ G KGI +G VM+GY+K
Sbjct: 412 ELSGISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYK 471
Query: 312 NPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP
Sbjct: 472 EPEKTKEILSSDGWLNSGDLLTWT-----------TSGELKYSGRAKDTIVLLGGENLEP 520
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+E A +RS I+Q +VIG DQ+ GA+IVPD+E
Sbjct: 521 EPIEFALVRSRFIQQAMVIGHDQKTLGALIVPDRE 555
>gi|418710506|ref|ZP_13271276.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410769095|gb|EKR44338.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|456966688|gb|EMG08222.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 645
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 186/335 (55%), Gaps = 16/335 (4%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ ++ LPPWH+ ER G +T++ +L DL +P ++SVP V+E+LY+
Sbjct: 235 DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYN 294
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I ++ SS ++ + A I+ Y +K + L + + S +L L +
Sbjct: 295 KIHDKVRNSSPVQQALFGAFKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFW 352
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
I +LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+T
Sbjct: 353 IVILLWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMT 411
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E S + R +G++G I +IK++D + NE+ G KGI +G VM+GY+K
Sbjct: 412 ELSGISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYK 471
Query: 312 NPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP
Sbjct: 472 EPEKTKEILSSDGWLNSGDLLTWT-----------TSGELKYSGRAKDTIVLLGGENLEP 520
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+E A +RS I+Q +VIG DQ+ GA+IVPD+E
Sbjct: 521 EPIEFALVRSRFIQQAMVIGHDQKTLGALIVPDRE 555
>gi|449131475|ref|ZP_21767689.1| hypothetical protein HMPREF9724_02354 [Treponema denticola SP37]
gi|448939175|gb|EMB20093.1| hypothetical protein HMPREF9724_02354 [Treponema denticola SP37]
Length = 616
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 200/381 (52%), Gaps = 23/381 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 116
Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L D+ +
Sbjct: 194 QLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLADMVKIN 253
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC--LTRN 174
P SVP ++E +Y GI K + + I + KR G C R
Sbjct: 254 PTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRK 313
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG+LP ++
Sbjct: 314 TKVIYPILAVLPLL-----C--IAPLYYIGDILIYRAIRKKFGKCFRAGVSGGGALPPNV 366
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI++ E LP
Sbjct: 367 DEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIINKNGKE-LPHN 425
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG++ VRG V +GY+K+P T + +D+DGW +TGD+ + G L+L+
Sbjct: 426 RKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVDGELILK 475
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE + A
Sbjct: 476 GRKKNTIVLRGGENIEPVPIEVKLQESPLISLAVVLGQDQRSLGALIVVHKENLQSWAAN 535
Query: 414 LSIVHADASELSKEKTISLLY 434
+ + +EL + + +Y
Sbjct: 536 NGLRNVPVTELIHDSNVQKMY 556
>gi|392403578|ref|YP_006440190.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390611532|gb|AFM12684.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 634
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 208/401 (51%), Gaps = 34/401 (8%)
Query: 50 MPIPKMTNFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLK 109
M K ++I + D +P +G + LPPWHV ER ++G+ + +T+V L
Sbjct: 202 MHTQKSLAWEIWHVADGLPLISGGVTMGFLPPWHVAERLIESVALTKGVAIAFTSVATLA 261
Query: 110 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 169
DLQ +P +++SVP V+E+ Y+ + + +S VA+ + + ++A E
Sbjct: 262 KDLQEARPTFLLSVPRVWESFYNKVIDGVKKASP----VAQKIFHFA-RWSAMHFSLEKD 316
Query: 170 CLTRNQ---KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGG 226
L+ + ++PS L L A + +L+ +LLA+ ++ K + G + +SG
Sbjct: 317 ILSNTKYRLEKPSILFHLFRRPAALVNLVLLFIPNLLAQVILAKVRRGLGGRVQFALSGA 376
Query: 227 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 286
G+LP HID F+ +IG+ + YG+TE+ V R V+G+VG PI T +K++D
Sbjct: 377 GALPEHIDRFFYSIGIAIVETYGMTETGGVTCRRTYPATVIGTVGKPIKGTRVKLLDDHG 436
Query: 287 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 346
NEV +KG+ G +M+GY+K T + L +DGWLN+GDI
Sbjct: 437 NEVTKPNTKGVCWHTGPHIMKGYYKEDQKTSEVL-KDGWLNSGDI----------LVYTA 485
Query: 347 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 406
G L GRAKDTIVL GENVEP +E+ ++S I QIVV+GQD++ GA+IVP KE
Sbjct: 486 NGELKFAGRAKDTIVLFGGENVEPQPIEDTLIQSEYIHQIVVVGQDKKTLGALIVPAKEA 545
Query: 407 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQ 447
VL +A+ ++L L E+R W Q
Sbjct: 546 VLK--------YAEENKLQ-------LPAEMRDWPVNADIQ 571
>gi|282896868|ref|ZP_06304874.1| hypothetical protein CRD_01572 [Raphidiopsis brookii D9]
gi|281198277|gb|EFA73167.1| hypothetical protein CRD_01572 [Raphidiopsis brookii D9]
Length = 289
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 158/263 (60%), Gaps = 29/263 (11%)
Query: 217 GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 276
G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV ARR N+ GS G PI
Sbjct: 7 GKIKQVISGGGALPRHIDNFFEIIGVEILQGYGLTETSPVTNARRIWRNLRGSSGQPIAG 66
Query: 277 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 336
T++KIV ET + LPAG G+V ++G QVM GY++N ATKQ +D GW N+GD+GW+ P
Sbjct: 67 TQVKIVHPETKDPLPAGKIGLVLLKGPQVMGGYYQNLEATKQVIDNHGWFNSGDLGWVTP 126
Query: 337 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 396
+ LVL GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQR
Sbjct: 127 END----------LVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSL 176
Query: 397 GAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTI------------SLLYGELRKWTS 442
GA+IVP D E + +++ D S ++++ I L EL +
Sbjct: 177 GALIVPNLDALEKWAEVENINLPTQDDSTENEDQKIGQKIDLENKIIQDLYRKELNREVQ 236
Query: 443 -----KCSFQIGPIHVVDEPFTV 460
+ +IGP ++ EPF++
Sbjct: 237 NRPGYRADDRIGPFKLILEPFSM 259
>gi|421131450|ref|ZP_15591632.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|410357233|gb|EKP04500.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 645
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 185/335 (55%), Gaps = 16/335 (4%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ ++ LPPWH+ ER G +T++ L DL +P ++SVP V+E+LY+
Sbjct: 235 DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSISTLSQDLADIKPTLLLSVPRVWESLYN 294
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I ++ SS ++ + A I+ Y +K + L + + S +L L +
Sbjct: 295 KIHDKVRNSSPVQQALFGAFKEIAITY--YKHLSRLQDLEYSLMEQSTFASLWQKLISLW 352
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
I +LW + +++ L + KI+ +G + +SG G+LP +ID F+ AIG+ + GYG+T
Sbjct: 353 IVILLWIPNQISQ-LAFNKIKQGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMT 411
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E S + R +G++G I +IK++D + NE+ G KGI +G VM+GY+K
Sbjct: 412 ELSGISTRRIFGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYK 471
Query: 312 NPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP
Sbjct: 472 EPEKTKEILSSDGWLNSGDLLAWT-----------TSGELKYSGRAKDTIVLLGGENLEP 520
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+E A +RS I+Q +V+G DQ+ GA+IVPDKE
Sbjct: 521 EPIEFALVRSRFIQQAMVVGHDQKTLGALIVPDKE 555
>gi|418696753|ref|ZP_13257757.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|421105762|ref|ZP_15566340.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|409955363|gb|EKO14300.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|410009156|gb|EKO62814.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 645
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 185/335 (55%), Gaps = 16/335 (4%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ ++ LPPWH+ ER G +T+V L DL +P ++SVP V+E+LY+
Sbjct: 235 DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSVSTLSQDLADIKPTLLLSVPRVWESLYN 294
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I ++ SS ++ + A I+ Y +K + L + + S +L L +
Sbjct: 295 KIHDKVRNSSPVQQALFGAFKEIAITY--YKHLSRLQDLEYSLVEQSTFASLWQKLISLW 352
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
I +LW + +++ L + KI+ +G + +SG G+LP +ID F+ AIG+ + GYG+T
Sbjct: 353 IVILLWIPNQISQ-LAFNKIKQGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMT 411
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E S + R +G++G I +IK++D + NE+ G KGI +G VM+GY+K
Sbjct: 412 ELSGISTRRIFGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYK 471
Query: 312 NPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP
Sbjct: 472 EPEKTKEILSSDGWLNSGDLLAWT-----------TSGELKYSGRAKDTIVLLGGENLEP 520
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+E A +RS I+Q +V+G DQ+ GA+IVPDKE
Sbjct: 521 EPIEFALVRSRFIQQAMVVGHDQKTLGALIVPDKE 555
>gi|398338188|ref|ZP_10522891.1| long-chain-fatty-acid--CoA ligase [Leptospira kirschneri serovar
Bim str. 1051]
Length = 645
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 185/335 (55%), Gaps = 16/335 (4%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ ++ LPPWH+ ER G +T++ L DL +P ++SVP V+E+LY+
Sbjct: 235 DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSISTLSQDLADIKPTLLLSVPRVWESLYN 294
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I ++ SS ++ + A I+ Y +K + L + + S +L L +
Sbjct: 295 KIHDKVRNSSPVQQALFGAFKEIAITY--YKHLSRLQDLEYSLVEQSTFASLWQKLISLW 352
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
I +LW + +++ L + KI+ +G + +SG G+LP +ID F+ AIG+ + GYG+T
Sbjct: 353 IVILLWIPNQISQ-LAFNKIKQGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMT 411
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E S + R +G++G I +IK++D + NE+ G KGI +G VM+GY+K
Sbjct: 412 ELSGISTRRIFGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYK 471
Query: 312 NPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP
Sbjct: 472 EPEKTKEILSSDGWLNSGDLLAWT-----------TSGELKYSGRAKDTIVLLGGENLEP 520
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+E A +RS I+Q +V+G DQ+ GA+IVPDKE
Sbjct: 521 EPIEFALVRSRFIQQAMVVGHDQKTLGALIVPDKE 555
>gi|418679673|ref|ZP_13240934.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418684543|ref|ZP_13245727.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418740250|ref|ZP_13296628.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421088000|ref|ZP_15548829.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|400320115|gb|EJO67988.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410003256|gb|EKO53701.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410740743|gb|EKQ85457.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752254|gb|EKR09229.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 645
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 185/335 (55%), Gaps = 16/335 (4%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ ++ LPPWH+ ER G +T++ L DL +P ++SVP V+E+LY+
Sbjct: 235 DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSISTLSQDLADIKPTLLLSVPRVWESLYN 294
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I ++ SS ++ + A I+ Y +K + L + + S +L L +
Sbjct: 295 KIHDKVRNSSPVQQALFGAFKEIAITY--YKHLSRLQDLEYSLVEQSTFASLWQKLISLW 352
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
I +LW + +++ L + KI+ +G + +SG G+LP +ID F+ AIG+ + GYG+T
Sbjct: 353 IVILLWIPNQISQ-LAFNKIKQGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMT 411
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E S + R +G++G I +IK++D + NE+ G KGI +G VM+GY+K
Sbjct: 412 ELSGISTRRIFGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYK 471
Query: 312 NPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP
Sbjct: 472 EPEKTKEILSSDGWLNSGDLLAWT-----------TSGELKYSGRAKDTIVLLGGENLEP 520
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+E A +RS I+Q +V+G DQ+ GA+IVPDKE
Sbjct: 521 EPIEFALVRSRFIQQAMVVGHDQKTLGALIVPDKE 555
>gi|374586246|ref|ZP_09659338.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875107|gb|EHQ07101.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 643
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 200/336 (59%), Gaps = 17/336 (5%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYET 129
+ GD+ LS+LPPWH +ER Y + G+ M + + L+DDL+ ++P SVP ++E+
Sbjct: 225 QKGDRALSLLPPWHAFERGVEYAVVYLGLAFMVSDISCLRDDLKWHRPTIFPSVPRIWES 284
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+GI ++ SA ++ V A + I +Y +K G+ L ++P+ +V++I+ L
Sbjct: 285 VYNGILAKVKKESALKQAVFNAGLSIGASYNRWKARAFGYRL--QIERPATIVSMIERLA 342
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
A + ++ PL L+ L+++ I+ A+G K VSGG +LP +D F AIG+ V GY
Sbjct: 343 AWCVLLVMGPLRGLS-LLIFRPIRQALGGQIKFSVSGGSALPGVVDRFLSAIGLTVLEGY 401
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV--LPAGSKGIVKVRGSQVM 306
G+TE+S VI+ R G+VG PI I++ + + ++V +P G+KG + V+ Q++
Sbjct: 402 GMTETSAVISIRNRNRPTPGTVGTPIGGYTIRLKNEQGHDVSHIP-GAKGTLWVKSDQIL 460
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY++ P + D++G+ +TGD+ + H G L+ GR+KDTI L+ GE
Sbjct: 461 TGYYRRPELNEVVFDKEGFFDTGDL-MLLTHR---------GELMFAGRSKDTIALAGGE 510
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
N+EP+ +E+ L S I Q++V+G +++ GA+IVP
Sbjct: 511 NIEPVPIEDYLLESEFIDQVMVVGDERKTLGALIVP 546
>gi|410942242|ref|ZP_11374029.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410782497|gb|EKR71501.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 645
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 184/335 (54%), Gaps = 16/335 (4%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ ++ LPPWH+ ER G +T++ L DL +P ++SVP V+E+LY+
Sbjct: 235 DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSISTLSQDLADIKPTLLLSVPRVWESLYN 294
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I ++ SS ++ + A I+ Y ++ + L + + S +L L +
Sbjct: 295 KIHDKVRNSSPVQQALFGAFKEIAITY--YRHLSRLQDLEYSLVEQSTFASLWQKLISFW 352
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
I +LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+T
Sbjct: 353 IVILLWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMT 411
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E S + R +G++G I +IK++D + NE+ G KGI +G VM+GY+K
Sbjct: 412 ELSGISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYK 471
Query: 312 NPSATKQALDEDGWLNTGDI-GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P TK L DGWLN+GD+ W G L GRAKDTIVL GEN+EP
Sbjct: 472 EPEKTKDILSSDGWLNSGDLLAWT-----------TSGELKYSGRAKDTIVLLGGENLEP 520
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+E A +RS I+Q +V+G DQ+ GA+IVPDKE
Sbjct: 521 EPIEFALVRSRFIQQAMVVGHDQKTLGALIVPDKE 555
>gi|159466184|ref|XP_001691289.1| long-chain-fatty-acid CoA ligase [Chlamydomonas reinhardtii]
gi|158279261|gb|EDP05022.1| long-chain-fatty-acid CoA ligase [Chlamydomonas reinhardtii]
Length = 555
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 186/356 (52%), Gaps = 85/356 (23%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
+Q+R+L + GD+ LS+LPPWH+YER C YF+
Sbjct: 185 YQVRNLSHFLQVRPGDRVLSLLPPWHIYERTCSYFV------------------------ 220
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
L SG Q+ YT +R+ +
Sbjct: 221 ------------LSSGGQQ---------------------VYTNIRRLRDDLV----AHP 243
Query: 178 PSYLVAL---IDWLWARIICAI-LWPLHLLAEK---------------LVYKKIQSAIGI 218
P +LV + +D L AR++ I P H A LVY+K++ A+G+
Sbjct: 244 PDHLVCVPLVLDTLHARVVQKIQAGPRHRAAIATALLAAGAAYALASVLVYRKVREALGV 303
Query: 219 SKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT--CNVLGSVGHPINH 276
+ +SGGGSL H+D FYEA+G++V G+GL+E++PV+A RR N+ GSVG P
Sbjct: 304 RRTVISGGGSLAAHLDDFYEALGLQVLNGWGLSETAPVLACRRAVEGQNIRGSVGVPTPG 363
Query: 277 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE-DGWLNTGDIGWIA 335
T++++VD E+ LPAG +G+V RG VM GY+++P+A+ +A GW +TGD+GW+A
Sbjct: 364 TQLRVVDPESLAPLPAGRQGLVLARGPGVMPGYWQDPAASAKAFRAGGGWFDTGDLGWVA 423
Query: 336 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 391
P + C G LVL GRAKDT+VLS+G+NVEP +E+A S LI+ +V++GQ
Sbjct: 424 PEGVPASN--CAGHLVLTGRAKDTLVLSSGKNVEPQPVEDAVAASPLIKFVVLVGQ 477
>gi|302338016|ref|YP_003803222.1| AMP-dependent synthetase and ligase [Spirochaeta smaragdinae DSM
11293]
gi|301635201|gb|ADK80628.1| AMP-dependent synthetase and ligase [Spirochaeta smaragdinae DSM
11293]
Length = 634
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 26/373 (6%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRY 115
FQ+ +YD + G LS+LP WH +ERA Y + +RG + Y+ + D+Q+
Sbjct: 212 FQLDRVYDHIQIVPGHILLSVLPVWHSFERAVEYIMLARGAAIAYSKPIGAVMLPDMQKV 271
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
+P ++ SVP ++E + + I K I ++++ + + ++A F + ++
Sbjct: 272 KPQWLASVPRIWEGVRAAIFKNISKEGKVKQLLFSFFVTVGELHSAM------FNMVTDR 325
Query: 176 KQPSYLVALIDWLWARIICAILW---PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
K P + V WL + L P LL LV+ K+++ +G AG+SGGG+LP
Sbjct: 326 K-PDF-VGRHRWLDILLAIIPLILLTPFQLLGSLLVFGKLKARLGGKFIAGISGGGALPP 383
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
++D F++A G+ + GYGLTE+ PV+A R+ V G+VG + E ++VD E VLP
Sbjct: 384 YVDRFFQAAGILLLEGYGLTETGPVLAVRKQKHPVHGTVGPLLADIEHRVVDRE-GVVLP 442
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G KG++ V+ QVM GY+K AT+ L DGWLNTGDI R G +
Sbjct: 443 PGRKGVLYVKSPQVMDGYYKREEATEAVL-HDGWLNTGDITLFT---------RQGEFKI 492
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
L GRAK+TIVL GEN+EP+ +EE S I Q +V+GQD++ A+IVP+ E++ A
Sbjct: 493 L-GRAKETIVLLGGENIEPVPIEEHLCASDAIAQAMVVGQDKKFLAALIVPEMEKLQQYA 551
Query: 412 KRLSIVHADASEL 424
+ I + A EL
Sbjct: 552 QEKGISYIQAEEL 564
>gi|224532255|ref|ZP_03672887.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
gi|224511720|gb|EEF82126.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
Length = 630
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 225/421 (53%), Gaps = 39/421 (9%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTQLGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGF 169
PHY+ +VP ++ + I K++ R++ I+++F Y A Y GF
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLNDICYRAVMGFYPDSGF 322
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
L K+ + LI L+P L L++ KI +G + G++GGGS
Sbjct: 323 SLFFPIKKILGMFGLI----------FLFPFKALGNILIFNKINKILGNNFVVGITGGGS 372
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
+P+ + F+ AIG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N+
Sbjct: 373 MPISVVRFFNAIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNK 432
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+ G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ +
Sbjct: 433 LKKPG-KGILFVKGPQVMLGYYKDREATCRIIGSDGFLNTGDIVKLSKDN---------- 481
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 408
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 482 VVQIIGREKDTIVLNNGENVEPAPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEIN 541
Query: 409 MAAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFT 459
+ + DAS ++ + + E++K ++ + QI ++++PF
Sbjct: 542 KYLESVGQKIFDASNRRQIIANNIVLKAINDEIKKLINRTNGFKPFEQILKFTLLEKPFE 601
Query: 460 V 460
V
Sbjct: 602 V 602
>gi|203284063|ref|YP_002221803.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
gi|201083506|gb|ACH93097.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
Length = 629
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 197/353 (55%), Gaps = 18/353 (5%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++ + RN+ DD++
Sbjct: 203 YQVSSFSRMISVTEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSNIVPRNMLDDIRNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP L+ I++ I + + R L RI + I L
Sbjct: 263 NPHYIAAVP----RLWIAIKQNIVKEISKKNFFVRLLFRIFVKFACINDICRRIILGLYP 318
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
L+ + + + +L+PL++L +V+KKI+ +G + G+SGGGS+P+++
Sbjct: 319 DNGLDLLIPFKKILSILGVIVLFPLNVLGNLIVFKKIKKVLGNNFVVGISGGGSIPLYVV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ AIG+ + YGLTE+SP +A+ ++G+ G + T +I D E L
Sbjct: 379 RFFNAIGINLANAYGLTEASPGVASNEYGKIIVGTSGKILPGTIAEIRD-ENGVKLKKPG 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KG++ ++G QVM GY+++ AT+Q + +DG+L+TGDI ++ + V+ + G
Sbjct: 438 KGVLFIKGPQVMIGYYQDIEATRQVIGDDGFLDTGDIVKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
R KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 488 REKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|386859368|ref|YP_006272074.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
gi|384934249|gb|AFI30922.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
Length = 629
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 197/353 (55%), Gaps = 18/353 (5%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++ + RN+ DD++
Sbjct: 203 YQVSSFSRMISVTEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSNIVPRNMLDDIRNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP L+ I++ I + + R L RI + I L
Sbjct: 263 NPHYIAAVP----RLWIAIKQNIVKEVSKKNFFVRLLFRIFVKFACINDICRRIILGLYP 318
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
L+ + + + +L+PL++L +V+KKI+ +G + G+SGGGS+P+++
Sbjct: 319 DNGLDLLIPFKKILSILGVIVLFPLNVLGNLIVFKKIKKVLGNNFVVGISGGGSIPLYVV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ AIG+ + YGLTE+SP +A+ ++G+ G + T +I D E L
Sbjct: 379 RFFNAIGINLANAYGLTEASPGVASNEYGKIIVGTSGKILPGTIAEIRD-ENGVKLKKPG 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KG++ ++G QVM GY+++ AT+Q + +DG+L+TGDI ++ + V+ + G
Sbjct: 438 KGVLFIKGPQVMIGYYQDIEATRQVIGDDGFLDTGDIVKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
R KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 488 REKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|203287602|ref|YP_002222617.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
gi|201084822|gb|ACH94396.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
Length = 629
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 197/353 (55%), Gaps = 18/353 (5%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++ + RN+ DD++
Sbjct: 203 YQVSSFSRMISVTEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSNIVPRNMLDDIRNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP L+ I++ I + + R L RI + I L
Sbjct: 263 NPHYIAAVP----RLWIAIKQNIVKEISKKNFFVRLLFRIFVKFACISDICRRIILGLYP 318
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
L+ + + + +L+PL++L +V+KKI+ +G + G+SGGGS+P+++
Sbjct: 319 DNGLDLLIPFKKILSILGVIVLFPLNVLGNLIVFKKIKKVLGNNFVVGISGGGSIPLYVV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ AIG+ + YGLTE+SP +A+ ++G+ G + T +I D E L
Sbjct: 379 RFFNAIGINLANAYGLTEASPGVASNEYGKIIVGTSGKILPGTIAEIRD-ENGVKLKKPG 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KG++ ++G QVM GY+++ AT+Q + +DG+L+TGDI ++ + V+ + G
Sbjct: 438 KGVLFIKGPQVMIGYYQDIEATRQVIGDDGFLDTGDIVKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
R KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 488 REKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|119952940|ref|YP_945149.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
gi|119861711|gb|AAX17479.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
Length = 630
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 197/353 (55%), Gaps = 18/353 (5%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++++ RN+ DD++
Sbjct: 203 YQVSSFSRMINTSEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSSIVPRNMLDDMKNV 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP L+ I++ IF A + ++ L +I I L
Sbjct: 263 NPHYIAAVP----RLWIAIKQNIFKEVAKKPFFSKLLFKIFVKSACLNDICYRIILGLYP 318
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
L+ + L + +PL +L + +V+KKI+ +G + G++GGGS+ + +
Sbjct: 319 DNGFDLLFPMKKLLGILGLIFFFPLRVLGDLIVFKKIKKVLGNNFVVGITGGGSMSLSVV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ +IG+++ YGLTE+SP +A+ ++G+ G + T +I D N++ G
Sbjct: 379 RFFNSIGIELANAYGLTEASPGVASNEHEKIMIGTCGRILPETVAEIRDENGNKLKTPG- 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KGI+ ++G QVM GY+++ AT+Q + DG+LNTGDI ++ + V+ + G
Sbjct: 438 KGILFIKGPQVMIGYYQDEDATRQVIGSDGFLNTGDIVKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
R KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 488 REKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|398334435|ref|ZP_10519140.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 628
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 185/344 (53%), Gaps = 16/344 (4%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ ++ LPPWH+ ER G +T++ L DL +P ++SVP V+E+LY+
Sbjct: 218 DRSMAYLPPWHIAERLVETICVRAGGAEAFTSISTLSQDLSDIKPTLLLSVPRVWESLYN 277
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I ++ +S ++ + A I+ Y +K I L + + S +L +
Sbjct: 278 KIHDKVRGASPVQQALFGAFKEIAITY--YKHISRLQGLEYSLTEESTFASLWQKFISLW 335
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
I +LW + +A+ L + KI+ +G + +SG G+LP +ID F+ AIG+ + GYG+T
Sbjct: 336 IVILLWIPNQIAQ-LAFNKIKQGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMT 394
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E S + R +G++G I +IK++D + E+ G KGI +G VM+GY+K
Sbjct: 395 ELSGISTRRILGEITVGTLGRCIPGVQIKLMDEKGKEITKPGVKGIAWHKGDHVMKGYYK 454
Query: 312 NPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP
Sbjct: 455 EPEKTKEILSSDGWLNSGDLLTWT-----------TSGELKYSGRAKDTIVLLGGENLEP 503
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
+E A +RS I Q +V+G DQ+ GA+IVP++E + K L
Sbjct: 504 EPIEFALVRSQFIHQAMVVGHDQKTLGALIVPNEEALEKYLKEL 547
>gi|51598401|ref|YP_072589.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
gi|51572972|gb|AAU06997.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
Length = 630
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 223/421 (52%), Gaps = 39/421 (9%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY------EGF 169
PHY+ +VP ++ + I K++ R++ I+++F RI GF
Sbjct: 263 NPHYIAAVPRLWIAIRQNINKEVSKKPFISRIIFHFFIKLAFLSDICYRIVMGLYPDNGF 322
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
L K+ + LI L+P L L++ KI +G + G++GGGS
Sbjct: 323 NLFFPIKKILGIFGLIS----------LFPFKALGNILIFNKINKILGNNFVVGITGGGS 372
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N+
Sbjct: 373 MPLSVSRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNK 432
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+ G KGI+ V+G QVM GY+K+ AT + + D +LNTGDI ++ +
Sbjct: 433 LKKPG-KGILFVKGPQVMLGYYKDREATCRIIGPDSFLNTGDIAKLSKDN---------- 481
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 408
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 482 VVQIIGREKDTIVLNNGENVEPAPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEIN 541
Query: 409 MAAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFT 459
+ + DA+ +S + + E++K ++ + QI ++++PF
Sbjct: 542 KYLESVGQKIFDANNRRQVISNNIVLKAINDEIKKLINRTNGFKPFEQILKFTLLEKPFE 601
Query: 460 V 460
V
Sbjct: 602 V 602
>gi|219685905|ref|ZP_03540709.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
gi|219672547|gb|EED29582.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
Length = 630
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 202/359 (56%), Gaps = 30/359 (8%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFGLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGF 169
PHY+ +VP ++ + I K++ R++ I+++F Y +Y GF
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLNDICYRTVMGLYPDNGF 322
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
L K+ + LI C L+P L L++ K+ +G + G++GGGS
Sbjct: 323 NLFCPIKKILGIFGLI--------C--LFPFKALGNILIFNKLNKILGNNFVVGITGGGS 372
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N+
Sbjct: 373 MPLSVARFFNSIGIELANAYGLTETSPGVASNKHKKLIIGTCGKILPGTVAEIRDADGNK 432
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+ G KGI+ V+G QVM GY+K+ AT++ + DG+LNTGDI ++ +
Sbjct: 433 LKKPG-KGILFVKGPQVMLGYYKDREATRRIIGPDGFLNTGDIAKLSKDN---------- 481
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 482 VVQIIGREKDTIVLNNGENVEPAPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|219684804|ref|ZP_03539746.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
gi|219671749|gb|EED28804.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
Length = 630
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 202/359 (56%), Gaps = 30/359 (8%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFGLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGF 169
PHY+ +VP ++ + I K++ R++ I+++F Y +Y GF
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLNDICYRTVMGLYPDNGF 322
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
L K+ + LI C L+P L L++ K+ +G + G++GGGS
Sbjct: 323 NLFCPIKKILGIFGLI--------C--LFPFKALGNILIFNKLNKILGNNFVVGITGGGS 372
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N+
Sbjct: 373 MPLSVARFFNSIGIELANAYGLTETSPGVASNKHKKLIIGTCGKILPGTVAEIRDADGNK 432
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+ G KGI+ V+G QVM GY+K+ AT++ + DG+LNTGDI ++ +
Sbjct: 433 LKKPG-KGILFVKGPQVMLGYYKDREATRRIIGPDGFLNTGDIAKLSKDN---------- 481
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 482 VVQIIGREKDTIVLNNGENVEPAPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|398343925|ref|ZP_10528628.1| long-chain-fatty-acid--CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 630
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 185/338 (54%), Gaps = 15/338 (4%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 130
+ D +S+LPPWH +ERA Y I G E + + + NLK+DL+ ++P SVP ++E+L
Sbjct: 220 SSDSGISLLPPWHAFERAIEYCIVELGAEFLVSNINNLKEDLKEFKPTLFPSVPRIWESL 279
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+GI ++ S +RV+ +++ ++ K I G+ +P ++ L+ L A
Sbjct: 280 YNGIMNKVAKESPIKRVLFDFFLKVGMSWAEKKSILFGYDF--RIMRPDPMLRLLQKLSA 337
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
L PL L A L+++ + A+G + VS G +LP +D F IG+ V GYG
Sbjct: 338 FFGLIFLSPLKLGA-ILIFRGVHQALGGRLRVSVSAGSALPSVVDKFLSGIGLIVLEGYG 396
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
+TE+S V++ R+ G+VG PI E I D ET + G KG + ++ QV+ GY
Sbjct: 397 MTETSAVLSIRKANRPSPGTVGTPIAGYECIIKD-ETGNPVAQGKKGSLWIKSKQVLIGY 455
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+K P D++G+ +TGDI + LV GRAKDTIVL+ GENVE
Sbjct: 456 YKRPELNAVVFDKNGFFDTGDIMRFNYRNE----------LVFTGRAKDTIVLAGGENVE 505
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
P+ +E+ L S I Q++V G + + A+IVPD E++
Sbjct: 506 PVPVEDQLLNSPYINQVMVTGHEAKHLVALIVPDFEKL 543
>gi|343127459|ref|YP_004777390.1| AMP-binding protein [Borrelia bissettii DN127]
gi|342222147|gb|AEL18325.1| AMP-binding enzyme family protein [Borrelia bissettii DN127]
Length = 630
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 226/421 (53%), Gaps = 39/421 (9%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGF 169
PHY+ +VP ++ + I K++ R++ ++ +F Y +Y GF
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKSAFLSDICYRVVMGLYPDNGF 322
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
L K+ ++ LI C L+P L L++ KI +G + G++GGGS
Sbjct: 323 SLFFPIKKILGILGLI--------C--LFPFKALGNILIFNKINKILGNNFVVGITGGGS 372
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
+P+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N+
Sbjct: 373 MPLSAARFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNK 432
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+ G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ +
Sbjct: 433 LKKPG-KGILFVKGPQVMLGYYKDKEATCRIIGPDGFLNTGDIAKLSKDN---------- 481
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 408
V+ + GR KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 482 VVQIIGREKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEIN 541
Query: 409 MAAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFT 459
+ + DA+ ++ + + E++K +K + QI ++++PF
Sbjct: 542 KYLESVGQKIFDANNRRQIIANNIVLKAINDEIKKLINKTNGFKPFEQILKFTLLEKPFE 601
Query: 460 V 460
V
Sbjct: 602 V 602
>gi|374586245|ref|ZP_09659337.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875106|gb|EHQ07100.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 630
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 204/349 (58%), Gaps = 20/349 (5%)
Query: 60 IRSLYDIVP---AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 116
I + +++P A GD+ +S+LPPWHV+E+ Y G++ M T + LK+DL+ ++
Sbjct: 205 IACVENVIPRLQARKGDRAISLLPPWHVFEQVIEYAFLYLGLQFMITDISLLKEDLKEFK 264
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P SVP ++E++Y+GI ++ S A++ V + + + + + G+ L +
Sbjct: 265 PTIFPSVPRIWESVYNGIIGKVKKESTAKQKVFNFFLSVGATWHRWHAVAFGYDL--QIE 322
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+P+ + +L+ L +L L K+++K I+ A+G + +SGG +LP +D
Sbjct: 323 KPNAIASLLRRL-LAFFVLLLLSPLKLLSKVIFKGIREALGGQMRVSLSGGSALPGVVDR 381
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV--LPAG 293
F A+G++V GYG+TE+S VI+AR V G++G P++ EI++ + + +V +P G
Sbjct: 382 FLSAVGLRVLEGYGMTETSAVISARLIEGPVSGTIGKPLDGYEIRLKNEQGVDVKHIP-G 440
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
+KG + V+ QVM+GY++ P D+DG+ +TGD+ + G LV
Sbjct: 441 AKGTLWVKSVQVMKGYYRRPELNDIVFDKDGFFDTGDLMMLTHR----------GELVFA 490
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
GRAKDTIVL++GEN+EP+ LE+ L S I Q++V+G D++ P A+IVP
Sbjct: 491 GRAKDTIVLASGENLEPVPLEDRLLISDYIDQVMVVGDDKKYPAALIVP 539
>gi|410678889|ref|YP_006931291.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
gi|408536277|gb|AFU74408.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
Length = 630
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 200/359 (55%), Gaps = 30/359 (8%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTKVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIRNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGF 169
PHY+ +VP ++ + I K++ R++ I+++F Y A +Y GF
Sbjct: 263 NPHYIAAVPRLWIAIKQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRAVMGLYPDNGF 322
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
L K+ LI C L+P L L++ KI +G + G++GGGS
Sbjct: 323 SLFFPMKKILGTFGLI--------C--LFPFKALGNILIFNKINKILGNNFVVGITGGGS 372
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N+
Sbjct: 373 MPVSVVRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDVDGNK 432
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+ G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ +
Sbjct: 433 LKKPG-KGILFVKGPQVMLGYYKDREATCKIIGSDGFLNTGDIAKLSKDN---------- 481
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 482 VVQIIGREKDTIVLNNGENVEPGPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|386853545|ref|YP_006202830.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
gi|365193579|gb|AEW68477.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
Length = 630
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 223/421 (52%), Gaps = 39/421 (9%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY------EGF 169
PHY+ +VP ++ + I K++ R++ I+++F RI GF
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRIVMGLYPDNGF 322
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
L K+ + LI L+P L L++ KI +G + G++GGGS
Sbjct: 323 NLFFPIKKILGIFGLIS----------LFPFKALGNILIFNKINKILGNNFVVGITGGGS 372
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N+
Sbjct: 373 MPLSVARFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNK 432
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+ G KGI+ V+G QVM GY+K+ AT + + D +LNTGDI ++ +
Sbjct: 433 LKKPG-KGILFVKGPQVMLGYYKDREATCRIIGTDSFLNTGDIAKLSKDN---------- 481
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 408
V+ + GR KDTIVL+ GENVEP +E S LI + +V+GQDQ+ GA+I+P+ EE+
Sbjct: 482 VVQIIGREKDTIVLNNGENVEPAPIEIKLEESILIEKAIVVGQDQKFLGALILPNFEEIN 541
Query: 409 MAAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFT 459
+ + DA+ +S + + E++K ++ + QI ++++PF
Sbjct: 542 KYLESVGQKIFDANNRRQVISNNIVLKAINDEIKKLINRTNGFKPFEQILKFTLLEKPFE 601
Query: 460 V 460
V
Sbjct: 602 V 602
>gi|408670769|ref|YP_006870840.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
gi|407240591|gb|AFT83474.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
Length = 630
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 223/421 (52%), Gaps = 39/421 (9%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKSI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY------EGF 169
PHY+ +VP ++ + I K++ R++ I+++F RI GF
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRIVMGLYPDNGF 322
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
L K+ + LI L+P L L++ KI +G + G++GGGS
Sbjct: 323 NLFFPIKKILGIFGLIS----------LFPFKALGNILIFNKINKILGNNFVVGITGGGS 372
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N+
Sbjct: 373 MPLSVARFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNK 432
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+ G KGI+ V+G QVM GY+K+ AT + + D +LNTGDI ++ +
Sbjct: 433 LKKPG-KGILFVKGPQVMLGYYKDREATCRIIGADSFLNTGDIAKLSKDN---------- 481
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 408
V+ + GR KDTIVL+ GENVEP +E S LI + +V+GQDQ+ GA+I+P+ EE+
Sbjct: 482 VVQIIGREKDTIVLNNGENVEPAPIEIKLEESILIEKAIVVGQDQKFLGALILPNFEEIN 541
Query: 409 MAAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFT 459
+ + DA+ +S + + E++K ++ + QI ++++PF
Sbjct: 542 KYLESVGQKIFDANNRRQVISNNIVLKAINDEIKKLINRTNGFKPFEQILKFTLLEKPFE 601
Query: 460 V 460
V
Sbjct: 602 V 602
>gi|183220510|ref|YP_001838506.1| long-chain acyl-CoA synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910619|ref|YP_001962174.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775295|gb|ABZ93596.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778932|gb|ABZ97230.1| Long-chain acyl-CoA synthetase, AMP-forming (Acyl-CoA synthetase)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 639
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 221/398 (55%), Gaps = 26/398 (6%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 130
+ D +S+LPPWH +ERA Y G++ + + + +LKDDL+ ++P SVP ++E++
Sbjct: 228 SNDNAVSLLPPWHAFERAIEYAGIFLGLDFLISNMTSLKDDLRDFRPTIFPSVPRIWESV 287
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+GI ++ + + +++ + F ++ GF ++P++LV++ +A
Sbjct: 288 YNGIMAKVAKEGGFKEKLFHFFLKVGATWARFFAMFMGFEF--EIQKPNFLVSICKRTYA 345
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
+I +L PL LL+ K ++ I A+G + +S G +LP +D F AIG+KV GYG
Sbjct: 346 LVILILLSPLKLLSIK-IFSAIHKALGGRIRICISAGSALPSVVDGFLSAIGLKVLEGYG 404
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA-GSKGIVKVRGSQVMQG 308
+TE+S V++ R T G+VG PI+ I++ D ET +VL G KG + ++ Q+++G
Sbjct: 405 MTETSAVVSIRSNTKPTKGTVGIPIDGYSIRLKD-ETGKVLTKIGEKGTLWIKSKQILKG 463
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P + D DG+ +TGD+ I+ + LV GR+KDTI L GENV
Sbjct: 464 YYKRPELNQVVFDADGFFDTGDLMMISHRNE----------LVFAGRSKDTIALIGGENV 513
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
EP+ +E+ L S I Q++V+G D++ A+IVP+ E V +K I+ A E +
Sbjct: 514 EPIPIEDKLLTSPYIDQVMVVGHDKKTLAALIVPNFEAV--ESKIQGILKEKAIEWNTNP 571
Query: 429 TISLLY-GELRKWTSK----CSFQIGP---IHVVDEPF 458
+ L+ E+ K S+ SF++ P +VV PF
Sbjct: 572 KVRELFRSEISKIISRDNGFKSFEMIPANNFYVVPRPF 609
>gi|387827058|ref|YP_005806340.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
gi|312149486|gb|ADQ29557.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
Length = 630
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 223/415 (53%), Gaps = 27/415 (6%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNV 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNG 321
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+
Sbjct: 322 FSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G
Sbjct: 379 RFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDTDGNKLKKPG- 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + G
Sbjct: 438 KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 488 REKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESV 547
Query: 415 SIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 460
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 548 GQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|225551923|ref|ZP_03772863.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
gi|225370921|gb|EEH00351.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
Length = 630
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 223/415 (53%), Gaps = 27/415 (6%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNV 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNG 321
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+
Sbjct: 322 FSLFFPIKKILGIFG-LICA--FPFKALGNILIFNKINKILGNNFVVGITGGGSMPLSAF 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G
Sbjct: 379 RFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTLAEIRDTDGNKLKKPG- 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + G
Sbjct: 438 KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 488 REKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESV 547
Query: 415 SIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 460
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 548 GQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|225549259|ref|ZP_03770232.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
gi|225370117|gb|EEG99557.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
Length = 630
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 223/415 (53%), Gaps = 27/415 (6%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNV 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNG 321
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+
Sbjct: 322 FSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G
Sbjct: 379 RFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPG- 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + G
Sbjct: 438 KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 488 REKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESV 547
Query: 415 SIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 460
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 548 GQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|384107950|ref|ZP_10008847.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
gi|383870334|gb|EID85937.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
Length = 652
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 196/374 (52%), Gaps = 23/374 (6%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT--AVRNLKDDLQRYQ 116
Q+ ++D + + GD ++++LP WHV+ER Y L Y+ A L D+ +
Sbjct: 224 QLSVIHDFITCKQGDWWMTILPVWHVFERLIQYVAVHMKCGLAYSKPAAPVLLPDMAVIR 283
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P ++ VP ++E L SG+ + + + + I Y + G N
Sbjct: 284 PQWICGVPRLWEALASGVIRTMKKTGGLTLKLFNFFIGAGSLYAKMRDYVFG-----NIP 338
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
Q L+D + I +LWPLH L + LV++KI++ +G +SGGG+L ID
Sbjct: 339 QFKKRCRLLDSIIGFIPWILLWPLHKLGDILVFRKIRAKMGGRINIAISGGGALQKDIDD 398
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE-----TNEVL 290
FY AIG+ + GYG++E++PV++ R G VG E++IV E + E L
Sbjct: 399 FYRAIGLNLLEGYGMSETAPVVSFRDYRHPRPGVVGVIFPTMEVRIVAEEHGSIVSMEHL 458
Query: 291 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 350
G +G++ +R QVM+GY+K P T++ LD GWLNTGD+G + + +
Sbjct: 459 GPGRQGLIVLRSPQVMKGYYKRPDLTEKVLDRAGWLNTGDLGMMTLDNE----------I 508
Query: 351 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 410
+ GRAKDTIVL GENVEP+ +E A L S+ I I+V GQD++ GA+IVP K+ ++
Sbjct: 509 KITGRAKDTIVLLDGENVEPVIIESALLESNYIESIMVTGQDKKYLGALIVPVKDALIAF 568
Query: 411 AKRLSIVHADASEL 424
A ++ + L
Sbjct: 569 ASENNLAYTSYENL 582
>gi|216263809|ref|ZP_03435803.1| putative AMP-binding enzyme [Borrelia afzelii ACA-1]
gi|215979853|gb|EEC20675.1| putative AMP-binding enzyme [Borrelia afzelii ACA-1]
Length = 630
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 200/359 (55%), Gaps = 30/359 (8%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTKVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIRNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGF 169
PHY+ +VP ++ + I K++ R++ I+++F Y A +Y GF
Sbjct: 263 NPHYIAAVPRLWIAIKQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRAVMGLYPDNGF 322
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
L K+ LI C L+P L L++ KI +G + G++GGGS
Sbjct: 323 SLFFPIKKILGTFGLI--------C--LFPFKALGNILIFNKINKILGNNFVVGITGGGS 372
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N+
Sbjct: 373 MPVSVVRFFNSIGIELANAYGLTETSPGVASNKHKRVIIGTCGKILPGTVAEIRDVDGNK 432
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+ G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ +
Sbjct: 433 LKKPG-KGILFVKGPQVMLGYYKDREATCKIIGSDGFLNTGDIAKLSKDN---------- 481
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 482 VVQIIGREKDTIVLNNGENVEPGPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|216264699|ref|ZP_03436691.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
gi|215981172|gb|EEC21979.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
Length = 630
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 223/415 (53%), Gaps = 27/415 (6%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNV 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNG 321
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+
Sbjct: 322 FSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G
Sbjct: 379 RFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPG- 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + G
Sbjct: 438 KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 488 REKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESV 547
Query: 415 SIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 460
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 548 GQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|398348947|ref|ZP_10533650.1| long-chain-fatty-acid--CoA ligase [Leptospira broomii str. 5399]
Length = 630
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 184/338 (54%), Gaps = 15/338 (4%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 130
+ D +S+LPPWH +ERA Y I G + + + NLK+DL+ ++P SVP ++E+L
Sbjct: 220 SSDSGISLLPPWHAFERAIEYCIIELGAAFLVSNINNLKEDLKEFKPTLFPSVPRIWESL 279
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+GI ++ S+ +R + +++ ++ K I G+ +P+ +V L+ L A
Sbjct: 280 YNGIMNKVARESSFKRALFDFFLKVGMSWAEKKSILFGYDF--RIMKPNSMVRLMQKLGA 337
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
L PL L A L+++ + A+G + VS G +LP +D F IG+ V GYG
Sbjct: 338 FFGLVSLLPLKLGA-ILIFRGVHQALGGRLRVSVSAGSALPSVVDKFLSGIGLIVLEGYG 396
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
+TE+S V++ R+ G+VG PI E I D N V G KG + ++ QV+ GY
Sbjct: 397 MTETSAVLSIRKANRPSPGTVGTPIAGYECIIKDEAGNPV-AQGKKGSLWIKSKQVLIGY 455
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+K P D++G+ +TGDI + LV GRAKDTIVL+ GENVE
Sbjct: 456 YKRPELNAVVFDKNGFFDTGDIMRFNYRNE----------LVFTGRAKDTIVLAGGENVE 505
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
P+ +E+ L S I Q++V G + + A+IVPD E++
Sbjct: 506 PVPVEDQLLNSPYINQVMVTGHEAKHLVALIVPDFEKL 543
>gi|15594482|ref|NP_212271.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|195941874|ref|ZP_03087256.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|195942358|ref|ZP_03087740.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|195942377|ref|ZP_03087759.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|195942400|ref|ZP_03087782.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|218249890|ref|YP_002374665.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
gi|223889090|ref|ZP_03623679.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|226321952|ref|ZP_03797477.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
gi|2688028|gb|AAC66529.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|218165078|gb|ACK75139.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
gi|223885339|gb|EEF56440.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|226232542|gb|EEH31296.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
Length = 630
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 223/415 (53%), Gaps = 27/415 (6%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNV 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNG 321
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+
Sbjct: 322 FSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G
Sbjct: 379 RFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPG- 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + G
Sbjct: 438 KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 488 REKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESV 547
Query: 415 SIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 460
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 548 GQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|359689012|ref|ZP_09259013.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418748800|ref|ZP_13305092.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418756178|ref|ZP_13312366.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384115849|gb|EIE02106.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404275869|gb|EJZ43183.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 630
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 188/341 (55%), Gaps = 21/341 (6%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 130
+ D +S+LPPWH +ERA Y I G + + + NLK+DL+ +QP SVP ++E+L
Sbjct: 220 SADSGVSLLPPWHAFERAIEYCILELGAGFLVSNISNLKEDLKEFQPTLFPSVPRIWESL 279
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW- 189
Y+GI ++ S+ +R V ++I + K + G+ K+P+++V W +
Sbjct: 280 YNGIMNKVSKESSLKRAVFNFCLKIGNLWAVQKGVLFGYDF--RIKKPNFIV----WTFS 333
Query: 190 --ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
+ ++ L L LV+K I SA+G + VS G +LP +D F +IG+ V
Sbjct: 334 KLSSLVLLTLLSPLKLLALLVFKPIHSALGGKLRVSVSAGSALPSVVDKFLSSIGLIVLE 393
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYG+TE+S V++ R+P G+VG PI E + D N ++P G KG + V+ QV+
Sbjct: 394 GYGMTETSAVLSIRKPKQPSPGTVGTPIQGYECILKDEHGN-IVPQGGKGSLWVKSKQVL 452
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY+K P D++G+ +TGDI R R G LV GRAKDTIVL+ GE
Sbjct: 453 MGYYKRPELNDVVFDKNGFFDTGDI-------MRFNYR---GELVFAGRAKDTIVLAGGE 502
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
NVEP+ +E+ L S + Q++V G + + +IVPD E +
Sbjct: 503 NVEPVPIEDQLLNSPYVNQVMVTGHEAKHLVVLIVPDFERL 543
>gi|226320671|ref|ZP_03796229.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
gi|226233887|gb|EEH32610.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
Length = 630
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 223/415 (53%), Gaps = 27/415 (6%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNV 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNG 321
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+
Sbjct: 322 FSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G
Sbjct: 379 RFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPG- 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + G
Sbjct: 438 KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 488 REKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESV 547
Query: 415 SIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 460
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 548 GQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|224532780|ref|ZP_03673396.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
gi|224512268|gb|EEF82653.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
Length = 617
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 198/353 (56%), Gaps = 18/353 (5%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNV 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNG 321
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+
Sbjct: 322 FSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G
Sbjct: 379 RFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDTDGNKLKKPG- 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + G
Sbjct: 438 KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
R KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 488 REKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|221217462|ref|ZP_03588933.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|224533985|ref|ZP_03674569.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225549859|ref|ZP_03770821.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
gi|221192740|gb|EEE18956.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|224512821|gb|EEF83188.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225369550|gb|EEG99001.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
Length = 630
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 223/415 (53%), Gaps = 27/415 (6%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNV 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNG 321
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+
Sbjct: 322 FSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G
Sbjct: 379 RFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPG- 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + G
Sbjct: 438 KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 488 REKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESV 547
Query: 415 SIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 460
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 548 GQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|387825795|ref|YP_005805248.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
gi|312147986|gb|ADQ30645.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
Length = 630
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 223/415 (53%), Gaps = 27/415 (6%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNV 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNG 321
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+
Sbjct: 322 FSLFFPIKKILGIFG-LICA--FPFKALGSVLIFNKINKILGNNFVVGITGGGSMPLSAV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G
Sbjct: 379 RFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPG- 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + G
Sbjct: 438 KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 488 REKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESV 547
Query: 415 SIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 460
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 548 GQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|111114960|ref|YP_709578.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|384206637|ref|YP_005592358.1| AMP-binding protein [Borrelia afzelii PKo]
gi|110890234|gb|ABH01402.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|342856520|gb|AEL69368.1| AMP-binding enzyme family protein [Borrelia afzelii PKo]
Length = 630
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 200/359 (55%), Gaps = 30/359 (8%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++
Sbjct: 203 YQVSSFSLMVDTKVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIRNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGF 169
PHY+ +VP ++ + I K++ R++ I+++F Y A +Y GF
Sbjct: 263 NPHYIAAVPRLWIAIKQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRAVMGLYPDNGF 322
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
L K+ LI C L+P L L++ KI +G + G++GGGS
Sbjct: 323 SLFFPIKKILGTFGLI--------C--LFPFKALGNILIFNKINKILGNNFVVGITGGGS 372
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N+
Sbjct: 373 MPVPVVRFFNSIGIELANAYGLTETSPGVASNKHKRVIIGTCGKILPGTVAEIRDVDGNK 432
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+ G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ +
Sbjct: 433 LKKPG-KGILFVKGPQVMLGYYKDREATCKIIGSDGFLNTGDIAKLSKDN---------- 481
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 482 VVQIIGREKDTIVLNNGENVEPGPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|332297617|ref|YP_004439539.1| 4-coumarate--CoA ligase [Treponema brennaborense DSM 12168]
gi|332180720|gb|AEE16408.1| Long-chain-fatty-acid--CoA ligase., 4-coumarate--CoA ligase
[Treponema brennaborense DSM 12168]
Length = 653
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 189/351 (53%), Gaps = 23/351 (6%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT--AVRNLKDDLQRYQPHYMISVPLVY 127
E+GD +LS+LP WH +ER Y + L Y+ + D+ +P M VP ++
Sbjct: 236 EDGDLWLSVLPVWHSFERVFQYLVMGLNSGLAYSKPVAAVMLADMATLRPQAMCGVPRLW 295
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E+L G+ + + + + I + ++ + G +++ ++D
Sbjct: 296 ESLAQGVFRTMRKTGGVPYKLFLFFISVGKKFSWAREHVRGLVCRLHRRS-----RILDA 350
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
L + +L PL+ L LVY+KI++ +G + +SGGG+L D FY AIG K+
Sbjct: 351 LVGILPLILLSPLYALGNLLVYRKIRAKLGGRMECAISGGGALQSETDAFYRAIGFKLLE 410
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE-----TNEVLPAGSKGIVKVR 301
GYG+TE++PV++ R P+ G VG +IK+V E + E LP G G+V R
Sbjct: 411 GYGITEAAPVLSVRWPSKPRSGCVGQVYPCAQIKVVAEEHGRIVSGEPLPPGKSGLVLAR 470
Query: 302 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 361
G Q+M+GY+K P T+Q +D+DGWLNTGD+G ++ + + + GRAKDTIV
Sbjct: 471 GRQIMKGYYKRPDLTEQVVDKDGWLNTGDLGVLSYDNE----------IKITGRAKDTIV 520
Query: 362 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 412
L GEN+EPL +E A S I V+ GQD++ GA+IVP KE +L A+
Sbjct: 521 LLGGENIEPLVIESALCGSPYIESAVIQGQDKKYLGALIVPVKEAILTFAQ 571
>gi|398335017|ref|ZP_10519722.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 631
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/333 (34%), Positives = 185/333 (55%), Gaps = 15/333 (4%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D +S+LPPWH +ERA Y + G+ + + + +L+DDL+ ++P SVP ++E+LY+
Sbjct: 222 DSGVSLLPPWHAFERAIEYCTVALGVTFLISNITSLRDDLKEFRPTLFPSVPRIWESLYN 281
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
GI ++ SA +R + +++ ++ K I G+ ++P +L L A I
Sbjct: 282 GIMTKVSKESALKRNLFHFFLKVGMIWSHNKSILFGYDF--QLEKPFFLSQLFKRTIALI 339
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
+L+PL L A +++ + A+G + VS G +LP +D F AIG+ V GYG+T
Sbjct: 340 KLVLLFPLKLGAIG-IFQSVHKALGGRLRVSVSAGSALPSVVDKFLSAIGLIVLEGYGMT 398
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS-KGIVKVRGSQVMQGYF 310
E+S V + R P G+VG P++ E ++ D VL S KG + ++ Q++ GY+
Sbjct: 399 ETSAVTSIRDPHRPSSGTVGIPVDGYEYRLKDERGGFVLNGHSQKGTLWLKSKQILMGYY 458
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P + D++G+ +TGDI I + RG L GRAKDTIVL+ GENVEP
Sbjct: 459 KRPELNEVVFDKEGFFDTGDIMRI---NYRGE-------LSFAGRAKDTIVLAGGENVEP 508
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
+ +E+ L S I Q++V G + + +IVPD
Sbjct: 509 VPIEDQLLNSPYINQVMVTGHESKHLVVLIVPD 541
>gi|392405544|ref|YP_006442156.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390613498|gb|AFM14650.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 631
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 185/338 (54%), Gaps = 17/338 (5%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D LS+LPPWH +ERA Y + E M + + L+ DL ++P SVP ++E+LY+
Sbjct: 222 DTALSLLPPWHAFERAVEYGVMMAQCEFMISGINTLRQDLGDFKPTSFPSVPRIWESLYN 281
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
GI +++ S +R V + + A+ + I+ G+ L Q +P + + A
Sbjct: 282 GIMQKLEKESPVKRNVFYFFLDVGAAWAKHEAIFNGYDL---QVKPKPALQQVLDRAASG 338
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIG--ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
LA + V+ I A+G +SK+ SGG +LP +D F AIG+KV GYG+
Sbjct: 339 AVLAALLPLKLASQAVFAPIHQALGGNVSKS-ASGGSALPQVVDRFLTAIGIKVLEGYGM 397
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV-LPAGSKGIVKVRGSQVMQGY 309
TE+S +I+ R V G+VG P +IK+ + EV L G+KG + V +Q++ GY
Sbjct: 398 TETSALISLRDVQKPVSGTVGRPFPGYKIKLKNDLGAEVPLAPGAKGTLWVHSNQLLLGY 457
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+K P D+DG+ +TGDI + G L+ GR+K+TI L+ GEN+E
Sbjct: 458 YKRPELNAVIFDKDGFFDTGDIMVLT----------AAGDLMFAGRSKETIALAGGENIE 507
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
P+ +E+ L S I Q++++G D++ GAIIVP+ E+V
Sbjct: 508 PVPIEDKLLASEFIDQVMIVGDDRKTLGAIIVPNFEKV 545
>gi|359688035|ref|ZP_09258036.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418747832|ref|ZP_13304127.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418758109|ref|ZP_13314293.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384114816|gb|EIE01077.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404276682|gb|EJZ43993.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 644
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 181/335 (54%), Gaps = 17/335 (5%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
D+ ++ LPPWH+ ER G +T++ +L DLQ +P +++SVP V+E+ Y+
Sbjct: 235 DRTMAYLPPWHIAERLIETACVRAGASEAFTSISSLGQDLQDIKPTFLLSVPRVWESFYN 294
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
+Q ++ +S + + ++ + +Y +K G + +P + +
Sbjct: 295 KVQDKLKDASPVAKFIFKSFQSAANSYYKYKSRLLGLEFSL---KPRSFFGEFFHRMSGL 351
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
W + + +L++ KI+ ++G K +SG G+LP +ID F+ +IG+ + GYG+T
Sbjct: 352 FGTFFWFVPNILAQLLFSKIRKSLGGRLKFAISGAGALPEYIDRFFNSIGIPILEGYGMT 411
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E+S RR +G++G I EIKI+D + E+ G KGI +G +MQGY+
Sbjct: 412 ETSGASTRRRLDRITVGTLGKCIPGVEIKILDEKGEEIHEPGVKGIAWHKGGHIMQGYYL 471
Query: 312 NPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
+P T + + +DGWLN+GD + W A G L GRAKDTIVL GEN+EP
Sbjct: 472 DPEKTAETM-KDGWLNSGDLLLWTAQ-----------GELKYAGRAKDTIVLLGGENLEP 519
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+E A +S LI Q +++G DQ+ A++VPD E
Sbjct: 520 EPIEFALTQSELILQAMIVGHDQKTLSALLVPDWE 554
>gi|374585933|ref|ZP_09659025.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373874794|gb|EHQ06788.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 638
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 204/407 (50%), Gaps = 38/407 (9%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLY 131
GD + LPPWH ER F G + +T V L DL+ +P ++ +VP V+E Y
Sbjct: 226 GDITMGFLPPWHSGERMFETICFYSGAAVAFTTVAELARDLKAIRPTFLFTVPRVWENFY 285
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY--LVALIDWLW 189
I Q+ S+A R + + ++ + ++ R L R + + L L+
Sbjct: 286 GKILDQLKGSAAFSRFLFQLFVKTACSF----RAALDTVLDRQVRLTASRSLSELVKIPV 341
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
A +I L P+ L+A +L +KI + +G + +G G+L +D F+ +IG+ + Y
Sbjct: 342 AALIVLALLPVALIA-RLFLRKILAVLGGRVRFAFAGAGALQPEVDRFFHSIGLPLLEVY 400
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE+S V R V G+VG P+ EI++V+ + G KG+ RG M+G
Sbjct: 401 GMTENSGVSTIRHLNRFVTGTVGRPLTGVEIRLVNDRKETITEPGIKGVALHRGPHNMKG 460
Query: 309 YFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
Y++ P T +D +GWLN+GD + W A G L GRAKDTIVLS GEN
Sbjct: 461 YYREPEKTAAIIDAEGWLNSGDLLMWTAQ-----------GDLKFAGRAKDTIVLSGGEN 509
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--------MAAKRLSIVHA 419
VEP +E + +S +VV+GQD++ GA+IVP +E++L +RL
Sbjct: 510 VEPEPIENSLKQSEYFTHVVVVGQDRKTLGALIVPKREKLLPLLNGSAPSDPERLEEALN 569
Query: 420 DASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 461
+ E++K L+ E++K+ S K ++ H++ FTVN
Sbjct: 570 QSEEIAK-----LVREEIKKYVSQETGYKAFERVTTFHILGGDFTVN 611
>gi|398341584|ref|ZP_10526287.1| long-chain-fatty-acid--CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 644
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 182/343 (53%), Gaps = 17/343 (4%)
Query: 65 DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVP 124
D + D+ ++ LPPWH+ ER G +T++ +L DLQ +P +++SVP
Sbjct: 227 DDIQFNADDRTMAYLPPWHIAERLIETGCIRIGASEAFTSISSLAQDLQEIRPTFLLSVP 286
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
V+E+ Y+ I + +S R + + +F + +K +G L ++ S
Sbjct: 287 RVWESFYNKIHDKSREASPLARFLFKIFQGAAFTFHKYKSRLQG--LEYMLERISIFREF 344
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
A ++ A L+P +LLA + +I++ +G K +SG G+LP +ID F+ +IG+
Sbjct: 345 ARRAVALLVVAFLFPANLLA-MAAFSRIRNGLGGRLKFALSGAGALPEYIDRFFNSIGIP 403
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
+ GYG+TE V RR +G++G I EIK++D E+ G KGI +G
Sbjct: 404 ILEGYGMTELGGVSTRRRLNSITVGTLGRCIPGVEIKLIDERGKEIHEPGVKGIAWHKGP 463
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
VM GY+K+P T + + DGWLN+GD + W G L GRAKDTIVL
Sbjct: 464 HVMMGYYKDPEKTAEII-VDGWLNSGDLLLWT-----------VQGELKYAGRAKDTIVL 511
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
S GEN+EP +E A +S LI Q +++G D++ A++VPD E
Sbjct: 512 SGGENLEPEPIEFALTQSELILQAMIVGHDKKALSALLVPDWE 554
>gi|224534428|ref|ZP_03675006.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
gi|224514530|gb|EEF84846.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
Length = 630
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 198/353 (56%), Gaps = 18/353 (5%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRY 115
+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + +D++
Sbjct: 203 YQVSSFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLNDIKNI 262
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
PHY+ +VP ++ + I K++ R++ ++++F R+ G N
Sbjct: 263 NPHYIAAVPRLWIAIRQNIYKEVSKKPFIFRIIFHFFVKLAFLSDICYRVVMGL-YPDNG 321
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+ + I + +IC L+P L L++ KI +G + G++GGGS+ + +
Sbjct: 322 FSLFFPIKKILGTFG-LIC--LFPFKALGNILIFNKINKILGNNFVVGITGGGSMSLSVV 378
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N++ G
Sbjct: 379 RFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNKLEKPG- 437
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
KGI+ V+G QVM GY+ + AT + + DG+LNTGDI ++ + V+ + G
Sbjct: 438 KGILFVKGPQVMLGYYNDREATCRIIGSDGFLNTGDIAKLSKDN----------VVQIIG 487
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
R KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 488 REKDTIVLNNGENVEPGPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|417782916|ref|ZP_12430639.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|418733600|ref|ZP_13290724.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|409953617|gb|EKO08113.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|410773209|gb|EKR53240.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
Length = 624
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 204/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 198 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 257
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 258 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 317
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 318 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 375
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 376 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 435
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 436 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 484
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 485 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 544
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K I+ + + K ++K F +I IH++ + F
Sbjct: 545 KDPTEWSSSKEITTFFKNIVKDKISTKAGFKSFEKIAHIHILSKEF 590
>gi|418672585|ref|ZP_13233921.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410580273|gb|EKQ48098.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
Length = 645
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 204/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 219 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 279 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 339 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 396
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 397 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 456
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 457 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 505
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 506 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 565
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K I+ + + K ++K F +I +H++ + F
Sbjct: 566 KDPTEWSSSKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|417760957|ref|ZP_12408971.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417773540|ref|ZP_12421417.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|418667876|ref|ZP_13229281.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|409942951|gb|EKN88554.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|410576628|gb|EKQ39633.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410756321|gb|EKR17946.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|455790425|gb|EMF42291.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 624
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 204/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 198 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 257
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 258 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 317
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 318 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 375
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 376 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 435
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 436 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 484
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 485 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 544
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K I+ + + K ++K F +I +H++ + F
Sbjct: 545 KDPTEWSSSKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|417763927|ref|ZP_12411900.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400353759|gb|EJP05912.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|456821587|gb|EMF70093.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 624
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 204/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 198 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 257
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 258 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 317
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 318 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 375
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 376 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 435
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 436 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 484
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 485 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 544
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K ++ + + K ++K F +I IH++ + F
Sbjct: 545 KDPTEWSSSKEVTTFFKNIVKDKISTKAGFKSFEKIAHIHILSKEF 590
>gi|421123940|ref|ZP_15584210.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421134660|ref|ZP_15594793.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410021244|gb|EKO88036.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410438427|gb|EKP87513.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 645
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 204/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 219 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 279 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 339 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 396
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 397 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 456
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 457 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 505
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 506 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 565
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K I+ + + K ++K F +I +H++ + F
Sbjct: 566 KDPTEWSSSKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|421121176|ref|ZP_15581475.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410346004|gb|EKO97048.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
Length = 624
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 204/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 198 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 257
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 258 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 317
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 318 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 375
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 376 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 435
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 436 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 484
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 485 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 544
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K I+ + + K ++K F +I +H++ + F
Sbjct: 545 KDPTEWSSSKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|24214877|ref|NP_712358.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|386074235|ref|YP_005988552.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|24195898|gb|AAN49376.1|AE011388_7 long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|353458024|gb|AER02569.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 645
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 204/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 219 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 279 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 339 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 396
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 397 TGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 456
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 457 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 505
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 506 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 565
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K ++ + + K ++K F +I +H++ + F
Sbjct: 566 KDPTEWSSSKEVTTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|398334162|ref|ZP_10518867.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 645
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 206/409 (50%), Gaps = 26/409 (6%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I L + VP D+ + LPPWH+ ER + + G + ++V + D+Q+ +P
Sbjct: 219 IHQLQEFVPGSCNDRTIVFLPPWHIAERLLETTLIAWGASMACSSVPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + + R+ + +R++ T + T + P+
Sbjct: 279 LVSVPRLWEGLYKRIHDTVRKAPPLRQQLFHFAVRMAAITTGLQDTIRDSYATTETENPN 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
V +D A ++ L+P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 339 QKV--LDRFVASVLLLSLYPVKILSYKILQRVRDLFGGKMRFALCGAGAMPSHIQFFFRS 396
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V + V G KG+
Sbjct: 397 AGIPIIETYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGRIVSLPGEKGVAW 456
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 457 HKGPHVTVGYYKEPEKTAKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 505
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP----DKEEVLMAAKRLS 415
IVLS GEN+EP +E S I Q++V+GQD++ G +IVP +EE K+
Sbjct: 506 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDRKNLGVLIVPFFDRVQEEFSAQGKK-- 563
Query: 416 IVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
+ D SE + K +S+ + + K +++ F +I +H++ + F
Sbjct: 564 -IPKDPSEWNSSKEVSVFFKNIVKDKISTRAGFKSFEKIAHVHILPKEF 611
>gi|418710926|ref|ZP_13271692.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418726527|ref|ZP_13285138.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421085633|ref|ZP_15546484.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421102363|ref|ZP_15562967.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|409960437|gb|EKO24191.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410367477|gb|EKP22861.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431198|gb|EKP75558.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|410768526|gb|EKR43773.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
Length = 624
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 204/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 198 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 257
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 258 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 317
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 318 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 375
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 376 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 435
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 436 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 484
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 485 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 544
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K ++ + + K ++K F +I +H++ + F
Sbjct: 545 KDPTEWSSSKEVTTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|45657613|ref|YP_001699.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600853|gb|AAS70336.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 645
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 204/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 219 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 279 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 339 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 396
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 397 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 456
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 457 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 505
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 506 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 565
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K ++ + + K ++K F +I +H++ + F
Sbjct: 566 KDPTEWSSSKEVTTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|418717905|ref|ZP_13277444.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|410786778|gb|EKR80516.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
Length = 624
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 204/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 198 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 257
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 258 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 317
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 318 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 375
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+++ YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 376 AGIRIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 435
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 436 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 484
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 485 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 544
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K I + + K ++K F +I +H++ + F
Sbjct: 545 KDPTEWSSSKEIITFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|418692332|ref|ZP_13253410.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|400357565|gb|EJP13685.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
Length = 624
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 203/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 198 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 257
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 258 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 317
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G +P HI F+ +
Sbjct: 318 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGVMPSHIQFFFRS 375
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 376 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 435
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 436 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 484
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 485 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 544
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K ++ + + K ++K F +I +H++ + F
Sbjct: 545 KDPTEWSSSKEVTTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|418703539|ref|ZP_13264423.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|421116782|ref|ZP_15577157.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410011592|gb|EKO69708.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410766675|gb|EKR37358.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
Length = 624
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 203/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 198 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 257
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 258 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 317
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 318 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 375
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 376 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 435
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 436 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 484
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 485 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 544
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K I + + K ++K F +I +H++ + F
Sbjct: 545 KDPTEWSSSKEIITFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|418701054|ref|ZP_13261989.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410759952|gb|EKR26154.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 624
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 204/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 198 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 257
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 258 LVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 317
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 318 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 375
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 376 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 435
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 436 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 484
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQD++ G +IVP + V + ++ +
Sbjct: 485 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDRKNLGVLIVPFFDRVQEEFQNQAVKIP 544
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K I+ + + K ++K F +I +H++ + F
Sbjct: 545 KDPTEWSSSKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|417768534|ref|ZP_12416462.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418681218|ref|ZP_13242451.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400327039|gb|EJO79295.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409949507|gb|EKN99483.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|455669067|gb|EMF34235.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 624
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 203/406 (50%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + +P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 198 IHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 257
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + SS ++ + ++++ T+ + T + P+
Sbjct: 258 LVSVPRLWEGLYKRIYDTVRKSSHFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPN 317
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + L P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 318 Q--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRS 375
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 376 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 435
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 436 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 484
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 485 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIP 544
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E S K I + + K ++K F +I +H++ + F
Sbjct: 545 KDPTEWSSSKEIITFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|398346067|ref|ZP_10530770.1| long-chain-fatty-acid--CoA ligase [Leptospira broomii str. 5399]
Length = 644
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 180/343 (52%), Gaps = 17/343 (4%)
Query: 65 DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVP 124
D + D+ ++ LPPWH+ ER G +T++ +L DLQ +P +++SVP
Sbjct: 227 DDIQFNADDRTMAYLPPWHIAERLIETGCIRIGASEAFTSISSLGQDLQEIRPTFLLSVP 286
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
V+E+ Y+ I ++ +S R + + + + +K G L ++ S
Sbjct: 287 RVWESFYNKIHDKLREASPFGRFLFKIFQGTASTFHKYKSRLLG--LEYMLERISIFREF 344
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
A ++ A L+P +LLA + KI+ +G K +SG G+LP +ID F+ +IG+
Sbjct: 345 ARRAVALLVVAFLFPANLLA-MTAFSKIRKGLGGKLKFALSGAGALPEYIDRFFNSIGIP 403
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
+ GYG+TE V RR +G++G I EIK++D + E+ G KGI +G
Sbjct: 404 ILEGYGMTELGGVSTRRRLNSITVGTLGRCIPGVEIKLIDEQGKEIHEPGVKGIAWHKGP 463
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
VM GY+K+P T + + DGWLN+GD + W G L GRAKDTIVL
Sbjct: 464 HVMMGYYKDPEKTAEII-VDGWLNSGDLLLWT-----------VQGELKYAGRAKDTIVL 511
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
GEN+EP +E A +S LI Q +++G D++ A++VPD E
Sbjct: 512 LGGENLEPEPIEFALTQSELILQAMIVGHDKKALSALLVPDWE 554
>gi|418747259|ref|ZP_13303569.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|410792053|gb|EKR89998.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 645
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 205/410 (50%), Gaps = 28/410 (6%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I L + VP D+ + LPPWH+ ER + + G + ++V + D+Q+ +P
Sbjct: 219 IHQLQEFVPCSYEDRTIVFLPPWHIAERLLETTLIAWGASMACSSVPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR-IYEGFCLTRNQKQP 178
++SVP ++E LY I + + R+ + A + ++ T+ + I + + T +
Sbjct: 279 LVSVPRLWEGLYKRIYDTVRKAPPLRQKLFYAAVSMAKITTSLQDTIRDSYTTTETENLG 338
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
ID A + L+P+ +L+ K++ + G + + G G++P HI F+
Sbjct: 339 Q---KTIDRFVASVFLIFLYPIKILSHKILQRVRDLFGGRIRFALCGAGAMPSHIQFFFR 395
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+ G+ + YG+TE++ + A G++G P+ T IK+V + V G KG+
Sbjct: 396 SAGIPIIETYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIVTTPGQKGVA 455
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+G V GY+K P T Q L +DGWL++GDI + H+ G L GRAKD
Sbjct: 456 WHKGPHVTLGYYKEPEKTAQTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKD 504
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRL 414
TIVLS GEN+EP +E S I Q++V+GQD++ G +IVP D+ EE K++
Sbjct: 505 TIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKKI 564
Query: 415 SIVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D ++ + K +S + + K ++K F +I IHV+ + F
Sbjct: 565 P---KDPTDWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAHIHVLSKEF 611
>gi|410450615|ref|ZP_11304649.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|418752471|ref|ZP_13308732.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|422004493|ref|ZP_16351710.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|409967201|gb|EKO35037.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|410015493|gb|EKO77591.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|417256795|gb|EKT86209.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|456876738|gb|EMF91817.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 645
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 205/410 (50%), Gaps = 28/410 (6%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I L + VP D+ + LPPWH+ ER + + G + ++V + D+Q+ +P
Sbjct: 219 IHQLQEFVPCSYEDRTIVFLPPWHIAERLLETTLIAWGASMACSSVPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR-IYEGFCLTRNQKQP 178
++SVP ++E LY I + + R+ + A + ++ T+ + I + + T +
Sbjct: 279 LVSVPRLWEGLYKRIYDTVRKAPPLRQKLFYAAVSMAKITTSLQDTIRDSYTTTETENLG 338
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
ID A + L+P+ +L+ K++ + G + + G G++P HI F+
Sbjct: 339 Q---KTIDRFVASVFLIFLYPIKILSHKILQRVRDLFGGRIRFALCGAGAMPSHIQFFFR 395
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+ G+ + YG+TE++ + A G++G P+ T IK+V + V G KG+
Sbjct: 396 SAGIPIIETYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIVTTPGQKGVA 455
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+G V GY+K P T Q L +DGWL++GDI + H+ G L GRAKD
Sbjct: 456 WHKGPHVTLGYYKEPEKTAQTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKD 504
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRL 414
TIVLS GEN+EP +E S I Q++V+GQD++ G +IVP D+ EE K+
Sbjct: 505 TIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKK- 563
Query: 415 SIVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
+ D ++ + K +S + + K ++K F +I IH++ + F
Sbjct: 564 --IPKDPTDWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAHIHILSKEF 611
>gi|418688436|ref|ZP_13249592.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418739761|ref|ZP_13296142.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410737293|gb|EKQ82035.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752883|gb|EKR09855.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 645
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 204/407 (50%), Gaps = 22/407 (5%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + VP D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 219 IHQIQEFVPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + S ++ + ++I+ T + T + P+
Sbjct: 279 LVSVPRLWEGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITTNLQDTIRDSYATTKMENPN 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 238
L+D A + + P+ +L+ K++ K+++ G + + G G++P HI F+
Sbjct: 339 Q--KLLDRFVASVFLISMIPIKILSYKIL-KRVRDLFGGRIRFALCGAGAMPSHIQFFFR 395
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+ G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 396 SAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKIVTTPGEKGVA 455
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKD
Sbjct: 456 WHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKD 504
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-V 417
TIVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 505 TIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKI 564
Query: 418 HADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D E + K ++ + + K ++K F +I +H++ + F
Sbjct: 565 PKDPGEWNSSKEVATFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|398339139|ref|ZP_10523842.1| long-chain-fatty-acid--CoA ligase [Leptospira kirschneri serovar
Bim str. 1051]
gi|418676702|ref|ZP_13237980.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|421132459|ref|ZP_15592627.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|400322602|gb|EJO70458.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410356224|gb|EKP03581.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 645
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 204/407 (50%), Gaps = 22/407 (5%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + VP D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 219 IHQIQEFVPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + S ++ + ++I+ T + T + P+
Sbjct: 279 LVSVPRLWEGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITTNLQDTIRDSYATTKMENPN 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 238
L+D A + + P+ +L+ K++ K+++ G + + G G++P HI F+
Sbjct: 339 Q--KLLDRFVASVFLISMIPIKILSYKIL-KRVRDLFGGRIRFALCGAGAMPSHIQFFFR 395
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+ G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 396 SAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKIVTTPGEKGVA 455
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKD
Sbjct: 456 WHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKD 504
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-V 417
TIVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 505 TIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKI 564
Query: 418 HADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D E + K ++ + + K ++K F +I +H++ + F
Sbjct: 565 PKDPGEWNSSKEVATFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|418719367|ref|ZP_13278567.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418738800|ref|ZP_13295193.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410744520|gb|EKQ93261.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410745498|gb|EKQ98408.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
Length = 645
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 201/409 (49%), Gaps = 26/409 (6%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I L + VP D+ + LPPWH+ ER + + G + +++ + D+QR +P
Sbjct: 219 IHQLQEFVPCSCNDRTIIFLPPWHIAERLLETALIAWGASMACSSIPTIPADMQRVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + + R+ + +R++ T+ + T + P
Sbjct: 279 LVSVPRLWEGLYKRIHDTVRKAPPLRQKLFHIAVRMAEITTSLQDTIRDSYTTIEIENPR 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
ID A L+P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 339 Q--KTIDRFVASAFLLFLYPIKILSYKILQRVRDLFGGRIRFALCGAGAMPPHIQFFFRS 396
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V + G KGI
Sbjct: 397 AGIPIIETYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIATAPGEKGIAW 456
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T + L +DGWL++GDI + H+ G L GRAKDT
Sbjct: 457 HKGPHVTVGYYKEPEKTAKTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 505
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLS 415
IVLS GEN+EP +E S I Q++V+GQD++ G +IVP D+ EE K+L
Sbjct: 506 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKKLP 565
Query: 416 IVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E + K +S + + K ++K F +I IH++ + F
Sbjct: 566 ---KDPTEWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAHIHILPKEF 611
>gi|359686030|ref|ZP_09256031.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
Length = 645
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 205/410 (50%), Gaps = 28/410 (6%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I L + VP D+ + LPPWH+ ER + + G + ++V + D+Q+ +P
Sbjct: 219 IHQLQEFVPCSYEDRTIVFLPPWHIAERLLETTLIAWGASMACSSVPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR-IYEGFCLTRNQKQP 178
++SVP ++E LY I + + R+ + A + ++ T+ + I + + T +
Sbjct: 279 LVSVPRLWEGLYKRIYDTVRKAPPLRQKLFYAAVSMAKITTSLQDTIRDSYTTTETENLG 338
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
ID A + L+P+ +L+ K++ + G + + G G++P HI F+
Sbjct: 339 Q---KTIDRFVASVFLIFLYPIKILSHKILQRVRDLFGGRIRFALCGAGAMPSHIQFFFR 395
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+ G+ + YG+TE++ + A G++G P+ T IK+V + V G KG+
Sbjct: 396 SAGIPIIETYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIVTIPGQKGVA 455
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+G V GY+K P T Q L +DGWL++GDI + H+ G L GRAKD
Sbjct: 456 WHKGPHVTLGYYKEPEKTAQTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKD 504
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRL 414
TIVLS GEN+EP +E S I Q++V+GQD++ G +IVP D+ EE K+
Sbjct: 505 TIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKK- 563
Query: 415 SIVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
+ D ++ + K +S + + K ++K F +I IH++ + F
Sbjct: 564 --IPKDPTDWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAHIHILSKEF 611
>gi|421090896|ref|ZP_15551686.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410000482|gb|EKO51112.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
Length = 645
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 204/407 (50%), Gaps = 22/407 (5%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + VP D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 219 IHQIQEFVPGSYNDRTILSLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + S ++ + ++I+ T + T + P+
Sbjct: 279 LVSVPRLWEGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITTNLQDTIRDSYATTKMENPN 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 238
L+D A + + P+ +L+ K++ K+++ G + + G G++P HI F+
Sbjct: 339 Q--KLLDRFVASVFLISMIPIKILSYKIL-KRVRDLFGGRIRFALCGAGAMPSHIQFFFR 395
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+ G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 396 SAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKIVTTPGEKGVA 455
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKD
Sbjct: 456 WHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKD 504
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-V 417
TIVLS GEN+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ +
Sbjct: 505 TIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKI 564
Query: 418 HADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D E + K ++ + + K ++K F +I +H++ + F
Sbjct: 565 PKDPGEWNSSKEVATFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|417780670|ref|ZP_12428431.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410779379|gb|EKR63996.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 645
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 195/394 (49%), Gaps = 22/394 (5%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I L + VP D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 219 IHQLQEFVPCSCNDRTIIFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + + R+ + +R++ T+ + T + P
Sbjct: 279 LVSVPRLWEGLYKRIHDTVRKAPPLRQKLFHVAVRMAELTTSLQDTIRDSYATTEIENPR 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
ID A L+P+ +L+ K++ K G + + G G++P HI F+ +
Sbjct: 339 Q--KTIDRFVASAFLLFLYPIKILSYKILQKVRDLFGGRIRFALCGAGAMPPHIQFFFRS 396
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A ++G P+ T IK+V + V G KGI
Sbjct: 397 AGIPIIETYGMTETTGIGAIGEFPLPKNDAIGAPLPGTAIKLVGEDGKIVTAPGEKGIAW 456
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 457 HKGPHVTVGYYKEPEKTAKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 505
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLS 415
IVLS GEN+EP +E S I Q++V+GQD++ G +IVP D+ EE K+L
Sbjct: 506 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKKLP 565
Query: 416 IVHADASELSKEKTISLLYGEL--RKWTSKCSFQ 447
D +E + K +S + + K ++K F+
Sbjct: 566 ---KDPTEWNSSKEVSSFFKNIVKDKISTKAGFK 596
>gi|421110232|ref|ZP_15570733.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410804417|gb|EKS10534.1| AMP-binding enzyme [Leptospira santarosai str. JET]
Length = 645
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 205/410 (50%), Gaps = 28/410 (6%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I L + VP D+ + LPPWH+ ER + + G + ++V + D+Q+ +P
Sbjct: 219 IHQLQEFVPCSYEDRTIVFLPPWHIAERLLETTLIAWGASMACSSVPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR-IYEGFCLTRNQKQP 178
++SVP ++E LY I + + R+ + A + ++ T+ + I + + T +
Sbjct: 279 LVSVPRLWEGLYKRIYDTVRKAPPLRQKLFYAAVSMAKITTSLQDTIRDSYTTTETENLG 338
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
ID A + L+P+ +L+ K++ + G + + G G++P HI F+
Sbjct: 339 Q---KTIDRFVASVFLIFLYPIKILSHKILQRVRDLFGGRIRFALCGAGAMPSHIQFFFR 395
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+ G+ + YG+TE++ + A G++G P+ T IK+V + V G KG+
Sbjct: 396 SAGIPIIETYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIVTIPGQKGVA 455
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+G + GY+K P T Q L +DGWL++GDI + H+ G L GRAKD
Sbjct: 456 WHKGPHITLGYYKEPEKTAQTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKD 504
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRL 414
TIVLS GEN+EP +E S I Q++V+GQD++ G +IVP D+ EE K+
Sbjct: 505 TIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKK- 563
Query: 415 SIVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
+ D ++ + K +S + + K ++K F +I IH++ + F
Sbjct: 564 --IPKDPTDWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAHIHILSKEF 611
>gi|410940968|ref|ZP_11372767.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410783527|gb|EKR72519.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 645
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 204/409 (49%), Gaps = 26/409 (6%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + VP D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 219 IHQIQEFVPGSYNDRTILFLPPWHIAERLLETALIAWGASMACSSIPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + S ++ + ++++ T + T ++P+
Sbjct: 279 LVSVPRLWEGLYKRIHDTVRKSPPLKQKLFHFAVKMAEIITNLQDTIRDSYATTETEKPN 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A I + P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 339 Q--KLLDRFIAGIFLLSMLPIKILSYKILERVRDLFGGRIRFALCGAGAMPSHIQFFFRS 396
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V + V G KG+
Sbjct: 397 AGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGEDGKIVTTPGEKGVAW 456
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 457 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 505
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP----DKEEVLMAAKRLS 415
IVLS GEN+EP +E S I Q++V+GQD++ G +IVP +EE + K++
Sbjct: 506 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDRKNLGVLIVPFFDRVQEEFQIQGKKIP 565
Query: 416 IVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D E + K ++ + + K ++K F +I +H++ + F
Sbjct: 566 ---KDPIEWNSSKEVATFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|421094230|ref|ZP_15554950.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410362956|gb|EKP13989.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|456887901|gb|EMF98914.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200701203]
Length = 645
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 201/409 (49%), Gaps = 26/409 (6%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I L + VP D+ + LPPWH+ ER + + G + +++ + D+QR +P
Sbjct: 219 IHQLQEFVPCSCNDRTIIFLPPWHIAERLLETALIAWGASMACSSIPTIPADMQRVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + + R+ + +R++ T+ + T + P
Sbjct: 279 LVSVPRLWEGLYKRIHDTVRKAPPLRQKLFHIAVRMAEITTSLQDTIRDSYTTIEIENPR 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
ID A L+P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 339 Q--KTIDRFVASAFLLFLYPIKILSYKILQRVRDLFGGRIRFALCGAGAMPPHIQFFFRS 396
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V + G KGI
Sbjct: 397 AGIPIIETYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIATAPGEKGIAW 456
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T + L +DGWL++GDI + H+ G L GRAKDT
Sbjct: 457 HKGPHVTVGYYKEPEKTAKTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 505
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLS 415
IVLS GEN+EP +E S I Q++V+GQD++ G +IVP D+ EE K+L
Sbjct: 506 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKKLP 565
Query: 416 IVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E + K ++ + + K ++K F +I IH++ + F
Sbjct: 566 ---KDPTEWNSSKEVNSFFKNIVKDKISTKAGFKSFEKIAHIHLLPKEF 611
>gi|421097581|ref|ZP_15558266.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410799408|gb|EKS01483.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 645
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 203/409 (49%), Gaps = 26/409 (6%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I L + VP D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 219 IHQLQEFVPCSCNDRTIIFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + + ++ + +R++ T+ + T + P
Sbjct: 279 LVSVPRLWEGLYKRIHDTVRKAPPLKQKLFHVAVRMAEITTSLQDTIRDSYTTIEIENPR 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
ID A L+P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 339 Q--KTIDRFVASAFLLFLYPIKILSYKILQRVKDLFGGRIRFALCGAGAMPPHIQFFFRS 396
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V + V G KGI
Sbjct: 397 AGIPIIETYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGRIVTAPGEKGIAW 456
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 457 HKGPHVTVGYYKEPEKTAKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 505
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLS 415
IVLS GEN+EP +E S I Q++V+GQD++ G +IVP D+ EE K+L
Sbjct: 506 IVLSGGENLEPAPIEAKLTESEFISQVIVVGQDKKNLGVLIVPFFDRVYEEFQSKEKKLP 565
Query: 416 IVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
D +E + K +S + + K ++K F +I I+++ + F
Sbjct: 566 ---KDPTEWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAHIYILPKEF 611
>gi|421107360|ref|ZP_15567912.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|410007376|gb|EKO61086.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 645
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 202/406 (49%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + VP D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 219 IHQIQEFVPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + S ++ + ++I+ T + T + P+
Sbjct: 279 LVSVPRLWEGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITTNLQDTIRDSYATTKTENPN 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + + P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 339 Q--KLLDRFVASVFLISMIPIKILSYKILERVRDLFGGRIRFALCGAGAMPSHIQFFFRS 396
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 397 AGIHIIETYGMTETTGIGAVGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 456
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 457 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 505
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQD++ G +IVP + V + ++ +
Sbjct: 506 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDRKNLGVLIVPFFDRVQEEFQNQAVKIP 565
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
+ ++ + K I+ + + K ++K F +I +H++ + F
Sbjct: 566 KEPTKWNSSKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|418696266|ref|ZP_13257275.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|409955795|gb|EKO14727.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
Length = 645
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 202/406 (49%), Gaps = 20/406 (4%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + + VP D+ + LPPWH+ ER + + G + +++ + D+Q+ +P
Sbjct: 219 IHQIQEFVPGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTV 278
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++SVP ++E LY I + S ++ + ++I+ T + T + P+
Sbjct: 279 LVSVPRLWEGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITTNLQDTIRDSYATTKTENPN 338
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
L+D A + + P+ +L+ K++ + G + + G G++P HI F+ +
Sbjct: 339 Q--KLLDRFVASVFLISMIPIKILSYKILERVRDLFGGRIRFALCGAGAMPSHIQFFFRS 396
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
G+ + YG+TE++ + A G++G P+ T IK+V V G KG+
Sbjct: 397 AGIHIIETYGMTETTGIGAVGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAW 456
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDT
Sbjct: 457 HKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDT 505
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VH 418
IVLS GEN+EP +E S I Q++V+GQD++ G +IVP + V + ++ +
Sbjct: 506 IVLSGGENLEPAPIEAKLTESEFINQVIVVGQDRKNLGVLIVPFFDRVQEEFQNQAVKIP 565
Query: 419 ADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 458
+ ++ + K I+ + + K ++K F +I +H++ + F
Sbjct: 566 KEPTKWNSSKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|397689178|ref|YP_006526432.1| Long-chain acyl-CoA synthetase [Melioribacter roseus P3M]
gi|395810670|gb|AFN73419.1| Long-chain acyl-CoA synthetase [Melioribacter roseus P3M]
Length = 607
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 197/409 (48%), Gaps = 52/409 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
I++ ++I + D FLS LP H++ER GY+ FS G + Y ++ + ++ +
Sbjct: 213 NIKAAHEIFDIDETDTFLSFLPLCHIFERMAGYYTAFSCGGTIAYAESIEKIASNMLEIR 272
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M +VP ++E +Y+ I++ I + S ++ + I Y L R
Sbjct: 273 PTIMTAVPRLFERMYTKIKRNIESQSEKKQKIFNWAIETGKEYQ----------LARKSG 322
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
QP I L H LA+KLV K++ G + +SGG +L + +
Sbjct: 323 QP--------------IPVSLTLKHKLADKLVLSKLRERTGGRMRFFISGGAALARELGI 368
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+EA G+ + GYGLTESSPVIAA R G+VG P+ E+KI A+ E+L
Sbjct: 369 FFEAAGILIIEGYGLTESSPVIAANRLNDYKFGTVGKPMPGVEVKI--AKDGEIL----- 421
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G +MQGY+KN T++ + +DGWL+TGDIG G L++ R
Sbjct: 422 ----AHGPNIMQGYYKNKKETEETI-KDGWLHTGDIGVFDAE----------GFLIITDR 466
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K S G+ V P +E L S I Q V+IG + A+IVPD E + A
Sbjct: 467 KKHLFKTSQGKYVAPTPIESMFLASKYIEQFVIIGDRRMFITALIVPDFEALKEYADANR 526
Query: 416 IVHADASELSKEKTI-SLLYGELRKWTSKCSF--QIGPIHVVDEPFTVN 461
I + D EL K K I LL EL ++ K S ++ ++D+PFT+
Sbjct: 527 IQYKDEKELVKMKQIYELLDKELEQFQKKLSSFEKVRKFTLLDKPFTIE 575
>gi|418684399|ref|ZP_13245584.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418740695|ref|ZP_13297072.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410741098|gb|EKQ85811.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752072|gb|EKR09048.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 553
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 187/383 (48%), Gaps = 71/383 (18%)
Query: 38 LFSFVLIDLNTWMP--IPKMTNFQIRSLYDIVPA-----ENGDKFLSMLPPWHVYERACG 90
LF+ + T MP + M + I + +VP + D LS+LP WH++ER
Sbjct: 180 LFTLIYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLLTDIKPTDSMLSILPIWHIFERVNE 239
Query: 91 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSAARRV 147
Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ + RR+
Sbjct: 240 YGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPTIRRI 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA--- 204
+ + S Y A +R G L + + + L +L+ + + II + P L A
Sbjct: 300 LFKLAYFFSKHYNASRRFLNG--LEVDYENRNILKSLVIGIKSLIILLLTGPFTLSAISI 357
Query: 205 ---------------------------------EKLVYKKIQSAIGIS-KAGVSGGGSLP 230
+ +V KI++A G KA +SGGG+L
Sbjct: 358 LAYLTIPVYGAHLPNWIFFSLAGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQ 417
Query: 231 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN--- 287
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 418 SHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLT 477
Query: 288 ------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 339
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 478 HINDQFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----- 531
Query: 340 RGRSRRCGGVLVLEGRAKDTIVL 362
L L GRAKDT+VL
Sbjct: 532 -----NFKKTLTLTGRAKDTVVL 549
>gi|322368270|ref|ZP_08042839.1| AMP-dependent synthetase and ligase [Haladaptatus paucihalophilus
DX253]
gi|320552286|gb|EFW93931.1| AMP-dependent synthetase and ligase [Haladaptatus paucihalophilus
DX253]
Length = 653
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 182/363 (50%), Gaps = 45/363 (12%)
Query: 74 KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
K +S LP HV+ER G+F+ F+ G + Y + L+DD + +P SVP VYE +Y
Sbjct: 267 KTVSFLPLAHVFERTAGHFMMFAAGATVAYAESPDTLQDDFRAVRPTTGTSVPRVYERIY 326
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
I+ Q S RR+ A + AY G R QK
Sbjct: 327 DAIRSQADESDLKRRIFEWA-TDVGKAYHEVDSPGVGL---RAQK--------------- 367
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
LLA+KLV+ +++ +G + + +SGGGSL + Y +G+ + GYGL
Sbjct: 368 ----------LLADKLVFDQVKDGLGGNIEFFISGGGSLSADLCALYHGMGLPILEGYGL 417
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQG 308
TE+SPVI+ P +G++G+P+ ++K+ D+ E AG G + V+G V G
Sbjct: 418 TETSPVISVNPPEAPEIGTIGYPVVDEKVKVDDSVVGEQFSDAAGEVGELLVKGPNVTDG 477
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+ P T+QA EDGW TGDI I P G + RAK+ +VLSTG+NV
Sbjct: 478 YWNKPEETEQAFTEDGWFRTGDIVEIRPD----------GYIAFRERAKELLVLSTGKNV 527
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKE 427
P +E+A S ++ Q +V+G ++ A+IVP+ EEV A R + + D EL ++
Sbjct: 528 APGPIEDAFAASDIVEQCLVMGDGRKFVSALIVPNVEEVRERAAREGLSLPDDDRELCRD 587
Query: 428 KTI 430
T+
Sbjct: 588 DTV 590
>gi|374850349|dbj|BAL53340.1| long-chain acyl-CoA synthetase [uncultured Bacteroidetes bacterium]
Length = 611
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 205/412 (49%), Gaps = 56/412 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF--IFSRGIELMYTAVRNLKDDLQRYQ 116
+ + ++ + D FLS LP H YER G++ S G ++ ++ +L+ +
Sbjct: 213 NVEAARSVIAVDERDVFLSYLPMCHSYERTTGFYTAFASGGTTAFAESLETVRTNLREVR 272
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M SVP ++E + GI Q+ S RR + + I G R Q+
Sbjct: 273 PTIMTSVPQLFERIRGGIYAQMAQQSPLRRSIFEWAVTI------------GLRRLREQE 320
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ RI A + + LAE+ V++KIQ A+G + VSGGG L I
Sbjct: 321 EQ-----------GRISAATAFG-YRLAERFVFRKIQLAVGGRLRFFVSGGGPLAPEIGR 368
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ AIG+ + GYGLTE+SPV+ R N G+VG P+ EI+I D+
Sbjct: 369 FFWAIGLPILEGYGLTEASPVLTVNRLDDNEFGTVGKPLPGVEIRIDDS----------- 417
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEG 354
G + RG +M+GY++NP T+ A+D DGWL+TGD+G W S+R G L++
Sbjct: 418 GEILARGPNIMRGYWQNPEETRAAIDADGWLHTGDVGRW---------SQR--GNLMITD 466
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R K+ IV S G+NV P +E A + ++ Q+VVIG + A+IVP+ EE L A R
Sbjct: 467 RIKNLIVTSGGKNVAPQVVERALKQWEVVAQVVVIGDGRPFCTALIVPN-EEALRAFLRA 525
Query: 415 SIVHADA--SELSKE-KTISLLYGELRKWTSKCS--FQIGPIHVVDEPFTVN 461
+ A A SEL + + + + EL + + ++ I +V EPFTV
Sbjct: 526 QGIDASAQLSELCTDLRVLGAVMRELEHYQRDLAKYERVRRIAMVAEPFTVE 577
>gi|333370495|ref|ZP_08462494.1| long-chain-fatty-acid-CoA ligase [Desmospora sp. 8437]
gi|332977723|gb|EGK14486.1| long-chain-fatty-acid-CoA ligase [Desmospora sp. 8437]
Length = 611
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 197/384 (51%), Gaps = 45/384 (11%)
Query: 63 LYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYM 120
+ ++VP GD LS LP HV+ER G F+ G + Y ++ ++++L +P M
Sbjct: 210 IVELVP---GDVCLSYLPLSHVFERMAGQFVPLREGATIAYAESIDTIQENLLEVRPTVM 266
Query: 121 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 180
+VP + E +Y+ +Q+QI ++S +R + ++A R YEGF R
Sbjct: 267 TTVPRLLEKIYAKVQEQIASASPLKRKI------FNWAVDVGHRRYEGFIDAR------- 313
Query: 181 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEA 239
+ L+ L I + L LA++LV++KI+ +G G VSG L I F+ +
Sbjct: 314 -MDLL--LKGEAIPSDLRRQFALADRLVFRKIKERVGGRLRGLVSGAAPLNQEIARFFWS 370
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
I + V GYGLTE+SPVIAA + +G+VG P+ + E+KI G+ G +
Sbjct: 371 IDIPVLEGYGLTEASPVIAANPMMRSKIGTVGKPLPNLEVKI-----------GTDGEIL 419
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
RG +MQGY+KN AT++AL DGWL+TGD+G P G L + R K+
Sbjct: 420 ARGPSIMQGYYKNEEATREAL-RDGWLHTGDLGEWDPD----------GFLRVVDRKKNL 468
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
IVLSTG+NV P +E S I Q V+IG ++ A++VPD E +L A +
Sbjct: 469 IVLSTGKNVAPQPVENHITNSPYISQAVLIGNGRKYVIALVVPDYENLLPWAGKRGFPEQ 528
Query: 420 DASELSKEKTI-SLLYGELRKWTS 442
D L++ + L E+ K T
Sbjct: 529 DPENLAEHPEVKKFLKEEVEKHTE 552
>gi|183219534|ref|YP_001837530.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909676|ref|YP_001961231.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774352|gb|ABZ92653.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777956|gb|ABZ96254.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 641
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 134/409 (32%), Positives = 195/409 (47%), Gaps = 33/409 (8%)
Query: 67 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 126
V GD L LPPWH ER F GI++ +T+V L DL + +P + +VP V
Sbjct: 224 VKVGEGDVTLGFLPPWHSGERIFETICFYSGIKIAFTSVPELGKDLAKAKPTILFTVPRV 283
Query: 127 YETLYSGIQKQIFTSSAARRVVARALI--RISFAYT---AFKRIYEGFCLTRNQKQPSYL 181
+E+ Y I+ I S ++ + L+ + F+ T AF RI P
Sbjct: 284 WESFYDKIKDTIQKSHWIKKYFLKLLVWNSVQFSITYDKAFDRIPRLIT-------PKTF 336
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
I ++ I I PL L K V KI S +G + +G G+L +D F AI
Sbjct: 337 SLYILQIFNCIKLMIYLPL-LPISKFVLSKILSVLGGRLRYAFAGAGALQAEVDRFMYAI 395
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
G+ + YG+TE+S V R +G+VG PI IK++D E+ G KG+
Sbjct: 396 GMPILEVYGMTENSGVSTIRHYNDFSVGNVGKPIQGVTIKLIDEFGKEIRKPGIKGVALH 455
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
G M+GY+ TK L +D WLN+GD + W G L GRAKDT
Sbjct: 456 HGRHNMKGYYLEEEKTKAVLTDDRWLNSGDLLVWTTQ-----------GNLKFAGRAKDT 504
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
IVLS GENVEP +E +S I Q VV+GQD++ A+I+ + E+V K SI
Sbjct: 505 IVLSGGENVEPEPIEICLKQSDYIDQAVVVGQDKKTLSALIILNLEKVETYLKEQSINMN 564
Query: 420 DASELSKEKTI--SLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTVN 461
+ + +E I L+ E++ + S K F+ I ++++ PF V+
Sbjct: 565 LKNSIYQEVEIIQKLIRNEVKHFVSDKNGFKSFERISNVYILQNPFVVH 613
>gi|408792990|ref|ZP_11204600.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408464400|gb|EKJ88125.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 641
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 198/408 (48%), Gaps = 31/408 (7%)
Query: 67 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 126
V GD L LPPWH ER F GI++ +T+V L DL + +P + +VP V
Sbjct: 224 VQVGEGDVTLGFLPPWHSGERIFETICFYSGIKIAFTSVPELGKDLAKTKPTILFTVPRV 283
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYT-----AFKRIYEGFCLTRNQKQPSYL 181
+E+ Y I+ I S ++ + L+ S ++ AF RI R + ++L
Sbjct: 284 WESFYDKIKDTIHKSGLFKKYFLKILVWNSMNFSLCYDKAFDRI------PRLNESKTFL 337
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
L ++ I I PL L KLV KI S +G + +G G+L +D F AI
Sbjct: 338 QVL-SQIFHLIKLIIYLPL-LPISKLVLSKILSVLGGRLRYAFAGAGALQAEVDRFMYAI 395
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
G+ + YG+TE+S V R +G+VG PI+ IK+++ E+ G KG+
Sbjct: 396 GMPILEVYGMTENSGVSTIRHYNDFSVGNVGKPIHGVTIKLINEFGKEITKPGIKGVAHH 455
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 360
G M+GY+ TK L D WLN+GD+ G L GRAKDTI
Sbjct: 456 HGFHNMKGYYLEEEKTKAVLTADRWLNSGDLLVYTAQ----------GNLKFAGRAKDTI 505
Query: 361 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV--PDKEEVLMAAKRLSIVH 418
VLS GENVEP +E +S I Q VV+GQD++ A+I+ DK + + + +S+
Sbjct: 506 VLSGGENVEPEPIEICLKQSEFIDQAVVVGQDKKSLSALILLNLDKVQSYLNLQSISLDL 565
Query: 419 ADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTVN 461
+ +E + L+ E++++ S K F+ I I ++ PF ++
Sbjct: 566 NNCIFNEEETILKLIKEEVKRFVSDKNGFKSFERITNIFILQNPFVIH 613
>gi|357462835|ref|XP_003601699.1| 4-coumarate-CoA ligase [Medicago truncatula]
gi|355490747|gb|AES71950.1| 4-coumarate-CoA ligase [Medicago truncatula]
Length = 346
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 89/99 (89%)
Query: 266 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 325
V+GSVGHP+ HTE K+VD+ET EVLP G KGI+KVRG Q+M+GY+KNPSAT QA+D+DGW
Sbjct: 39 VIGSVGHPLKHTEFKVVDSETGEVLPPGYKGILKVRGPQLMKGYYKNPSATNQAIDKDGW 98
Query: 326 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
LNTGDIGWIA +HS GRSR CGGV+V+EGRAKDTIVLS+
Sbjct: 99 LNTGDIGWIAAYHSSGRSRNCGGVIVVEGRAKDTIVLSS 137
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 86/102 (84%), Gaps = 1/102 (0%)
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
+ + GENVEP+ELEEAA+RSSLI+QIVVIGQD+RR GA++VP+KE VL AA+ LSI+ +
Sbjct: 218 VSIREGENVEPVELEEAAMRSSLIQQIVVIGQDKRRLGAVVVPNKE-VLKAARELSIIDS 276
Query: 420 DASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
++S+LS+E SL+Y ELR WTS+ FQIGPI +V++PFT++
Sbjct: 277 NSSDLSQENVTSLIYNELRTWTSEFPFQIGPILLVNDPFTID 318
>gi|359689869|ref|ZP_09259870.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418748860|ref|ZP_13305152.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418757738|ref|ZP_13313925.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384115515|gb|EIE01773.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404275929|gb|EJZ43243.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 642
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 167/348 (47%), Gaps = 17/348 (4%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 117
+ I L VPA D+ + LPPWH+ ER + S G L + V L D + +P
Sbjct: 218 WTINQLQQFVPANYSDRVVVFLPPWHIAERILETALLSWGASLACSNVSQLTRDFEIIKP 277
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA-FKRIYEGFCLTRNQK 176
++SVP V+E LY I ++ SS + + + +RI+ Y + + + T N
Sbjct: 278 TVLVSVPRVWEALYRRIWDKVSKSSPTKLAIFKTAVRIAETYNSLLDTVIGNYSETENSN 337
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLF 236
+ L D + + ++ + + L++LA+K++ G K G G++P I F
Sbjct: 338 KEE---KLTDTVVSVLLLPLFYFLNILAQKVLAPVRALFGGQLKFAFCGAGAMPPKIQFF 394
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+ ++GV + YG+TE++ + A GS+G IK+V + V G KG
Sbjct: 395 FRSMGVPIIETYGMTETTGMGALGSFPIPKTGSIGQVFPGAHIKLVGEQNEVVSKPGDKG 454
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGR 355
I +G V GY+KN T+ DGW N+GD+ W G L GR
Sbjct: 455 IAWHKGPHVTAGYYKNEELTRSNF-VDGWFNSGDLFVWTKT-----------GELKFAGR 502
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
AKDTIVLS+GENVEP +E L + +VIGQDQ+ +IVPD
Sbjct: 503 AKDTIVLSSGENVEPEPIEGKILETGWALTAIVIGQDQKFLAVLIVPD 550
>gi|119512747|ref|ZP_01631818.1| AMP-dependent synthetase and ligase [Nodularia spumigena CCY9414]
gi|119462615|gb|EAW43581.1| AMP-dependent synthetase and ligase [Nodularia spumigena CCY9414]
Length = 237
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 126/219 (57%), Gaps = 19/219 (8%)
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
VGYGLTE++ + RRP N+ GS G PI TEI IVD +T + LP G KG+V RG Q+
Sbjct: 3 VGYGLTETAAALTTRRPEHNLRGSAGIPIPGTEIWIVDPKTRKTLPQGEKGLVLARGPQI 62
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
MQGY+ NP AT +A++ GW NT D+G++ LVL GR KDTIVLS G
Sbjct: 63 MQGYYHNPEATNKAINPKGWFNTEDLGFLTAQQD----------LVLTGREKDTIVLSNG 112
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 425
ENVEP +E A LRS I QIVV+GQD+R GA+IVP+ + + A+ + L
Sbjct: 113 ENVEPEPIENACLRSDYIDQIVVVGQDRRSLGALIVPNWDNLEEWAENQGL----QLNLD 168
Query: 426 KEKTISLLYGELRKWTSK-----CSFQIGPIHVVDEPFT 459
+ +L EL + + +I P ++ EPF+
Sbjct: 169 SQPVQNLFRQELDREVRNRPGYSSNDRIVPFRLISEPFS 207
>gi|325982123|ref|YP_004294525.1| long-chain-fatty-acid--CoA ligase [Nitrosomonas sp. AL212]
gi|325531642|gb|ADZ26363.1| Long-chain-fatty-acid--CoA ligase [Nitrosomonas sp. AL212]
Length = 618
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 199/408 (48%), Gaps = 59/408 (14%)
Query: 62 SLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHY 119
S +VP D LS LP H +ER GY++ G + Y ++ L++DL +P
Sbjct: 230 SCLQVVPVLPEDVLLSFLPLSHTFERTAGYYVPMMTGATIAYARSIPQLQEDLLIIRPTI 289
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIR--ISFAYTAFKRIYEGFCLTRNQKQ 177
MISVP +YE +Y+GIQ ++ AR L + Y+ F+ C Q+
Sbjct: 290 MISVPRIYERVYAGIQAKLAEGPG----FARWLFNFAVDVGYSRFE------C----QQG 335
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 236
Y R + ++WPL +K V K+ +G + +SGG +L +
Sbjct: 336 RGY----------RRLSHVVWPL---LKKWVADKVMGKLGGRLRMVMSGGAALSPQVSRV 382
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+ +G+ + GYG+TESSPV+ A R NV SVG PI E+K+ E+N +L
Sbjct: 383 FIGLGLPILQGYGMTESSPVVCANRLEDNVPASVGLPIPGVEVKL--GESNALL------ 434
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+RG VM GY+ NP AT+ + DGWLN+GDI I G + + GR
Sbjct: 435 ---IRGPNVMLGYWNNPEATQAVISSDGWLNSGDIASIDAQ----------GHVTITGRL 481
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV--PDKEEVLMAAKRL 414
K+ IVLSTGE V P ++E A LR L Q+++IG+ + ++V P + + MA L
Sbjct: 482 KEIIVLSTGEKVPPADMEAAILRDPLFEQVMLIGESRSYLSVLVVLNPARRQDFMAHYGL 541
Query: 415 SIVHADASELSKEKTISLLYGELRKWTSKCS--FQIGPIHVVDEPFTV 460
+E +++ +L ++ + TS+ +I + V EP++V
Sbjct: 542 G--DDLTNEQQRQQAEEILLEKITRQTSEFPGYAKIRRVAVAQEPWSV 587
>gi|30249519|ref|NP_841589.1| AMP-dependent synthetase and ligase [Nitrosomonas europaea ATCC
19718]
gi|30138882|emb|CAD85460.1| AMP-dependent synthetase and ligase [Nitrosomonas europaea ATCC
19718]
Length = 612
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 172/342 (50%), Gaps = 49/342 (14%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISV 123
+V D LS LP H +ER GY++ G + Y ++R L+DDL +P +ISV
Sbjct: 228 VVTVRPDDVLLSFLPLSHTFERTAGYYVPMLCGATVAYARSIRQLQDDLLIIRPTILISV 287
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P +YE +Y+GIQ ++ A R++ + + + Y+ F+R QK+
Sbjct: 288 PRIYERIYAGIQAKLAEGPAISRLLFK--LAVDIGYSRFER---------QQKR------ 330
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGV 242
+ W I +LWPL +KLV +K+ +G V SGG +L I + +G+
Sbjct: 331 -VGWR----ISHLLWPL---LDKLVARKVMEKLGGRLWQVMSGGAALSPEISRVFIGLGL 382
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 302
+ GYGLTE+SPV+ A R N+ SVG P E+++ G + + +RG
Sbjct: 383 PILQGYGLTETSPVVCANRLDDNLPSSVGRPAPGVEVRL-----------GEQNALLIRG 431
Query: 303 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
VM GY+ NP AT L DGWLN+GD I +SR + + GR KD IV
Sbjct: 432 PNVMLGYWNNPEATHAILSADGWLNSGDTASI-----DAQSR-----VTITGRLKDIIVT 481
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 404
STGE + P ++E A LR + Q++++G+ + A+ V K
Sbjct: 482 STGEKIPPADMEAAILRDPIFEQVMIVGEGRSYLSALTVLSK 523
>gi|194333847|ref|YP_002015707.1| AMP-dependent synthetase and ligase [Prosthecochloris aestuarii DSM
271]
gi|194311665|gb|ACF46060.1| AMP-dependent synthetase and ligase [Prosthecochloris aestuarii DSM
271]
Length = 607
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 187/388 (48%), Gaps = 50/388 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQ 116
I+S I+ + D+ LS LP H YER GY++ F+ G + + ++ + ++ +
Sbjct: 211 NIKSCSTIIRLDESDRSLSFLPLSHAYERTGGYYLLFACGAAIYLAESIETVSLNIAEAK 270
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + +VP +++ + + I KQI S ++ +I+ C T Q
Sbjct: 271 PTIIFTVPRLFDRIRTNILKQIANESPVKQ-----------------KIFNWACSTGMQY 313
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
S I L H +AEKLVY KI G S + VSGG +LP +
Sbjct: 314 HKSSEKGKI--------SPTLTLQHKVAEKLVYHKISQKFGGSLRFFVSGGAALPQKVGE 365
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F++ +G+ + G+GLTE+SPV RP G+VG +N+ EI I S
Sbjct: 366 FFQGLGITILEGFGLTETSPVTNVNRPENVKFGTVGPVVNNVEISI-----------ASD 414
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G + RG +M+GY+ + +ATK+ + DGW +TGDIG + G L + R
Sbjct: 415 GEILFRGPSIMKGYWNDEAATKEVI-YDGWFHTGDIGELDED----------GYLRITDR 463
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K IV S G+N+ PL +E S + Q++V+G+ + A+IVP+ E+ A+
Sbjct: 464 KKHIIVTSGGKNIAPLPIEHLIAESPYVDQVMVVGEKRPFLTALIVPNYNELKNYAEEND 523
Query: 416 IVHADASELSKEKTISLLYGELRKWTSK 443
I A SEL K+K I+ L+ L + S+
Sbjct: 524 ISSASGSELLKDKQINKLFENLLRTVSR 551
>gi|339484361|ref|YP_004696147.1| AMP-dependent synthetase and ligase [Nitrosomonas sp. Is79A3]
gi|338806506|gb|AEJ02748.1| AMP-dependent synthetase and ligase [Nitrosomonas sp. Is79A3]
Length = 609
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 202/406 (49%), Gaps = 55/406 (13%)
Query: 62 SLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHY 119
S ++P GD LS LP H +ER GY++ G + Y +++ L++DL +P
Sbjct: 221 SCLQVIPVFPGDLLLSFLPLSHTFERTAGYYVPMMAGATIAYARSIQQLQEDLLTIRPTL 280
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
+ISVP +YE +Y+GI+ ++ S R + + Y+ F+ +G R +P+
Sbjct: 281 LISVPRIYERVYAGIRAKLAEGSGFARWLFN--FAVDVGYSRFE-CQQG----RGSWRPA 333
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 238
+ C LWP+ EKLV K+ + +G + +SGG +L + +
Sbjct: 334 H-------------C--LWPV---LEKLVASKVMNKLGGRLRFVMSGGAALSTEVSRIFI 375
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+G+ + GYG+TESSPV+ A R NV SVG PI E+K+ E N +L
Sbjct: 376 GLGLPILQGYGMTESSPVVCANRIKDNVPASVGLPIPGVEVKL--GEGNALL-------- 425
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+RG VM GY+ NP ATK + DGWLN+GDI I + + GR K+
Sbjct: 426 -IRGPNVMLGYWNNPEATKAIISSDGWLNSGDIASIDEQDH----------VTITGRLKE 474
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV--PDKEEVLMAAKRLSI 416
+VLSTGE V P ++E A LR L Q+++IG+ + ++V P ++ M L
Sbjct: 475 IVVLSTGEKVPPADMEAAILRDPLFDQVMLIGEARSYLSVLVVLNPALQKDFMTQYGLD- 533
Query: 417 VHADASELSKEKTISLLYGELRKWTSKCS--FQIGPIHVVDEPFTV 460
+ +E +++ +L ++ TS+ +I I V+ EP+++
Sbjct: 534 -GSLDNEQQRQQAEEILLNKVAHQTSEFPGYAKIRRIAVIPEPWSI 578
>gi|82701230|ref|YP_410796.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
gi|82409295|gb|ABB73404.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
Length = 663
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 166/334 (49%), Gaps = 51/334 (15%)
Query: 62 SLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHY 119
S +VP E D LS LP H +ER GY++ RG + Y ++ L++DL +P
Sbjct: 276 SCLQVVPIEESDVLLSFLPLSHTFERTAGYYVPMMRGSTVAYARSIPQLQEDLLIIRPTI 335
Query: 120 MISVPLVYETLYSGIQKQIFTSSA-ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
++SVP +YE +Y+GI+ ++ +RR+ A + Y F+ + R +K
Sbjct: 336 LVSVPRIYERVYAGIRAKLAEGPLLSRRLFDLA---VEIGYNRFE-----YQQGRAEKHF 387
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S+ LWPL E LV KK+ S +G +A +SGG +L + +
Sbjct: 388 SH---------------ALWPL---LEILVAKKVMSKLGGRLRAAMSGGAALSSEVSRIF 429
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
+G+ + GYG+TESSPV+ NV SVG PI E+K+ G +
Sbjct: 430 IGLGLPILQGYGMTESSPVVCCNTIEDNVPASVGRPIPGVEVKL-----------GEQNA 478
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
+ +RG VM GY+ N AT+ + DGWLN+GDI I G + + GR K
Sbjct: 479 LLIRGPNVMLGYWNNEEATRAVMTPDGWLNSGDIAEIDE----------AGHIAITGRVK 528
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 391
+ IV+STGE + P +E A LR L Q++V+G+
Sbjct: 529 EIIVMSTGEKIPPANMEAAILRDPLFEQVMVVGE 562
>gi|114330717|ref|YP_746939.1| AMP-dependent synthetase and ligase [Nitrosomonas eutropha C91]
gi|114307731|gb|ABI58974.1| AMP-dependent synthetase and ligase [Nitrosomonas eutropha C91]
Length = 612
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 170/342 (49%), Gaps = 49/342 (14%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISV 123
IV D LS LP H +ER GY+ G + Y + R L +DL +P +ISV
Sbjct: 228 IVTVTPDDILLSFLPLSHTFERTAGYYTPMLCGATIAYARSTRQLSEDLLIIRPTILISV 287
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P +YE +Y GIQ+++ SA R++ + + + ++ +++ G+ ++
Sbjct: 288 PRIYERIYVGIQEKLAEGSAVARLLFKLAVDVGYSRFEYQQGRTGWRISH---------- 337
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGV 242
+LWPL ++L+ +K+ +G V SGG +L + + A+G+
Sbjct: 338 ------------LLWPL---LDRLIARKVMEKLGGRLWQVMSGGAALSPEVSHTFIALGL 382
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 302
+ GYGLTE+SPV+ A R NV SVG PI E+K+ G + + +RG
Sbjct: 383 PILQGYGLTETSPVVCANRLNDNVPASVGKPIPGVEVKL-----------GEQNALLIRG 431
Query: 303 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
VM GY+ NP AT L DGWL++GD I +GR + + GR KD IV
Sbjct: 432 PNVMLGYWNNPEATSAILSADGWLDSGDTAQI---DEQGR-------ITITGRLKDIIVT 481
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 404
STGE + P ++E A L + Q+++IG+ + A++V K
Sbjct: 482 STGEKIPPADMEAAILHDPIFEQVMIIGEGRSYLSALVVLSK 523
>gi|291614318|ref|YP_003524475.1| AMP-dependent synthetase and ligase [Sideroxydans lithotrophicus
ES-1]
gi|291584430|gb|ADE12088.1| AMP-dependent synthetase and ligase [Sideroxydans lithotrophicus
ES-1]
Length = 602
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 180/373 (48%), Gaps = 66/373 (17%)
Query: 57 NFQIRSLYDIVPA---ENGDKFLSMLPPWHVYERACGYFI---------FSRGIELMYTA 104
N + + YD + D LS LP H +ER CGY++ ++R I L
Sbjct: 206 NNMLSNTYDAMATFMVRGDDLLLSFLPLSHTFERTCGYYLQVMTAATVAYARSIPL---- 261
Query: 105 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 164
L +DL+ +P +ISVP +YE +Y I ++ A +R++ + + +A ++
Sbjct: 262 ---LSEDLKTIKPTILISVPRIYERIYGAISTKLAEGPAFKRMLFHLAVEVGWARFLHQQ 318
Query: 165 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 223
G+ +PS+L LWPL +KLV +KI +G + V
Sbjct: 319 RRGGW-------KPSFL---------------LWPL---LDKLVAQKILERLGGRLRTTV 353
Query: 224 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 283
SGG +L I + +G+ V GYGLTE+SP+++ + N SVG PI ++K+
Sbjct: 354 SGGAALAPEISRVFVGLGLPVVQGYGLTETSPIVSGNKLDNNFPDSVGQPIRGVQVKL-- 411
Query: 284 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 343
G + + V+G VM GY+ NP AT+ +D DGWLNTGDI I+
Sbjct: 412 ---------GEQHALLVKGPNVMMGYWNNPEATRAMIDADGWLNTGDIAHISET------ 456
Query: 344 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
G + + GR K+ IVLS GE + P ++E A L LI Q+++ G+ + A+ V +
Sbjct: 457 ----GHIYITGRLKEIIVLSNGEKMPPADMEAAILHDPLIDQVMIYGEGRPYLIALAVLN 512
Query: 404 KEEVLMAAKRLSI 416
E L A ++ +
Sbjct: 513 PEVWLQVAAKVGV 525
>gi|89075579|ref|ZP_01161984.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium sp.
SKA34]
gi|89048719|gb|EAR54291.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium sp.
SKA34]
Length = 607
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 200/428 (46%), Gaps = 52/428 (12%)
Query: 10 HGYAYMSSFFSMFKVIFITLFFSRRDLPLFSFVLIDLNTWMPIPKMTNF-----QIRSLY 64
H A++ ++ F T ++ L + + T P M ++ QI +
Sbjct: 152 HYNAFVKQASGEYQQEFDTRLAEKQMDDLVTLIYTSGTTGTPKGVMLDYANIASQIEAHD 211
Query: 65 DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISV 123
+ + GD L LP HV+ERA ++ RG+ Y + N LK+ L +PHYM +V
Sbjct: 212 QRLALDEGDTSLCFLPLSHVFERAWTFYALHRGVVNCYLSDTNKLKEALITVKPHYMSAV 271
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P V+E +YSGI ++ + R+++ + + A ++ ++PS+L
Sbjct: 272 PRVFEKIYSGIHDKVSRAPLHRKMIFTWAVNMGAKMAAARQ---------ECREPSWL-- 320
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
L ++LAEK+V K+Q+ +G + K GG L I F+ AIG+
Sbjct: 321 -------------LKKSYVLAEKVVLSKLQAVLGGNIKFMPCGGAKLDAGIGRFFHAIGI 367
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 302
V++GYG+TE++ ++ +C S+G P+ E+KI E NE+L VRG
Sbjct: 368 NVKLGYGMTETTATVSCWDDSCYNPDSIGMPMPGAEVKI--GEQNEIL---------VRG 416
Query: 303 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
VM+GY+ P T + EDG+L TGD G++ G L + R K+ +
Sbjct: 417 PMVMRGYYNMPEETAKNFTEDGFLKTGDAGYLDEQ----------GNLFITDRIKELMKT 466
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 422
S G+ + P +E A + I QI VI ++ A+IVP E + A+ L+I + D
Sbjct: 467 SGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFETLEEHARELNIKYKDRL 526
Query: 423 ELSKEKTI 430
EL K I
Sbjct: 527 ELVKHSQI 534
>gi|110597451|ref|ZP_01385738.1| AMP-dependent synthetase and ligase [Chlorobium ferrooxidans DSM
13031]
gi|110340995|gb|EAT59466.1| AMP-dependent synthetase and ligase [Chlorobium ferrooxidans DSM
13031]
Length = 610
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 202/408 (49%), Gaps = 52/408 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQ 116
I+S I+ + D LS LP H YER GY++ FS G + + ++ + ++ +
Sbjct: 211 NIKSCSSIIRLDESDCGLSFLPLSHAYERTGGYYLLFSCGASIYLAESIETISMNMAEAR 270
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + +VP +++ + I KQI + +A ++ + ++ E + N+K
Sbjct: 271 PTIIFTVPRLFDRIKMSIIKQISSQNAIKQKIFYWAVQTG----------EKYHRQLNEK 320
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ A+L H LAEKLVY+KI+ G + VSGG +LP I
Sbjct: 321 GR--------------VTALLSLQHTLAEKLVYEKIKHKFGGRLRYFVSGGAALPQKIGE 366
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F++A+ + + G+GLTE+SPV RP G+VG +N+ +KI AE E+L
Sbjct: 367 FFQALEISILEGFGLTETSPVTHVNRPEKIKYGTVGPAVNNVTVKI--AEDGEIL----- 419
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
++G +M+GY+K+ AT++ + DGW TGDIG I G L + R
Sbjct: 420 ----LKGPNIMKGYWKDEEATREVI-RDGWFCTGDIGEIDKD----------GYLKITDR 464
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K IV S G+N+ PL +E S + Q++VIG+ + A+IVPD E+++ A
Sbjct: 465 KKHIIVTSGGKNIAPLPIENLISESPFVDQVIVIGEKRPFLIALIVPDFEKLMEYASSEG 524
Query: 416 IVHADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 460
I A EL + K++ +Y +L + S+ ++ ++D+ FTV
Sbjct: 525 IQAATNKELIESKSVIQIYDKLMRTISRQLATHEKVRKFLLIDDAFTV 572
>gi|448593389|ref|ZP_21652387.1| acyl-CoA synthetase [Haloferax elongans ATCC BAA-1513]
gi|445730297|gb|ELZ81887.1| acyl-CoA synthetase [Haloferax elongans ATCC BAA-1513]
Length = 667
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 168/336 (50%), Gaps = 48/336 (14%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ F+ G + Y + L+DD Q QP SVP VYE LY
Sbjct: 262 LSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLRDDFQLVQPTTGTSVPRVYEKLYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ Q S +R+ A + + Y + P YL+ L
Sbjct: 322 IRTQASESPLKKRIFEWA-VGVGKEY-------------HTSEAPGYLLEL--------- 358
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
H LA++LV+++++ A+G + + +SGGGSL + Y +G+ + GYGLTE
Sbjct: 359 ------KHQLADRLVFEQVRDALGGNMEFFISGGGSLSAELCALYHGMGLPIFEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
+SPVI+ P +G++G+P+ + E+K+ + L G G + VRG V +GY+
Sbjct: 413 TSPVISVNPPEEPKIGTIGYPLRNVEVKLDKTVVGDTLGDAGGDIGELLVRGPSVTEGYW 472
Query: 311 KNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
P T+ A +ED W TGDI + P G L RAK +VLSTG+
Sbjct: 473 NRPEETEAAFEEDDDGNRWFRTGDIVELRPD----------GYLAFRERAKQILVLSTGK 522
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 523 NVAPGPIEDAFASSDVVEQCMVLGDGRKFVSALIVP 558
>gi|448312176|ref|ZP_21501926.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
gi|445602683|gb|ELY56655.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
Length = 654
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 177/370 (47%), Gaps = 50/370 (13%)
Query: 65 DIVPA-ENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMI 121
D VP + K +S LP HV+ER G+F+ F+ G + Y + L++D + QP
Sbjct: 250 DDVPTLDQESKAMSYLPLAHVFERTAGHFVLFASGASVAYAEDPDTLQEDFELVQPTTAT 309
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
SVP VYE +Y GI++Q S A RR+ A + Y
Sbjct: 310 SVPRVYEKIYDGIREQASQSDAKRRIFEWA-TDVGVQYQE-------------------- 348
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
A IL LA+KLV+ ++ A+G + +SGGGSL + Y A+
Sbjct: 349 --------ADSPGPILKAKQALADKLVFSTVREALGGEIELLISGGGSLSKELCQLYHAM 400
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE---VLPAGSKGI 297
G+ + GYGLTE+SPV+ P +G++G ++ ++K+ ++ N+ G G
Sbjct: 401 GLPIYEGYGLTETSPVVTTNPPEAVKIGTIGPALDGVDLKVDESVANQEAFTDDPGDVGE 460
Query: 298 VKVRGSQVMQGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
+ V G V QGY+ P AT+ + D+DG W TGDI I P G L
Sbjct: 461 LLVSGPNVTQGYWNKPGATQGSFTEDDDGTRWFRTGDIVHIRPD----------GYLEFR 510
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
R K IVLSTG+NV P +E+A S ++ Q +V G ++ GA++VP++E V A
Sbjct: 511 DRVKQIIVLSTGKNVAPGPIEDAFAASEIVEQAMVTGDGEKFIGALLVPNEEHVRDWADE 570
Query: 414 LSIVHADASE 423
I D SE
Sbjct: 571 EGIDLPDDSE 580
>gi|448577228|ref|ZP_21642858.1| acyl-CoA synthetase [Haloferax larsenii JCM 13917]
gi|445727873|gb|ELZ79482.1| acyl-CoA synthetase [Haloferax larsenii JCM 13917]
Length = 667
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 167/336 (49%), Gaps = 48/336 (14%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ F+ G + Y + L+DD Q QP SVP VYE LY
Sbjct: 262 LSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLRDDFQLVQPTTGTSVPRVYEKLYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ Q S +R+ A + + Y + P YL+ L
Sbjct: 322 IRTQASESPLKKRIFEWA-VGVGKEY-------------HTSEAPGYLLEL--------- 358
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
H LA++LV+++++ A+G + + +SGGGSL + Y +G+ + GYGLTE
Sbjct: 359 ------KHQLADRLVFEQVRDALGGNMEFFISGGGSLSAELCALYHGMGLPIFEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
+SPVI+ P +G++G+P+ + E+K+ + L G G + VRG V +GY+
Sbjct: 413 TSPVISVNPPEEPKIGTIGYPLRNVEVKLDKTVVGDTLGDAGGDIGELLVRGPSVTEGYW 472
Query: 311 KNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
P T+ A +ED W TGDI R G L RAK +VLSTG+
Sbjct: 473 NRPEETESAFEEDDDGNRWFRTGDI----------VEHRPDGYLAFRERAKQIMVLSTGK 522
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 523 NVAPGPIEDAFASSDVVEQCMVLGDGRKFVSALIVP 558
>gi|448383967|ref|ZP_21562965.1| AMP-dependent synthetase and ligase [Haloterrigena thermotolerans
DSM 11522]
gi|445658956|gb|ELZ11768.1| AMP-dependent synthetase and ligase [Haloterrigena thermotolerans
DSM 11522]
Length = 652
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 174/342 (50%), Gaps = 49/342 (14%)
Query: 76 LSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
+S LP HV+ER G+F +F+ G + Y + L++D QP SVP VYE +Y G
Sbjct: 262 MSYLPLAHVFERTAGHFALFAGGTCIAYAESPDTLQEDFSTVQPTTATSVPRVYEKIYDG 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+++ SS +RR+ A + AY + + P
Sbjct: 322 IREEASGSSVSRRIFEWA-TDVGVAY-------------QQAESPG-------------- 353
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
AIL LA+KLV+ ++ A+G + + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 354 -AILKAKQALADKLVFSTVREALGGNIEILISGGGSLSPELCRLYHAMGLPIFEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE---VLPAGSKGIVKVRGSQVMQGY 309
+SP++A P +G++G +++ E+K+ +A ++ AG G + V G V QGY
Sbjct: 413 TSPIVATNPPEGAKIGTIGPTLSNVEVKVDEAIADQDAFTDDAGEVGELLVNGPNVTQGY 472
Query: 310 FKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
+ P AT+ A D+DG W TGDI + P G L R K IVLSTG
Sbjct: 473 WNKPGATEGAFTEDDDGTRWFRTGDIIHVRPD----------GYLEFRDRVKQIIVLSTG 522
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
+NV P LE+A S ++ Q +V+G ++ GA++VP+ V
Sbjct: 523 KNVAPGPLEDAFAASEVVEQAMVVGDGEKFIGALLVPNTNHV 564
>gi|145219737|ref|YP_001130446.1| AMP-dependent synthetase and ligase [Chlorobium phaeovibrioides DSM
265]
gi|145205901|gb|ABP36944.1| AMP-dependent synthetase and ligase [Chlorobium phaeovibrioides DSM
265]
Length = 610
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 199/408 (48%), Gaps = 52/408 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQ 116
++S D++ + D LS LP H YER GY++ F G + + ++ + ++ +
Sbjct: 211 NVKSCSDLITLDETDCSLSFLPLSHAYERTGGYYLLFGCGAAIYLAESIETVSLNIAEAK 270
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + +VP +++ + + +QKQI T S ++ + SFA + ++ K
Sbjct: 271 PTIIFTVPRLFDRIRANMQKQIATESQLKQRI------FSFALSTGEQYNRQMA-----K 319
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ S +AL H L+ KLVYKKI + G + VSGG +LP
Sbjct: 320 KGSVSLAL-------------KAAHALSRKLVYKKILAKFGGRLRYFVSGGAALPKETGE 366
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
++ ++G+ + GYGLTE+SP+ RP G+VG + + EI+I D
Sbjct: 367 YFSSLGITILEGYGLTETSPITNVNRPEKVKFGTVGPTVRNVEIRIAD-----------D 415
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G + +G +M+GY+K+ AT + + +DGW +TGDIG + G L + R
Sbjct: 416 GEILFKGPNIMKGYWKDVEATAEVI-KDGWFHTGDIGRLDDD----------GYLTITDR 464
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K IV S G+N+ PL +E S + Q++VIG+ + A+I+PD E++ A
Sbjct: 465 KKHIIVTSGGKNIAPLPIEHLIAESPFVEQVIVIGEKRPFLIALIIPDFEKLREFAVTAG 524
Query: 416 IVHADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 460
I A EL + K +S +Y +L + S+ ++ +V EPFT+
Sbjct: 525 IGDATEKELLENKAVSQIYEKLLRSISRKLATHEKVRKFLLVAEPFTL 572
>gi|330448784|ref|ZP_08312431.1| AMP-binding enzyme family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492975|dbj|GAA06928.1| AMP-binding enzyme family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 607
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 181/375 (48%), Gaps = 49/375 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQP 117
QI + + + G L LP HV+ERA +++ RG+ Y + N LK+ L +P
Sbjct: 206 QIEAHDQRLALDEGGTSLCFLPLSHVFERAWTFYVLHRGVVNCYLSDTNKLKEALVTVKP 265
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ-K 176
HYM +VP V+E +YSGI + V+RA + +T + + R + +
Sbjct: 266 HYMSAVPRVFEKIYSGIHDK----------VSRAQLHRKMIFTWAVNMGAKMSVARQECR 315
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+PS+L L H LAEK+V K+Q+ +G + K GG L I
Sbjct: 316 EPSWL---------------LKKSHALAEKVVLSKLQAVLGGNIKFMPCGGAKLDAGIGR 360
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ AIG+ V++GYG+TE++ ++ +C S+G P+ E+KI + NE+L
Sbjct: 361 FFHAIGINVKLGYGMTETTATVSCWDDSCYNPDSIGMPMPGAEVKI--GQENEIL----- 413
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
VRG VM+GY+ P T + EDG+L TGD G+I G L + R
Sbjct: 414 ----VRGPMVMRGYYNMPEETAKNFTEDGFLKTGDAGYIDEQ----------GNLFITDR 459
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K+ + S G+ + P +E A + I QI VI ++ A+IVP E + A+ L+
Sbjct: 460 IKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFETLEEHARELN 519
Query: 416 IVHADASELSKEKTI 430
I + D EL K I
Sbjct: 520 IKYKDRLELIKHSQI 534
>gi|90580779|ref|ZP_01236582.1| putative long-chain-fatty-acid-CoAligase [Photobacterium angustum
S14]
gi|90438047|gb|EAS63235.1| putative long-chain-fatty-acid-CoAligase [Vibrio angustum S14]
Length = 607
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 181/374 (48%), Gaps = 47/374 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQP 117
QI + + + GD L LP HV+ERA ++ RG+ Y + N LK+ L +P
Sbjct: 206 QIEAHDQRLALDEGDTSLCFLPLSHVFERAWTFYALHRGVVNCYLSDTNKLKEALITVKP 265
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
HYM +VP V+E +YSGI ++ + R+++ + + A ++ ++
Sbjct: 266 HYMSAVPRVFEKIYSGIHDKVSRAPLHRKMIFTWAVNMGAKMAAARQ---------ECRE 316
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 236
PS+L L + LAEK+V K+Q+ +G + K GG L I F
Sbjct: 317 PSWL---------------LKKSYALAEKVVLSKLQAVLGGNIKFMPCGGAKLDAGIGRF 361
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+ AIG+ V++GYG+TE++ ++ +C S+G P+ E+KI E NE+L
Sbjct: 362 FHAIGINVKLGYGMTETTATVSCWDDSCYNPDSIGMPMPGAEVKI--GEQNEIL------ 413
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
VRG VM+GY+ P T + EDG+L TGD G++ G L + R
Sbjct: 414 ---VRGPMVMRGYYNMPEETAKNFTEDGFLKTGDAGYLDEQ----------GNLFITDRI 460
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
K+ + S G+ + P +E A + I QI VI ++ A+IVP E + A+ L+I
Sbjct: 461 KELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFETLEEHARELNI 520
Query: 417 VHADASELSKEKTI 430
+ D EL K I
Sbjct: 521 KYKDRLELVKHSQI 534
>gi|189500240|ref|YP_001959710.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
BS1]
gi|189495681|gb|ACE04229.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
BS1]
Length = 609
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 198/408 (48%), Gaps = 53/408 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQ 116
++S I+ + D+ LS LP H YER GY++ F+ G + + ++ + ++ +
Sbjct: 211 NVKSCSSILRIDETDRSLSFLPLSHAYERTGGYYLLFACGARIYLAESIETVSLNIAEAK 270
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + +VP +++ + + I KQI T S ++ + Y K++ EG
Sbjct: 271 PTIIFTVPRLFDRIRTNILKQIKTQSPTKQKIFDWARATGIEYQ--KQLQEG-------- 320
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+PS ++AL H +A+KLVY KIQ G + + VSGG +LP I
Sbjct: 321 KPSMILAL---------------KHGIADKLVYTKIQERFGGNLRYFVSGGAALPRKIGE 365
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F++A G+ + GYGLTE+SPV RP G+VG +++ +KI S
Sbjct: 366 FFQAFGITILEGYGLTETSPVTNVNRPEKVKFGTVGPVLDNVTLKI-----------ASD 414
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G V RG +M+GY+ + SAT + + DGW +TGDIG + G L + R
Sbjct: 415 GEVLFRGPNIMKGYWNDESATGEVI-HDGWFHTGDIGELDED----------GYLKITDR 463
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K IV S G+N+ PL +EE +S + Q++VIG+ + A+IVP E++ A
Sbjct: 464 KKHIIVTSGGKNIAPLPIEELIAENSYVDQVMVIGEKRPFLVALIVPVFSELVSFADEQQ 523
Query: 416 IVHADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 460
I L + K I +Y L + S+ ++ ++ EPF++
Sbjct: 524 ITSKTRESLLENKEILKIYESLLRTISRQLATHEKVRKFILIQEPFSI 571
>gi|448323701|ref|ZP_21513154.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
gi|445620837|gb|ELY74324.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
Length = 648
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 174/357 (48%), Gaps = 44/357 (12%)
Query: 65 DIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMIS 122
D+ + +S LP HV+ER G+F+ F+ G + Y + L++D + +P+ S
Sbjct: 251 DVASVDENSLTVSYLPLAHVFERTAGHFLMFASGACVGYAEDPDTLQEDFETVEPNTATS 310
Query: 123 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 182
VP VYE +Y I++Q S+ R+ A
Sbjct: 311 VPRVYEKIYDAIREQASESAVKERIFDWATD----------------------------- 341
Query: 183 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 241
+++ A IL LA+KLV+ ++ +G + + +SGGGSL + Y A+G
Sbjct: 342 VGVEYQEADTPGPILSAKQALADKLVFSTVREGLGGNLEILISGGGSLSKELCTLYHAMG 401
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVK 299
+ + GYGLTE++PV+ P +G++G + E++I ++ N+ G G +
Sbjct: 402 LPIYEGYGLTETAPVVTVNPPEEPKIGTIGPALPDVELRIDESVANQAAFDDPGEVGELL 461
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
V+G V +GY+ P AT ++ EDGW TGDI + P G + R K
Sbjct: 462 VKGPNVTEGYWDKPGATDRSFTEDGWFKTGDIVHLRPD----------GYVEFRDRVKQL 511
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
IVLSTG+NV P +E+A S ++ Q +V+G D++ GA++VPD + V A++ I
Sbjct: 512 IVLSTGKNVAPGPIEDAFAASEVVDQAMVVGNDEKFVGALLVPDTDHVREWAEKAGI 568
>gi|448303788|ref|ZP_21493734.1| AMP-dependent synthetase and ligase [Natronorubrum sulfidifaciens
JCM 14089]
gi|445592415|gb|ELY46602.1| AMP-dependent synthetase and ligase [Natronorubrum sulfidifaciens
JCM 14089]
Length = 648
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 165/336 (49%), Gaps = 45/336 (13%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
+S LP HV+ER G+F+ F+ G + Y + L+ D QP SVP VYE +Y
Sbjct: 262 VSYLPLAHVFERTAGHFVLFASGACVAYAESPDTLQADFSAVQPTTATSVPRVYEKIYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q S A +R+ A +++ A
Sbjct: 322 IREQASESGAKKRIFEWATD-----------------------------VGVEYQQADSP 352
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
+L LA+KLV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 353 GVVLNAKRKLADKLVFSTVREALGGEIELLISGGGSLSTDLCQLYHAMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK---VRGSQVMQGY 309
+SPV++ P +G++G+P+ +++I + ++ A G V V+G V QGY
Sbjct: 413 TSPVVSTNPPEAVKIGTIGYPLPGVDVQIDERVADQAAFADDPGDVGELLVKGPNVTQGY 472
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ P AT A EDGW TGDI +R G L RAK +VLSTG+NV
Sbjct: 473 WNKPGATTGAFTEDGWFRTGDI----------IHQRPDGFLEFRERAKQIMVLSTGKNVA 522
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P +E+A S +I Q +V+G ++ GA++VP+ +
Sbjct: 523 PAPIEDAFAASEIIEQCMVVGDGEKFIGALLVPNSD 558
>gi|374852591|dbj|BAL55521.1| long-chain acyl-CoA synthetase [uncultured Acidobacteria bacterium]
Length = 555
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 179/367 (48%), Gaps = 48/367 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D LS+LP H +ER Y G+ + Y + + ++L+ +P ++ VP ++E +
Sbjct: 177 DVVLSILPLSHSFERMAFYCYLHAGLSIAYAESFDKVAENLRDIRPTVLVGVPRLFEKM- 235
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ +I +S A + R L+ ++ A +R C R +++ L + W
Sbjct: 236 ---RARILEASRALPGLKRHLV--AWGLRAGER-----C-ERARRRGDALSPWLRWQ--- 281
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYG 249
H +AE+ V +I+ IG+ +A +SGG +L + F+ +G+++ GYG
Sbjct: 282 ---------HAVAERTVLARIREHIGLDRARSLISGGAALSPDVAYFFLGLGLEILQGYG 332
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+SPV+ P N +G+VG PI E+KI AE E+L VRG VM GY
Sbjct: 333 LTETSPVVTVNPPGANKIGTVGRPIPGVEVKI--AEDGEIL---------VRGPNVMLGY 381
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ P T A EDGWL TGD+G++ G LV+ R KD + S G+ V
Sbjct: 382 YNRPEETAAAFTEDGWLRTGDVGFLD----------ADGYLVITDRKKDLMKTSGGKYVA 431
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 429
P LE + S LI Q VV+G ++ P A+IVP+ E + A I +A +L
Sbjct: 432 PQALENRLVASPLIAQAVVVGDGRKFPAALIVPNFEALRRYAAAQGIPFREAHQLCAHPK 491
Query: 430 ISLLYGE 436
I LY E
Sbjct: 492 IRRLYEE 498
>gi|429191224|ref|YP_007176902.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
gi|429135442|gb|AFZ72453.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
Length = 653
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 174/357 (48%), Gaps = 44/357 (12%)
Query: 65 DIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMIS 122
D+ + +S LP HV+ER G+F+ F+ G + Y + L++D + +P+ S
Sbjct: 256 DVASVDENSLTVSYLPLAHVFERTAGHFLMFASGACVGYAEDPDTLQEDFETVEPNTATS 315
Query: 123 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 182
VP VYE +Y I++Q S+ R+ A
Sbjct: 316 VPRVYEKIYDAIREQASESAVKERIFDWATD----------------------------- 346
Query: 183 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 241
+++ A IL LA+KLV+ ++ +G + + +SGGGSL + Y A+G
Sbjct: 347 VGVEYQEADTPGPILSAKQALADKLVFSTVREGLGGNLEILISGGGSLSKELCTLYHAMG 406
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVK 299
+ + GYGLTE++PV+ P +G++G + E++I ++ N+ G G +
Sbjct: 407 LPIYEGYGLTETAPVVTVNPPEEPKIGTIGPALPDVELRIDESVANQAAFDDPGEVGELL 466
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
V+G V +GY+ P AT ++ EDGW TGDI + P G + R K
Sbjct: 467 VKGPNVTEGYWDKPGATDRSFTEDGWFKTGDIVHLRPD----------GYVEFRDRVKQL 516
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
IVLSTG+NV P +E+A S ++ Q +V+G D++ GA++VPD + V A++ I
Sbjct: 517 IVLSTGKNVAPGPIEDAFAASEVVDQAMVVGNDEKFVGALLVPDTDHVREWAEKAGI 573
>gi|253700714|ref|YP_003021903.1| AMP-dependent synthetase and ligase [Geobacter sp. M21]
gi|251775564|gb|ACT18145.1| AMP-dependent synthetase and ligase [Geobacter sp. M21]
Length = 603
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 179/383 (46%), Gaps = 55/383 (14%)
Query: 58 FQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQR 114
F +R+ D V GD FLS LP HV+ER+ GY++ S G + + ++ + +++
Sbjct: 208 FDVRATLDKVGGVGQGDLFLSFLPLSHVFERSAGYYLPLSCGAAIAFADSMEKISENMME 267
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS--FAYTAFKRIYEGFCLT 172
P M+ VP +E +YS I + + S +R + R + + +AY + Y F
Sbjct: 268 LHPTIMVCVPRFFEKIYSRIYEAVHQLSLFKRKMFRRALAVGRRYAYARYIDKYVPF--- 324
Query: 173 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
WL + H +A++LV+ K++S G K SGG L
Sbjct: 325 --------------WLSLQ---------HAIADRLVFSKLRSRFGDRLKFCASGGAPLDR 361
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
I+ F+ +IGV V GYGLTE+SPV+ + GSVG P+ TEI I
Sbjct: 362 EINEFFWSIGVPVFEGYGLTETSPVLCSNSFDALRFGSVGTPLASTEIAI---------- 411
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G V RG QVM GYF + +AT++AL DGW TGDIG R G L
Sbjct: 412 -AGDGEVLARGPQVMAGYFNDEAATREAL-VDGWFRTGDIG-----------RMEEGYLY 458
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
+ R KD IV + G+N+ P +E R I Q V G + A++VP E +L A
Sbjct: 459 ITDRKKDLIVTAAGKNIAPQPIENLLKRDKYISQAYVYGDRKPYLTALLVPTLERLLEFA 518
Query: 412 KRLSIVHADASELSKEKTISLLY 434
+ I + D +L + + LY
Sbjct: 519 QERKIAYHDLEDLVVHQPVIELY 541
>gi|448297936|ref|ZP_21487970.1| AMP-dependent synthetase and ligase [Natronorubrum tibetense GA33]
gi|445592662|gb|ELY46848.1| AMP-dependent synthetase and ligase [Natronorubrum tibetense GA33]
Length = 652
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 177/371 (47%), Gaps = 52/371 (14%)
Query: 65 DIVPA-ENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMI 121
D VPA + + +S LP HV+ER G+F+ F+ G + Y + L++D QP
Sbjct: 250 DDVPALDEESQAVSYLPLAHVFERTAGHFVLFATGACVAYAESSETLQEDFSLVQPTTAT 309
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
SVP VYE +Y I++Q SS R+ A
Sbjct: 310 SVPRVYEKIYDAIREQASESSVKERIFEWATD---------------------------- 341
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
+++ A IL LA+KLV+ ++ A+G + +SGGGSL + Y A+
Sbjct: 342 -VGVEYQRADSPGPILNAKRSLADKLVFSTVREALGGEIELLISGGGSLSPELCQLYHAM 400
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI----VDAETNEVLPAGSKG 296
G+ + GYGLTE+SPV+ P +G++G + +++I VD ET P G G
Sbjct: 401 GLPIYEGYGLTETSPVVTTNPPEAVKIGTIGPALPGVDLRIDETVVDQETFTDDP-GEVG 459
Query: 297 IVKVRGSQVMQGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVL 352
+ V+G V QGY+ P AT+ A DEDG W TGDI + P G L
Sbjct: 460 ELLVKGPNVTQGYWNKPGATRSAFTEDEDGDRWFRTGDIVHLRPD----------GYLEF 509
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 412
RAK IVLSTG+NV P LE+A S +I Q +V+G ++ GA++VP+ E V A
Sbjct: 510 RDRAKQIIVLSTGKNVAPGPLEDAFAASEIIEQAMVVGDGEKFIGALLVPNTEHVRDWAS 569
Query: 413 RLSIVHADASE 423
I D E
Sbjct: 570 EEGIDLPDDPE 580
>gi|378824089|ref|ZP_09846634.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
gi|378597083|gb|EHY30426.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
Length = 608
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 193/412 (46%), Gaps = 48/412 (11%)
Query: 57 NF--QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDL 112
NF ++ + V G+ FLS LP H +ER GY++ + G + Y +V L +DL
Sbjct: 207 NFVANVKDTLECVSPRAGEVFLSFLPLSHTFERMAGYYLALATGCTIAYNRSVLLLAEDL 266
Query: 113 QRYQPHYMISVPLVYETLYSGIQKQIFTSS-AARRVVARALIRISFAYTAFKRIYEGFCL 171
+ +P +ISVP VYE +++ +Q+++ SS +ARR+ A +R+ +A FC
Sbjct: 267 KTIRPQVIISVPRVYERIHARVQEKLKKSSPSARRLFGEA-VRVGWA---------DFC- 315
Query: 172 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPM 231
+N +P A W +I A L P ++ Q G + +SGG ++
Sbjct: 316 EKNGIRPE---ADAHRWWDGLIRAFLLP------RVRETLAQQFGGRLRVAISGGAAVNP 366
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
+ + +G+ + GYG+TE+SP+IA N +VGHP H E+++
Sbjct: 367 KVARTFCGLGLPIIQGYGMTETSPIIAGNNLELNHPDTVGHPFQHVEVRL---------- 416
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G ++VRG VM+GY+ P T A DGWL TGDIG P G+L
Sbjct: 417 -GEGDEIEVRGPSVMKGYWGRPEDTAAAFTPDGWLKTGDIGEWTPE----------GMLR 465
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
++GR K+ IV STGE + P +LE A L Q V+G+++ G + V +K E
Sbjct: 466 IKGRIKEIIVTSTGEKIPPADLESAIETDPLFAQTWVVGENRPYLGLVCVLEKNEWAALC 525
Query: 412 KRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVV--DEPFTVN 461
+ D + LS + S + + P VV EP+T+
Sbjct: 526 AEEGLDPEDPASLSAARAKSSVLKRAKTAAGDFPHYALPRAVVLTQEPWTIE 577
>gi|292656046|ref|YP_003535943.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|448290037|ref|ZP_21481193.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|291372084|gb|ADE04311.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|445580429|gb|ELY34808.1| acyl-CoA synthetase [Haloferax volcanii DS2]
Length = 666
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 166/336 (49%), Gaps = 48/336 (14%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ F+ G + Y + L++D Q +P SVP VYE LY
Sbjct: 262 LSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ Q S A +RV A + + AY P YL
Sbjct: 322 IRAQASESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL------------ 355
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
L H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 356 ---LTAKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
+SPVI+ P +G++G+P+ + E K+ + L G G + VRG V +GY+
Sbjct: 413 TSPVISVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGEAGGEVGELLVRGPSVTEGYW 472
Query: 311 KNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+P T+ A ED W TGD+ RR G + RAK +VLSTG+
Sbjct: 473 NDPEETEAAFVEDDEGRRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGK 522
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 523 NVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|322419627|ref|YP_004198850.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
gi|320126014|gb|ADW13574.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
Length = 603
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 179/368 (48%), Gaps = 50/368 (13%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVY 127
E G+ FLS LP HV ER+ GY++ +RG + + ++ + +++ QP M+ VP ++
Sbjct: 221 EEGEVFLSFLPLSHVLERSTGYYLPVARGAMIAFADSIEKIAENMLEVQPTVMVCVPRLF 280
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E ++S I + + S +R + + ++ I Y + I K+ +L+AL
Sbjct: 281 EKIHSRIHEYVHELSLYKRKLFKTVLSIGRRYVYARYI---------DKKVPFLLAL--- 328
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
H +A++LV+KK++ G + K GG L I+ F+ +IGV +
Sbjct: 329 ------------QHAVADRLVFKKLRRRFGDNLKFCSCGGAPLDREINEFFWSIGVPILE 376
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE+SPV+ GSVG P+ TE I AG G + VRG QVM
Sbjct: 377 GYGLTETSPVLCNNTFDKLRFGSVGTPLESTEFTI----------AGD-GEILVRGPQVM 425
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY+K+ ATK+A DGW TGDIG R LV+ R KD IV + G+
Sbjct: 426 LGYYKDEEATKEAF-RDGWFKTGDIG-----------RLEDDFLVITDRKKDLIVTAAGK 473
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
N+ P +E R + Q V G + A++VP E++L A+ + + D +L
Sbjct: 474 NIAPQPIENLLKRDKYVSQAYVYGDRKPYLTALLVPTLEKLLEFAREKQLTYTDLEDLVV 533
Query: 427 EKTISLLY 434
+ + LY
Sbjct: 534 HEPVLELY 541
>gi|448307028|ref|ZP_21496929.1| AMP-dependent synthetase and ligase [Natronorubrum bangense JCM
10635]
gi|445596575|gb|ELY50660.1| AMP-dependent synthetase and ligase [Natronorubrum bangense JCM
10635]
Length = 648
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 165/336 (49%), Gaps = 45/336 (13%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
+S LP HV+ER G+F+ F+ G + Y + L++D QP SVP VYE +Y
Sbjct: 262 VSYLPLAHVFERTAGHFVLFASGSCVAYAESPDTLQEDFGTVQPTMATSVPRVYEKIYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q S +R+ A +++ A
Sbjct: 322 IREQASESGVKKRIFEWATD-----------------------------VGVEYQQADSP 352
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
IL +A+ LV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 353 GPILSAKQSIADTLVFSTVREALGGEIELLISGGGSLSADLCQLYHAMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---PAGSKGIVKVRGSQVMQGY 309
+SPV++ P +G++G+P+ ++KI ++ ++ G G + V+G V QGY
Sbjct: 413 TSPVVSTNPPEAVKIGTIGYPLPGVDVKIDESAADQAAFTDDPGDVGELLVKGPNVTQGY 472
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ P AT A +DGW TGDI +R G L RAK +VLSTG+NV
Sbjct: 473 WNKPGATTGAFTDDGWFRTGDI----------IHQRPDGFLEFRERAKQIMVLSTGKNVA 522
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P +E+A S +I Q +V+G ++ GA++VP+ +
Sbjct: 523 PAPIEDAFAASEIIEQCMVVGDGEKFIGALLVPNSD 558
>gi|373459375|ref|ZP_09551142.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371721039|gb|EHO42810.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 597
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 171/352 (48%), Gaps = 48/352 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFS-RGIELMYT-AVRNLKDDLQRYQ 116
I + +V D FLS LP H++ER G+F+ + +G + Y ++ + D++Q +
Sbjct: 205 NIEGILGVVDLYAEDIFLSFLPLSHIFERLAGHFLSNHQGSTVAYAESIDTVADNMQEIK 264
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M+SVP +YE +Y+ + + + +R +I + R Y + + N+K
Sbjct: 265 PTVMVSVPRLYEKIYARVLENVEMGPPLKR-------KIFYWALGVGREYVNYVM--NKK 315
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+L L + LA KLV+ K+Q +G + VSGG L I
Sbjct: 316 PLPFL---------------LKKKYNLANKLVFHKLQERVGGRIRFFVSGGAPLSAEIAE 360
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ A G+ + GYGLTE+SPVI P G VG P+ + E+KI E E+L
Sbjct: 361 FFTAAGLIILEGYGLTETSPVITVNLPDNFKFGYVGPPLPNVEVKI--DEDGEIL----- 413
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
RG VM GYFK ATK+ +D++GW +TGDIG I G L + R
Sbjct: 414 ----TRGPHVMVGYFKKEDATKEVIDDEGWFHTGDIGLIDED----------GFLKITDR 459
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
K+ IV S G+N+ P +E + + I Q VVIG ++ AIIVP E V
Sbjct: 460 KKNIIVTSGGKNIAPQPIENMLVTTQYIEQAVVIGDKRKFCTAIIVPAFEAV 511
>gi|303257837|ref|ZP_07343847.1| putative long-chain-fatty-acid--CoA ligase [Burkholderiales
bacterium 1_1_47]
gi|330998741|ref|ZP_08322469.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
gi|302859440|gb|EFL82521.1| putative long-chain-fatty-acid--CoA ligase [Burkholderiales
bacterium 1_1_47]
gi|329576238|gb|EGG57754.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
Length = 610
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 196/414 (47%), Gaps = 46/414 (11%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQ 116
++S ++ + D FLS LP H +ER YF G E+ + +V L +DL+ +
Sbjct: 210 NVKSFSQVIDVGSDDVFLSFLPFSHTFERTVTFYFTLFLGAEVGFARSVLKLAEDLKIIR 269
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P ++VP V+E +S I+ + + + I + A A + FC
Sbjct: 270 PTIFVAVPRVFEQFHSRIKASLQSKGS---------IAATLADQAEMIGWRRFCRRNGLA 320
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLF 236
PS + +D + +WP+ L ++V G + ++GG +L I F
Sbjct: 321 VPSSSASWLD--------SFIWPM--LESRIVLPIRDVFGGRLRIAIAGGAALNNAIGRF 370
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
Y A+GV+++ GYGLTE+SPVI+ R CN +VG PI +I++ D E
Sbjct: 371 YNAMGVELRQGYGLTETSPVISVNRENCNNPVTVGQPIPGLQIRLGDIEE---------- 420
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
++V+G VM+GY+K P AT + EDGW TGD A GR R ++GR
Sbjct: 421 -LQVKGPTVMKGYWKRPDATAEVFTEDGWFRTGD---QADLSDAGRIR-------IKGRI 469
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
K+ IV STGE + P ++E A L Q++V+G+ + A+ V ++ E AK ++
Sbjct: 470 KEIIVTSTGEKIPPTDMELAIQTDPLFEQVMVVGEARPFITALAVVNEAEWEKFAKEFNV 529
Query: 417 VHADASELSKEKTISLLYGELRKWTSKCSFQIG---PIHVVDEPFTVNFLCLAL 467
+D L + L+K S+ Q G I ++ E +TV+ CL +
Sbjct: 530 DPSDDRMLMRRDIRMAALKRLKKAASRFP-QYGIPRNIRLLKEHWTVDNGCLTV 582
>gi|448612502|ref|ZP_21662524.1| acyl-CoA synthetase [Haloferax mucosum ATCC BAA-1512]
gi|445741350|gb|ELZ92852.1| acyl-CoA synthetase [Haloferax mucosum ATCC BAA-1512]
Length = 667
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 173/348 (49%), Gaps = 53/348 (15%)
Query: 67 VPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISV 123
VPA N D LS LP HV+ER G+F+ F+ G + Y + L++D Q +P SV
Sbjct: 252 VPAINPDAVALSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLVRPTTGTSV 311
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P VYE LY I+ Q S +R+ A + + AY P YL++
Sbjct: 312 PRVYEKLYDAIRTQASDSPVKKRIFEWA-VGVGQAY-------------HTTDSPGYLLS 357
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
H LA++LV+ +++ A+G + + +SGGGSL + Y A+G+
Sbjct: 358 A---------------KHRLADRLVFNQVREALGDNLEFFISGGGSLSAELCALYHAMGL 402
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK----IVDAETNEVLPAGSKGIV 298
+ GYGLTE+SPVI P +G++G+P+ + E+K +V +T + G G +
Sbjct: 403 PIFEGYGLTETSPVITVNPPEAPKIGTIGYPLRNVEVKLDTTVVGDQTGDA--GGDVGEL 460
Query: 299 KVRGSQVMQGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
V G V GY+ P T+ A D+DG W TGD+ + P G +
Sbjct: 461 LVHGPSVTAGYWNRPEETEAAFVEDDDGTRWFRTGDVVELRPD----------GYVTFRE 510
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 511 RAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|350553696|ref|ZP_08922861.1| Long-chain-fatty-acid--CoA ligase [Thiorhodospira sibirica ATCC
700588]
gi|349790080|gb|EGZ44004.1| Long-chain-fatty-acid--CoA ligase [Thiorhodospira sibirica ATCC
700588]
Length = 604
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 177/349 (50%), Gaps = 49/349 (14%)
Query: 75 FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP H ER GY++ G E+ ++ +V+ L +DLQ +P +ISVP +YE +Y+
Sbjct: 229 FLSFLPLSHTLERTAGYYMPMMLGAEVAFSRSVQQLPEDLQAIRPTVLISVPRIYERIYA 288
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
+Q + S +AR L ++ T ++R R Q + + L+
Sbjct: 289 KVQMGLEEKSP----LARKLFSLTLD-TGWQR------FERQQGRAGWHPKLL------- 330
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
LWPL LA ++V KI + +G + VSGG LP I F+ +GV V GYG+T
Sbjct: 331 ----LWPL--LA-RIVAGKITARLGGRLQYAVSGGAPLPPPIAQFFIGLGVPVYHGYGMT 383
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E+SPVI+ R N+ S+G P+ E+KI G+ V R +MQGY+
Sbjct: 384 EASPVISVNRTDDNIPASIGTPLPGVEVKI-----------GANDEVLTRSPCIMQGYWN 432
Query: 312 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 371
N AT++ +D +GWL+TGD H G L + GR K+ IVLS+GE V P
Sbjct: 433 NAEATREVIDAEGWLHTGDKARYDEH----------GHLYITGRIKEIIVLSSGEKVPPA 482
Query: 372 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 420
++E A L Q +V+G+ + AI+V ++E+ A+ L + D
Sbjct: 483 DMEMAITLDPLFEQAMVVGEGKPFLSAIVVLNEEQWPAFAQSLELDPED 531
>gi|108804880|ref|YP_644817.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108766123|gb|ABG05005.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 592
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 171/334 (51%), Gaps = 48/334 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP HV+ER CG F+ G + Y +V + ++L+ +P M SVP +YE +
Sbjct: 219 DVFLSFLPLSHVFERTCGQFLALGVGASVYYAESVEKVPENLREVRPTVMPSVPRLYEKM 278
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
+ ++ + S +R + A A +R YE L R + L
Sbjct: 279 HDRVRAMVAGGSPVKRWL------FGRAVAAGRRRYE--VLDRGGRP---------GLPL 321
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
R A+ ++LV+++++ A+G + VSGG L + F+ A G+K+ GYG
Sbjct: 322 RAALAVY-------DRLVFRRLREAVGGRVRFFVSGGAKLDTEVGKFFYAAGIKIMEGYG 374
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+SPVIA R G+VG P+++ E++I +G ++VRG VM+GY
Sbjct: 375 LTETSPVIACNRLEKPRFGTVGLPLSNLEVRI-----------SPEGEIQVRGPSVMRGY 423
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
F++ +T++A +DG+ TGDIG G L + R K IVLSTG+NV
Sbjct: 424 FRDERSTEEAFTQDGFFRTGDIGSFDED----------GYLTVTDRLKSLIVLSTGKNVA 473
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
P +E A + + I Q VV+G+ ++ A++VPD
Sbjct: 474 PQPIESALVTAPHISQAVVVGEGRKYVSALVVPD 507
>gi|385809651|ref|YP_005846047.1| Long-chain acyl-CoA synthetase [Ignavibacterium album JCM 16511]
gi|383801699|gb|AFH48779.1| Long-chain acyl-CoA synthetase [Ignavibacterium album JCM 16511]
Length = 611
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 189/408 (46%), Gaps = 53/408 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
+R+ + P D FLS LP H++ER GY+ F+ G + Y ++ + DL +
Sbjct: 215 NVRAALECFPINKDDIFLSFLPLCHIFERMAGYYTAFASGGTICYAESIETVAQDLIAVK 274
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M +VP ++E +YS I K + + ++ + I Y + K+ +
Sbjct: 275 PTIMTTVPRLFERIYSRIIKNVESQPEKKQKIFHWAIETGKEYASAKKKGK--------- 325
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ L H +A+KLV+KK++ G + +SGG +L +
Sbjct: 326 ----------------VSIPLAAKHKVADKLVFKKLRERTGGRLRFFISGGAALSKDLGE 369
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+EA+G+ + GYGLTESSPVIAA R G+VG P E+KI A E+L
Sbjct: 370 FFEAVGILIIEGYGLTESSPVIAANRVDDYKFGTVGKPFPGVEVKI--APDGEIL----- 422
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
+G +MQGY+KN T +A DGWL+TGDIG G L + R
Sbjct: 423 ----AKGPNIMQGYYKNKKET-EATIVDGWLHTGDIGEFDAE----------GFLKITDR 467
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K S G+ + P +E L S I Q V+IG + A+IVPD E + A
Sbjct: 468 KKHLFKTSAGKYIAPTPIENLFLASKYIDQFVLIGDRRMFLTALIVPDFEALKEYADSNK 527
Query: 416 IVHADASELSKEKTI-SLLYGELRKWTSKCSF--QIGPIHVVDEPFTV 460
I + +L ++ I LL EL + + + ++ ++D+PF++
Sbjct: 528 IPYTKVDDLVRDDRIYKLLESELNQMQRQLANYERVRKFALLDKPFSI 575
>gi|345304087|ref|YP_004825989.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
gi|345113320|gb|AEN74152.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
Length = 633
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 197/414 (47%), Gaps = 55/414 (13%)
Query: 65 DIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMIS 122
D PA D LS LP H +ER GY + + G + Y ++ L +L +P MIS
Sbjct: 223 DFGPA---DHHLSFLPLCHSFERTAGYTAVLACGARISYAESIEALSQNLLEVRPTVMIS 279
Query: 123 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 182
VP ++E +Y+ I K + S + ++ + + + A +
Sbjct: 280 VPRLFERVYNAIHKSVEKSPSLQQKIFHWAVGVGRRMAACR------------------- 320
Query: 183 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 241
L R +L H LA +LV++K+ +G + + VSGG +LP HI F+ AIG
Sbjct: 321 -----LEGRTPGPVLQLQHRLAHRLVFQKLHDRLGGNLRFAVSGGAALPRHIGEFFLAIG 375
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI--------NHTEIKIVDAETNEVLPAG 293
+ + GYGLTE++PV+ P G+VG + T+ KIV + + P+
Sbjct: 376 LTIIEGYGLTETAPVLTVNPPDRPRFGTVGWVLPGVTIAIQRLTDGKIVGQLSGDDYPSD 435
Query: 294 ---SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 350
+G + V+G VM+GY+ N AT++ D DGW +TGD+G R G L
Sbjct: 436 LTTEEGEILVKGPNVMKGYWNNEEATREVFDADGWFHTGDVG-----------RFDQGYL 484
Query: 351 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 410
V+ R K IV G+N+ P +E+ + I QIVVIG+ + A+IVPD E +
Sbjct: 485 VITDRIKHMIVSRGGKNIYPGPIEDQLKQEPWIDQIVVIGEGREFLTALIVPDFEALRQY 544
Query: 411 AKRLSIVHA-DASELSKEKTISLLYGELRKWT--SKCSFQIGPIHVVDEPFTVN 461
A+ ++ A D + L+ + +L LR++ + +I ++ EPFT+
Sbjct: 545 AQEHNLQAASDEALLALPEIRALFEQSLRRYNRHAPAHERIRAFRLLSEPFTIE 598
>gi|268316194|ref|YP_003289913.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
gi|262333728|gb|ACY47525.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
Length = 633
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 197/414 (47%), Gaps = 55/414 (13%)
Query: 65 DIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMIS 122
D PA D LS LP H +ER GY + + G + Y ++ L +L +P MIS
Sbjct: 223 DFGPA---DHHLSFLPLCHSFERTAGYTAVLACGARISYAESIEALSQNLLEVRPTVMIS 279
Query: 123 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 182
VP ++E +Y+ I K + S + ++ + + + A +
Sbjct: 280 VPRLFERVYNAIHKSVEKSPSLQQKIFHWAVGVGRRMAACR------------------- 320
Query: 183 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 241
L R +L H LA +LV++K+ +G + + VSGG +LP HI F+ AIG
Sbjct: 321 -----LEGRTPGPVLQLQHRLAHRLVFQKLHDRLGGNLRFAVSGGAALPRHIGEFFLAIG 375
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI--------NHTEIKIVDAETNEVLPAG 293
+ + GYGLTE++PV+ P G+VG + T+ KIV + + P+
Sbjct: 376 LTIIEGYGLTETAPVLTVNPPDRPRFGTVGWVLPGVTIAIQRLTDGKIVGQLSGDDYPSD 435
Query: 294 ---SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 350
+G + V+G VM+GY+ N AT++ D DGW +TGD+G R G L
Sbjct: 436 LTTEEGEILVKGPNVMKGYWNNEEATREVFDADGWFHTGDVG-----------RFDRGYL 484
Query: 351 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 410
V+ R K IV G+N+ P +E+ + I QIVVIG+ + A+IVPD E +
Sbjct: 485 VITDRIKHMIVSRGGKNIYPGPIEDQLKQEPWIDQIVVIGEGREFLTALIVPDFEALRQY 544
Query: 411 AKRLSIVHA-DASELSKEKTISLLYGELRKWT--SKCSFQIGPIHVVDEPFTVN 461
A+ ++ A D + L+ + +L LR++ + +I ++ EPFT+
Sbjct: 545 AQEHNLQAASDEALLALPEIRALFEQSLRRYNRHAPAHERIRAFRLLSEPFTIE 598
>gi|402831321|ref|ZP_10880009.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
gi|402282505|gb|EJU31045.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
Length = 597
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 211/447 (47%), Gaps = 65/447 (14%)
Query: 30 FFSRRDLPLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHV 84
F SR L++ + T P M ++ Q + D + G+ +S LP HV
Sbjct: 173 FDSRCMQDLYTIIYTSGTTGNPKGVMIDYENVAYQFINHDDRLAVVEGNVSMSFLPLSHV 232
Query: 85 YERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 143
YER ++F +G+ Y N + + L+ +PHYM VP + E +Y+ I + + S
Sbjct: 233 YERMWVAYVFHKGVINCYLDDTNRVAEALKEVKPHYMCVVPRLLEKIYTKIYENVQKQSV 292
Query: 144 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 203
+RVV RI+ +I G T+ K PS+ IL L+ L
Sbjct: 293 VKRVVFATATRIA-------KIQLG--RTKKGKYPSF---------------ILKKLYNL 328
Query: 204 AEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 262
A+KLV++K+++A+G + + GG+L I F+ AIGV V +GYG+TE++ ++
Sbjct: 329 ADKLVFQKLKAALGGNIQMIPCGGALLEPSIGRFFRAIGVNVTLGYGMTETTATVSCWDD 388
Query: 263 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 322
L SVG + + + KI + NE+L ++G + +GY+ NP +A E
Sbjct: 389 HKFKLKSVGTLVPYVQAKI--GQDNEIL---------LKGGSISKGYYNNPEENAKAFTE 437
Query: 323 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 382
DG+L TGD G++ G L + R K+ + S G+ + P ++E + S
Sbjct: 438 DGYLRTGDAGYLDKE----------GNLYITERIKELMKTSNGKYIAPQQIEGKVGKDSF 487
Query: 383 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLY 434
I QI VI ++ A+IVP+ E + AK L++ + + SEL K +K + L
Sbjct: 488 IEQIAVIADARKYVSALIVPNYEALAEYAKSLNLKYKNYSELIKNSQIVEFFQKRLQHLQ 547
Query: 435 GELRKWTSKCSFQIGPIHVVDEPFTVN 461
EL + QI ++ PF++N
Sbjct: 548 QELAAYE-----QIKKFTLLTTPFSIN 569
>gi|448607753|ref|ZP_21659706.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
gi|445737690|gb|ELZ89222.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
Length = 668
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 165/336 (49%), Gaps = 48/336 (14%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ F+ G + Y + L++D Q +P SVP VYE LY
Sbjct: 262 LSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLARPTVGTSVPRVYEKLYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ Q S A +RV A + + AY P YL
Sbjct: 322 IRTQASESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL------------ 355
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
L H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 356 ---LTAKHRLADRLVFGQVREALGDNIDFFISGGGSLSAELCALYHAMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
+SPVI+ P +G++G+P+ E K+ + L G G + VRG V +GY+
Sbjct: 413 TSPVISVNPPEEPKIGTIGYPLRTVETKLDATVVGDRLGDAGGEVGELLVRGPSVTEGYW 472
Query: 311 KNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+P T+ A ED W TGD+ RR G + RAK +VLSTG+
Sbjct: 473 NDPEETEAAFVEDDEAERWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGK 522
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 523 NVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|119357321|ref|YP_911965.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
DSM 266]
gi|119354670|gb|ABL65541.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
DSM 266]
Length = 610
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 196/408 (48%), Gaps = 52/408 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQ 116
++S ++ + D+ LS LP H YER GY++ FS G + + +V + ++ +
Sbjct: 211 NVKSCSTVIRLDETDRSLSFLPLSHAYERTGGYYLLFSCGAAIYLAESVETVSLNIAEAR 270
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + +VP +++ + + KQI SA ++ + + E F N K
Sbjct: 271 PTIIFTVPRLFDRIKANTLKQIGNESAIKQKIFFWALHTG----------EEFHRQMNAK 320
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ L + H LA+KLVY KI+ G + VSGG +LP +
Sbjct: 321 GKAALAVSMQ--------------HSLADKLVYAKIRKKFGGKLRYFVSGGAALPQKVGE 366
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F++A+ + + GYGLTE+SPV RP LG+VG +N+ +I+I D
Sbjct: 367 FFQALSINILEGYGLTETSPVTNVNRPEKIKLGTVGPAVNNVQIRIAD-----------D 415
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G + ++G +M+GY+++ AT++ + +DGW +GDIG I G L + R
Sbjct: 416 GEILMKGPNIMKGYWQDEDATREVI-KDGWFYSGDIGEIDRD----------GYLKITDR 464
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K IV S G+N+ P +E S + Q++VIG+ + A+IVPD +++ AK S
Sbjct: 465 KKHIIVTSGGKNIAPQPIENLISESPYVDQVIVIGEKRPFLIALIVPDFSKLMEYAKENS 524
Query: 416 IVHADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 460
I L + K I +Y +L + S+ ++ +VDE F++
Sbjct: 525 ISATTNKALIENKNIQQIYEKLMRTISRQLATHEKVRKFLLVDEAFSI 572
>gi|313672314|ref|YP_004050425.1| amp-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939070|gb|ADR18262.1| AMP-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 606
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 176/365 (48%), Gaps = 50/365 (13%)
Query: 75 FLSMLPPWHVYERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP HV ER+ GY+I G E+++ + + ++ P MISVP ++E +YS
Sbjct: 227 FLSFLPLSHVLERSVGYYIPVYNGCEIVFAENIDKVAQNILEVNPTMMISVPRLFEKIYS 286
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I + + + + ++ + I Y K YE +K L L
Sbjct: 287 RIYENVHSMPSFKKSLFHKAIEFGRWYVHKK--YE-------EKNVDTLSEL-------- 329
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
+ +KL++ KI+ G G VSGG L +I+ F+ AIG+ V GYGLT
Sbjct: 330 -------KYKFYDKLIFSKIRERFGNRFKGFVSGGAPLDKNINEFFWAIGIPVYEGYGLT 382
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E+SP I P+ +GSVG P TE KI AE E+L VRG VM+GY+K
Sbjct: 383 ETSPGICINCPSHVRIGSVGTPFEETEFKI--AEDGEIL---------VRGPMVMKGYYK 431
Query: 312 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 371
N TK+A + D W TGDIG I R G + +++ R K+ IV S G+N+ P
Sbjct: 432 NEETTKEAFEGD-WFKTGDIGEI----------RDGYIYIVD-RKKELIVTSGGKNISPQ 479
Query: 372 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 431
+E I Q V G + A++VP+ E +L AK I + D S+L+K +
Sbjct: 480 HIENELKLDKYISQAYVHGDRKPYLVALLVPNMERLLEFAKEKGIDYLDISDLAKNPEVI 539
Query: 432 LLYGE 436
LY E
Sbjct: 540 KLYNE 544
>gi|335043086|ref|ZP_08536113.1| long-chain acyl-CoA synthetase [Methylophaga aminisulfidivorans MP]
gi|333789700|gb|EGL55582.1| long-chain acyl-CoA synthetase [Methylophaga aminisulfidivorans MP]
Length = 601
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 173/357 (48%), Gaps = 63/357 (17%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFI---------FSRGIELMYTAVRNLKDDLQRYQPHYM 120
++ D FLS LP H ER GY++ FSRGI L +D+Q+ QP +
Sbjct: 222 QSNDLFLSFLPLSHTLERTAGYYLPMMTGSKVAFSRGIP-------QLANDIQQLQPSAL 274
Query: 121 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 180
I+VP ++E +Y + + + +R + +I ++Y + + R P +
Sbjct: 275 IAVPRIFERIYQRLHTNVSSQPWYKRFLFLLTHKIGWSYFLYNQ-------QRRHWSPIF 327
Query: 181 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 239
L+ + +KLV K +Q+ G + V+GG ++P H+ +
Sbjct: 328 LLMPV------------------LDKLVAKNVQALFGGQLRVAVTGGAAIPHHVAEIFIG 369
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
+G+ + GYGLTE+SPVI+ N SVGHPI +IKI AE +E+L
Sbjct: 370 MGINLLQGYGLTETSPVISVNTLGDNQPYSVGHPIPTVKIKI--AENSELL--------- 418
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
V+ M GY+ N AT + +D DGWL+TGD I+ G + + GR KD
Sbjct: 419 VQSPGNMLGYWNNHKATAKTIDSDGWLHTGDQAEISD----------TGHIFITGRIKDI 468
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
+VLS GE V P ++E A L Q +++G+ + A+IV + E+ L+ A++L +
Sbjct: 469 LVLSNGEKVSPADMEMAITSDELFEQALIVGEGKPFLSALIVLNAEQWLVLAQKLKL 525
>gi|374586879|ref|ZP_09659971.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875740|gb|EHQ07734.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 656
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 180/368 (48%), Gaps = 30/368 (8%)
Query: 67 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 126
P D+ + LPPWH+ ER + + G + +++ +L DLQ +P ++SVP V
Sbjct: 237 TPLNEKDRAVIFLPPWHIAERVLELTLIACGASMANSSILHLAGDLQTIRPTLLVSVPRV 296
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRIS-FAYTAFKRIYEGFCLTRNQKQPSYLVALI 185
+E LY I + ++ + + ++ A +++ L ++ P+
Sbjct: 297 WEQLYKRIMDGVRKQPEEKQKIFHMAVNVAGLHMDALDNLFDRIALI-EEETPAQT---- 351
Query: 186 DWLWARIICAIL----WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
W+ I A+L W L+L A+ +V KK++ G +SG G+LP HI F+ ++
Sbjct: 352 -WIRKGISVAVLLVTFW-LNLPAQ-IVLKKVKDIFGGRLNYAISGAGALPGHIADFFRSV 408
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
+ + YG+TE++ V R VG P+ I++ D + G +G+
Sbjct: 409 YIPIVDAYGMTETTAVSVMGRLPWPRRACVGPPLPGVHIQLRDEYGRIITRPGERGVAWH 468
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDI-GWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+G +M+GY++ T + L +DGWLN+GD+ W G + GRAKDT
Sbjct: 469 KGPHIMKGYYRAQDKTDEVL-QDGWLNSGDLFAWTTT-----------GEIRFTGRAKDT 516
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
IVL+ GENVEP +E S I Q+VV+GQD++ A+IVP K+ V A+ L+ V
Sbjct: 517 IVLAGGENVEPGPIELRLAASPYIAQVVVVGQDRKSLAALIVPHKDRV---AEELTKVGH 573
Query: 420 DASELSKE 427
A E E
Sbjct: 574 TAPEAMTE 581
>gi|448725783|ref|ZP_21708221.1| AMP-dependent synthetase and ligase [Halococcus morrhuae DSM 1307]
gi|445797647|gb|EMA48109.1| AMP-dependent synthetase and ligase [Halococcus morrhuae DSM 1307]
Length = 653
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 184/374 (49%), Gaps = 59/374 (15%)
Query: 76 LSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G +F+F+ G + Y + + +D+Q QP SVP +YE ++
Sbjct: 263 LSFLPLAHVFERLAGHFFLFASGATVAYAESADTVAEDIQTVQPTTATSVPRIYERIFDS 322
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
+++ S+ RR+ RA+ A KR T Q P + R+
Sbjct: 323 MREDA-DSAIKRRIFERAV-------AAAKR-------TSRQDDPGRTL--------RVE 359
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
A LA++LVY ++ A+G + + +SGGGSL + ++ +G+ + GYGLTE
Sbjct: 360 RA-------LADRLVYSTVKEAMGGNIEFFISGGGSLSPELARLFDGMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------GSKGIVKVRGSQVM 306
++PV++ P G++G + E K+ DA VLPA G+ G + VRG V
Sbjct: 413 AAPVVSVNPPEAPKPGTLGPALTGVETKL-DAS---VLPADQYDRDGTVGELLVRGPNVT 468
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY++NP T A ++DGWL TGDI R G V R K +VL+TG+
Sbjct: 469 DGYWENPEETDAAFEDDGWLRTGDI----------VERDGDGYFVYHERLKQLLVLTTGK 518
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
NV P +E++ S + Q +V+G D++ A++VP+ E + A R +I EL
Sbjct: 519 NVAPGPIEDSFATSERVEQAMVLGDDEKFVSALVVPNFEGLRAWAARKNI------ELPS 572
Query: 427 EKTISLLYGELRKW 440
E+ R+W
Sbjct: 573 ERAALCRDENAREW 586
>gi|448570160|ref|ZP_21639154.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
gi|445723461|gb|ELZ75103.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
Length = 666
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 165/336 (49%), Gaps = 48/336 (14%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ F+ G + Y + L++D Q +P SVP VYE LY
Sbjct: 262 LSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ Q S A +RV A + + AY P YL
Sbjct: 322 IRAQASESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL------------ 355
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
L H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 356 ---LTAKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
+SPV++ P + ++G+P+ + E K+ + L G G + VRG V +GY+
Sbjct: 413 TSPVVSVNPPEAPKISTIGYPLRNVETKLDTTVVGDQLGEAGGEVGELLVRGPSVTEGYW 472
Query: 311 KNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+P T+ A ED W TGD+ RR G + RAK +VLSTG+
Sbjct: 473 NDPEETEAAFVEDDEGRRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGK 522
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 523 NVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|429191225|ref|YP_007176903.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
gi|429135443|gb|AFZ72454.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
Length = 660
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 176/360 (48%), Gaps = 47/360 (13%)
Query: 71 NGD-KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVY 127
+GD K +S LP HV+ER G+F+ F+ G + Y + LK+D QP SVP VY
Sbjct: 261 DGDSKMVSYLPLAHVFERTAGHFLPFAAGATVAYAESSETLKEDFGTVQPTGATSVPRVY 320
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E +Y I++Q S+ R+ A TA R Y+
Sbjct: 321 EKIYDAIREQATESAVKERIFNWA--------TAVGRKYQ-------------------- 352
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
A IL +A+KLV+ +++ A+G + + VSGGG+L + Y +G+ +
Sbjct: 353 -RADDPGPILEAELSIADKLVFSQVKEALGGNIELLVSGGGTLSSDLCTLYHGMGLPIYE 411
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVKVRGS 303
GYGLTE++PV+ P +G+VG P+ E+ + D+ + G G + V+G
Sbjct: 412 GYGLTETAPVVTTNPPEEPKIGTVGPPVVDCEVTVDDSVVPDGETANTEGETGELLVKGP 471
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
V +GY++ P AT +A EDGW TGDI I P + R K +VLS
Sbjct: 472 NVAEGYWEKPEATDRAF-EDGWFRTGDIVTIRPDD----------YIEFHERRKQLLVLS 520
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
TG+NV P +E+A L+ Q +V+G ++ GA+IVP+ + + A+ I D+++
Sbjct: 521 TGKNVAPAPIEDAFAARELVEQCLVVGDGEKFVGALIVPNVDALRRRAEDEGIDLPDSAQ 580
>gi|448323702|ref|ZP_21513155.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
gi|445620838|gb|ELY74325.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
Length = 655
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 176/360 (48%), Gaps = 47/360 (13%)
Query: 71 NGD-KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVY 127
+GD K +S LP HV+ER G+F+ F+ G + Y + LK+D QP SVP VY
Sbjct: 256 DGDSKMVSYLPLAHVFERTAGHFLPFAAGATVAYAESSETLKEDFGTVQPTGATSVPRVY 315
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E +Y I++Q S+ R+ A TA R Y+
Sbjct: 316 EKIYDAIREQATESAVKERIFNWA--------TAVGRKYQ-------------------- 347
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
A IL +A+KLV+ +++ A+G + + VSGGG+L + Y +G+ +
Sbjct: 348 -RADDPGPILEAELSIADKLVFSQVKEALGGNIELLVSGGGTLSSDLCTLYHGMGLPIYE 406
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVKVRGS 303
GYGLTE++PV+ P +G+VG P+ E+ + D+ + G G + V+G
Sbjct: 407 GYGLTETAPVVTTNPPEEPKIGTVGPPVVDCEVTVDDSVVPDGETANTEGETGELLVKGP 466
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
V +GY++ P AT +A EDGW TGDI I P + R K +VLS
Sbjct: 467 NVAEGYWEKPEATDRAF-EDGWFRTGDIVTIRPDD----------YIEFHERRKQLLVLS 515
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
TG+NV P +E+A L+ Q +V+G ++ GA+IVP+ + + A+ I D+++
Sbjct: 516 TGKNVAPAPIEDAFAARELVEQCLVVGDGEKFVGALIVPNVDALRRRAEDEGIDLPDSAQ 575
>gi|194336560|ref|YP_002018354.1| AMP-dependent synthetase and ligase [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309037|gb|ACF43737.1| AMP-dependent synthetase and ligase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 610
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 193/388 (49%), Gaps = 49/388 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGIEL-MYTAVRNLKDDLQRYQ 116
++S I+ + D LS LP H YER GY+ IFS G + + ++ + ++ +
Sbjct: 211 NVKSCSSIMRLDESDCSLSFLPLSHAYERTGGYYLIFSCGAAIYLAESIETISLNMSEAR 270
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + +VP +++ + GI KQI + SA I+ Y A K E + N+K
Sbjct: 271 PTIIFTVPRLFDRIKMGILKQISSQSA---------IKQKIFYWALK-TGEKYHQEINEK 320
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ +L H LAEKLVYKKI++ G + VSGG +LP I
Sbjct: 321 G--------------VAGKLLSAKHALAEKLVYKKIKNKFGGRLRYFVSGGAALPQKIGE 366
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F++A+ + + G+GLTE+SPV RP G+VG + + ++ I AE E+L
Sbjct: 367 FFQALDISILEGFGLTETSPVTHVNRPEKIKYGTVGPAVENVQVMI--AEDGEIL----- 419
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
++G +M+GY+ + +AT++ + DGW +TGDIG I G L + R
Sbjct: 420 ----LKGPNIMKGYWNDEAATREVI-RDGWFHTGDIGVIDRD----------GYLKITDR 464
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K IV S G+N+ P+ +E SS + Q++VIG+ + A+IVP+ ++ A
Sbjct: 465 KKHIIVTSGGKNIAPMPIENLISDSSYVDQVIVIGEKRPFLIALIVPEFNKLKEFAAAEG 524
Query: 416 IVHADASELSKEKTISLLYGELRKWTSK 443
I A EL + K++ ++ +L + S+
Sbjct: 525 IQAASNKELIENKSVQQIFEKLLRTVSR 552
>gi|389847450|ref|YP_006349689.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|448617228|ref|ZP_21665883.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|388244756|gb|AFK19702.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|445748577|gb|EMA00024.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
Length = 667
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 164/336 (48%), Gaps = 48/336 (14%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV ER G+F+ F+ G + Y + L++D Q QP SVP VYE LY
Sbjct: 262 LSFLPLAHVLERMAGHFMMFAAGATVAYAESPDTLREDFQLVQPTAGTSVPRVYEKLYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ Q S +R+ A + + Y P YL++
Sbjct: 322 IRAQASESPVKKRIFEWA-VDVGQEY-------------HTTDSPGYLLSA--------- 358
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
H +A++LV+ +++ A+G + + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 359 ------KHRVADRLVFDQVREALGGNIEFFISGGGSLSAELCALYHAMGLPIFEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
+SPVI P +G++G+P+ EIK+ + L G G + VRG V GY+
Sbjct: 413 TSPVITVNPPEAPKIGTIGYPLREVEIKLDKTVVGDQLGDAGGEVGELLVRGPNVTPGYW 472
Query: 311 KNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
P T++A ED W TGD+ RR G + RAK +VLSTG+
Sbjct: 473 NRPEETEEAFVEDDEGNRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGK 522
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
NV P +E+A S+++ Q +V+G ++ A+IVP
Sbjct: 523 NVPPGPIEDAFASSTVVEQCMVLGDGRKFISALIVP 558
>gi|448620307|ref|ZP_21667655.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
gi|445757095|gb|EMA08451.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
Length = 668
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 166/336 (49%), Gaps = 48/336 (14%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ F+ G + Y + L++D Q +P SVP VYE LY
Sbjct: 262 LSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLARPTVGTSVPRVYEKLYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ Q S A +RV A + + AY P YL++
Sbjct: 322 IRTQASESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYLLSA--------- 358
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 359 ------KHRLADRLVFGQVREALGDNIDFFISGGGSLSAELCALYHAMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
+SPVI+ P +G++G+P+ E ++ + L G G + VRG V +GY+
Sbjct: 413 TSPVISVNPPEEPKIGTIGYPLRTVETELDATVVGDRLGDAGGEVGELLVRGPSVTEGYW 472
Query: 311 KNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+P T+ A ED W TGD+ RR G + RAK +VLSTG+
Sbjct: 473 NDPEETEAAFVEDDEGERWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGK 522
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 523 NVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|448711888|ref|ZP_21701431.1| AMP-dependent synthetase and ligase [Halobiforma nitratireducens
JCM 10879]
gi|445790973|gb|EMA41622.1| AMP-dependent synthetase and ligase [Halobiforma nitratireducens
JCM 10879]
Length = 656
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 175/363 (48%), Gaps = 46/363 (12%)
Query: 67 VPAENGD-KFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISV 123
P +GD + +S LP HV+ER G+F+ F+ G + Y + LK+D QP SV
Sbjct: 252 TPTIDGDSRMVSYLPLAHVFERTAGHFLPFAAGATVAYAESSDTLKEDFSAVQPTGATSV 311
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P VYE +Y I++Q S R+ A T R Y+
Sbjct: 312 PRVYEKIYDAIREQATESPIKERIFNWA--------TDVGRAYQ---------------- 347
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
A IL +A+KLV+ +++ A+G + + VSGGG+L + Y +G+
Sbjct: 348 -----RADDPGPILEAKLSIADKLVFGQVKDALGGNIEMLVSGGGTLSPDLCTLYHGMGL 402
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVK 299
+ GYGLTE++PV+ P +G+VG P+ E+++ D+ + AG G +
Sbjct: 403 PIFEGYGLTETAPVVTTNPPERPQIGTVGPPVVGCEVRVDDSVVPDGEAADTAGETGELL 462
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
VRG V +GY++ P AT +A DGW TGDI I P +V R K
Sbjct: 463 VRGPNVAEGYWEKPGATDRAFTADGWFRTGDIVTIRPDD----------YIVFHERRKQL 512
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
+VLSTG+NV P +E++ + Q +V+G ++ GA+IVP+ + + A+ I
Sbjct: 513 LVLSTGKNVAPAPIEDSFAAREPVEQCMVVGDGEKFVGALIVPNVDALRRLAEDEGIDLP 572
Query: 420 DAS 422
D++
Sbjct: 573 DSA 575
>gi|433592776|ref|YP_007282272.1| AMP-forming long-chain acyl-CoA synthetase [Natrinema pellirubrum
DSM 15624]
gi|448335221|ref|ZP_21524371.1| AMP-dependent synthetase and ligase [Natrinema pellirubrum DSM
15624]
gi|433307556|gb|AGB33368.1| AMP-forming long-chain acyl-CoA synthetase [Natrinema pellirubrum
DSM 15624]
gi|445617602|gb|ELY71196.1| AMP-dependent synthetase and ligase [Natrinema pellirubrum DSM
15624]
Length = 652
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 169/342 (49%), Gaps = 49/342 (14%)
Query: 76 LSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
+S LP HV+ER G+F +F+ G + Y + L++D QP SVP VYE +Y G
Sbjct: 262 MSYLPLAHVFERTAGHFALFAGGTCIAYAESPDTLQEDFSTVQPTTATSVPRVYEKIYDG 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+++ SS +RR+ A + AY A
Sbjct: 322 IREEASGSSVSRRIFEWA-TDVGVAYQQ----------------------------AASP 352
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
IL LA+KLV+ ++ A+G + + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 353 GPILKAKQALADKLVFSTVREALGGNIEILISGGGSLSPELCRLYHAMGLPIFEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVD---AETNEVLPAGSKGIVKVRGSQVMQGY 309
+SP++A P +G++G +++ E+K+ + + AG G + V G V QGY
Sbjct: 413 TSPIVATNPPEGAKIGTIGPTLSNVEVKVDEAIADQDAFADDAGEVGELLVNGPNVTQGY 472
Query: 310 FKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
+ P AT+ A D+DG W TGDI + P G L R K IVLSTG
Sbjct: 473 WNKPGATEGAFTEDDDGTRWFRTGDIIHVRPD----------GYLEFRDRVKQIIVLSTG 522
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
+NV P LE+A S ++ Q +V+G ++ GA++VP+ V
Sbjct: 523 KNVAPGPLEDAFAASEVVEQAMVVGDGEKFIGALLVPNTNHV 564
>gi|189346901|ref|YP_001943430.1| AMP-dependent synthetase and ligase [Chlorobium limicola DSM 245]
gi|189341048|gb|ACD90451.1| AMP-dependent synthetase and ligase [Chlorobium limicola DSM 245]
Length = 610
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 193/388 (49%), Gaps = 49/388 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQ 116
++S ++ + D LS LP H YER GY++ F+ G + + ++ + ++ +
Sbjct: 211 NVKSCSSVIRLDETDCSLSFLPLSHAYERTGGYYLLFACGAAIYLAESIETISLNIAEAK 270
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + +VP +++ + + + KQI + SA ++ + ++ E + N+K
Sbjct: 271 PTIIFTVPRLFDRMKANMLKQISSESAIKQKIFNWAVKTG----------EQYHRQVNEK 320
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ + I H LA+KLVY KI+ G + VSGG +LP I
Sbjct: 321 NRASITLSIQ--------------HNLADKLVYHKIRKKFGGRLRYFVSGGAALPQKIGE 366
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F++A+G+ + G+GLTE+SPV RP G+VG + + ++KI AE E+L
Sbjct: 367 FFQALGINILEGFGLTETSPVTNVNRPDKIKFGTVGPAVKNVQVKI--AEDGEIL----- 419
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
++G +M+GY+++ +ATK+ + DGW +GDIG I G L + R
Sbjct: 420 ----LKGPNIMKGYWQDETATKEVI-RDGWFYSGDIGEIDRD----------GYLKITDR 464
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K IV S G+N+ P +E + S+ + Q++VIG+ + A+IVPD ++ A + S
Sbjct: 465 KKHIIVTSGGKNIAPQPIENLIIESAFVDQVIVIGEKRPFLIAVIVPDFVKLNEYAAQNS 524
Query: 416 IVHADASELSKEKTISLLYGELRKWTSK 443
I EL + K I +Y +L + S+
Sbjct: 525 ISAKTNKELIENKAIQQIYEKLMRNISR 552
>gi|289207858|ref|YP_003459924.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sp. K90mix]
gi|288943489|gb|ADC71188.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sp. K90mix]
Length = 602
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 192/400 (48%), Gaps = 54/400 (13%)
Query: 68 PAENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPL 125
P D+FLS LP H+ ER G Y G E+ + +++ L +DL +P +ISVP
Sbjct: 218 PLSPADRFLSFLPLSHMLERTAGLYMPMLIGAEVAFARSIQALGEDLVNVRPTVLISVPR 277
Query: 126 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 185
+YE ++ IQ + S R + +A + I + ++ G+ P +L
Sbjct: 278 IYERVHGRIQAGLKQKSGLGRALFKATVSIGWKRFEHQQGRGGWS-------PGFL---- 326
Query: 186 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 244
LWP+ E++V +K+ +G + V GG LP I F+ +G+ V
Sbjct: 327 -----------LWPV---LERIVARKVLDRLGGELRFAVCGGAPLPPPIAQFFIGLGLPV 372
Query: 245 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 304
GYG+TE+SPV+ P N+ S+G P+ EI+I E +E+L R
Sbjct: 373 LHGYGMTEASPVVTVNTPDDNLPASIGKPLPGVEIRI--GEMDELL---------TRSPC 421
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
VM GY+KN AT++ +DEDGWL++GD + R G V + GR KD +VL+
Sbjct: 422 VMLGYWKNEEATRETIDEDGWLHSGD---------QARIDDSGHVFIT-GRIKDILVLTN 471
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 424
GE V P ++E A +L Q++++G ++ A++VP+ E A + L
Sbjct: 472 GEKVPPADMEMAIALDALFDQVMIVGDNRSFLTALVVPEPEAWASFASDHDLDAETEGRL 531
Query: 425 SKEKTISLLYG---ELRKWTSKCSFQIGPIHVVDEPFTVN 461
++ +LL +LR + +I +HV E ++V+
Sbjct: 532 PRKAERALLQRIQYQLRDFPGYA--KIRHVHVTHEAWSVD 569
>gi|448584787|ref|ZP_21647530.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
gi|445727641|gb|ELZ79251.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
Length = 666
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 163/336 (48%), Gaps = 48/336 (14%)
Query: 76 LSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ + + L++D Q +P SVP VYE LY
Sbjct: 262 LSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLVRPTTGTSVPRVYEKLYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ Q S A +R+ A + + AY P YL
Sbjct: 322 IRAQASESPAKKRIFEWA-VGVGQAY-------------HTTDAPGYL------------ 355
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
L H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 356 ---LTAKHRLADRLVFGQVREALGDNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
+SPVI+ P +G++G+P+ + E K+ + L G G + VRGS V +GY+
Sbjct: 413 TSPVISVNPPEEPKIGTIGYPLRNVETKLDTTVVGDQLGDAGGEVGELLVRGSSVTEGYW 472
Query: 311 KNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
NP T+ A ED W TGD+ + P G + RAK +VLSTG+
Sbjct: 473 NNPEETEAAFVEDDEGERWFRTGDVVELRPD----------GYITFRERAKQILVLSTGK 522
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 523 NVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|398345391|ref|ZP_10530094.1| long-chain-fatty-acid--CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 645
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 184/389 (47%), Gaps = 24/389 (6%)
Query: 57 NFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 116
+ ++ L VP D+ + LPPWH+ ER + S G + + V NL+ D Q
Sbjct: 220 TWSVQELQQFVPVTYSDRTVVFLPPWHIAERILETALLSWGASMASSNVTNLQRDFGLIQ 279
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS-FAYTAFKRIYEGFCLTRNQ 175
P ++SVP V+E LY I + + V ++I+ F + + I + T ++
Sbjct: 280 PTVLVSVPRVWEALYRKIWDTAKKGPSWKFKVFSLAVKIAEFHSSLYDTITGNYATTEDE 339
Query: 176 KQPSYLVALIDWLWARIICAILWPL---HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH 232
PS AL + + A P+ +LL++K++ S G + G G++P
Sbjct: 340 --PSDQKALDKF----VALAFFGPVSLANLLSQKILQPVRASLGGRLRFAFCGAGAMPSK 393
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
I F+ ++G+ + YG+TE++ + A R G++G IK++D + +
Sbjct: 394 IQFFFRSLGIPIIETYGMTETTGMGAMGRFPIPKTGAIGPVFPGAHIKLLDETGTVITES 453
Query: 293 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLV 351
G KG +G V GY+K+ +L D W ++GD+ W G L
Sbjct: 454 GIKGTAWHKGPHVTSGYYKDEEKNTASLI-DNWFDSGDLFVWTKT-----------GELK 501
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA- 410
GRAKDTIVLS+GENVEP +E S I+ IVV+GQD++ A+IVP+ E++
Sbjct: 502 FAGRAKDTIVLSSGENVEPEPIEAKISESEFIQFIVVVGQDRKFLNALIVPNFEKLREKF 561
Query: 411 AKRLSIVHADASELSKEKTISLLYGELRK 439
AK + +E+ T+ Y EL K
Sbjct: 562 AKSGQTLPEANTEIVTNPTVLKFYKELLK 590
>gi|291279849|ref|YP_003496684.1| long-chain fatty-acid-CoA ligase [Deferribacter desulfuricans SSM1]
gi|290754551|dbj|BAI80928.1| long-chain fatty-acid-CoA ligase [Deferribacter desulfuricans SSM1]
Length = 610
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 183/390 (46%), Gaps = 56/390 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
DKFLS LP H ERA GY+I G ++++ ++ + +++ +P +M+SVP ++E +
Sbjct: 224 DKFLSFLPLSHALERAVGYYIPIYNGCQMVFAESIDKVPENMVEVKPTWMVSVPRLFEKM 283
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
YS I + + S ++ + + + Y K I + N S+ A D
Sbjct: 284 YSRIYENVHAMSGFKKSLFHKAVEVGKKYVEKKYIKK-----ENPGMLSFKYAFFD---- 334
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYG 249
KL++ KI+ G + G VSGG L +I+ F+ IG+ + GYG
Sbjct: 335 ---------------KLIFSKIRERFGGNIQGFVSGGAPLDKNINEFFWVIGMPIFEGYG 379
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+SP + GSVG HT K+ E E+L ++G +M+GY
Sbjct: 380 LTETSPGVCINTFKQVRFGSVGTMFEHTYAKL--DEDGELL---------LKGPMIMKGY 428
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+KN ATK+ALDE+GW TGDIG I G L + R K+ I+ + G+N+
Sbjct: 429 YKNEEATKEALDEEGWFRTGDIGKIDED----------GFLYIVDRKKELIITAGGKNIA 478
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 429
P +E I Q V G + A++VP+ E ++ AK I + D ++L +
Sbjct: 479 PQPIENELKLDKYISQAFVYGDRKPYLVALLVPNFERIVEYAKEHHIEYFDMNDLVANEK 538
Query: 430 ISLLYGE--------LRKWTSKCSFQIGPI 451
I L+ E L K+ + F + P+
Sbjct: 539 ILKLFKERVEEINKKLPKYETIKKFSLVPV 568
>gi|193215784|ref|YP_001996983.1| AMP-dependent synthetase and ligase [Chloroherpeton thalassium ATCC
35110]
gi|193089261|gb|ACF14536.1| AMP-dependent synthetase and ligase [Chloroherpeton thalassium ATCC
35110]
Length = 607
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 195/408 (47%), Gaps = 53/408 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
I+S I+P D LS LP H YER GY++ F+ GI++ Y ++ + ++ +
Sbjct: 211 NIKSCSAILPLSEDDACLSFLPLSHAYERTVGYYLMFACGIKIYYAESIETISLNISEVR 270
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P +I+VP ++E + S I K + + R+ + + + + + A +R +Q
Sbjct: 271 PTVVITVPRLFERIKSSILKNVDNGAEVRKKLFYWALHLGYQHHADQRSGRSNFFVESQ- 329
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ LA L+ K+I+ G + VSGG +LP L
Sbjct: 330 ------------------------YALANLLILKQIRERFGGRLRFFVSGGAALPPDTGL 365
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+EA+G+ + G+GLTE++PV RP G+VG + + E+KI D
Sbjct: 366 FFEALGITILEGFGLTETAPVTHVNRPGKVKFGTVGTLLKNVEVKIAD-----------D 414
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G + +RG +M+GY+++ +AT + + +GW +TGDIG I G L + R
Sbjct: 415 GEILLRGPNIMKGYWQDDAATAEVI-RNGWFHTGDIGEIDSE----------GYLKITDR 463
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K IV S G+N+ PL +E + I Q +V+G+ + A+IVP+ E + AK+
Sbjct: 464 KKHIIVNSGGKNIAPLPIENRIHANKYIDQALVVGEKRPFLIALIVPNFENLEALAKQKG 523
Query: 416 IVHADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 460
+ +++ EL I LY + + S+ ++ ++ EPFT+
Sbjct: 524 LAYSNFEELISHHEIYQLYTNILRDISRELASHERVRKFLLLSEPFTI 571
>gi|399577910|ref|ZP_10771662.1| amp-forming long-chain acyl-CoA synthetase [Halogranum salarium
B-1]
gi|399237352|gb|EJN58284.1| amp-forming long-chain acyl-CoA synthetase [Halogranum salarium
B-1]
Length = 658
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 190/394 (48%), Gaps = 50/394 (12%)
Query: 76 LSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G Y +F+ G + Y + L++D Q +P SVP VYE LY
Sbjct: 269 LSFLPLAHVFERLAGHYLMFAAGATVAYAESPDTLREDFQLVRPTTGTSVPRVYEKLYDA 328
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ Q S R+ A + + AY G LT
Sbjct: 329 IRTQASESPVKERIFEWA-VGVGQAYHEVDN--PGTALTLK------------------- 366
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
H +A++LV+ +++ AIG + +SGGGSL + Y +G+ + GYGLTE
Sbjct: 367 -------HRIADRLVFSQVREAIGGRLEFFISGGGSLSADLCALYHGMGLPILEGYGLTE 419
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK---VRGSQVMQGY 309
+SPV++ P +G++G P+ EI+I ++ EV ++G V V+G V GY
Sbjct: 420 TSPVVSVNPPNGPKIGTIGTPVVDVEIEIDESVVGEVQRRETEGQVGELLVKGPNVTSGY 479
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ P T+Q+ E GW TGDI + P G + RAK +VLSTG+NV
Sbjct: 480 WNRPEETEQSFTE-GWFRTGDIVHLRPD----------GYIEFRERAKQLLVLSTGKNVA 528
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEK 428
P +E+A + L+ Q +V+G ++ A++VP+ E V A R I + D +L++++
Sbjct: 529 PGPIEDAFASNQLVEQCLVLGDGKKFVSALLVPNVEAVHEWADREGIDLPEDRRKLARDE 588
Query: 429 TI-SLLYGELRKWTSKCSF--QIGPIHVVDEPFT 459
+ + L E+ + + QI +V E FT
Sbjct: 589 RLRARLQREVDQVNERLESYEQIKQFRIVTEEFT 622
>gi|373457238|ref|ZP_09549005.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371718902|gb|EHO40673.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 652
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 176/351 (50%), Gaps = 47/351 (13%)
Query: 78 MLPPW-HVYERACG-YFIFSRGIEL--------MYTAVRNLKDDLQRYQPHYMISVPLVY 127
++ PW H + G Y + G + ++N+ +L+ +PH+++SVP +
Sbjct: 225 LILPWDHAFAHTVGLYTLIKNGASMAAVQSGKTQLETLKNIPKNLKEIRPHFLLSVPALA 284
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
+ I+K I A + + ++I++ Y EG W
Sbjct: 285 KNFRKNIEKAIRDKGKATERLFQQALKIAYLYNG-----EG------------------W 321
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQV 246
+ + PL+ L +K++++KI+ + G GGG+L + + F+ AIG+ +
Sbjct: 322 NKGKGFRKVYKPLYALYDKVLFRKIRDSFGGRLQFFIGGGALLDIEMQRFFYAIGIPMFQ 381
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE++PVI++ +P + LG+ G + E+KIVD NE LP G +G + V+G VM
Sbjct: 382 GYGLTEAAPVISSNKPHEHKLGTSGKVLKGMEVKIVDERGNE-LPTGQRGEICVKGENVM 440
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY+KNP+AT+ AL DGWL+TGD+G++ G L + GR K ++ + GE
Sbjct: 441 VGYWKNPTATENAL-RDGWLHTGDLGYLDEE----------GYLYVLGREKSLLIGNDGE 489
Query: 367 NVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
P +EEA L S I QI++ A++VP+K V+ A+ ++
Sbjct: 490 KYSPEGIEEAILDHSPYIDQIMLYNNQSPYTIALVVPNKAAVIEWARENNV 540
>gi|320353996|ref|YP_004195335.1| AMP-dependent synthetase and ligase [Desulfobulbus propionicus DSM
2032]
gi|320122498|gb|ADW18044.1| AMP-dependent synthetase and ligase [Desulfobulbus propionicus DSM
2032]
Length = 634
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 201/406 (49%), Gaps = 53/406 (13%)
Query: 62 SLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHY 119
++ + PA D FLS LP H +ER GY++ G + Y +++ L +D++ +P
Sbjct: 225 AVLQVHPARPDDLFLSFLPLSHSFERTVGYYVPMMAGCCIAYCRSLQELAEDMRLIRPTI 284
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
+ISVP +YE + + I++Q+ R + A + + F R +E R+Q+ P+
Sbjct: 285 LISVPRIYERIAARIEEQLERKGRLARWLFAAAVTVGF------RCFEA---QRDQRTPT 335
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 239
LI WPL L + + ++ G + V+GG + I +
Sbjct: 336 LRDRLI------------WPL--LRQLVAIPMLERFGGRVRLAVTGGAPVQEGISRLFLG 381
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
IG+ + GYGLTE++PV++ P N +VG P+ E+++ AE +E+L
Sbjct: 382 IGLPLVQGYGLTEAAPVVSTNEPANNRPTTVGPPLPGIEVRL--AEDHELL--------- 430
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
VRG VM GY++ P T + LD DGWL TGDI I H G + + GR+K+
Sbjct: 431 VRGPGVMLGYWQQPELTAEVLDADGWLKTGDIARI--DH---------GFIRIIGRSKEI 479
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
+V STGE V P+ +E A + LI Q +V+G+ + A++V + + + A L +
Sbjct: 480 LVTSTGEKVAPVAMEMALEQHPLIDQAMVVGEGRPHVAALLVVNPQAWMRLAAHLGLDAD 539
Query: 420 DASEL----SKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
D + L ++ +S + G LR + + Q+ + ++ E +T++
Sbjct: 540 DPASLDSDAARAAALSTVSGLLRAFPAPA--QVRGVCLLSEEWTID 583
>gi|448737723|ref|ZP_21719758.1| acyl-CoA synthetase [Halococcus thailandensis JCM 13552]
gi|445803279|gb|EMA53577.1| acyl-CoA synthetase [Halococcus thailandensis JCM 13552]
Length = 643
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 184/368 (50%), Gaps = 47/368 (12%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ F+ G + Y + L++D P SVP VYE LY
Sbjct: 261 LSFLPLAHVFERLAGHFLMFAAGASVAYAESPDTLQEDFPLVTPSTGTSVPRVYEKLYDS 320
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q + SA R + + + Y +R G L +
Sbjct: 321 IREQA-SESALRERIFEWAVDVGREYQ--ERESPGLSLRAKRA----------------- 360
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
LA++LV+++++ +G + + +SGGGSL + ++ +G+ + GYGLTE
Sbjct: 361 ---------LADRLVFEQVREGVGGNIEFFISGGGSLSPELGRLFDGMGLPILEGYGLTE 411
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET--NEVLPAGSKGIVKVRGSQVMQGYF 310
++PV+A P +G++G P+ E+K VDA +++ G G + VRG V GY+
Sbjct: 412 TAPVVAVNPPEAPEIGTIGPPVVDEEVK-VDASVVPDDLDADGEVGELLVRGPNVTDGYW 470
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
+NP AT+ + D + W TGD+ RR G + R+K +VLSTG+NV P
Sbjct: 471 ENPEATEDSFDGN-WFRTGDV----------VERRPDGYIAFRERSKQLLVLSTGKNVAP 519
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKT 429
+E+A + L+ Q +V+G ++ ++VP++E V A+ I + D+S L + +
Sbjct: 520 GPIEDAFAQRQLVEQCMVLGDGEKFVSGLVVPNEERVRKWAREEGIDLPDDSSALCQNEH 579
Query: 430 ISLLYGEL 437
+ GE+
Sbjct: 580 VQARIGEV 587
>gi|433429134|ref|ZP_20407305.1| acyl-CoA synthetase [Haloferax sp. BAB2207]
gi|432195189|gb|ELK51743.1| acyl-CoA synthetase [Haloferax sp. BAB2207]
Length = 666
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 162/336 (48%), Gaps = 48/336 (14%)
Query: 76 LSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ + + L++D Q +P SVP VYE LY
Sbjct: 262 LSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ Q S A +RV A + + AY P YL
Sbjct: 322 IRAQASESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL------------ 355
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
L H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 356 ---LTAKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
+SPVI+ P +G++G+P+ + E K+ + L G G + VRG V +GY+
Sbjct: 413 TSPVISVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGDAGGEVGELLVRGPSVTEGYW 472
Query: 311 KNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+P T+ A ED W TGD+ RR G + RAK +VLSTG+
Sbjct: 473 NDPEETEAAFVEDDEGRRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGK 522
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 523 NVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|345302941|ref|YP_004824843.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
gi|345112174|gb|AEN73006.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
Length = 632
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 164/340 (48%), Gaps = 52/340 (15%)
Query: 68 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 127
P +G+ LS LP HV+ R Y + +T L+D L++ +P +VP V
Sbjct: 239 PGPDGEVALSFLPLTHVFARTLFYGYLYYATSVYFTTPDALRDALRQVRPTTFATVPRVL 298
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E +Y + ++ T + + R + ++ R YE L R +
Sbjct: 299 EKIYGALVERAATMPGLKGRIFRWALDLA-------RRYE---LGREPRG---------- 338
Query: 188 LWARIICAILWPLHL-LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQ 245
L+ L L +A++LVY+K + A+G A + +GG +L + + A G+ +
Sbjct: 339 ---------LYRLQLAVADRLVYRKWREALGGRIAFIIAGGAALSAELANIFAAAGIPIL 389
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGLTE+SPVI RP N G+VG PI E+KI AE E+L RG V
Sbjct: 390 QGYGLTETSPVITYNRPELNRAGTVGVPIPGVEVKI--AEDGEIL---------TRGPHV 438
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
M GY+K+P T++ +DE+GW +TGDIG+ G LV+ R KD LSTG
Sbjct: 439 MLGYYKDPERTREVIDEEGWFHTGDIGYFTEE----------GFLVITDRKKDLFKLSTG 488
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+ V P LE+ L+ Q +V+G + A+I PD+E
Sbjct: 489 KYVMPQPLEQRLTADPLVEQALVVGPGYKFTAALIFPDEE 528
>gi|448599433|ref|ZP_21655337.1| acyl-CoA synthetase [Haloferax alexandrinus JCM 10717]
gi|445736894|gb|ELZ88434.1| acyl-CoA synthetase [Haloferax alexandrinus JCM 10717]
Length = 666
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 162/336 (48%), Gaps = 48/336 (14%)
Query: 76 LSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ + + L++D Q +P SVP VYE LY
Sbjct: 262 LSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ Q S A +RV A + + AY P YL
Sbjct: 322 IRAQASESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL------------ 355
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
L H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 356 ---LTAKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
+SPVI+ P +G++G+P+ + E K+ + L G G + VRG V +GY+
Sbjct: 413 TSPVISVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGEAGGEVGELLVRGPSVTEGYW 472
Query: 311 KNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+P T+ A ED W TGD+ RR G + RAK +VLSTG+
Sbjct: 473 NDPEETEAAFVEDDEGRRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGK 522
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 523 NVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|326800700|ref|YP_004318519.1| long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
gi|326551464|gb|ADZ79849.1| Long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
Length = 633
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 174/365 (47%), Gaps = 49/365 (13%)
Query: 55 MTNFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDL 112
+TN L I+ + D FLS LP HV+ER Y + + G ++ Y ++ L ++
Sbjct: 215 LTNNVRACLDQILEVDQHDTFLSFLPLSHVFERTATYHVCLALGAKIAYAQSIDLLAKNM 274
Query: 113 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 172
+P + +VP + E ++ K S A+ + + + Y K +
Sbjct: 275 YEVKPTVICAVPRLLEKIHDKAMKNGIQSGGAKAAIFKWALLTGKQYREKKEL------- 327
Query: 173 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
K+P IL + LAE+LV+ KI+ G K +SGGG+LP
Sbjct: 328 --GKKPG---------------PILTTQYNLAERLVFNKIKEKTGGRLKFMISGGGALPQ 370
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
++ F+ IG+K+ GYGLTE+SPV+A V G+VG + EI I D E+ ++
Sbjct: 371 NVGEFFGNIGIKILEGYGLTETSPVVAVTEFHRQVYGTVGRVLPGIEIAIQDIESLKIHT 430
Query: 292 AGS-----------KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 340
S +G + +RG +M+GY+ P TK +D DGW +TGDIG
Sbjct: 431 VQSHASFDPNLETEEGEIIIRGHCIMKGYWNKPEETKHVIDSDGWFHTGDIG-------- 482
Query: 341 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 400
+ G L + R K+ IV + G+NV P +E L+S I QI +IG ++ A+I
Sbjct: 483 ---KFYKGNLKITDRLKNMIVNAYGKNVYPTPVENTYLKSKRIEQIFLIGDNREYLTALI 539
Query: 401 VPDKE 405
VP++E
Sbjct: 540 VPNQE 544
>gi|374623848|ref|ZP_09696345.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
gi|373942946|gb|EHQ53491.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
Length = 606
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 173/365 (47%), Gaps = 49/365 (13%)
Query: 67 VPAENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVP 124
P D FLS LP H ER G Y G ++ Y +++ L +DL +P MISVP
Sbjct: 220 APMGADDLFLSFLPLSHTLERTAGCYMPMMVGAQVAYARSIQGLAEDLLTLRPTVMISVP 279
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+YE +Y I + S R + + I + ++ G+ P L
Sbjct: 280 RIYERIYGRINAGLEEKSPLARKLFLTTVNIGWRRFEHQQGRAGW-------HPGLL--- 329
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
LWP + +K+V K+ S +G + V GG LP I F+ +G+
Sbjct: 330 ------------LWP---VLKKIVADKVTSRLGGRLRYAVCGGAPLPPPIARFFIGLGLP 374
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
V G+G+TE+SPV++ RP N+ SVG P+ E+KI D +E+L VRG
Sbjct: 375 VFHGFGMTEASPVVSVNRPDDNLPASVGAPLPGVEVKIGD--DDELL---------VRGP 423
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VMQGY+ N AT++ +D DGWL++GD + R G + ++ GR K+ +VL
Sbjct: 424 SVMQGYWNNEEATRETIDADGWLHSGD---------KARFNEQGHIFII-GRIKEILVLG 473
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
GE V P ++E A + Q +V+G+ + A++V + EE AK L + DA
Sbjct: 474 NGEKVPPADMEMAITLDPVFEQALVLGEGKAYLSALVVLNPEEWEKLAKTLEVDPRDAEV 533
Query: 424 LSKEK 428
L K
Sbjct: 534 LRSRK 538
>gi|197118507|ref|YP_002138934.1| AMP-forming acyl-CoA synthetase [Geobacter bemidjiensis Bem]
gi|197087867|gb|ACH39138.1| acyl-CoA synthetase, AMP-forming [Geobacter bemidjiensis Bem]
Length = 603
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 170/367 (46%), Gaps = 54/367 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP HV+ER+ GY++ S G + + ++ + +++ P M+ VP +E +
Sbjct: 224 DLFLSFLPLSHVFERSVGYYLPLSCGAAIAFADSMEKISENMMELHPTIMVCVPRFFEKI 283
Query: 131 YSGIQKQIFTSSAARRVVARALIRI--SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
YS I + + S +R + R + + S+ Y + Y F L+
Sbjct: 284 YSRIYEAVHQLSLFKRKMFRRALAVGRSYVYARYIDKYVPFWLSFQ-------------- 329
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
H +A++LV+ K++S G K SGG L I+ F+ IGV V G
Sbjct: 330 ------------HAIADRLVFSKLRSRFGDRLKFCASGGAPLDREINEFFWIIGVPVFEG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTE+SPV+ + GSVG P+ TEI I G V RG QVM
Sbjct: 378 YGLTETSPVLCSNSYNGLRFGSVGTPLAFTEIAI-----------AGDGEVLARGPQVMA 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+ + +ATK+AL DGW TGDIG R G L + R KD IV + G+N
Sbjct: 427 GYYNDEAATKEAL-VDGWFRTGDIG-----------RLEEGFLYITDRKKDLIVTAGGKN 474
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E R I Q V G + A++VP E +L A+ I + D +L
Sbjct: 475 IAPQPIENLLKRDKYISQAYVYGDRKPYLTALLVPTLERLLEFAQERRIAYHDLEDLVVH 534
Query: 428 KTISLLY 434
+ + LY
Sbjct: 535 QPVIELY 541
>gi|452963530|gb|EME68596.1| AMP-dependent synthetase and ligase [Magnetospirillum sp. SO-1]
Length = 608
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 163/336 (48%), Gaps = 56/336 (16%)
Query: 75 FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP H YE G +F S G E+ Y + L ++ P M +VP +YET+ +
Sbjct: 227 FLSFLPLSHAYEHTAGLHFPISIGAEIRYAEGIEMLAANMAEVSPTIMTAVPRLYETMRT 286
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I K + S RR + A + + +R+ L AR+
Sbjct: 287 RILKGLARVSPLRRRLFMAALDLGTRRLKGQRL---------------------GLIARL 325
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
+L E+LV K+++ G KA VSGG LP + F+ A+GV++ GYG T
Sbjct: 326 ADLVL-------ERLVRDKVRARFGGRLKAFVSGGAPLPYEVGAFFVALGVRILQGYGQT 378
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E++PVIA RP N L +VG + E++I G + VRG VMQGY++
Sbjct: 379 EAAPVIAVNRPGHNRLETVGPAMPGVELRIA-----------GDGEILVRGELVMQGYWR 427
Query: 312 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 371
+ AT QA+D +GWL+TGDIG + P G L + R KD IV S G+NV P
Sbjct: 428 DAPATAQAIDSEGWLHTGDIGEVDPD----------GCLRITDRKKDIIVNSGGDNVAPQ 477
Query: 372 ELEEAALRSSLIRQIVVIGQDQRRPG--AIIVPDKE 405
+E + I Q +V G RRP A+IVPD++
Sbjct: 478 RIESFLTLEAEIAQAMVYG--DRRPHLVALIVPDRD 511
>gi|409721734|ref|ZP_11269892.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|448722240|ref|ZP_21704778.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|445789951|gb|EMA40624.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
Length = 643
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 166/337 (49%), Gaps = 46/337 (13%)
Query: 72 GDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYET 129
G LS LP HV+ER G+F+ F+ G + Y + L++D P SVP VYE
Sbjct: 257 GSTSLSFLPLAHVFERLAGHFMQFAAGSTVAYAESPDTLREDFSLVTPSSATSVPRVYEK 316
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
LY I++Q S+ + R+ A T R Y G + P
Sbjct: 317 LYDTIREQASGSAVSSRIFGWA--------TEVGRAYHG------SESPG---------- 352
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
A L H LA++LV+ +++ +G + +SGGGSL + + A+G+ + GY
Sbjct: 353 -----AGLRAKHALADRLVFSQVREGVGGNIDFFISGGGSLSPDLARLFHAMGLPILEGY 407
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET--NEVLPAGSKGIVKVRGSQVM 306
GLTE++PV+A P +G++G+P++ E++ VD+ N+ G G + V+G V
Sbjct: 408 GLTETAPVVAVNPPEAPEIGTIGYPVHDEEVR-VDSTVVPNDFDAEGEVGELLVKGPNVT 466
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GY+ P T A D W TGD+ +R G L R+K +VLSTG+
Sbjct: 467 EGYWNRPEETDDAFD-GKWFRTGDV----------VEQRPDGYLAFRERSKQLLVLSTGK 515
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
NV P +E+A + L+ Q +V+G ++ AI+VP+
Sbjct: 516 NVAPRPIEDAFASNPLVEQCMVVGDGEKFVSAIVVPN 552
>gi|383620428|ref|ZP_09946834.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
gi|448697789|ref|ZP_21698667.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
gi|445781155|gb|EMA32016.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
Length = 647
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 169/353 (47%), Gaps = 44/353 (12%)
Query: 76 LSMLPPWHVYERACGYF-IFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSG 133
+S LP HV+ER G+F IF+ G + Y + L++D P+ SVP VYE +Y
Sbjct: 262 VSYLPLAHVFERTAGHFLIFASGGCVAYAEDPDTLQEDFSAVGPNVATSVPRVYEKIYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q S +R+ A +D+
Sbjct: 322 IREQASESPVKKRIFEWATD-----------------------------VGVDYQETDDP 352
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
+L LA++LV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 353 GPVLSAKQALADRLVFSTVREALGGEIEMLISGGGSLSPELCTLYHAMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
++PV+A P +G++G + E+++ ++ N+ G G + V G V GY+
Sbjct: 413 TAPVLAVNPPEEPKIGTIGPALPDVELRVDESVANQDAFDDPGEVGELVVTGPNVTDGYW 472
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
+ PSAT +A EDGW TGDI + P G + R K +VLSTG+NV P
Sbjct: 473 EKPSATDRAFTEDGWFRTGDIVHLRPD----------GYIEFRDRVKQILVLSTGKNVAP 522
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
+E+A S ++ Q +V+G +++ GA++VP+ + + A I D E
Sbjct: 523 GPIEDAFAASEVVEQAMVVGDNEKFVGALLVPNTDHIREWADEEGIDLPDDPE 575
>gi|448727043|ref|ZP_21709420.1| acyl-CoA synthetase [Halococcus morrhuae DSM 1307]
gi|445792243|gb|EMA42854.1| acyl-CoA synthetase [Halococcus morrhuae DSM 1307]
Length = 643
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 182/368 (49%), Gaps = 47/368 (12%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ F+ G + Y + L++D P SVP VYE LY
Sbjct: 261 LSFLPLAHVFERLAGHFLMFAAGATVAYAESPDTLQEDFPLVTPSTGTSVPRVYEKLYDS 320
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q S R+ A + + Y +R G L +
Sbjct: 321 IREQAGESPLRERIFEWA-VDVGREYQ--QRESPGLSLRAKRA----------------- 360
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
LA++LV+++++ +G + + +SGGGSL + ++ +G+ + GYGLTE
Sbjct: 361 ---------LADRLVFEQVREGVGGNIEFFISGGGSLSPELGRLFDGMGLPILEGYGLTE 411
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET--NEVLPAGSKGIVKVRGSQVMQGYF 310
++PV+A P +G++G P+ EIK VDA +++ G G + VRG V GY+
Sbjct: 412 TAPVVAVNPPEAPEIGTIGPPVVDEEIK-VDASVVPDDLDADGEVGELLVRGPNVTDGYW 470
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
+NP AT+ + D + W TGD+ RR G + R+K +VLSTG+NV P
Sbjct: 471 ENPEATEDSFDGE-WFRTGDV----------VERRPDGYIAFRERSKQLLVLSTGKNVAP 519
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKT 429
+E+A + L+ Q +V+G ++ ++VP++E V A I + D+S L + +
Sbjct: 520 GPIEDAFAQRQLVEQCMVLGDGEKFVSGLVVPNEERVRKWAGEEGIDLPEDSSALCQNEH 579
Query: 430 ISLLYGEL 437
+ GE+
Sbjct: 580 VQARIGEV 587
>gi|448544962|ref|ZP_21625775.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|448547339|ref|ZP_21626817.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|448556217|ref|ZP_21631942.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
gi|445704740|gb|ELZ56649.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|445716350|gb|ELZ68094.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|445716969|gb|ELZ68698.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
Length = 666
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 163/336 (48%), Gaps = 48/336 (14%)
Query: 76 LSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ + + L++D Q +P SVP VYE LY
Sbjct: 262 LSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ + S A +RV A + + AY P YL
Sbjct: 322 IRAEAGESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL------------ 355
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
L H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 356 ---LTAKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
+SPVI+ P +G++G+P+ + E K+ + L G G + VRG V +GY+
Sbjct: 413 TSPVISVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGEAGGEVGELLVRGPSVTEGYW 472
Query: 311 KNPSATKQAL---DEDG-WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+P T+ A DE G W TGD+ RR G + RAK +VLSTG+
Sbjct: 473 NDPEETEAAFVGDDEGGRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGK 522
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 523 NVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|387131449|ref|YP_006294339.1| long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM7]
gi|386272738|gb|AFJ03652.1| Long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM7]
Length = 610
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 177/365 (48%), Gaps = 51/365 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 128
+ D FLS LP H ER GY++ G + Y+ V L DDL++ +P +I+VP ++E
Sbjct: 228 HDDVFLSFLPLSHTLERTGGYYLPMMAGASVTYSRGVAKLPDDLRQVKPTILIAVPRLFE 287
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+ + +Q+ T S ++ + + +I + ++R QKQ ++ V
Sbjct: 288 RFSAQLNQQLATKSWFQKCLFKLVI-----HAGWRRFL------WQQKQANWHV------ 330
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
ILWP+ L K+ K +Q G + VSGG +LP + + + +++ GY
Sbjct: 331 -----IQILWPI--LGNKIADKFLQRLGGRLRLAVSGGAALPGYAAKLFIGLQLRLIQGY 383
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTE+SP+I+ P N SVG PI KI D E E+L V G M G
Sbjct: 384 GLTETSPIISVNPPEKNRPQSVGPPIPGVTTKI-DPENQELL---------VDGPGKMLG 433
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG--GVLVLEGRAKDTIVLSTGE 366
Y+ N AT Q +D DGWL+TGD +C G + + GR KD +VLS GE
Sbjct: 434 YWNNHKATAQTIDVDGWLHTGD------------QAKCDEQGYIHITGRIKDILVLSNGE 481
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
P ++E A L+ L Q +V+G+ Q A++V D E A+ L + + L +
Sbjct: 482 KFPPSDIENALLQDPLFEQAIVVGEGQSYLAALLVLDGEAWQALAQSLGLDPMRSDSL-Q 540
Query: 427 EKTIS 431
+KT+
Sbjct: 541 DKTLQ 545
>gi|114321276|ref|YP_742959.1| AMP-dependent synthetase and ligase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227670|gb|ABI57469.1| AMP-dependent synthetase and ligase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 620
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 164/332 (49%), Gaps = 49/332 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H ER GY++ G + Y +V +L +DL ++P ++SVP +YE +
Sbjct: 230 DLFLSFLPLSHTLERTIGYYLPIMTGSTVAYARSVPDLPEDLATHRPTALVSVPRIYERV 289
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y IQ+ + S R + + +R+ + ++R +G C ++
Sbjct: 290 YGRIQEGLKAKSGLARALFHSAVRV--GWHRYQR-GQGLCGWHPRE-------------- 332
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
+ WPL +LV K+ + +G + +SGG L + + ++GV V GYG
Sbjct: 333 -----LAWPL---LHRLVAGKVTARLGGRVRVAISGGAPLSREVAQLFLSLGVPVLEGYG 384
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTESSPVI+ N G+VG P+ E++I G +G + RG +M GY
Sbjct: 385 LTESSPVISVNTLEDNRPGTVGKPLPGVEVRI-----------GEQGELLARGPNIMLGY 433
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ NP AT ALD DGWL+TGD + G + + GR K+ IV++ GE V
Sbjct: 434 WNNPEATAAALDRDGWLHTGDQARLDDE----------GRITITGRLKEIIVMANGEKVP 483
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
P ++E A + Q++V+G+ + GA++V
Sbjct: 484 PADMELAIANDPVFEQVMVVGEGRPYLGALVV 515
>gi|346226769|ref|ZP_08847911.1| amp-dependent synthetase and ligase [Anaerophaga thermohalophila
DSM 12881]
Length = 639
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 193/400 (48%), Gaps = 59/400 (14%)
Query: 81 PW-HVYERACGYFIFS-RG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETL 130
PW H + + F RG +E T + LK+ ++ QPH ++SVP + +
Sbjct: 224 PWDHAFAHTAALYAFMYRGASIASVEAGKTQIETLKNFASNILEIQPHVLMSVPAIAKNF 283
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
I+K + A+ A L +I+ Y + Y G R
Sbjct: 284 RKNIEKGVM----AKGKTANTLFKIAMKYAIW---YNGTGNNR----------------G 320
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 248
+ + + +PL+ L + +++K I+S G + GGG+L + IDL F+ A+G+ + GY
Sbjct: 321 KGLKKLTYPLYQLFDNILFKTIRSGFGGNLQFFIGGGAL-LDIDLQKFFYALGIPMYQGY 379
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GL+E++P+I+A P + +GS G +N+ EIKI D E NE LP G G + V+G VM G
Sbjct: 380 GLSEAAPIISANTPDHHKMGSSGRVVNNLEIKICDEEGNE-LPNGRSGEIVVKGENVMPG 438
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+KN ATK+ + +DGWL TGD+G++ G L + GR K ++ S GE
Sbjct: 439 YWKNEEATKETI-KDGWLYTGDLGYLDHE----------GYLYVLGRFKSLLIGSDGEKY 487
Query: 369 EPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
P +EEA + LI Q V+ +IVP++E+++ K L + +L E
Sbjct: 488 SPEGIEEAVIDHCPLIDQFVLHNNQNPYTVGLIVPNQEKIIQFFKSLDENLTEDQKL--E 545
Query: 428 KTISLLYGELRKWTSKCSFQI--------GPIHVVDEPFT 459
+T+ + +L ++ + + ++ EPFT
Sbjct: 546 ETLKAVESQLAQFKKGGKLENMFPQRWLPAAVIILPEPFT 585
>gi|373459321|ref|ZP_09551088.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371720985|gb|EHO42756.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 615
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 188/409 (45%), Gaps = 54/409 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQP 117
Q ++L + D L LP H Y+++ ++ S G+ + Y + + D + +P
Sbjct: 205 QFKALDPLFNFSENDIELCFLPLSHAYQKSSTHWTQSHGVTVYYCENPKEVLDCFKEVRP 264
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI--SFAYTAFKRIYEGFCLTRNQ 175
+M+ VP +YE +Y+ + + +S +R + + + + Y AFK+
Sbjct: 265 TFMVGVPRLYEKMYAKVFATLENASGFKRGLFEWALEVGKEYQYKAFKK----------- 313
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHID 234
I L H LA KLV KI++ +G S GG+ L I+
Sbjct: 314 ---------------ENISPYLRLKHTLARKLVLNKIRNIMGGRLNFFSAGGAPLSSEIE 358
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ A G+ + GYGLTE+SPV++ RP G+ G +N ++KI A E+L
Sbjct: 359 EFFFAAGIFIAQGYGLTETSPVVSCNRPDQFKFGTPGKVVNICQVKI--APDGEIL---- 412
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
V+G VM+GY++ P T + L DGW TGDIG++ G L +
Sbjct: 413 -----VKGENVMKGYYRKPELTAEVLSPDGWFRTGDIGYLD----------SDGFLHITD 457
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KD I+ + G+N+ P +E + I QI +IG ++ A+IVP E + A++
Sbjct: 458 RKKDIIITAGGKNIAPQPIESHIGKDYYIEQIALIGDKRKYITALIVPSFEALEEFAQKH 517
Query: 415 SIVHADASELSK-EKTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTV 460
I + SEL K EK I L + + S +I ++ +PF+V
Sbjct: 518 DIKYDTLSELVKNEKVIQFYRQRLDELSKPLSAYERIKKFTLLSQPFSV 566
>gi|302879073|ref|YP_003847637.1| AMP-dependent synthetase and ligase [Gallionella capsiferriformans
ES-2]
gi|302581862|gb|ADL55873.1| AMP-dependent synthetase and ligase [Gallionella capsiferriformans
ES-2]
Length = 595
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 161/334 (48%), Gaps = 49/334 (14%)
Query: 61 RSLYDIVPAENGDKFLSMLPPWHVYERACGYF--IFSRGIELMYTAVRNLKDDLQRYQPH 118
R+ D + D FLS LP H +ER GY+ + + +++ L +D+Q +P
Sbjct: 206 RACLDTFSVRSEDVFLSFLPLSHTFERTLGYYLTVMTGATVAFARSIQTLSEDMQVIRPT 265
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
+ISVP +YE +Y+ I+ ++ +R + + +A ++ R +
Sbjct: 266 LLISVPRIYERIYAVIRAKLEDGPRFKRRLFYLAVETGWAMFEHQQ-------GRGPWRA 318
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
S+L LWP + +KLV +K+ +G + +SGG +L +
Sbjct: 319 SFL---------------LWP---VLQKLVAQKVLDKLGGRLRVAISGGAALAAEFSRVF 360
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
+G+ + GYGLTE+SPVI+ N SVG PI+ E+++ G+
Sbjct: 361 VGLGLPIVQGYGLTETSPVISGNHLGNNFPDSVGQPISGVEVRL-----------GALSE 409
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
++VRG VM GY+ NP AT+ L DGWL TGDIG I+ G + + GR K
Sbjct: 410 LQVRGPNVMLGYWNNPEATRATLAADGWLRTGDIGHISDT----------GHIYITGRIK 459
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 391
+ IV+S GE + P ++E A L L Q++V G+
Sbjct: 460 EIIVMSNGEKIPPTDMELAILHDPLFEQVMVFGE 493
>gi|332528557|ref|ZP_08404545.1| AMP-dependent synthetase and ligase [Hylemonella gracilis ATCC
19624]
gi|332042068|gb|EGI78406.1| AMP-dependent synthetase and ligase [Hylemonella gracilis ATCC
19624]
Length = 638
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 204/407 (50%), Gaps = 40/407 (9%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQP 117
+++LY V D FLS LP H +ER GY++ + G ++Y +V+ L +D++R +P
Sbjct: 237 VKALYPFVTPLPDDVFLSFLPLSHTFERTTGYYLPIASGSAVVYARSVQQLAEDMKRVRP 296
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
+ISVP +YE +++ +Q+ + S+ +R+ A + ++R L +
Sbjct: 297 TVLISVPRIYERVHARLQEVLAKSAFKQRLFEAAQAK------GWQRFRAAHGLKAAPGE 350
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 236
+ A WL R++ P LL +LV + + + G + VSGG L
Sbjct: 351 DAAQAAKAGWL--RVL-----PWALL-RRLVAQPLMAQFGGRIRIAVSGGAPLAQAQARC 402
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+ +G+ + GYG+TE+SPV+AA RP N +VG + +++I G+
Sbjct: 403 FLGLGLPLLQGYGMTETSPVVAANRPDDNDPATVGRALPGVQVRI-----------GANR 451
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
++VRG+ VM+GY+ P T + LD +GWL+TGD I ++GR R + GR
Sbjct: 452 ELQVRGASVMRGYWNRPEDTARVLDAEGWLSTGDQAEI---DAQGRIR-------ILGRI 501
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
K+ IV STGE V P +LE+A L + L Q+ V+G+ + A+ V +E + AKRL +
Sbjct: 502 KEIIVTSTGEKVPPGDLEQAILDAPLFEQVFVVGEQRPFIAAVAVVQADEWIKLAKRLGV 561
Query: 417 VHADASELSKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 461
D L+ I+ ++ + T + P + + EP+ +
Sbjct: 562 DPRDDGSLAHPDVIAAALKQMERVTGSFARYAVPRAVTLTREPWNIE 608
>gi|114778103|ref|ZP_01452990.1| long-chain fatty-acid-CoA ligase [Mariprofundus ferrooxydans PV-1]
gi|114551521|gb|EAU54075.1| long-chain fatty-acid-CoA ligase [Mariprofundus ferrooxydans PV-1]
Length = 592
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 172/341 (50%), Gaps = 48/341 (14%)
Query: 67 VPAENGDKFLSMLPPWHVYERACGYFIFSR-GIELMYT-AVRNLKDDLQRYQPHYMISVP 124
VP D FLS LP H +ER G+F+ S G + Y +V L D+ +P MISVP
Sbjct: 207 VPVFADDLFLSFLPASHAFERTVGHFLPSACGAGIAYAESVTTLLRDMPEVRPTLMISVP 266
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+YE +Y+G+ ++ SA V+R L R++ +R+ G ++Q L A+
Sbjct: 267 RLYEKIYAGVDAKLAAGSA----VSRWLFRLA------QRL--GLNRFNRRRQGDDLSAV 314
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
WLWA L ++LV+ +++ +G +A VSGG +L I F A +
Sbjct: 315 AAWLWA------------LLDRLVHARLREKMGGRIRAFVSGGAALHPDIARFLLAADII 362
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
V GYGLTE+SPV++ R G+VG + E+K AE E+L V+G
Sbjct: 363 VLPGYGLTETSPVLSVNRQAYIKPGTVGPALPGVELKC--AEDGELL---------VKGP 411
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VMQGY++ P AT +A D DGWL TGDI I G + + R K+ +VLS
Sbjct: 412 MVMQGYWQQPLATAEAFDADGWLRTGDIVTI----------DGDGYITIMDRKKEIMVLS 461
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 404
GE + P +E+ + ++Q++VI + A++V D+
Sbjct: 462 NGEKLSPAVIEQHIAANPCVQQVMVIADQRPFVTALVVVDQ 502
>gi|448566848|ref|ZP_21637103.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
gi|445713437|gb|ELZ65214.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
Length = 666
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 161/336 (47%), Gaps = 48/336 (14%)
Query: 76 LSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ + + L++D Q +P SVP VYE LY
Sbjct: 262 LSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLVRPTTGTSVPRVYEKLYDA 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+ Q S A +R+ A + + AY P YL
Sbjct: 322 IRAQASESPAKKRIFEWA-VGVGQAY-------------HTTDAPGYL------------ 355
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
L H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 356 ---LTAKHRLADRLVFGQVREALGDNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 310
+SPVI+ P +G++G+P+ + E K+ + L G G + VRG V GY+
Sbjct: 413 TSPVISVNPPEEPKIGTIGYPLRNVETKLDTTVVGDQLGDAGGEVGELLVRGPNVTAGYW 472
Query: 311 KNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
NP T+ A ED W TGD+ + P G + RAK +VLSTG+
Sbjct: 473 NNPEETEAAFVEDDEGERWFRTGDVVELRPD----------GYIAFRERAKQILVLSTGK 522
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 523 NVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|268317263|ref|YP_003290982.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
gi|262334797|gb|ACY48594.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
Length = 630
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 163/340 (47%), Gaps = 52/340 (15%)
Query: 68 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 127
P +G+ LS LP HV+ R Y + +T L+D L++ +P +VP V
Sbjct: 239 PGPDGEVALSFLPLTHVFARTLFYGYLYYATSVYFTTPDALRDALRQVRPTTFATVPRVL 298
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E +Y + ++ + + R + ++ R YE L R +
Sbjct: 299 EKIYGALVERAAAMPGLKGRIFRWALDLA-------RRYE---LGREPRG---------- 338
Query: 188 LWARIICAILWPLHL-LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQ 245
L+ L L +A++LVY+K + A+G A + +GG +L + + A G+ +
Sbjct: 339 ---------LYRLQLAVADRLVYRKWREAMGGRIAFIIAGGAALSAELANIFAAAGIPIL 389
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGLTE+SPVI RP N G+VG PI E+KI AE E+L RG V
Sbjct: 390 QGYGLTETSPVITYNRPELNRAGTVGVPIPGVEVKI--AEDGEIL---------TRGPHV 438
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
M GY+K+P T++ +DE+GW +TGDIG+ G LV+ R KD LSTG
Sbjct: 439 MLGYYKDPERTREVIDEEGWFHTGDIGYFTEE----------GFLVITDRKKDLFKLSTG 488
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+ V P LE+ L+ Q +V+G + A+I PD+E
Sbjct: 489 KYVMPQPLEQRLTADPLVEQALVVGPGYKFTAALIFPDEE 528
>gi|390951964|ref|YP_006415723.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
gi|390428533|gb|AFL75598.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
Length = 605
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 177/354 (50%), Gaps = 52/354 (14%)
Query: 55 MTNFQ-IRSLYDIVPAENGDKFLSMLPPWHVYERACGYF--IFSRGIELMYTAVRNLKDD 111
+TN + +L ++ P D FLS LP H+ ER GY+ I + +V L +D
Sbjct: 212 LTNVHGVVTLINVYPE---DLFLSFLPLSHMLERTGGYYLPIMAGSCVAFARSVGQLAED 268
Query: 112 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 171
LQ +P MI+VP V+E +Y +Q Q+ + A R + R + ++ + AF R +G
Sbjct: 269 LQSIRPTVMIAVPRVFERVYQRLQDQLLSRPAPVRWLFR--LAVATGWRAFLR-EQG--- 322
Query: 172 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPM 231
R P L L WL R+ A+L EKL G + VSGG +LP
Sbjct: 323 -RGGWHPRLL--LWPWLRRRVGAAVL-------EKLG--------GRMRVAVSGGAALPA 364
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
+ + +G+ + GYGLTE+SPV++ NV SVG PI +++I
Sbjct: 365 GVAHTFIGLGLPLIQGYGLTETSPVVSFNPLRKNVPESVGVPIRGIQVRI---------- 414
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G+ + V+G VMQGY+ N +AT + L +DGWL+TGD ++R G +
Sbjct: 415 -GADDELMVKGDNVMQGYWNNHAATAKVLTQDGWLHTGD-----------QARIEDGHIY 462
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+ GR KD +VLS GE V P +LE A + L Q++V+G+ A++V + E
Sbjct: 463 ITGRIKDILVLSNGEKVPPADLEMAIVMDPLFDQVLVLGERHSYLSALLVLNAE 516
>gi|422348826|ref|ZP_16429718.1| hypothetical protein HMPREF9465_00608 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658878|gb|EKB31740.1| hypothetical protein HMPREF9465_00608 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 609
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 170/370 (45%), Gaps = 43/370 (11%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
+++ + V + GD FLS LP H +ER GY++ + G + Y +V L DDL+ +
Sbjct: 213 NVKATLECVFPQVGDIFLSFLPLSHTFERTAGYYLALATGCTIAYNRSVLLLADDLKTIR 272
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P +ISVP VYE +++ + ++ S A R + + I + FC +
Sbjct: 273 PTVIISVPRVYERIFARVHDKLKKSRPAARYLFDWAVEIG---------WRDFCRRNHLP 323
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLF 236
A +D L + L K+ + G + +SGG +L +
Sbjct: 324 VEHTGRAWLDGL-----------MRPLVRKVSSTLLDQFGGRLRIAISGGAALSSKVART 372
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+ +G+ + GYG+TE+SP+IA T N +VG P N+ E+++ G
Sbjct: 373 FCGLGLPIIQGYGMTEASPIIAGNNRTLNQPNTVGKPFNNVEVRL-----------GEGD 421
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
++++G + +GY+ P AT A EDGW TGD+G G+L ++GR
Sbjct: 422 EIQIKGPSITRGYWNRPDATADAFTEDGWFRTGDVGGFNEL----------GLLSIKGRI 471
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
K+ IV STGE V P +LE A L Q VIG+++ I V + +E AK +
Sbjct: 472 KEIIVTSTGEKVPPADLEAAIETDPLFSQCYVIGENRPYLSLITVVNPDEWASFAKSCGV 531
Query: 417 VHADASELSK 426
AD + L
Sbjct: 532 DPADPASLDN 541
>gi|21673982|ref|NP_662047.1| long-chain-fatty-acid-CoA ligase [Chlorobium tepidum TLS]
gi|21647127|gb|AAM72389.1| long-chain-fatty-acid--CoA ligase, putative [Chlorobium tepidum
TLS]
Length = 649
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 194/408 (47%), Gaps = 53/408 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQ 116
++S ++ + D LS LP H YER GY++ F+ G + + +V + ++ +
Sbjct: 251 NVKSCSTVIRIDQTDSSLSFLPLSHAYERTGGYYLMFACGARINLAESVETISLNISEAK 310
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + +VP +++ + + I K + + + +I F + Y K
Sbjct: 311 PTIIFTVPRLFDRMKASILKSVTSEGGVKE-------KIFFWAVSTGEKY--------HK 355
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
Q L + +L H LA+KLVY KI+ G + VSGG +LP
Sbjct: 356 Q----------LATGKVSPLLAVQHNLADKLVYSKIRKKFGGKLRYFVSGGAALPQKTGE 405
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+++IG+ + G+GLTE+SPV RP G+VG P+ + E+KI
Sbjct: 406 FFQSIGITILEGFGLTETSPVTNVNRPEKVKFGTVGLPVKNVEVKI-----------APD 454
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G + ++G +M+GY+K+ +A+ + L DGWL TGDIG + G L + R
Sbjct: 455 GEIMLKGPNIMKGYWKDEAASAEVL-RDGWLYTGDIGEVDSE----------GYLKITDR 503
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K IV S G+N+ PL++E L S + Q +++G+ + A+IVPD ++ A
Sbjct: 504 KKHIIVTSGGKNIAPLQIENLILDSPYVDQAMIVGEKRPFLIALIVPDFLKLRDFAAEHQ 563
Query: 416 IVHADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 460
I + EL K + +Y +L K S+ ++ +++EPF++
Sbjct: 564 IKASSTKELINTKEVIEVYEKLLKSISRQLATHEKVRKFLLLEEPFSI 611
>gi|408672874|ref|YP_006872622.1| AMP-dependent synthetase and ligase [Emticicia oligotrophica DSM
17448]
gi|387854498|gb|AFK02595.1| AMP-dependent synthetase and ligase [Emticicia oligotrophica DSM
17448]
Length = 588
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 193/413 (46%), Gaps = 58/413 (14%)
Query: 55 MTNFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 113
++NF+ S D P + + LS LP HVYER Y S+G+ + Y + + DDL+
Sbjct: 198 ISNFE--SCRDNFPIDETCRALSFLPLNHVYERMVLYLYMSKGMSIYYAQNMATIADDLR 255
Query: 114 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 173
+P +VP + E +Y I + + S +R + + + Y
Sbjct: 256 DVKPQIFTTVPRLLEKVYDKIVAKGYELSGLKRKIFLWALDLGLKYDP------------ 303
Query: 174 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
NQ+ ++ + W A+KLV+ K Q A+G + + SG +L
Sbjct: 304 NQQFSAWYNFQLKW----------------AQKLVFSKWQEALGGNIRMICSGAAALQPR 347
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARR--PTCNVLGSVGHPINHTEIKIVDAETNEVL 290
+ + A G+ V GYG+TE+SPVIA R P + +VG I+ T +KI AE E+L
Sbjct: 348 LARVFWAAGIPVSEGYGMTETSPVIATNRVMPLDLRISTVGPIIDGTTVKI--AEDGEIL 405
Query: 291 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 350
V+G VM GY+ P TK+ +D DGWL+TGDIG + G L
Sbjct: 406 ---------VKGPNVMLGYYNKPELTKEVIDADGWLHTGDIGKLDE----------GKYL 446
Query: 351 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 410
+ R K+ S G+ V P LE S I Q++V+G+ Q+ P A+I+P+ +
Sbjct: 447 KITDRKKEIFKTSGGKYVAPQVLENKMKESVFIEQMMVVGESQKFPAALIIPEFVALRDW 506
Query: 411 AKRLSIVH-ADASELSKEKTISLLYGELRKWTSKCS--FQIGPIHVVDEPFTV 460
K I + DA + ++ + L++ E+ K+ + + Q+ ++ P+T+
Sbjct: 507 CKTQGIDYTTDAEIIKNQQVLKLIFSEISKFNKEFAQYEQVKKFTLLANPWTI 559
>gi|78189102|ref|YP_379440.1| long-chain fatty-acid-CoA ligase [Chlorobium chlorochromatii CaD3]
gi|78171301|gb|ABB28397.1| long-chain fatty-acid-CoA ligase [Chlorobium chlorochromatii CaD3]
Length = 610
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 196/409 (47%), Gaps = 54/409 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQ 116
++S ++ D LS LP H YER GY++ F+ G ++ + ++ + ++ +
Sbjct: 211 NVKSCSTVLELNESDCALSFLPLSHAYERTGGYYLLFACGTQIYIAESIETVSLNMSEVK 270
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSA-ARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
P + +VP +++ + + + KQI A+++ AL Q
Sbjct: 271 PTIIFTVPRLFDRIRAILLKQIGEQPPPAQKLFEWAL----------------------Q 308
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
Y AL A + A+ H LA +L+YKKI +G + VSGG +LP I
Sbjct: 309 TGEEYYQALSSCGSAPPLLAMQ---HNLASQLIYKKIHQKMGGRLRYFVSGGAALPQKIG 365
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F++A+ V + G+GLTE+SPV RP G+VG IN+ E +I AE E+L
Sbjct: 366 EFFQALDVPILEGFGLTETSPVTHVNRPEKIKYGTVGKAINNVETRI--AEDGEIL---- 419
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
++G +M+GY+ + AT++ L +DGW TGD+G I G L + G
Sbjct: 420 -----LKGPNIMKGYWNDEEATREVL-KDGWFYTGDLGEI----------DSDGYLKITG 463
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R K IV S G+N+ PL +E + I Q++VIG+ + A+IVP + A++
Sbjct: 464 RKKHIIVTSGGKNIAPLPIENLIAENPFIGQVLVIGEKRPFLVALIVPAFPHLQAHARKE 523
Query: 415 SIVHADASELSKEKTISLLYGELRKWTS---KCSFQIGPIHVVDEPFTV 460
SI EL + K + +Y EL + S +I +++ PFT+
Sbjct: 524 SIQATTNRELMEHKKVQQIYEELLRTISMQLATHEKIRKFILIENPFTI 572
>gi|419802454|ref|ZP_14327641.1| AMP-binding enzyme [Haemophilus parainfluenzae HK262]
gi|419846035|ref|ZP_14369293.1| AMP-binding enzyme [Haemophilus parainfluenzae HK2019]
gi|385190316|gb|EIF37764.1| AMP-binding enzyme [Haemophilus parainfluenzae HK262]
gi|386414665|gb|EIJ29217.1| AMP-binding enzyme [Haemophilus parainfluenzae HK2019]
Length = 605
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 201/423 (47%), Gaps = 54/423 (12%)
Query: 22 FKVIFITLFFSRRDLPLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKF- 75
F+ F T ++ LF+ + T P M ++ Q+ + +DI N D+
Sbjct: 163 FQAEFETRLANKTMDDLFTIIYTSGTTGEPKGVMLDYNNLAHQLEA-HDIALDVNQDEVS 221
Query: 76 LSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGI 134
LS LP H++ERA ++ RG L Y N +++ L +P +M +VP YE +YS +
Sbjct: 222 LSFLPFSHIFERAWVAYVLHRGAILCYLENTNQVREALMEVRPTFMCAVPRFYEKIYSAV 281
Query: 135 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 194
++ + R+++ I + ++ ++ L++N+K P +L
Sbjct: 282 LDKVQKAPFIRQMIFHLAIAVG------QKRFD--LLSQNKKVPFFL------------- 320
Query: 195 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 253
+++A+KLV+ K++S +G K GG L I LF+ IG+ +++GYG+TE+
Sbjct: 321 ---QKCYVIADKLVFSKLRSLLGGRIKMMPCGGAKLEPSIGLFFHCIGINIKLGYGMTET 377
Query: 254 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 313
+ ++ S+G + +TE+KI E NE+L VRG VM+GY+K P
Sbjct: 378 TATVSCWDDHHFNPNSIGKLMPNTEVKI--GENNEIL---------VRGGMVMKGYYKKP 426
Query: 314 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 373
T QA EDG+L TGD G G L + R K+ + S G+ + P +
Sbjct: 427 EETTQAFTEDGFLKTGDAGEFDAE----------GNLFITDRIKELMKTSNGKYIAPQYI 476
Query: 374 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 433
E + I QI +I ++ A+IVP + V A++L+I + D EL K I +
Sbjct: 477 ESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSVEEYARKLNIKYQDRIELLKHSEIIKM 536
Query: 434 YGE 436
+ +
Sbjct: 537 FEQ 539
>gi|429748961|ref|ZP_19282118.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429169511|gb|EKY11261.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 599
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 192/388 (49%), Gaps = 48/388 (12%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQ 116
FQ+ + + ++ D L LP HV+ERA F + + + Y + N +++ L +
Sbjct: 208 FQMVGHSERLAVDDSDSSLCFLPLSHVFERAWTCFCLYKCVPVYYLSDTNKVREALAEVR 267
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M +VP YE +++ + + SS +RV+ +A ++ A K E
Sbjct: 268 PTLMCAVPRFYEKIFATVHDRADASSFVKRVLFKAAVKTGKRMIALKEANE--------- 318
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+PS+ WL + L +KLVY K++ A+G K GG +L I
Sbjct: 319 KPSF------WLQQ---------TYNLFDKLVYSKLKEALGGRIKFMPCGGANLEPSIGR 363
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+++IG+ V++GYG+TE++ I+ L SVG + + +I+I E NE+L
Sbjct: 364 FFQSIGINVKLGYGMTETTATISCWGDDKFDLQSVGEVMPNVQIRI--GEENEIL----- 416
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
V+G VM+GY+KNP T + DG+L TGD G + +++ V + E R
Sbjct: 417 ----VKGGMVMKGYYKNPEETAKVFTNDGYLRTGDAGNLDGNNN---------VFITE-R 462
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K+ + S G+ + P +E + +LI QI VI +R A+IVP+ E + K L+
Sbjct: 463 IKELMKTSNGKYIAPQHIEGKVGKYTLIEQIAVIADGKRFVSALIVPNFEALSQVMKELN 522
Query: 416 IVHADASELSKE-KTISLLYGELRKWTS 442
I + + ++L K+ + I + +L+K+ S
Sbjct: 523 IKYKNTADLLKQSQVIEYISKQLQKFQS 550
>gi|448320502|ref|ZP_21509989.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
gi|445605967|gb|ELY59882.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
Length = 661
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 176/375 (46%), Gaps = 56/375 (14%)
Query: 59 QIRSLYDIVPAENGD--------KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNL 108
Q+R Y P ++ + + +S LP HV+ER G+F+ F+ G + Y + L
Sbjct: 237 QVRKRYGPRPDKDDELPVIDETVQSVSYLPLAHVFERTSGHFLLFASGACVAYAESTDTL 296
Query: 109 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 168
K+D QP SVP VYE +Y I++Q S A +R+ A + Y
Sbjct: 297 KEDFGTVQPDTATSVPRVYEKIYDTIREQASESGAKKRIFEWA-TDVGVEY--------- 346
Query: 169 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 227
+ P IL LA+KLV+ ++ A+G + +SGGG
Sbjct: 347 ----QESDDPG---------------PILSAKQSLADKLVFSNVREALGGEIELLISGGG 387
Query: 228 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA--E 285
SL + Y A+G+ + GYGLTE++PV++ P +G++G P+ +++I D+ E
Sbjct: 388 SLSKELCTLYHAMGLPIYEGYGLTETAPVVSVNPPEAPEIGTIGPPLPGVDVRIDDSLVE 447
Query: 286 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRG 341
G G + V G V QGY+ P AT ++ D+DG W TGDI + P
Sbjct: 448 GETFDDPGEVGELLVSGPNVTQGYWNKPGATTESFLEDDDGSRWFRTGDIVHLRPDD--- 504
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
+ R K +VLSTG+NV P +E+A S ++ Q +V+G ++ GA++V
Sbjct: 505 -------YIEFRDRVKQILVLSTGKNVAPGPIEDAFAASEVVEQCMVVGDGKKFVGALLV 557
Query: 402 PDKEEVLMAAKRLSI 416
P+ + + A I
Sbjct: 558 PNTDHIREWADEQGI 572
>gi|300771404|ref|ZP_07081280.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300762074|gb|EFK58894.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 591
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 175/359 (48%), Gaps = 53/359 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLY 131
+K LS LP H++ER Y FSRG+++ Y + N+ D+ +P +VP V E +Y
Sbjct: 211 NKALSFLPLCHIFERMVVYLYFSRGVQIYYAENLDNIVADINEVKPMAFTTVPRVLEKVY 270
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
I ++ +AL I A + L ++P A ++
Sbjct: 271 DKIVEK-----------GKALTGIKKAL-----FFWALELGHKYQEPEKNGAFYNFKLG- 313
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
+A KL++ K + A+G K VSGG +L + + A G++V GYGL
Sbjct: 314 -----------IARKLIFSKWKEALGGEIKLIVSGGAALQERLARVFWAAGIQVLEGYGL 362
Query: 251 TESSPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
TE+SPVIA +P G+VG +++ ++KI G G + V+G + G
Sbjct: 363 TETSPVIAVNTWQPNGVRFGTVGKVLSNLDVKI-----------GQDGEILVKGPSITAG 411
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+KN ATK+A+DE+G+ +TGDIG ++ G L + R K+ + G+ V
Sbjct: 412 YYKNQEATKEAIDEEGYFHTGDIGELSKD----------GFLKITDRKKEMFKTAGGKYV 461
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
P LE + S+LI Q++V+G++++ P A+IVP EE+ K I + E+ K+
Sbjct: 462 APQVLENKFMESTLIGQVMVLGENRKFPSALIVPAFEELEKWCKHKGIAYTSKDEIIKD 520
>gi|350561455|ref|ZP_08930293.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780487|gb|EGZ34805.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 604
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 163/349 (46%), Gaps = 47/349 (13%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRY 115
F + P D FLS LP H ER GYF+ + G E+ + ++ L +DL+
Sbjct: 209 FNAHAASQCAPLGGEDVFLSFLPLSHTLERTAGYFLPMAVGAEVAFARSIAQLAEDLRVV 268
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
QP ++SVP +YE++Y+ IQ + A R + +A + +A + + G+
Sbjct: 269 QPTVLVSVPRIYESVYAKIQAGLKQKPAFARRLFQATVNTGWARFEYLQRRAGWSPRLLL 328
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL 235
+ AR + L L +L Y V GG LP I
Sbjct: 329 WPLLRRLV------ARQV------LERLGGRLEY------------AVCGGAPLPPPIAR 364
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ +G+ V GYGLTE+SPV+ RP N+ S+G P+ EI+I E +E+L
Sbjct: 365 FFIGLGLPVYHGYGLTEASPVVTVNRPDDNLPASIGKPLPGVEIRI--GEQDELL----- 417
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
R VM GY++N AT A+D DGWL+TGD +R R G + + GR
Sbjct: 418 ----TRSPSVMLGYWRNDEATAAAIDSDGWLHTGD-------KARVDDR---GFVFITGR 463
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 404
KD IVL GE V P ++E A L Q++VIG+ + A++V D
Sbjct: 464 IKDIIVLGNGEKVPPADMEMAIQLDPLFDQVLVIGEARPFLSALVVLDD 512
>gi|296282950|ref|ZP_06860948.1| putative long-chain-fatty-acid--CoA ligase (long-chain acyl-CoA
synthetase) [Citromicrobium bathyomarinum JL354]
Length = 603
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 190/414 (45%), Gaps = 76/414 (18%)
Query: 63 LYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYM 120
L D N ++FLS LP H YE G F+ G ++ Y + L +++ P M
Sbjct: 220 LIDDFDLSNDERFLSFLPLSHAYEHTGGQFLPIGVGAQIFYAEGLEKLASNIEETSPTVM 279
Query: 121 ISVPLVYETLYSGIQKQIFT-SSAARRVVARAL-IRISFAYTAFKRIYEGFCLTRNQKQP 178
+ VP ++E L + I KQI AA ++ RAL I A KR+ +
Sbjct: 280 VVVPRLFEVLRTRIMKQIAKQGGAASFLLDRALEIEERAAKKGKKRLRDK---------- 329
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
P+ L KL+ KI+ G KA VSGG L + +F+
Sbjct: 330 --------------------PMDALVGKLLRPKIRQKFGGRIKAMVSGGAPLNPDVGIFF 369
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+A+G+ + GYG TE+ PVI+ RP V + +VG P+ E+KI AE E+L
Sbjct: 370 QALGLPMMQGYGQTEAGPVISCNRPAAGVSMDTVGPPMKGVEVKI--AEDGEIL------ 421
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
RG VM GY++N T +AL +DGWL+TGDIG + RGR +V+ R
Sbjct: 422 ---CRGELVMHGYWQNQGETDRAL-KDGWLHTGDIGHL---DERGR-------IVITDRK 467
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP--GAIIVPDKEEVLMAAKRL 414
KD IV G+NV P +LE I Q +V+G RRP +IVPD E L
Sbjct: 468 KDMIVNDKGDNVAPQKLEGMLTLQPEIGQAMVVG--DRRPYVVGLIVPDTEWA------L 519
Query: 415 SIVHADASELSKEKTISL--LYGELRKWTSKCSFQIGPIHVV------DEPFTV 460
++ L +K + L E+RK + + ++ + V DEPF++
Sbjct: 520 DWCNSQNKSLDCKKVLELPEFRAEIRKAIDRVNAELSVVEKVRGFAFADEPFSI 573
>gi|227540636|ref|ZP_03970685.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227239498|gb|EEI89513.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 591
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 175/360 (48%), Gaps = 55/360 (15%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLY 131
+K LS LP H++ER Y FSRG+++ Y + N+ D+ +P +VP V E +Y
Sbjct: 211 NKALSFLPLCHIFERMVVYLYFSRGVQIYYAENLDNIVADINEVKPMAFTTVPRVLEKVY 270
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
I ++ +AL I A + L ++P
Sbjct: 271 DKIVEK-----------GKALTGIKKAL-----FFWALELGHKYQEPEK----------- 303
Query: 192 IICAILWPLHL-LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
+ L L +A KL++ K + A+G K VSGG +L + + A G++V GYG
Sbjct: 304 --NGAFYNLKLGIARKLIFSKWKEALGGEIKLIVSGGAALQERLARVFWAAGIQVLEGYG 361
Query: 250 LTESSPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
LTE+SPVIA +P G+VG +++ ++KI G G + V+G +
Sbjct: 362 LTETSPVIAVNTWQPNGVRFGTVGKVLSNLDVKI-----------GQDGEILVKGPSITA 410
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+KN ATK+A+DE+G+ +TGDIG ++ G L + R K+ + G+
Sbjct: 411 GYYKNEEATKEAIDEEGYFHTGDIGELSKD----------GFLKITDRKKEMFKTAGGKY 460
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
V P LE + S+LI Q++V+G++++ P A+IVP EE+ K I + E+ K+
Sbjct: 461 VAPQVLENKFMESTLIGQVMVLGENRKFPSALIVPAFEELEKWCKHKGIAYTSKDEIIKD 520
>gi|289581849|ref|YP_003480315.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|289531402|gb|ADD05753.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
Length = 669
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 185/410 (45%), Gaps = 77/410 (18%)
Query: 59 QIRSLYDIVPAENGD--------KFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-L 108
QIR + P + D + +S LP HV+ER G+F+ F+ G + Y + L
Sbjct: 237 QIRKRFAPRPDRDDDVPVIDSESQAMSYLPLAHVFERTAGHFLLFASGACVAYAENPDTL 296
Query: 109 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 168
++D QP+ SVP VYE +Y I++Q SS +R+ A
Sbjct: 297 QEDFSTVQPNTATSVPRVYEKIYDAIREQASESSVKKRIFEWATD--------------- 341
Query: 169 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 227
+++ A IL LA+KLV+ ++ A+G + +SGGG
Sbjct: 342 --------------VGVEYQRADSPGPILNAKRALADKLVFSTVREALGGEIEILISGGG 387
Query: 228 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 287
SL + Y A+G+ + GYGLTE+SPVIA P +G++G P+ +I I ++ N
Sbjct: 388 SLSPELCRLYHAMGLPIFEGYGLTETSPVIAVNPPEEPKIGTIGPPVVDVDISIDESVVN 447
Query: 288 EVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDE----DG----------------- 324
+ G+ G + VRG V QGY+ PSAT +A E DG
Sbjct: 448 QDAFDDPGAVGELLVRGPNVTQGYWNKPSATDRAFTEGVQPDGGAALEAPREDGDADADD 507
Query: 325 ---WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 381
W TGD+ + R G + R K IVLSTG+NV P +E+A S
Sbjct: 508 DGLWFRTGDVVHL----------RDDGYISFRDRVKQLIVLSTGKNVAPGPIEDAFAASE 557
Query: 382 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTI 430
++ Q +V+G ++ GA++VP+ E + A I + DA L + +
Sbjct: 558 IVEQAMVVGDGEKFIGALLVPNTEHIREWADEEGIDLPGDAEALCDDDRV 607
>gi|184201148|ref|YP_001855355.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
gi|183581378|dbj|BAG29849.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
Length = 602
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 168/337 (49%), Gaps = 49/337 (14%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYET 129
G + L LP HV+ R GI L +T V L DDL R++P ++++VP V+E
Sbjct: 224 EGARTLLFLPLAHVFARFVEVTSLDAGIALAHTPDVSQLMDDLARFKPTFILAVPRVFEK 283
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+ +G + + S ++++ + + A++ + + + P WL
Sbjct: 284 ILAGARFKAQAGSPVKKLIFERAVATAAAWSKASQ--------QGRVSP--------WLA 327
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
AR H L +KLVY ++ A+G + VSGG +L ++ F+ IGV V GY
Sbjct: 328 AR---------HRLYDKLVYSTLREAMGGEVRYAVSGGAALGEYLAHFFNGIGVFVVEGY 378
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTE++ I+A P+ N LG+VGHP+ E+ I AE E+L VRG V +
Sbjct: 379 GLTETTAPISANVPSINRLGTVGHPMPGNEVAI--AEDGEIL---------VRGVNVFER 427
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y P T +A DGW TGD+G + G+L + GR K+ IV ++G+NV
Sbjct: 428 YNGLPEKTAEAF-RDGWFATGDLGHLDDE----------GLLTVTGRKKEIIVTASGKNV 476
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P +LE+ S+ + QI+V+G ++ A+I D E
Sbjct: 477 IPTQLEDPIRASATVGQIMVVGDNRPFVAALITLDPE 513
>gi|441505110|ref|ZP_20987100.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
gi|441427211|gb|ELR64683.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
Length = 607
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 186/403 (46%), Gaps = 52/403 (12%)
Query: 38 LFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T P M ++ QI + + + GD L LP HV+ERA ++
Sbjct: 180 LFTLIYTSGTTGTPKGVMLDYGNVAGQIEGHDEKLALDEGDVSLCFLPLSHVFERAWTFY 239
Query: 93 IFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 151
RG + + L++ L +P+ M +VP VYE +YS + +++ + R+V+
Sbjct: 240 ALHRGGVNCYLSDTNKLREALVEVKPNVMAAVPRVYEKIYSAVHEKVSRAPFHRKVM--- 296
Query: 152 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 211
++A R+ C + Q++PS L L + LA+KLV K
Sbjct: 297 ---FTWAVNMGARM--ALC-HQEQRKPSLL---------------LKKSYKLADKLVLSK 335
Query: 212 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 270
++ +G K GG L I F+ AIG+ V++GYG+TE++ I+ C S+
Sbjct: 336 LRKILGGQIKFMPCGGAKLDAGIGRFFHAIGINVKLGYGMTETTATISCWDDECFNPDSI 395
Query: 271 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 330
G P+ E+KI E NE+L VRG VM+GY+K P + + EDG+L TGD
Sbjct: 396 GLPMPGAEVKI--GENNEIL---------VRGPMVMRGYYKMPEESAKNFTEDGFLKTGD 444
Query: 331 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 390
G G L + R K+ + S G+ + P +E A + I QI VI
Sbjct: 445 AGHFDDK----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIA 494
Query: 391 QDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 433
++ A+IVP E + A+ L+I + D EL K I L
Sbjct: 495 DTRKFVSALIVPCFEALEEHARELNIKYHDRLELVKHSQIREL 537
>gi|325105263|ref|YP_004274917.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
gi|324974111|gb|ADY53095.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
Length = 592
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 180/370 (48%), Gaps = 57/370 (15%)
Query: 76 LSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGI 134
LS LP H++ER Y F GI + Y ++ + +L +PH SVP + E +Y
Sbjct: 215 LSFLPLSHIFERMVVYMYFYLGISVYYAESLDTIVQNLSEVKPHCFTSVPRLLEKVYD-- 272
Query: 135 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 194
++VA+ T K+ + L K Y + + W
Sbjct: 273 -----------KIVAKG-----HELTGIKKSLFFWALNLGLK---YELDGANGAW----- 308
Query: 195 AILWPLHL-LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
+ L L LA KL++KK + A+G VSGG +L + + G+KV GYGLTE
Sbjct: 309 ---YELQLKLARKLIFKKWKDALGGEIMLIVSGGAALQERLARVFWGAGIKVLEGYGLTE 365
Query: 253 SSPVIAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
+SPVI+ P G+VG P+ + E+KI AE E+L +G +M+GY+
Sbjct: 366 TSPVISVNGPRKGETKFGTVGKPLFNVEVKI--AEDGEIL---------CKGPSLMKGYY 414
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K AT++A+ E GW +TGDIG + G L + R K+ + G+ V P
Sbjct: 415 KRDDATQEAVTEGGWFHTGDIGNLKD-----------GFLTITDRKKEVFKTAGGKYVAP 463
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKT 429
LE S+ I Q++V+G+++R P A+IVP+ E+V+ AKR I D +L+K +K
Sbjct: 464 QVLETKFKESTFIEQVMVLGENRRFPSALIVPNFEKVIEWAKRNQIAETDHQKLAKNQKV 523
Query: 430 ISLLYGELRK 439
I ++ E+ +
Sbjct: 524 IDKIWSEVDR 533
>gi|336253150|ref|YP_004596257.1| Long-chain-fatty-acid--CoA ligase [Halopiger xanaduensis SH-6]
gi|335337139|gb|AEH36378.1| Long-chain-fatty-acid--CoA ligase [Halopiger xanaduensis SH-6]
Length = 666
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 177/382 (46%), Gaps = 62/382 (16%)
Query: 65 DIVPA-ENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMI 121
D VP + + +S LP HV+ER G+F+ F+ G + Y + L++D +P
Sbjct: 252 DDVPTLDETSRAVSYLPLAHVFERTAGHFVLFATGASVAYAESPDTLQEDFSLVEPTTAT 311
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
SVP VYE +Y I++Q S A +R+ A + AY + +P L
Sbjct: 312 SVPRVYEKIYDRIREQASESPAKKRIFEWA-TDVGVAY-------------QETDEPGPL 357
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
L LA+KLV+ ++ A+G + + +SGGGSL + Y A+
Sbjct: 358 ---------------LRAKRTLADKLVFSTVREALGGNIELLISGGGSLSPELCQLYHAM 402
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK- 299
G+ + GYGLTE+SPVI+ P +G++G P+ EI I ++ ++ A G V
Sbjct: 403 GLPIHEGYGLTETSPVISVNPPGEVKIGTIGPPVVDVEIAIDESVADQAAFADDPGEVGE 462
Query: 300 --VRGSQVMQGYFKNPSATKQALDED----------------GWLNTGDIGWIAPHHSRG 341
VRG V +GY+ P AT ++ +D W TGD+
Sbjct: 463 LLVRGPNVTRGYWNKPGATDRSFTDDIGESEATVMADGEASGQWFRTGDV---------- 512
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
RR L RAK +VLSTG+NV P +E+ + S ++ Q +V+G ++ GA+IV
Sbjct: 513 VHRRPDDYLEFRDRAKQILVLSTGKNVAPAPIEDRFVSSEVVEQCMVVGDGEKFVGALIV 572
Query: 402 PDKEEVLMAAKRLSIVHADASE 423
P+ V A R I D E
Sbjct: 573 PNTAHVREWADREGIDLPDDPE 594
>gi|406883851|gb|EKD31364.1| hypothetical protein ACD_77C00342G0004 [uncultured bacterium]
Length = 624
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 183/354 (51%), Gaps = 46/354 (12%)
Query: 78 MLPPWHVYERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYE 128
+LP H + G++I S+G ++ +A+ LK+ ++ +P+ ++SVP + +
Sbjct: 231 ILPLDHCFAHVVGFYIMISQGAIVATVQQGKSAMETLKNIPVNIMDVKPNLILSVPALAK 290
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+ I+ + + + ++++FAY R+ W
Sbjct: 291 SFKKNIENSVKSKGGFIWGLYNFALKVAFAYN------------RD-----------GWD 327
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVG 247
+ +L PL LL +K+++ K++ A+G GGG+L + FY AIG+ + G
Sbjct: 328 RGKNGTFLLHPLKLLFDKILFSKMRQAMGGELEFFVGGGALLDKELQKFYYAIGIPMYQG 387
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGL+E++P+I+A P + LGS G P+ EI+I+++E ++LP G G + V+G VM
Sbjct: 388 YGLSEATPIISANTPNRHKLGSSGIPVKPLEIRIMNSE-GKILPLGESGEIVVKGENVMA 446
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+KNP +TK+ + +DGWL TGD+G++ P G L ++GR K ++ S GE
Sbjct: 447 GYWKNPISTKETV-KDGWLYTGDLGFMDPD----------GFLHVKGRFKSLLIGSDGEK 495
Query: 368 VEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 420
P E+EE + +S++I+Q+++ A+IV DK L + + V D
Sbjct: 496 YSPEEIEEVIVTQSNIIQQMMLYNNQSAYTIAVIVADKNSPLKGRELIKAVWED 549
>gi|387128044|ref|YP_006296649.1| long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM1]
gi|386275106|gb|AFI85004.1| Long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM1]
Length = 604
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 191/409 (46%), Gaps = 66/409 (16%)
Query: 63 LYDIVPAENGDKFLSMLPPWHVYERACGYF---------IFSRGIELMYTAVRNLKDDLQ 113
++I+P D FLS LP H ER GY+ +FSR I L L DD++
Sbjct: 218 FFEILP---DDVFLSFLPLSHTLERTGGYYLPMMAGSKVVFSRSIPL-------LADDMR 267
Query: 114 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 173
+ QP MI+VP ++E +Y + KQ+ S +R + + + + +KR F +
Sbjct: 268 QVQPTIMIAVPRIFERIYDRVHKQLAEGSWLKRRIFKLAVEV-----GWKR----FQYQQ 318
Query: 174 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHI 233
+K S + L LL + +V K Q G + VSGG +LP+H
Sbjct: 319 GRKYWSPSLLLW---------------PLLYKLVVTKFHQRLGGKLRLAVSGGAALPVHA 363
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
+ + + + GYGLTE+SPVI+ P+ N SVG I E++I G
Sbjct: 364 AKMFIGLDLVLLQGYGLTETSPVISVNEPSSNDPASVGRAIQGVEVRI-----------G 412
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
++V+G M GY+ N AT Q +D DGWL+TGD I+ G + +
Sbjct: 413 KDEELEVKGPGNMLGYWNNHKATAQTIDADGWLHTGDKAHISE----------SGHIYIV 462
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR KD +VL+ GE V P ++E A + + LI Q +V+G+ Q A++V + E A++
Sbjct: 463 GRIKDILVLNNGEKVPPADIEAAIVSNGLIDQALVVGEGQPYLAALLVINGESWPQIAQQ 522
Query: 414 LSIVHADASELSKEKTISLLYGELRKWTSK--CSFQIGPIHVVDEPFTV 460
L + L + LR+W + +I +H+ +P+T+
Sbjct: 523 LGLDPLQNESLGSKVLQQHFVRLLRQWLFEFPAYARIRRVHLTLQPWTI 571
>gi|383789327|ref|YP_005473901.1| AMP-forming long-chain acyl-CoA synthetase [Spirochaeta africana
DSM 8902]
gi|383105861|gb|AFG36194.1| AMP-forming long-chain acyl-CoA synthetase [Spirochaeta africana
DSM 8902]
Length = 645
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 171/355 (48%), Gaps = 53/355 (14%)
Query: 67 VPAENGDKFLSMLPPWHVYERACG-----------YFIFSRGIELMYTAVRNLKDDLQRY 115
+PA G + L +LP H + G YF+ +RG + +RN+ +L
Sbjct: 225 IPA--GYQTLLILPCDHSFAHTVGIYASLVAGISLYFVDARGGSM--AILRNIPGNLVET 280
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
P ++++VP + IQ + + + IR A R +G+
Sbjct: 281 DPTFLLTVPALTGNFMKKIQNGVAAKGSFVNGIFERGIRAGIA-----RNGDGY------ 329
Query: 176 KQPSYLVALIDWL-WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
Q +L +L W LLAE LV++K+++ G K VSGG L +
Sbjct: 330 HQVPFLTRARHFLPW------------LLAELLVFRKVRTIFGKKVKFCVSGGALLDLGQ 377
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
F+ A+G+ V GYG+TE+SP+I++ P C LG+ G P ++K+V + +E P G
Sbjct: 378 QQFFHALGLPVYQGYGMTEASPIISSNHPWCYKLGTSGKPFPTVQVKVVLQDGSEAAP-G 436
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
KG + VRG VM+GY KNP AT++AL DGWL+TGD+G++ G L +
Sbjct: 437 EKGQICVRGPNVMKGYLKNPDATEEAL-RDGWLHTGDLGFL----------DADGFLTVS 485
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSS-LIRQIVVIGQDQRRPGAIIVPDKEEV 407
GR K ++ + GE P E+EE + I Q ++ R GA+IVPD + V
Sbjct: 486 GREKALLISADGEKYSPEEIEEVMTTACPYISQAMLYNDHNRFTGALIVPDTDAV 540
>gi|27376399|ref|NP_767928.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA
110]
gi|27349539|dbj|BAC46553.1| blr1288 [Bradyrhizobium japonicum USDA 110]
Length = 619
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 183/360 (50%), Gaps = 49/360 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
++++ + A D FLS LP H +ER GY+ + G + Y +V L DDL+ +
Sbjct: 224 NVKAIAHRIAASPDDVFLSFLPLSHTFERTGGYYYPIAAGACVAYARSVPQLGDDLKHVR 283
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P ++SVP +YE +Y+ I + ++ + + RAL+ ++ A + + +
Sbjct: 284 PTVLVSVPRIYERVYALIMQHRASAGS----IERALLDLTIAVGGRRF---------DAR 330
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
Q ++L+D L WPL ++LV K+ + +G + VSGG + +
Sbjct: 331 QGRGALSLLDRL--------AWPL---LKQLVADKVLAQLGGRLRVAVSGGAPIAEPVIR 379
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
+ A+G+ + GYG+TE+SPV++ P N SVGH ++ E ++ E +E+L
Sbjct: 380 LFLALGLDILQGYGMTETSPVVSVNTPEDNDPRSVGHVLDGVEARL--GENDELL----- 432
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
VRG VM GY+ P T++ + DGWL+TGD ++R G + + GR
Sbjct: 433 ----VRGPSVMLGYWHKPEETRRVKEADGWLHTGD-----------QARIENGRITITGR 477
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
KD +V STGE + P++LE A L L Q +V+G+ + A++V + + + +RL+
Sbjct: 478 IKDILVTSTGEKIAPVDLETAILADPLFEQALVVGEQRPFLAALVVLNAKAWVQEKERLA 537
>gi|373456317|ref|ZP_09548084.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371717981|gb|EHO39752.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 592
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 185/383 (48%), Gaps = 55/383 (14%)
Query: 63 LYDIVPAEN------GDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQR 114
++DIV +E D FLS LP H+YER G++ RG + Y + + +D+
Sbjct: 198 VFDIVQSEARLRLRADDVFLSFLPLSHLYERLAGHWCPIYRGATIHYARGIDTVVEDIAV 257
Query: 115 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 174
+P M+SVP +YE + + +Q++ SSA +AR + S G L +
Sbjct: 258 ARPTIMVSVPRLYEKIANAMQEKAEQSSA----LARNIFYWSI----------GTGLEYH 303
Query: 175 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 233
+K+ + V WL R + LAEKLV+ K+++ +G + ++GG L +
Sbjct: 304 EKRRAGKVN--KWLERR---------YRLAEKLVFNKVKAKLGGRFRHPIAGGAPLSVET 352
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
+EAIG+ + GYG+TE+ +IA P GS G PI+ ++KI D
Sbjct: 353 LKIFEAIGLPIIEGYGMTETHLIIALTPPGEVRYGSCGKPIDGIKVKIAD---------- 402
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
G V V G +M+GY+ P TK+ +D++GWL+TGDIG++ + L L
Sbjct: 403 -DGEVLVSGPLLMKGYYNKPDITKEVIDDEGWLHTGDIGYLDEEN----------YLFLT 451
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
R K+ IV S G+N+ P +E S I ++ ++G ++ A++VP E + AK
Sbjct: 452 DRKKNIIVTSGGKNIAPAPIEHKLKTSKYIEEVCLVGDKRKFVSALVVPAYEILKEWAKS 511
Query: 414 LSIVHADASELSKEKTISLLYGE 436
I L K + LY E
Sbjct: 512 NKIDFDSMESLLKNDQVLKLYEE 534
>gi|345428592|ref|YP_004821708.1| hypothetical protein PARA_00020 [Haemophilus parainfluenzae T3T1]
gi|301154651|emb|CBW14110.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 605
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 210/457 (45%), Gaps = 67/457 (14%)
Query: 22 FKVIFITLFFSRRDLPLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKF- 75
F+ F T ++ LF+ + T P M ++ Q+ + +DI N D+
Sbjct: 163 FQAEFETRLANKTMDDLFTIIYTSGTTGEPKGVMLDYNNLAHQLEA-HDIALDVNQDEVS 221
Query: 76 LSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGI 134
LS LP H++ERA ++ RG L Y N +++ L +P +M +VP YE +YS +
Sbjct: 222 LSFLPFSHIFERAWVAYVLHRGAILCYLEDTNQVRETLTEVRPTFMCAVPRFYEKIYSAV 281
Query: 135 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 194
++ + R+++ +A ++ +E L++N+K P +L
Sbjct: 282 LDKVQKAPFIRQMI------FHWAIAVGQKRFE--LLSQNKKVPFFL------------- 320
Query: 195 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 253
+ LA+KLV K++S +G K GG L I LF+ +IG+ +++GYG+TE+
Sbjct: 321 ---QKRYALADKLVLSKLRSLLGGRIKMMPCGGAKLEPTIGLFFHSIGINIKLGYGMTET 377
Query: 254 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 313
+ I+ S+G + + E+KI E NE+L VRG VM+GY+K P
Sbjct: 378 TATISCWDDHHFNPNSIGKLMPNAEVKI--GENNEIL---------VRGGMVMKGYYKKP 426
Query: 314 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 373
T QA EDG+L TGD G G L + R K+ + S G+ + P +
Sbjct: 427 EETAQAFTEDGFLKTGDAGEFDAE----------GNLFITDRIKELMKTSNGKYIAPQYI 476
Query: 374 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK------- 426
E + I QI +I ++ A+IVP + V AK+L+I + D EL K
Sbjct: 477 EGKIGKDKFIEQIAIIADAKKYVSALIVPCFDSVEEYAKKLNIKYQDRMELLKHSEIIKM 536
Query: 427 -EKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVNF 462
EK I L EL + Q+ ++ + F+V
Sbjct: 537 FEKRIESLQKELAHFE-----QVKKFTLLSQAFSVKL 568
>gi|397689621|ref|YP_006526875.1| long-chain-fatty-acid-CoA ligase [Melioribacter roseus P3M]
gi|395811113|gb|AFN73862.1| long-chain-fatty-acid-CoA ligase [Melioribacter roseus P3M]
Length = 636
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 188/381 (49%), Gaps = 49/381 (12%)
Query: 78 MLPPW-HVYERACG-YFIFSRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVY 127
++ PW H + G Y + G +E T + LK+ +++ +P +++SVP +
Sbjct: 222 LILPWDHAFAHTAGIYTLMYNGASMAAVETGRTPLETLKNIPKNIKEIKPTFLLSVPALA 281
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
+ I+K I + + +++++ Y A EG+ +++
Sbjct: 282 KNFRKNIEKGIREKGKRIEQLFNSALKLAYNYNA-----EGWNRGNGKRK---------- 326
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQV 246
+L PL+ L +K+++ KI+ G GGG+L + + F+ AIG+ +
Sbjct: 327 --------LLKPLYKLYDKILFSKIRENFGGRLEFFIGGGALLDIELQRFFYAIGIPMFQ 378
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE++P+I+A P + LGS G +++ E+KI D+ +E LPAG KG + VRG VM
Sbjct: 379 GYGLTEAAPIISANVPAKHKLGSSGRIVDNLEVKICDSNGSE-LPAGQKGEIVVRGENVM 437
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY+KN AT + + +DGWL +GD+G++ G L + GR K ++ S GE
Sbjct: 438 VGYWKNEKATAETI-KDGWLYSGDLGYLDED----------GFLYVLGRFKSLLIASDGE 486
Query: 367 NVEPLELEEAALRSS-LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 425
P +EEA +S I Q+++ A+IVP+KE++ ++ H SE
Sbjct: 487 KYSPEGIEEALTENSKFIEQVMLYNNQSPYTIALIVPNKEQIKRFLDENNLSH--KSEEG 544
Query: 426 KEKTISLLYGELRKWTSKCSF 446
+ I L+ E+ K+ F
Sbjct: 545 QNAVIKLIDEEISKFKQGGQF 565
>gi|371776873|ref|ZP_09483195.1| amp-dependent synthetase and ligase [Anaerophaga sp. HS1]
Length = 635
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 183/376 (48%), Gaps = 48/376 (12%)
Query: 76 LSMLPPWHVYERACGYFIFS-RGIEL--------MYTAVRNLKDDLQRYQPHYMISVPLV 126
L++LP H + + F RG + ++N +++ +PH ++SVP +
Sbjct: 220 LAVLPWDHAFAHTAALYAFMYRGASIASVQAGKTQLETLKNFAQNIREIKPHVLMSVPAI 279
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
+ I+K + A+ V L R++ Y + Y G R
Sbjct: 280 AKNFRKNIEKGVM----AKGKVIYTLFRVAMKYAVW---YNGTGNNR------------- 319
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQ 245
+ + + +PL+ L + L++K I++ G + GGG+L + + F+ AIG+ +
Sbjct: 320 ---GKGLKKLTYPLYYLFDNLIFKTIRANFGGNLQFFIGGGALLDIELQKFFYAIGIPMY 376
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGL+E+SP+I+A P + +GS G +N+ +IKI D E+ + LP G G + ++G V
Sbjct: 377 QGYGLSEASPIISANTPAHHKMGSSGRTVNNLDIKICD-ESGKALPPGQSGEIVIKGENV 435
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
M GY+KN ATK+ + ++GWL TGD+G++ G L + GR K ++ S G
Sbjct: 436 MLGYWKNEEATKETI-KNGWLYTGDLGYLDKD----------GYLYVLGRFKSLLISSDG 484
Query: 366 ENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 424
E P +EEA + LI Q V+ +IVP+ E+V+ K LS + E
Sbjct: 485 EKYSPEGIEEAVIDHCELIDQCVLHNNQNPYTIGLIVPNAEKVVQYFKSLS--NHLTKEQ 542
Query: 425 SKEKTISLLYGELRKW 440
EKT+ + EL ++
Sbjct: 543 KLEKTLLAIQEELSQF 558
>gi|354610157|ref|ZP_09028113.1| Long-chain-fatty-acid--CoA ligase [Halobacterium sp. DL1]
gi|353194977|gb|EHB60479.1| Long-chain-fatty-acid--CoA ligase [Halobacterium sp. DL1]
Length = 644
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 184/367 (50%), Gaps = 49/367 (13%)
Query: 74 KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ +S LP HV ER G+F+ F+ G + Y + L++D QP SVP VYE L+
Sbjct: 255 RVVSYLPLAHVLERLAGHFLMFASGAHVCYAESPDTLQEDFGLVQPTSGTSVPRVYEKLF 314
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+++Q S R+ +A + YE A
Sbjct: 315 DAVREQATESPTKERI-------FEWAVDVGREYYE----------------------AD 345
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
+L +A++LV++K++ A+G + + +SGGGSL + Y IG+ + GYGL
Sbjct: 346 DPGLVLRGKRAVADRLVFEKVRDALGGNVEFFISGGGSLSPELCALYHGIGLPILEGYGL 405
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKI---VDAETNEVLPAGSKGIVKVRGSQVMQ 307
TE+SPV++ +G++G P+ T++++ V + + AG G + VRG QV
Sbjct: 406 TETSPVVSVNPAEEPKVGTIGPPVPGTDLELDESVASPEQQERTAGRAGELLVRGPQVFD 465
Query: 308 GYFKNPSATKQA-LDEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
GY++ P AT++A ++ DG W TGD+ I R G V LE RAK + LST
Sbjct: 466 GYWELPEATEEAFVERDGQEWFRTGDVVEI---------REDGYVRFLE-RAKQLLTLST 515
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASE 423
G+NV P +E+A S L+ Q +V+G +Q+ AI+VP+ + V A + V AD +E
Sbjct: 516 GKNVAPGPIEDAFAASPLVEQAMVVGDEQKFVSAIVVPNFDGVRRWAHNEDVDVPADDAE 575
Query: 424 LSKEKTI 430
L ++ +
Sbjct: 576 LCRDDRV 582
>gi|300784352|ref|YP_003764643.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|384147618|ref|YP_005530434.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|399536237|ref|YP_006548899.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|299793866|gb|ADJ44241.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|340525772|gb|AEK40977.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|398317007|gb|AFO75954.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
Length = 598
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 167/351 (47%), Gaps = 53/351 (15%)
Query: 59 QIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRY 115
+IR+ + P E G+ L LP HV RA + + L +T V+NL DL +
Sbjct: 208 EIRADIEAFPQLMEQGNSLLCFLPLAHVLARAIAVTALTARVTLGHTPDVKNLVADLGTF 267
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
+P ++++VP V+E +Y+ +++ + + A ++++ K G L
Sbjct: 268 RPTFVVAVPRVFEKVYNSAKQKAHSEGKGKIFDAAEATAVAYSEAQDKG---GAGLGLQL 324
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHID 234
K HL+ +KLVY K+++A+G A VSGG L +
Sbjct: 325 K------------------------HLVFDKLVYGKLRAALGGRCVAAVSGGAPLGARLA 360
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ IGV V GYGLTE+S T +G+VG P+N T ++I D
Sbjct: 361 HFFRGIGVPVFEGYGLTETSAAANVNTQTAFRVGTVGKPVNGTSVRIAD----------- 409
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
G V ++G V + Y+ NP ATK+AL DGW +TGD+G + P G L + G
Sbjct: 410 DGEVLLKGDVVFRAYYNNPQATKEAL-TDGWFHTGDLGELDPD----------GFLKITG 458
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
R K+ IV + G+NV P LE+ S L+ Q +V+G + A++ D+E
Sbjct: 459 RKKEIIVTAGGKNVAPSGLEDTIKASPLVSQAMVVGDQRPFIAALVTVDEE 509
>gi|269127261|ref|YP_003300631.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM
43183]
gi|268312219|gb|ACY98593.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM
43183]
Length = 605
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 161/338 (47%), Gaps = 49/338 (14%)
Query: 69 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYE 128
A G L LP HV+ R GI L ++ + NL DL ++P ++++VP V+E
Sbjct: 219 AMEGSSTLLFLPLAHVFARLIQVACIESGIVLGHSDIPNLLPDLASFKPTFLLAVPRVFE 278
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+G +++ + A A I+++ G L +K
Sbjct: 279 KVYNGAEQKAIAGGKGKIFKAAADTAIAYSKALDAPGGPGLGLKLKRK------------ 326
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
+ + LVY+K++ A+G K VSGG +L + F+ +G+ + G
Sbjct: 327 --------------VFDLLVYRKLREAVGGQVKYAVSGGAALGERLGHFFRGVGIVILEG 372
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTE++ ++ RP+ +G+VG P+ ++I D G + V+G VMQ
Sbjct: 373 YGLTETTAPVSVNRPSALRVGTVGQPVPGVTVRIAD-----------DGEILVKGVNVMQ 421
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+ N +ATK+A+ EDGW +TGDIG + G L + GR K+ +V + G+N
Sbjct: 422 GYWANETATKEAI-EDGWFHTGDIG----------TMDADGFLKITGRKKEILVTAGGKN 470
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
V P LE+ LI Q VVIG ++ A+I D E
Sbjct: 471 VAPAPLEDRLRAHPLISQCVVIGDGRKFISALITLDNE 508
>gi|319941890|ref|ZP_08016211.1| hypothetical protein HMPREF9464_01430 [Sutterella wadsworthensis
3_1_45B]
gi|319804543|gb|EFW01413.1| hypothetical protein HMPREF9464_01430 [Sutterella wadsworthensis
3_1_45B]
Length = 613
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 193/411 (46%), Gaps = 52/411 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
+ + D V D +LS LP H +ER ++ + G + + +V+++++DL Q
Sbjct: 214 NVAQISDAVDITESDIYLSFLPFSHTFERTVAHYAALAHGASMAFARSVQHIENDLADVQ 273
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M +VP V E LY Q ++ S + R +A A R FC
Sbjct: 274 PTIMCTVPRVLERLYQKQQLELAKGSEVEQ------HRSQWAAEAGWR---RFCRDNGLP 324
Query: 177 -QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
+PS AL + + L +L E V +K++ G KA + GG SL +
Sbjct: 325 VEPSAREALDETV-----------LPVLDED-VGRKVRGLFGGRMKAILCGGASLNQSVA 372
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
++ A+GV ++ YGLTE+SP+++ R N VG P+ T++++ G
Sbjct: 373 RYFCAMGVPLRQVYGLTETSPIVSLTRAEMNHPACVGQPVAQTQVRL-----------GD 421
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+ ++V+G QVMQGY+ P+ TK A EDGW +TGD ++ GG + ++G
Sbjct: 422 RDELQVKGPQVMQGYWNKPAETKHAFTEDGWFHTGDQADLSD----------GGRVRIKG 471
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV--PDKEEVLMAAK 412
R K+ IV STGE + P++LE A L Q+ V G+++ A++V PD + L A
Sbjct: 472 RIKEIIVTSTGEKIAPVDLEFAIQEDPLFEQVFVCGENRPFISAVLVLQPDLWKALCAEM 531
Query: 413 RLSIVHADASELSKEKTISLLYGELRKWTSK-CSFQIG-PIHVVDEPFTVN 461
LS D L + L +R S+ I I VVDEPFT
Sbjct: 532 ELSA--DDPQTLHDRSMLRYLVKRVRAAAKDFPSYGIPRSIAVVDEPFTAE 580
>gi|313125292|ref|YP_004035556.1| amp-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
gi|448287112|ref|ZP_21478328.1| amp-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
gi|312291657|gb|ADQ66117.1| AMP-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
gi|445572858|gb|ELY27388.1| amp-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
Length = 677
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 169/370 (45%), Gaps = 60/370 (16%)
Query: 65 DIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMIS 122
D+ NG LS LP HV ER G+F+ F+ G + Y + L++D Q +P S
Sbjct: 258 DVPTLTNGMVTLSFLPLAHVLERLAGHFLMFASGACVAYAESPDTLREDFQLVRPTVGTS 317
Query: 123 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 182
VP VYE LY I+ + S +R+ +A + +E P
Sbjct: 318 VPRVYEKLYDAIRSEASKSPTKKRI-------FEWAVDVGREYHE-------SDSPG--- 360
Query: 183 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 241
IL H LA+KLV+ +++ A+G + +SGGGSL + Y +G
Sbjct: 361 ------------VILSAKHALADKLVFDQVREALGGRIEFFISGGGSLSAELCALYHGMG 408
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVK 299
+ + GYGLTE+SPVIA P +G++G P+ E+K+ +V G G +
Sbjct: 409 LPILEGYGLTETSPVIAVNPPEEPKIGTIGTPVVDVEVKLDKTVVGDVTGDAGGDVGELL 468
Query: 300 VRGSQVMQGYFKNPSATKQALDED----------------GWLNTGDIGWIAPHHSRGRS 343
V+G V +GY+ P T A +D GW TGD+ + P
Sbjct: 469 VKGPNVTEGYWNRPEETAAAFTDDVPSDANGESESEGDSGGWFRTGDVVELRPD------ 522
Query: 344 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
G + RAK +VLSTG+NV P +E++ S ++ Q +V+G ++ A+IVP
Sbjct: 523 ----GYIAFRERAKQILVLSTGKNVAPGPIEDSFASSDVVEQCMVLGDGRKFVSALIVPS 578
Query: 404 KEEVLMAAKR 413
EE+ A R
Sbjct: 579 FEEIREWADR 588
>gi|325577823|ref|ZP_08148098.1| long-chain-fatty-acid--CoA ligase [Haemophilus parainfluenzae ATCC
33392]
gi|325160568|gb|EGC72694.1| long-chain-fatty-acid--CoA ligase [Haemophilus parainfluenzae ATCC
33392]
Length = 605
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 200/423 (47%), Gaps = 54/423 (12%)
Query: 22 FKVIFITLFFSRRDLPLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKF- 75
F+ F T ++ LF+ + T P M ++ Q+ + +DI N D+
Sbjct: 163 FQAEFETRLANKAMDDLFTIIYTSGTTGEPKGVMLDYSNLAHQLEA-HDIALDVNQDEVS 221
Query: 76 LSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGI 134
LS LP H++ERA ++ RG L Y N +++ L +P +M +VP YE +YS +
Sbjct: 222 LSFLPFSHIFERAWVAYVLHRGAILCYLEDTNQVREALTEVRPTFMCAVPRFYEKIYSAV 281
Query: 135 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 194
++ + R+++ +A ++ ++ L++N+K P +L
Sbjct: 282 LDKVQKAPFIRQMI------FHWAIAVGQKRFD--LLSQNKKVPFFL------------- 320
Query: 195 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 253
+ LA+KLV K++S +G K GG L I LF+ +IG+ +++GYG+TE+
Sbjct: 321 ---QKRYALADKLVLSKLRSLLGGRIKMMPCGGAKLEPTISLFFHSIGINIKLGYGMTET 377
Query: 254 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 313
+ ++ S+G + + E+KI E NE+L VRGS VM+GY+K P
Sbjct: 378 TATVSCWDDHHFNPSSIGKLMPNAEVKI--GENNEIL---------VRGSMVMKGYYKKP 426
Query: 314 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 373
T QA EDG+L TGD G G L + R K+ + S G+ + P +
Sbjct: 427 EETAQAFTEDGFLKTGDAGEFDAE----------GNLFITDRIKELMKTSNGKYIAPQYI 476
Query: 374 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 433
E + I QI +I ++ A+IVP + V AK+L+I + D EL K I +
Sbjct: 477 EGKIGKDKFIEQIAIIADAKKYVSALIVPCFDSVEEYAKKLNIKYQDRMELLKHSEIIKM 536
Query: 434 YGE 436
+ +
Sbjct: 537 FEQ 539
>gi|448739566|ref|ZP_21721578.1| AMP-dependent synthetase and ligase [Halococcus thailandensis JCM
13552]
gi|445799185|gb|EMA49566.1| AMP-dependent synthetase and ligase [Halococcus thailandensis JCM
13552]
Length = 653
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 178/374 (47%), Gaps = 59/374 (15%)
Query: 76 LSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G +F+F+ G + Y + + +D++ QP SVP +YE ++
Sbjct: 263 LSFLPLAHVFERLAGHFFLFASGATVAYAESADTVAEDIRTVQPTTATSVPRIYERIFDS 322
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
+++ S+ RR+ RA+ A KR T + P +
Sbjct: 323 MREDA-DSAIRRRIFERAV-------AAAKR-------TSRRDDPGRTLRF--------- 358
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
LA++LVY ++ A+G + + +SGGGSL + ++ + + + GYGLTE
Sbjct: 359 ------ERALADRLVYSTVKEAMGGNIEFFISGGGSLSPELARLFDGMDLPIYEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------GSKGIVKVRGSQVM 306
++PV++ P G++G + E ++ DA VLPA G G + VRG V
Sbjct: 413 AAPVVSVNPPEAPKPGTLGPALTGVETRL-DAS---VLPADQYDRDGDVGELLVRGPNVT 468
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY++NP T ++DGWL TGDI R G V R K +VLSTG+
Sbjct: 469 DGYWENPEETDADFEDDGWLRTGDIV----------ERDVDGYFVYHERLKQLLVLSTGK 518
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
NV P +E+A S + Q +V+G D++ A++VP+ E + A R ++ EL
Sbjct: 519 NVAPGPIEDAFATSERVEQAMVLGDDEKFVSALVVPNFEGLRAWAARKNV------ELPS 572
Query: 427 EKTISLLYGELRKW 440
E+ R+W
Sbjct: 573 ERAALCRDENAREW 586
>gi|420151040|ref|ZP_14658193.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394751223|gb|EJF35022.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 599
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 189/374 (50%), Gaps = 48/374 (12%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYE 128
+N D L+ LP HV+ERA YF + + + Y NL ++ L +P M +VP YE
Sbjct: 220 DNTDTSLAFLPLSHVFERAWTYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYE 279
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+++ + + SS V R L R++ A KR+ L K+PS+
Sbjct: 280 KIFATVHDRADASS----FVKRKLFRLAIA--TGKRV---LALREQGKKPSF-------- 322
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
+L + L +K+VYKK++ A+G K GG +L I F+++IG+ +++G
Sbjct: 323 -------VLQKAYNLFDKMVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLG 375
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++ I+ SVG+ + + +++I E NE+L V+G VM+
Sbjct: 376 YGMTETTATISCWGDDRINPQSVGNVMPNVQVRI--GEENEIL---------VKGGMVMK 424
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+KNP T +A DG+L TGD G + +++ L + R K+ + S G+
Sbjct: 425 GYYKNPEETAKAFTPDGYLRTGDAGNLDGNNN----------LFITERIKELMKTSNGKY 474
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + +LI QI VI ++ A+IVP+ E + A K L++ + + +++ K
Sbjct: 475 IAPQMIEGKVGKYNLIEQIAVIADGKKFVSALIVPNYEMLSQALKDLNLKYKNTADMIKH 534
Query: 428 -KTISLLYGELRKW 440
+ I + +L+K+
Sbjct: 535 SQVIEYIGKQLQKF 548
>gi|300710198|ref|YP_003736012.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|448297030|ref|ZP_21487078.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|299123881|gb|ADJ14220.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|445580212|gb|ELY34598.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
Length = 647
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 169/346 (48%), Gaps = 47/346 (13%)
Query: 67 VPAENGD-KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISV 123
+PA +G+ + +S LP HV ER G+F+ F+ G + Y + L++D Q +P SV
Sbjct: 253 LPAIDGETRTVSFLPLAHVLERTAGHFLMFASGAAVAYAESPDTLQEDFQAVRPTTGTSV 312
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P VYE +Y I+ Q S RR+ A + + AY + PS
Sbjct: 313 PRVYEKIYDAIRSQASESDLRRRIFEWA-VDVGKAY---------------HRDPS---- 352
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
+L +A+KLV+ +++ A+G + +SGGGSL + Y +G+
Sbjct: 353 ---------PGPVLTGKQAIADKLVFSQVKEALGGEIEFLISGGGSLSAELCALYHGMGM 403
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI---VDAETNEVLPAGSKGIVK 299
+ GYGLTE+SPVI+ +G++G P+ E ++ V E G G +
Sbjct: 404 PILEGYGLTETSPVISVNPIEAPEIGTIGPPLPDVEARVDASVVGEAQRRDADGEVGELL 463
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
VRG V +GY++N AT ++ ED W TGD+ I P +V RAK
Sbjct: 464 VRGPNVTRGYWRNEEATAESFTED-WFRTGDVVEIRPDD----------YVVFRERAKQI 512
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
IVLSTG+NV P +E+A S L+ Q V+G ++ A++VP+ E
Sbjct: 513 IVLSTGKNVAPGPIEDAFAASELVEQCFVMGDGRKFISALVVPNVE 558
>gi|54307638|ref|YP_128658.1| long-chain-fatty-acid-CoAligase [Photobacterium profundum SS9]
gi|46912061|emb|CAG18856.1| putative long-chain-fatty-acid-CoAligase [Photobacterium profundum
SS9]
Length = 604
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 47/363 (12%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYE 128
+ GD L LP HV+ERA +++ RG I T LK+ L +P+ M +VP VYE
Sbjct: 217 DEGDSSLCFLPLSHVFERAWTFYVLHRGAINHYLTDTNQLKEALADVKPNVMAAVPRVYE 276
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+YS + ++ + R+++ ++A R+ C + +QPS L+ +
Sbjct: 277 KIYSTVHDKVSRAPFHRKLI------FTWAVNMGARM--AVC-HQEHRQPSKLLTMS--- 324
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
H LA KLV K++ +G + K GG L I F+ AIG+ V++G
Sbjct: 325 ------------HNLANKLVLSKLRDILGGNIKFMPCGGAKLDEGIGRFFHAIGINVKLG 372
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++ ++ C S+G + EIKI E NE+L VRG VM+
Sbjct: 373 YGMTETTATVSCWDDQCFNPDSIGMAMPGAEIKI--GENNEIL---------VRGPMVMR 421
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+ P T + EDG+L TGD G G L + R K+ + S G+
Sbjct: 422 GYYNMPEETAKNFTEDGFLKTGDAGHFDEQ----------GNLFITDRIKELMKTSGGKY 471
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E A + I QI VI ++ A+IVP + + A+ L+I + D EL K
Sbjct: 472 IAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDTLEEHARELNIKYKDRLELVKN 531
Query: 428 KTI 430
I
Sbjct: 532 SQI 534
>gi|256820350|ref|YP_003141629.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
gi|256581933|gb|ACU93068.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
Length = 599
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 189/374 (50%), Gaps = 48/374 (12%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYE 128
+N D L+ LP HV+ERA YF + + + Y NL ++ L +P M +VP YE
Sbjct: 220 DNTDTSLAFLPLSHVFERAWTYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYE 279
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+++ + + SS V R L R++ A KR+ L K+PS+
Sbjct: 280 KIFATVHDRADASS----FVKRKLFRLAIA--TGKRV---LALREQGKKPSF-------- 322
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
+L + L +K+VYKK++ A+G K GG +L I F+++IG+ +++G
Sbjct: 323 -------VLQKAYNLFDKMVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLG 375
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++ I+ SVG+ + + +++I E NE+L V+G VM+
Sbjct: 376 YGMTETTATISCWGDDRINPQSVGNVMPNVQVRI--GEENEIL---------VKGGMVMK 424
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+KNP T +A DG+L TGD G + +++ L + R K+ + S G+
Sbjct: 425 GYYKNPEETAKAFTPDGYLRTGDAGNLDGNNN----------LFITERIKELMKTSNGKY 474
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + +LI QI VI ++ A+IVP+ E + A K L++ + + +++ K
Sbjct: 475 IAPQMIEGKVGKYNLIEQIAVIADGKKFVSALIVPNYEMLSQALKDLNLKYKNTADMIKH 534
Query: 428 -KTISLLYGELRKW 440
+ I + +L+K+
Sbjct: 535 SQVIEYIGKQLQKF 548
>gi|333029389|ref|ZP_08457450.1| Long-chain-fatty-acid--CoA ligase [Bacteroides coprosuis DSM 18011]
gi|332739986|gb|EGJ70468.1| Long-chain-fatty-acid--CoA ligase [Bacteroides coprosuis DSM 18011]
Length = 601
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 187/401 (46%), Gaps = 51/401 (12%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVP 124
+V + D L+ LP HV+ER Y SRG+++ V ++++ ++ +P M SVP
Sbjct: 216 LVDITDKDISLNFLPLTHVFERGWVYICVSRGVQVCINLVPQDIQIAIKEIRPTLMCSVP 275
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+E +Y G++ +I +S + + +++ + R K+P ++ L
Sbjct: 276 RFWEKVYLGVKDKIDNTSGPMKQLMLNAVKVGREH--------NLNYIRLGKKPPRMLHL 327
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGV 242
+ EK V + ++ IGI + G +LP+ + F A+G+
Sbjct: 328 ---------------KYKFYEKTVMQLLKKTIGIENGNFFPTAGAALPVEVAEFVYAVGI 372
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 302
V GYGLTES+ ++ T +GSVG +++ ++KI D +E+L ++G
Sbjct: 373 NVITGYGLTESTATVSCTWKTHFQIGSVGQVLDNVQVKIGDE--SEIL---------LKG 421
Query: 303 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
+ QGY+K P AT QA DGW +TGDIG++ G L + GR KD
Sbjct: 422 KTITQGYYKKPDATAQAFTADGWFHTGDIGYMK-----------DGELYMTGRLKDLFKT 470
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 422
S G+ + P LE + I QI +I ++ A+IVP +V AK I +A+
Sbjct: 471 SNGKYIAPQALETRLVIDQFIDQIALIADQRKFVSALIVPVYSKVEEYAKEHGIQYANLD 530
Query: 423 ELSKEKTISLLY-GELRKWTSKCSF--QIGPIHVVDEPFTV 460
EL I +Y G + + ++ QI ++ EPF++
Sbjct: 531 ELLTHPQILQMYKGRIDTLQQQFAYYEQIKHFTLLKEPFSM 571
>gi|284163671|ref|YP_003401950.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
gi|284013326|gb|ADB59277.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
Length = 652
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 172/359 (47%), Gaps = 51/359 (14%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
+S LP HV+ER G+F+ F+ G + Y + L++D P SVP VYE +Y G
Sbjct: 262 MSYLPLAHVFERTAGHFVLFASGSCIAYAESPDTLQEDFSAVGPTTATSVPRVYEKIYDG 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q S A R++ A + AY Q+ S
Sbjct: 322 IREQASESGAKRKIFEWA-TDVGVAY---------------QRADS-------------P 352
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
IL LA+KLV+ ++ A+G +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 353 GPILRAKQALADKLVFSTVREALGGEIDLLISGGGSLSPELCQLYHAMGLPIFEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIK----IVDAETNEVLPAGSKGIVKVRGSQVMQG 308
++PV++ P +G++G +++ +++ + D E + P G G + V G V +G
Sbjct: 413 TAPVVSTNPPDATKIGTIGPALSNVDLRVDETVADQEAFDGDP-GEVGELLVAGPNVTEG 471
Query: 309 YFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
Y+ P AT+ A D+DG W TGDI + P G L R K IVLST
Sbjct: 472 YWNKPGATQGAFTEDDDGERWFRTGDIVHLRPD----------GYLEFRDRLKQLIVLST 521
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
G+NV P +E+A S ++ Q +V+G ++ GA++VP+ V A I D E
Sbjct: 522 GKNVAPGPIEDAFAASEVVEQAMVVGDGEKFIGALLVPNTAHVREWADEEGIDLPDDPE 580
>gi|254492052|ref|ZP_05105229.1| AMP-binding enzyme, putative [Methylophaga thiooxidans DMS010]
gi|224462749|gb|EEF79021.1| AMP-binding enzyme, putative [Methylophaga thiooxydans DMS010]
Length = 599
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 179/381 (46%), Gaps = 56/381 (14%)
Query: 64 YDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMI 121
++I P D FLS LP H ER GY++ G + Y+ + L DD+Q +P +I
Sbjct: 218 FEIFP---NDLFLSFLPLSHTLERTAGYYLPIMAGASVAYSRGIPQLADDMQMVKPTILI 274
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRI--SFAYTAFKRIYEGFCLTRNQKQPS 179
+VP ++E +YS +Q Q+ + V++R L ++ S ++ FK + + +P
Sbjct: 275 AVPRIFERIYSRLQAQL----DQKPVISRFLFQLTCSTGWSKFK-----YQQGKQGWRPG 325
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 238
+ L L K+V +K+ +G + VSGG LP +
Sbjct: 326 F------------------SLLPLLNKIVAQKVHQRMGGQVRLAVSGGAPLPFQAAKLFI 367
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+G+ + GYGLTE+SPVI+ P N SVG I +KI D +E+L
Sbjct: 368 GLGLNLLQGYGLTETSPVISVNEPANNDPTSVGRAIPGVAVKIGD--NDELL-------- 417
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
VRG M GY+ N AT QA++ +GWL+TGD I + + + GR KD
Sbjct: 418 -VRGPGNMMGYWNNHKATAQAINAEGWLHTGDQAKIDDNDH----------IHITGRIKD 466
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
+VLS GE V P ++E A Q +++G+ + A+IV + ++ AK L +
Sbjct: 467 ILVLSNGEKVPPSDMESAIQSGEYFEQALIVGEGESYLSALIVLNTDKWFSLAKELGLDA 526
Query: 419 ADASELSKEKTISLLYGELRK 439
D S L + + +LR+
Sbjct: 527 MDNSSLESKNLHQFVIQKLRQ 547
>gi|76802721|ref|YP_330816.1| long-chain-fatty-acid--CoA ligase [Natronomonas pharaonis DSM 2160]
gi|76558586|emb|CAI50178.1| acyl-CoA synthetase [Natronomonas pharaonis DSM 2160]
Length = 651
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 175/365 (47%), Gaps = 50/365 (13%)
Query: 65 DIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMIS 122
D+ + D+ LS LP HV+ER G+F+ F G + Y + + DD+Q +P S
Sbjct: 256 DLPAIDERDRVLSFLPLAHVFERVAGHFLMFGSGATVSYAESTDTVADDIQIVKPTGASS 315
Query: 123 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 182
VP VYE +Y ++ + A V RA + I+ + N + P +
Sbjct: 316 VPRVYERIYDSLRDE-----APEAVFNRA-VPIARQWA-------------NTESPGLGL 356
Query: 183 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 241
L + L +KLVY ++ +G + + VSGGGSL + ++ +G
Sbjct: 357 KL---------------KYKLMDKLVYSSVREQMGGNIEFFVSGGGSLSKQLAELFDGMG 401
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI---VDAETNEVLPAGSKGIV 298
+ + GYGLTE+SPV++ P G++G P+++ E+++ V ++ + G G +
Sbjct: 402 IPILEGYGLTETSPVVSVNPPEDYRSGTLGPPLSNVEVRLDETVVSDDQKANADGDIGEL 461
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
V+G V +GY+ P AT++A +DGW TGDI + L+ R K
Sbjct: 462 HVKGPNVTEGYWNRPGATEEAFTQDGWFRTGDI----------IEQTDDDYLIYHDRLKQ 511
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
IVL TG+N+ P +E+ S I Q +VIG +Q+ A+ VP+ E V A + I
Sbjct: 512 LIVLDTGKNIAPQPIEDEFATSERIDQAMVIGDNQKFIAALFVPNLEAVERWADKEGIDL 571
Query: 419 ADASE 423
D SE
Sbjct: 572 PDDSE 576
>gi|429757066|ref|ZP_19289623.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429169713|gb|EKY11454.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 599
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 188/374 (50%), Gaps = 48/374 (12%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYE 128
+N D L+ LP HV+ERA YF + I + Y NL ++ L +P M +VP YE
Sbjct: 220 DNTDTSLAFLPLSHVFERAWTYFCLYKAITVYYLDDTNLVREALAEVRPTLMCAVPRFYE 279
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+++ + + SS V R L R++ A KR+ L K+PS+
Sbjct: 280 KIFATVHDRADASS----FVKRKLFRLAIA--TGKRV---LALREQGKKPSF-------- 322
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
+L + L +K+VYKK++ A+G K GG +L I F+++IG+ +++G
Sbjct: 323 -------VLQKAYNLFDKMVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLG 375
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++ I+ SVG+ + + +++I E NE+L V+G VM+
Sbjct: 376 YGMTETTATISCWGDDRINPQSVGNVMPNVQVRI--GEENEIL---------VKGGMVMK 424
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+KNP T +A DG+L TGD G + +++ L + R K+ + S G+
Sbjct: 425 GYYKNPEETAKAFTPDGYLRTGDAGNLDGNNN----------LFITERIKELMKTSNGKY 474
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + +LI QI VI ++ A+IVP+ E + A K L+I + +++ K
Sbjct: 475 IAPQMIEGKVGKYNLIEQIAVIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKH 534
Query: 428 -KTISLLYGELRKW 440
+ I + +L+K+
Sbjct: 535 SQVIEYIGKQLQKF 548
>gi|78186834|ref|YP_374877.1| long-chain fatty-acid-CoA ligase [Chlorobium luteolum DSM 273]
gi|78166736|gb|ABB23834.1| long-chain fatty-acid-CoA ligase [Chlorobium luteolum DSM 273]
Length = 610
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 199/409 (48%), Gaps = 54/409 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQ 116
++S +I+ + D LS LP H YER GY++ F+ G + + ++ + ++ +
Sbjct: 211 NVKSAAEIIRIDETDCSLSFLPLSHAYERTGGYYLLFACGASIYLAESIETVSLNITEAR 270
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAAR-RVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
P + +VP +++ + + +QKQI T S + ++ A+ R + + ++ +
Sbjct: 271 PTIIFTVPRLFDRIRTNMQKQISTESPLKQKIFNWAVSRGEHYHRSIEK----------K 320
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
S L+ L H +A KLVY+K++ G + VSGG +LP
Sbjct: 321 GSASPLLTL---------------QHAVAGKLVYQKVKKRFGGRLRYFVSGGAALPQKTG 365
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F++A+G+ + G+GLTE+SP+ RP G+VG + + E+KI AE EVL
Sbjct: 366 EFFQALGITILEGFGLTETSPITNVNRPEKVKFGTVGPTVANVEMKI--AEDGEVL---- 419
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
RG +M+GY+++ AT + + DGW ++GDIG I G L +
Sbjct: 420 -----FRGPNIMKGYWQDREATAEVI-RDGWFHSGDIGEI----------DGDGYLKITD 463
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R K IV S G+N+ P+ +E + + Q++V+G+ + A+IVPD +++ A
Sbjct: 464 RKKHIIVTSGGKNIAPMPIENLIAENPYVDQVMVVGEKRPFLIALIVPDFQKLREFAASA 523
Query: 415 SIVHADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 460
I D + L K I +Y +L + S+ ++ + EPFT+
Sbjct: 524 GITAPDDAGLCAHKEIVQIYEKLLRSISRQLATHEKVRRFILAKEPFTI 572
>gi|160899186|ref|YP_001564768.1| AMP-dependent synthetase/ligase [Delftia acidovorans SPH-1]
gi|160364770|gb|ABX36383.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 647
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 186/399 (46%), Gaps = 54/399 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H +ER GY++ + G + Y +V L +DL+ +P ++SVP +YE +
Sbjct: 252 DVFLSFLPLSHTFERTAGYYLALAVGACVAYARSVAQLAEDLKTQRPTVLVSVPRIYERV 311
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN----QKQPSYLVALID 186
++ + + +ARA ++ A R ++ FC T+ Q + +
Sbjct: 312 HAKVME----------TLARAPLKAQLFELAQARGWQRFCETQGIADAQAPQPEVPGWMQ 361
Query: 187 WLWARIICAILWPL--HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKV 244
WL WP+ HL+A+ L+ + G + VSGG L I + +G+ +
Sbjct: 362 WL--------PWPVLNHLVAKPLLAQ----FGGRVRVAVSGGAPLSPTIARCFLGLGLPL 409
Query: 245 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 304
GYG+TE+SPV+ A N +VGH + E++I G ++VRG
Sbjct: 410 IQGYGMTETSPVVCANTLEDNHPATVGHALPGVEVRI-----------GENRELQVRGPC 458
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
VM+GY++ P T + +DGWL TGD I GR R ++GR K+ IV ST
Sbjct: 459 VMRGYWERPEDTAKTFTDDGWLRTGDQAVI----EDGRVR-------IQGRIKEIIVTST 507
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 424
GE + P +LE A Q+ V+G+D+ A+ V ++ E A+RL + D L
Sbjct: 508 GEKIPPADLELAITGDPFFTQVFVVGEDRPFIAAVAVIERGEWQTMARRLGLDPEDPKSL 567
Query: 425 SKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 461
+ + K + + P +H+ EP+T+
Sbjct: 568 NHSAAEREALARIEKQVASFARYAVPRAVHLELEPWTIE 606
>gi|90411921|ref|ZP_01219929.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium profundum
3TCK]
gi|90327179|gb|EAS43551.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium profundum
3TCK]
Length = 604
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 47/363 (12%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYE 128
+ GD L LP HV+ERA +++ RG I T LK+ L +P+ M +VP VYE
Sbjct: 217 DEGDTSLCFLPLSHVFERAWTFYVLHRGAINHYLTDTNQLKEALAEVKPNVMAAVPRVYE 276
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+YS + ++ + R++V ++A R+ C + +QPS L+ +
Sbjct: 277 KIYSTVHDKVSRAPFHRKLV------FTWAVNMGARM--AVC-HQEHRQPSKLLTMS--- 324
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
H LA K+V K++ +G + K GG L I F+ AIG+ V++G
Sbjct: 325 ------------HNLANKVVLSKLRDILGGNIKFMPCGGAKLDESIGRFFHAIGINVKLG 372
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++ ++ C S+G + EIKI E NE+L VRG VM+
Sbjct: 373 YGMTETTATVSCWDDQCFNPDSIGMAMPGAEIKI--GENNEIL---------VRGPMVMR 421
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+ P T + EDG+L TGD G G L + R K+ + S G+
Sbjct: 422 GYYNMPEETAKNFTEDGFLKTGDAGHFDEQ----------GNLFITDRIKELMKTSGGKY 471
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E A + I QI VI ++ A+IVP + + A+ L+I + D EL K
Sbjct: 472 IAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDTLEEHARELNIKYHDRLELVKN 531
Query: 428 KTI 430
I
Sbjct: 532 SQI 534
>gi|448354726|ref|ZP_21543481.1| AMP-dependent synthetase and ligase [Natrialba hulunbeirensis JCM
10989]
gi|445637057|gb|ELY90213.1| AMP-dependent synthetase and ligase [Natrialba hulunbeirensis JCM
10989]
Length = 673
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 173/367 (47%), Gaps = 61/367 (16%)
Query: 67 VPAENGDKFL-SMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISV 123
VP+ + D L S LP HV+ER G+F+ F+ G + Y + LK+D Q QP SV
Sbjct: 254 VPSIDQDSTLVSYLPLAHVFERTAGHFLLFAAGATVAYAESSDTLKEDFQAVQPTGATSV 313
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P VYE +Y I++Q S R+ ++A + Y+
Sbjct: 314 PRVYEKIYDTIREQATESPVKERI-------FNWATDVSREYYQ---------------- 350
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
A AIL +A+KLV+ K++ A+G + + VSGGGSL + Y +G+
Sbjct: 351 ------ADDPGAILEFKLSVADKLVFSKVKEALGGNIEMLVSGGGSLSPELCQLYHGMGL 404
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVK 299
+ GYGLTE+SPV+ P +G+VG I ++ + D+ + + G G +
Sbjct: 405 PIFEGYGLTETSPVVTTNPPEEPKIGTVGPAIIDCDVTVDDSIVPDGDAANTPGETGELL 464
Query: 300 VRGSQVMQGYFKNPSATKQA-------LDEDG--------WLNTGDIGWIAPHHSRGRSR 344
VRG V QGY+ P AT +A +DED W TGDI I P
Sbjct: 465 VRGPNVTQGYWNKPEATDRAFTEHAPGVDEDDAGGEDKGKWFRTGDIVTIRPDD------ 518
Query: 345 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 404
+ R K +VLSTG+NV P +E+A L+ Q +V+G ++ GA++VP+
Sbjct: 519 ----YIEFHERTKQLVVLSTGKNVAPAPIEDAFASKELVEQCMVVGDGEKFVGALLVPNI 574
Query: 405 EEVLMAA 411
+ + AA
Sbjct: 575 DAIKRAA 581
>gi|330998740|ref|ZP_08322468.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
gi|329576237|gb|EGG57753.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
Length = 615
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 197/413 (47%), Gaps = 67/413 (16%)
Query: 63 LYDIVPAENGDKFLSMLPPWHVYERACGYFI---------FSRGIELMYTAVRNLKDDLQ 113
LY+I P + D +LS LP H +ER Y+I FSRG V + DDL+
Sbjct: 222 LYNIAPNPS-DTWLSFLPLSHTFERTTSYYIGLGMGNKVTFSRG-------VARILDDLK 273
Query: 114 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 173
+P M+SVP V+E + + I +++ A R+V A + Y FC
Sbjct: 274 LVRPSIMMSVPRVFEKVAAKINERLKQKGAVSRLVFNAAVDAG---------YRNFCRCN 324
Query: 174 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
S + A D L + L +KLV +I+++ G + VSGG +L
Sbjct: 325 GLPVDSAVPAAFDRL-----------MDPLYDKLVRNQIKNSFGGRMRVAVSGGAALSPE 373
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
+ +G+++ GYG+TE+SP+I+ + N +VG + E K+ E +E+L
Sbjct: 374 VAKTIIGLGIEIFQGYGMTETSPIISVNKIEANHPDTVGPILEGIEAKL--GEKDELL-- 429
Query: 293 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 352
VRG QVM+GY+K P T + LD +GWL+TGD I P G L +
Sbjct: 430 -------VRGPQVMRGYWKRPEDTFKTLDPEGWLSTGDQADILP----------GNYLKI 472
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 412
+GR K+ IV STGE V P+++E+A L Q +V G ++ ++V +K+
Sbjct: 473 KGRIKEIIVTSTGEKVPPVDIEQAIETDPLFDQAMVYGDNRPFIVGLLVLNKDNFERFVV 532
Query: 413 RLSIVHADASELSKEKTISLLYGELRKWTSKC-SF-QIG---PIHVVDEPFTV 460
L++ D L+ + I + L++ + C SF Q G + ++ EP+T+
Sbjct: 533 SLNLDPKDPEILTNKAVIREI---LKRIKTACKSFPQYGVPRSVLLLKEPWTI 582
>gi|393780659|ref|ZP_10368867.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608113|gb|EIW90975.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 599
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 189/374 (50%), Gaps = 48/374 (12%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYE 128
+N D L+ LP HV+ERA YF + + + Y NL ++ L +P M +VP YE
Sbjct: 220 DNTDTSLAFLPLSHVFERAWTYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYE 279
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+++ + + SS V R L R++ A KR+ L K+PS+
Sbjct: 280 KIFATVHDRADASS----FVKRKLFRLAIA--TGKRV---LTLREQGKKPSF-------- 322
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
+L + L +K+VYKK++ A+G K GG +L I F+++IG+ +++G
Sbjct: 323 -------VLQKAYNLFDKMVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLG 375
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++ I+ SVG+ + + +++I E NE+L V+G VM+
Sbjct: 376 YGMTETTATISCWGDDRINPQSVGNVMPNVQVRI--GEENEIL---------VKGGMVMK 424
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+KNP T +A DG+L+TGD G + +++ L + R K+ + S G+
Sbjct: 425 GYYKNPEETAKAFTPDGYLHTGDAGNLDGNNN----------LFITERIKELMKTSNGKY 474
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + +LI QI VI ++ A+IVP+ E + A K L+I + +++ K
Sbjct: 475 IAPQMIEGKVGKYNLIEQIAVIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKH 534
Query: 428 -KTISLLYGELRKW 440
+ I + +L+K+
Sbjct: 535 SQVIEYIGKQLQKF 548
>gi|332876876|ref|ZP_08444630.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332685159|gb|EGJ58002.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 597
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 188/376 (50%), Gaps = 48/376 (12%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYE 128
++ D LS LP HVYERA F + I + Y NL ++ L +P M +VP YE
Sbjct: 218 DDTDSSLSFLPLTHVYERAWTSFCLYKAIVVYYLEDTNLVREALAEVRPTLMCAVPRFYE 277
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+++ + + SS A+R++ + ++ +R+ L ++PS+L
Sbjct: 278 KIFATVHDKADASSFAKRMLFKLAVKTG------RRV---LTLKEQNRKPSFL------- 321
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
L + +K+VY K+++ +G K GG +L I F+++IG+ V++G
Sbjct: 322 --------LKKAYNFFDKMVYTKLKAVLGGRIKFMPCGGANLEPSIGRFFQSIGINVKLG 373
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++ ++ L SVG + + +++I E NE+L V+G VM+
Sbjct: 374 YGMTETTATVSCWGDNRFNLQSVGTLMPNVQVRI--GEDNEIL---------VKGGMVMK 422
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+KNP T +A DG+L TGD G I +++ L + R K+ + S G+
Sbjct: 423 GYYKNPEETAKAFTPDGFLRTGDAGKIDENNN----------LFITERIKELMKTSNGKY 472
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + +LI QI VI ++ A+IVP+ E + A K L+I + + ++L K
Sbjct: 473 IAPQLIEGKVGKYNLIEQIAVIADGKKFVSALIVPNYEILTQAFKDLNIKYKNTADLIKH 532
Query: 428 -KTISLLYGELRKWTS 442
+ I + +L+K+ S
Sbjct: 533 SQVIEYIGKQLQKFQS 548
>gi|429747308|ref|ZP_19280584.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429163446|gb|EKY05672.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 599
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 188/374 (50%), Gaps = 48/374 (12%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYE 128
+N D L+ LP HV+ERA YF + + + Y NL ++ L +P M +VP YE
Sbjct: 220 DNTDTSLAFLPLSHVFERAWTYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYE 279
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+++ + + SS V R L R++ A KR+ L K+PS+
Sbjct: 280 KIFATVHDRADASS----FVKRKLFRLAIA--TGKRV---LALREQGKKPSF-------- 322
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
+L + L +K+VYKK++ A+G K GG +L I F+++IG+ +++G
Sbjct: 323 -------VLQKAYNLFDKMVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLG 375
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++ I+ SVG+ + + +++I E NE+L V+G VM+
Sbjct: 376 YGMTETTATISCWGDDRINPQSVGNVMPNVQVRI--GEENEIL---------VKGGMVMK 424
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+KNP T +A DG+L TGD G + +++ L + R K+ + S G+
Sbjct: 425 GYYKNPEETAKAFTPDGYLRTGDAGNLDGNNN----------LFITERIKELMKTSNGKY 474
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + +LI QI VI ++ A+IVP+ E + A K L+I + +++ K
Sbjct: 475 IAPQMIEGKVGKYNLIEQIAVIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKH 534
Query: 428 -KTISLLYGELRKW 440
+ I + +L+K+
Sbjct: 535 SQVIEYIGKQLQKF 548
>gi|228471964|ref|ZP_04056732.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228276576|gb|EEK15289.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 597
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 193/400 (48%), Gaps = 60/400 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETL 130
G+ LS LP HVYER ++ +G+ Y N + + L+ +PHYM VP + E +
Sbjct: 220 GNVSLSFLPLSHVYERMWVAYVLHKGVINCYLDDTNRVAEVLKEVRPHYMCVVPRLLEKI 279
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ I + + S +R+V RI A R +G K+PS+L
Sbjct: 280 YTKIYENVEKQSVLKRLVFATATRI--AKIQLGRKKKG-------KKPSFL--------- 321
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYG 249
L + +A+++V++K+++A+G + + GG+L I F+ AIGV V +GYG
Sbjct: 322 ------LQKAYNVADRVVFQKLKAALGGNIQMIPCGGALLEPSIGRFFRAIGVNVTLGYG 375
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
+TE++ ++ L SVG + + ++KI E NE+L ++G + +GY
Sbjct: 376 MTETTATVSCWDDHKFKLKSVGTLVPNMQVKI--GENNEIL---------LKGGSITKGY 424
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ NP +A EDG+L TGD G+I G L + R K+ + S G+ +
Sbjct: 425 YNNPEENAKAFTEDGFLRTGDAGYIDKE----------GNLFITERIKELMKTSNGKYIA 474
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--- 426
P ++E + S I QI +I ++ A+IVP+ + + AK L++ + + +EL K
Sbjct: 475 PQQIEGKVGKDSFIEQIAIIADARKYVSALIVPNYDALAEYAKSLNLKYKNYAELIKNSQ 534
Query: 427 -----EKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
+K + L EL + QI ++ PF++N
Sbjct: 535 IVEFFQKRLQNLQQELASYE-----QIKKFTLLTTPFSIN 569
>gi|350561364|ref|ZP_08930203.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781471|gb|EGZ35779.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 630
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 194/410 (47%), Gaps = 62/410 (15%)
Query: 65 DIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMIS 122
D V + D+ LS LP H ER GY+ S GI Y +V L +DL + +P +I+
Sbjct: 238 DAVAVSSADRLLSFLPLSHTLERTVGYYAAVSAGIATAYARSVTRLAEDLVQVRPTILIA 297
Query: 123 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE-GFC-LTRNQKQPSY 180
VP V+E +++ I + +S RR + F R E G+ Q++ +
Sbjct: 298 VPRVFERMHARILGHVSAASPTRRRL-------------FDRAQELGWRRFLHAQRRGRW 344
Query: 181 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 239
AL+ LH L + +V ++++ +G + +SGG LP + F+ A
Sbjct: 345 SPALL--------------LHPLLDPVVGARVRARLGGRLRFAISGGAPLPEAVGRFFIA 390
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
GV V GYGLTE+SPVIA R N +VG + E++I E +E+
Sbjct: 391 CGVPVLQGYGLTETSPVIAVNRLEDNEPATVGPALPGVEVRI--GEHDELC--------- 439
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
R VM GY+ + AT+ ALD DGWL+TGD I P G + + GR KD
Sbjct: 440 TRSPSVMAGYWNDRHATRAALDADGWLHTGDQARIGPR----------GHITITGRLKDI 489
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
+VLS GE V P ++E+A + + Q++VIG+ + A++V + A+ + A
Sbjct: 490 LVLSNGEKVAPADVEQALAGTPWVEQVMVIGEGRPFLAALVVLRAGALPGLARAAGLDPA 549
Query: 420 DASELSKEKTI----SLLYGELRKWTSKCS-----FQIGPIHVVDEPFTV 460
A+ +T+ +++ L+ + + Q+ +VDEP+TV
Sbjct: 550 PAATHDGARTLRRKPAVVAEVLKALQPRLAQFPGYLQLRAAVLVDEPWTV 599
>gi|333914694|ref|YP_004488426.1| long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
gi|333744894|gb|AEF90071.1| Long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
Length = 647
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 186/399 (46%), Gaps = 54/399 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H +ER GY++ + G + Y +V L +DL+ +P ++SVP +YE +
Sbjct: 252 DVFLSFLPLSHTFERTAGYYLALAVGACVAYARSVAQLAEDLKTQRPTVLVSVPRIYERV 311
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN----QKQPSYLVALID 186
++ + + +ARA ++ A R ++ FC T+ Q + +
Sbjct: 312 HAKVME----------TLARAPLKAQLFELAQARGWQRFCETQGIADAQAPQPEVPGWMQ 361
Query: 187 WLWARIICAILWPL--HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKV 244
WL WP+ HL+A+ L+ + G + VSGG L I + +G+ +
Sbjct: 362 WL--------PWPVLNHLVAKPLLAQ----FGGRVRVAVSGGAPLSPTIARCFLGLGLPL 409
Query: 245 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 304
GYG+TE+SPV+ A N +VGH + E++I G ++VRG
Sbjct: 410 IQGYGMTETSPVVCANTLEDNHPATVGHALPGVEVRI-----------GENRELQVRGPC 458
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
VM+GY++ P T + +DGWL TGD I GR R ++GR K+ IV ST
Sbjct: 459 VMRGYWERPEDTAKTFTDDGWLRTGDQAVI----EDGRVR-------IQGRIKEIIVTST 507
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 424
GE + P +LE A Q+ V+G+D+ A+ V ++ E A+RL + D L
Sbjct: 508 GEKIPPADLELAITGDPFFTQVFVVGEDRPFIAAVAVIERGEWQAMAQRLGLDPEDPKSL 567
Query: 425 SKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 461
+ + K + + P +H+ EP+T+
Sbjct: 568 NHSAAEREALARIEKQVASFARYAVPRAVHLELEPWTIE 606
>gi|417321242|ref|ZP_12107782.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
gi|328471922|gb|EGF42799.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
Length = 602
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 55/390 (14%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYET 129
GD L LP HV+ERA +++ +G Y ++D L +P M +VP YE
Sbjct: 218 QGDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEK 277
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S I +++ + R+++ F + C + +++PS +
Sbjct: 278 IFSAIHEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKRKPSMM-------- 320
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GY
Sbjct: 321 -------LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGY 373
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ I+ C S+G + ++KI E NE+L VRG VM+G
Sbjct: 374 GMTETTATISCWDDKCFDPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRG 422
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T++ DE G+L TGD G I + G L + R K+ + S G+ +
Sbjct: 423 YYKMPEETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYI 472
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-- 426
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 473 APQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHH 532
Query: 427 ------EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 533 QVVEMLEKRVNELQKELAKFEQVKKFKLLP 562
>gi|289581785|ref|YP_003480251.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|448282809|ref|ZP_21474091.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|289531338|gb|ADD05689.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|445575424|gb|ELY29899.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
Length = 672
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 169/368 (45%), Gaps = 60/368 (16%)
Query: 65 DIVPAENGDKFL-SMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMI 121
D VP + D L S LP HV+ER G+F+ F+ G + Y + LK+D Q QP
Sbjct: 252 DDVPTIDQDSTLVSYLPLAHVFERTAGHFLLFAAGATVAYAESSDTLKEDFQAVQPTGAT 311
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
SVP VYE +Y I++Q S R+ ++A + Y + P
Sbjct: 312 SVPRVYEKIYDTIREQATESPVKERI-------FNWATDVSREYYRA-----DDPGPVLE 359
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
L +A+KLV+ K++ A+G + + VSGGGSL + Y +
Sbjct: 360 FKLS-----------------VADKLVFSKVKEALGGNIEMLVSGGGSLSPELCQLYHGM 402
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGI 297
G+ + GYGLTE+SPV+ P +G+VG I ++ + D+ + + G G
Sbjct: 403 GLPIFEGYGLTETSPVVTTNPPEEPKIGTVGPAIVDCDVTVDDSIVPDGDAASTPGETGE 462
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDG--------------WLNTGDIGWIAPHHSRGRS 343
+ VRG V QGY+ P AT +A E W TGDI I P
Sbjct: 463 LLVRGPNVTQGYWNKPEATDRAFTEHAPGVDEDDDGEDKGKWFRTGDIVTIRPD------ 516
Query: 344 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
G + R K +VLSTG+NV P +E+A L+ Q +V+G ++ GA++VP+
Sbjct: 517 ----GYIEFHERTKQLVVLSTGKNVAPAPIEDAFASKELVEQCMVVGDSEKFVGALLVPN 572
Query: 404 KEEVLMAA 411
+ + AA
Sbjct: 573 IDAIERAA 580
>gi|303257838|ref|ZP_07343848.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
gi|302859441|gb|EFL82522.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
Length = 615
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 197/413 (47%), Gaps = 67/413 (16%)
Query: 63 LYDIVPAENGDKFLSMLPPWHVYERACGYFI---------FSRGIELMYTAVRNLKDDLQ 113
LY+I P + D +LS LP H +ER Y+I FSRG V + DDL+
Sbjct: 222 LYNIAPNPS-DTWLSFLPLSHTFERTTSYYIGLGMGNKVTFSRG-------VARILDDLK 273
Query: 114 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 173
+P M+SVP V+E + + I +++ A R+V A + Y FC
Sbjct: 274 LVRPSIMMSVPRVFEKVAAKINERLKQKGAVSRLVFNAAVDAG---------YRNFCRCN 324
Query: 174 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 232
S + A D L + L +KLV +I+++ G + VSGG +L
Sbjct: 325 GLPVDSAVPAAFDRL-----------MDPLYDKLVRNQIKNSFGGRMRVAVSGGAALSPE 373
Query: 233 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 292
+ +G+++ GYG+TE+SP+I+ + N +VG + E K+ E +E+L
Sbjct: 374 VAKTIIGLGIEIFQGYGMTETSPIISVNKIGANHPDTVGPILEGIEAKL--GEKDELL-- 429
Query: 293 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 352
VRG QVM+GY+K P T + LD +GWL+TGD I P G L +
Sbjct: 430 -------VRGPQVMRGYWKRPEDTFKTLDPEGWLSTGDQADILP----------GNYLKI 472
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 412
+GR K+ IV STGE V P+++E+A L Q +V G ++ ++V +K+
Sbjct: 473 KGRIKEIIVTSTGEKVPPVDIEQAIETDPLFDQAMVYGDNRPFIVGLLVLNKDNFERFVV 532
Query: 413 RLSIVHADASELSKEKTISLLYGELRKWTSKC-SF-QIG---PIHVVDEPFTV 460
L++ D L+ + I + L++ + C SF Q G + ++ EP+T+
Sbjct: 533 SLNLDPKDPEILTNKAVIREI---LKRIKTACKSFPQYGVPRSVLLLKEPWTI 582
>gi|300114859|ref|YP_003761434.1| AMP-dependent synthetase and ligase [Nitrosococcus watsonii C-113]
gi|299540796|gb|ADJ29113.1| AMP-dependent synthetase and ligase [Nitrosococcus watsonii C-113]
Length = 601
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 185/380 (48%), Gaps = 50/380 (13%)
Query: 67 VPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVP 124
P D FLS LP H ER GY++ G ++ YT ++ L +DL +P ++SVP
Sbjct: 219 TPVYEDDVFLSFLPLSHTLERTIGYYLPMMAGAQVAYTRSIAKLAEDLATVKPTVLVSVP 278
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
++E ++ QI+ + + + RAL R++ A G+ +Q +Y
Sbjct: 279 RIFERTHN----QIYDTLQEKNPLERALFRLAVA--------AGW------RQFNYQQGH 320
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
W +C L+ L +++V +++ + G + V GG L ++ A+G+
Sbjct: 321 APW---HPLCL----LNPLLQQIVGRQVLAQFGGRLRIVVCGGAPLAFNVAKELLALGLP 373
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
+ GYGLTE+SPVI+ N SVG P+ EI+I E NE+L S G
Sbjct: 374 LIQGYGLTETSPVISVNHLNNNDPKSVGTPLQDVEIRI--GEHNELL-GHSPG------- 423
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM GY+ NP AT + +DE GWL+TGD ++R G L + GR K+ IVL+
Sbjct: 424 -VMLGYWNNPKATAEVIDEKGWLHTGD-----------QARIEQGRLYITGRIKEIIVLA 471
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
TGE + P E+E A SL Q++VIG+ + A+IV + E A+ L++ A
Sbjct: 472 TGEKIPPGEMETAISTDSLFDQVMVIGEGKPYLSALIVLNPEHWTTLAQELNLDPHQAQS 531
Query: 424 LSKEKTISLLYGELRKWTSK 443
L + + G + + T +
Sbjct: 532 LKHSTVLEEVLGRIEQHTRQ 551
>gi|448356483|ref|ZP_21545216.1| AMP-dependent synthetase and ligase [Natrialba chahannaoensis JCM
10990]
gi|445653516|gb|ELZ06387.1| AMP-dependent synthetase and ligase [Natrialba chahannaoensis JCM
10990]
Length = 674
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 170/370 (45%), Gaps = 62/370 (16%)
Query: 65 DIVPAENGDKFL-SMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMI 121
D VP + D L S LP HV+ER G+F+ F+ G + Y + LK+D Q QP
Sbjct: 252 DDVPCIDQDSTLVSYLPLAHVFERTAGHFLLFAAGATVAYAESSDTLKEDFQAVQPTGAT 311
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
SVP VYE +Y I++Q S R+ ++A + Y+
Sbjct: 312 SVPRVYEKIYDTIREQATESPVKERI-------FNWATNVSREYYQ-------------- 350
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
A AIL +A+KLV+ K++ A+G + + VSGGGSL + Y +
Sbjct: 351 --------ADDPGAILEFKLSVADKLVFSKVKEALGGNIEMLVSGGGSLSPELCQLYHGM 402
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGI 297
G+ + GYGLTE+SPV+ P +G+VG I ++ + D+ + + G G
Sbjct: 403 GLPIFEGYGLTETSPVVTTNPPEEPKIGTVGPAIVDCDVTVDDSIVPDGDATSTPGETGE 462
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDG----------------WLNTGDIGWIAPHHSRG 341
+ VRG V QGY+ P AT +A E W TGDI I P
Sbjct: 463 LLVRGPNVTQGYWNKPEATDRAFTEHAPGVDEDEDGDSEDKGKWFRTGDIVTIRPDD--- 519
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
+ R K +VLSTG+NV P +E+A L+ Q +V+G ++ GA++V
Sbjct: 520 -------YIEFHERTKQLVVLSTGKNVAPAPIEDAFASKGLVEQCMVVGDGEKFVGALLV 572
Query: 402 PDKEEVLMAA 411
P+ + + AA
Sbjct: 573 PNIDAIERAA 582
>gi|448409765|ref|ZP_21574892.1| long-chain fatty-acid-CoA ligase [Halosimplex carlsbadense 2-9-1]
gi|445672536|gb|ELZ25108.1| long-chain fatty-acid-CoA ligase [Halosimplex carlsbadense 2-9-1]
Length = 663
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 179/370 (48%), Gaps = 46/370 (12%)
Query: 74 KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ +S LP HV+ER G+F+ F+ G + Y + L +DLQ P SVP VYE ++
Sbjct: 269 RTISFLPLAHVFERLAGHFLMFASGATVGYAESPDTLPEDLQLLSPTTGASVPRVYERIF 328
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+++Q S+A R+ A+ + R D+ A
Sbjct: 329 DNMREQASDSAAKERIFEWAV-----------------GVAR------------DYARAE 359
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
A+L LA++LVY ++ +G + VSGGGSL + + +G+ + GYGL
Sbjct: 360 DPGAVLGAKRSLADRLVYSTVKERMGGEIEFLVSGGGSLSQELAEMFLGMGIPIVEGYGL 419
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVD-AETNEVLP--AGSKGIVKVRGSQVMQ 307
TE++PV++ P G++G P+ + ++ + A ++ P AG G ++V G V
Sbjct: 420 TETAPVLSVNPPEAIRPGTMGPPVTDVDARVDESAVGDDQFPTAAGPVGELEVAGPNVTD 479
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+ P+ T EDG+ TGDI I P G L + R K IVLSTG+N
Sbjct: 480 GYWNMPAETDATFTEDGYFVTGDIVEITPE----------GFLRYKDRLKQLIVLSTGKN 529
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 426
V P +E+ S + Q++V+G +++ GA++VP+ E V A R I + AD +
Sbjct: 530 VAPEPIEDRFATSDRVDQVMVVGDERKFVGAVVVPNFEAVRRWADREGIDLPADDEAVCA 589
Query: 427 EKTISLLYGE 436
++ + GE
Sbjct: 590 DERVREWVGE 599
>gi|86159308|ref|YP_466093.1| AMP-dependent synthetase/ligase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775819|gb|ABC82656.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 633
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 170/366 (46%), Gaps = 48/366 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLY 131
D+ + LP HVYER Y++F G E Y A +++ + +P M+SVP +YE +
Sbjct: 240 DRSICFLPLSHVYERLWSYYVFRSGAENDYLADPKDVVACMPELRPTAMVSVPRLYEKIC 299
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ + +I +SA RR + R + + Y ++ R + P L+AL
Sbjct: 300 AAVLDRIGKASAPRRALFRWAMAVGKEYGHRRK-------ARRRAGP--LLAL------- 343
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGL 250
H +A+ LV KI+ +G K S GG+ L ++ F+ A G+ + GYGL
Sbjct: 344 --------RHRVADALVLSKIRDVVGGEKNFFSAGGAPLSQEVEEFFFAAGLLICQGYGL 395
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE+SP++ P G+VG P+ E++I A+ E+L RG VM+GY+
Sbjct: 396 TETSPMLTCNAPGAFKFGTVGRPVLDCELRI--AKDGEIL---------ARGGNVMKGYY 444
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
+ P+ T A EDGW TGD+G+I G L + R KD I+ S G+N+ P
Sbjct: 445 RRPAETAAAF-EDGWFKTGDVGFIDDE----------GFLHITDRIKDLIITSGGKNIAP 493
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + + V+G + A++VP + A+ I A EL I
Sbjct: 494 QHIEAMFGSEPYVEHVAVLGDRRNYVSALVVPAFPVLEQHAREHGIGFASREELVSRPEI 553
Query: 431 SLLYGE 436
LY E
Sbjct: 554 VALYQE 559
>gi|193212756|ref|YP_001998709.1| AMP-dependent synthetase and ligase [Chlorobaculum parvum NCIB
8327]
gi|193086233|gb|ACF11509.1| AMP-dependent synthetase and ligase [Chlorobaculum parvum NCIB
8327]
Length = 609
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 193/408 (47%), Gaps = 53/408 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQ 116
++S ++ + D LS LP H YER GY++ F+ G + + ++ + ++ +
Sbjct: 211 NVKSCSTVIRLDETDSSLSFLPLSHAYERTGGYYLMFACGARIYLAESIETISLNIMEAK 270
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + +VP +++ + + + K + + + + Y ++ EG
Sbjct: 271 PTIIFTVPRLFDRMKANMLKAVAKEGGLKEKIFYWAVSTGEKY--HNQLAEG-------- 320
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ I+ H LA+KLVY K++ G + VSGG +LP
Sbjct: 321 ---------------KVSPIVNVQHKLADKLVYHKLREKFGGRLRYFVSGGAALPQKTGE 365
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+++IG+ + G+GLTE+SPV RP G+VG P+ + E++I A+ E+L
Sbjct: 366 FFQSIGITILEGFGLTETSPVTNVNRPENVKFGTVGPPVKNVEVRI--AQDGEIL----- 418
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
++G +M+GY+K+ AT + + +DGW TGDIG I G L + R
Sbjct: 419 ----LKGPNIMKGYWKDDEATAEVI-KDGWFYTGDIGEI----------DADGYLKITDR 463
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K IV S G+N+ PL +E L S + Q +V+G+ + A+IVPD +++ A
Sbjct: 464 KKHIIVTSGGKNIAPLPIENLILESPYVDQTMVVGEKRPFLIALIVPDFQKLSEFASEHQ 523
Query: 416 IVHADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 460
I EL + K + +Y +L + S+ ++ +V+E F++
Sbjct: 524 ITAGSNKELIEAKEVIKVYEQLLRTVSRQLATHEKVRKFLLVEEAFSI 571
>gi|378822222|ref|ZP_09845037.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
gi|378598964|gb|EHY32037.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
Length = 620
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 186/391 (47%), Gaps = 46/391 (11%)
Query: 55 MTNFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDL 112
++N Q L I P+E+ + LS LP H +ER Y++ G + ++ NL DDL
Sbjct: 215 LSNLQ-GVLKSIQPSES-ETLLSFLPLSHTFERTASYYLALGLGFTCAFNRSIANLADDL 272
Query: 113 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 172
+ +P ++SVP VYE ++ ++ A + + R + + A ++R FC
Sbjct: 273 KTIRPTIIMSVPRVYEMIHG----KVMDGLAKKPPMVRRIFNWAVA-VGWRR----FCRE 323
Query: 173 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 231
++ +D A + +K V K ++ A G +SGG +LP
Sbjct: 324 NGLPVEPSALSFLDPFVAGFL-----------DKKVGKTLRDAFGDRIHLFISGGAALPT 372
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
++ + A+GV + GYG+TE+SP+I+ RP N +VG + + E+++ D +
Sbjct: 373 NVAKVFLALGVPIFQGYGMTETSPIISVNRPGSNHPNTVGPALANIEVRLGDGDE----- 427
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
++VRG VM+GY+ P AT++ ED WL TGD+G I + G R
Sbjct: 428 ------IQVRGPSVMKGYWNRPEATREIFTEDDWLRTGDVGEI---YKDGHIR------- 471
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
+ GR K+ IV STGE V P +LE A L Q +V+G D+ A+ V ++
Sbjct: 472 ITGRIKEIIVTSTGEKVPPTDLEAAVTTDRLFTQCMVVGDDRPFISALCVVNEGPWAALC 531
Query: 412 KRLSIVHADASELSKEKTISLLYGELRKWTS 442
+ L + D + L K++ + ++ TS
Sbjct: 532 EELGLDPNDPASLDKKEAKAAALRRIKAATS 562
>gi|448666528|ref|ZP_21685173.1| long-chain fatty-acid-CoA ligase [Haloarcula amylolytica JCM 13557]
gi|445771659|gb|EMA22715.1| long-chain fatty-acid-CoA ligase [Haloarcula amylolytica JCM 13557]
Length = 660
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 174/361 (48%), Gaps = 52/361 (14%)
Query: 74 KFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ ++ LP HV+ER G +F+++ G + Y + L DDLQ +P +SVP VYE ++
Sbjct: 264 RSIAFLPLAHVFERLAGHFFMYASGAAVSYAESPDTLADDLQTVEPMTGLSVPRVYERIF 323
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
++ Q S +R+ ++ + + T +
Sbjct: 324 DNMRTQASESPLKKRIFDWSM-----------DVARDYARTDDP---------------- 356
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
IL H LA++LVY ++ +G + + VSGGGSL + + +G+ + GYGL
Sbjct: 357 --GPILTAKHSLADRLVYSTVKERLGGNIEFMVSGGGSLSKTLCETFLGMGLTILEGYGL 414
Query: 251 TESSPVIAARRPTCNVLGSVGHPIN----HTEIKIVDA-ETNEVLPAGSKGIVKVRGSQV 305
TE+SPV+ P G++G P+ H + +VDA E ++V G G + V G V
Sbjct: 415 TETSPVLTVNPPEDVRPGTLGAPLTEVDVHIDTGVVDASEFDDV--TGDVGELLVDGPNV 472
Query: 306 MQGYFKNPSATKQALDE-DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
QGY+ P AT +A E DG W TGDI R L+ R K+ +VL
Sbjct: 473 TQGYWNAPDATTRAFTEIDGTQWFRTGDI----------VERTDDDFLIYHDRLKELLVL 522
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 422
STG+NV P +E+ S + Q++V+G DQ+ GAIIVP+ EE+ A R + D
Sbjct: 523 STGKNVAPQPIEDQFATSDRVDQVMVVGDDQKFVGAIIVPNFEELRRWADREGVDLPDDH 582
Query: 423 E 423
E
Sbjct: 583 E 583
>gi|407648283|ref|YP_006812042.1| acyl-CoA synthetase [Nocardia brasiliensis ATCC 700358]
gi|407311167|gb|AFU05068.1| acyl-CoA synthetase [Nocardia brasiliensis ATCC 700358]
Length = 597
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 155/336 (46%), Gaps = 51/336 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETL 130
G K L LP HV+ RA F + + +T+ L D Y+PH+++SVP V+E +
Sbjct: 223 GKKTLMFLPLAHVFARAVALVAFDAKVIVAHTSDWSTLVDQFGSYRPHFILSVPRVFEKV 282
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
++G +++ + A A I+++ A G L
Sbjct: 283 FNGAKQKAHDGGKGKIFDAAAETAIAYS-EALDNGGAGLVLKLK---------------- 325
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
H L +KLVY K++ A+G A VSGGG L + F+ +GV + GYG
Sbjct: 326 ----------HALFDKLVYSKLRVALGGQCDAAVSGGGPLGARLGHFFRGVGVTIYEGYG 375
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE++ + P +G+VG PI KI AE E+L +RGS V GY
Sbjct: 376 LTETTAAVTVNTPEKIRVGTVGRPIEGHSAKI--AEDGELL---------LRGSVVFDGY 424
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ N AT+ A DGW TGD+G I G + + GR K+ IV + G+NV
Sbjct: 425 WGNAEATEDAF-ADGWFKTGDLGAI----------DADGFITITGRKKELIVTAGGKNVS 473
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE++ LI Q++V+G Q GA+I D E
Sbjct: 474 PALLEDSLRAHPLISQVMVVGDGQPFIGALITLDPE 509
>gi|317051585|ref|YP_004112701.1| AMP-dependent synthetase and ligase [Desulfurispirillum indicum S5]
gi|316946669|gb|ADU66145.1| AMP-dependent synthetase and ligase [Desulfurispirillum indicum S5]
Length = 611
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 172/370 (46%), Gaps = 59/370 (15%)
Query: 75 FLSMLPPWHVYERACGYFIFSRGIELMYTA-------VRNLKDDLQRYQPHYMISVPLVY 127
FLS LP HV ER GY LMY A V + +++Q +P M+SVP ++
Sbjct: 226 FLSFLPLSHVLERTAGYHA-----PLMYGAHVAFAENVDKVVENIQEIRPTVMVSVPRLF 280
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E +YS I + + + A RR + + + Y ++R E QP
Sbjct: 281 EKIYSRIYENVHQAPAVRRSLFHWAVDVGKQYV-YRRYIE--------NQP--------- 322
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
L + LA++LV+ KI+ G + +SGG L I+ F A+G+ V
Sbjct: 323 ------VGSLGVKYGLAKRLVFSKIKPRFGGRMRFFISGGAPLDKTINEFMWAVGIPVFE 376
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE+SP + N GSVG ++ TE+K AE E+L VRG QVM
Sbjct: 377 GYGLTETSPALTLNTIADNRFGSVGQVLDQTEVKT--AEDGELL---------VRGPQVM 425
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
QGY+KNP AT Q + DGWL TGDI I + G + + R K+ IV + G+
Sbjct: 426 QGYYKNPEATAQTII-DGWLYTGDIARIDEN----------GFVYIVDRKKEIIVTAGGK 474
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
NV P +E I Q V G + A++ P+ E +L A+ + + + +L
Sbjct: 475 NVAPQPIENELKLDKYISQAFVYGDRKPYLVALLTPNVERLLEFAQDKKLNYIEIRDLVT 534
Query: 427 EKTISLLYGE 436
K + L+ E
Sbjct: 535 HKKVHKLFEE 544
>gi|345005903|ref|YP_004808756.1| long-chain-fatty-acid--CoA ligase [halophilic archaeon DL31]
gi|344321529|gb|AEN06383.1| Long-chain-fatty-acid--CoA ligase [halophilic archaeon DL31]
Length = 659
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 180/380 (47%), Gaps = 60/380 (15%)
Query: 67 VPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISV 123
VP + D LS LP HV+ER G+F+ F+ G + Y + L+DD Q +P SV
Sbjct: 260 VPTTDADSVALSFLPLAHVFERLAGHFLQFAVGGTVAYAESSDTLRDDFQLVRPTTTTSV 319
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P VYE LY+ +++Q S R+ + T R Y +P
Sbjct: 320 PRVYEKLYAAVREQASESPIKERIFNWS--------TDVARAYA------KADEPGM--- 362
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
+L H +A+KLV+++++ A+G + VSGGGSL + + +G+
Sbjct: 363 ------------VLSTKHNVADKLVFEQVREAVGGNVDFFVSGGGSLSESLCRLFHGMGI 410
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI------VDAETNEVLPAGSKG 296
+ GYGLTE+SPV++ G++G + E KI VD +T G G
Sbjct: 411 PILEGYGLTETSPVLSVNPYEGAQPGTIGPRVVDVETKIDASVGVVDEDTR-----GDTG 465
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDE-----DGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
+ VRG V GY+ P T +A +E D W TGD+ I P G +
Sbjct: 466 ELLVRGPNVTDGYWAKPDDTARAFEESDDGGDSWFRTGDVVEIQPD----------GYIR 515
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
RAK+ + LSTG+ V P +E+A + LI Q +VIG ++ GA+IVPD E V A
Sbjct: 516 FRERAKEIMKLSTGKMVPPGPIEDAFAENELITQAMVIGDSRKFVGALIVPDAEAVRAWA 575
Query: 412 KRLSI-VHADASELSKEKTI 430
+ + + AD + L +++ +
Sbjct: 576 ESEGVDLPADDAALCRDERV 595
>gi|227495094|ref|ZP_03925410.1| possible long-chain-fatty-acid--CoA ligase [Actinomyces coleocanis
DSM 15436]
gi|226831546|gb|EEH63929.1| possible long-chain-fatty-acid--CoA ligase [Actinomyces coleocanis
DSM 15436]
Length = 631
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 161/334 (48%), Gaps = 50/334 (14%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYS 132
+ L LP HVY R F + G L +T +NL DL+ ++P Y+++VP V E +Y+
Sbjct: 252 RLLLFLPLAHVYARFLEVFQLTGGGVLAHTPDTKNLLHDLESFRPSYLLAVPRVLEKIYN 311
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
++ +S + R + + AY+ EG T
Sbjct: 312 SAEQS--AASGMKLRTFRWAAKTAIAYSRALDTAEGPSKT-------------------- 349
Query: 193 ICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
L H +A+ LVY+K++ + G K +SGGG L + FY +GV V GYGLT
Sbjct: 350 ----LRAQHQMADALVYRKLKDLLGGHCKYVISGGGPLGERLGHFYRGLGVTVLEGYGLT 405
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E++ +A P + +G+VG PI+ +KI D T E+L V+G V +GY
Sbjct: 406 ETTAPLAVNTPRLSKIGTVGPPISTVGVKISD--TGEIL---------VKGPSVFRGYRN 454
Query: 312 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 371
NP AT +A E+GW TGD+G S G L + GRAK+ +V + G+NV P
Sbjct: 455 NPEATAEAF-ENGWFKTGDLG----------SLDRDGYLRITGRAKELLVTAGGKNVSPA 503
Query: 372 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
LE++ L+ Q+VV+G + A++ D E
Sbjct: 504 ALEDSLRAHPLVSQVVVVGDKRPFIAALVTLDAE 537
>gi|302868999|ref|YP_003837636.1| AMP-dependent synthetase and ligase [Micromonospora aurantiaca ATCC
27029]
gi|302571858|gb|ADL48060.1| AMP-dependent synthetase and ligase [Micromonospora aurantiaca ATCC
27029]
Length = 600
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 170/364 (46%), Gaps = 58/364 (15%)
Query: 53 PKMTNFQIRSLY-DIVPA--------ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT 103
PK R++Y DI A G L LP H + R + + +
Sbjct: 195 PKGCVLTHRNIYSDIANAVPVLPNLFRQGASTLLFLPLAHAFARLIQVGVVHARATMAHC 254
Query: 104 A-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 162
A +NL +LQ ++P +++SVP V+E +Y+G +Q S ++ RA +++ A++
Sbjct: 255 ADTKNLVAELQDFKPTFVLSVPRVFEKVYNG-ARQKAESEGKGKIFDRAE-KVAIAWSEA 312
Query: 163 KRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKA 221
+ + G L L H L +KLVY+K+++A+G + +
Sbjct: 313 QELPGGPGLG------------------------LRAQHALFDKLVYRKLRAAMGGLCRD 348
Query: 222 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 281
+SGG L + F+ +GV + GYGLTE+SP AA PT +G+VG P+ I+I
Sbjct: 349 AISGGAPLGARLGHFFRGVGVTICEGYGLTETSPAAAANLPTGTRIGTVGRPLPGVTIRI 408
Query: 282 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
D G V + G V QGY+ N +AT +A+ DGW TGD+G +
Sbjct: 409 DD-----------DGEVLIAGDIVFQGYWHNDAATAEAISTDGWFRTGDLGHLDDD---- 453
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
G L + GR K+ IV + G+NV P LE+ LI Q VV+G Q A++
Sbjct: 454 ------GYLSITGRKKEIIVTAGGKNVAPAVLEDQVRAHPLISQCVVVGDRQPFIAALVT 507
Query: 402 PDKE 405
D+E
Sbjct: 508 IDEE 511
>gi|313205365|ref|YP_004044022.1| amp-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
gi|312444681|gb|ADQ81037.1| AMP-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
Length = 587
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 170/349 (48%), Gaps = 55/349 (15%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQP 117
Q++SL + +PA+ +K LS LP H YER Y G+ + Y ++ + ++++ P
Sbjct: 201 QLKSL-ESIPAKWSNKALSFLPLCHAYERMLVYLYQYLGMSVYYAESLGTIAENIKEINP 259
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
M VP + E +Y +++ S ++ + +F ++ E
Sbjct: 260 TMMSCVPRLLEKIYD----KLYLSGKKLPFFSKIIYYWAFNLATKFQLEE---------- 305
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 236
+ W + + LAEKL+Y K ++AIG + VSGG ++ HI F
Sbjct: 306 -------MGWYYNI--------KYKLAEKLIYSKWRAAIGGNFDIVVSGGSAIQPHIASF 350
Query: 237 YEAIGVKVQVGYGLTESSPVIAA--RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
+ AIG+ V GYGL+E+SPVIA R G+VG P+ E+K+ AE +E++
Sbjct: 351 FSAIGMPVFEGYGLSETSPVIAVSQRGENGRKFGTVGLPLQGVEVKL--AERDEII---- 404
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
RG VM GY+K+P+ T QA+D DGW +TGD G P G L++ G
Sbjct: 405 -----CRGHNVMLGYYKDPALTAQAIDNDGWFHTGDTGKFTPE----------GQLIITG 449
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
R K S G+ V P +E S+ I ++V+G++++ A++ PD
Sbjct: 450 RLKSIFKTSFGKYVNPQAIESRFTESAFIENMIVLGENKKFAAALLSPD 498
>gi|54026677|ref|YP_120919.1| acyl-CoA synthetase [Nocardia farcinica IFM 10152]
gi|54018185|dbj|BAD59555.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length = 597
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 159/337 (47%), Gaps = 51/337 (15%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYET 129
G K L LP HV+ RA F + + +T+ L D ++PH+++SVP V+E
Sbjct: 222 EGKKTLMFLPLAHVFARAVALAAFDAKVIVAHTSDWTTLVDQFGAFKPHFILSVPRVFEK 281
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+++G +++ + A A I ++ + P ++ L
Sbjct: 282 VFNGAKQKAHDGGKGKIFDAAAATAIEYSEA------------LDNGGPGLVLKL----- 324
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
H L +KLVY K+++A+G +A VSGGG L + F+ +GV + GY
Sbjct: 325 ----------KHALFDKLVYSKLKTALGGQCEAAVSGGGPLGARLGHFFRGVGVTIYEGY 374
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTE++ + P +GSVG PI KI AE E+L +RG V G
Sbjct: 375 GLTETTAAFSVNTPEHIRVGSVGRPIEGHAAKI--AEDGELL---------LRGPVVFNG 423
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+ N +AT++A DGW TGD+G I G + + GR K+ IV + G+NV
Sbjct: 424 YWGNEAATEEAF-ADGWFKTGDLGAI----------DADGFITITGRKKEIIVTAGGKNV 472
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE++ LI Q++V+G Q GA+I D E
Sbjct: 473 SPALLEDSLRAHPLISQVMVVGDGQPFIGALITLDPE 509
>gi|451971092|ref|ZP_21924314.1| putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
E0666]
gi|451932908|gb|EMD80580.1| putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
E0666]
Length = 602
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 203/454 (44%), Gaps = 62/454 (13%)
Query: 13 AYMSSFFSMFKVIFITLFFSRRDLPLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIV 67
A+++ + ++V +D L + + T P M ++ Q+ +
Sbjct: 155 AFVAKGDTTYQVELDARLEQAKDDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRL 214
Query: 68 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLV 126
D L LP HV+ERA +++ +G Y ++D L + QP M +VP
Sbjct: 215 SLSQSDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSQVQPTVMCAVPRF 274
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
YE ++S I +++ + R+++ + + A + ++QPS +
Sbjct: 275 YEKIFSAIHEKVSRAPIHRKIMFTWAVNMGAKMAA---------CHQEKRQPSLM----- 320
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKV 244
L + LA+KLV K+++ +G K GG L I F+ AIG+ V
Sbjct: 321 ----------LRKSYALADKLVLSKLRALLG-GKINFMPCGGAKLDETIGRFFHAIGINV 369
Query: 245 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 304
++GYG+TE++ ++ C S+G + ++KI E NE+L VRG
Sbjct: 370 KLGYGMTETTATVSCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPM 418
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
VM+GY+K P T++ DE G+L TGD G+I + G L + R K+ + S
Sbjct: 419 VMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSG 468
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 424
G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D EL
Sbjct: 469 GKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVEL 528
Query: 425 SK--------EKTISLLYGELRKWTSKCSFQIGP 450
K EK ++ L EL K+ F++ P
Sbjct: 529 IKHHQVVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|448731479|ref|ZP_21713779.1| acyl-CoA synthetase [Halococcus saccharolyticus DSM 5350]
gi|445792232|gb|EMA42844.1| acyl-CoA synthetase [Halococcus saccharolyticus DSM 5350]
Length = 645
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 173/364 (47%), Gaps = 47/364 (12%)
Query: 67 VPAENGD-KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISV 123
PA + D + +S LP HV+ER G+F+ F+ G + Y + L++D QP SV
Sbjct: 251 TPAIDTDSEAISFLPLAHVFERLSGHFLMFAAGATVGYAESPDTLQEDFGLLQPTTGASV 310
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P VYE LY I+ Q S+ R+ A + + Y A G R
Sbjct: 311 PRVYEKLYDAIRDQAAESAVRERIFEWA-VDVGRTYQAADSPGIGLRAKRT--------- 360
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
+A++LV+ +++ A+G + + +SGGGSL + + +G+
Sbjct: 361 -------------------VADRLVFSQVREALGGNIEFLISGGGSLSPDLAELFHGMGI 401
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK--- 299
+ GYGLTE++PV++ P +G++G PI+ E++I + L A S G V
Sbjct: 402 PILEGYGLTETAPVVSVNPPEEPEIGTIGPPIHDEEVRIDSTVVADDLAAKSGGEVGELL 461
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
VRG V GY+ P T+ A DGW TGD+ +R G + R+K
Sbjct: 462 VRGPNVTDGYWNRPEETEDAF-RDGWFRTGDV----------VEQRPDGYIAFRERSKQL 510
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
+VLSTG+NV P +E+A + S + Q + IG ++ A+IVP++ V A I +
Sbjct: 511 LVLSTGKNVAPGPIEDAFAQHSAVEQCMAIGDGEKFVSALIVPNEAHVREWADDEGIDLS 570
Query: 420 DASE 423
D S+
Sbjct: 571 DDSQ 574
>gi|398822044|ref|ZP_10580434.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
YR681]
gi|398227329|gb|EJN13561.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
YR681]
Length = 606
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 178/346 (51%), Gaps = 49/346 (14%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
++++ + A D FLS LP H +ER GY+ + G + Y +V L +DL+ +
Sbjct: 214 NVKAIAHRIEAAPDDVFLSFLPLSHTFERTGGYYYPIAAGACVAYARSVPLLSEDLKHVR 273
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P +ISVP +YE +++ I + ++A R + RAL+ ++ A + + +
Sbjct: 274 PTVLISVPRIYERIHALIMQH--RATAGR--IERALLDLTIAVGGRRF---------DAR 320
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
Q +A++D L WPL ++LV K+ + +G + VSGG + +
Sbjct: 321 QGRGTLAVVDRL--------AWPL---LKRLVADKVLAQLGGRLRVAVSGGAPIAEPVIR 369
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
+ A+G+ + GYG+TE+SPV++ P N SVGH ++ E+++ E +E+L
Sbjct: 370 LFIALGLDILQGYGMTETSPVVSVNTPEDNDPRSVGHVLDGVEVRL--GENDELL----- 422
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
VRG VM GY+ P T++ + DGWL+TGD ++R G + + GR
Sbjct: 423 ----VRGPSVMLGYWHKPEETRRVKEADGWLHTGD-----------QARIDNGRITITGR 467
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
KD +V STGE + P++LE A L L Q +V+G+ + A++V
Sbjct: 468 IKDILVTSTGEKIAPVDLETAILADPLFEQALVVGEQRPFVTALVV 513
>gi|448414933|ref|ZP_21577882.1| amp-forming long-chain acyl-CoA synthetase [Halosarcina pallida JCM
14848]
gi|445681630|gb|ELZ34060.1| amp-forming long-chain acyl-CoA synthetase [Halosarcina pallida JCM
14848]
Length = 677
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 168/362 (46%), Gaps = 59/362 (16%)
Query: 72 GDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYET 129
G LS LP HV+ER G+F+ F+ G + Y + L++D +P SVP VYE
Sbjct: 266 GSVTLSFLPLAHVFERLAGHFMMFAAGACVAYAESPDTLREDFGLVRPTTGTSVPRVYEK 325
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
LY I+ Q S RR+ +A + +E
Sbjct: 326 LYDAIRAQASESETKRRI-------FEWAVGVGREYHE---------------------- 356
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
A +L H +A++LV+++++ A+G +SGGGSL + Y A+G+ + GY
Sbjct: 357 ADAPGVLLSAKHRVADRLVFEQVREALGGQIDFFISGGGSLSPDLCALYHAMGLPILEGY 416
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVM 306
GLTE+SPV+A P +G++G P+ E+++ D +V G G + VRG V
Sbjct: 417 GLTETSPVVAVNPPEEPKIGTIGPPVTDVEVRLDDTVVGDVTGEAGGEVGELLVRGPNVT 476
Query: 307 QGYFKNPSATKQALDED---------------GWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
+GY+ P T+ A +D W TGD+ + P G +
Sbjct: 477 EGYWNRPEETEAAFTDDVPGDDASEASEGENGPWFRTGDVVELRPD----------GYVA 526
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
RAK +VLSTG+NV P +E+A S +I Q +V+G ++ A++VP+ + V A
Sbjct: 527 FRERAKQILVLSTGKNVAPGPIEDAFASSDVIEQCMVLGDGRKFVSALVVPNVDGVREWA 586
Query: 412 KR 413
R
Sbjct: 587 DR 588
>gi|53711664|ref|YP_097656.1| long-chain-fatty-acid-CoA ligase [Bacteroides fragilis YCH46]
gi|60679909|ref|YP_210053.1| AMP binding long chain acyl-CoA synthetase [Bacteroides fragilis
NCTC 9343]
gi|265765048|ref|ZP_06093323.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336407849|ref|ZP_08588345.1| hypothetical protein HMPREF1018_00360 [Bacteroides sp. 2_1_56FAA]
gi|375356753|ref|YP_005109525.1| putative AMP binding long chain acyl-CoA synthetase [Bacteroides
fragilis 638R]
gi|383116664|ref|ZP_09937412.1| hypothetical protein BSHG_1256 [Bacteroides sp. 3_2_5]
gi|423248321|ref|ZP_17229337.1| hypothetical protein HMPREF1066_00347 [Bacteroides fragilis
CL03T00C08]
gi|423253270|ref|ZP_17234201.1| hypothetical protein HMPREF1067_00845 [Bacteroides fragilis
CL03T12C07]
gi|423259296|ref|ZP_17240219.1| hypothetical protein HMPREF1055_02496 [Bacteroides fragilis
CL07T00C01]
gi|423263732|ref|ZP_17242735.1| hypothetical protein HMPREF1056_00422 [Bacteroides fragilis
CL07T12C05]
gi|423269687|ref|ZP_17248659.1| hypothetical protein HMPREF1079_01741 [Bacteroides fragilis
CL05T00C42]
gi|423272755|ref|ZP_17251702.1| hypothetical protein HMPREF1080_00355 [Bacteroides fragilis
CL05T12C13]
gi|423282376|ref|ZP_17261261.1| hypothetical protein HMPREF1204_00799 [Bacteroides fragilis HMW
615]
gi|52214529|dbj|BAD47122.1| putative long-chain-fatty-acid-CoA ligase [Bacteroides fragilis
YCH46]
gi|60491343|emb|CAH06091.1| putative AMP binding long chain acyl-CoA synthetase [Bacteroides
fragilis NCTC 9343]
gi|251948055|gb|EES88337.1| hypothetical protein BSHG_1256 [Bacteroides sp. 3_2_5]
gi|263254432|gb|EEZ25866.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301161434|emb|CBW20974.1| putative AMP binding long chain acyl-CoA synthetase [Bacteroides
fragilis 638R]
gi|335944928|gb|EGN06745.1| hypothetical protein HMPREF1018_00360 [Bacteroides sp. 2_1_56FAA]
gi|387776876|gb|EIK38976.1| hypothetical protein HMPREF1055_02496 [Bacteroides fragilis
CL07T00C01]
gi|392657170|gb|EIY50807.1| hypothetical protein HMPREF1067_00845 [Bacteroides fragilis
CL03T12C07]
gi|392660428|gb|EIY54042.1| hypothetical protein HMPREF1066_00347 [Bacteroides fragilis
CL03T00C08]
gi|392700533|gb|EIY93695.1| hypothetical protein HMPREF1079_01741 [Bacteroides fragilis
CL05T00C42]
gi|392706844|gb|EIY99965.1| hypothetical protein HMPREF1056_00422 [Bacteroides fragilis
CL07T12C05]
gi|392708319|gb|EIZ01426.1| hypothetical protein HMPREF1080_00355 [Bacteroides fragilis
CL05T12C13]
gi|404581944|gb|EKA86639.1| hypothetical protein HMPREF1204_00799 [Bacteroides fragilis HMW
615]
Length = 601
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 191/408 (46%), Gaps = 55/408 (13%)
Query: 63 LYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHY 119
++DI + DK +SM LP HV+E+A Y +G+++ + +++ ++ +P
Sbjct: 211 IHDIRLVDMTDKDVSMNFLPLTHVFEKAWTYLCVHKGVQVCINLRPADIQTTIKEIRPTL 270
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
M SVP +E +Y+G+Q++I ++ ++++ I++ RI+ R K P
Sbjct: 271 MCSVPRFWEKVYAGVQEKIAETTGIKKMLMLDAIKVG-------RIH-NLDYLRVGKTPP 322
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFY 237
++ L + EK +Y ++ IGI + G ++P I F
Sbjct: 323 RMIQL---------------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICEFV 367
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
++G+ + VGYGLTES+ ++ T +GSVG + E+KI E NE+L
Sbjct: 368 HSVGIDMLVGYGLTESTATVSCTSKTGYDIGSVGQVMPEVEVKI--GEDNEIL------- 418
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
+RG + +GY+K AT A+DE+GW +TGD G+ G L L R K
Sbjct: 419 --LRGKTITKGYYKKAEATAAAIDEEGWFHTGDAGYFK-----------NGQLYLTERIK 465
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
D S G+ + P LE + I QI +I ++ A+IVP V AK I
Sbjct: 466 DLFKTSNGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKQYAKEKGIE 525
Query: 418 HADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTVN 461
+ D +EL + I+ L+ R T + F QI ++ EPF++
Sbjct: 526 YKDMAELLEHPKITALF-RARIDTLQQQFAHYEQIKRFTLLPEPFSME 572
>gi|456352266|dbj|BAM86711.1| long-chain-fatty-acid-CoA ligase [Agromonas oligotrophica S58]
Length = 623
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 172/346 (49%), Gaps = 48/346 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
+++++ + A+ D FLS LP H +ER GY+ + G + Y +V+ L DDL +
Sbjct: 222 NLKAIHQRLVADGDDVFLSFLPLSHTFERTAGYYYPVAIGASVAYARSVKQLSDDLMEVR 281
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P +ISVP +YE +YS + ++A + RAL+ ++ A + + TR
Sbjct: 282 PTILISVPRIYERIYSVVMHHRAVANA----IERALLDLTIAIGGRRFDAQHGRGTR--- 334
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
++L+D WPL ++LV K+ + G + VSGG + +
Sbjct: 335 -----LSLLD--------RAAWPL---LKRLVADKVLNRFGGRLQVAVSGGAPIAEPVVR 378
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
+ A+G++V GYG+TE+SPV++ P N +VG + E++I G+
Sbjct: 379 LFLALGLEVLQGYGMTETSPVVSVNTPDDNDPRTVGRALPGIEVRI-----------GAN 427
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
+ VRG+ VM Y+ P T + + DGWL+TGD ++R G + + GR
Sbjct: 428 DELMVRGANVMLAYWHRPEETARVKEADGWLHTGD-----------QARIDQGRITITGR 476
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
KD +V STGE + P +LE A L L Q +VIG+++ AI+V
Sbjct: 477 IKDILVTSTGEKIAPADLETAILTDPLFEQAIVIGENRPFLAAIVV 522
>gi|315223493|ref|ZP_07865349.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga ochracea F0287]
gi|420160444|ref|ZP_14667227.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
gi|314946528|gb|EFS98520.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga ochracea F0287]
gi|394760638|gb|EJF43152.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
Length = 599
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 187/374 (50%), Gaps = 48/374 (12%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYE 128
+N D L+ LP HV+ERA YF + + + Y NL ++ L +P M +VP YE
Sbjct: 220 DNTDTSLAFLPLSHVFERAWTYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYE 279
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+++ + + SS V R L R++ A KR+ L K+PS+
Sbjct: 280 KIFATVHDRADASS----FVKRKLFRLAIA--TGKRV---LALREQGKKPSF-------- 322
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
+L + +K+VYKK++ A+G K GG +L I F+++IG+ +++G
Sbjct: 323 -------VLQKAYNFFDKMVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLG 375
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++ I+ SVG+ + + +++I E NE+L V+G VM+
Sbjct: 376 YGMTETTATISCWGDDRINPQSVGNVMPNVQVRI--GEENEIL---------VKGGMVMK 424
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+KNP T +A DG+L TGD G + +++ L + R K+ + S G+
Sbjct: 425 GYYKNPEETAKAFTPDGYLRTGDAGNLDGNNN----------LFITERIKELMKTSNGKY 474
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + +LI QI VI ++ A+IVP+ E + A K L+I + +++ K
Sbjct: 475 IAPQMIEGKVGKYNLIEQIAVIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKH 534
Query: 428 -KTISLLYGELRKW 440
+ I + +L+K+
Sbjct: 535 SQVIEYIGKQLQKF 548
>gi|429753318|ref|ZP_19286127.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429173984|gb|EKY15489.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 636
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 186/374 (49%), Gaps = 48/374 (12%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYE 128
+N D L+ LP HV+ERA +F + + + Y NL ++ L + +P M +VP YE
Sbjct: 257 DNTDSSLAFLPLSHVFERAWTFFCLYKAVTVYYLDDTNLVREALAQVRPTLMCAVPRFYE 316
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+++ + + SS V R L R++ A KR+ L K+PS
Sbjct: 317 KIFATVHDKADASS----FVKRKLFRLAIA--TGKRV---LALREQGKKPSL-------- 359
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
IL + L +KLVYKK++ A+G K GG +L I F+++IG+ +++G
Sbjct: 360 -------ILQKAYNLFDKLVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLG 412
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE+ I+ SVG + + +++I E NE+L V+G VM+
Sbjct: 413 YGMTETVATISCWGDNRINPQSVGEVMPNVQVRI--GEDNEIL---------VKGGMVMK 461
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+KNP T + DG+L TGD G + +++ L + R K+ + S G+
Sbjct: 462 GYYKNPEETAKVFTPDGYLRTGDAGNLDGNNN----------LFITERLKELMKTSNGKY 511
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + +LI QI VI ++ A+IVP+ E + A K L+I + + ++L K
Sbjct: 512 IAPQMIEGKVGKYNLIEQIAVIADGKKFVSALIVPNFEMLSQALKDLNIKYKNTADLIKH 571
Query: 428 -KTISLLYGELRKW 440
+ I + +L+K+
Sbjct: 572 SQVIEYIGKQLQKF 585
>gi|320157490|ref|YP_004189869.1| long-chain-fatty-acid--CoA ligase [Vibrio vulnificus MO6-24/O]
gi|319932802|gb|ADV87666.1| long-chain-fatty-acid-CoA ligase [Vibrio vulnificus MO6-24/O]
Length = 601
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 182/389 (46%), Gaps = 55/389 (14%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETL 130
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE +
Sbjct: 219 NDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSDIKPTVMCAVPRFYEKI 278
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
+S I +++ + R+++ + + + + EG +QPS +
Sbjct: 279 FSAIHEKVSRAPLMRKIMFTWAVNMGAKMSVCHQ--EG-------RQPSLM--------- 320
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYG 249
L H LA+KLV K+++ +G + + GG L I F+ AIG+ V++GYG
Sbjct: 321 ------LKKAHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYG 374
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
+TE++ I+ C S+G + ++KI E NE+L VRG VM+GY
Sbjct: 375 MTETTATISCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGY 423
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+K P T++ DE G+L TGD G I H G L + R K+ + S G+ +
Sbjct: 424 YKLPEETEKTFDEHGFLKTGDAGHIDEH----------GNLFITDRIKELMKTSGGKYIA 473
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--- 426
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 474 PQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQ 533
Query: 427 -----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 534 VVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|385682208|ref|ZP_10056136.1| long-chain acyl-CoA synthetase [Amycolatopsis sp. ATCC 39116]
Length = 598
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 176/368 (47%), Gaps = 54/368 (14%)
Query: 59 QIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRY 115
+IR+ + P E G+ L LP HV RA + + L +T V+NL DL +
Sbjct: 208 EIRADINAFPQLMEQGNSLLCFLPLAHVLARAIAVTAVTARVTLGHTPDVKNLVADLGTF 267
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
+P ++++VP V+E +Y+G KQ S ++ RA E ++ ++
Sbjct: 268 RPTFVVAVPRVFEKVYNG-AKQKAHSEGKGKIFDRA---------------EQVAVSYSE 311
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHID 234
Q + L L HLL +KLVY K+++A+G A VSGG L +
Sbjct: 312 AQDTGGAGLG-----------LKAQHLLFDKLVYGKLRAALGGRCIAAVSGGAPLGARLA 360
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ IGV V GYGLTE+S +G+VG P+ T ++I AE EVL
Sbjct: 361 HFFRGIGVPVFEGYGLTETSAAANVNTQDAFRVGTVGRPVAGTSVRI--AEDGEVL---- 414
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
++G V YF N +ATK+AL EDGW +TGD+G + G L + G
Sbjct: 415 -----LKGDVVFGAYFNNETATKEAL-EDGWFHTGDLGELDDD----------GFLKITG 458
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R K+ IV + G+NV P LE+ LI Q +V+G DQR A ++ EE A K
Sbjct: 459 RKKEIIVTAGGKNVAPSGLEDTMRAHPLISQAMVVG-DQRPFIAALITIDEEFFPAWKSQ 517
Query: 415 SIVHADAS 422
+ ADA+
Sbjct: 518 NGKPADAT 525
>gi|384172735|ref|YP_005554112.1| long-chain-fatty-acid-CoA ligase [Arcobacter sp. L]
gi|345472345|dbj|BAK73795.1| long-chain-fatty-acid-CoA ligase [Arcobacter sp. L]
Length = 580
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 192/424 (45%), Gaps = 67/424 (15%)
Query: 38 LFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
+FS + NT P M Q+R + ++ + LS+LP H++ER +
Sbjct: 172 IFSIIYTSGNTGTPKGVMLTHKNIVSQLRDINKLIDLPKEEVALSLLPLAHIFERTVMSY 231
Query: 93 IFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 151
SRGI + + + N+ + ++ +P M VP + E +++ I+ QI +++A
Sbjct: 232 YLSRGISIYFVDDILNVANLMKIVKPTIMTVVPRLLEKIFNKIKTQILEKPFFSKIIAS- 290
Query: 152 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 211
++F+Y L N + S+L + D KLVY K
Sbjct: 291 ---LAFSY----------ALKENLDKSSFLFKIYD-------------------KLVYSK 318
Query: 212 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 270
+ G + VSGG L I F+ IGV V GYGLTE SPVI+ P+ N +GS
Sbjct: 319 FREIFGSRVQKLVSGGAPLSKEIAQFFVNIGVPVYQGYGLTEFSPVISTNYPSANKVGSC 378
Query: 271 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 330
G I +IKI A+ E+L V G +M+GY T + +D+DGWL+TGD
Sbjct: 379 GKVIPSAKIKI--AQNKELL---------VSGPSLMKGYLNQEELTAKTIDKDGWLHTGD 427
Query: 331 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 390
I ++ G L + R K+ STGE V + +E+ + I VVI
Sbjct: 428 IAYLDEE----------GYLFITSRLKEIFKTSTGEYVNAVAIEQKLSKDRYIEFAVVIS 477
Query: 391 QDQRRPGAIIVPDKEEVLMAAK---RLSI-VHADASEL--SKEKTISLLYGELRKWTSKC 444
++++ A++ DKE+ +A K L+I + E+ + K IS + +L +W
Sbjct: 478 ENKKFTTALLFIDKEKYQLAKKINNNLTIEEYYKQPEILDNISKHISNINKDLNQWEKIV 537
Query: 445 SFQI 448
F+I
Sbjct: 538 DFRI 541
>gi|397771967|ref|YP_006539513.1| AMP-dependent synthetase and ligase [Natrinema sp. J7-2]
gi|397681060|gb|AFO55437.1| AMP-dependent synthetase and ligase [Natrinema sp. J7-2]
Length = 673
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 179/391 (45%), Gaps = 71/391 (18%)
Query: 65 DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMI 121
D VP N + LS LP HV+ER G+F+ F+ G + Y + L++D +P +
Sbjct: 250 DDVPVLNEESVALSYLPLAHVFERTAGHFVLFASGACIAYAESPDTLQEDFSLVEPTTVT 309
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
SVP VYE +Y GI+++ S+A +R+ A + AY + + P
Sbjct: 310 SVPRVYEKIYDGIREEASQSAAKQRIFEWA-TDVGVAY-------------QQAESPG-- 353
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
IL LA+ LV+ ++ A+G + + +SGGGSL + Y A+
Sbjct: 354 -------------PILSAKQALADTLVFSTVREALGGNIEILISGGGSLSPELCRLYHAM 400
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK- 299
G+ + GYGLTE++P++A P +G++G P+ + + + + ++ A G V
Sbjct: 401 GLPIFEGYGLTETAPIVATNPPEAATIGTIGPPLCNVSVTVDETVADQEAFADDPGEVGE 460
Query: 300 --VRGSQVMQGYFKNPSATKQAL-----------DEDG--------------WLNTGDIG 332
VRG V QGY+ P AT+ A E G W TGDI
Sbjct: 461 LLVRGPNVTQGYWNKPGATEGAFIDAAPGEAARSSESGDADASADSAAASGQWFRTGDII 520
Query: 333 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 392
I P G L R K IVLSTG+NV P +E+A S ++ Q +V+G
Sbjct: 521 HIRPD----------GYLEFRDRVKQIIVLSTGKNVAPGPIEDAFAASEIVEQAMVVGDG 570
Query: 393 QRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
++ GA++VP+ + V A I DA +
Sbjct: 571 EKFIGALLVPNTDHVREWAASAGIDLPDAPQ 601
>gi|332288204|ref|YP_004419056.1| long chain fatty acid CoA ligase [Gallibacterium anatis UMN179]
gi|330431100|gb|AEC16159.1| long chain fatty acid CoA ligase [Gallibacterium anatis UMN179]
Length = 600
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 182/391 (46%), Gaps = 55/391 (14%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYE 128
+ D LS LP H++ERA ++ S+G + + +++ L +P M +VP YE
Sbjct: 221 DGSDVSLSFLPLSHIFERAWVAYVLSQGAVNVYLDDPHKVREALSVVKPTLMCAVPRFYE 280
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+ + ++ + R+ + +RI L QKQ L WL
Sbjct: 281 KIYATVFDKVKQAPWLRQQIFYNALRIG-----------KLALRYQQKQQP----LPFWL 325
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
PLH LA+ LV+ K+Q +G + GG L I +F+ IGV +++G
Sbjct: 326 K---------PLHQLADSLVFSKLQQVLGGRIRMMPCGGAKLEPEIGIFFHCIGVNIKLG 376
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++ ++ S+G + T +KI D NE+L V+G VM+
Sbjct: 377 YGMTETTATVSCWPDFGFESNSIGQIMPGTTVKIGDE--NEIL---------VKGGGVMK 425
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GYFKNP T + EDG+L TGD G++ G L + R KD + STG+
Sbjct: 426 GYFKNPEETAKCFTEDGFLKTGDAGYVDAE----------GNLFMTDRIKDLMKTSTGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK- 426
+ P +E L+ LI QI VI ++ A++VP + + AK+L+I + + +L K
Sbjct: 476 IAPQAVEGKLLQDKLIEQIAVIADARKYVSALVVPCFDTLEEYAKKLNIQYQNRLDLIKN 535
Query: 427 -------EKTISLLYGELRKWTSKCSFQIGP 450
EK I+ L EL+ + F + P
Sbjct: 536 AAIVEMFEKRINELQKELQGFEKIKKFTLLP 566
>gi|27364106|ref|NP_759634.1| long-chain-fatty-acid--CoA ligase [Vibrio vulnificus CMCP6]
gi|27360224|gb|AAO09161.1| Long-chain-fatty-acid--CoA ligase [Vibrio vulnificus CMCP6]
Length = 601
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 182/389 (46%), Gaps = 55/389 (14%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETL 130
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE +
Sbjct: 219 NDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSDIKPTVMCAVPRFYEKI 278
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
+S I +++ + R+++ + + + + EG +QPS +
Sbjct: 279 FSAIHEKVSRAPLMRKIMFTWAVNMGAKMSVCHQ--EG-------RQPSLM--------- 320
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYG 249
L H LA+KLV K+++ +G + + GG L I F+ AIG+ V++GYG
Sbjct: 321 ------LKKAHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYG 374
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
+TE++ I+ C S+G + ++KI E NE+L VRG VM+GY
Sbjct: 375 MTETTATISCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGY 423
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+K P T++ DE G+L TGD G I H G L + R K+ + S G+ +
Sbjct: 424 YKLPEETEKTFDEHGFLKTGDAGHIDEH----------GNLFITDRIKELMKTSGGKYIA 473
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--- 426
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 474 PQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQ 533
Query: 427 -----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 534 VVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|37678678|ref|NP_933287.1| long-chain acyl-CoA synthetase [Vibrio vulnificus YJ016]
gi|37197418|dbj|BAC93258.1| long-chain acyl-CoA synthetase [Vibrio vulnificus YJ016]
Length = 616
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 182/389 (46%), Gaps = 55/389 (14%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETL 130
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE +
Sbjct: 234 NDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSDIKPTVMCAVPRFYEKI 293
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
+S I +++ + R+++ + + + + EG +QPS +
Sbjct: 294 FSAIHEKVSRAPLMRKIMFTWAVNMGAKMSVCHQ--EG-------RQPSLM--------- 335
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYG 249
L H LA+KLV K+++ +G + + GG L I F+ AIG+ V++GYG
Sbjct: 336 ------LKKAHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYG 389
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
+TE++ I+ C S+G + ++KI E NE+L VRG VM+GY
Sbjct: 390 MTETTATISCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGY 438
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+K P T++ DE G+L TGD G I H G L + R K+ + S G+ +
Sbjct: 439 YKLPEETEKTFDEHGFLKTGDAGHIDEH----------GNLFITDRIKELMKTSGGKYIA 488
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--- 426
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 489 PQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQ 548
Query: 427 -----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 549 VVEMLEKRVNDLQKELAKFEQVKKFKLLP 577
>gi|269964650|ref|ZP_06178888.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
40B]
gi|269830549|gb|EEZ84770.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
40B]
Length = 602
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 182/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L + +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSQVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + A + ++QPS L
Sbjct: 280 SAIHEKVSRAPIHRKIMFTWAVNMGAKMAA---------CHQEKRQPSLL---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|448630135|ref|ZP_21672867.1| long-chain fatty-acid-CoA ligase [Haloarcula vallismortis ATCC
29715]
gi|445756479|gb|EMA07847.1| long-chain fatty-acid-CoA ligase [Haloarcula vallismortis ATCC
29715]
Length = 660
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 168/345 (48%), Gaps = 52/345 (15%)
Query: 74 KFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ ++ LP HV+ER G +F+++ G + Y + L DDLQ QP +SVP VYE ++
Sbjct: 264 RSIAFLPLAHVFERLAGHFFMYASGAAVSYAESPDTLADDLQTVQPMTGLSVPRVYERIF 323
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
++ Q S +R+ ++ + + T +
Sbjct: 324 DNMRTQASESPLKKRIFDWSM-----------DVARDYARTDDP---------------- 356
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
IL H LA++ VY ++ +G + + VSGGGSL + + +G+ + GYGL
Sbjct: 357 --GPILTAKHSLADRFVYSTVKERLGGNIEFMVSGGGSLSKTLCETFLGMGLTILEGYGL 414
Query: 251 TESSPVIAARRPTCNVLGSVGHPIN----HTEIKIVDA-ETNEVLPAGSKGIVKVRGSQV 305
TE+SPV+ P G++G P+ H + +VDA E ++V G G + V G V
Sbjct: 415 TETSPVLTVNPPEDVRPGTLGAPLTAVDVHIDTGVVDASEFDDV--TGDVGELLVDGPNV 472
Query: 306 MQGYFKNPSATKQALDE-DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
QGY+ P AT +A E DG W TGDI R L+ R K+ +VL
Sbjct: 473 TQGYWNAPDATTRAFTEIDGTQWFRTGDI----------VERTDDNFLIYHDRLKELLVL 522
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
STG+NV P +E+ S + Q++V+G DQ+ GAIIVP+ EE+
Sbjct: 523 STGKNVAPQPIEDQFATSDRVDQVMVVGDDQKFVGAIIVPNFEEL 567
>gi|330469354|ref|YP_004407097.1| AMP-dependent synthetase and ligase [Verrucosispora maris
AB-18-032]
gi|328812325|gb|AEB46497.1| AMP-dependent synthetase and ligase [Verrucosispora maris
AB-18-032]
Length = 618
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 157/332 (47%), Gaps = 49/332 (14%)
Query: 76 LSMLPPWHVYERACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 134
L LP H + R + +R + V+NL +LQ +P +++SVP V+E +Y+G
Sbjct: 245 LLFLPLAHAFARLIQIGVVQARATMAHCSDVKNLVPELQEIKPTFVLSVPRVFEKVYNG- 303
Query: 135 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 194
KQ ++ ++ ARA ++ AY+ G L
Sbjct: 304 AKQKAEAAGKGKIFARAEA-VAIAYSEALETSAGPGLA---------------------- 340
Query: 195 AILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 253
L H L +KLVY K+++A+G + +SGG L + F+ +GV V GYGLTE+
Sbjct: 341 --LRVQHALFDKLVYGKLRAALGGRCRDAISGGAPLGARLGHFFRGVGVPVCEGYGLTET 398
Query: 254 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 313
SP +A P +G+VG P+ I+I D G V + G V QGY++N
Sbjct: 399 SPAASANLPGFTRIGTVGRPLPGVTIRIAD-----------DGEVLIAGDIVFQGYWRND 447
Query: 314 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 373
AT +A+ DGW TGD+G S G L + GR K+ IV ++G+NV P L
Sbjct: 448 EATAEAISSDGWFRTGDLG----------SLDGDGYLTITGRKKEIIVTASGKNVAPAVL 497
Query: 374 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
E+ LI Q VV+G Q A+I D+E
Sbjct: 498 EDQVRAHQLISQCVVVGDRQPFIAALITLDEE 529
>gi|397645912|gb|EJK77039.1| hypothetical protein THAOC_01158 [Thalassiosira oceanica]
Length = 695
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 192/409 (46%), Gaps = 69/409 (16%)
Query: 73 DKFLSMLPPWHVYERAC---------GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 123
D+ L+ LP H Y + C G RG+ L+ +DL +P + +V
Sbjct: 292 DRSLAFLPWAHSYGQTCELWCAISHGGSMGVCRGVPLIL-------EDLALVKPTVLFAV 344
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P +Y+ +Y G+Q I +SS ++ + RA + L R +K+ +
Sbjct: 345 PTLYKKVYDGVQNLIGSSSPTKQKLMRAALD----------------LGRKKKESGGSLG 388
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
L++ L R++ + LV KI+ G + + G G + P I F + IG+
Sbjct: 389 LVEGLKHRVL-----------DGLVTSKIRDRFGGNLRHGFVAGAACPKEILDFMDDIGI 437
Query: 243 KVQVGYGLTESSPVIAARRP--TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
+ GYGLTE+SP+IA P LG VG P++ E+ I+D +TN+ +P+G +G +
Sbjct: 438 TICEGYGLTETSPIIAINAPYEGKRKLGHVGKPVDGVEVVIIDPDTNQEVPSGQEGEICC 497
Query: 301 RGSQVMQGYFKNPSATKQALD--EDG---WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G VM+GY++NP AT + + DG +TGD+G ++ G + + GR
Sbjct: 498 YGRNVMRGYYRNPEATAEVISVAPDGKSRLFHTGDMGNLSED----------GFVAVTGR 547
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K+ L G+ V P +EE+ S I Q VV G ++ A+IVPD +A +
Sbjct: 548 LKEQYKLENGKYVVPTPIEESITMSRFIAQTVVCGANREHNVALIVPD----WVAIRSTL 603
Query: 416 IVHADASE---LSKEKTISLLYGELRKWTSKC-SFQIGPIHVVDEPFTV 460
+ DASE ++ + L+ E+R T K +++ + PFTV
Sbjct: 604 NIADDASEDDLVNNPEVRGLMDEEIRVNTYKLKKYEVPQMWAFVAPFTV 652
>gi|332665277|ref|YP_004448065.1| long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
gi|332334091|gb|AEE51192.1| Long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
Length = 593
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 169/364 (46%), Gaps = 54/364 (14%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQP 117
I+S ++P K LS LP H++ER Y + G + Y L +L+ +P
Sbjct: 200 NIKSTIALLPVNCDKKTLSFLPLSHIFERMVIYTYVAVGASVTYAEGQEQLLSNLREVRP 259
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
HY+ +VPL+ E L I S R+ + + I + Y KR Q
Sbjct: 260 HYITAVPLIIERLVEQIMANSKKGSFLRKRIIKWAIELGKNYYDSKR------------Q 307
Query: 178 P-SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDL 235
P +Y W R+ LA LV+ + + G G V G +L +
Sbjct: 308 PLAY--------WLRLS---------LARILVFNRWRKMFGGRVEGIVVGAAALNPVLGR 350
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARR--PTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
+ A G+KV+ GYGLTE+SPVIA R P + G+VG PI E++IV+ +
Sbjct: 351 LFSAAGLKVREGYGLTETSPVIAFNRFEPGGSRFGTVGMPIPGVEVRIVNPDEE------ 404
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVL 352
G V+V+G VM GY++ P A+++ + EDGW TGD+G W+ H R L L
Sbjct: 405 GAGEVQVKGPNVMLGYYQQPEASREVMTEDGWFRTGDVGMWV---HKR--------FLKL 453
Query: 353 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMA 410
+GR D G+ + P +E+ L S I Q +V G + P A+IVP DK E
Sbjct: 454 KGRQDDMFKTGAGKFIAPEAVEKQLLHSEYISQCLVAGASRPAPYALIVPRFDKLEEWCK 513
Query: 411 AKRL 414
A+++
Sbjct: 514 AQKV 517
>gi|91227124|ref|ZP_01261608.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
gi|91188776|gb|EAS75063.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
Length = 602
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 182/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L + +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSQVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + A + ++QPS L
Sbjct: 280 SAIHEKVSRAPIHRKIMFTWAVNMGAKMAA---------CHQEKRQPSLL---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|433603463|ref|YP_007035832.1| Long-chain-fatty-acid-CoA ligase FadD15 [Saccharothrix espanaensis
DSM 44229]
gi|407881316|emb|CCH28959.1| Long-chain-fatty-acid-CoA ligase FadD15 [Saccharothrix espanaensis
DSM 44229]
Length = 602
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 57/341 (16%)
Query: 70 ENGDKFLSMLPPWHVYERA---CGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPL 125
+ G+ L LP H+ RA CG +++R + L +T VRNL +DLQ ++P ++++VP
Sbjct: 225 QAGNSLLVFLPLAHILARAIALCG--VYTR-VTLGHTPDVRNLVEDLQSFRPTFVVAVPR 281
Query: 126 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 185
V+E +Y+G +++ +A + + A + AY+ + +
Sbjct: 282 VFEKVYNGAKQK--AHAAGKGKIFDAAEATAVAYSQALDGGGAGLGLKVK---------- 329
Query: 186 DWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKV 244
H + KLVY K+Q+A+G A VSGG L + F+ +GV V
Sbjct: 330 ---------------HAVFSKLVYSKLQAALGGRCIAAVSGGAPLGARLAHFFRGVGVPV 374
Query: 245 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 304
GYGLTE+S T +G+VG PI T ++I AE E+L ++G
Sbjct: 375 LEGYGLTETSAAACVNTETAFRVGTVGRPIAGTAVRI--AEDGEIL---------IKGDV 423
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
V + Y+ NP+AT +AL EDGW ++GD+G + G L + GR K+ IV +
Sbjct: 424 VFRSYWNNPTATAEAL-EDGWFHSGDLGELDDD----------GFLRITGRKKEIIVTAG 472
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
G+NV P LE+ LI Q +V+G Q GA+I D E
Sbjct: 473 GKNVSPAVLEDRLRSHPLISQCMVVGDAQPFIGALITIDPE 513
>gi|269956645|ref|YP_003326434.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
gi|269305326|gb|ACZ30876.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
Length = 622
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 172/369 (46%), Gaps = 64/369 (17%)
Query: 40 SFVLIDLNTWMPIPKMTNFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIE 99
+F + LNT +P++ N R++ LP HV+ R + G
Sbjct: 222 NFTTLALNTVAEVPEVFNGMGRTII-------------FLPLAHVFARFVEVVAVAGGSV 268
Query: 100 LMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 158
L ++ ++NL DL ++P Y++ VP ++E +Y+ ++ SSAA + AR + A
Sbjct: 269 LGHSPDIKNLTKDLAAFRPTYLLGVPRIFEKVYNTAEQ----SSAAEK--ARGYFNWATA 322
Query: 159 YT-AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 217
A+ R + ++ PS LW + L A+ LVY K++ +G
Sbjct: 323 VAIAYSRALD------TERGPS--------LWLKF-------QRLFADGLVYSKLRDKLG 361
Query: 218 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 276
K VSGGG L + FY IG+ + GYGLTE++ + RP +GSVG +
Sbjct: 362 GRVKFAVSGGGPLGERLGHFYRGIGLHIIEGYGLTETTAPTSVNRPGATRVGSVGQMLPG 421
Query: 277 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 336
+ I D G + ++G + +GY +NP AT A DEDGW TGD+G +
Sbjct: 422 CSVSIAD-----------DGEILLKGPHLFRGYHRNPEATAAAFDEDGWFRTGDLGKVDD 470
Query: 337 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 396
G + + GR K+ IV + G+NV P LE+ +L+ Q VV+G ++
Sbjct: 471 E----------GFVHITGRKKEIIVTAGGKNVAPAVLEDRVRAHALVSQCVVVGDNRPFI 520
Query: 397 GAIIVPDKE 405
GA++ D E
Sbjct: 521 GALVTLDAE 529
>gi|153839176|ref|ZP_01991843.1| AMP-binding family protein [Vibrio parahaemolyticus AQ3810]
gi|149747314|gb|EDM58294.1| AMP-binding family protein [Vibrio parahaemolyticus AQ3810]
Length = 602
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ F + C + +++PS +
Sbjct: 280 SAIHEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKRKPSMM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ I+ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATISCWDDKCFDPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNELQKELAKFEQVKKFKLLP 562
>gi|433656674|ref|YP_007274053.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
gi|432507362|gb|AGB08879.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
Length = 602
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ F + C + +++PS +
Sbjct: 280 SAIHEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKRKPSMM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ I+ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATISCWDDKCFDPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNELQKELAKFEQVKKFKLLP 562
>gi|322513780|ref|ZP_08066867.1| long-chain-fatty-acid--CoA ligase [Actinobacillus ureae ATCC 25976]
gi|322120411|gb|EFX92337.1| long-chain-fatty-acid--CoA ligase [Actinobacillus ureae ATCC 25976]
Length = 592
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 198/442 (44%), Gaps = 71/442 (16%)
Query: 26 FITLFFSRRDLPLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENG--DKFLSM 78
I S R LF+ + T P M +F Q+++ +D+ E G D LS
Sbjct: 171 LIRCLSSARFDDLFTLIYTSGTTGTPKGVMLDFSNLAHQLQA-HDLALPEVGPDDVSLSF 229
Query: 79 LPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQ 137
LP H++ERA ++ +G + Y N ++ L +P M +VP +YE +YSGI +
Sbjct: 230 LPFSHIFERAWVAYLLHKGATVCYLEDTNEVRTALAEVKPTLMCAVPRLYEKMYSGIFDK 289
Query: 138 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 197
+ + RR + + ++ +G QK
Sbjct: 290 VKQAPFYRRALFQWALK------------QGKHFVHTQKATF------------------ 319
Query: 198 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 256
+ LA+KLV K+++ +G + K GG L I F+ +IG+ V++GYG+TE++
Sbjct: 320 --TYKLADKLVLSKLRALLGGNIKMMPCGGAKLEPTIGEFFHSIGINVKLGYGMTETTAT 377
Query: 257 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 316
++ L S+G + + E+KI D NE+L VRG VM+GY+KNP T
Sbjct: 378 VSCWADRNFALNSIGTLMPNAEVKIGD--DNEIL---------VRGGMVMKGYYKNPQET 426
Query: 317 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 376
+A EDG+L TGD G + H G L + R K+ + S G+ + P +E
Sbjct: 427 AKAFTEDGFLRTGDAGALDEH----------GNLYITDRIKELMKTSNGKYIAPQYIEGK 476
Query: 377 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EK 428
+ I QI VI ++ A+IVP E + AK+L+I + D EL K EK
Sbjct: 477 LAKDKFIEQIAVIADTKKYVSALIVPSFEALEEYAKQLNIKYHDRLELIKHSAVIQLFEK 536
Query: 429 TISLLYGELRKWTSKCSFQIGP 450
I L EL + F + P
Sbjct: 537 RIEELQQELPHFEQIKKFTLLP 558
>gi|383774733|ref|YP_005453802.1| long-chain-fatty-acid-CoA ligase [Bradyrhizobium sp. S23321]
gi|381362860|dbj|BAL79690.1| probable long-chain-fatty-acid-CoA ligase [Bradyrhizobium sp.
S23321]
Length = 590
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 178/360 (49%), Gaps = 49/360 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
++++ + A D FLS LP H +ER GY+ + G + Y +V L +DL++ +
Sbjct: 198 NVKAIAHRIAASPEDVFLSFLPLSHTFERTGGYYYPIAAGACVAYARSVPLLSEDLKQVR 257
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P +ISVP +YE +Y+ I + T+ A V RAL+ ++ A + R+ +
Sbjct: 258 PTVLISVPRIYERIYALIMQHRATAGA----VERALLDLTLAIGGRRFDARQGHGARSLR 313
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ + WPL ++LV K+ + +G K VSGG + +
Sbjct: 314 E-----------------RLAWPL---LKRLVADKVLAQLGGRLKVAVSGGAPIAEPVIR 353
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
+ ++G+ V GYG+TE+SPV++ N SVGH ++ E+++ D +
Sbjct: 354 LFLSLGLDVLQGYGMTETSPVVSVNTIEDNDPHSVGHVLDGIEVRLGDNDE--------- 404
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
++VRG VM GY+ P T++ D DGWL+TGD ++R G + + GR
Sbjct: 405 --LQVRGPSVMLGYWHKPDETRRVKDADGWLHTGD-----------QARIDNGRITITGR 451
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
KD +V STGE + P++LE A L L Q +V+G+ + A++V + + +RL+
Sbjct: 452 IKDILVTSTGEKIAPVDLETAILADPLFEQALVVGEQRPFLTALVVLNARAWVQEKERLA 511
>gi|379710628|ref|YP_005265833.1| long-chain-fatty-acid--CoA ligase [Nocardia cyriacigeorgica GUH-2]
gi|374848127|emb|CCF65199.1| Long-chain-fatty-acid--CoA ligase [Nocardia cyriacigeorgica GUH-2]
Length = 598
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 160/337 (47%), Gaps = 51/337 (15%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYET 129
G K L LP HV+ RA F + + +T+ L D ++PH+++SVP V+E
Sbjct: 223 EGKKTLLFLPLAHVFARAVALAAFDAKVIVAHTSDWTTLVDQFAEFKPHFILSVPRVFEK 282
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+++ +++ + A I+++ EG K + LV I
Sbjct: 283 VFNSAKQKAHDGGKGKIFDLAAETAIAYS--------EGL-----DKGGADLVTKIK--- 326
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
H + +KLVY K++ A+G +A VSGGG L + F+ +GV + GY
Sbjct: 327 -----------HFVFDKLVYSKLRVALGGQCEAAVSGGGPLGARLGHFFRGVGVTIFEGY 375
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTE++ I P +GSVG PI KI AE E+L ++GS V G
Sbjct: 376 GLTETTAAITVNTPEHIRVGSVGRPIEGHAAKI--AEDGELL---------LKGSVVFDG 424
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+ N AT++A EDGW TGD+G I G + + GR K+ IV + G+NV
Sbjct: 425 YWGNAEATEEAF-EDGWFKTGDLGAI----------DADGFVTITGRKKEIIVTAGGKNV 473
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE++ LI Q++V+G Q GA+I D E
Sbjct: 474 SPALLEDSLRAHPLISQVMVVGDGQPFVGALITLDPE 510
>gi|448388126|ref|ZP_21565066.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
gi|445670777|gb|ELZ23374.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
Length = 652
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 172/359 (47%), Gaps = 51/359 (14%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSG 133
+S LP HV+ER G+F+ F+ G + Y + L++D P SVP VYE +Y G
Sbjct: 262 MSYLPLAHVFERTAGHFVLFASGSCIAYAENPDTLQEDFSIVGPTTATSVPRVYEKIYDG 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q + S A++ + + AY + P L
Sbjct: 322 IREQA-SESGAKQTIFEWATDVGVAY-------------QQADSPGPL------------ 355
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
L +A+KLV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 356 ---LRAKQAIADKLVFSTVREALGGNIDLLISGGGSLSPELCRLYHAMGLPIFEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKI----VDAETNEVLPAGSKGIVKVRGSQVMQG 308
+SPV+A P +G++G +++ +++I D E + P G G + V G V +G
Sbjct: 413 TSPVVATNPPDAAKIGTIGPAVSNVDLRIDETVADQEAFDDDP-GKVGELLVAGPSVTEG 471
Query: 309 YFKNPSATKQALDE--DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
Y+ P AT+ A E DG W TGDI RR G L R K IVLST
Sbjct: 472 YWNRPGATQGAFTEGDDGTQWFRTGDI----------VHRRPDGYLEFRDRLKQIIVLST 521
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
G+NV P +E+A S ++ Q +V+G ++ GA++VP+ + A I +D E
Sbjct: 522 GKNVAPGPIEDAFAASEIVEQAMVVGDGEKFIGALLVPNTTHIREWADEEGIDLSDDLE 580
>gi|313147826|ref|ZP_07810019.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|424665955|ref|ZP_18102991.1| hypothetical protein HMPREF1205_01830 [Bacteroides fragilis HMW
616]
gi|313136593|gb|EFR53953.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404574208|gb|EKA78959.1| hypothetical protein HMPREF1205_01830 [Bacteroides fragilis HMW
616]
Length = 601
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 190/407 (46%), Gaps = 53/407 (13%)
Query: 63 LYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHY 119
++DI + DK +SM LP HV+E+A Y +G+++ + +++ ++ +P
Sbjct: 211 IHDIRLVDMTDKDVSMNFLPLTHVFEKAWTYLCVHKGVQVCINLRPADIQTTIKEIRPTL 270
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
M SVP +E +Y+G+Q++I ++ ++++ I++ RI+ R K P
Sbjct: 271 MCSVPRFWEKVYAGVQEKIAETTGIKKMLMLDAIKVG-------RIH-NLEYLRVGKTPP 322
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFY 237
++ L + EK +Y ++ IGI + G ++P I F
Sbjct: 323 KMIQL---------------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICEFV 367
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
++G+ + VGYGLTES+ ++ T +GSVG + E+KI E NE+L
Sbjct: 368 HSVGIDMLVGYGLTESTATVSCTSKTGYDIGSVGQVMPEVEVKI--GEDNEIL------- 418
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
+RG + +GY+K AT A+DE+GW +TGD G+ G L L R K
Sbjct: 419 --LRGKTITKGYYKKAEATAAAIDEEGWFHTGDAGYFK-----------NGQLYLTERIK 465
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
D S G+ + P LE + I QI +I ++ A+IVP V AK I
Sbjct: 466 DLFKTSNGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKQYAKEKGIE 525
Query: 418 HADASELSKE-KTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTVN 461
+ D +EL + K I+L + + + QI ++ EPF++
Sbjct: 526 YKDMTELLEHPKIIALFRARIDTLQQQFAHYEQIKRFTLLPEPFSME 572
>gi|387792640|ref|YP_006257705.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
gi|379655473|gb|AFD08529.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
Length = 631
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 192/386 (49%), Gaps = 52/386 (13%)
Query: 74 KFLSMLPPWHVYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISV 123
K L +LP H + G++ F G M T ++N+ ++Q +P+ ++SV
Sbjct: 218 KTLIILPLDHCFAHVAGFYSFMASGASVATVDPGKNAMDT-LKNIPVNMQEIKPNLLLSV 276
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P + + I+ I + ++I++AY EGF N+ Q + +V
Sbjct: 277 PALAKNFKKNIESAIKQKGGITEKLFNHALKIAYAYNR-----EGF----NKGQGASIV- 326
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIG 241
PL +K+++ K+++A G + GGG+L + IDL F+ AIG
Sbjct: 327 -------------YKPLLAFYDKILFSKVRNAFGGELSFFIGGGAL-LDIDLQRFFYAIG 372
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 301
V + GYGL+E++P+I++ + LGS G+ + E+KI D + N LP G KG + ++
Sbjct: 373 VPMFQGYGLSEATPIISSNSLKKHKLGSSGYLVKPMELKICDEQGNS-LPVGQKGEIVIK 431
Query: 302 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 361
G VM GY+KN +AT + ++GWL+TGD+G++ G L + GR K ++
Sbjct: 432 GENVMMGYWKNETATADTI-KNGWLHTGDLGYM----------DSDGFLYVLGRFKSLLI 480
Query: 362 LSTGENVEPLELEEAALRSS-LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 420
S GE P +EE+ + +S I Q+++ A++VP+KE + ++ +
Sbjct: 481 GSDGEKYSPEGIEESLVENSKFIDQVMLHNNQDAYTTALLVPNKESLKSYLRQKGLNW-- 538
Query: 421 ASELSKEKTISLLYGELRKWTSKCSF 446
SE K++ I +L E+ ++ S+ F
Sbjct: 539 ESEEGKKEAIKMLQAEVNEYKSQGKF 564
>gi|407693103|ref|YP_006817892.1| FAA1 protein [Actinobacillus suis H91-0380]
gi|407389160|gb|AFU19653.1| FAA1 protein [Actinobacillus suis H91-0380]
Length = 592
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 195/430 (45%), Gaps = 71/430 (16%)
Query: 38 LFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENG--DKFLSMLPPWHVYERACG 90
LF+ + T P M +F Q+++ +D+ E G D LS LP H++ERA
Sbjct: 183 LFTIIYTSGTTGTPKGVMLDFSNLAHQLQA-HDLALPEVGPDDVSLSFLPFSHIFERAWV 241
Query: 91 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 149
++ +G + Y N ++ L +P M +VP ++E +YS I ++ + RR +
Sbjct: 242 AYLLHKGATVCYLEDTNEVRTALAEVKPTLMCAVPRLFEKMYSAIFDKVKQAPFHRRALF 301
Query: 150 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 209
R ++ +G QK A L + LA KLV
Sbjct: 302 RWALK------------QGKTFVHTQK------------------ATL--AYKLANKLVL 329
Query: 210 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 268
K+++ +G + K GG L I F+ +IGV V++GYG+TE++ ++ L
Sbjct: 330 TKLRALLGGNIKMMPCGGAKLEPAIGEFFHSIGVNVKLGYGMTETTATVSCWTDRNFALN 389
Query: 269 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 328
S+G + + E+KI E NE+L VRG VM+GY+KNP T +A EDG+L T
Sbjct: 390 SIGTLMPNAEVKI--GEDNEIL---------VRGGMVMKGYYKNPEETAKAFTEDGFLRT 438
Query: 329 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 388
GD G + H G L + R K+ + S G+ + P +E + I QI V
Sbjct: 439 GDAGALDEH----------GNLYITDRIKELMKTSNGKYIAPQYIEGKLAKDKFIEQIAV 488
Query: 389 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 440
I ++ A+IVP E + AK+L+I + D EL K EK I L EL +
Sbjct: 489 IADTKKYVSALIVPSFEALEEYAKQLNIRYHDRLELIKHSAVIQLFEKRIEELQQELAHF 548
Query: 441 TSKCSFQIGP 450
F + P
Sbjct: 549 EQIKKFTLLP 558
>gi|262275041|ref|ZP_06052852.1| long-chain-fatty-acid--CoA ligase [Grimontia hollisae CIP 101886]
gi|262221604|gb|EEY72918.1| long-chain-fatty-acid--CoA ligase [Grimontia hollisae CIP 101886]
Length = 597
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 184/402 (45%), Gaps = 55/402 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQP 117
QI S ++ + L+ LP HV+ER +++ G Y + +++ LQ +P
Sbjct: 205 QIESHDQVLGISENEVSLAFLPLSHVFERCWTFYVLHHGATNCYLSNTYAIREALQDVKP 264
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
M +VP YE +YS + +++ T++ ++ + RA + I +TR K+
Sbjct: 265 TVMCAVPRFYEKIYSAVHEKVATANPVKKGMFRAAVSIGNLMAE---------ITRKGKK 315
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLF 236
P+ WL + H +A+KLV K++ +G + + GG L I F
Sbjct: 316 PA------PWLKS---------AHRMADKLVLSKLRELLGGNITMMPCGGAKLEPAIGRF 360
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+ AIGV V++GYG+TE++ ++ S+G P+ + E+KI E NE+L
Sbjct: 361 FHAIGVNVKLGYGMTETTATVSCWDSGSFDPDSIGMPMPNAEVKI--GENNEIL------ 412
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
VRG VM+GY+ P T +DG+L TGD G I G L + R
Sbjct: 413 ---VRGPMVMRGYYNKPKETADTFTKDGFLKTGDAGHI----------DAKGNLFITDRI 459
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
K+ + S G+ + P +E + I QI V+ + A+IVP E + AK L+I
Sbjct: 460 KELMKTSGGKYIAPQMIEGKLGKDHFIEQIAVVADARHFVSALIVPCFETLESWAKELNI 519
Query: 417 VHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 450
+ D EL K EK ++ L EL K+ F + P
Sbjct: 520 KYHDRMELIKHSEVVELFEKRLAELQKELAKFEQVKKFTLLP 561
>gi|444379072|ref|ZP_21178257.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
gi|443676909|gb|ELT83605.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
Length = 598
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 183/402 (45%), Gaps = 55/402 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQP 117
QI S ++ + L+ LP HV+ER +++ G Y + N +++ LQ +P
Sbjct: 205 QIESHDKVLGISENEVSLAFLPLSHVFERCWSFYVLHHGATNCYLSNTNAIREALQEVKP 264
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
M +VP YE +YS + +++ T+S ++ + RA + I +TR K+
Sbjct: 265 TVMCAVPRFYEKIYSAVHEKVATASPVKKGMFRAAVYIGNLMAE---------ITRKGKK 315
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLF 236
P+ WL + H +A+KLV K++ +G + + GG L I F
Sbjct: 316 PA------PWLKS---------AHRMADKLVLSKLRQLLGGNITMMPCGGAKLEPTIGRF 360
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+ AIGV V++GYG+TE++ I+ S+G P+ + E+KI + NE+L
Sbjct: 361 FHAIGVNVKLGYGMTETTATISCWDSGSFDPDSIGMPMPNAEVKI--GQNNEIL------ 412
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
VRG VM+GY+ T + DG+L TGD G I G L + R
Sbjct: 413 ---VRGPMVMRGYYNKAKETAETFTTDGFLKTGDAGHIDAQ----------GNLFITDRI 459
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
K+ + S G+ + P +E + I QI V+ + A+IVP E + AK L+I
Sbjct: 460 KELMKTSGGKYIAPQVIEGKLGKDHFIEQIAVVADARHFVSALIVPCFESLETWAKELNI 519
Query: 417 VHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 450
+ D EL K EK + L EL K+ F + P
Sbjct: 520 KYHDRMELIKHSEVVEMFEKRVEELQKELAKFEQVKKFTLLP 561
>gi|28897125|ref|NP_796730.1| long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus RIMD
2210633]
gi|260361698|ref|ZP_05774725.1| putative AMP-binding enzyme [Vibrio parahaemolyticus K5030]
gi|260878037|ref|ZP_05890392.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus AN-5034]
gi|260896932|ref|ZP_05905428.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus Peru-466]
gi|260903404|ref|ZP_05911799.1| putative AMP-binding enzyme [Vibrio parahaemolyticus AQ4037]
gi|28805334|dbj|BAC58614.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
RIMD 2210633]
gi|308088769|gb|EFO38464.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus Peru-466]
gi|308089896|gb|EFO39591.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus AN-5034]
gi|308109048|gb|EFO46588.1| putative AMP-binding enzyme [Vibrio parahaemolyticus AQ4037]
gi|308115498|gb|EFO53038.1| putative AMP-binding enzyme [Vibrio parahaemolyticus K5030]
Length = 602
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ F + C + +++PS +
Sbjct: 280 SAIHEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKRKPSMM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ I+ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATISCWDDKCFDPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNELQKELAKFEQVKKFKLLP 562
>gi|167856072|ref|ZP_02478815.1| DNA polymerase III subunit chi [Haemophilus parasuis 29755]
gi|219871804|ref|YP_002476179.1| long chain fatty acid CoA ligase [Haemophilus parasuis SH0165]
gi|167852821|gb|EDS24092.1| DNA polymerase III subunit chi [Haemophilus parasuis 29755]
gi|219692008|gb|ACL33231.1| long chain fatty acid CoA ligase [Haemophilus parasuis SH0165]
Length = 595
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 176/364 (48%), Gaps = 51/364 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 131
D LS LP H++ERA ++F RG Y N ++D L +P M +VP YE +Y
Sbjct: 218 DVSLSFLPLSHIFERAWVAYVFHRGATNCYLEDTNHVRDALTTLKPTVMCAVPRFYEKIY 277
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ + ++ + A RR + IR+ ++ Y+ +QPS W R
Sbjct: 278 TAVWDKVEKAPAHRRALFNWAIRVG------EKHYQT-------EQPSQ--------WLR 316
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
+ A LA+KLV K+++ +G K GG L I F+ +IG+ +++GYG+
Sbjct: 317 LQYA-------LADKLVLTKLRALLGGRIKMMPCGGAKLEASIGSFFHSIGINIKLGYGM 369
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ + S+G + + E+KI E NE+L VRG VM+GY+
Sbjct: 370 TETTATVSCWQDKGFNPNSIGTLMPNAEVKI--GEENEIL---------VRGGMVMRGYY 418
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T +A EDG+L TGD+G + CG + + + R K+ + G+ + P
Sbjct: 419 KKPEETAKAFTEDGFLRTGDVGEMDS---------CGNLFITD-RLKELMKTLNGKYIAP 468
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + I QI VI ++ A+IVP + + AK+L+I + D EL K I
Sbjct: 469 QYIEGKIGKDKFIEQIAVIADAKKYVSALIVPCFDSLEEYAKQLNIKYQDRIELIKHSDI 528
Query: 431 SLLY 434
++
Sbjct: 529 IQMF 532
>gi|315504530|ref|YP_004083417.1| amp-dependent synthetase and ligase [Micromonospora sp. L5]
gi|315411149|gb|ADU09266.1| AMP-dependent synthetase and ligase [Micromonospora sp. L5]
Length = 600
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 160/337 (47%), Gaps = 49/337 (14%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYET 129
G L LP H + R + + + A +NL +LQ ++P +++SVP V+E
Sbjct: 222 QGASTLLFLPLAHAFARLIQVGVVHARATMAHCADTKNLVAELQDFKPTFVLSVPRVFEK 281
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G +Q S ++ RA +++ A++ + + G L
Sbjct: 282 VYNG-ARQKAESEGKGKIFDRAE-KVAIAWSEAQELPGGPGLG----------------- 322
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L H L +KLVY+K+++A+G + +SGG L + F+ +GV + GY
Sbjct: 323 -------LRAQHALFDKLVYRKLRAAMGGRCRDAISGGAPLGARLGHFFRGVGVTICEGY 375
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTE+SP AA PT +G+VG P+ I+I D G V + G V QG
Sbjct: 376 GLTETSPAAAANLPTGTRIGTVGRPLPGVTIRIDD-----------DGEVLIAGDIVFQG 424
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+ N +AT +A+ DGW TGD+G + G L + GR K+ IV + G+NV
Sbjct: 425 YWHNDAATAEAISTDGWFRTGDLGHLDDD----------GYLSITGRKKEIIVTAGGKNV 474
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+ LI Q VV+G Q A++ D+E
Sbjct: 475 APAVLEDQVRAHPLISQCVVVGDRQPFIAALVTIDEE 511
>gi|354596150|ref|ZP_09014167.1| Long-chain-fatty-acid--CoA ligase [Brenneria sp. EniD312]
gi|353674085|gb|EHD20118.1| Long-chain-fatty-acid--CoA ligase [Brenneria sp. EniD312]
Length = 607
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 204/441 (46%), Gaps = 60/441 (13%)
Query: 34 RDL-PLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDI-VPAENGDKFLSMLPPWHVYE 86
RDL LF+ + T P M ++ Q++ L+D+ + D L LP HV+E
Sbjct: 184 RDLNDLFTLIYTSGTTGEPKGVMLDYANMAMQLK-LHDLRLRVTETDISLCFLPLSHVFE 242
Query: 87 RACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 145
RA +FI G + +Y NL + +Q +P M +VP YE +YS I ++ + R
Sbjct: 243 RAWSFFIMHSGAQNVYLNDTNLVRAAMQAVKPTMMCAVPRFYEKVYSAIYEKAAQAPWYR 302
Query: 146 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 205
+ + +A +R+ F L R K P W R+ +H A+
Sbjct: 303 QRL------FHWAVAQGRRV---FLLRRAGKHPG--------AWRRL-------MHRYAD 338
Query: 206 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 264
+LV K++ +G + + G L +I LF++++G+++ GYG+TE+ ++
Sbjct: 339 RLVLGKLRQLLGGQIRFLPAAGARLDDNIILFFQSMGIRIVYGYGMTETCATVSCWEEEN 398
Query: 265 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 324
LGS+G P+ E++I G+ ++VRG+ VM+GYF P T A DG
Sbjct: 399 FRLGSIGTPLPEIEVRI-----------GADNEIQVRGATVMRGYFHRPQETADAFTADG 447
Query: 325 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 384
WL TGD G + G L + R KD + S G+ + P LE + I
Sbjct: 448 WLKTGDAGELDAQ----------GNLFITERLKDLMKTSGGKYIAPQHLEGTLGQDRFIE 497
Query: 385 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----ELRKW 440
Q+ VI ++ A+IVP E + A+ +++ + D EL + I L+ E++K
Sbjct: 498 QVAVIADARKYVSALIVPCFEALEEHARSINLKYHDRLELLRHSHIIELFEQRLREIQKE 557
Query: 441 TSKCSFQIGPIHVVDEPFTVN 461
S+ Q+ ++ PF+++
Sbjct: 558 LSRVE-QVKKFTLLPAPFSMD 577
>gi|345870330|ref|ZP_08822283.1| Long-chain-fatty-acid--CoA ligase [Thiorhodococcus drewsii AZ1]
gi|343921902|gb|EGV32611.1| Long-chain-fatty-acid--CoA ligase [Thiorhodococcus drewsii AZ1]
Length = 605
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 162/331 (48%), Gaps = 48/331 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H+ ER GY++ G + Y ++ L +D+Q +P +I+VP V+E +
Sbjct: 228 DVFLSFLPLSHMLERTGGYYLPLMAGATVAYARSIAQLAEDMQTIRPTVIIAVPRVFERI 287
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y I Q+ T AA R + +++ + +F+R R P+ L
Sbjct: 288 YQRIADQLETKPAAVRWLFNTAVKV--GWRSFQR-----TQGRAGWHPTLL--------- 331
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
LWP L K+ ++ G +A VSGG +LP + + +G+ + GYGL
Sbjct: 332 ------LWPF--LRHKVGAPVLERLGGRIRAAVSGGAALPNSVARTFIGLGLPLIQGYGL 383
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE+SPV++ N+ SVG PI +++I G+ ++++G VM GY+
Sbjct: 384 TETSPVVSVNPLQANIPDSVGPPIRGIKVRI-----------GADDELQIKGHCVMMGYW 432
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
N +AT + L +DGW +TGD ++R G + + GR KD +VLS GE V P
Sbjct: 433 NNHAATAKVLSQDGWFHTGD-----------QARIENGRVYITGRLKDILVLSNGEKVPP 481
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
+LE A L Q VV+G+ A++V
Sbjct: 482 GDLELAISLDPLFDQTVVLGEGHSYLTALLV 512
>gi|406910414|gb|EKD50442.1| hypothetical protein ACD_62C00542G0002 [uncultured bacterium]
Length = 595
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 166/357 (46%), Gaps = 48/357 (13%)
Query: 72 GDKF--LSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 128
G+ F L LP H+ R +F G Y ++ L D++ +PH+M+SVP ++E
Sbjct: 214 GEDFTGLLFLPLAHILGRVTQFFHIHVGHTQCYAESIDRLIDNIATVKPHFMVSVPRIFE 273
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+++ + + S ++ + R ++I + +R+ KQP
Sbjct: 274 KIHARTLQNVENSPPLKQHIFRWALKIGEQRS--QRLL--------TKQP---------- 313
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
+C L + LA LV+KK+ +G + +SGG L + LF+ A G + G
Sbjct: 314 --LPVCMKLK--YFLAHHLVFKKLHDKMGGRIRFFISGGAPLSADLALFFHAFGFTILEG 369
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTE++ ++ R G+VG PI E + G + VRG V +
Sbjct: 370 YGLTETTAGLSFNRSHFIKFGTVGQPI----------EDAVAVKIAGDGEICVRGKIVFK 419
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GYF NP AT++A+DE+GW +TGDIG G L + R KD IV + G+N
Sbjct: 420 GYFNNPQATREAIDEEGWFHTGDIGEF----------DTDGFLKITDRKKDIIVTAGGKN 469
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 424
+ P +E + I Q +V G ++ A++V D+++VL AK I A EL
Sbjct: 470 IAPQSIENHMITDPFISQFIVHGDKRKFLSALVVLDRDQVLRFAKEHDIPFASYEEL 526
>gi|448677650|ref|ZP_21688840.1| long-chain fatty-acid-CoA ligase [Haloarcula argentinensis DSM
12282]
gi|445773325|gb|EMA24358.1| long-chain fatty-acid-CoA ligase [Haloarcula argentinensis DSM
12282]
Length = 660
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 168/351 (47%), Gaps = 64/351 (18%)
Query: 74 KFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ ++ LP HV+ER G +F+++ G + Y + L DDLQ +P +SVP VYE ++
Sbjct: 264 RSIAFLPLAHVFERLAGHFFMYASGAAVSYAESPDTLADDLQTVKPMTGLSVPRVYERIF 323
Query: 132 SGIQKQIFTSSAARRV------VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 185
++ Q S +R+ VAR R N P
Sbjct: 324 DNMRTQASESPLKKRIFDWSMDVAREYART------------------NNPGP------- 358
Query: 186 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 244
IL H LA++LVY ++ +G + + VSGGGSL + + +G+ +
Sbjct: 359 ----------ILTAKHSLADRLVYSTVKERLGGNIEFMVSGGGSLSKTLCETFLGMGLTI 408
Query: 245 QVGYGLTESSPVIAARRPTCNVLGSVGHPIN----HTEIKIVDA-ETNEVLPAGSKGIVK 299
GYGLTE+SPV+ P G++G P+ H + +VDA E ++V G G +
Sbjct: 409 LEGYGLTETSPVLTVNPPEDTRPGTLGAPLPNVDVHIDTGVVDASEFDDV--TGDVGELL 466
Query: 300 VRGSQVMQGYFKNPSATKQALDE-DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
V G V GY+ P AT +A E DG W TGDI R L+ R
Sbjct: 467 VDGPNVTAGYWNAPDATTRAFTEIDGTQWFRTGDI----------VERTDDDFLIYHDRL 516
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
K+ +VLSTG+NV P +E+ S + Q++V+G DQ+ GAIIVP+ EE+
Sbjct: 517 KELLVLSTGKNVAPQPIEDQFATSDRVDQVMVVGDDQKFVGAIIVPNFEEL 567
>gi|83815604|ref|YP_445334.1| acyl-CoA synthetase, long-chain-fatty acid:CoA ligase [Salinibacter
ruber DSM 13855]
gi|83756998|gb|ABC45111.1| putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase
[Salinibacter ruber DSM 13855]
Length = 632
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 173/382 (45%), Gaps = 61/382 (15%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + D G+ +S LP HV+ R Y RGI + + +L D L + +P
Sbjct: 232 IAEIDDFETGPEGEVVISFLPLTHVFARMLQYAYMMRGISIYFAHPDDLVDALPKVRPTV 291
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
SVP V E +Y+GI+K++ ++ + ++++ Y +TR+Q
Sbjct: 292 FASVPRVLEKVYAGIKKKVMGMQGLQKRIGEWGLQVAQDYD----------MTRSQP--- 338
Query: 180 YLVALIDWLWARIICAILWPLHLL----AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
PL+ L A++LV++K ++A G K V GG +L +
Sbjct: 339 -------------------PLYALKRAAADRLVFRKWRAAFGGRVKYVVVGGAALQPDLA 379
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
A + GYGLTE+SPVI+ RP N G+VG P+ E+KI AE E+L
Sbjct: 380 NILAAADITTLQGYGLTETSPVISYTRPQRNKPGTVGEPLPGVEVKI--AEDGEIL---- 433
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
RG VMQGY+K P T ++E+GWL+TGDIG G L +
Sbjct: 434 -----TRGPHVMQGYYKAPDETDAVMEENGWLHTGDIGEFDED----------GFLKITD 478
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII--VPDKEEVLMAAK 412
R K LSTG+ V P +E L+ VV+G+D++ A++ PD+ + L + +
Sbjct: 479 RKKALFKLSTGKYVMPQPIENRMGSDPLVDNAVVVGRDRKFCAALLFPAPDQAQALASER 538
Query: 413 RLSIVHADASELSKEKTISLLY 434
L D +L E I Y
Sbjct: 539 GLG-AERDIEDLLTEPDIVNAY 559
>gi|52426320|ref|YP_089457.1| FAA1 protein [Mannheimia succiniciproducens MBEL55E]
gi|52308372|gb|AAU38872.1| FAA1 protein [Mannheimia succiniciproducens MBEL55E]
Length = 592
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 187/408 (45%), Gaps = 66/408 (16%)
Query: 38 LFSFVLIDLNTWMPIPKMTNF-----QIRS----LYDIVPAENGDKFLSMLPPWHVYERA 88
LF+ + T P M +F Q++S L D+V E D LS LP H++ERA
Sbjct: 182 LFTLIYTSGTTGDPKGVMLDFSNLAHQLKSHDLALPDVVGRE--DVSLSFLPLSHIFERA 239
Query: 89 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 147
++ RG + Y N +++ L +P M +VP +YE +YS IQ ++ + RR+
Sbjct: 240 WVAYVLHRGAVVCYLESTNEVRNALTELKPSLMCAVPRLYEKMYSAIQDKVIHAPLHRRM 299
Query: 148 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 207
+ F + I +G QK W H +A+KL
Sbjct: 300 L--------FQWA----INQGQKFAHTQKST----------WR----------HKIADKL 327
Query: 208 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 266
V K+++ +G + K GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 328 VLSKLRNLLGGNIKMMPCGGAKLEGKIGEFFHAIGINVKLGYGMTETTATVSCWADKHFN 387
Query: 267 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 326
S+G + + E+KI E NE+L VRG VM+GY+ N + T +A EDG+
Sbjct: 388 AASIGRLMPNAEVKI--GENNEIL---------VRGGMVMKGYYNNSAETAKAFTEDGFF 436
Query: 327 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 386
TGD G + G L + R K+ + S G+ + P +E + I QI
Sbjct: 437 KTGDAGEFDEN----------GNLYITDRIKELMKTSNGKYIAPQYIEGKLGKDKFIEQI 486
Query: 387 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 434
VI ++ A+IVP E + AK+L+I + D EL K I L+
Sbjct: 487 AVIADAKKYVSALIVPSFEALEDYAKQLNIKYQDRLELIKHSEIIKLF 534
>gi|294507212|ref|YP_003571270.1| long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
gi|294343540|emb|CBH24318.1| Long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
Length = 632
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 173/382 (45%), Gaps = 61/382 (15%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 119
I + D G+ +S LP HV+ R Y RGI + + +L D L + +P
Sbjct: 232 IAEIDDFETGPEGEVVISFLPLTHVFARMLQYAYMMRGISIYFAHPDDLVDALPKVRPTV 291
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
SVP V E +Y+GI+K++ ++ + ++++ Y +TR+Q
Sbjct: 292 FASVPRVLEKVYAGIKKKVMGMQGLQKRIGEWGLQVAQDYD----------MTRSQP--- 338
Query: 180 YLVALIDWLWARIICAILWPLHLL----AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
PL+ L A++LV++K ++A G K V GG +L +
Sbjct: 339 -------------------PLYALKRAAADRLVFRKWRAAFGGRVKYVVVGGAALQPDLA 379
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
A + GYGLTE+SPVI+ RP N G+VG P+ E+KI AE E+L
Sbjct: 380 NILAAADITTLQGYGLTETSPVISYTRPQRNKPGTVGEPLPGVEVKI--AEDGEIL---- 433
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
RG VMQGY+K P T ++E+GWL+TGDIG G L +
Sbjct: 434 -----TRGPHVMQGYYKAPDETDAVMEENGWLHTGDIGEFDED----------GFLKITD 478
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII--VPDKEEVLMAAK 412
R K LSTG+ V P +E L+ VV+G+D++ A++ PD+ + L + +
Sbjct: 479 RKKALFKLSTGKYVMPQPIENRMGSDPLVDNAVVVGRDRKFCAALLFPAPDQAQALASER 538
Query: 413 RLSIVHADASELSKEKTISLLY 434
L D +L E I Y
Sbjct: 539 GLG-AERDIEDLLTEPDIVDAY 559
>gi|341613314|ref|ZP_08700183.1| putative long-chain-fatty-acid--CoA ligase (long-chain acyl-CoA
synthetase) [Citromicrobium sp. JLT1363]
Length = 603
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 187/413 (45%), Gaps = 72/413 (17%)
Query: 63 LYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYM 120
L D + ++FLS LP H YE G F+ G ++ Y + L +++ P M
Sbjct: 220 LIDDFKLSDDERFLSFLPLSHAYEHTGGQFLPIGVGAQIFYAEGLEKLASNIEETSPTVM 279
Query: 121 ISVPLVYETLYSGIQKQIFT-SSAARRVVARAL-IRISFAYTAFKRIYEGFCLTRNQKQP 178
+ VP ++E L + I KQI AA ++ RAL I KR+ +
Sbjct: 280 VVVPRLFEVLRTRIMKQIAKQGGAASYLMDRALEIEERAGPNGKKRLRDK---------- 329
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
P+ LL +L+ KI+ G KA VSGG L + F+
Sbjct: 330 --------------------PMDLLVGRLLRPKIRQKFGGRIKAMVSGGAPLNPEVGTFF 369
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+A+G+ + GYG TE+ PVI+ RP+ V + +VG P+ EI+I AE E+L
Sbjct: 370 QALGLPMMQGYGQTEAGPVISCNRPSAGVSMDTVGPPMKGVEIRI--AEDGEIL------ 421
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
RG VM GY++N T +AL +DGWL+TGDIG I +GR +V+ R
Sbjct: 422 ---CRGELVMHGYWQNQPETDRAL-QDGWLHTGDIGHI---DDKGR-------IVITDRK 467
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP--GAIIVPDKEEVLMAAKRL 414
KD IV G+NV P ++E I Q +V G RRP +IVPD E L K
Sbjct: 468 KDMIVNDKGDNVAPQKVEGMLTLQPEIGQAMVAG--DRRPYIVGLIVPDAEWALDWCK-- 523
Query: 415 SIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVV------DEPFTVN 461
+ +K + + +RK + + ++ + V DEPF++
Sbjct: 524 --AQGKPLDCAKAQELPEFRAAIRKAVDRVNSELSVVEKVRGFAFADEPFSIE 574
>gi|430760195|ref|YP_007216052.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430009819|gb|AGA32571.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 625
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 169/361 (46%), Gaps = 47/361 (13%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRY 115
F + P D FLS LP H ER G F+ G E+++ ++ L +DL+
Sbjct: 230 FNAHAASRCAPLGGEDVFLSFLPLSHTLERTAGCFLPMVVGAEVVFARSIPQLAEDLRVV 289
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
QP ++SVP +YE++Y+ IQ + SA R++ R + +A F+ I Q
Sbjct: 290 QPTVLVSVPRIYESVYAKIQAGLKQKSALARLLFRTTVDAGWAR--FEHI---------Q 338
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL 235
++ W+ + L+A K+ ++ G + V GG LP I
Sbjct: 339 QRAG---------WSPRLLLWPLLGRLVAHKV----LERLGGRLEYAVCGGAPLPPSIAR 385
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ +G+ V GYGLTE+SPV+ RP N+ S+G P+ EI+I E +E+L
Sbjct: 386 FFIGLGLPVYHGYGLTEASPVVTVNRPDENLPASIGKPLPGVEIRI--GEQDELL----- 438
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
R VM GY+++ AT +D DGWL+TGD I G + + GR
Sbjct: 439 ----TRSPSVMLGYWRDDEATAATIDPDGWLHTGDKARIDAQ----------GFVFITGR 484
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
KD IVL GE V P ++E + L Q++VIG+ + A++V D A+ L
Sbjct: 485 IKDIIVLGNGEKVPPADMEMSIQLDPLFDQVLVIGEGRAFLSALVVLDAAAWREYARELD 544
Query: 416 I 416
+
Sbjct: 545 V 545
>gi|148263653|ref|YP_001230359.1| AMP-dependent synthetase and ligase [Geobacter uraniireducens Rf4]
gi|146397153|gb|ABQ25786.1| AMP-dependent synthetase and ligase [Geobacter uraniireducens Rf4]
Length = 603
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 168/352 (47%), Gaps = 50/352 (14%)
Query: 76 LSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV ER GY++ +M A + + +++ +P M+SVP ++E +YS
Sbjct: 227 LSFLPLSHVLERTIGYYMMIMNGSMMAFADSIEKVPENMMEVKPTVMVSVPRLFEKIYSR 286
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I + + S +R + I + Y + I +K+ S L+A
Sbjct: 287 IFENVHQMSVVKRKLFHWAIEVGKKYVEARYI---------EKRTSPLLAF--------- 328
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
+ +A++LV+ K++ G + + SGG L I+ F+ IG+ + GYGLTE
Sbjct: 329 ------KYNVADRLVFGKLRERFGGNMRLFCSGGAPLDKTINEFFWIIGLPILEGYGLTE 382
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 312
+SP ++ GSVG + HTEIK AE E+L +RG Q+M GY+K
Sbjct: 383 TSPAVSFNNFDQVRFGSVGTALEHTEIKT--AEDGELL---------IRGPQIMTGYYKE 431
Query: 313 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 372
P+AT ++L +DGW TGDIG+I G + + R K+ I+ + G+N+ P
Sbjct: 432 PAATGESL-QDGWFKTGDIGYIE-----------NGFVYITDRKKELIITAGGKNIAPQP 479
Query: 373 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 424
LE I V G + A++VP+ E +L A+ I + D +L
Sbjct: 480 LENELKLDKYISSAFVYGDRKPYLTALLVPNMERLLEFAREKHIDYYDMDDL 531
>gi|435845642|ref|YP_007307892.1| AMP-forming long-chain acyl-CoA synthetase [Natronococcus occultus
SP4]
gi|433671910|gb|AGB36102.1| AMP-forming long-chain acyl-CoA synthetase [Natronococcus occultus
SP4]
Length = 660
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 183/396 (46%), Gaps = 58/396 (14%)
Query: 59 QIRSLYDIVPAENGDKF---------LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRN 107
Q+R Y P + GD+ +S LP HV+ER G+F+ F+ G + Y +
Sbjct: 237 QVRRRYGPRP-DKGDEVPVIDETKQAVSYLPLAHVFERTAGHFLMFASGACVAYAESTDT 295
Query: 108 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 167
LK+D QP SVP VYE +Y I++Q S A KRI+E
Sbjct: 296 LKEDFGTVQPDTATSVPRVYEKIYDTIREQASESGAK------------------KRIFE 337
Query: 168 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 226
Q Q A +L LA+KLV+ ++ A+G + +SGG
Sbjct: 338 WATDVGVQYQE-----------ADDPGPVLGAKQALADKLVFSNVREALGGEIELLISGG 386
Query: 227 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 286
GSL + Y A+G+ + GYGLTE++PV++ P +G++G + ++++ + T
Sbjct: 387 GSLSKELCTLYHAMGLPIYEGYGLTETAPVVSVNPPEEPRIGTIGPALPGVDVRVDGSVT 446
Query: 287 NEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQA-LDEDG--WLNTGDIGWIAPHHSRG 341
E G G + V G V +GY+ P AT ++ +EDG W TGDI + P
Sbjct: 447 GEETFDDPGEIGELLVSGPNVAEGYWNKPGATTESFFEEDGSRWFRTGDIVHLRPDD--- 503
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
+ R K +VLSTG+NV P +E+A S ++ Q +V+G ++ GA+IV
Sbjct: 504 -------YIEFRDRVKQILVLSTGKNVAPGPIEDAFAASEVVEQCMVVGDGEKFVGALIV 556
Query: 402 PDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGE 436
P+ + + A I + D + ++ + GE
Sbjct: 557 PNTDHIREWADEQGIDLPDDPQAMCDDERVQEYVGE 592
>gi|262404795|ref|ZP_06081350.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC586]
gi|262349827|gb|EEY98965.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC586]
Length = 601
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 182/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V +++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVAHVRDALGEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q QPS+L+A
Sbjct: 280 SAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-RQQQHQPSWLLA-------- 322
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 323 -------QSHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ I+ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATISCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLEKETSESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|390948342|ref|YP_006412102.1| AMP-forming long-chain acyl-CoA synthetase [Alistipes finegoldii
DSM 17242]
gi|390424911|gb|AFL79417.1| AMP-forming long-chain acyl-CoA synthetase [Alistipes finegoldii
DSM 17242]
Length = 635
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 190/408 (46%), Gaps = 62/408 (15%)
Query: 74 KFLSMLPPWHVYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISV 123
+ L +LP H + G++I G M T ++N+ +++ +PH+++SV
Sbjct: 218 RTLIILPLDHCFAHVVGFYIMIACGATVATVQVGATPMET-LKNIPQNIREVRPHFLLSV 276
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P + + I+ I + +R ++ Y +G+ R Q
Sbjct: 277 PALAKNFRKNIEGSIRAKGRFTERLFNLALRTAYLYNK-----DGYG--RGQ-------- 321
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
W +LWP L + ++++K++ A G S + V GG L + F+ AIG+
Sbjct: 322 --GW------RVLLWPAVRLFDAVLFRKVREAFGGSLRFFVGGGALLDAELQRFFYAIGI 373
Query: 243 KVQVGYGLTESSPVIAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
+ GYGL+E++PVI+ P + GS G + ++KIVD EV P G KG + +
Sbjct: 374 PMFQGYGLSEATPVISTNSPKYHWHRFGSSGKILIPLDLKIVDEAGREV-PRGEKGEIVI 432
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 360
RG VM GY+KNP A+ + + DGWL+TGD+G+++ L + GR K +
Sbjct: 433 RGENVMAGYWKNPEASAETV-RDGWLHTGDMGYVSKDD----------FLYVLGRFKSLL 481
Query: 361 VLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
+ S GE P +EEA + +S I QI++ GAI+VP++E A +R
Sbjct: 482 IASDGEKYSPEGMEEAIVDKSPYIDQIIIHNNQSPFTGAIVVPNRE----ALRRELDSRG 537
Query: 420 DASELSKEKTISLLYGELRKWTSKCSFQ--------IGPIHVVDEPFT 459
A E E +L GE+ ++ + F + +VDEPFT
Sbjct: 538 IAGEKRAETAAEILGGEIDRYRAGGVFGGEFPERWLPAGLAIVDEPFT 585
>gi|375129923|ref|YP_004992022.1| long-chain-fatty-acid--CoA ligase-like protein [Vibrio furnissii
NCTC 11218]
gi|315179096|gb|ADT86010.1| hypothetical long-chain-fatty-acid--CoA ligase-like protein [Vibrio
furnissii NCTC 11218]
Length = 604
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 192/431 (44%), Gaps = 60/431 (13%)
Query: 35 DLPLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHVYERAC 89
D LF+ + T P M ++ Q+ + D L LP HV+ERA
Sbjct: 177 DDDLFTLIYTSGTTGKPKGVMLDYCNVGAQLEGHDQRLNLSQDDVSLCFLPLSHVFERAW 236
Query: 90 GYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 148
+++ +G Y V ++D L + +P M +VP YE ++S I +++ + R+V+
Sbjct: 237 SFYVLYKGATNCYLQDVGQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVARAPLHRKVM 296
Query: 149 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 208
F ++ C + ++ PS WA C H LA+KLV
Sbjct: 297 --------FTWSVNMGAKMARC-HQEKRTPS---------WALKQC------HQLADKLV 332
Query: 209 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 267
K++ +G + GG L I F+ AIG+ V++GYG+TE++ I+ C
Sbjct: 333 LSKLRGLLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDQCFDP 392
Query: 268 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 327
S+G + ++KI E NE+L VRG VM+GY+K P T Q DE G+L
Sbjct: 393 DSIGMTMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAQTFDEHGFLK 441
Query: 328 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 387
TGD G I G L + R K+ + S G+ + P +E A + + QI
Sbjct: 442 TGDAGHIDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFVEQIA 491
Query: 388 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRK 439
VI ++ A+IVP + + AK L+I + D EL K EK ++ L L K
Sbjct: 492 VIADTRKFVSALIVPCFDALEEHAKELNIKYHDRLELLKHSQIIEMFEKRVNELQHGLAK 551
Query: 440 WTSKCSFQIGP 450
+ F++ P
Sbjct: 552 FEQVKRFKLLP 562
>gi|319940752|ref|ZP_08015093.1| AMP-dependent synthetase and ligase [Sutterella wadsworthensis
3_1_45B]
gi|319805812|gb|EFW02586.1| AMP-dependent synthetase and ligase [Sutterella wadsworthensis
3_1_45B]
Length = 609
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 178/361 (49%), Gaps = 44/361 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
+++ + V + GD FLS LP H +ER GY++ + G + Y +V L +DL+ +
Sbjct: 212 NVKATLECVSPKVGDTFLSFLPLSHTFERTAGYYLALATGCIIAYNRSVLLLAEDLKTIK 271
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P +ISVP VYE +Y+ +Q ++ S R +A+ L F + A + + FC R
Sbjct: 272 PTVIISVPRVYERIYARVQDKLRKS----RPIAKKL----FDW-AVEVGWRDFC--RKNH 320
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLF 236
P WL I+ A L LH +A L + G + +SGG +L +
Sbjct: 321 LPVEKSGR-SWL-DGIVRATL--LHKMANTL----LSQFGGRLRIAISGGAALNHKVART 372
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+ +G+ + GYG+TE+SP+IA N +VG P + EI++ E NE+
Sbjct: 373 FCGLGLPIIQGYGMTEASPIIAGNCVEFNQPDTVGKPFCNVEIRL--GEGNEI------- 423
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+VR +M+GY+ P T A +DGWL TGD+G G+L ++GR
Sbjct: 424 --QVRAPSIMKGYWHRPEDTAAAFTKDGWLKTGDVGEF----------NADGMLKIKGRI 471
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG--AIIVPDKEEVLMAAKRL 414
K+ IV STGE + P +LE A L Q ++G+++ G A++ P++ L A+ L
Sbjct: 472 KEIIVTSTGEKIPPADLESAIETDPLFAQAYIVGENKPYLGLLAVVEPNEWASLAASLNL 531
Query: 415 S 415
Sbjct: 532 D 532
>gi|254229751|ref|ZP_04923159.1| putative long-chain-fatty-acid--CoA ligase homolog [Vibrio sp.
Ex25]
gi|262392424|ref|YP_003284278.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
gi|151937718|gb|EDN56568.1| putative long-chain-fatty-acid--CoA ligase homolog [Vibrio sp.
Ex25]
gi|262336018|gb|ACY49813.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
Length = 602
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 182/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L + +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSQVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + A + ++QPS +
Sbjct: 280 SAIHEKVSRAPIHRKIMFTWAVNMGAKMAA---------CHQEKRQPSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|334366829|ref|ZP_08515752.1| AMP-binding enzyme [Alistipes sp. HGB5]
gi|313157026|gb|EFR56458.1| AMP-binding enzyme [Alistipes sp. HGB5]
Length = 635
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 190/408 (46%), Gaps = 62/408 (15%)
Query: 74 KFLSMLPPWHVYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISV 123
+ L +LP H + G++I G M T ++N+ +++ +PH+++SV
Sbjct: 218 RTLIILPLDHCFAHVVGFYIMIACGATVATVQVGATPMET-LKNIPQNIREVRPHFLLSV 276
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P + + I+ I + +R ++ Y +G+ R Q
Sbjct: 277 PALAKNFRKNIEGSIRAKGRFTERLFNLALRTAYLYNK-----DGYG--RGQ-------- 321
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
W +LWP L + ++++K++ A G S + V GG L + F+ AIG+
Sbjct: 322 --GW------RVLLWPAVRLFDAVLFRKVREAFGGSLRFFVGGGALLDAELQRFFYAIGI 373
Query: 243 KVQVGYGLTESSPVIAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
+ GYGL+E++PVI+ P + GS G + ++KIVD EV P G KG + +
Sbjct: 374 PMFQGYGLSEATPVISTNSPKYHWHRFGSSGKILIPLDLKIVDEAGREV-PRGEKGEIVI 432
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 360
RG VM GY+KNP A+ + + DGWL+TGD+G+++ L + GR K +
Sbjct: 433 RGENVMAGYWKNPEASAETV-RDGWLHTGDMGYVSKDD----------FLYVLGRFKSLL 481
Query: 361 VLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
+ S GE P +EEA + +S I QI++ GAI+VP++E A +R
Sbjct: 482 IASDGEKYSPEGMEEAIVDKSPYIDQIIIHNNQSPFTGAIVVPNRE----ALRRELDSRG 537
Query: 420 DASELSKEKTISLLYGELRKWTSKCSFQ--------IGPIHVVDEPFT 459
A E E +L GE+ ++ + F + +VDEPFT
Sbjct: 538 IAGEKRAETAAEILGGEIDRYRAGGVFGGEFPERWLPAGLAIVDEPFT 585
>gi|261211577|ref|ZP_05925865.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC341]
gi|260839532|gb|EEX66158.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC341]
Length = 601
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 182/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V +++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS+L
Sbjct: 280 SAIHEKVAKAPLIRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE+G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLEKETAESFDENGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|377573521|ref|ZP_09802577.1| long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC
104925]
gi|377537636|dbj|GAB47742.1| long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC
104925]
Length = 607
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 178/395 (45%), Gaps = 51/395 (12%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIE-LMYTAVRNLKDDLQRYQPHYMISVPLVYETL 130
G++ +S LP H YER Y + G+E T + + + +P +SVP +YE +
Sbjct: 231 GERNMSFLPLSHAYERGWTYCALASGMENCSVTDPKTVAAAMLDIRPATFVSVPRLYEKV 290
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+G Q+ RR+ AL R+ G + R +++
Sbjct: 291 YAGAH-QLAGEGVKRRLFDWAL-RV------------GADVQRRRRE------------G 324
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYG 249
R + L H LA++LV ++ +G K ++ GG+ L ++ F+ A G+ + GYG
Sbjct: 325 RPVPRTLAARHALADRLVLHNVRDVVGGEKYVMAAGGAPLRQEVEEFFLAAGLPIYQGYG 384
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE++P+++ P G+ G P+ TE++I D ET E+L VRG V GY
Sbjct: 385 LTETAPLVSCNAPGAVKSGTAGRPVPGTEVRISD-ETGEIL---------VRGDNVTPGY 434
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ P T +DE+GW +TGD+G + G L++ R KD IV G+N+
Sbjct: 435 YNRPEETAAVIDEEGWFHTGDVGHL----------DADGYLLITDRIKDLIVTMQGKNIA 484
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 429
P +E A L+ VVIG + A+I P EE+ A+ EL
Sbjct: 485 PGPIESALTADPLVEAAVVIGDGRPYLTALIQPSFEELEHRAREKGWASDSTEELLARGE 544
Query: 430 ISLLYGELRKWTSKCSF---QIGPIHVVDEPFTVN 461
+ Y +L + S +I ++ EP T++
Sbjct: 545 VEQYYDDLIARVGRDSARYERIQKFRLLSEPLTMD 579
>gi|228472919|ref|ZP_04057676.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228275501|gb|EEK14278.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 592
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 185/412 (44%), Gaps = 77/412 (18%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQP 117
I++ ++ VP ++GD LS LP HV+ER Y GI L + + + ++ +P
Sbjct: 201 NIKNCHERVPVKSGDICLSFLPVCHVFERMLTYLYQYNGIRLYFAESFEKVAVNIGEVKP 260
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL----IRISFAYTAFKRIYEGFCLTR 173
+ VP V E +Y I ++ A +A++L +R+ + Y +
Sbjct: 261 RLITVVPRVVEKVYDSI----YSKGVALSGIAKSLFFWALRLGYQYEPY----------- 305
Query: 174 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHI 233
NQK Y + L +A KL++ K + A+G + G +L +
Sbjct: 306 NQKGWWYSLKL-----------------KIARKLIFSKWKKALGGQLQMICGSAALQPRL 348
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV--LGSVGHPINHTEIKIVDAETNEVLP 291
+ A G+ + GYGLTE+SPVI+ ++ +G++G PI+H E+KI AE E+L
Sbjct: 349 VRVFSAAGIPIWEGYGLTETSPVISVNCKKGHLWKIGTIGKPIDHIEVKI--AEDGEIL- 405
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
+GS +M GY+KN T A+DEDG+ +TGDIG++ G L
Sbjct: 406 --------CKGSNIMLGYYKNEEQTHNAIDEDGFFHTGDIGFLDKE----------GFLT 447
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
+ R K+ S G+ + P +E +S I Q +V+G+ ++ P A + + V
Sbjct: 448 ITDRKKEMFKTSGGKYIAPQYIENKLKQSRFIEQAMVVGEGEKMPAAFLQVNFAFVREWL 507
Query: 412 KRLSIVHADASELSKE-------------KTISLLYGELRKWTSKCSFQIGP 450
KR H D LS E + + + +L KW +F + P
Sbjct: 508 KR----HGDKQTLSNEALVKDERVRERITQEVERINKKLGKWEQIKAFDLTP 555
>gi|448347151|ref|ZP_21536030.1| AMP-dependent synthetase and ligase [Natrinema altunense JCM 12890]
gi|445631488|gb|ELY84720.1| AMP-dependent synthetase and ligase [Natrinema altunense JCM 12890]
Length = 673
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 172/372 (46%), Gaps = 70/372 (18%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G+F+ F+ G + Y + L++D +P SVP VYE +Y G
Sbjct: 262 LSYLPLAHVFERTAGHFVLFASGACIAYAESPDTLREDFGLVEPTTATSVPRVYEKIYDG 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+++ S+A +R+ A + AY + + P
Sbjct: 322 IREEASQSAAKQRIFEWA-TDVGVAY-------------QQAESPG-------------- 353
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
IL LA+ LV+ ++ A+G + + +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 354 -PILSAKQALADTLVFSTVREALGGNIEILISGGGSLSPELCRLYHAMGLPIFEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK---VRGSQVMQGY 309
++P++A P +G++G P+ + E+ + + ++ A G V VRG V QGY
Sbjct: 413 TAPIVATNPPEAAKIGTIGPPLFNVEVTVDETVADQEAFADDPGEVGELLVRGPNVTQGY 472
Query: 310 FKNPSATKQAL---------------DEDG----------WLNTGDIGWIAPHHSRGRSR 344
+ P AT+ A D D W TGDI + P
Sbjct: 473 WDKPGATEGAFIDVAPGEASRSSESRDTDAGEESAASSGQWFRTGDIIHVRPD------- 525
Query: 345 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 404
G L R K IVLSTG+NV P +E+A S ++ Q +V+G ++ GA++VP+
Sbjct: 526 ---GYLEFRDRVKQIIVLSTGKNVAPGPIEDAFAASEIVEQAMVVGDGEKFIGALLVPNT 582
Query: 405 EEVLMAAKRLSI 416
+ V A+ I
Sbjct: 583 DHVREWAESAGI 594
>gi|55377892|ref|YP_135742.1| long-chain fatty-acid-CoA ligase [Haloarcula marismortui ATCC
43049]
gi|55230617|gb|AAV46036.1| long-chain fatty-acid-CoA ligase [Haloarcula marismortui ATCC
43049]
Length = 660
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 50/344 (14%)
Query: 74 KFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ ++ LP HV+ER G +F+++ G + Y + L DDLQ +P +SVP VYE ++
Sbjct: 264 RSIAFLPLAHVFERLAGHFFMYASGAAVSYAESPDTLADDLQTVKPMTGLSVPRVYERIF 323
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
++ Q S +R+ ++ + + T N
Sbjct: 324 DNMRTQASESPLKKRIFDWSM-----------DVAREYARTENP---------------- 356
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
IL H LA++LVY ++ +G + + VSGGGSL + + +G+ + GYGL
Sbjct: 357 --GPILTAKHSLADRLVYSTVKERLGGNIEFMVSGGGSLSKTLCETFLGMGLTILEGYGL 414
Query: 251 TESSPVIAARRPTCNVLGSVGHPIN----HTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
TE+SPV++ P G++G P+ H + +VDA + + G G + V G V
Sbjct: 415 TETSPVLSVNPPEDIRPGTLGAPLPAVDVHIDTGVVDASEFDGV-TGDVGELLVDGPNVT 473
Query: 307 QGYFKNPSATKQALDE-DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
QGY+ P AT +A E DG W TGDI R L+ R K+ +VLS
Sbjct: 474 QGYWNAPDATARAFTEIDGTQWFRTGDI----------VERTDDDFLIYHDRLKELLVLS 523
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
TG+NV P +E+ + + Q++V+G DQ+ GAIIVP+ EE+
Sbjct: 524 TGKNVAPQPIEDQFATNDRVDQVMVVGDDQKFVGAIIVPNFEEL 567
>gi|394990014|ref|ZP_10382846.1| hypothetical protein SCD_02439 [Sulfuricella denitrificans skB26]
gi|393790279|dbj|GAB72485.1| hypothetical protein SCD_02439 [Sulfuricella denitrificans skB26]
Length = 554
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 164/335 (48%), Gaps = 53/335 (15%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
+ + ++V GD +S+LP H++ER CGY++ G+ + Y ++ L +DL +
Sbjct: 188 NVAAALEVVSLHPGDLLISVLPLSHMFERTCGYYVPLKAGVPVAYARSINQLAEDLAFLK 247
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M++VP V++ + I+ Q T+S +R + + ++ + F+R R+ K
Sbjct: 248 PTVMVAVPRVFQRFLARIE-QALTASPLKRALFS--LTVALGWRKFER--------RSGK 296
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLF 236
L L+ L A + L+ L ++ + V GG L + +
Sbjct: 297 VEQALFQLLQPLVAGPV------LNRLGGRM------------RLAVVGGAPLELRVAQS 338
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+ +G+ + GYGLTE+SP++A R N +VG P+ E+++ D G
Sbjct: 339 FIGLGLNMLQGYGLTEASPIVAGNREYDNDPITVGAPLPGVEVRVNDV-----------G 387
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+ VRG VM GY+ NP A+ + LD DGWLNTGD+ I ++++GR
Sbjct: 388 ELLVRGPSVMLGYWHNPEASAEVLDADGWLNTGDLVEIPADK-----------IIIKGRT 436
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 391
KD +VLS GE V P + E A L L Q++++G+
Sbjct: 437 KDILVLSNGEKVSPQDAEMAILDDPLFEQVMLVGE 471
>gi|422911306|ref|ZP_16945932.1| AMP-binding enzyme family protein [Vibrio cholerae HE-09]
gi|341631825|gb|EGS56702.1| AMP-binding enzyme family protein [Vibrio cholerae HE-09]
Length = 601
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 181/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ RG Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYRGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G K GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQLADKLVLSKLRALLGGRIKFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|260771297|ref|ZP_05880224.1| long-chain-fatty-acid--CoA ligase [Vibrio furnissii CIP 102972]
gi|260613894|gb|EEX39086.1| long-chain-fatty-acid--CoA ligase [Vibrio furnissii CIP 102972]
Length = 604
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 192/431 (44%), Gaps = 60/431 (13%)
Query: 35 DLPLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHVYERAC 89
D LF+ + T P M ++ Q+ + D L LP HV+ERA
Sbjct: 177 DDDLFTLIYTSGTTGKPKGVMLDYRNVGAQLEGHDQRLNLSQDDVSLCFLPLSHVFERAW 236
Query: 90 GYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 148
+++ +G Y V ++D L + +P M +VP YE ++S I +++ + R+V+
Sbjct: 237 TFYVLYKGATNCYLQDVGQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVARAPLHRKVM 296
Query: 149 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 208
F ++ C + ++ PS WA C H LA+KLV
Sbjct: 297 --------FTWSVNMGAKMARC-HQEKRTPS---------WALKQC------HQLADKLV 332
Query: 209 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 267
K++ +G + GG L I F+ AIG+ V++GYG+TE++ I+ C
Sbjct: 333 LSKLRGLLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDQCFDP 392
Query: 268 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 327
S+G + ++KI E NE+L VRG VM+GY+K P T Q DE G+L
Sbjct: 393 DSIGMTMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAQTFDEHGFLK 441
Query: 328 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 387
TGD G I G L + R K+ + S G+ + P +E A + + QI
Sbjct: 442 TGDAGHIDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFVEQIA 491
Query: 388 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRK 439
VI ++ A+IVP + + AK L+I + D EL K EK ++ L L K
Sbjct: 492 VIADTRKFVSALIVPCFDALEEHAKELNIKYHDRLELLKHSQIIEMFEKRVNELQHGLAK 551
Query: 440 WTSKCSFQIGP 450
+ F++ P
Sbjct: 552 FEQVKRFKLLP 562
>gi|344211955|ref|YP_004796275.1| long-chain fatty-acid-CoA ligase [Haloarcula hispanica ATCC 33960]
gi|343783310|gb|AEM57287.1| long-chain fatty-acid-CoA ligase [Haloarcula hispanica ATCC 33960]
Length = 660
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 167/344 (48%), Gaps = 50/344 (14%)
Query: 74 KFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ ++ LP HV+ER G +F+++ G + Y + L DDLQ +P +SVP VYE ++
Sbjct: 264 RSIAFLPLAHVFERLAGHFFMYASGAAVSYAESPDTLADDLQTVKPMTGLSVPRVYERIF 323
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
++ Q S +R+ ++ + + T +
Sbjct: 324 DNMRTQASESPLKKRIFDWSM-----------DVARDYARTDDP---------------- 356
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
IL H LA++LVY ++ +G + + VSGGGSL + + +G+ + GYGL
Sbjct: 357 --GPILTAKHSLADRLVYSTVKERLGGNIEFMVSGGGSLSKTLCETFLGMGLTILEGYGL 414
Query: 251 TESSPVIAARRPTCNVLGSVGHPIN----HTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
TE+SPV+ P G++G P+ H + +VDA + + G G + V G V
Sbjct: 415 TETSPVLTVNPPEDVRPGTLGAPLTEVDVHIDTDVVDASEFDGV-TGDVGELLVDGPNVT 473
Query: 307 QGYFKNPSATKQALDE-DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
QGY+ P AT +A E DG W TGDI R L+ R K+ +VLS
Sbjct: 474 QGYWNAPDATTRAFTEIDGTQWFRTGDI----------VERTDDDFLIYHDRLKELLVLS 523
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
TG+NV P +E+ + + Q++V+G DQ+ GAIIVP+ EE+
Sbjct: 524 TGKNVAPQPIEDQFATNDRVDQVMVVGDDQKFVGAIIVPNFEEL 567
>gi|221066952|ref|ZP_03543057.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220711975|gb|EED67343.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 648
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 188/396 (47%), Gaps = 49/396 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H +ER GY++ + G + Y +V L D+++ +P +ISVP +YE +
Sbjct: 257 DVFLSFLPLSHTFERTAGYYLAIATGSCVAYARSVAQLAQDMKQVKPTVLISVPRIYERV 316
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI--YEGFCLTRN-QKQPSYLVALIDW 187
Y+ +Q+ + +SS R++ A+ + +KR +G L+ Q S+ AL W
Sbjct: 317 YAKVQESLASSSLKRKLFEAAVNK------GWKRFCARQGIPLSEQLDAQASWASALPAW 370
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
L ++ L L +L + VSGG L I + +G+ + G
Sbjct: 371 LLRSLVAQPL--LAQFGGRL------------RVAVSGGAPLSPTIARCFLGLGLPMLQG 416
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++PV++A N +VG + E++I D + ++V G VM+
Sbjct: 417 YGMTETAPVVSANGLDDNWPDTVGRVLPGIEVRIGDDQE-----------LQVSGPVVMR 465
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+ P T +A DGWL TGD I GR R ++GR K+ IV STGE
Sbjct: 466 GYWNRPEDTAKAFTADGWLRTGDQAAI----ENGRIR-------IKGRIKEIIVTSTGEK 514
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
V P ++E+A L L Q+ V+G+D+ I V + E + A+ + + DAS L
Sbjct: 515 VPPNDVEQAILVDPLFEQVFVVGEDRPFIACIAVVSQMEWEVLARSVGLNPDDASSLHHA 574
Query: 428 KTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 461
+ K T + P IH+V + ++++
Sbjct: 575 AAEREALARIEKQTRSFARYAVPRAIHLVRDSWSID 610
>gi|448658514|ref|ZP_21682914.1| long-chain fatty-acid-CoA ligase [Haloarcula californiae ATCC
33799]
gi|445761239|gb|EMA12488.1| long-chain fatty-acid-CoA ligase [Haloarcula californiae ATCC
33799]
Length = 660
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 50/344 (14%)
Query: 74 KFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ ++ LP HV+ER G +F+++ G + Y + L DDLQ +P +SVP VYE ++
Sbjct: 264 RSIAFLPLAHVFERLAGHFFMYASGAAVSYAESPDTLADDLQTVKPMTGLSVPRVYERIF 323
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
++ Q S +R+ ++ + + T N
Sbjct: 324 DNMRTQASESPLKKRIFDWSM-----------DVAREYARTENP---------------- 356
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
IL H LA++LVY ++ +G + + VSGGGSL + + +G+ + GYGL
Sbjct: 357 --GPILTAKHSLADRLVYSTVKERLGGNIEFMVSGGGSLSKTLCETFLGMGLTILEGYGL 414
Query: 251 TESSPVIAARRPTCNVLGSVGHPIN----HTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
TE+SPV++ P G++G P+ H + +VDA + + G G + V G V
Sbjct: 415 TETSPVLSVNPPEDIRPGTLGAPLPAVDVHIDTGVVDASEFDGV-TGDVGELLVDGPNVT 473
Query: 307 QGYFKNPSATKQALDE-DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
QGY+ P AT +A E DG W TGDI R L+ R K+ +VLS
Sbjct: 474 QGYWNAPDATARAFTEIDGTQWFRTGDI----------VERTDDDFLIYHDRLKELLVLS 523
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
TG+NV P +E+ + + Q++V+G DQ+ GAIIVP+ EE+
Sbjct: 524 TGKNVAPQPIEDQFATNDRVDQVMVVGDDQKFVGAIIVPNFEEL 567
>gi|160891396|ref|ZP_02072399.1| hypothetical protein BACUNI_03846 [Bacteroides uniformis ATCC 8492]
gi|156858803|gb|EDO52234.1| AMP-binding enzyme [Bacteroides uniformis ATCC 8492]
Length = 601
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 180/397 (45%), Gaps = 53/397 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D ++ LP HV+E+A Y RG+++ + ++++ ++ +P M SVP +E
Sbjct: 221 DQDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPQDIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I + R+ + I++ + R K P ++ L
Sbjct: 281 VYAGVQEKISQETGLRKAMMLDAIKVGRTH--------NIDYLRQGKTPPMMLHL----- 327
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
+ EK +Y ++ IGI + G ++P I F ++G+ + VG
Sbjct: 328 ----------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMVVG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ ++ +GSVG + E+KI E NE+L +RG +
Sbjct: 378 YGLTESTATVSCFLNEGYEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITT 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K P AT A+D DGW +TGD G++ H L L R KD S G+
Sbjct: 427 GYYKKPEATAAAIDRDGWFHTGDAGYLKDSH-----------LYLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P LE I QI VI +++ A+IVP V AK I +++ EL +
Sbjct: 476 ISPQALETKLAIDRYIDQIAVIADERKFVSALIVPVYGFVKDYAKEKGIAYSNMDELLQH 535
Query: 428 KTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F Q+ ++ EPF++
Sbjct: 536 PKIQALF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 571
>gi|255692993|ref|ZP_05416668.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides finegoldii
DSM 17565]
gi|260621305|gb|EEX44176.1| AMP-binding enzyme [Bacteroides finegoldii DSM 17565]
Length = 602
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 190/410 (46%), Gaps = 54/410 (13%)
Query: 59 QIRSLYD-IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQ 116
Q R+ D + + D ++ LP HV+E+A Y +G+++ + +++ ++ +
Sbjct: 208 QFRTHDDRLTTMSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIR 267
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M SVP +E +Y+G+Q++I ++ ++ + IR+ +I+ L + +
Sbjct: 268 PTLMCSVPRFWEKVYAGVQEKINETTGMKKALMLDAIRVG-------KIHNLDYLRKGKT 320
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHID 234
P ++ + + + EK +Y ++ IGI + G ++P I+
Sbjct: 321 PP-------------VMNQLKYKFY---EKTIYSLLKKTIGIENGNFFPTAGAAVPDEIN 364
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F ++G+ + VGYGLTES+ ++ P +GSVG + E+KI E NE+L
Sbjct: 365 EFVHSVGINMVVGYGLTESTATVSCTLPVGYDIGSVGVVLPGVEVKI--GEDNEIL---- 418
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+RG + +GY+K AT A+D DGW +TGD G+ G L L
Sbjct: 419 -----LRGKTITKGYYKKAEATAAAIDSDGWFHTGDAGYFK-----------NGQLFLTE 462
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KD S G+ + P LE + I QI +I ++ A+IVP V AK
Sbjct: 463 RIKDLFKTSNGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGYVKEYAKEK 522
Query: 415 SIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I + D SEL + I L+ R T + F QI ++ EPF++
Sbjct: 523 GIEYKDMSELLQHPKIVGLF-RARIETLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|448639450|ref|ZP_21676776.1| long-chain fatty-acid-CoA ligase [Haloarcula sinaiiensis ATCC
33800]
gi|445762729|gb|EMA13947.1| long-chain fatty-acid-CoA ligase [Haloarcula sinaiiensis ATCC
33800]
Length = 660
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 50/344 (14%)
Query: 74 KFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ ++ LP HV+ER G +F+++ G + Y + L DDLQ +P +SVP VYE ++
Sbjct: 264 RSIAFLPLAHVFERLAGHFFMYASGAAVSYAESPDTLADDLQTVKPMTGLSVPRVYERIF 323
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
++ Q S +R+ ++ + + T N
Sbjct: 324 DNMRTQASESPLKKRIFDWSM-----------DVAREYARTENP---------------- 356
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
IL H LA++LVY ++ +G + + VSGGGSL + + +G+ + GYGL
Sbjct: 357 --GPILTAKHSLADRLVYSTVKERLGGNIEFMVSGGGSLSKTLCETFLGMGLTILEGYGL 414
Query: 251 TESSPVIAARRPTCNVLGSVGHPIN----HTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
TE+SPV++ P G++G P+ H + +VDA + + G G + V G V
Sbjct: 415 TETSPVLSVNPPEDIRPGTLGAPLPDVDVHIDTGVVDASEFDGV-TGDVGELLVDGPNVT 473
Query: 307 QGYFKNPSATKQALDE-DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
QGY+ P AT +A E DG W TGDI R L+ R K+ +VLS
Sbjct: 474 QGYWNAPDATARAFTEIDGTQWFRTGDI----------VERTDDDFLIYHDRLKELLVLS 523
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
TG+NV P +E+ + + Q++V+G DQ+ GAIIVP+ EE+
Sbjct: 524 TGKNVAPQPIEDQFATNDRVDQVMVVGDDQKFVGAIIVPNFEEL 567
>gi|319949400|ref|ZP_08023465.1| long-chain fatty-acid--CoA ligase [Dietzia cinnamea P4]
gi|319436930|gb|EFV91985.1| long-chain fatty-acid--CoA ligase [Dietzia cinnamea P4]
Length = 602
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 163/347 (46%), Gaps = 55/347 (15%)
Query: 69 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD-------LQRYQPHYMI 121
A+ G K L LP HV RA Y ++ + A DD ++PH ++
Sbjct: 218 AQQGKKVLMFLPLAHVLARAVTYTVY------LGDATVGFWDDTSTILPRFADFRPHMIL 271
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
VP V+E + GI T +AA+ V R + + A G + ++PS L
Sbjct: 272 GVPRVFEKVRDGIA----TKAAAKGAVQRRIFERAEAVAIEDSRLRGNDGLDDARRPSLL 327
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAI 240
A AR L LVY+ I++A+G + +SGGG+LP I F+
Sbjct: 328 HA------ARYKALDL---------LVYRAIRAALGGRCEYAISGGGALPDRISHFFRGA 372
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
GV V GYGLTES+ P C +G+VG P+ T ++I D+ G V++
Sbjct: 373 GVPVYEGYGLTESTAAATVNGPGCQRIGTVGRPVAGTSVRIADS-----------GEVEL 421
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 360
G + Y+ N AT +A+ DGW TGD+G + P G L + GRAK+ I
Sbjct: 422 AGELIFDRYWNNEEATAEAV-RDGWFATGDLGALDPD----------GYLTITGRAKEII 470
Query: 361 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
V + G+NV P ++E+A L+ V+IG+ ++ A+I D++E+
Sbjct: 471 VTAGGKNVSPGQIEDAIRAHRLVGHAVLIGEARKFVSALITVDEDEL 517
>gi|238918664|ref|YP_002932178.1| AMP-binding enzyme [Edwardsiella ictaluri 93-146]
gi|238868232|gb|ACR67943.1| AMP-binding enzyme [Edwardsiella ictaluri 93-146]
Length = 603
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 201/436 (46%), Gaps = 53/436 (12%)
Query: 9 FHGYAYMSSFFSMFKVIFITLFFSRRDLP-LFSFVLIDLNTWMPIPKMTNFQIRS----L 63
HG+A+ S+ ++ + L LF+ + T P M +++ + L
Sbjct: 155 LHGFAHDGDSASLARLAQLAQRIDEASLDDLFTLIYTSGTTGEPKGVMLDYRNLAAQLYL 214
Query: 64 YDI-VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMI 121
+D + D L LP HV+ERA +++ G + +Y NL ++ +Q +P M
Sbjct: 215 HDARLNVSEQDVSLCFLPLSHVFERAWSFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMC 274
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
+VP YE ++S +Q ++ + RR + +A K+ + + R+Q
Sbjct: 275 AVPRFYEKIFSAVQARVAQAPWLRRQL------FHWALWCGKQRFLNERVGRSQ------ 322
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAI 240
R++ A +H LA++LV K+++ +G + + G L H+ LF++A+
Sbjct: 323 --------GRLMTA----MHRLADRLVLSKLRAILGGRVRFLPAAGAKLDDHVILFFQAL 370
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
G+ ++ GYG+TE+ ++ GS+G P+ E++I E+NE+ +V
Sbjct: 371 GLNIKYGYGMTETCATVSCWEEQGFRFGSIGRPLPGVEVRI--GESNEI---------QV 419
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 360
RG VM+GYF P T Q DGWL TGD G + G L + R KD +
Sbjct: 420 RGPIVMRGYFNKPQETAQTFTADGWLKTGDAGALDAQ----------GHLFITERLKDLM 469
Query: 361 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 420
S G+ + P +E R I+Q+ VI ++ A+IVP + + A+ +++ + D
Sbjct: 470 KTSNGKYIAPQLVEGTLARDRFIKQVAVIADARKFVSALIVPCFDSLEEYARSINLKYHD 529
Query: 421 ASELSKEKTISLLYGE 436
+L + I L+ +
Sbjct: 530 RLDLLRHSHIVALFEQ 545
>gi|258648793|ref|ZP_05736262.1| putative long-chain-fatty-acid--CoA ligase [Prevotella tannerae
ATCC 51259]
gi|260851128|gb|EEX70997.1| putative long-chain-fatty-acid--CoA ligase [Prevotella tannerae
ATCC 51259]
Length = 609
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 173/368 (47%), Gaps = 49/368 (13%)
Query: 67 VPAENGDKFLSMLPPWHVYERACGYFIFSRGI-ELMYTAVRNLKDDLQRYQPHYMISVPL 125
+P D FL+ LP H++ER Y FS G+ + + ++ +Q +P M SVP
Sbjct: 217 LPLSPNDVFLNFLPFTHIFERGWSYLGFSAGVCQAINERPADVLKSMQEIRPTCMSSVPR 276
Query: 126 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 185
++E +Y G+Q++I S +R + + + Y + +QK+P+ ++ +
Sbjct: 277 LWEKIYQGVQEKIAASPKMQRSLMKDALETGMRY---------WGDYASQKRPAPMMLKM 327
Query: 186 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVK 243
+ L ++ VYK ++ +G+ +A + G ++ ++ F A+G+
Sbjct: 328 KYK--------------LYDRTVYKLLRKTLGLDRANFFPTAGAAVSPEVEKFAHAVGLY 373
Query: 244 VQVGYGLTESSPVIAA-RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 302
+ VGYGLTES+ ++ + LGSVG + E+KI NE+L +RG
Sbjct: 374 MMVGYGLTESTATVSNDHKNERATLGSVGRILPGLELKI--GANNEIL---------LRG 422
Query: 303 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
+ GY+K SATK LD DGW +TGD G++ G L L R KD
Sbjct: 423 DTITPGYYKKESATKAVLDADGWFHTGDAGYMK-----------DGELFLTERIKDLFKT 471
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 422
S G+ + P ++E I Q VV+ +++ A+IVPD + + A + I A
Sbjct: 472 SNGKYIAPQQIESKMTIDRYIDQCVVVANERKFVSALIVPDFQALEAYANQNGIAFASHE 531
Query: 423 ELSKEKTI 430
EL ++ I
Sbjct: 532 ELCRKPEI 539
>gi|395221474|ref|ZP_10402957.1| long-chain-fatty-acid--CoA ligase [Pontibacter sp. BAB1700]
gi|394453258|gb|EJF08232.1| long-chain-fatty-acid--CoA ligase [Pontibacter sp. BAB1700]
Length = 585
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 158/340 (46%), Gaps = 53/340 (15%)
Query: 67 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPL 125
VP + LS LP H++ER Y G+ + Y ++ + D+L+ QPH +VP
Sbjct: 206 VPVNQHHRALSFLPLCHIFERMLLYLYMRIGVSIYYAESIEKVADNLKEVQPHVFTTVPR 265
Query: 126 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 185
+ E +Y I + + +R + + + Y TR K
Sbjct: 266 LLEKVYDKIVAKGMELTGVKRKLFFWALELGLQYD-----------TREDK--------- 305
Query: 186 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEAIGVKV 244
W + + + LA KL++ K + A+G + A VSGG +L + + + ++V
Sbjct: 306 GWWYNKQLE--------LANKLIFSKWREALGGNVIAIVSGGAALQPRLARVFWSANIRV 357
Query: 245 QVGYGLTESSPVIAARR--PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 302
GYGLTE+SPVIA R P NV+G+VG I+ EIKI AE E+L RG
Sbjct: 358 MEGYGLTETSPVIAVNRYEPENNVIGTVGMAIDGVEIKI--AEDGEIL---------TRG 406
Query: 303 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
VM+GY+K P T + +D + W +TGDIG + G L + R K+
Sbjct: 407 PHVMKGYYKKPDLTAEVIDAENWFHTGDIGELVE----------GKFLKITDRKKEMFKT 456
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
S G+ V P +E S +I Q +V+G Q+ A+IVP
Sbjct: 457 SGGKYVAPQPIENKLKESVVIEQAMVVGAGQKYAAALIVP 496
>gi|317478468|ref|ZP_07937628.1| AMP-binding enzyme [Bacteroides sp. 4_1_36]
gi|316905357|gb|EFV27151.1| AMP-binding enzyme [Bacteroides sp. 4_1_36]
Length = 601
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 179/397 (45%), Gaps = 53/397 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D ++ LP HV+E+A Y RG+++ + ++++ ++ +P M SVP +E
Sbjct: 221 DQDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPQDIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I + R+ + I++ + R K P ++ L
Sbjct: 281 VYAGVQEKISQETGLRKAMMLDAIKVGRTH--------NIDYLRQGKTPPMMLHL----- 327
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
+ EK +Y ++ IGI + G ++P I F ++G+ + VG
Sbjct: 328 ----------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMVVG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ ++ +GSVG + E+KI E NE+L +RG +
Sbjct: 378 YGLTESTATVSCFLNEGYEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITT 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K P AT A+D DGW +TGD G++ H L L R KD S G+
Sbjct: 427 GYYKKPEATAAAIDRDGWFHTGDAGYLKDSH-----------LYLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P LE I QI VI +++ A+IVP V AK I + + EL +
Sbjct: 476 ISPQALETKLAIDRYIDQIAVIADERKFVSALIVPVYGFVKDYAKEKGIAYNNMDELLQH 535
Query: 428 KTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F Q+ ++ EPF++
Sbjct: 536 SKIQALF-RARIDTLQQQFAHYEQVKRFTLLTEPFSM 571
>gi|448354784|ref|ZP_21543539.1| AMP-dependent synthetase and ligase [Natrialba hulunbeirensis JCM
10989]
gi|445637115|gb|ELY90271.1| AMP-dependent synthetase and ligase [Natrialba hulunbeirensis JCM
10989]
Length = 666
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 180/392 (45%), Gaps = 65/392 (16%)
Query: 65 DIVPAENGD-KFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMI 121
D VP + D + +S LP HV+ER G+F+ F+ G + Y + L++D QP+
Sbjct: 250 DDVPVIDSDCQAMSYLPLAHVFERTAGHFLLFASGACVAYAENPDTLQEDFSTVQPNTAT 309
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
SVP VYE +Y I++Q S +R+ A
Sbjct: 310 SVPRVYEKIYDAIREQASESPVKKRIFEWATD---------------------------- 341
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
+++ A IL LA+KLV+ ++ A+G + +SGGGSL + Y A+
Sbjct: 342 -VGVEYQRADSPGPILNAKRALADKLVFSTVREALGGEIEILISGGGSLSPELCRLYHAM 400
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA--ETNEVLPAGSKGIV 298
G+ + GYGLTE+SPV+A P +G++G + +I I ++ + + G G +
Sbjct: 401 GLPIFEGYGLTETSPVVAVNPPEEPKIGTIGPTVTDVDISIDESVVDQDAFDDPGMVGEL 460
Query: 299 KVRGSQVMQGYFKNPSATKQALDE----DG---------------WLNTGDIGWIAPHHS 339
RG V QGY+ PSAT +A + DG W TGD+ +
Sbjct: 461 LTRGPNVTQGYWNKPSATDRAFTDAAQPDGGAALEDPDADAAGGQWFRTGDVVHL----- 515
Query: 340 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 399
R G + R K IVLSTG+NV P +E+A S ++ Q +V+G ++ GA+
Sbjct: 516 -----RDDGYIEFRDRVKQLIVLSTGKNVAPGPIEDAFAASEVVEQCMVVGDGEKFIGAL 570
Query: 400 IVPDKEEVLMAAKRLSI-VHADASELSKEKTI 430
+VP+ E + A I + AD L +K +
Sbjct: 571 LVPNVEHIREWADEEGIDLPADLESLCDDKRV 602
>gi|384261959|ref|YP_005417145.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
gi|378403059|emb|CCG08175.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
Length = 607
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 174/384 (45%), Gaps = 57/384 (14%)
Query: 75 FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP H YE G +F G E+ + V L ++ +P M +VP +YE + +
Sbjct: 231 FLSFLPLSHSYEHTTGLFFPICLGAEVYFAEGVETLSANMLEARPTIMTAVPRLYEMMRA 290
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL-TRNQKQPSYLVALIDWLWAR 191
+ +QI + K Y+ L +R + P+ L W R
Sbjct: 291 RLLRQIEKEDGFKS----------------KLFYQAVELGSRRLQDPAGL----SWR-ER 329
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
I L + LV +K+ G KA VSGGG L + LF+ A+GV V GYGL
Sbjct: 330 ITDGAL-------DYLVRRKVSQRFGGRLKAMVSGGGPLSPEVGLFFRALGVPVLQGYGL 382
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++PV++ P +GSVG + E++I G G + VRG VM GY+
Sbjct: 383 TEAAPVVSCNLPCRVKIGSVGPALKDVEVRI-----------GLDGELLVRGPLVMDGYW 431
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
+P AT ALD +GWL+TGD+G I G + + R KD IV S G+N+ P
Sbjct: 432 NDPDATAHALDGEGWLHTGDVGEI----------DADGDIRITDRKKDIIVNSGGDNISP 481
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E I Q+VV G A+IVPD+E +L R S + +LS
Sbjct: 482 QRVEGILSLEPEIGQVVVFGDRMPHLVALIVPDREFLL----RWSRETGRSDDLSLAAND 537
Query: 431 SLLYGELRKWTSKCSFQIGPIHVV 454
+L L + + + ++ PI V
Sbjct: 538 PVLRLALARAVDRANARLSPIERV 561
>gi|381159083|ref|ZP_09868316.1| AMP-forming long-chain acyl-CoA synthetase [Thiorhodovibrio sp.
970]
gi|380880441|gb|EIC22532.1| AMP-forming long-chain acyl-CoA synthetase [Thiorhodovibrio sp.
970]
Length = 606
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 175/373 (46%), Gaps = 56/373 (15%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H+ ER Y++ G L Y +V L +DL+ +P +I+VP V+E +
Sbjct: 229 DVFLSFLPLSHMLERTASYYLPMMAGSTLAYARSVTQLAEDLKNVRPTVIIAVPRVFERV 288
Query: 131 YSGIQKQIFTSSAARRVV---ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
Y + +QI A R + AR ++F + +R + L
Sbjct: 289 YQRLHEQIRQRPAPTRWLFDLARHFGWVAFEHAQGRRRWHPLLL---------------- 332
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
LWP+ +LV K+ +G +A VSGG LP + + +G+ +
Sbjct: 333 ---------LWPV---LRRLVADKVLERLGGRIRAAVSGGAPLPPEVARLFLGLGLPLIQ 380
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE+SPV++ N +VG P+ +++I +E +E+L V G VM
Sbjct: 381 GYGLTETSPVVSVNPLEDNRPETVGIPLGGVQVRI--SELDELL---------VSGPGVM 429
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GY+ N +AT Q L +DGW TGD ++R G + + GR KD +VLS GE
Sbjct: 430 RGYWNNQAATAQVLGKDGWFRTGD-----------QARLVGRHIQITGRLKDILVLSNGE 478
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
V P ++E A L Q +V+G+ + A++V + + A+ + D + L+
Sbjct: 479 KVPPADMEMAIALDPLFEQAMVLGEGKPFLSALLVLNADLWPSLARDFQLDPQDPASLND 538
Query: 427 EKTISLLYGELRK 439
+ I + +RK
Sbjct: 539 QGLIKAMLARVRK 551
>gi|448688124|ref|ZP_21693997.1| long-chain fatty-acid-CoA ligase, partial [Haloarcula japonica DSM
6131]
gi|445779531|gb|EMA30453.1| long-chain fatty-acid-CoA ligase, partial [Haloarcula japonica DSM
6131]
Length = 442
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 175/362 (48%), Gaps = 52/362 (14%)
Query: 74 KFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ ++ LP HV+ER G +F+++ G + Y + L DDLQ +P +SVP VYE ++
Sbjct: 46 RSIAFLPLAHVFERLAGHFFMYASGAAVSYAESPDTLADDLQTVKPMTGLSVPRVYERIF 105
Query: 132 SGIQKQIFTSSAARRVVARAL-IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
++ Q S +R+ ++ + +A T P ++ L
Sbjct: 106 DNMRTQASESPLKKRIFDWSMDVARDYART---------------DDPGPVLGL------ 144
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
H LA++LVY ++ +G + + VSGGGSL + + +G+ + GYG
Sbjct: 145 ---------KHSLADRLVYSTVKERLGGNIEFMVSGGGSLSKALCETFLGMGLTILEGYG 195
Query: 250 LTESSPVIAARRPTCNVLGSVGHPIN----HTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
LTE+SPV+ P G++G P+ H + +VDA + + G G + V G V
Sbjct: 196 LTETSPVLTVNPPEDVRPGTLGAPLPDVDVHIDTGVVDASEFDDI-TGDVGELLVDGPNV 254
Query: 306 MQGYFKNPSATKQALDE-DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
GY+ +P AT++A E DG W TGDI R L+ R K+ +VL
Sbjct: 255 TAGYWNDPDATERAFTEIDGIQWFRTGDI----------VERTDDDFLIYHDRLKELLVL 304
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 422
STG+NV P +E+ S + Q++V+G DQ+ GAIIVP+ EE+ A + D
Sbjct: 305 STGKNVAPQPIEDQFATSDRVDQVMVVGDDQKFIGAIIVPNFEELRRWADSEGVALPDDP 364
Query: 423 EL 424
E+
Sbjct: 365 EV 366
>gi|404404087|ref|ZP_10995671.1| AMP-forming long-chain acyl-CoA synthetase [Alistipes sp. JC136]
Length = 635
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 192/408 (47%), Gaps = 62/408 (15%)
Query: 74 KFLSMLPPWHVYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISV 123
+ L +LP H + G++I G M T ++N+ +++ +PH+++SV
Sbjct: 218 RTLIILPLDHCFAHVVGFYIMIACGASVATVQIGATPMET-LKNIPQNIREVKPHFLLSV 276
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P + + GI+ I + +R ++AY +G+
Sbjct: 277 PALAKNFRKGIESSIRAKGKFTEGLFHLALRTAYAYNR-----DGYSKGSG--------- 322
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
W RI+ L P L + ++++K++ A G S K V GG L + FY AIG+
Sbjct: 323 -----W-RIV---LKPFVALFDAVLFRKVREAFGGSLKFFVGGGALLDAELQRFYYAIGI 373
Query: 243 KVQVGYGLTESSPVIAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
+ GYGL+E++PVI+ P + GS G + ++KI+D E EV P G KG + +
Sbjct: 374 PMFQGYGLSEATPVISTNSPNYHWHRFGSSGKILIPLDLKILDEEGREV-PRGQKGEIVI 432
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 360
RG VM GY+KNP AT + DGWL+TGD+G+++ L + GR K +
Sbjct: 433 RGENVMAGYWKNPDATADTV-RDGWLHTGDMGYVSEDD----------FLYVLGRFKSLL 481
Query: 361 VLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
+ S GE P +EEA + +S I QI++ GAI+VP++E +L + I
Sbjct: 482 IASDGEKYSPEGMEEAIVDKSPYIDQIIIHNNQDPFTGAIVVPNREALLRELEARKIPEG 541
Query: 420 DASELSKEKTISLLYGELRKWTSKCSFQ--------IGPIHVVDEPFT 459
+ + ++ E +L E+ ++ + F + +VDE FT
Sbjct: 542 EHAAVAAE----ILGAEIDRYRAGGVFAGEFPERWLPAGLAIVDEAFT 585
>gi|423220287|ref|ZP_17206782.1| hypothetical protein HMPREF1061_03555 [Bacteroides caccae
CL03T12C61]
gi|392623364|gb|EIY17467.1| hypothetical protein HMPREF1061_03555 [Bacteroides caccae
CL03T12C61]
Length = 601
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 186/397 (46%), Gaps = 55/397 (13%)
Query: 73 DKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP +E
Sbjct: 221 DKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + I++ RI+ L R + P
Sbjct: 281 VYAGVQEKINETTGLKKALMLDAIKVG-------RIHNLDYLRRGKTPP----------- 322
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
++ + + + EK +Y ++ IGI + G ++P I+ F ++G+ + VG
Sbjct: 323 --VMNQLKYKFY---EKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ ++ P +GSVG + E+KI E NE+L +RG + +
Sbjct: 378 YGLTESTATVSCTLPVGYDIGSVGVVLPGVEVKI--GEDNEIL---------LRGKTITK 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K AT A+D DGW +TGD G+ G L L R KD S G+
Sbjct: 427 GYYKKAEATAAAIDPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P LE + I QI +I ++ A+IVP V AK I + D +EL +
Sbjct: 476 IAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMAELLQH 535
Query: 428 KTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F QI ++ EPF++
Sbjct: 536 PKIVGLF-RARIETLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|407783917|ref|ZP_11131108.1| AMP-dependent synthetase and ligase [Oceanibaculum indicum P24]
gi|407199170|gb|EKE69192.1| AMP-dependent synthetase and ligase [Oceanibaculum indicum P24]
Length = 602
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 188/397 (47%), Gaps = 57/397 (14%)
Query: 72 GDK-FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 128
GD+ FLS LP H YE CG +F S G ++ Y L +LQ +P M +VP +YE
Sbjct: 224 GDEVFLSFLPLSHSYEHTCGLFFPISIGAQIYYAEGADTLAANLQEAKPTIMTAVPRLYE 283
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
L+ I + + +R + + + KRI + L+ +K
Sbjct: 284 VLHGRILAGVERAGGKKRDLFMKALEL-----GRKRIEQPGSLSLGEKA----------- 327
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
+LL + LV +K++ +G KA +SGG L + +F+ A+G+++ G
Sbjct: 328 -----------FNLLLDLLVRRKVRQRMGGRLKAFISGGAPLNYEVGMFFLALGIRLCQG 376
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG TE++PV++ RP + +VG P+ E+++ A E+L VRG +M
Sbjct: 377 YGQTEAAPVVSCNRPRRIRIETVGPPLKGVEVRL--APDGEIL---------VRGELLMD 425
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+ +P AT++AL DGWL+TGDIG I P G + + R +D IV+S G+N
Sbjct: 426 GYWDDPEATEKAL-IDGWLHTGDIGEIDPD----------GYIRITDRKRDIIVISGGDN 474
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E I Q +V G + +IVP ++ V AK + + +EL+ +
Sbjct: 475 ISPQRVEGFVTLQPEINQAMVYGDKRPYLVGLIVPAQDFVESYAKGKGVA-PNLAELAGD 533
Query: 428 KTISLLYGELRKWTSKCSFQIGPIH---VVDEPFTVN 461
K GE+ ++ + + + EPFT +
Sbjct: 534 KDFRAAIGEVLDRVNRDLSSLEKVRRFVIATEPFTTD 570
>gi|260913053|ref|ZP_05919535.1| long-chain-fatty-acid--CoA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632640|gb|EEX50809.1| long-chain-fatty-acid--CoA ligase [Pasteurella dagmatis ATCC 43325]
Length = 606
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 173/373 (46%), Gaps = 51/373 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 131
D LS LP H++ERA ++ RG Y N +++ L +P M +VP YE +Y
Sbjct: 223 DVSLSFLPFSHIFERAWVAYVLHRGAVNCYLEDSNKVREALSELRPTLMCAVPRFYEKIY 282
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ + ++ +S RR + I I + F L R Q +P
Sbjct: 283 TAVWDKVQKASFIRRTIFNWAISIG---------QKRFELAR-QTKP------------- 319
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
I IL + LA+KLV K++ +G K GG L I LF+ +IG+ +++GYG+
Sbjct: 320 -IPFILRKKYALADKLVLSKLRKLLGGRIKMMPCGGAKLEPTIGLFFHSIGINIKLGYGM 378
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ + S+G + TE+KI E NE+L VRG VM+GY+
Sbjct: 379 TETTATVSCWKDNSFDPNSIGTLMPGTEVKI--GENNEIL---------VRGGMVMRGYY 427
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P TK+ EDG+L TGD G G L + R K+ + S G+ + P
Sbjct: 428 KKPQETKETFTEDGFLKTGDAGEFD----------ANGNLYITDRIKELMKTSNGKYIAP 477
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + I QI VI ++ A+IVP + AK+L+I + D EL K I
Sbjct: 478 QYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFTSLEEHAKQLNIKYQDRMELIKHSEI 537
Query: 431 SLLY----GELRK 439
++ EL+K
Sbjct: 538 IKMFEQRINELQK 550
>gi|449145821|ref|ZP_21776618.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus CAIM 602]
gi|449078529|gb|EMB49466.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus CAIM 602]
Length = 601
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 181/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V +++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS+L
Sbjct: 280 SAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LTQSHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ I+ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATISCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLEKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|153809226|ref|ZP_01961894.1| hypothetical protein BACCAC_03537 [Bacteroides caccae ATCC 43185]
gi|149128202|gb|EDM19422.1| AMP-binding enzyme [Bacteroides caccae ATCC 43185]
Length = 601
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 186/397 (46%), Gaps = 55/397 (13%)
Query: 73 DKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP +E
Sbjct: 221 DKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + I++ RI+ L R + P
Sbjct: 281 VYAGVQEKINETTGLKKALMLDAIKVG-------RIHNLDYLRRGKTPP----------- 322
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
++ + + + EK +Y ++ IGI + G ++P I+ F ++G+ + VG
Sbjct: 323 --VMNQLKYKFY---EKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ ++ P +GSVG + E+KI E NE+L +RG + +
Sbjct: 378 YGLTESTATVSCTLPVGYDIGSVGVVLPGVEVKI--GEDNEIL---------LRGKTITK 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K AT A+D DGW +TGD G+ G L L R KD S G+
Sbjct: 427 GYYKKTEATAAAIDPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P LE + I QI +I ++ A+IVP V AK I + D +EL +
Sbjct: 476 IAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMAELLQH 535
Query: 428 KTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F QI ++ EPF++
Sbjct: 536 PKIVGLF-RARIETLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|423301229|ref|ZP_17279253.1| hypothetical protein HMPREF1057_02394 [Bacteroides finegoldii
CL09T03C10]
gi|408471830|gb|EKJ90359.1| hypothetical protein HMPREF1057_02394 [Bacteroides finegoldii
CL09T03C10]
Length = 602
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 186/397 (46%), Gaps = 55/397 (13%)
Query: 73 DKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP +E
Sbjct: 221 DKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + IR+ +I+ L + + P
Sbjct: 281 VYAGVQEKINETTGMKKALMLDAIRVG-------KIHNLDYLRKGKTPP----------- 322
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
++ + + + EK +Y ++ IGI + G ++P I+ F ++G+ + VG
Sbjct: 323 --VMNQLKYKFY---EKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ ++ P +GSVG + E+KI E NE+L +RG + +
Sbjct: 378 YGLTESTATVSCTLPVGYDIGSVGVVLPGVEVKI--GEDNEIL---------LRGKTITK 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K AT A+D DGW +TGD G+ G L L R KD S G+
Sbjct: 427 GYYKKAEATAAAIDPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P LE + I QI +I ++ A+IVP V AK I + D SEL +
Sbjct: 476 IAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMSELLQH 535
Query: 428 KTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F QI ++ EPF++
Sbjct: 536 PKIVGLF-RARIETLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|258622365|ref|ZP_05717390.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM573]
gi|424807687|ref|ZP_18233095.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio mimicus SX-4]
gi|258585381|gb|EEW10105.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM573]
gi|342325629|gb|EGU21409.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio mimicus SX-4]
Length = 601
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 181/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V +++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS+L
Sbjct: 280 SAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LTQSHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ I+ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATISCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLEKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|330997841|ref|ZP_08321676.1| AMP-binding enzyme [Paraprevotella xylaniphila YIT 11841]
gi|329569729|gb|EGG51494.1| AMP-binding enzyme [Paraprevotella xylaniphila YIT 11841]
Length = 618
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 186/398 (46%), Gaps = 58/398 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLY 131
D L+ LP HV+ERA Y S G +L ++ LQ P M +VP +E +Y
Sbjct: 223 DVVLNFLPFTHVFERAWSYLCLSEGAQLAVNLRPADVLQSLQEVHPTCMCAVPRFWEKVY 282
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+G+Q++I S+ +R + +++ AY + + LI + R
Sbjct: 283 AGVQEKIRRSNPVQRKLLHEALQVGKAYNVHYK----------------MRGLIPPVSLR 326
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYG 249
+ + EK V ++ +G A + G ++P ++ F + G+ + GYG
Sbjct: 327 L-------RYTFFEKTVIALLKRTLGFENANFFPTAGAAIPPVVEEFVHSAGINMVAGYG 379
Query: 250 LTESSPVIAA-RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
LTES+ ++ R+ +GSVG I ++K D NE+L +RG+ + +G
Sbjct: 380 LTESTATVSCDRKGQTKTIGSVGRIIGGLQLKFGD--DNEIL---------LRGTSITKG 428
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y++ AT+ A+DEDGW +TGD G++ G L L R KD S G+ +
Sbjct: 429 YYRKDEATRAAIDEDGWFHTGDAGYLK-----------NGELFLTDRIKDLFKTSNGKYI 477
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QIVVI ++ A+IVP+ + A+R I +AD ++L +
Sbjct: 478 APQMIESKLVVDRYIDQIVVIADQRKFVSALIVPEYNLLKEFAERHHIRYADTADLCRNA 537
Query: 429 TIS--LLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I+ LL+ R T + F Q+ I ++ EPF++
Sbjct: 538 DINKMLLF---RINTLQQEFAHYEQVKRITLLPEPFSM 572
>gi|448732146|ref|ZP_21714428.1| acyl-CoA synthetase [Halococcus salifodinae DSM 8989]
gi|445805058|gb|EMA55285.1| acyl-CoA synthetase [Halococcus salifodinae DSM 8989]
Length = 645
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 171/364 (46%), Gaps = 47/364 (12%)
Query: 67 VPAENGD-KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISV 123
PA + D + +S LP HV+ER G+F+ F+ G + Y + L++D QP SV
Sbjct: 251 TPAIDTDSEAISFLPLAHVFERLSGHFLMFAAGATVGYAESPDTLQEDFGLLQPTTGASV 310
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P VYE LY I+ Q S+ R+ A + I Y G R
Sbjct: 311 PRVYEKLYDAIRDQAAESAVRERIFEWA-VEIGRTYQTADSPGIGLRAKR---------- 359
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
+A++LV+ +++ A+G + + +SGGGSL + + +GV
Sbjct: 360 ------------------AVADRLVFGQVREALGGNVEFLISGGGSLSPDLAELFHGMGV 401
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK--- 299
+ GYGLTE++PV++ P +G++G P++ E++I + L A S G V
Sbjct: 402 PILEGYGLTETAPVVSVNPPEEPEVGTIGPPVHDEEVRIDSTVVADDLAAKSGGEVGELL 461
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
VRG V GY+ P T+ A E GW TGD+ P G + R+K
Sbjct: 462 VRGPNVTDGYWNRPEETEDAFSE-GWFRTGDVVEQQPD----------GYITFRERSKQL 510
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
+VLSTG+NV P +E++ + S + Q + +G ++ GA+IVP++ V A I
Sbjct: 511 LVLSTGKNVAPGPIEDSFAQHSAVEQCMAVGDGEKFVGALIVPNEAHVREWAADEGIDLP 570
Query: 420 DASE 423
D S+
Sbjct: 571 DDSQ 574
>gi|167764189|ref|ZP_02436316.1| hypothetical protein BACSTE_02573 [Bacteroides stercoris ATCC
43183]
gi|167698305|gb|EDS14884.1| AMP-binding enzyme [Bacteroides stercoris ATCC 43183]
Length = 601
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 187/410 (45%), Gaps = 61/410 (14%)
Query: 63 LYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHY 119
++DI DK +SM LP HV+E+A YF RG+++ +++ ++ +P
Sbjct: 211 IHDIRLTAMTDKDVSMNFLPLTHVFEKAWTYFCLHRGVQVCVNLRPADIQTTIKEIRPTL 270
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
M SVP +E +Y+G+Q++I S R+ + +++ +
Sbjct: 271 MCSVPRFWEKVYAGVQEKIAQESGLRKAMMLDALKVGKMHN------------------- 311
Query: 180 YLVALIDWLWARIICAILWPLHL---LAEKLVYKKIQSAIGISKAGV--SGGGSLPMHID 234
ID+L A ++ LHL EK +Y ++ IGI + G ++ I
Sbjct: 312 -----IDYLRAGKTPPLM--LHLKYKFYEKTIYALLKKTIGIENGNFFPTAGAAVSDEIC 364
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 365 EFVHSVGINMVVGYGLTESTATVSCFLDKGYEIGSVGTVMPDLEVKI--GENNEIL---- 418
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+RG + GY+K P AT A+D+DGW +TGD G++ +H L L
Sbjct: 419 -----LRGKTITTGYYKKPEATAAAIDKDGWFHTGDAGYLKGNH-----------LYLTE 462
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KD S G+ + P LE I QI VI ++ A+IVP V AK
Sbjct: 463 RIKDLFKTSNGKYISPQALETKLSIDRYIDQIAVIADQRKFVSALIVPVYGLVKNYAKEK 522
Query: 415 SIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
+ + D ++L + + L+ R T + F Q+ ++ EPF++
Sbjct: 523 GLEYKDMADLLQHPKVQALF-RARIDTLQQQFAHYEQVKRFTLLSEPFSM 571
>gi|424034170|ref|ZP_17773577.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-01]
gi|408873321|gb|EKM12519.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-01]
Length = 602
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 181/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + A C N+K PS +
Sbjct: 280 SAIHEKVSRAPFHRKIMFTWAVNMGAKMAA--------CHQENRK-PSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|423281106|ref|ZP_17260017.1| hypothetical protein HMPREF1203_04234 [Bacteroides fragilis HMW
610]
gi|404583270|gb|EKA87951.1| hypothetical protein HMPREF1203_04234 [Bacteroides fragilis HMW
610]
Length = 601
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 188/407 (46%), Gaps = 53/407 (13%)
Query: 63 LYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHY 119
++DI + DK +SM LP HV+E+A Y +G+++ + +++ ++ +P
Sbjct: 211 IHDIRLVDMTDKDVSMNFLPLTHVFEKAWTYLCVHKGVQVCINLRPADIQTTIKEIRPTL 270
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
M SVP +E +Y+G+Q++I ++ ++++ I++ RI+ R K P
Sbjct: 271 MCSVPRFWEKVYAGVQEKIAETTGIKKMLMLDAIKVG-------RIH-NLEYLRVGKTPP 322
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFY 237
++ L + EK +Y ++ IGI + G ++P I F
Sbjct: 323 KMIQL---------------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICEFV 367
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
++G+ + VGYGLTES+ ++ T +GSVG + E+KI E NE+L
Sbjct: 368 HSVGIDMLVGYGLTESTATVSCTSKTGYDIGSVGQVMPEVEVKI--GEDNEIL------- 418
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
+RG + +GY+K AT A+DE+GW +TGD G+ G L L R K
Sbjct: 419 --LRGKTITKGYYKKAEATAAAIDEEGWFHTGDAGYFK-----------NGQLYLTERIK 465
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
D S G+ + P LE + I QI +I ++ A+IVP V AK I
Sbjct: 466 DLFKTSNGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKQYAKEKGIE 525
Query: 418 HAD-ASELSKEKTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTVN 461
+ D A L K I+L + + + QI ++ EPF++
Sbjct: 526 YKDMAGLLEHPKIIALFRARIDTLQQQFAHYEQIKRFTLLPEPFSME 572
>gi|345865361|ref|ZP_08817547.1| long-chain-fatty-acid--CoA ligase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345123530|gb|EGW53424.1| long-chain-fatty-acid--CoA ligase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 593
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 183/395 (46%), Gaps = 58/395 (14%)
Query: 71 NGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 128
+ D FLS LP H ER GY++ G + Y ++ L +DLQ+ +P +I+VP ++E
Sbjct: 220 SNDLFLSFLPLSHALERTVGYYLPIVAGSRVAYARSIPELAEDLQQLRPTVLIAVPRIFE 279
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+ + + +R + + ++ + +++ R P L
Sbjct: 280 RIYNKLMSALDEGPTLKRKLFESAVQTGWQNFNYQQ-------GRAHWSPRLLG------ 326
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
WP L E+LV KK+Q +G + VSGG L I + +GV + G
Sbjct: 327 ---------WP---LLERLVAKKLQQRLGGRLRIAVSGGAPLTAEIARTFVGLGVPILQG 374
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTE+SP+IA N+ SVG + E +I G ++VR VM
Sbjct: 375 YGLTETSPIIAENTHADNIPDSVGLILPGIEARI-----------GENDELQVRSPTVML 423
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+ NP AT + +D DGWL+TGD I +H L + GR K+ IVL+ GE
Sbjct: 424 GYWNNPQATAETIDPDGWLHTGDKVKIEQNH-----------LFITGRIKEIIVLANGEK 472
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
V P ++E L Q++VIG+ + A++V + ++ + + D + L+K
Sbjct: 473 VPPADMEMCIALDPLFEQVLVIGEGRPYLSAMVVLNPKQCEHEGIDIENLSVDGA-LNKR 531
Query: 428 --KTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 460
+ IS G + QI + V+DEP+TV
Sbjct: 532 LLERISSHLGSFPGYA-----QIRRLAVIDEPWTV 561
>gi|448459771|ref|ZP_21596821.1| AMP-dependent synthetase and ligase [Halorubrum lipolyticum DSM
21995]
gi|445808223|gb|EMA58297.1| AMP-dependent synthetase and ligase [Halorubrum lipolyticum DSM
21995]
Length = 688
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 165/361 (45%), Gaps = 69/361 (19%)
Query: 76 LSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G Y +F+ G + Y + L++D +P SVP VYE LY
Sbjct: 280 LSFLPLAHVFERLAGHYMMFAAGATVGYAESPDTLREDFGLVRPTTTTSVPRVYEKLYDA 339
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q SS R+ +A K +E A
Sbjct: 340 IREQASESSVKERI-------FEWAVDVGKAHHE----------------------ADDP 370
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
A+L +A++LV+ ++ AIG + +SGGGSL + Y A+ + + GYGLTE
Sbjct: 371 GAVLDAKRAVADRLVFSSVREAIGGNVDFFISGGGSLSAELCALYHAMDLPILEGYGLTE 430
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKI---VDAETNEVLPAGSKGIVKVRGSQVMQGY 309
+SPVI P +G++G P+ TE+ I V E LP G G + VRG QV GY
Sbjct: 431 TSPVICVNPPEEPKVGTIGPPVVDTEVAIDGGVVGEAAAELP-GDVGELLVRGPQVTDGY 489
Query: 310 FKNPSATKQAL------------------DEDG-----WLNTGDIGWIAPHHSRGRSRRC 346
+ P AT +A D DG W +TGDI + P
Sbjct: 490 WNRPDATAEAFTEPDRLPDDAVVAGTPPADRDGDPAEPWFHTGDIVQLRPD--------- 540
Query: 347 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 406
G + RAK +VLSTG+NV P +E+ + + Q VV+G ++ A+IVP+ E+
Sbjct: 541 -GYVAFRERAKQLLVLSTGKNVAPGPIEDRFAANEFVEQCVVLGDGRKFVSALIVPNFEK 599
Query: 407 V 407
V
Sbjct: 600 V 600
>gi|448298700|ref|ZP_21488728.1| AMP-dependent synthetase and ligase [Natronorubrum tibetense GA33]
gi|445591370|gb|ELY45576.1| AMP-dependent synthetase and ligase [Natronorubrum tibetense GA33]
Length = 563
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 173/356 (48%), Gaps = 48/356 (13%)
Query: 74 KFLSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ +S LP HV+ER CG+F +F+ G + Y + L +DL P M SVP VYE LY
Sbjct: 164 QVVSFLPLAHVFERTCGHFMLFAAGGCVAYAESPETLTEDLPAVAPDSMTSVPRVYEKLY 223
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
GI+++ A V A + ++ Y A +PS D L
Sbjct: 224 DGIRERAAQDEAKADVFEWA-VDVARRYQA-------------ADEPS------DELEGE 263
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
+ A ++LV+ +I+ ++G + ++ +SGGGSL + + +G+ + GYG+
Sbjct: 264 LESA---------DQLVFAEIRESMGGNIESLISGGGSLSPELCRLFHGMGLPIYEGYGM 314
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK--GIVKVRGSQVMQG 308
TE+SPV+A P +G++G ++ E KI + ++ G + +RG V G
Sbjct: 315 TEASPVVATNPPADTRIGTIGPALSGLETKIDSSVVSDDDFDDEGDIGELLIRGPNVTDG 374
Query: 309 YFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
Y+ P AT+ A DEDG W TGDI R G L RAK +VLST
Sbjct: 375 YWNKPDATEGAFTKDEDGNRWFRTGDI----------VHERPDGYLEFRERAKQLVVLST 424
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 420
G+NV P +E+A ++ Q +V+G ++ GA++VP+ + + A+ + D
Sbjct: 425 GKNVAPAPIEDAFASVDVVEQCLVVGDGEKFVGALLVPNVDALRSRAESEDVTLPD 480
>gi|34499506|ref|NP_903721.1| long chain fatty-acid CoA ligase [Chromobacterium violaceum ATCC
12472]
gi|34105356|gb|AAQ61711.1| probable long chain fatty-acid CoA ligase [Chromobacterium
violaceum ATCC 12472]
Length = 587
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 185/400 (46%), Gaps = 59/400 (14%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
+ LS LP H++ERA ++ G + + +V L L +PH SVP V E ++
Sbjct: 212 RALSFLPLSHIFERAGVFYYLYSGTGIYFASVECLSSALADVKPHTFSSVPRVLEKVHEK 271
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK-QPSYLVALIDWLWARI 192
+ + + A+R RIY+ + L R + P+ + +D +
Sbjct: 272 LVGKARDLTGAKR-----------------RIYQ-WALARAENFDPNRRRSPLDAI---- 309
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYGLT 251
H LA+KLVY K ++A+G ++ G +L + + A G+ V GYG+T
Sbjct: 310 -------QHALADKLVYSKWRAAMGGELISINVGSAALQPRLARMFWAAGIAVAEGYGMT 362
Query: 252 ESSPVIAARRPTCN--VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
ESSPVI+A T +GSVG P+ E+++ D G + VRG VM GY
Sbjct: 363 ESSPVISANPFTARGVRIGSVGLPLPGVEVRLAD-----------DGEILVRGDNVMSGY 411
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+K P T AL DGWL+TGDIG + G L + R K+ S G+ +
Sbjct: 412 YKEPEQTSDAL-RDGWLHTGDIGVLE-----------DGYLRITDRKKEMFKTSNGKYIA 459
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-K 428
P LE S+ I QI+V+G Q+ A+IVP E++ I + E+S+ K
Sbjct: 460 PQALENKLKESAFIDQIMVVGDGQKYAAALIVPLFEKLKEWCAEHGISYTTDCEMSRHPK 519
Query: 429 TISLLYGELRKWTSKCSF--QIGPIHVVDEPFTVNFLCLA 466
+ L+ E++++ I ++D+P+ V+ LA
Sbjct: 520 VVELIDREVKRFNRYFGSWEHIKKFSLLDKPWCVDAGELA 559
>gi|345877498|ref|ZP_08829243.1| DNA polymerase III subunit delta' [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225466|gb|EGV51824.1| DNA polymerase III subunit delta' [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 619
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 183/395 (46%), Gaps = 58/395 (14%)
Query: 71 NGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 128
+ D FLS LP H ER GY++ G + Y ++ L +DLQ+ +P +I+VP ++E
Sbjct: 246 SNDLFLSFLPLSHALERTVGYYLPIVAGSRVAYARSIPELAEDLQQLRPTVLIAVPRIFE 305
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+ + + +R + + ++ + +++ R P L
Sbjct: 306 RIYNKLMSALDEGPTLKRKLFESAVQTGWQNFNYQQ-------GRAHWSPRLLG------ 352
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
WP L E+LV KK+Q +G + VSGG L I + +GV + G
Sbjct: 353 ---------WP---LLERLVAKKLQQRLGGRLRIAVSGGAPLTAEIARTFVGLGVPILQG 400
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTE+SP+IA N+ SVG + E +I G ++VR VM
Sbjct: 401 YGLTETSPIIAENTHADNIPDSVGLILPGIEARI-----------GENDELQVRSPTVML 449
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+ NP AT + +D DGWL+TGD I +H L + GR K+ IVL+ GE
Sbjct: 450 GYWNNPQATAETIDPDGWLHTGDKVKIEQNH-----------LFITGRIKEIIVLANGEK 498
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
V P ++E L Q++VIG+ + A++V + ++ + + D + L+K
Sbjct: 499 VPPADMEMCIALDPLFEQVLVIGEGRPYLSAMVVLNPKQCEHEGIDIENLSVDGA-LNKR 557
Query: 428 --KTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 460
+ IS G + QI + V+DEP+TV
Sbjct: 558 LLERISSHLGSFPGYA-----QIRRLAVIDEPWTV 587
>gi|262170570|ref|ZP_06038248.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus MB-451]
gi|261891646|gb|EEY37632.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus MB-451]
Length = 601
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 181/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V +++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS+L
Sbjct: 280 SAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQNHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ I+ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATISCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLEKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|339629861|ref|YP_004721504.1| AMP-dependent synthetase and ligase [Sulfobacillus acidophilus TPY]
gi|339287650|gb|AEJ41761.1| AMP-dependent synthetase and ligase [Sulfobacillus acidophilus TPY]
Length = 593
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 166/351 (47%), Gaps = 51/351 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D LS LP H+ ER S+G+ + Y + + +L+ +P M++VP ++E LY
Sbjct: 208 DVALSFLPLSHILERMVHLLFLSQGVTIAYAESPERIPANLREIRPTVMVAVPRIFEKLY 267
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ I Q+ + +R + IR R YE F W W
Sbjct: 268 AAILDQMTRAGGVKRRLFDWAIRQGI------RRYERF-----------------WQWGG 304
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
W A++LVY++I+ A+G + +SGG +L I F+ A+G+ V GYGL
Sbjct: 305 SRPVWGW-ADRWADRLVYRRIRQAVGGRLRFVISGGAALNPVIGQFFYAVGIPVIEGYGL 363
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++PV+A P G+VG P+ +++ A E+L RG + GY+
Sbjct: 364 TETAPVLAVNWPDRPRYGTVGRPLPEVTLQL--APDGEIL---------ARGPNITPGYW 412
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P T++A +DGW +TGD+G P G L + R K IVLSTG+NV P
Sbjct: 413 NRPEETQEAF-QDGWFHTGDLGEWTPD----------GFLRVTDRKKYIIVLSTGKNVAP 461
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 421
+E+ L S I Q VV+G Q+ A++ + E+V A+ + H DA
Sbjct: 462 QAVEQKLLLSPWIEQAVVLGNRQKYVAALLYLNPEKVQEWAR---LHHRDA 509
>gi|255531463|ref|YP_003091835.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
gi|255344447|gb|ACU03773.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
Length = 637
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 169/349 (48%), Gaps = 49/349 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIF-SRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
+ FLS LP HV+ER Y + ++G + Y ++ L ++ +P M VP + E +
Sbjct: 233 ETFLSFLPLSHVFERTATYHVCCAQGCRIAYAQSLELLAKNMAEIKPTVMSCVPRLLEKI 292
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
+ K + + +A + ++ + +++I E K P
Sbjct: 293 HD---KALKSGTAGGGLKSKIFLWALEVGQDYRKIKEA------GKTPG----------- 332
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
++ LAEKLV+ KI+ G K +SGG +LP ++ F+ +G+K+ G+G
Sbjct: 333 ----MVMRAKKTLAEKLVFSKIKEKTGGRLKFMISGGAALPKNVGEFFGNLGIKILEGFG 388
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP-----------AGSKGIV 298
LTE+SPV+A V G+VG I E+ I D ET +++ ++G +
Sbjct: 389 LTETSPVMAVTEYHRQVYGTVGRIIPGIEVGIQDIETRQMISIQTHDTFMEDFECAEGEI 448
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
VRG VMQGYF P+ T + +D+D W +TGDIG R G L + R K+
Sbjct: 449 IVRGHCVMQGYFNKPAETAEVIDKDNWFHTGDIG-----------RFYRGNLQITDRLKN 497
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
IV + G+NV P +E L+S I QI +IG + AI++P+KE +
Sbjct: 498 MIVNAYGKNVYPTPVENIYLKSLKIDQIFLIGDKREYLTAIVIPNKENL 546
>gi|420257198|ref|ZP_14759964.1| AMP-binding protein [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404515343|gb|EKA29112.1| AMP-binding protein [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 599
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 176/368 (47%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP HV+ERA +++ G + +Y + N ++ +Q +P M +VP YE
Sbjct: 220 SDDTSLSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVRAAMQTVKPTVMCAVPRFYEK 279
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S I ++ + RR++ R +A +R ++ Q S WL
Sbjct: 280 VFSAINDKVALAKWHRRMLFR------WAVGCGERKFQNL----QSGQTS------SWLS 323
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
+ ++ LA++LV K++ +G + + G L +I LF++AIG+ ++ GY
Sbjct: 324 EQ--------MYKLADRLVLSKLRGVLGGKVRFLPAAGARLDDNIILFFQAIGINIKYGY 375
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE+ ++ T GS+G P+ E+++ G++ ++VRG VM+G
Sbjct: 376 GMTETCATVSCWEETDFRFGSIGKPLPGIEVRL-----------GAENEIQVRGPIVMRG 424
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
YF P T ++ EDGWL TGD G + P G L + R KD + S G+ +
Sbjct: 425 YFNKPQETAESFTEDGWLKTGDAGALDPQ----------GNLFITERLKDLMKTSGGKYI 474
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP E + A +++ + D EL +
Sbjct: 475 APQMIEGTLGQDRFIEQIAIIADTRKFVSALIVPCFESLEEYAHSINLKYHDRLELLRHS 534
Query: 429 TISLLYGE 436
I L+ +
Sbjct: 535 HIVSLFEQ 542
>gi|379007028|ref|YP_005256479.1| long-chain-fatty-acid--CoA ligase [Sulfobacillus acidophilus DSM
10332]
gi|361053290|gb|AEW04807.1| Long-chain-fatty-acid--CoA ligase [Sulfobacillus acidophilus DSM
10332]
Length = 589
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 166/351 (47%), Gaps = 51/351 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D LS LP H+ ER S+G+ + Y + + +L+ +P M++VP ++E LY
Sbjct: 204 DVALSFLPLSHILERMVHLLFLSQGVTIAYAESPERIPANLREIRPTVMVAVPRIFEKLY 263
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ I Q+ + +R + IR R YE F W W
Sbjct: 264 AAILDQMTRAGGVKRRLFDWAIRQGI------RRYERF-----------------WQWGG 300
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
W A++LVY++I+ A+G + +SGG +L I F+ A+G+ V GYGL
Sbjct: 301 SRPVWGW-ADRWADRLVYRRIRQAVGGRLRFVISGGAALNPVIGQFFYAVGIPVIEGYGL 359
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++PV+A P G+VG P+ +++ A E+L RG + GY+
Sbjct: 360 TETAPVLAVNWPDRPRYGTVGRPLPEVTLQL--APDGEIL---------ARGPNITPGYW 408
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P T++A +DGW +TGD+G P G L + R K IVLSTG+NV P
Sbjct: 409 NRPEETQEAF-QDGWFHTGDLGEWTPD----------GFLRVTDRKKYIIVLSTGKNVAP 457
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 421
+E+ L S I Q VV+G Q+ A++ + E+V A+ + H DA
Sbjct: 458 QAVEQKLLLSPWIEQAVVLGNRQKYVAALLYLNPEKVQEWAR---LHHRDA 505
>gi|374597993|ref|ZP_09670995.1| AMP-dependent synthetase and ligase [Myroides odoratus DSM 2801]
gi|423323671|ref|ZP_17301513.1| hypothetical protein HMPREF9716_00870 [Myroides odoratimimus CIP
103059]
gi|373909463|gb|EHQ41312.1| AMP-dependent synthetase and ligase [Myroides odoratus DSM 2801]
gi|404609198|gb|EKB08594.1| hypothetical protein HMPREF9716_00870 [Myroides odoratimimus CIP
103059]
Length = 591
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 183/395 (46%), Gaps = 74/395 (18%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
K LS LP HV+ER Y G+ + Y ++ + ++++ +P+ M VP + E +Y
Sbjct: 218 KALSFLPLCHVFERMLIYLYQYSGVGIYYAESIDKMGENMKEVKPNVMTVVPRLLEKVYD 277
Query: 133 GIQKQIFTSSAARRVVARAL----IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+IF + +A + +++ + + F Y + R GF
Sbjct: 278 ----KIFATGSALTGIKKSIFFWALELGFKYQPYNR---GF------------------- 311
Query: 189 WARIICAILWPLHL-LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
+ L L +A KLV+KK Q A+G K VSG +L + + A G+ V
Sbjct: 312 --------FYNLQLGIARKLVFKKWQEALGGEMKIIVSGSAALQPRLSRVFNAAGIPVME 363
Query: 247 GYGLTESSPVIAA--RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 304
GYGLTE+SPVIA R +G+VG P+++ +KI AE E+L +G
Sbjct: 364 GYGLTETSPVIAVNDERNKSMKIGTVGKPLSNVVVKI--AEDGEIL---------CKGPN 412
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
VM GY+K+ TK+ L +DG+ +TGDIG I G L + R K+ S
Sbjct: 413 VMLGYYKDEERTKEEL-KDGYFHTGDIGTIDEE----------GFLKITDRKKEMFKTSG 461
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE- 423
G+ V P +E +S I QI+VIG+ ++ P A+I P+ E V AKR +I + +E
Sbjct: 462 GKYVAPQIIENTLKQSRFIEQIMVIGEGEKMPAALIQPNFEFVREWAKRKNIALGNTNEE 521
Query: 424 --------LSKEKTISLLYGELRKWTSKCSFQIGP 450
EK + + + KW F++ P
Sbjct: 522 LIQNEQVRQRIEKEVEFVNRKFGKWEQVKKFELTP 556
>gi|83815592|ref|YP_446479.1| AMP-binding protein [Salinibacter ruber DSM 13855]
gi|83756986|gb|ABC45099.1| AMP-binding enzyme, putative [Salinibacter ruber DSM 13855]
Length = 632
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 185/416 (44%), Gaps = 57/416 (13%)
Query: 67 VPAENGDKFLSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVP 124
+P D LS LP H +ER G+ + + G + Y ++ + +LQ QP MISVP
Sbjct: 221 IPIGEDDHHLSFLPLSHAFERTAGHTAVLAAGATISYAESIEAVSQNLQEVQPTLMISVP 280
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
++E +Y + KQ ++ + +A +R E + P+ L
Sbjct: 281 RMFEKVYKRVTKQAKEGGPLKQAL------FDWAVGVGERHAE--AQQKTGSGPNLL--- 329
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
L +A +LV+ K+ +G + + SGG +LP I F++A GV
Sbjct: 330 ------------LRGQRAVAHRLVFSKLHEKLGGNLRFAASGGAALPEEIGTFFQAAGVT 377
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS--------- 294
+ GYGLTE++PV+ G+VGH + + I E NE PAG+
Sbjct: 378 IIEGYGLTETAPVLTINPLDAPRYGTVGHVMPGVTVAIQPLEENE--PAGAVSGSDYPTS 435
Query: 295 ----KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 350
+G + V+G VM+ Y+ P T+ A DGW +TGD+G R G L
Sbjct: 436 LSTPEGEILVKGPNVMKEYWNQPEETRAAFGPDGWYHTGDVG-----------RFEEGYL 484
Query: 351 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 410
+ R K IV G+NV P +EE + I QIVV+G+ + A++VPD + + M
Sbjct: 485 KITDRIKHMIVTEGGKNVYPGPIEETFKTKNWINQIVVVGEGRPFLAALVVPDFDALRMR 544
Query: 411 AKRLSIVHA--DASELSKEKTISLLYGEL---RKWTSKCSFQIGPIHVVDEPFTVN 461
A+ I + D +EL L+ ++ + +I ++ EPFTV
Sbjct: 545 ARDEGIDESTCDDAELLHHDAAQALFQDVFTAYNRDAAAHEKIRNFRLLGEPFTVE 600
>gi|383620427|ref|ZP_09946833.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
gi|448697788|ref|ZP_21698666.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
gi|445781154|gb|EMA32015.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
Length = 671
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 174/376 (46%), Gaps = 61/376 (16%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVY 127
++ K +S LP HV+ER G+F+ F+ G + Y + L++D QP SVP VY
Sbjct: 255 DDDSKMVSYLPLAHVFERTAGHFLPFAAGATVAYAESSETLQEDFGAVQPTGATSVPRVY 314
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E +Y I++Q S R+ A T + Y+ R L A +
Sbjct: 315 EKIYDAIREQATESPIKERIFNWA--------TDVGKEYQ-----RTDDPGPILEAKLS- 360
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
+A+KLV+ +++ A+G + + VSGGG+L + Y +G+ +
Sbjct: 361 ---------------IADKLVFSQVKEALGGNIEMLVSGGGTLSPDLCTLYHGMGLPIFE 405
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVKVRGS 303
GYGLTE++PV+ P +G+VG + E+K+ D + G G + V+G
Sbjct: 406 GYGLTETAPVVTTNPPEEPKIGTVGPAVPGCEVKVDDTVVPDGEAADTPGETGELLVKGP 465
Query: 304 QVMQGYFKNPSATKQALDED----------------GWLNTGDIGWIAPHHSRGRSRRCG 347
V +GY++ P AT +A ED W TGDI I P
Sbjct: 466 NVAEGYWEKPEATDRAFTEDVPASTASGESEDSSSGRWFRTGDIVTIRPD---------- 515
Query: 348 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
G +V RAK +VLSTG+NV P +E+A + Q +V+G ++ GA+IVP+ + +
Sbjct: 516 GYVVFHERAKQLLVLSTGKNVAPAPIEDAFAAREPVEQCMVVGDGEKFVGALIVPNVDAL 575
Query: 408 LMAAKRLSIVHADASE 423
A+ + D++E
Sbjct: 576 RRLAENEGVDLPDSAE 591
>gi|448342595|ref|ZP_21531543.1| AMP-dependent synthetase and ligase [Natrinema gari JCM 14663]
gi|445625350|gb|ELY78712.1| AMP-dependent synthetase and ligase [Natrinema gari JCM 14663]
Length = 674
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 172/376 (45%), Gaps = 72/376 (19%)
Query: 65 DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMI 121
D VP N + LS LP HV+ER G+F+ F+ G + Y + L++D +P
Sbjct: 250 DDVPVLNEESVALSYLPLAHVFERTAGHFVLFASGACIAYAESPDTLQEDFSLVEPTTAT 309
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
SVP VYE +Y GI+++ S+A +R+ A + AY + + P
Sbjct: 310 SVPRVYEKIYDGIREEASQSAAKQRIFEWA-TDVGVAY-------------QQAESPG-- 353
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
IL LA+ LV+ ++ A+G + + +SGGGSL + Y A+
Sbjct: 354 -------------PILSAKQALADTLVFSTVREALGGNIEILISGGGSLSPELCRLYHAM 400
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK- 299
G+ + GYGLTE++P++A P +G++G P+ + + + + ++ A G V
Sbjct: 401 GLPIFEGYGLTETAPIVATNPPEAATIGTIGPPLCNVSVTVDETVADQEAFADDPGEVGE 460
Query: 300 --VRGSQVMQGYFKNPSATKQALDE--------------------------DGWLNTGDI 331
VRG V QGY+ P AT+ A + W TGDI
Sbjct: 461 LLVRGPNVTQGYWNKPGATEGAFIDAVPGETAARSNESGDADASGGSAAASGQWFRTGDI 520
Query: 332 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 391
I P G L R K IVLSTG+NV P +E+A S ++ Q +V+G
Sbjct: 521 IHIRPD----------GYLEFRDRVKQIIVLSTGKNVAPGPIEDAFAASEIVEQAMVVGD 570
Query: 392 DQRRPGAIIVPDKEEV 407
++ GA++VP+ + V
Sbjct: 571 GEKFIGALLVPNTDHV 586
>gi|375264373|ref|YP_005021816.1| long-chain-fatty-acid-CoA ligase [Vibrio sp. EJY3]
gi|369839697|gb|AEX20841.1| long-chain-fatty-acid-CoA ligase [Vibrio sp. EJY3]
Length = 599
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L + +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLKDTAQVRDALSQVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ F + C + ++QPS +
Sbjct: 280 SAIHEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKRQPSIM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ A+G+ V++GYG+
Sbjct: 321 -----LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAMGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDYCFDPDSIGTSMPGAQVKI--GANNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNELQKELAKFEQVKKFKLLP 562
>gi|298375259|ref|ZP_06985216.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_19]
gi|298267759|gb|EFI09415.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_19]
Length = 633
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 187/381 (49%), Gaps = 54/381 (14%)
Query: 74 KFLSMLPPWHVYERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVP 124
+ L +LP H + G++IF S+G +++ T + LK+ +++ ++P+ ++SVP
Sbjct: 221 RTLVILPLDHCFAHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVP 280
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+ + I++ I + +RI + Y EG
Sbjct: 281 ALAKNFKKNIEQGIRARGKNAVRLFNLALRIGYIYNGDSDEEEGKGF------------- 327
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
RI +L PL L +KL++ K++ G K + GG L + FY A+G+
Sbjct: 328 ------RI---LLKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIP 378
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
+ GYGL+E++P+I+ P +V GS G + ++KI D + N VLP G KG + +RG
Sbjct: 379 MYQGYGLSEATPIISTNGPRRHVFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGE 437
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM GY+KNP++T + E GWL TGD+G++ G+L + GR K ++ S
Sbjct: 438 NVMAGYWKNPASTADTVKE-GWLYTGDMGYMRD-----------GLLYVLGRFKSLLIGS 485
Query: 364 TGENVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-- 420
GE P +EEA + SS I Q+++ A++VP+KE + R + H +
Sbjct: 486 DGEKYSPEGIEEALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLD 540
Query: 421 -ASELSKEKTISLLYGELRKW 440
S+ +E+ I ++ ++ ++
Sbjct: 541 LTSDQGREEAIRIIQRQIDRF 561
>gi|227114206|ref|ZP_03827862.1| putative AMP-binding protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 601
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 198/440 (45%), Gaps = 60/440 (13%)
Query: 34 RDL-PLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHVYER 87
RDL LF+ + T P M ++ Q++ D + D L LP HV+ER
Sbjct: 178 RDLNDLFTLIYTSGTTGEPKGVMLDYTNMAMQLKLHDDRLDMSENDVSLCFLPLSHVFER 237
Query: 88 ACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR- 145
A + I RG + +Y NL ++ +Q +P M +VP YE +YS I +++ + R
Sbjct: 238 AWSFVIMHRGAQNVYLNNTNLVREAMQTVKPTVMCAVPRFYEKVYSAIHEKVAQAPWYRQ 297
Query: 146 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 205
R+ A+ + +A+ A + +G R +H A+
Sbjct: 298 RLFNWAIAQGQYAFLASQTAKKGGLFRR-------------------------VMHHYAD 332
Query: 206 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 264
+LV K++ +G + + G L +I LF+ +IG+++ GYG+TE+ ++
Sbjct: 333 RLVLGKLRQLLGGEIRFMPAAGARLDDNIILFFRSIGIRIIYGYGMTETCATVSCWEEGR 392
Query: 265 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 324
LGS+G P+ E++I G + ++VRG+ +M+GYF P T EDG
Sbjct: 393 FRLGSIGTPLPGIEVRI-----------GEEKEIQVRGATIMRGYFHRPQETADTFTEDG 441
Query: 325 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 384
WL TGD G + G L + R KD + S G+ + P LE + I
Sbjct: 442 WLKTGDAGELD----------ANGNLFITERLKDLMKTSGGKYIAPQHLEGTLGQDRFIE 491
Query: 385 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----ELRKW 440
Q+ +I ++ A+IVP E + A +++ + D EL + I L+ E++K
Sbjct: 492 QVAIIADTRKYVSALIVPCFEALEEYAHSINLKYHDRLELLRHSHIIELFEQRLREIQKE 551
Query: 441 TSKCSFQIGPIHVVDEPFTV 460
S+ Q+ ++ PF++
Sbjct: 552 LSRVE-QVKKFTLLPVPFSM 570
>gi|384190057|ref|YP_005575805.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|384192846|ref|YP_005578593.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
gi|289177549|gb|ADC84795.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|340365583|gb|AEK30874.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
Length = 629
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 159/350 (45%), Gaps = 52/350 (14%)
Query: 61 RSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQ 116
R+ D VP E + L LP H + R YF F+ G+ + + L D+Q ++
Sbjct: 235 RAAADCVPEVLEGNSRLLLFLPLAHCFARFIQYFAFTSDAGVIGYLPSTKTLPHDMQVFE 294
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P ++++VP V+E +Y+ ++ T R + A++ + FA + G T QK
Sbjct: 295 PTFVLAVPRVFEKVYNAASRKAGTGWKGR-LFAKS---VEFAREWTEMEQAGIAPTPKQK 350
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
H + EKLVY I+SA G K GG L +
Sbjct: 351 AE----------------------HAMYEKLVYSTIRSAFGPRIKYLACGGAPLDRKLAT 388
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ IG+ + GYGLTE++ A R NV+G+VG P+ + ++I
Sbjct: 389 FFNGIGLTMIQGYGLTETAAPFAFTRVHDNVIGTVGQPVPGSSVRI-----------SPT 437
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G ++V+G V GY P T + EDGWL TGD+ I G + L GR
Sbjct: 438 GELEVKGQNVFLGYHNLPEKTTETFAEDGWLKTGDLASIDDE----------GHITLTGR 487
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
AKD I+ + G+NV P+ +E+ ++ VV+G ++ GA+I D+E
Sbjct: 488 AKDIIITAGGKNVSPIPMEQEISTCPIVEHAVVVGDNRPFVGAVITLDQE 537
>gi|365879381|ref|ZP_09418805.1| putative Long-chain-fatty-acid--CoA ligase [Bradyrhizobium sp. ORS
375]
gi|365292632|emb|CCD91336.1| putative Long-chain-fatty-acid--CoA ligase [Bradyrhizobium sp. ORS
375]
Length = 641
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 168/346 (48%), Gaps = 49/346 (14%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
+++++ + A + D FLS LP H +ER GY+ + G + Y +V+ L +DL +
Sbjct: 246 NLKAIHQRLAAASEDVFLSFLPLSHTFERTAGYYYPIAIGASVAYARSVKQLPEDLLEVR 305
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P +ISVP +YE +YS + +S +ARAL+ ++ A + F +
Sbjct: 306 PTILISVPRIYERIYSLVMHHRAVASP----LARALMDMTIAVGGRR-----FDAQHGRG 356
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
S L L WP L +++V K+ + G + VSGG + +
Sbjct: 357 AQSALDRLA------------WP---LLKRIVADKVLARFGGRLQVAVSGGAPIAEPVVR 401
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
+ A+G++V GYG+TE+SPV++ P N +VG + E++I G+
Sbjct: 402 LFLALGLEVLQGYGMTETSPVVSVNTPDDNDPRTVGRALPGVEVRI-----------GAN 450
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
+ VRG VM GY+ P T + + DGWL+TGD I H R + + GR
Sbjct: 451 DELMVRGPNVMLGYWHKPDETARIKEADGWLHTGDQASI--DHGR---------ITITGR 499
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
KD +V STGE + P +LE A L L Q +VIG+++ AI+V
Sbjct: 500 IKDILVTSTGEKIAPADLETAILTDPLFEQAIVIGENRPFLAAIVV 545
>gi|227327104|ref|ZP_03831128.1| putative AMP-binding protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 601
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 198/440 (45%), Gaps = 60/440 (13%)
Query: 34 RDL-PLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHVYER 87
RDL LF+ + T P M ++ Q++ D + D L LP HV+ER
Sbjct: 178 RDLNDLFTLIYTSGTTGEPKGVMLDYTNMAVQLKLHDDRLDMSENDVSLCFLPLSHVFER 237
Query: 88 ACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR- 145
A + I RG + +Y + NL + +Q +P M +VP YE +YS I +++ + R
Sbjct: 238 AWSFVIMHRGAQNVYLSDTNLVRAAMQAVKPTVMCAVPRFYEKVYSAIHEKVAQAPWYRQ 297
Query: 146 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 205
R+ AL + A+ A + +G R +H A+
Sbjct: 298 RLFNWALAQGQHAFLASQAAKKGGLFRR-------------------------VMHRYAD 332
Query: 206 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 264
+LV K++ +G + + G L +I LF+ +IG+++ GYG+TE+ ++
Sbjct: 333 RLVLGKLRQLLGGEIRFMPAAGARLDDNIILFFRSIGIRIIYGYGMTETCATVSCWEEGR 392
Query: 265 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 324
LGS+G P+ E++I G + ++VRG+ +M+GYF P T + EDG
Sbjct: 393 FRLGSIGTPLPGIEVRI-----------GEEKEIQVRGATIMRGYFHRPQETAETFTEDG 441
Query: 325 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 384
WL TGD G + G L + R KD + S G+ + P LE + I
Sbjct: 442 WLKTGDAGELD----------ANGNLFITERLKDLMKTSGGKYIAPQHLEGTLGQDRFIE 491
Query: 385 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----ELRKW 440
Q+ +I ++ A+IVP E + A +++ + D EL + I L+ E++K
Sbjct: 492 QVAIIADTRKYVSALIVPCFEALEEYAHSINLKYHDRLELLRHSHIIELFEQRLREMQKE 551
Query: 441 TSKCSFQIGPIHVVDEPFTV 460
S+ Q+ ++ PF++
Sbjct: 552 LSRVE-QVKKFTLLPVPFSM 570
>gi|452948719|gb|EME54197.1| long-chain acyl-CoA synthetase [Amycolatopsis decaplanina DSM
44594]
Length = 599
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 160/338 (47%), Gaps = 51/338 (15%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYE 128
E G+ L LP HV RA S + L +T+ V+NL DL ++P ++++VP V+E
Sbjct: 222 EQGNSLLVFLPLAHVLARAIAVTALSARVTLGHTSDVKNLVADLGTFRPTFVVAVPRVFE 281
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+G +++ + A +++ +Q Q + L
Sbjct: 282 KVYNGAKQKAHGDGKGKIFDAAEATAVAY----------------SQAQDNGGAGLG--- 322
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
L H L +KLV+ K+++A+G A VSGG L + + F+ IGV V G
Sbjct: 323 --------LKVKHALFDKLVFTKLRAALGGRCIAAVSGGAPLGVRLAHFFRGIGVPVFEG 374
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTE+S +G+VG P+ T ++I D G + ++G V
Sbjct: 375 YGLTETSAAACVGTQDGFRVGTVGRPVAGTSVRIAD-----------DGEILLKGDVVFG 423
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GYF N AT +AL EDGW +TGD+G + G L + GR K+ IV + G+N
Sbjct: 424 GYFNNAEATAEAL-EDGWFHTGDLGEL----------DGDGFLKITGRKKEIIVTAGGKN 472
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
V P LE+ S L+ Q +V+G + GA+I D+E
Sbjct: 473 VAPSGLEDTIKASPLVSQAMVVGDQRPFIGALITIDEE 510
>gi|326797469|ref|YP_004315288.1| long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
gi|326548233|gb|ADZ76618.1| Long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
Length = 597
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 171/365 (46%), Gaps = 53/365 (14%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYE 128
EN +S LP H++ER Y F +GI + Y + + D+ +P+ +VP V E
Sbjct: 208 ENYKTAISFLPLCHIFERMVVYLYFYKGISVYYAENMDTIVADINDVKPNGFTTVPRVLE 267
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y I + +AL I A + L K+P +
Sbjct: 268 KVYDKIVDK-----------GKALTGIKHAL-----FFWALDLGLKFKEPRK-----NSF 306
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVG 247
+ +I AI A KL++KK Q A+G + G+ SGG +L + + A G+ V G
Sbjct: 307 FYKIKLAI-------ARKLIFKKWQMALGGNIVGIISGGAALQERLARVFWAAGIPVLEG 359
Query: 248 YGLTESSPVIAARRPTCNVLG--SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
YGLTE+SPVIA N LG +VG + ++KI S G + +G V
Sbjct: 360 YGLTETSPVIAVNNFERNGLGFGTVGPLLKSVKVKIA-----------SDGEILCKGPNV 408
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
+GY+KN AT++A DEDG+ TGDIG + G L + R K+ + G
Sbjct: 409 TKGYYKNDEATREAFDEDGYFKTGDIGELTTE----------GFLRITDRKKEMFKTAGG 458
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 425
+ V P +E + S+LI QI+VIG+ +R P A+IVP EE+ A + I + +L
Sbjct: 459 KYVAPQIIENKFMESTLIAQIMVIGEGKRFPAALIVPAFEELKKWAGKNGISGSTKEDLI 518
Query: 426 KEKTI 430
K+ +
Sbjct: 519 KDPKV 523
>gi|326336308|ref|ZP_08202479.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691482|gb|EGD33450.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 596
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 208/442 (47%), Gaps = 57/442 (12%)
Query: 31 FSRRDL-PLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHV 84
FS+R+L +++ + T P + ++ Q+ + + + + G+ +S LP HV
Sbjct: 173 FSQRNLQDIYTIIYTSGTTGKPKGVLIDYENVAYQLINHDERLTVKEGNVSMSFLPLSHV 232
Query: 85 YERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 143
YER ++ +G+ Y N + + L+ +PHYM VP + E +Y+ I + + S
Sbjct: 233 YERLWLAYVLHKGVINCYLDDTNRVAEALKEVKPHYMCVVPRLLEKIYTKIYENVGKQSL 292
Query: 144 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 203
+R++ SFA TR K + L + + IL L+
Sbjct: 293 IKRMI------FSFA-------------TRTAK-----IHLKQKRKGKRVSFILQELYNF 328
Query: 204 AEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 262
++KLV++K++ A+G + + GG+L I F+ AIGV V +GYG+TE++ +A
Sbjct: 329 SDKLVFRKLKEALGGNIQMIPCGGALLEPSIGRFFRAIGVNVTLGYGMTETTATVACWDI 388
Query: 263 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 322
L SVG + + E+KI E NE+L ++G + +GY+ NP +A
Sbjct: 389 KFK-LKSVGTVLPNIEVKI--GENNEIL---------LKGGSITKGYYNNPEENVKAFTS 436
Query: 323 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 382
DG+ TGD G++ G L + R K+ + S G+ + P ++E + S
Sbjct: 437 DGYFRTGDAGYLDKE----------GNLFITERIKELMKTSNGKYIAPQQIEGKVGKDSF 486
Query: 383 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELRKWT 441
I QI +I ++ A+IVP+ + ++ AK L++ + + S+L K I L+
Sbjct: 487 IEQIAIIADARKYVSALIVPNYDALVEYAKSLNLKYKNYSDLIKNSQIVDFFQKRLQNLQ 546
Query: 442 SKCSF--QIGPIHVVDEPFTVN 461
+ QI ++ PF++N
Sbjct: 547 QGLAAYEQIKKFTLLTTPFSIN 568
>gi|448711889|ref|ZP_21701432.1| AMP-dependent synthetase and ligase [Halobiforma nitratireducens
JCM 10879]
gi|445790974|gb|EMA41623.1| AMP-dependent synthetase and ligase [Halobiforma nitratireducens
JCM 10879]
Length = 660
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 174/357 (48%), Gaps = 57/357 (15%)
Query: 65 DIVPAENGD-KFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMI 121
D +P+ + D + +S LP HV+ER G+F+ F+ G + Y + L++D QP+
Sbjct: 251 DDLPSIDEDAQTVSYLPLAHVFERTAGHFLMFASGGCVAYAEDPDTLQEDFSTVQPNTAT 310
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
SVP VYE +Y I++Q S +R+ A T + Y + P
Sbjct: 311 SVPRVYEKIYDAIREQASESPVKKRIFEWA--------TDVGKEY------QETDDPG-- 354
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
A+L LA+KLV+ ++ A+G + +SGGGSL + Y A+
Sbjct: 355 -------------AVLSAKQALADKLVFSTVRDALGGEIEILISGGGSLSPELCTLYHAM 401
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD--AETNEVLPAGSKGIV 298
G+ + GYGLTE++PV+ P +G++G + E+++ + A+ + G G +
Sbjct: 402 GLPIFEGYGLTETAPVLTVNPPEEPKIGTIGPALPDVELQVDESVADQSAFDDPGDVGEL 461
Query: 299 KVRGSQVMQGYFKNPSATKQALDE-------DG-----WLNTGDIGWIAPHHSRGRSRRC 346
VRG V GY++ PSAT ++ E DG W TGDI + P
Sbjct: 462 LVRGPNVTDGYWEKPSATDRSFTESAPASETDGSTSGKWFRTGDIVHMRPD--------- 512
Query: 347 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
G + R K +VLSTG+NV P +E+A S ++ Q +V+G +++ GA++VP+
Sbjct: 513 -GYVEFRDRVKQILVLSTGKNVAPGPIEDAFAASEIVEQAMVVGDNEKFVGALLVPN 568
>gi|299531038|ref|ZP_07044451.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
gi|298720995|gb|EFI61939.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
Length = 649
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 187/393 (47%), Gaps = 43/393 (10%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H +ER GY++ + G + Y +V L D+++ +P +ISVP +YE +
Sbjct: 257 DVFLSFLPLSHTFERTAGYYLAVATGSCVAYARSVAQLAQDMKQVKPTVLISVPRIYERV 316
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +Q+ + +S ++ A+ + ++ A + + G + + + S+ AL WL
Sbjct: 317 YAKVQESLASSPFKHKLFDAAVNKGWKSFCAHQGMPLG---EQPEAKASWASALPGWLLR 373
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
+++ L L +L + VSGG L I + +G+ + GYG+
Sbjct: 374 KLVAQPL--LAQFGGRL------------RVAVSGGAPLSPTIARTFLGLGLPMVQGYGM 419
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++PV++A N +VGH + E++I D + ++V G VM+GY+
Sbjct: 420 TETAPVVSANGLDDNWPDTVGHVLPGIEVRIGDDQE-----------LQVSGPVVMRGYW 468
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P T +A DGWL TGD I GR R ++GR K+ IV STGE V P
Sbjct: 469 NRPEDTAKAFTADGWLRTGDQASI----ENGRIR-------IKGRIKEIIVTSTGEKVPP 517
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
++E+A L L Q+ V+G+D+ I V + E M A+ + + D S L
Sbjct: 518 NDVEQAILVDPLFEQVFVVGEDRPFIACIAVVGQVEWEMLARSVGLNPNDGSSLQHAAAE 577
Query: 431 SLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 461
+ + T + P IH+V + + ++
Sbjct: 578 REALARIERQTRSFARYAVPRAIHLVRDSWNID 610
>gi|154492200|ref|ZP_02031826.1| hypothetical protein PARMER_01834 [Parabacteroides merdae ATCC
43184]
gi|423345257|ref|ZP_17322946.1| hypothetical protein HMPREF1060_00618 [Parabacteroides merdae
CL03T12C32]
gi|423722201|ref|ZP_17696377.1| hypothetical protein HMPREF1078_00440 [Parabacteroides merdae
CL09T00C40]
gi|154087425|gb|EDN86470.1| AMP-binding enzyme [Parabacteroides merdae ATCC 43184]
gi|409223043|gb|EKN15980.1| hypothetical protein HMPREF1060_00618 [Parabacteroides merdae
CL03T12C32]
gi|409242692|gb|EKN35453.1| hypothetical protein HMPREF1078_00440 [Parabacteroides merdae
CL09T00C40]
Length = 635
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 190/377 (50%), Gaps = 49/377 (12%)
Query: 76 LSMLPPWHVYERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLV 126
L +LP H + G++IF S+G +++ T + LK+ +++ ++P+ ++SVP +
Sbjct: 222 LIILPLDHCFAHVVGFYIFMSKGASVATVQVGRTGLETLKNIPVNIKEFKPYLILSVPAL 281
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
+ I++ I + +++++ Y R +G
Sbjct: 282 AKNFKKNIEQGIRAQGKNITRLFDFALKVAYIYNGDGREDKG------------------ 323
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 245
R + +L PL L + +++ K++ G K + GG L + FY AIG+ +
Sbjct: 324 ----RGVRFLLKPLVSLFDHMLFTKVRENFGGQLKFFIGGGALLDKDLQKFYYAIGLPMY 379
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGL+E++PVI+ P + GS G + ++KI DA+ E LPAG KG + +RG V
Sbjct: 380 QGYGLSEATPVISTNGPHRHTFGSSGMLVRPLDLKICDADGKE-LPAGEKGEIVIRGENV 438
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
M GY+KNP +T + + DGWL TGD+G++ H G+L + GR K ++ S G
Sbjct: 439 MAGYWKNPVSTAETV-RDGWLYTGDMGYMG--HD--------GLLYVLGRFKSLLIGSDG 487
Query: 366 ENVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASE 423
E P +EEA + SS I Q+++ A++VP+K+ + K L+ + D +S+
Sbjct: 488 EKYSPEGIEEALVEHSSCIDQLILYNNQSPYTVALVVPNKDRL---KKHLTHQYLDLSSD 544
Query: 424 LSKEKTISLLYGELRKW 440
+E+ I ++ ++ ++
Sbjct: 545 KGREEAIRIIQSQIDRF 561
>gi|448491555|ref|ZP_21608395.1| AMP-dependent synthetase and ligase [Halorubrum californiensis DSM
19288]
gi|445692555|gb|ELZ44726.1| AMP-dependent synthetase and ligase [Halorubrum californiensis DSM
19288]
Length = 684
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 174/389 (44%), Gaps = 81/389 (20%)
Query: 76 LSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G Y +F+ G + Y + L++D +P SVP VYE LY
Sbjct: 268 LSFLPLAHVFERMAGHYMMFAAGATVAYAESPDTLREDFGLVRPTTTTSVPRVYEKLYDA 327
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q SS R+ A+ + R + AL+D A
Sbjct: 328 IREQASESSVKERIFEWAV-----------------DVGRAHHEADDPGALLDAKRA--- 367
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
+A++LV+ ++ AIG + +SGGGSL + Y A+ + + GYGLTE
Sbjct: 368 ---------VADRLVFSSVREAIGGNIDFFISGGGSLSAELCALYHAMDLPILEGYGLTE 418
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP--AGSKGIVKVRGSQVMQGYF 310
+SPVI P +G++G P+ TEI I D E + AG G + VRG QV +GY+
Sbjct: 419 TSPVICVNPPERPQVGTIGPPVVDTEIAIDDGVVGEEVADLAGDVGELLVRGPQVTEGYW 478
Query: 311 KNPSATKQA------LDEDG-------------------------WLNTGDIGWIAPHHS 339
P AT A L ED W TGDI + P
Sbjct: 479 NRPDATADAFVDADDLPEDAVTAGTPPDERVGEGATDAAAAAGEPWFRTGDIVQLRPD-- 536
Query: 340 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 399
G + RAK +VLSTG+NV P +E+ + + Q VV+G ++ A+
Sbjct: 537 --------GYVAFRERAKQLLVLSTGKNVAPGPIEDRFAANEFVEQCVVLGDGRKFVSAL 588
Query: 400 IVPDKEEVLMAAKRLSIVHADASELSKEK 428
IVP+ E++ A+ AD +L +E+
Sbjct: 589 IVPNFEQLTAWAE------ADGVDLPEER 611
>gi|238060302|ref|ZP_04605011.1| AMP-dependent synthetase and ligase [Micromonospora sp. ATCC 39149]
gi|237882113|gb|EEP70941.1| AMP-dependent synthetase and ligase [Micromonospora sp. ATCC 39149]
Length = 605
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 166/365 (45%), Gaps = 59/365 (16%)
Query: 53 PKMTNFQIRSLY----DIVPA------ENGDKFLSMLPPWHVYERACGYFIF-SRGIELM 101
PK R++Y + VPA G L LP H + R + +R
Sbjct: 199 PKGCVLTHRNMYADIANAVPALPNLFLRPGASTLLFLPLAHSFARLIQIGVVQARATMAH 258
Query: 102 YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 161
T +NL +LQ ++P +++SVP V+E +Y+G +++ R + ++++
Sbjct: 259 CTDTKNLVGELQAFRPTFVLSVPRVFEKVYNGARQKAEADGKGRIFDRAEQVAVAYSEAL 318
Query: 162 FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISK 220
K G L R Q H + ++LVY+K+++A+G +
Sbjct: 319 EKPGGPGLAL-RAQ-------------------------HAVFDRLVYRKLRAALGGRCR 352
Query: 221 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 280
+SGG L + F+ IGV + GYGLTE+SP + P +G+VG P+ I+
Sbjct: 353 DAISGGAPLGARLGHFFRGIGVTICEGYGLTETSPAASVNLPDATKIGTVGRPLPGVTIR 412
Query: 281 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 340
I D G + + G+ + QGY++N +AT +AL DGW TGD+G +
Sbjct: 413 IDD-----------DGEILISGNLIFQGYWRNETATAEALSPDGWFRTGDLGQL------ 455
Query: 341 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 400
G L + GR K+ IV + G+NV P LE+ LI Q VVIG Q A++
Sbjct: 456 ----DTDGFLSITGRKKEIIVTAGGKNVAPAVLEDQVRAHPLISQCVVIGDRQPFIAALV 511
Query: 401 VPDKE 405
D+E
Sbjct: 512 TIDEE 516
>gi|121604076|ref|YP_981405.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
gi|120593045|gb|ABM36484.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
Length = 616
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 183/368 (49%), Gaps = 46/368 (12%)
Query: 63 LYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYM 120
L +VP GD FLS LP H +ER GY++ + G + Y +V L +DL+ +P +
Sbjct: 216 LERVVPTA-GDVFLSFLPLSHTFERTAGYYLPLAVGSCVAYARSVALLAEDLKTVRPTVL 274
Query: 121 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI-YEGFCLTRNQKQPS 179
+SVP +YE +++ + + + S+ R+ + A + + + FC + Q P
Sbjct: 275 VSVPRIYERVFARLHESLAGSAFRTRL-----------FNAAQAVGWRRFC--KVQGLP- 320
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 238
L A WA ++ +LWP ++LV +K+++ G + VSGG L + +
Sbjct: 321 -LAAGEGSAWA-MLDPLLWPFL---DRLVARKLRAQFGGRVRVAVSGGAPLSHAVARCFL 375
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+GV + GYG+TE+SPV+AA N +VG + E++I D +
Sbjct: 376 GLGVPLLQGYGMTETSPVVAANGVDDNDPATVGRALPGIEVRIGDNRE-----------L 424
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+VRG VM+GY+K T + L DGWL+TGD I GR R + GR K+
Sbjct: 425 QVRGPSVMKGYWKRAEDTARVLTPDGWLSTGDQADI----QDGRIR-------IMGRIKE 473
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
IV STGE V P +LE A L Q++V+G+++ G + V +K E A L +
Sbjct: 474 IIVTSTGEKVPPGDLELAIAVDPLFAQVMVVGENRPFIGCVAVVNKAEWQRLAASLGLDP 533
Query: 419 ADASELSK 426
A+ LS+
Sbjct: 534 IAAASLSQ 541
>gi|381162311|ref|ZP_09871541.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
azurea NA-128]
gi|379254216|gb|EHY88142.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
azurea NA-128]
Length = 598
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 160/336 (47%), Gaps = 51/336 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G+ L LP H+ RA + + L +TA ++ L +DL ++P ++++VP V+E +
Sbjct: 223 GNSLLLFLPLAHILARAIAITAITSRVTLGHTADIKELVNDLGTFRPTFVVAVPRVFEKV 282
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+G + + T + + A + + + PS+ + +
Sbjct: 283 YNGAKLKAHTGGKGK------------IFDAAEATAVAYSQALDTGGPSFGLRV------ 324
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
H + KLVY K+Q+A+G A VSGG L + F+ IGV V GYG
Sbjct: 325 ---------KHAVFSKLVYSKLQAALGGRCVAAVSGGAPLGARLAHFFRGIGVPVFEGYG 375
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+S +G+VG P+ T ++I AE EVL ++G V Y
Sbjct: 376 LTETSAAANVNTEDAFKVGTVGKPVAGTSVRI--AEDGEVL---------LKGDVVFTRY 424
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ NP AT+++L EDGW +TGDIG + G L + GR K+ IV + G+NV
Sbjct: 425 WNNPEATRESL-EDGWFHTGDIGEL----------DADGFLKITGRKKEIIVTAGGKNVA 473
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+A LI Q +V+G + GA++ D+E
Sbjct: 474 PSGLEDALKADPLISQAMVVGDQRPFIGALVTIDEE 509
>gi|448440850|ref|ZP_21588848.1| AMP-dependent synthetase and ligase [Halorubrum saccharovorum DSM
1137]
gi|445689758|gb|ELZ41984.1| AMP-dependent synthetase and ligase [Halorubrum saccharovorum DSM
1137]
Length = 690
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 186/416 (44%), Gaps = 71/416 (17%)
Query: 76 LSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G Y +F+ G + Y + L++D +P SVP VYE LY
Sbjct: 282 LSFLPLAHVFERLAGHYMMFAAGATVGYAESPDTLREDFGLVRPTTTTSVPRVYEKLYDA 341
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q S R+ A+ + R + AL+D A
Sbjct: 342 IREQASESPVKERIFEWAV-----------------GVGRAHHEADRPGALLDAKRA--- 381
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
+A+KLV+ ++ AIG + +SGGGSL + Y A+ + + GYGLTE
Sbjct: 382 ---------IADKLVFSSVREAIGGNVDFFISGGGSLSAELCALYHAMDLPILEGYGLTE 432
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP--AGSKGIVKVRGSQVMQGYF 310
+SPVI P +G++G P+ TE+ I A E AG G + VRG QV GY+
Sbjct: 433 TSPVICVNPPEEPKVGTIGPPVVDTEVAIDGAVVGEEAADLAGDVGELLVRGPQVTDGYW 492
Query: 311 KNPSATKQAL------------------DEDG-----WLNTGDIGWIAPHHSRGRSRRCG 347
P AT +A + DG W +TGDI + P
Sbjct: 493 NRPDATAEAFTDPDRLPEDAVVAGTPPDERDGDPDEPWFHTGDIVQLRPD---------- 542
Query: 348 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
G + RAK +VLSTG+NV P +E+ + + Q VV+G ++ A+IVP+ E+V
Sbjct: 543 GYVAFRERAKQLLVLSTGKNVAPGPIEDRFAANEFVEQCVVLGDGRKFVSALIVPNFEKV 602
Query: 408 LMAAKRLSI-VHADASELSKEKTI-SLLYGELRKWTSKCS--FQIGPIHVVDEPFT 459
A I + D E+ ++ + + E+ + + +I +VDE FT
Sbjct: 603 DAWADARGIDLPDDRKEICRDDRVRERIQEEVDRVNEEFEPYERIKQFRIVDEEFT 658
>gi|332291599|ref|YP_004430208.1| AMP-dependent synthetase and ligase [Krokinobacter sp. 4H-3-7-5]
gi|332169685|gb|AEE18940.1| AMP-dependent synthetase and ligase [Krokinobacter sp. 4H-3-7-5]
Length = 598
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 174/368 (47%), Gaps = 51/368 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ER+ +F GIE+ + + + + L+ +P M +VP ++E
Sbjct: 219 DQDVSLSFLPLSHIFERSWVFFCLHMGIEVYFNQDPKKIAEVLKEVRPTVMCTVPRIFEK 278
Query: 130 LYSGIQKQIFTSSAARRVVAR-ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+ IQ + ++ ++ +A AL Y +R+ + L N K
Sbjct: 279 IYAAIQAKTKEATPTKQKLASWALSVGDNYYNQHQRLEKKVPLGLNLK------------ 326
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQV 246
+ +A+K+V K+++ G + GG+ P+ D+ F+ + G+ V+
Sbjct: 327 ------------YKIADKIVLSKLRALFGGRIKFMPCGGA-PLAADMVSFFHSFGLDVKC 373
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE++ ++ T S G I TEIKI D +E+L V+G VM
Sbjct: 374 GYGLTETTATVSLFGYTNFEFNSAGKSIEGTEIKIGD--NDEIL---------VKGPGVM 422
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
QGY+K P AT Q +DGW TGD G + H G L + R KD + S G+
Sbjct: 423 QGYYKKPEATAQVF-KDGWFCTGDAGRLDEH----------GNLYITDRIKDLMKTSGGK 471
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
+ P +LE A + SLI Q+ VIG Q+ A+ VP+ E + A +I EL K
Sbjct: 472 YIAPQKLETALISDSLIEQLAVIGDQQKYVTALAVPNFENLKKYANEHNISFESMEELIK 531
Query: 427 EKTISLLY 434
+ + L+
Sbjct: 532 DNKVVALF 539
>gi|258625340|ref|ZP_05720239.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM603]
gi|258582381|gb|EEW07231.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM603]
Length = 601
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V +++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS+L
Sbjct: 280 SAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQNHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ I+ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATISCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T + DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLEKETADSFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|448336418|ref|ZP_21525517.1| AMP-dependent synthetase and ligase [Natrinema pallidum DSM 3751]
gi|445629158|gb|ELY82452.1| AMP-dependent synthetase and ligase [Natrinema pallidum DSM 3751]
Length = 674
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 175/385 (45%), Gaps = 72/385 (18%)
Query: 65 DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMI 121
D VP N + LS LP HV+ER G+F+ F+ G + Y + L++D +P
Sbjct: 250 DDVPVLNEESVALSYLPLAHVFERTAGHFVLFASGACVAYAESPDTLQEDFGLVEPTTAT 309
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
SVP VYE +Y GI+++ S A +R+ A + AY + + P
Sbjct: 310 SVPRVYEKIYDGIREEASQSPAKQRIFEWA-TDVGVAY-------------QQAESPG-- 353
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
IL LA+ LV+ ++ A+G + + +SGGGSL + Y A+
Sbjct: 354 -------------PILSAKQALADTLVFSTVREALGGNIEILISGGGSLSPELCRLYHAM 400
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK- 299
G+ + GYGLTE++P++A P +G++G P+ + E+ + + ++ A G V
Sbjct: 401 GLPIFEGYGLTETAPIVATNPPEAAKIGTIGPPLFNVEVTVDETVADQEAFADDPGKVGE 460
Query: 300 --VRGSQVMQGYFKNPSATKQALDEDG--------------------------WLNTGDI 331
VRG V QGY+ P AT+ A + W TGDI
Sbjct: 461 LLVRGPNVTQGYWNKPGATEGAFIDAAPGETAARSSGSGAADASGASAASSGQWFRTGDI 520
Query: 332 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 391
I P G L R K IVLSTG+NV P +E+A S ++ Q +V+G
Sbjct: 521 IHIRPD----------GYLEFRDRVKQIIVLSTGKNVAPGPIEDAFAASEIVEQAMVVGD 570
Query: 392 DQRRPGAIIVPDKEEVLMAAKRLSI 416
++ GA++VP+ + V A+ I
Sbjct: 571 GEKFIGALLVPNTDHVREWAESAGI 595
>gi|269960935|ref|ZP_06175305.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio harveyi 1DA3]
gi|269834375|gb|EEZ88464.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio harveyi 1DA3]
Length = 602
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 182/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + A + EG ++PS +
Sbjct: 280 SAIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|183602191|ref|ZP_02963559.1| probable long-chain-fatty acid CoA ligase [Bifidobacterium animalis
subsp. lactis HN019]
gi|241191423|ref|YP_002968817.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196829|ref|YP_002970384.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|384194421|ref|YP_005580167.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|384195985|ref|YP_005581730.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis V9]
gi|387821287|ref|YP_006301330.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis B420]
gi|387822973|ref|YP_006302922.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis Bi-07]
gi|423679955|ref|ZP_17654831.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BS 01]
gi|183218684|gb|EDT89327.1| probable long-chain-fatty acid CoA ligase [Bifidobacterium animalis
subsp. lactis HN019]
gi|240249815|gb|ACS46755.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251383|gb|ACS48322.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295794416|gb|ADG33951.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis V9]
gi|345283280|gb|AEN77134.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|366040954|gb|EHN17467.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BS 01]
gi|386653988|gb|AFJ17118.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis B420]
gi|386655581|gb|AFJ18710.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis Bi-07]
Length = 606
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 159/350 (45%), Gaps = 52/350 (14%)
Query: 61 RSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQ 116
R+ D VP E + L LP H + R YF F+ G+ + + L D+Q ++
Sbjct: 212 RAAADCVPEVLEGNSRLLLFLPLAHCFARFIQYFAFTSDAGVIGYLPSTKTLPHDMQVFE 271
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P ++++VP V+E +Y+ ++ T R + A++ + FA + G T QK
Sbjct: 272 PTFVLAVPRVFEKVYNAASRKAGTGWKGR-LFAKS---VEFAREWTEMEQAGIAPTPKQK 327
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
H + EKLVY I+SA G K GG L +
Sbjct: 328 AE----------------------HAMYEKLVYSTIRSAFGPRIKYLACGGAPLDRKLAT 365
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ IG+ + GYGLTE++ A R NV+G+VG P+ + ++I
Sbjct: 366 FFNGIGLTMIQGYGLTETAAPFAFTRVHDNVIGTVGQPVPGSSVRI-----------SPT 414
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G ++V+G V GY P T + EDGWL TGD+ I G + L GR
Sbjct: 415 GELEVKGQNVFLGYHNLPEKTTETFAEDGWLKTGDLASIDDE----------GHITLTGR 464
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
AKD I+ + G+NV P+ +E+ ++ VV+G ++ GA+I D+E
Sbjct: 465 AKDIIITAGGKNVSPIPMEQEISTCPIVEHAVVVGDNRPFVGAVITLDQE 514
>gi|294508414|ref|YP_003572472.1| long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
gi|294344742|emb|CBH25520.1| Long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
Length = 632
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 185/416 (44%), Gaps = 57/416 (13%)
Query: 67 VPAENGDKFLSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVP 124
+P D LS LP H +ER G+ + + G + Y ++ + +LQ QP MISVP
Sbjct: 221 IPIGEDDHHLSFLPLSHAFERTAGHTAVLAAGATISYAESIEAVSQNLQEVQPTLMISVP 280
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
++E +Y + KQ ++ + +A +R E + PS L
Sbjct: 281 RMFEKVYKRVTKQAKEGGPLKQAL------FDWAVGVGERHAE--AQQKTGSGPSLL--- 329
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
L +A +LV+ K+ +G + + SGG +LP I F++A GV
Sbjct: 330 ------------LRGQRAVAHRLVFSKLHEKLGGNLRFAASGGAALPEEIGTFFQAAGVT 377
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS--------- 294
+ GYGLTE++PV+ G+VGH + + I E NE PAG+
Sbjct: 378 IIEGYGLTETAPVLTINPLDAPRYGTVGHVMPGVTVAIQPLEENE--PAGAVSGSDYPTS 435
Query: 295 ----KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 350
+G + V+G VM+ Y+ P T+ A DGW +TGD+G R G L
Sbjct: 436 LSTPEGEILVKGPNVMKEYWNQPEETRAAFGPDGWYHTGDVG-----------RFEEGYL 484
Query: 351 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 410
+ R K IV G+NV P +EE + I QIVV+G+ + A++VP+ + + M
Sbjct: 485 KITDRIKHMIVTEGGKNVYPGPIEETFKTKNWINQIVVVGEGRPFLAALVVPNFDALRMR 544
Query: 411 AKRLSIVHA--DASELSKEKTISLLYGEL---RKWTSKCSFQIGPIHVVDEPFTVN 461
A+ I + D +EL L+ ++ + +I ++ EPFTV
Sbjct: 545 ARDEGIDESTCDDAELLHHDAAQALFQDVFTAYNRDAAAHEKIRNFRLLGEPFTVE 600
>gi|163802678|ref|ZP_02196569.1| leucine transcriptional activator [Vibrio sp. AND4]
gi|159173566|gb|EDP58386.1| leucine transcriptional activator [Vibrio sp. AND4]
Length = 602
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 184/388 (47%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + +A + EG ++PS L
Sbjct: 280 SAIHEKVARAPVHRKIILTWAVNMGAKMSACHQ--EG-------RKPSLL---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI D NE+L VRG+ VM+GY+
Sbjct: 376 TETTATVSCWDDQCFDPSSIGMAMPGAQVKIGD--NNEIL---------VRGAMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G+I + G + + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGYIDEN----------GNVFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNNLQKELAKFEQVKKFKLLP 562
>gi|150007270|ref|YP_001302013.1| long-chain-fatty-acid-CoA ligase [Parabacteroides distasonis ATCC
8503]
gi|149935694|gb|ABR42391.1| long-chain-fatty-acid-CoA ligase, putative [Parabacteroides
distasonis ATCC 8503]
Length = 633
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 184/379 (48%), Gaps = 54/379 (14%)
Query: 76 LSMLPPWHVYERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLV 126
L +LP H + G++IF S+G +++ T + LK+ +++ ++P+ ++SVP +
Sbjct: 223 LVILPLDHCFAHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPAL 282
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
+ I++ I + +RI + Y EG
Sbjct: 283 AKNFKKNIEQGIRARGKNAVRLFNLALRIGYIYNGDSDEEEG------------------ 324
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 245
+ L PL L +KL++ K++ G K + GG L + FY A+G+ +
Sbjct: 325 ----KGFRVFLKPLIRLFDKLLFTKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMY 380
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGL+E++P+I+ P +V GS G + ++KI D + N VLP G KG + +RG V
Sbjct: 381 QGYGLSEATPIISTNGPRRHVFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENV 439
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
M GY+KNP++T + E GWL TGD+G++ G+L + GR K ++ S G
Sbjct: 440 MAGYWKNPASTADTVKE-GWLYTGDMGYMRD-----------GLLYVLGRFKSLLIGSDG 487
Query: 366 ENVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---A 421
E P +EEA + SS I Q+++ A++VP+KE + R + H +
Sbjct: 488 EKYSPEGIEEALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLT 542
Query: 422 SELSKEKTISLLYGELRKW 440
S+ +E+ I ++ ++ ++
Sbjct: 543 SDQGREEAIRIIQRQIDRF 561
>gi|393782192|ref|ZP_10370381.1| hypothetical protein HMPREF1071_01249 [Bacteroides salyersiae
CL02T12C01]
gi|392674226|gb|EIY67675.1| hypothetical protein HMPREF1071_01249 [Bacteroides salyersiae
CL02T12C01]
Length = 602
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 190/407 (46%), Gaps = 55/407 (13%)
Query: 63 LYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIELMYTAVR--NLKDDLQRYQPH 118
++DI + DK +SM LP HV+E+A Y +G+++ +R +++ ++ +P
Sbjct: 211 IHDIRLVDMSDKDVSMNFLPLTHVFEKAWSYLCIHKGVQICIN-LRPVDIQMTIKEIRPT 269
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M SVP +E +Y+G+Q++I ++ ++ + IR+ +I+ R K P
Sbjct: 270 LMCSVPRFWEKVYAGVQEKIAETTGIKKALMLDAIRVG-------KIH-NIDYLRKGKTP 321
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLF 236
++ L + EK VY ++ IGI + G ++P I F
Sbjct: 322 PLMLHLKYQFY---------------EKTVYSLLKKTIGIENGNFFPTAGAAVPDEICEF 366
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
++G+ + VGYGLTES+ ++ + + +GSVG + E+KI E NE+L
Sbjct: 367 VHSVGINMLVGYGLTESTATVSCFQNSGYEIGSVGTVMPDVEVKI--GENNEIL------ 418
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+RG + +GY+K AT +A+D++GW +TGD G++ G L L R
Sbjct: 419 ---LRGKTITKGYYKKAEATAEAIDKEGWFHTGDAGYLN-----------GDCLYLTERI 464
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
KD S G+ + P LE I QI +I ++ A+IVP V AK I
Sbjct: 465 KDLFKTSNGKYISPQALETKLAIDRYIDQIAIIADQRKFVSALIVPMYGFVKDYAKEKGI 524
Query: 417 VHADASELSKE-KTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTV 460
+ D EL + K I L + + + Q+ ++ EPF++
Sbjct: 525 EYKDMEELLQHPKIIGLFRARIDTLQQQFAHYEQVKRFTLLPEPFSM 571
>gi|229524469|ref|ZP_04413874.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae bv. albensis
VL426]
gi|229338050|gb|EEO03067.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae bv. albensis
VL426]
Length = 601
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 194/428 (45%), Gaps = 60/428 (14%)
Query: 38 LFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+F+ T P M ++ Q+ + D L LP HV+ERA +
Sbjct: 180 LFTFIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAY 239
Query: 93 IFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 151
+ +G Y V ++++ L +P M +VP YE ++S I +++ + R+V+
Sbjct: 240 VLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--- 296
Query: 152 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 211
F + C + Q+QPS++ L H A+KLV K
Sbjct: 297 -----FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFADKLVLSK 335
Query: 212 IQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 270
+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++ C S+
Sbjct: 336 LRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSI 395
Query: 271 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 330
G + ++KI E NE+L VRG VM+GY+K T ++ DE G+L TGD
Sbjct: 396 GLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGD 444
Query: 331 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 390
G I + G L + R K+ + S G+ + P +E A + I QI VI
Sbjct: 445 AGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIA 494
Query: 391 QDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTS 442
++ A+IVP + + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 495 DTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNDLQKELAKFEQ 554
Query: 443 KCSFQIGP 450
F++ P
Sbjct: 555 VKKFRLLP 562
>gi|383191633|ref|YP_005201761.1| AMP-forming long-chain acyl-CoA synthetase [Rahnella aquatilis CIP
78.65 = ATCC 33071]
gi|371589891|gb|AEX53621.1| AMP-forming long-chain acyl-CoA synthetase [Rahnella aquatilis CIP
78.65 = ATCC 33071]
Length = 598
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 191/409 (46%), Gaps = 52/409 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQP 117
Q+R + D L LP HV+ERA +F+ G + ++ ++D LQ +P
Sbjct: 207 QLRQHEKRLSISEHDVSLCFLPLAHVFERAWSFFVMHCGAQNVFLRETDRVRDALQAIKP 266
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARA-LIRISFAYTAFKRIYEGFCLTRNQK 176
M +VP YE ++S I + VARA ++ + A + E F + R +
Sbjct: 267 TVMCAVPRFYEKVFSAIHDK----------VARAGTLKKRLFHWAVAQGKEKFLIERRGE 316
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 235
+ + W L P H LA+KLV KK++ +G + + + G SL ++ L
Sbjct: 317 RYPF--------W-------LTPAHFLADKLVLKKLRDLLGGNLRFLPAAGASLDDNVIL 361
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+E++G+K++ GYGLTE+ + GSVG + E++I E NE+
Sbjct: 362 FFESLGLKIKYGYGLTETCATVTCWEEHDFRFGSVGTALPEIEVRI--GEENEI------ 413
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
+VRG +++GYF P T + DGW TGD G + G V + E R
Sbjct: 414 ---QVRGPTLLRGYFNKPEETAASFTSDGWFKTGDAGKMDAQ---------GNVFITE-R 460
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
KD + S G+ + P +E ++ I Q VI ++ A+IVPD + + + A+
Sbjct: 461 LKDLMKTSGGKYIAPQRIEGTLVQDRYIEQAAVIADERHFVSALIVPDFDVLNVYAQAHH 520
Query: 416 IVHADASELSK-EKTISLLYGELRKWTSKCS--FQIGPIHVVDEPFTVN 461
I + + + L K E+ +SL +LR+ + Q+ ++ +PFT+
Sbjct: 521 IDYLNRTGLVKNEQILSLFAHQLREIQHDLAGFEQVKKFVLLTKPFTME 569
>gi|308051480|ref|YP_003915046.1| AMP-dependent synthetase and ligase [Ferrimonas balearica DSM 9799]
gi|307633670|gb|ADN77972.1| AMP-dependent synthetase and ligase [Ferrimonas balearica DSM 9799]
Length = 611
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 200/436 (45%), Gaps = 52/436 (11%)
Query: 8 LFHGYAYMSSFFSMFKVIFITLFFSRRDLPLFSFVLIDLNTWMPIPKM---TNF--QIRS 62
L H A + + S ++ RR L + + T P M TNF +R
Sbjct: 158 LHHMSALIDAEHSQYQAELEQRIADRRLDDLLTLIYTSGTTGEPKGVMLDYTNFASTVRQ 217
Query: 63 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMI 121
+P GD L+ LP HV+ER ++ ++G Y A ++D L +PH M
Sbjct: 218 HAQFLPFGVGDVSLAFLPLSHVFERGWSLYVLTQGGTNAYLADPMAVQDALAEIRPHVMC 277
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
+VP +YE +YS + +++ + A +R + F + A K+ + F Q P+
Sbjct: 278 AVPRLYEKIYSAVMEKLEQAPAHKRGL--------FMW-ALKQGLKRF--EAEQGGPAM- 325
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
+ R A LA+KLV K++ +G + +GG +L ++ F++++
Sbjct: 326 -----GAFGRAKLA-------LADKLVLSKVREKLGGRIRFMPAGGAALDPVVNQFFQSV 373
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
G+ V G+G+TE++ + A R +G+ G + ++KI G+ + V
Sbjct: 374 GLTVLCGFGMTETTASVTANRMGEIGIGTNGSALPEVQVKI-----------GANDEILV 422
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 360
+G VM+GY+ P T +A DEDGWL TGD G++ ++GR L++ R K+ +
Sbjct: 423 KGDTVMRGYYNRPQDTAEAFDEDGWLKTGDCGYL---DAQGR-------LLITDRIKELM 472
Query: 361 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 420
S G+ + P +E R L+ Q+ +I + A+IVP E + A+ + I + D
Sbjct: 473 KTSNGKYIAPQRVEGMVSRDPLVEQVAIIADARNYVSALIVPAFEALEHWAREVGIQYKD 532
Query: 421 ASELSKEKTISLLYGE 436
EL T+ + E
Sbjct: 533 KLELVNHATVKAHFEE 548
>gi|255014105|ref|ZP_05286231.1| long-chain-fatty-acid-CoA ligase, putative [Bacteroides sp. 2_1_7]
gi|410101665|ref|ZP_11296593.1| hypothetical protein HMPREF0999_00365 [Parabacteroides sp. D25]
gi|409239463|gb|EKN32247.1| hypothetical protein HMPREF0999_00365 [Parabacteroides sp. D25]
Length = 633
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 184/379 (48%), Gaps = 54/379 (14%)
Query: 76 LSMLPPWHVYERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLV 126
L +LP H + G++IF S+G +++ T + LK+ +++ ++P+ ++SVP +
Sbjct: 223 LVILPLDHCFAHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPAL 282
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
+ I++ I + +RI + Y EG
Sbjct: 283 AKNFKKNIEQGIRARGKNAARLFNLALRIGYIYNGDSDEEEG------------------ 324
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 245
+ +L PL L +KL++ K++ G K + GG L + FY A+G+ +
Sbjct: 325 ----KGFRVLLKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMY 380
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGL+E++P+I+ P + GS G + ++KI D + N VLP G KG + +RG V
Sbjct: 381 QGYGLSEATPIISTNGPRRHTFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENV 439
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
M GY+KNP++T + E GWL TGD+G++ G+L + GR K ++ S G
Sbjct: 440 MAGYWKNPASTADTVKE-GWLYTGDMGYMRD-----------GLLYVLGRFKSLLIGSDG 487
Query: 366 ENVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---A 421
E P +EEA + SS I Q+++ A++VP+KE + R + H +
Sbjct: 488 EKYSPEGIEEALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLT 542
Query: 422 SELSKEKTISLLYGELRKW 440
S+ +E+ I ++ ++ ++
Sbjct: 543 SDQGREEAIRIIQRQIDRF 561
>gi|86148106|ref|ZP_01066406.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. MED222]
gi|85834093|gb|EAQ52251.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. MED222]
Length = 602
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 186/403 (46%), Gaps = 55/403 (13%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQ 116
+Q++ + + D L LP HV+ERA +++ +G Y ++D L +
Sbjct: 205 YQLKGHDERLSLSKDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSDVK 264
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M +VP YE ++S I +++ + R+V+ + + + + EG +
Sbjct: 265 PTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQ--EG-------R 315
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 235
PS++ L H LA+KLV K+++ +G + + GG L I
Sbjct: 316 TPSFM---------------LKKSHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGR 360
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ AIG+ V++GYG+TE++ ++ C S+G + E+KI G+K
Sbjct: 361 FFHAIGINVKLGYGMTETTATVSCWDDRCFNPDSIGMSMPGAEVKI-----------GAK 409
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
+ VRG VM+GY+K P T + DE G+L TGD G + G L + R
Sbjct: 410 DEILVRGPMVMRGYYKMPEETAKTFDEHGFLKTGDAGHFDEN----------GNLFITDR 459
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K+ + S G+ + P +E A + I QI VI ++ A+IVP + + + AK L+
Sbjct: 460 IKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEVYAKELN 519
Query: 416 IVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 450
I + D EL K EK ++ L EL K+ F++ P
Sbjct: 520 IKYHDRVELVKNHQIVEMLEKRVNDLQQELAKFEQVKKFKLLP 562
>gi|424048004|ref|ZP_17785560.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
gi|408883314|gb|EKM22101.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
Length = 602
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 182/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + A + EG ++PS +
Sbjct: 280 SAIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|238760082|ref|ZP_04621232.1| long-chain-fatty-acid--CoA ligase [Yersinia aldovae ATCC 35236]
gi|238701701|gb|EEP94268.1| long-chain-fatty-acid--CoA ligase [Yersinia aldovae ATCC 35236]
Length = 599
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 177/373 (47%), Gaps = 47/373 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ G + +Y + ++ +Q +P M +VP YE ++
Sbjct: 222 DVSLCFLPLSHVFERAWSCYVMHTGAQNVYIRDTDWVRPAMQAVKPTVMCAVPRFYEKVF 281
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I ++ + RR++ R +A +R ++ CL R QK PS L L+
Sbjct: 282 SAINDKVALAKWHRRMLFR------WAVGRGERKFQ--CLQRGQK-PSLLSGLV------ 326
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
H LA++LV K+++ +G + + G L +I LF++AIGV ++ GYG+
Sbjct: 327 ---------HKLADRLVLSKLRAVLGGRVRFLPAAGARLDDNIILFFQAIGVNIKYGYGM 377
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE+ ++ GS+G P+ ++++ G++ ++VRG VM+GYF
Sbjct: 378 TETCATVSCWEENDFRFGSIGKPLPGIDVRL-----------GAENEIQVRGPIVMRGYF 426
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P T ++ +DGWL TGD G + G L + R KD + S G+ + P
Sbjct: 427 NKPQETAESFTDDGWLKTGDAGVLDAQ----------GNLFITERLKDLMKTSGGKYIAP 476
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
LE + I QI VI ++ A+IVP E + A+ +++ + EL + I
Sbjct: 477 QMLEGTLGQDRFIEQIAVIADTRKFVSALIVPCFESLEEYARSINLKYHSRLELLRHSHI 536
Query: 431 SLLYGELRKWTSK 443
L+ + K K
Sbjct: 537 VSLFEQRLKEMQK 549
>gi|322834433|ref|YP_004214460.1| AMP-dependent synthetase/ligase [Rahnella sp. Y9602]
gi|384259655|ref|YP_005403589.1| AMP-dependent synthetase/ligase [Rahnella aquatilis HX2]
gi|321169634|gb|ADW75333.1| AMP-dependent synthetase and ligase [Rahnella sp. Y9602]
gi|380755631|gb|AFE60022.1| AMP-dependent synthetase/ligase [Rahnella aquatilis HX2]
Length = 598
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 186/394 (47%), Gaps = 50/394 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +F+ G + ++ +L +D LQ +P M +VP YE ++
Sbjct: 221 DVSLCFLPLAHVFERAWSFFVMHCGAQNVFLRETDLVRDALQAIKPTVMCAVPRFYEKVF 280
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I ++ + ++ + A + E F + R ++ + +A
Sbjct: 281 SAIHDKVSRAGTLKK---------RLFHWAVGQGKEKFLIERRGERYPFWLA-------- 323
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
P H LA+KLV KK++ +G + + + G SL ++ LF+E++G+K++ GYGL
Sbjct: 324 -------PAHFLADKLVLKKLRDLLGGNLRFLPAAGASLDDNVILFFESLGLKIKYGYGL 376
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE+ + GSVG + E++I E NE ++VRG +++GYF
Sbjct: 377 TETCATVTCWEENDFRFGSVGTALPEIEVRI--GEENE---------IQVRGPTLLRGYF 425
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P T + DGW TGD G + G V + E R KD + S G+ + P
Sbjct: 426 NKPEETAASFTADGWFKTGDAGKMDAQ---------GNVFITE-RLKDLMKTSGGKYIAP 475
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKT 429
+E ++ I Q VI ++ A+IVPD + + + A+ I + + + L K E+
Sbjct: 476 QRIEGTLVQDRYIEQAAVIADERHFVSALIVPDFDVLNVYAQAHRIDYFNRAGLVKNEQI 535
Query: 430 ISLLYGELRKWTSKCS--FQIGPIHVVDEPFTVN 461
+SL +LR+ + Q+ ++ +PFT+
Sbjct: 536 LSLFAHQLREIQHDLAGFEQVKKFVLLTKPFTME 569
>gi|406576196|ref|ZP_11051861.1| long-chain-fatty-acid--CoA ligase [Janibacter hoylei PVAS-1]
gi|404554395|gb|EKA59932.1| long-chain-fatty-acid--CoA ligase [Janibacter hoylei PVAS-1]
Length = 579
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 159/336 (47%), Gaps = 48/336 (14%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G + L LP HV R+ Y G + + A ++ D L ++PH ++ VP V+E +
Sbjct: 219 GRRILIFLPMAHVLARSVAYIAAQSGATVGFWADFGSIVDKLGSFRPHMVVGVPRVFEKV 278
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
+ G++ Q ++ +RV A + A R + + +PS + L
Sbjct: 279 HDGVRSQ----ASGQRVSAVVFTKGEQVALACSR-----AIGEGEGRPSLPLRLA----- 324
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYG 249
H + ++L+Y K+++A+G V SGGG+L + F+ +GV V GYG
Sbjct: 325 ----------HAVFDRLLYTKVRAALGGEMEYVISGGGALGERLGHFFRGVGVPVHEGYG 374
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+ I P +G+VG P+ E+++ D G + VRG+ V GY
Sbjct: 375 LTETCAAITVNGPGVQRVGTVGRPLPGNEVRVAD-----------DGAISVRGAVVTDGY 423
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ N AT++A+ DGW TGD+G + G L + GRAK+ IV + G+NV
Sbjct: 424 WGNDEATREAI-VDGWFATGDLGTLDDD----------GYLTITGRAKEIIVTAGGKNVS 472
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+ L+ Q +V+G + GA+I D E
Sbjct: 473 PGPLEDVLRTHPLVSQAMVVGDGRPFVGALITLDPE 508
>gi|89890831|ref|ZP_01202340.1| Long-chain-fatty-acid--CoA ligase (synthetase) [Flavobacteria
bacterium BBFL7]
gi|89516976|gb|EAS19634.1| Long-chain-fatty-acid--CoA ligase (synthetase) [Flavobacteria
bacterium BBFL7]
Length = 596
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 176/377 (46%), Gaps = 58/377 (15%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
K LS LP H+YER Y G + + ++ + D+L+ QP M +VP + E +Y
Sbjct: 219 KALSFLPVCHIYERMLQYMYTYTGTGIYFAESIETISDNLKEIQPEVMSAVPRLLEKVYD 278
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I I +G LT +K+ + + W
Sbjct: 279 KI------------------------------IAKGTDLTGIKKKLFFWAVELGLEWEPY 308
Query: 193 ICAILWPLHLL--AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
W L A+KL++ K Q A+G + KA SG +L + + A GV V GYG
Sbjct: 309 GANGWWYEKKLGLAKKLIFSKWQEALGGNLKAIASGSAALQPRLARVFNAAGVPVMEGYG 368
Query: 250 LTESSPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
LTE+SPVI+ R +G+VG + +T+++I AE E++ + G Q M
Sbjct: 369 LTETSPVISVNDLRDGGFKIGTVGKILPNTDVQI--AEDGEII---------INGPQRMM 417
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K+P T +A+DE+G+ +TGDIG I G L + R K+ S G+
Sbjct: 418 GYYKDPEKTAEAIDENGYFHTGDIGEIDSE----------GFLKITDRKKEMFKTSGGKY 467
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SK 426
+ P +E +S I QI+VIG+ ++ P A I P+ E + A R IV+ D +L S+
Sbjct: 468 IAPQLIENTMKQSRFIEQIMVIGEGEKMPAAFIQPNFEFLADWANRKGIVYDDWKDLCSQ 527
Query: 427 EKTISLLYGELRKWTSK 443
E+ I+ E+ + +K
Sbjct: 528 ERIINRYQKEIDFYNTK 544
>gi|423304813|ref|ZP_17282812.1| hypothetical protein HMPREF1072_01752 [Bacteroides uniformis
CL03T00C23]
gi|423310073|ref|ZP_17288057.1| hypothetical protein HMPREF1073_02807 [Bacteroides uniformis
CL03T12C37]
gi|392682713|gb|EIY76055.1| hypothetical protein HMPREF1073_02807 [Bacteroides uniformis
CL03T12C37]
gi|392683477|gb|EIY76812.1| hypothetical protein HMPREF1072_01752 [Bacteroides uniformis
CL03T00C23]
Length = 601
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 179/397 (45%), Gaps = 53/397 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D ++ LP HV+E+A Y RG+++ + ++++ ++ +P M SVP +E
Sbjct: 221 DQDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPQDIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I + R+ + I++ + R K P ++ L
Sbjct: 281 VYAGVQEKISQETGLRKAMMLDAIKVGRTH--------NIDYLRQGKTPPMMLHL----- 327
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
+ EK +Y ++ IGI + G ++P I F ++G+ + VG
Sbjct: 328 ----------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMVVG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ ++ +GSVG + E+KI E NE+L +RG +
Sbjct: 378 YGLTESTATVSCFLNEGYEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITT 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K P AT A+D +GW +TGD G++ H L L R KD S G+
Sbjct: 427 GYYKKPEATAAAIDRNGWFHTGDAGYLKDSH-----------LYLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P LE I QI VI +++ A+IVP V AK I + + EL +
Sbjct: 476 ISPQALETKLAIDRYIDQIAVIADERKFVSALIVPVYGFVKDYAKEKGIAYNNMDELLQH 535
Query: 428 KTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F Q+ ++ EPF++
Sbjct: 536 SKIQALF-RARIDTLQQQFAHYEQVKRFTLLTEPFSM 571
>gi|365121016|ref|ZP_09338186.1| hypothetical protein HMPREF1033_01532 [Tannerella sp.
6_1_58FAA_CT1]
gi|363646486|gb|EHL85732.1| hypothetical protein HMPREF1033_01532 [Tannerella sp.
6_1_58FAA_CT1]
Length = 603
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 167/371 (45%), Gaps = 55/371 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD-----LQRYQPHYMISVPLVY 127
D L LP H++ERA YF +GI + V N K D ++ +P M SVP +
Sbjct: 225 DISLCFLPLTHIFERAWTYFCLVKGIRV----VINQKPDEIQSIIKEVRPTIMCSVPRFW 280
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E +Y+ +Q++I TS +R++ + T KR R +K+ + +
Sbjct: 281 EKVYTAVQEKISTSKGIQRIMMMKAVE-----TGRKR---NIDFLRLEKKVPFFLECRYR 332
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQ 245
LW +KLV KI+ AIG+ + + G L I+ F + G+ +
Sbjct: 333 LW---------------DKLVLSKIRKAIGVENGNIFPTAGAPLSDTINEFLHSCGINII 377
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGL+E++ + + G+VG + ++K+ E NE+L V+G V
Sbjct: 378 YGYGLSETTATVTCFEISGYEFGTVGTTLPGIQVKM--GEDNEIL---------VKGGTV 426
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
M+GY+K P T + +DGW TGD G + G LVL R KD STG
Sbjct: 427 MKGYYKKPEETAKVFTKDGWFKTGDAGKLNAE----------GSLVLTERIKDLFKTSTG 476
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 425
+ + P +E I Q+ VIG ++ AII+P E + A + I + + EL
Sbjct: 477 KYIAPQAIETKLGEDKYIDQVAVIGDQRKYVTAIIIPAYEALKEYAAQKQIQYRNLEELV 536
Query: 426 KEKTISLLYGE 436
K ++I L E
Sbjct: 537 KNQSIQKLIQE 547
>gi|381165792|ref|ZP_09875019.1| AMP-dependent synthetase and ligase [Phaeospirillum molischianum
DSM 120]
gi|380685282|emb|CCG39831.1| AMP-dependent synthetase and ligase [Phaeospirillum molischianum
DSM 120]
Length = 612
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 186/402 (46%), Gaps = 77/402 (19%)
Query: 75 FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP H YE G F+ S G + Y ++ +L ++ +P M +VP +Y+++
Sbjct: 231 FLSFLPLSHAYEHTAGLFLPISIGATIYYADSIEHLSANMLEVRPTIMTAVPRLYDSIRI 290
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I K + R+ + A + + +RI +G L +D L R+
Sbjct: 291 RILKGLGKVGRLRQTLFHAALSL-----GERRIAQGGRL-----------GPLDSLADRV 334
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
+ +++V KI+ G KA VSGG LP + F+ ++GV + GYG T
Sbjct: 335 L-----------DRVVRDKIRDRFGGRLKAFVSGGAPLPPEVGRFFLSLGVTILQGYGQT 383
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E++PVI+ RP + SVG I EI+I A E+L VRG VMQGY++
Sbjct: 384 EAAPVISVNRPGRVRVESVGPVIEGVEIRI--AADGEIL---------VRGEMVMQGYWQ 432
Query: 312 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 371
+P++T A+D DGWL+TGDIG I P G L + R KD IV S G+NV P
Sbjct: 433 DPASTAAAIDPDGWLHTGDIGVIDPD----------GNLRITDRKKDIIVNSGGDNVSPQ 482
Query: 372 ELEEAALRSSLIRQIVVIGQDQRRPG--AIIVPDKEEVLM----AAKRLSIVHADASELS 425
+E I Q +V G RRP A+IVPD + V A +R+ I H
Sbjct: 483 RIECLLTLQPGIAQAMVHG--DRRPHLVALIVPDPDRVQALGAPARERVVIEH------- 533
Query: 426 KEKTISLLYGELRKWTSKCSFQIGPIH------VVDEPFTVN 461
L E+ + + + P+ V+ EPF+V
Sbjct: 534 -----PRLKAEIAHAVEQVNAHLAPVERIRRFTVLAEPFSVE 570
>gi|162421030|ref|YP_001607310.1| AMP binding protein [Yersinia pestis Angola]
gi|165928221|ref|ZP_02224053.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937755|ref|ZP_02226316.1| AMP binding protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166009084|ref|ZP_02229982.1| AMP binding protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212014|ref|ZP_02238049.1| AMP binding protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167422015|ref|ZP_02313768.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426467|ref|ZP_02318220.1| AMP binding protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|270487868|ref|ZP_06204942.1| AMP-binding enzyme [Yersinia pestis KIM D27]
gi|294502628|ref|YP_003566690.1| AMP binding protein [Yersinia pestis Z176003]
gi|384121062|ref|YP_005503682.1| AMP binding protein [Yersinia pestis D106004]
gi|384124940|ref|YP_005507554.1| AMP binding protein [Yersinia pestis D182038]
gi|420577414|ref|ZP_15072171.1| AMP-binding enzyme family protein [Yersinia pestis PY-07]
gi|162353845|gb|ABX87793.1| AMP binding protein [Yersinia pestis Angola]
gi|165914167|gb|EDR32783.1| AMP binding protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165919832|gb|EDR37133.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992423|gb|EDR44724.1| AMP binding protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206760|gb|EDR51240.1| AMP binding protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960152|gb|EDR56173.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167054565|gb|EDR64373.1| AMP binding protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|262360658|gb|ACY57379.1| AMP binding protein [Yersinia pestis D106004]
gi|262364604|gb|ACY61161.1| AMP binding protein [Yersinia pestis D182038]
gi|270336372|gb|EFA47149.1| AMP-binding enzyme [Yersinia pestis KIM D27]
gi|294353087|gb|ADE63428.1| AMP binding protein [Yersinia pestis Z176003]
gi|391464203|gb|EIR22517.1| AMP-binding enzyme family protein [Yersinia pestis PY-07]
Length = 588
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 178/375 (47%), Gaps = 51/375 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN---LKDDLQRYQPHYMISVPLVYET 129
D LS LP HV+ERA +++ G + +Y +RN ++ +Q +P M +VP YE
Sbjct: 211 DVSLSFLPLSHVFERAWSFYVMHTGAQNVY--IRNTDWVRSAMQAVKPTVMCAVPRFYEK 268
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S I ++ + +RV+ + FKR+ +G L WL
Sbjct: 269 VFSAINDKVALAKWHQRVLFHWAV--GCGERKFKRLQQGRPLP--------------WLS 312
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
+ ++ LA++LV +K++ +G + + G L +I LF++AIGV ++ GY
Sbjct: 313 EQ--------MYTLADRLVLRKLRGVLGGRVRFLPAAGARLDDNIILFFQAIGVNIKYGY 364
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE+ ++ GS+G P+ ++++ G++ ++VRG VM+G
Sbjct: 365 GMTETCATVSCWEEQNFRFGSIGKPLPGIDVRL-----------GAENEIQVRGPIVMRG 413
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
YFK P T +A EDGWL TGD G + G L + R KD + S G+ +
Sbjct: 414 YFKKPQETLEAFTEDGWLKTGDAGALDAQ----------GHLFITERLKDLMKTSGGKYI 463
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I Q+ +I ++ A+IVP E + A+ +++ + D EL +
Sbjct: 464 APQMIEGTLGQDRFIEQVAIIADTRKFVSALIVPSFESLEEYARSINLKYHDRLELLRHS 523
Query: 429 TISLLYGELRKWTSK 443
I ++ + K K
Sbjct: 524 HIVNMFEQRLKEIQK 538
>gi|444424568|ref|ZP_21220024.1| hypothetical protein B878_01444 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444242274|gb|ELU53789.1| hypothetical protein B878_01444 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 602
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 182/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + A + EG ++PS +
Sbjct: 280 SAIHEKVSRAPVQRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEQYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|220936214|ref|YP_002515113.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219997524|gb|ACL74126.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 605
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 186/395 (47%), Gaps = 53/395 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H ER GY++ G + Y +++ L DDL +P +ISVP +YE +
Sbjct: 226 DLFLSFLPLSHTLERTAGYYMPMMVGAAVAYARSIQTLADDLATVRPTVLISVPRIYERV 285
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y I + S ++AR L ++ ++R +Q + W
Sbjct: 286 YGRINAGLKEKS----LLARKLF-MTTVDVGWRR------FEHSQGRAG---------WH 325
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
+ L+A K++ + G + V GG LP I F+ +G+ V GYG+
Sbjct: 326 PKLLLWPLLEKLVASKVLAR----LGGRLRYAVCGGAPLPPPIARFFIGLGLPVFHGYGM 381
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TESSPV++ RP NV S+G P+ E+KI G K + R VM GY+
Sbjct: 382 TESSPVVSVNRPDDNVPASIGKPLPGVEVKI-----------GDKDELLTRSPSVMLGYW 430
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
N AT+ +D +GWL++GD + R G L + GR K+ IVL GE V P
Sbjct: 431 NNEEATRATIDSEGWLHSGD---------KARMDETGH-LYITGRIKEIIVLGNGEKVPP 480
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---E 427
++E A L Q++VIG+ + AI+V + EE AK L + ++L+ E
Sbjct: 481 ADMEMAIALDPLFDQVMVIGEGRPALAAIVVLNPEEWAALAKELDLDPESEADLNGRFLE 540
Query: 428 KTI-SLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
KT+ + + +L ++ Q+ + V EP+TV+
Sbjct: 541 KTLRTRIARQLHEFPGYA--QVRKLIVTLEPWTVD 573
>gi|443293070|ref|ZP_21032164.1| Non-ribosomal peptide synthetase, AMP-dependent synthetase and
ligase [Micromonospora lupini str. Lupac 08]
gi|385882928|emb|CCH20315.1| Non-ribosomal peptide synthetase, AMP-dependent synthetase and
ligase [Micromonospora lupini str. Lupac 08]
Length = 604
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 156/336 (46%), Gaps = 49/336 (14%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G L LP H + R + L + +NL +LQ ++P +++SVP V+E +
Sbjct: 227 GAATLLFLPLAHAFARLIQIGVVQARATLAHCPDTKNLVGELQEFRPTFVLSVPRVFEKV 286
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ KQ + V ARA +++ AY+ G L
Sbjct: 287 YNA-AKQKAEADGKGGVFARAE-QVAIAYSEALETPRGPGLA------------------ 326
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
L H + ++LVY+K+++A+G + +SGG L + F+ +GV V GYG
Sbjct: 327 ------LRAQHAVFDRLVYRKLRAALGGRCRDAISGGAPLGARLGHFFRGVGVTVLEGYG 380
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+SP AA PT +G+VG P+ ++I D G + + G V QGY
Sbjct: 381 LTETSPAAAANLPTGTRIGTVGRPLPGVTVRIED-----------DGEILISGDLVFQGY 429
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ N +AT +AL DGW TGD+G + G L + GR K+ IV + G+NV
Sbjct: 430 WHNEAATAEALSADGWFRTGDLGQL----------DADGYLSITGRKKELIVTAGGKNVA 479
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+ LI Q VV+G + A++ D+E
Sbjct: 480 PAVLEDQVRAHPLISQCVVVGDAKPFIAALVTIDEE 515
>gi|336325229|ref|YP_004605195.1| acyl-CoA synthetase [Corynebacterium resistens DSM 45100]
gi|336101211|gb|AEI09031.1| acyl-CoA synthetase [Corynebacterium resistens DSM 45100]
Length = 610
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 166/338 (49%), Gaps = 47/338 (13%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 130
G + L+ LP HV+ RA G ++ ++ + +L +R +P+ +++VP ++E +
Sbjct: 230 GYRVLTFLPLAHVFARAISLACVVGGATQIHWSDMGSLVTQFERSKPNLIVAVPRIFEKV 289
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
++G + + + A+ ++ + R + N + PS
Sbjct: 290 HAGAKAKAVDGGGLK---AKIFLQAEKVAVEYSRALD------NPEGPS----------- 329
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
A L + +KLVY K++ A+G + +SGG + + F+ IGV++ GYG
Sbjct: 330 ----AALKAQRAVFDKLVYSKVREAMGGKLEYAISGGSACNPELLHFFRGIGVRIFEGYG 385
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTES+ IA N++G+VG P+ I+I D G + ++G+ V GY
Sbjct: 386 LTESTAAIAVNFDPDNIIGTVGRPMGGNTIRIDD-----------DGEITIKGTVVFDGY 434
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
++N ATK++ EDG+ TGD+G + P G L + GR K+ IV + G+NV
Sbjct: 435 WRNEEATKESFTEDGFYRTGDLGRLLPS----------GHLKITGRKKEIIVTAGGKNVS 484
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
P +E+ + LI Q +V+G DQ+ GA+I D+E V
Sbjct: 485 PGPMEDILRSAPLISQAMVVGDDQKFVGALISLDEEAV 522
>gi|260775231|ref|ZP_05884129.1| long-chain-fatty-acid--CoA ligase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608932|gb|EEX35094.1| long-chain-fatty-acid--CoA ligase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 602
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 178/388 (45%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ RG Y +++ L QP M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYRGATNCYLQDTMQVREALSEVQPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ + + A + EG +QPS
Sbjct: 280 SAIHEKVSKAPMIRKVLFTWAVNMGAKMAACDQ--EG-------RQPSL----------- 319
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
IL H LA+KLV K+++ +G + GG L I F+ A+G+ V++GYG+
Sbjct: 320 ----ILKKSHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAMGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWSDNSFNPDSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + DE G+L TGD G I G L + R K+ + S G+ + P
Sbjct: 425 KMPEETAKTFDEHGFLKTGDAGHIDED----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQQELAKFEQVKKFKLLP 562
>gi|213963544|ref|ZP_03391797.1| long-chain-fatty-acid--CoA ligase homolog [Capnocytophaga sputigena
Capno]
gi|213953824|gb|EEB65153.1| long-chain-fatty-acid--CoA ligase homolog [Capnocytophaga sputigena
Capno]
Length = 599
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 185/374 (49%), Gaps = 48/374 (12%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYE 128
+N D L+ LP HV+ERA +F + + + Y NL ++ L + +P M +VP YE
Sbjct: 220 DNTDISLAFLPLSHVFERAWTFFCLYKAVTVYYLDDTNLVREALAQVRPTLMCAVPRFYE 279
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+++ + + SS V R L R++ A +R+ L K+PS
Sbjct: 280 KIFATVHDKADASS----FVKRKLFRLAIA--TGRRV---LNLREQGKKPSL-------- 322
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
L + L +KLVYKK++ A+G K GG +L I F+++IG+ +++G
Sbjct: 323 -------ALQKAYNLFDKLVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLG 375
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE+ I+ SVG + + +++I E NE+L V+G VM+
Sbjct: 376 YGMTETVATISCWGDNRINPQSVGEVMPNVQVRI--GEDNEIL---------VKGGMVMK 424
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+KNP T + DG+L TGD G + ++S L + R K+ + S G+
Sbjct: 425 GYYKNPEETAKVFTPDGYLRTGDAGKLDGNNS----------LFITERIKELMKTSNGKY 474
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + +LI QI V+ ++ A+IVP+ E + A K L+I + + ++L K
Sbjct: 475 IAPQMIEGKVGKYNLIEQIAVVADGKKFVSALIVPNFEMLSQALKDLNIKYKNTADLIKH 534
Query: 428 -KTISLLYGELRKW 440
+ I + +L+K+
Sbjct: 535 SQVIEYIGKQLQKF 548
>gi|270295471|ref|ZP_06201672.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274718|gb|EFA20579.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 601
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 178/395 (45%), Gaps = 53/395 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D ++ LP HV+E+A Y RG+++ + ++++ ++ +P M SVP +E +Y
Sbjct: 223 DVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPQDIQTTIKEIRPTLMCSVPRFWEKVY 282
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+G+Q++I + R+ + I++ + R K P ++ L
Sbjct: 283 AGVQEKISQETGLRKAMMLDAIKVGRTH--------NIDYLRQGKTPPMMLHL------- 327
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYG 249
+ EK +Y ++ IGI + G ++P I F ++G+ + VGYG
Sbjct: 328 --------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMVVGYG 379
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTES+ ++ +GSVG + E+KI E NE+L +RG + GY
Sbjct: 380 LTESTATVSCFLNEGYEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITTGY 428
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+K P AT A+D +GW +TGD G++ H L L R KD S G+ +
Sbjct: 429 YKKPEATAAAIDRNGWFHTGDAGYLKDSH-----------LYLTERIKDLFKTSNGKYIS 477
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 429
P LE I QI VI +++ A+IVP V AK I + + EL +
Sbjct: 478 PQALETKLAIDRYIDQIAVIADERKFVSALIVPVYGFVKDYAKEKGIAYNNMDELLQHSK 537
Query: 430 ISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F Q+ ++ EPF++
Sbjct: 538 IQALF-RARIDTLQQQFAHYEQVKRFTLLTEPFSM 571
>gi|329123150|ref|ZP_08251720.1| long-chain-fatty-acid--CoA ligase [Haemophilus aegyptius ATCC
11116]
gi|327471705|gb|EGF17147.1| long-chain-fatty-acid--CoA ligase [Haemophilus aegyptius ATCC
11116]
Length = 607
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 168/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 225 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 284
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + Y F L N K +L
Sbjct: 285 IYAAVLDKVQKAPKLRQIMFHWAISVGQKY---------FDLRANNKAIPFL-------- 327
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 328 -------LKKLFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 380
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + ++KI E NE+L VRG VM+G
Sbjct: 381 GMTETTATVSCWHDFQFNPNSIGTLMPKAKVKI--GENNEIL---------VRGGMVMKG 429
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 430 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 479
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 480 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 539
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 540 DILKMFEQ 547
>gi|153949544|ref|YP_001402359.1| AMP binding protein [Yersinia pseudotuberculosis IP 31758]
gi|170025747|ref|YP_001722252.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
YPIII]
gi|152961039|gb|ABS48500.1| AMP binding protein [Yersinia pseudotuberculosis IP 31758]
gi|169752281|gb|ACA69799.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
YPIII]
Length = 601
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 178/375 (47%), Gaps = 51/375 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN---LKDDLQRYQPHYMISVPLVYET 129
D LS LP HV+ERA +++ G + +Y +RN ++ +Q +P M +VP YE
Sbjct: 224 DVSLSFLPLSHVFERAWSFYVMHTGAQNVY--IRNTDWVRSAMQAVKPTVMCAVPRFYEK 281
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S I ++ + +RV+ + FKR+ +G L WL
Sbjct: 282 VFSAINDKVALAKWHQRVLFHWAV--GCGERKFKRLQQGRPLP--------------WLS 325
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
+ ++ LA++LV +K++ +G + + G L +I LF++AIGV ++ GY
Sbjct: 326 EQ--------MYTLADRLVLRKLRGVLGGRVRFLPAAGARLDDNIILFFQAIGVNIKYGY 377
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE+ ++ GS+G P+ ++++ G++ ++VRG VM+G
Sbjct: 378 GMTETCATVSCWEEQNFRFGSIGKPLPGIDVRL-----------GAENEIQVRGPIVMRG 426
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
YFK P T +A EDGWL TGD G + G L + R KD + S G+ +
Sbjct: 427 YFKKPQETLEAFTEDGWLKTGDAGALDAQ----------GHLFITERLKDLMKTSGGKYI 476
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I Q+ +I ++ A+IVP E + A+ +++ + D EL +
Sbjct: 477 APQMIEGTLGQDRFIEQVAIIADTRKFVSALIVPSFESLEEYARSINLKYHDRLELLRHS 536
Query: 429 TISLLYGELRKWTSK 443
I ++ + K K
Sbjct: 537 HIVNMFEQRLKEIQK 551
>gi|22127515|ref|NP_670938.1| fatty acid biosynthesis protein [Yersinia pestis KIM10+]
gi|45443377|ref|NP_994916.1| AMP-binding protein [Yersinia pestis biovar Microtus str. 91001]
gi|51595024|ref|YP_069215.1| AMP-binding protein [Yersinia pseudotuberculosis IP 32953]
gi|108809552|ref|YP_653468.1| AMP-binding protein [Yersinia pestis Antiqua]
gi|108810571|ref|YP_646338.1| AMP-binding enzyme-family protein [Yersinia pestis Nepal516]
gi|145600359|ref|YP_001164435.1| AMP-binding enzyme-family protein [Yersinia pestis Pestoides F]
gi|150260427|ref|ZP_01917155.1| putative AMP-binding enzyme-family protein [Yersinia pestis
CA88-4125]
gi|167401298|ref|ZP_02306798.1| AMP binding protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167469510|ref|ZP_02334214.1| AMP-binding enzyme-family protein [Yersinia pestis FV-1]
gi|186894030|ref|YP_001871142.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
PB1/+]
gi|218927734|ref|YP_002345609.1| AMP-binding protein [Yersinia pestis CO92]
gi|229837070|ref|ZP_04457235.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Pestoides A]
gi|229840427|ref|ZP_04460586.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843031|ref|ZP_04463181.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229900762|ref|ZP_04515886.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Nepal516]
gi|384137474|ref|YP_005520176.1| putative AMP-binding enzyme family protein [Yersinia pestis A1122]
gi|384416401|ref|YP_005625763.1| AMP-binding protein [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420545020|ref|ZP_15043194.1| AMP-binding enzyme family protein [Yersinia pestis PY-01]
gi|420550334|ref|ZP_15047944.1| AMP-binding enzyme family protein [Yersinia pestis PY-02]
gi|420555787|ref|ZP_15052795.1| AMP-binding enzyme family protein [Yersinia pestis PY-03]
gi|420561464|ref|ZP_15057743.1| AMP-binding enzyme family protein [Yersinia pestis PY-04]
gi|420566471|ref|ZP_15062259.1| AMP-binding enzyme family protein [Yersinia pestis PY-05]
gi|420572138|ref|ZP_15067409.1| AMP-binding enzyme family protein [Yersinia pestis PY-06]
gi|420582818|ref|ZP_15077101.1| AMP-binding enzyme family protein [Yersinia pestis PY-08]
gi|420587923|ref|ZP_15081705.1| AMP-binding enzyme family protein [Yersinia pestis PY-09]
gi|420593235|ref|ZP_15086488.1| AMP-binding enzyme family protein [Yersinia pestis PY-10]
gi|420598921|ref|ZP_15091580.1| AMP-binding enzyme family protein [Yersinia pestis PY-11]
gi|420604497|ref|ZP_15096554.1| AMP-binding enzyme family protein [Yersinia pestis PY-12]
gi|420609782|ref|ZP_15101353.1| AMP-binding enzyme family protein [Yersinia pestis PY-13]
gi|420615044|ref|ZP_15106032.1| AMP-binding enzyme family protein [Yersinia pestis PY-14]
gi|420620500|ref|ZP_15110796.1| AMP-binding enzyme family protein [Yersinia pestis PY-15]
gi|420625532|ref|ZP_15115359.1| AMP-binding enzyme family protein [Yersinia pestis PY-16]
gi|420630690|ref|ZP_15120043.1| AMP-binding enzyme family protein [Yersinia pestis PY-19]
gi|420635875|ref|ZP_15124675.1| AMP-binding enzyme family protein [Yersinia pestis PY-25]
gi|420641460|ref|ZP_15129713.1| AMP-binding enzyme family protein [Yersinia pestis PY-29]
gi|420646547|ref|ZP_15134377.1| AMP-binding enzyme family protein [Yersinia pestis PY-32]
gi|420652230|ref|ZP_15139474.1| AMP-binding enzyme family protein [Yersinia pestis PY-34]
gi|420657678|ref|ZP_15144390.1| AMP-binding enzyme family protein [Yersinia pestis PY-36]
gi|420663015|ref|ZP_15149150.1| AMP-binding enzyme family protein [Yersinia pestis PY-42]
gi|420668037|ref|ZP_15153693.1| AMP-binding enzyme family protein [Yersinia pestis PY-45]
gi|420673306|ref|ZP_15158487.1| AMP-binding enzyme family protein [Yersinia pestis PY-46]
gi|420678810|ref|ZP_15163495.1| AMP-binding enzyme family protein [Yersinia pestis PY-47]
gi|420684045|ref|ZP_15168199.1| AMP-binding enzyme family protein [Yersinia pestis PY-48]
gi|420689220|ref|ZP_15172794.1| AMP-binding enzyme family protein [Yersinia pestis PY-52]
gi|420695043|ref|ZP_15177883.1| AMP-binding enzyme family protein [Yersinia pestis PY-53]
gi|420700318|ref|ZP_15182477.1| AMP-binding enzyme family protein [Yersinia pestis PY-54]
gi|420706458|ref|ZP_15187366.1| AMP-binding enzyme family protein [Yersinia pestis PY-55]
gi|420711740|ref|ZP_15192153.1| AMP-binding enzyme family protein [Yersinia pestis PY-56]
gi|420717110|ref|ZP_15196904.1| AMP-binding enzyme family protein [Yersinia pestis PY-58]
gi|420722753|ref|ZP_15201715.1| AMP-binding enzyme family protein [Yersinia pestis PY-59]
gi|420728388|ref|ZP_15206728.1| AMP-binding enzyme family protein [Yersinia pestis PY-60]
gi|420733504|ref|ZP_15211337.1| AMP-binding enzyme family protein [Yersinia pestis PY-61]
gi|420738945|ref|ZP_15216250.1| AMP-binding enzyme family protein [Yersinia pestis PY-63]
gi|420744173|ref|ZP_15220912.1| AMP-binding enzyme family protein [Yersinia pestis PY-64]
gi|420750096|ref|ZP_15225911.1| AMP-binding enzyme family protein [Yersinia pestis PY-65]
gi|420755178|ref|ZP_15230426.1| AMP-binding enzyme family protein [Yersinia pestis PY-66]
gi|420761232|ref|ZP_15235264.1| AMP-binding enzyme family protein [Yersinia pestis PY-71]
gi|420766406|ref|ZP_15239947.1| AMP-binding enzyme family protein [Yersinia pestis PY-72]
gi|420771448|ref|ZP_15244459.1| AMP-binding enzyme family protein [Yersinia pestis PY-76]
gi|420776756|ref|ZP_15249244.1| AMP-binding enzyme family protein [Yersinia pestis PY-88]
gi|420782266|ref|ZP_15254076.1| AMP-binding enzyme family protein [Yersinia pestis PY-89]
gi|420787696|ref|ZP_15258841.1| AMP-binding enzyme family protein [Yersinia pestis PY-90]
gi|420793160|ref|ZP_15263766.1| AMP-binding enzyme family protein [Yersinia pestis PY-91]
gi|420798314|ref|ZP_15268393.1| AMP-binding enzyme family protein [Yersinia pestis PY-92]
gi|420803697|ref|ZP_15273239.1| AMP-binding enzyme family protein [Yersinia pestis PY-93]
gi|420808871|ref|ZP_15277923.1| AMP-binding enzyme family protein [Yersinia pestis PY-94]
gi|420814663|ref|ZP_15283110.1| AMP-binding enzyme family protein [Yersinia pestis PY-95]
gi|420819812|ref|ZP_15287780.1| AMP-binding enzyme family protein [Yersinia pestis PY-96]
gi|420824891|ref|ZP_15292321.1| AMP-binding enzyme family protein [Yersinia pestis PY-98]
gi|420830684|ref|ZP_15297549.1| AMP-binding enzyme family protein [Yersinia pestis PY-99]
gi|420835490|ref|ZP_15301881.1| AMP-binding enzyme family protein [Yersinia pestis PY-100]
gi|420840652|ref|ZP_15306562.1| AMP-binding enzyme family protein [Yersinia pestis PY-101]
gi|420846242|ref|ZP_15311620.1| AMP-binding enzyme family protein [Yersinia pestis PY-102]
gi|420851582|ref|ZP_15316374.1| AMP-binding enzyme family protein [Yersinia pestis PY-103]
gi|420857161|ref|ZP_15321079.1| AMP-binding enzyme family protein [Yersinia pestis PY-113]
gi|421761966|ref|ZP_16198766.1| AMP-binding protein [Yersinia pestis INS]
gi|21960614|gb|AAM87189.1|AE013966_6 putative fatty acid biosynthesis protein [Yersinia pestis KIM10+]
gi|45438246|gb|AAS63793.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Microtus str. 91001]
gi|51588306|emb|CAH19914.1| putative AMP-binding enzyme-family protein [Yersinia
pseudotuberculosis IP 32953]
gi|108774219|gb|ABG16738.1| AMP-binding enzyme-family protein [Yersinia pestis Nepal516]
gi|108781465|gb|ABG15523.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Antiqua]
gi|115346345|emb|CAL19217.1| putative AMP-binding enzyme-family protein [Yersinia pestis CO92]
gi|145212055|gb|ABP41462.1| AMP-binding enzyme-family protein [Yersinia pestis Pestoides F]
gi|149289835|gb|EDM39912.1| putative AMP-binding enzyme-family protein [Yersinia pestis
CA88-4125]
gi|167049323|gb|EDR60731.1| AMP binding protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|186697056|gb|ACC87685.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
PB1/+]
gi|229682101|gb|EEO78193.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Nepal516]
gi|229689907|gb|EEO81966.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696793|gb|EEO86840.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706013|gb|EEO92022.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Pestoides A]
gi|320016905|gb|ADW00477.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342852603|gb|AEL71156.1| putative AMP-binding enzyme family protein [Yersinia pestis A1122]
gi|391432113|gb|EIQ93589.1| AMP-binding enzyme family protein [Yersinia pestis PY-01]
gi|391433167|gb|EIQ94530.1| AMP-binding enzyme family protein [Yersinia pestis PY-02]
gi|391435766|gb|EIQ96791.1| AMP-binding enzyme family protein [Yersinia pestis PY-03]
gi|391448197|gb|EIR08035.1| AMP-binding enzyme family protein [Yersinia pestis PY-04]
gi|391448895|gb|EIR08667.1| AMP-binding enzyme family protein [Yersinia pestis PY-05]
gi|391451533|gb|EIR11019.1| AMP-binding enzyme family protein [Yersinia pestis PY-06]
gi|391465843|gb|EIR23991.1| AMP-binding enzyme family protein [Yersinia pestis PY-08]
gi|391467875|gb|EIR25809.1| AMP-binding enzyme family protein [Yersinia pestis PY-09]
gi|391481271|gb|EIR37826.1| AMP-binding enzyme family protein [Yersinia pestis PY-10]
gi|391482068|gb|EIR38548.1| AMP-binding enzyme family protein [Yersinia pestis PY-12]
gi|391482202|gb|EIR38664.1| AMP-binding enzyme family protein [Yersinia pestis PY-11]
gi|391496452|gb|EIR51400.1| AMP-binding enzyme family protein [Yersinia pestis PY-13]
gi|391496986|gb|EIR51887.1| AMP-binding enzyme family protein [Yersinia pestis PY-15]
gi|391500587|gb|EIR55077.1| AMP-binding enzyme family protein [Yersinia pestis PY-14]
gi|391512101|gb|EIR65445.1| AMP-binding enzyme family protein [Yersinia pestis PY-16]
gi|391513827|gb|EIR67003.1| AMP-binding enzyme family protein [Yersinia pestis PY-19]
gi|391515786|gb|EIR68742.1| AMP-binding enzyme family protein [Yersinia pestis PY-25]
gi|391527621|gb|EIR79521.1| AMP-binding enzyme family protein [Yersinia pestis PY-29]
gi|391530383|gb|EIR81965.1| AMP-binding enzyme family protein [Yersinia pestis PY-34]
gi|391531818|gb|EIR83278.1| AMP-binding enzyme family protein [Yersinia pestis PY-32]
gi|391544753|gb|EIR94930.1| AMP-binding enzyme family protein [Yersinia pestis PY-36]
gi|391546312|gb|EIR96317.1| AMP-binding enzyme family protein [Yersinia pestis PY-42]
gi|391547089|gb|EIR97021.1| AMP-binding enzyme family protein [Yersinia pestis PY-45]
gi|391560924|gb|EIS09511.1| AMP-binding enzyme family protein [Yersinia pestis PY-46]
gi|391562030|gb|EIS10489.1| AMP-binding enzyme family protein [Yersinia pestis PY-47]
gi|391564074|gb|EIS12318.1| AMP-binding enzyme family protein [Yersinia pestis PY-48]
gi|391576223|gb|EIS22813.1| AMP-binding enzyme family protein [Yersinia pestis PY-52]
gi|391576897|gb|EIS23389.1| AMP-binding enzyme family protein [Yersinia pestis PY-53]
gi|391588442|gb|EIS33471.1| AMP-binding enzyme family protein [Yersinia pestis PY-55]
gi|391591017|gb|EIS35651.1| AMP-binding enzyme family protein [Yersinia pestis PY-54]
gi|391592228|gb|EIS36684.1| AMP-binding enzyme family protein [Yersinia pestis PY-56]
gi|391605408|gb|EIS48299.1| AMP-binding enzyme family protein [Yersinia pestis PY-60]
gi|391606856|gb|EIS49534.1| AMP-binding enzyme family protein [Yersinia pestis PY-58]
gi|391607670|gb|EIS50245.1| AMP-binding enzyme family protein [Yersinia pestis PY-59]
gi|391619729|gb|EIS60965.1| AMP-binding enzyme family protein [Yersinia pestis PY-61]
gi|391620669|gb|EIS61801.1| AMP-binding enzyme family protein [Yersinia pestis PY-63]
gi|391628887|gb|EIS68892.1| AMP-binding enzyme family protein [Yersinia pestis PY-64]
gi|391631216|gb|EIS70875.1| AMP-binding enzyme family protein [Yersinia pestis PY-65]
gi|391642571|gb|EIS80829.1| AMP-binding enzyme family protein [Yersinia pestis PY-71]
gi|391645313|gb|EIS83204.1| AMP-binding enzyme family protein [Yersinia pestis PY-72]
gi|391647623|gb|EIS85234.1| AMP-binding enzyme family protein [Yersinia pestis PY-66]
gi|391655007|gb|EIS91790.1| AMP-binding enzyme family protein [Yersinia pestis PY-76]
gi|391661827|gb|EIS97834.1| AMP-binding enzyme family protein [Yersinia pestis PY-88]
gi|391666695|gb|EIT02118.1| AMP-binding enzyme family protein [Yersinia pestis PY-89]
gi|391668514|gb|EIT03741.1| AMP-binding enzyme family protein [Yersinia pestis PY-90]
gi|391672685|gb|EIT07473.1| AMP-binding enzyme family protein [Yersinia pestis PY-91]
gi|391686125|gb|EIT19587.1| AMP-binding enzyme family protein [Yersinia pestis PY-93]
gi|391687645|gb|EIT20934.1| AMP-binding enzyme family protein [Yersinia pestis PY-92]
gi|391688868|gb|EIT22051.1| AMP-binding enzyme family protein [Yersinia pestis PY-94]
gi|391700243|gb|EIT32355.1| AMP-binding enzyme family protein [Yersinia pestis PY-95]
gi|391703587|gb|EIT35324.1| AMP-binding enzyme family protein [Yersinia pestis PY-96]
gi|391704373|gb|EIT36037.1| AMP-binding enzyme family protein [Yersinia pestis PY-98]
gi|391714573|gb|EIT45215.1| AMP-binding enzyme family protein [Yersinia pestis PY-99]
gi|391719942|gb|EIT50005.1| AMP-binding enzyme family protein [Yersinia pestis PY-100]
gi|391720466|gb|EIT50486.1| AMP-binding enzyme family protein [Yersinia pestis PY-101]
gi|391731130|gb|EIT59870.1| AMP-binding enzyme family protein [Yersinia pestis PY-102]
gi|391733565|gb|EIT61929.1| AMP-binding enzyme family protein [Yersinia pestis PY-103]
gi|391737148|gb|EIT65062.1| AMP-binding enzyme family protein [Yersinia pestis PY-113]
gi|411178288|gb|EKS48300.1| AMP-binding protein [Yersinia pestis INS]
Length = 601
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 178/375 (47%), Gaps = 51/375 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN---LKDDLQRYQPHYMISVPLVYET 129
D LS LP HV+ERA +++ G + +Y +RN ++ +Q +P M +VP YE
Sbjct: 224 DVSLSFLPLSHVFERAWSFYVMHTGAQNVY--IRNTDWVRSAMQAVKPTVMCAVPRFYEK 281
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S I ++ + +RV+ + FKR+ +G L WL
Sbjct: 282 VFSAINDKVALAKWHQRVLFHWAV--GCGERKFKRLQQGRPLP--------------WLS 325
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
+ ++ LA++LV +K++ +G + + G L +I LF++AIGV ++ GY
Sbjct: 326 EQ--------MYTLADRLVLRKLRGVLGGRVRFLPAAGARLDDNIILFFQAIGVNIKYGY 377
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE+ ++ GS+G P+ ++++ G++ ++VRG VM+G
Sbjct: 378 GMTETCATVSCWEEQNFRFGSIGKPLPGIDVRL-----------GAENEIQVRGPIVMRG 426
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
YFK P T +A EDGWL TGD G + G L + R KD + S G+ +
Sbjct: 427 YFKKPQETLEAFTEDGWLKTGDAGALDAQ----------GHLFITERLKDLMKTSGGKYI 476
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I Q+ +I ++ A+IVP E + A+ +++ + D EL +
Sbjct: 477 APQMIEGTLGQDRFIEQVAIIADTRKFVSALIVPSFESLEEYARSINLKYHDRLELLRHS 536
Query: 429 TISLLYGELRKWTSK 443
I ++ + K K
Sbjct: 537 HIVNMFEQRLKEIQK 551
>gi|448330677|ref|ZP_21519956.1| AMP-dependent synthetase and ligase [Natrinema versiforme JCM
10478]
gi|445611181|gb|ELY64941.1| AMP-dependent synthetase and ligase [Natrinema versiforme JCM
10478]
Length = 652
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 165/351 (47%), Gaps = 49/351 (13%)
Query: 76 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
+S LP HV+ER G+F+ F+ G + Y + L++D +P SVP VYE +Y
Sbjct: 262 MSYLPLAHVFERTAGHFVLFASGACVAYAESPDTLQEDFSLVEPTTATSVPRVYEKIYDS 321
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I+++ S+ + R+ A +++ A
Sbjct: 322 IREEASGSAVSERIFEWATD-----------------------------VGVEYQLADSP 352
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
IL +A+KLV+ ++ A+G +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 353 GPILSAKQAVADKLVFSSVREALGGEIDLLISGGGSLSPELCRLYHAMGLPIFEGYGLTE 412
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK---VRGSQVMQGY 309
+SPV++ +G++G P+ + ++K+ + ++ A G V V G V +GY
Sbjct: 413 TSPVVSTNPQDAVKVGTIGPPLANVDVKVDETVADQEAFADDPGEVGELLVNGPNVTEGY 472
Query: 310 FKNPSATKQALD--EDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
+ P AT+ A EDG W TGDI + P G L R K IVLSTG
Sbjct: 473 WNRPGATRGAFTEAEDGTQWFRTGDIIHLRPD----------GYLEFRDRLKQIIVLSTG 522
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
+NV P LE+A S ++ Q +V+G ++ GA++VP+ V A I
Sbjct: 523 KNVAPGPLEDAFAASEIVEQAMVVGDGEKFIGALLVPNTNHVRTWADEEGI 573
>gi|423332199|ref|ZP_17309983.1| hypothetical protein HMPREF1075_01996 [Parabacteroides distasonis
CL03T12C09]
gi|409229322|gb|EKN22199.1| hypothetical protein HMPREF1075_01996 [Parabacteroides distasonis
CL03T12C09]
Length = 633
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 186/381 (48%), Gaps = 54/381 (14%)
Query: 74 KFLSMLPPWHVYERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVP 124
+ L +LP H + G++IF S+G +++ T + LK+ +++ ++P ++SVP
Sbjct: 221 RTLVILPLDHCFAHVVGFYIFMSKGASVATVQVGRTGMETLKNIPVNIKEFKPDLILSVP 280
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+ + I++ I + +RI + Y EG
Sbjct: 281 ALAKNFKKNIEQGIRARGKNAVRLFNLALRIGYIYNGDSDEEEGKGF------------- 327
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
RI +L PL L +KL++ K++ G K + GG L + FY A+G+
Sbjct: 328 ------RI---LLKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIP 378
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
+ GYGL+E++P+I+ P +V GS G + ++KI D + N VLP G KG + +RG
Sbjct: 379 MYQGYGLSEATPIISTNGPRRHVFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGE 437
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM GY+KNP++T + E GWL TGD+G++ G+L + GR K ++ S
Sbjct: 438 NVMAGYWKNPASTADTVKE-GWLYTGDMGYMRD-----------GLLYVLGRFKSLLIGS 485
Query: 364 TGENVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-- 420
GE P +EEA + SS I Q+++ A++VP+KE + R + H +
Sbjct: 486 DGEKYSPEGIEEALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLD 540
Query: 421 -ASELSKEKTISLLYGELRKW 440
S+ +E+ I ++ ++ ++
Sbjct: 541 LTSDQGREEAIRIIQRQIDRF 561
>gi|119946244|ref|YP_943924.1| AMP-dependent synthetase and ligase [Psychromonas ingrahamii 37]
gi|119864848|gb|ABM04325.1| AMP-dependent synthetase and ligase [Psychromonas ingrahamii 37]
Length = 592
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 172/352 (48%), Gaps = 57/352 (16%)
Query: 59 QIRSLYDIVPAENG-DKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQ 116
QIR+ + P + DK L+ LP HV+ER YF S G + + ++ + + L++ Q
Sbjct: 203 QIRATTQLFPLHSAKDKALTCLPLAHVFERMVIYFYISTGTPIFFADDIKKVGELLRQVQ 262
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + VP + E +Y+ + R+ ++ I+ +AF+R K
Sbjct: 263 PSVITLVPRLLEKVYAKMHA---------RIEEQSTIKKKLMSSAFERAI--------SK 305
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+P L+D ++ +KL+Y K++ A+G + + +SGG +L + ++
Sbjct: 306 EPG-AHNLLDKIY---------------DKLIYSKLREALGGNLQMVISGGAALSVSMEN 349
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F++ IG+ + GYGLTE+SPV+AA P SVG EIKI D + E+L
Sbjct: 350 FFKNIGLNLYQGYGLTETSPVLAANYPGNTRYRSVGKIWPGVEIKISDQQ--EIL----- 402
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
+G +M+GY +P T++ +D GWL+TGD+G++ G L + GR
Sbjct: 403 ----AKGPNIMKGYHNDPQTTRETIDPQGWLHTGDLGFVDQD----------GYLFINGR 448
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
K+ S G+ V P+ +E+ S LI ++G+++ ++ PD E +
Sbjct: 449 KKEIFKTSNGKYVSPIPIEQMLCVSELIDMAAIMGENKNFVSCLLFPDFENL 500
>gi|319774953|ref|YP_004137441.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae F3047]
gi|317449544|emb|CBY85748.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
F3047]
Length = 599
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 168/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + Y F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKY---------FDLRANNKAIPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 320 -------LKKLFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + ++KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLMPKAKVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 532 DILKMFEQ 539
>gi|254488381|ref|ZP_05101586.1| AMP-dependent synthetase and ligase [Roseobacter sp. GAI101]
gi|214045250|gb|EEB85888.1| AMP-dependent synthetase and ligase [Roseobacter sp. GAI101]
Length = 651
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 191/408 (46%), Gaps = 51/408 (12%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIE--LMYTAVRNLKDDLQRY 115
+ ++ + +P D FLS+LP H +ER Y + G + ++ L+ DL
Sbjct: 253 WNAEAVTEFIPPLTSDIFLSLLPLAHSFERTATYHMAMMGGSRVVFARSIDTLRQDLLEV 312
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
+P +++VP +YE + +Q + S RR++ +A + + F+ +G
Sbjct: 313 RPTILVAVPRLYERICEAVQSKAAHSPITRRLLGQA---ATIGWQHFE-ARQG-----RA 363
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
K P + L+ +WP+ E+LV + + A G + + VSGG L +
Sbjct: 364 KPPGAITRLL-----------VWPM---LERLVARPVLRAFGGNVRVAVSGGAPLSLEAS 409
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARR-PTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 293
F +G+ + GYGLTE++PV+ A CN GS G P+ EI++ G
Sbjct: 410 HFLIGLGLPLVEGYGLTEAAPVVTATTLKDCNP-GSAGRPLRGIEIRL-----------G 457
Query: 294 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 353
S G + V+ +M GY+ +P + A+D+DGWL+TGD IA H+ G L +
Sbjct: 458 SDGELLVKSPSLMSGYWHDPERSAAAIDQDGWLHTGD---IAEFHA--------GRLFIT 506
Query: 354 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
GR KD IVLSTG+ V +E A + L Q VIG ++ AI+V ++ + AK+
Sbjct: 507 GRLKDLIVLSTGKKVVSATVEAAVVADPLFEQCCVIGDNRSCIVAIVVLCQDRWEVFAKQ 566
Query: 414 LSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 461
+ AD + + + E + + QI +H V P+TV
Sbjct: 567 HHLDPADPNMPTAAAALLTRVTEAMRDPPPFA-QIRAVHAVLLPWTVE 613
>gi|448356428|ref|ZP_21545161.1| AMP-dependent synthetase and ligase [Natrialba chahannaoensis JCM
10990]
gi|445653461|gb|ELZ06332.1| AMP-dependent synthetase and ligase [Natrialba chahannaoensis JCM
10990]
Length = 671
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 174/386 (45%), Gaps = 76/386 (19%)
Query: 59 QIRSLYDIVPAENGD--------KFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-L 108
QIR + P + D + +S LP HV+ER G+F+ F+ G + Y + L
Sbjct: 237 QIRKRFAPRPDRDDDVPVIDSESQAMSYLPLAHVFERTAGHFLLFASGACVAYAENPDTL 296
Query: 109 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 168
++D QP+ SVP VYE +Y I++Q SS +R+ A
Sbjct: 297 QEDFSTVQPNTATSVPRVYEKIYDAIREQASESSVKKRIFEWATD--------------- 341
Query: 169 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 227
+++ A IL LA+KLV+ ++ A+G + +SGGG
Sbjct: 342 --------------VGVEYQQADSPGPILNAKRALADKLVFSTVREALGGEIEILISGGG 387
Query: 228 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA--E 285
SL + Y A+G+ + GYGLTE+SPV+A P +G++G + +I I ++ +
Sbjct: 388 SLSPELCRLYHAMGLPIFEGYGLTETSPVVAVNPPEEPKIGTIGPTVVDADISIDESVVD 447
Query: 286 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE----------------------- 322
+ G+ G + RG V QGY+ P+AT +A E
Sbjct: 448 QDAFDDPGAVGELLTRGPNVTQGYWNKPAATDRAFTEATQSDGSTTLTDSPEDVNEDEDA 507
Query: 323 -DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 381
D W TGD+ + R G + R K +VLSTG+NV P +E+A S
Sbjct: 508 DDQWFRTGDVVHL----------RDDGYIEFRDRVKQLLVLSTGKNVAPGPIEDAFAASE 557
Query: 382 LIRQIVVIGQDQRRPGAIIVPDKEEV 407
++ Q +V+G ++ GA++VP+ E +
Sbjct: 558 VVEQAMVVGDGEKFIGALLVPNIEHI 583
>gi|393786196|ref|ZP_10374332.1| hypothetical protein HMPREF1068_00612 [Bacteroides nordii
CL02T12C05]
gi|392659825|gb|EIY53442.1| hypothetical protein HMPREF1068_00612 [Bacteroides nordii
CL02T12C05]
Length = 601
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 185/408 (45%), Gaps = 55/408 (13%)
Query: 63 LYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHY 119
++DI + D+ +SM LP HV+E+A Y +G+++ +++ ++ +P
Sbjct: 211 IHDIRLVDMTDEDVSMNFLPLTHVFEKAWSYLCIYKGVQICVNLRPADIQMTIKEIRPTL 270
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
M SVP +E +Y+G+Q++I ++ ++ + IR+ RI+ R K P
Sbjct: 271 MCSVPRFWEKVYAGVQEKIAETTGIKKTLMMDAIRVG-------RIH-NIDYIRQGKTPP 322
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFY 237
++ L + EK +Y ++ IGI + G ++P I F
Sbjct: 323 LMLHL---------------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEICEFV 367
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
++G+ + VGYGLTES+ ++ T +GSVG + E+KI E NE+L
Sbjct: 368 HSVGIDMLVGYGLTESTATVSCTSKTGYDIGSVGQVMPDVEVKI--GEDNEIL------- 418
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
+RG + +GY+K AT +D DGW +TGD G+ G L L R K
Sbjct: 419 --LRGKTITKGYYKKAEATAATIDADGWFHTGDAGYFK-----------NGQLYLTERIK 465
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
D S G+ + P LE + I QI +I ++ A+IVP V AK I
Sbjct: 466 DLFKTSNGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKDYAKEKGIE 525
Query: 418 HADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTVN 461
+ D EL + I L+ R T + F QI ++ EPF++
Sbjct: 526 YKDMEELLQHPKIVGLF-RARIDTLQQQFANYEQIKRFTLLPEPFSME 572
>gi|448316041|ref|ZP_21505679.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
gi|445610387|gb|ELY64161.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
Length = 660
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 176/374 (47%), Gaps = 55/374 (14%)
Query: 59 QIRSLYDIVPAENGD--------KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNL 108
QIR Y P ++ + + +S LP HV+ER G+F+ F+ G + Y + L
Sbjct: 237 QIRKRYGPRPDKDDELPVIDETVQSVSYLPLAHVFERTAGHFLLFASGACIAYAESTDTL 296
Query: 109 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 168
K+D QP SVP VYE +Y I++Q S A +R+ A
Sbjct: 297 KEDFGTVQPDTATSVPRVYEKIYDTIREQASESGAKKRIFEWATD--------------- 341
Query: 169 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 227
R Q+ A +L LA++LV+ ++ A+G + +SGGG
Sbjct: 342 -VGVRYQR-------------ADDPGPVLGAKQSLADRLVFSSVREALGGEIELLISGGG 387
Query: 228 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 287
SL + Y A+G+ + GYGLTE++PV++ P +G++G + ++++ ++ T
Sbjct: 388 SLSKELCTLYHAMGLPIYEGYGLTETAPVVSVNPPEEPRIGTIGPSLPGVDVRVDESVTG 447
Query: 288 EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDE-DG--WLNTGDIGWIAPHHSRGR 342
E A G G + V G V +GY+ P AT ++ E DG W TGDI + P
Sbjct: 448 EETFADPGEVGELLVSGPNVAEGYWNKPGATAESFFEADGSRWFRTGDIVHLRPDD---- 503
Query: 343 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 402
+ R K +VLSTG+NV P +E+A S ++ Q +V+G ++ GA++VP
Sbjct: 504 ------YIEFRDRVKQILVLSTGKNVAPGPIEDAFAASEVVEQCLVVGDGEKFVGALLVP 557
Query: 403 DKEEVLMAAKRLSI 416
+ + + A I
Sbjct: 558 NTDHIREWADERGI 571
>gi|339501423|ref|YP_004699458.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
gi|338835772|gb|AEJ20950.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
Length = 641
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 180/367 (49%), Gaps = 51/367 (13%)
Query: 57 NFQIRSLYDI----VPAENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYTA------- 104
N+ I SL + VP E G + +LP H + + G + RGIEL +
Sbjct: 209 NYYINSLDSVNIFKVP-ETGYRNFVILPVDHSFAQTVGIHASIQRGIELWFVDSRGGGMA 267
Query: 105 -VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 163
+RN+ +++ +P ++++VP + +Q +I + + I+ +Y
Sbjct: 268 ILRNIPINMKEAEPVFLMTVPALSGNFMKKMQAEIDKRGGIIKFLFDTGIKAGISYWG-- 325
Query: 164 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG- 222
+G RN K ++L AL+ +PL +KLV K+++ + +A
Sbjct: 326 ---DGSFPERNLK--TFLNALV-----------YFPL----KKLVLDKVKTEVFGKRAQF 365
Query: 223 -VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 281
GG S + FY A+G+ + GYG+TE+SPVI+ LG+ G ++H EI+I
Sbjct: 366 FTGGGASFDIGQQRFYRALGMPLYQGYGMTEASPVISTNIEGHTKLGTSGIALDHVEIRI 425
Query: 282 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
+ + P G KG + VRG VM+GYFKNP AT++ L DGWL+TGD+GW+
Sbjct: 426 IRDDGTFAEP-GEKGEICVRGPNVMKGYFKNPEATRETL-VDGWLHTGDLGWLDKD---- 479
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS-LIRQIVVIGQDQRRPGAII 400
G L + GRAK ++ + GE P +EEA S+ ++ Q++V +R A+I
Sbjct: 480 ------GYLTVAGRAKALLISADGEKYSPEGIEEAIANSAKVVNQVMVWNDHKRFTCALI 533
Query: 401 VPDKEEV 407
+ E+V
Sbjct: 534 TLEDEQV 540
>gi|326335848|ref|ZP_08202027.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691992|gb|EGD33952.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 600
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 184/405 (45%), Gaps = 63/405 (15%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQP 117
I++ + VP + GD LS LP H++ER Y GI L + + + ++ +P
Sbjct: 207 NIKNCHARVPVKAGDVCLSFLPVCHIFERMLTYLYQYNGIRLYFAESFDKVALNISEVKP 266
Query: 118 HYMISVPLVYETLYSGI-QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
H + VP V E +Y I K + S A+ + AL ++ + Y + +
Sbjct: 267 HLITVVPRVVEKVYDNIYNKGVALSGIAKSLFFWAL-KLGYQYKPYGK------------ 313
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLF 236
+ W + I A KL++ K + A+G + + G +L +
Sbjct: 314 ---------NGWWYGLKLKI-------ARKLIFSKWKKALGGNLQMICGSAALQPRLVRV 357
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNV--LGSVGHPINHTEIKIVDAETNEVLPAGS 294
+ A G+ + GYGLTE+SPVI+ N+ +G++G PI++ E+KI AE E+L
Sbjct: 358 FSAAGIPIWEGYGLTETSPVISVNCKKGNLWKIGTIGKPIDNIEVKI--AEDGEIL---- 411
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+GS VM GYFKN T +D++G+ +TGDIG++ G L +
Sbjct: 412 -----CKGSNVMLGYFKNEEQTHNTIDKEGFFHTGDIGFLDED----------GYLTITD 456
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R K+ S G+ + P +E +S I Q +V+G+ ++ PGA + PD + KR
Sbjct: 457 RKKEMFKTSGGKYIAPQYIENKLKQSRFIEQAMVVGEGEKMPGAFLQPDFSFIREWLKRH 516
Query: 415 -SIVHADASELSKEK--------TISLLYGELRKWTSKCSFQIGP 450
+ + +EL K+K I + +L KW F + P
Sbjct: 517 GNTQNFSNAELVKDKRVRERIAQEIEHINKKLGKWEQVKVFDLTP 561
>gi|388600371|ref|ZP_10158767.1| hypothetical protein VcamD_10774 [Vibrio campbellii DS40M4]
Length = 602
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 183/388 (47%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + A + EG ++PS +
Sbjct: 280 SAIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E+NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDQCFDPSSIGMAMPGVQVKI--GESNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|301310729|ref|ZP_07216668.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 20_3]
gi|423336979|ref|ZP_17314726.1| hypothetical protein HMPREF1059_00678 [Parabacteroides distasonis
CL09T03C24]
gi|300832303|gb|EFK62934.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 20_3]
gi|409239161|gb|EKN31947.1| hypothetical protein HMPREF1059_00678 [Parabacteroides distasonis
CL09T03C24]
Length = 633
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 185/381 (48%), Gaps = 54/381 (14%)
Query: 74 KFLSMLPPWHVYERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVP 124
+ L +LP H + G++IF S+G +++ T + LK+ +++ ++P+ ++SVP
Sbjct: 221 RTLVILPLDHCFAHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVP 280
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+ + I++ I + +RI + Y EG
Sbjct: 281 ALAKNFKKNIEQGIRARGKNAVRLFNLALRIGYIYNGDSDEEEG---------------- 324
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
+ +L PL L +KL++ K++ G K + GG L + FY A+G+
Sbjct: 325 ------KGFRVLLKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIP 378
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
+ GYGL+E++P+I+ P + GS G + ++KI D + N VLP G KG + +RG
Sbjct: 379 MYQGYGLSEATPIISTNGPRRHTFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGE 437
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM GY+KNP++T + E GWL TGD+G++ G+L + GR K ++ S
Sbjct: 438 NVMAGYWKNPASTADTVKE-GWLYTGDMGYMRD-----------GLLYVLGRFKSLLIGS 485
Query: 364 TGENVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-- 420
GE P +EEA + SS I Q+++ A++VP+KE + R + H +
Sbjct: 486 DGEKYSPEGIEEALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLD 540
Query: 421 -ASELSKEKTISLLYGELRKW 440
S+ +E+ I ++ ++ ++
Sbjct: 541 LTSDQGREEAIRIIQRQIDRF 561
>gi|256839560|ref|ZP_05545069.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738490|gb|EEU51815.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 633
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 183/379 (48%), Gaps = 54/379 (14%)
Query: 76 LSMLPPWHVYERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLV 126
L +LP H + G++IF S+G +++ T + LK+ +++ ++P+ ++SVP +
Sbjct: 223 LVILPLDHCFAHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPAL 282
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
+ I++ I + +RI + Y EG
Sbjct: 283 AKNFKKNIEQGIRAQGKNAVRLFNLALRIGYIYNGDSDEEEG------------------ 324
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 245
+ L PL L +KL++ K++ G K + GG L + FY A+G+ +
Sbjct: 325 ----KGFRVFLKPLIRLFDKLLFTKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMY 380
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGL+E++P+I+ P + GS G + ++KI D + N VLP G KG + +RG V
Sbjct: 381 QGYGLSEATPIISTNGPRRHTFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENV 439
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
M GY+KNP++T + E GWL TGD+G++ G+L + GR K ++ S G
Sbjct: 440 MAGYWKNPASTADTVKE-GWLYTGDMGYMRD-----------GLLYVLGRFKSLLIGSDG 487
Query: 366 ENVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---A 421
E P +EEA + SS I Q+++ A++VP+KE + R + H +
Sbjct: 488 EKYSPEGIEEALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLT 542
Query: 422 SELSKEKTISLLYGELRKW 440
S+ +E+ I ++ ++ ++
Sbjct: 543 SDQGREEAIRIIQRQIDRF 561
>gi|340794017|ref|YP_004759480.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
gi|340533927|gb|AEK36407.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
Length = 607
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 173/361 (47%), Gaps = 48/361 (13%)
Query: 69 AENGDKFLSMLPPWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 127
A G++ L+ LP HV RA + ++ + L + R QPH ++ VP V+
Sbjct: 224 AVEGNRALTFLPLAHVLSRAVSLASTLGGATQSHWSEMATLVPEFARAQPHLILGVPRVF 283
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E +++G++ + + + + Y+ +G P
Sbjct: 284 EKVHAGVKSKAVDGGGIGAKIFPLAEKTAVEYSKALDTKQG---------PG-------- 326
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
A+L + +KLVY K+++A+G S + +SGG +L + F+ IGV++
Sbjct: 327 -------ALLKAKRAVFDKLVYGKVRAAMGGSLQYCISGGSALNSELMHFFRGIGVRIYE 379
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYG+TE++ IA N++G+VG P+ ++I AE E+L ++G+ V
Sbjct: 380 GYGMTETTAAIAVNFEPDNIIGTVGKPVGGNTVRI--AEDGEIL---------MKGTVVF 428
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY+ N ATK D DG+L +GD+G + P G L + GR K+ IV + G+
Sbjct: 429 DGYWNNEEATKDTFDGDGFLRSGDLGALLPT----------GHLKITGRKKEIIVTAGGK 478
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELS 425
NV P LE+ + LI Q +V+G DQ+ G++I D++ + KR ++ H EL+
Sbjct: 479 NVSPGPLEDILRSAPLISQAMVVGDDQKFIGSLITLDEDALPAWKKRNNVPEHTGVLELA 538
Query: 426 K 426
K
Sbjct: 539 K 539
>gi|365876500|ref|ZP_09416021.1| amp-dependent synthetase and ligase [Elizabethkingia anophelis Ag1]
gi|442586511|ref|ZP_21005339.1| Long-chain acyl-CoA synthetases (AMP-forming) [Elizabethkingia
anophelis R26]
gi|365755812|gb|EHM97730.1| amp-dependent synthetase and ligase [Elizabethkingia anophelis Ag1]
gi|442563735|gb|ELR80942.1| Long-chain acyl-CoA synthetases (AMP-forming) [Elizabethkingia
anophelis R26]
Length = 588
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 178/389 (45%), Gaps = 64/389 (16%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
K LS LP HV+ER Y G + + ++ + D+L+ +P +M VP + E +Y
Sbjct: 219 KCLSFLPLCHVFERMLLYLYQHNGYSIYFAESIDKVGDNLKEVKPQFMTVVPRLVEKVYD 278
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
+I+ + A+ + + + + + E + L ++ + + W+
Sbjct: 279 ----KIYNTGASAGGMKTKIFLWALS------LVEDYELGKS-------MGIKGWI---- 317
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
A+KLV+ K + +G + A VSG +L ++ + G+ + GYGLT
Sbjct: 318 -----------ADKLVFSKWREGLGGNIVALVSGSAALSPRLNRIFHGAGIPILEGYGLT 366
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E+SPVIA G+VG PI + E+KI AE E+L V+G+ V +GY+
Sbjct: 367 ETSPVIAVNSFKHRKFGTVGWPIENAEVKI--AEDGEIL---------VKGTSVFKGYYM 415
Query: 312 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 371
+ TK+A EDG+ TGDIG+I G L + R K+ S G+ + P
Sbjct: 416 DEEKTKEAFTEDGYFKTGDIGFIDDE----------GFLKITDRKKEMFKTSGGKYIAPQ 465
Query: 372 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL------SIVHADASELS 425
+E A S I QI+VIG ++ P A I PD E V A+R S A+E
Sbjct: 466 VIENNAKASKFIEQIMVIGDGEKMPAAFIQPDFEFVKAWAERKGLNIGSSYAEIAANEDV 525
Query: 426 KEK---TISLLYGELRKWTSKCSFQIGPI 451
K++ I L L KW F++ PI
Sbjct: 526 KQRIAQEIEALNKHLGKWEQIKKFELTPI 554
>gi|84393678|ref|ZP_00992428.1| putative long-chain-fatty-acid-CoA ligase [Vibrio splendidus 12B01]
gi|84375677|gb|EAP92574.1| putative long-chain-fatty-acid-CoA ligase [Vibrio splendidus 12B01]
Length = 602
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 185/403 (45%), Gaps = 55/403 (13%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQ 116
+Q++ + + D L LP HV+ERA +++ +G Y ++D L +
Sbjct: 205 YQLKGHDERLSLSKDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSDVK 264
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M +VP YE ++S I +++ + R+V+ + + + + EG +
Sbjct: 265 PTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQ--EG-------R 315
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 235
PS++ L H LA+KLV K+++ +G + + GG L I
Sbjct: 316 TPSFM---------------LKKSHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGR 360
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ AIG+ V++GYG+TE++ ++ C S+G + E+KI G+K
Sbjct: 361 FFHAIGINVKLGYGMTETTATVSCWDDRCFNPDSIGMSMPGAEVKI-----------GAK 409
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
+ VRG VM+GY+K P T + DE G+L TGD G + G L + R
Sbjct: 410 DEILVRGPMVMRGYYKMPEETAKTFDEHGFLKTGDAGHFDEN----------GNLFITDR 459
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK L+
Sbjct: 460 IKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELN 519
Query: 416 IVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 450
I + D EL K EK ++ L EL K+ F++ P
Sbjct: 520 IKYHDRVELVKHHQIVEMLEKRVNDLQQELAKFEQVKKFKLLP 562
>gi|271964208|ref|YP_003338404.1| long-chain-fatty-acid--CoA ligase [Streptosporangium roseum DSM
43021]
gi|270507383|gb|ACZ85661.1| putative long-chain-fatty-acid--CoA ligase [Streptosporangium
roseum DSM 43021]
Length = 597
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 157/336 (46%), Gaps = 50/336 (14%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G L LP HV+ R + G L +T ++N+ DLQ ++P +++ VP V+E +
Sbjct: 223 GRAALLFLPLAHVFARMIQLVLIETGTVLAHTPNMKNVAPDLQAFKPTFLLGVPRVFEKV 282
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+G +++ ++ A A I+++ ++ P + L
Sbjct: 283 YNGAEQKAAGDGKSKIFHAAADTAIAWSRA------------QSAGGPGLGLRL------ 324
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
H L +KLVY K+++A G A VSGG +L + F+ +G++V G+G
Sbjct: 325 ---------RHTLFDKLVYGKLRAATGGRLSAAVSGGSALGERLAHFFRGVGIEVFEGWG 375
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+S A P N +G+VG P I I G G V V+G V GY
Sbjct: 376 LTETSAPSAVNMPGANKIGTVGKPFPGVTIGI-----------GDDGEVLVKGRHVFAGY 424
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ + AT +A+D DGW +TGD+G + G L + GR K+ +V + G+NV
Sbjct: 425 WNDDKATGEAIDADGWFHTGDVGELDKD----------GYLRITGRKKEILVTAAGKNVA 474
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P +E+ LI Q +V+G D+ AII D E
Sbjct: 475 PAPMEDLIRAHPLISQAMVVGDDRPFVAAIITLDPE 510
>gi|189459973|ref|ZP_03008758.1| hypothetical protein BACCOP_00607 [Bacteroides coprocola DSM 17136]
gi|189433346|gb|EDV02331.1| AMP-binding enzyme [Bacteroides coprocola DSM 17136]
Length = 601
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 187/396 (47%), Gaps = 55/396 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR--NLKDDLQRYQPHYMISVPLVYETL 130
D ++ LP H++ERA Y+ ++G L+ +R +++ ++ +P M SVP +E +
Sbjct: 223 DVVMNFLPFTHIFERAWSYYCINKGC-LLCINLRPQDIQKTIKEIRPTAMCSVPRFWEKV 281
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+G+Q++I ++ ++ + +++ + N K P L+ +
Sbjct: 282 YAGVQEKINETTGLKKSLMLDALKVGKEHN--------ITYLMNGKTPPPLLHM------ 327
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGY 248
+ EK +Y ++ IGI + G ++P ++ F ++G+ + GY
Sbjct: 328 ---------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAIPRAVEEFVHSVGINMIAGY 378
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTE++ ++ +GSVG + + EIKI E NE+L +RG + +G
Sbjct: 379 GLTETTATVSCCWFDSFRIGSVGRVMPNLEIKI--GENNEIL---------LRGETITKG 427
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y++ + T+Q L EDGW +TGD G+I G L L R KD S G+ +
Sbjct: 428 YYRKEAMTRQVLTEDGWFHTGDAGYIED-----------GFLFLTERIKDLFKTSNGKYI 476
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP+ +V A+ I + D +L +++
Sbjct: 477 APQAIETKLVVDRYIDQISIIADQRKFVSALIVPEYGQVKKYAEEHHIAYTDMKDLLQKQ 536
Query: 429 TISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ LR T + F QI ++ EPF++
Sbjct: 537 EILDLF-RLRIDTLQQEFAHYEQIKRFTLLPEPFSM 571
>gi|418462127|ref|ZP_13033184.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
azurea SZMC 14600]
gi|359737763|gb|EHK86686.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
azurea SZMC 14600]
Length = 598
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 159/336 (47%), Gaps = 51/336 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G+ L LP H+ RA + + L +TA ++ L +DL ++P ++++VP V+E +
Sbjct: 223 GNSLLLFLPLAHILARAIAITAITSRVTLGHTADIKELLNDLGTFRPTFVVAVPRVFEKV 282
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+G + + T + + A + + + PS+ + +
Sbjct: 283 YNGAKLKAHTGGKGK------------IFDAAEATAVAYSQALDTGGPSFGLRM------ 324
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
H + KLVY K+Q+A+G A VSGG L + F+ IGV V GYG
Sbjct: 325 ---------KHAVFSKLVYSKLQAALGGRCVAAVSGGAPLGARLAHFFRGIGVPVFEGYG 375
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+S +G+VG P+ T ++I AE EVL ++G V Y
Sbjct: 376 LTETSAAANVNTQDAFKVGTVGRPVAGTSVRI--AEDGEVL---------LKGDVVFTRY 424
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ NP AT+++L EDGW +TGDIG + G L + GR K+ IV + G+NV
Sbjct: 425 WNNPEATRESL-EDGWFHTGDIGEL----------DADGFLKITGRKKEIIVTAGGKNVA 473
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+ LI Q +V+G + GA++ D+E
Sbjct: 474 PSGLEDTLKADPLISQAMVVGDQRPFIGALVTIDEE 509
>gi|153834232|ref|ZP_01986899.1| AMP-binding family protein [Vibrio harveyi HY01]
gi|148869420|gb|EDL68426.1| AMP-binding family protein [Vibrio harveyi HY01]
Length = 602
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 182/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + A + EG ++PS +
Sbjct: 280 SAIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|74318615|ref|YP_316355.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC
25259]
gi|74058110|gb|AAZ98550.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC
25259]
Length = 602
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 167/361 (46%), Gaps = 47/361 (13%)
Query: 75 FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP H ER GY++ G E+ Y ++ L DLQ +P +ISVP +YE +Y
Sbjct: 225 FLSFLPLSHTLERTGGYYLAMLLGAEVAYARSIAQLAQDLQAIRPTVLISVPRIYERVYG 284
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
IQ + A ARAL R++ + ++R R+Q + W
Sbjct: 285 RIQDGLEKKGAP----ARALFRLAV-HVGWRR------FERSQGRA---------YWHPE 324
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
+ L+A + Q G + +SGG +L + + +GV V GYGLTE
Sbjct: 325 LLLWPLLERLVARNVT----QKLGGRLRLAISGGAALSPEVARVFIGLGVPVYQGYGLTE 380
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 312
+SPV+ RP N ++G P+ E++I D +E+L R VM+GY+K+
Sbjct: 381 TSPVVCVNRPDSNSPATIGQPLPGVEVRIGD--NDELL---------TRSRCVMRGYWKD 429
Query: 313 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 372
+AT+ +D DGWL++GD + G + GR KD IVL+ GE V P +
Sbjct: 430 EAATRAMIDADGWLHSGDQARV----------DADGHYTIIGRIKDIIVLNNGEKVPPTD 479
Query: 373 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISL 432
+E A L L Q++V+G+ + A+ V ++ A L + A + L K
Sbjct: 480 MESAILLDPLFEQVMVVGEGRPYLAALTVLNEAHWEAFAASLHLDPAQPATLRDPKVTRA 539
Query: 433 L 433
L
Sbjct: 540 L 540
>gi|148827162|ref|YP_001291915.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittGG]
gi|148718404|gb|ABQ99531.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittGG]
Length = 599
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 168/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L + I LF+ AIG+ +++GY
Sbjct: 320 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLELAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 532 DILKMFEQ 539
>gi|120600799|ref|YP_965373.1| AMP-dependent synthetase and ligase [Shewanella sp. W3-18-1]
gi|120560892|gb|ABM26819.1| AMP-dependent synthetase and ligase [Shewanella sp. W3-18-1]
Length = 598
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 173/361 (47%), Gaps = 58/361 (16%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYET 129
+GD L+ LP HV+ER+ +++ RG +Y + +K+ + +PH + VP E
Sbjct: 220 SGDVSLAFLPLSHVFERSWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEK 279
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+YS +Q ++ S +R+ + +R+ +R +E Q++ + WL
Sbjct: 280 VYSAVQDKVAKSPESRKKMFAWAMRVG------ERQFEA-----GQRRAKGSL----WL- 323
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
++ W LA KLVY K+Q+ +G K GG +L +++ F+ AIG+ V GY
Sbjct: 324 -----SLQWQ---LANKLVYSKLQAVLGGRLKFMPCGGAALDLNVGSFFHAIGIPVLCGY 375
Query: 249 GLTESSPVIAARRPTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
G+TE++ + TCN L GS G P+ TEIK+ + +E+L VRG+
Sbjct: 376 GMTETNATV-----TCNTLDNRVPGSNGQPLLETEIKL--GKDDEIL---------VRGA 419
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM+GY+ P T A EDGWL TGD G + G L + R K+ + S
Sbjct: 420 TVMRGYYNRPEDTAAAF-EDGWLKTGDAGRFDAN----------GNLFITDRIKELMKTS 468
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
G+ + P +E R I Q+ +I + A+IVP E + AK + + + E
Sbjct: 469 NGKYIAPQRVEGTVGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYESSLE 528
Query: 424 L 424
L
Sbjct: 529 L 529
>gi|365837168|ref|ZP_09378548.1| AMP-binding enzyme [Hafnia alvei ATCC 51873]
gi|364562746|gb|EHM40580.1| AMP-binding enzyme [Hafnia alvei ATCC 51873]
Length = 600
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 197/435 (45%), Gaps = 57/435 (13%)
Query: 38 LFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T P M N+ Q+R + + D L LP HV+ERA ++
Sbjct: 182 LFTLIYTSGTTGEPKGVMLNYTNMGAQLRLHDERLTVTADDVSLCFLPLSHVFERAWSFY 241
Query: 93 IFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 151
+ G + +Y + N +++ +Q +P M +VP YE ++S I +++ + +R + +
Sbjct: 242 VMHSGAQNVYLSDTNQVREAMQSVKPTVMCAVPRFYEKIFSAIHEKVAQAKWHKRAMFKC 301
Query: 152 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 211
I + KR F R +P+ +L +H LA+KLV K
Sbjct: 302 AI-----WVGEKR----FLTERAGCKPN---------------VVLSAMHKLADKLVLSK 337
Query: 212 IQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 270
++ +G + + G L ++ LF++A+G ++ GYG+TE+ ++ GS+
Sbjct: 338 LRGILGGRVRFLPAAGAKLDDNVILFFQALGANIKYGYGMTETCATVSCWEENDFRFGSI 397
Query: 271 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 330
G P+ E++I G + ++VRG VM GY+ P T EDGWL TGD
Sbjct: 398 GKPLPDVEVRI-----------GQENEIQVRGPIVMCGYYNKPLETAATFTEDGWLKTGD 446
Query: 331 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 390
G + + G L + R KD + S G+ + P +E + I Q+ VI
Sbjct: 447 AGALDEN----------GNLFITERLKDLMKTSNGKYIAPQMVEGTLAQDRFIEQVAVIA 496
Query: 391 QDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----ELRKWTSKCSF 446
++ A+IVP E + AK +++ + D +L + I ++ E++K +K
Sbjct: 497 DARKFVSALIVPCFESLEEYAKSINLKYHDRLDLLRHSHIVEMFDQRLREMQKGLAKFE- 555
Query: 447 QIGPIHVVDEPFTVN 461
Q+ ++ E F++
Sbjct: 556 QVKRFTLLPEAFSME 570
>gi|386315854|ref|YP_006012019.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
gi|319428479|gb|ADV56553.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
Length = 598
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 173/361 (47%), Gaps = 58/361 (16%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYET 129
+GD L+ LP HV+ER+ +++ RG +Y + +K+ + +PH + VP E
Sbjct: 220 SGDVSLAFLPLSHVFERSWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEK 279
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+YS +Q ++ S +R+ + +R+ +R +E Q++ + WL
Sbjct: 280 VYSAVQDKVAKSPESRKKMFAWAMRVG------ERQFEA-----GQRRAKGSL----WL- 323
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
++ W LA KLVY K+Q+ +G K GG +L +++ F+ AIG+ V GY
Sbjct: 324 -----SLQWQ---LANKLVYSKLQAVLGGRLKFMPCGGAALDLNVGSFFHAIGIPVLCGY 375
Query: 249 GLTESSPVIAARRPTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
G+TE++ + TCN L GS G P+ TEIK+ + +E+L VRG+
Sbjct: 376 GMTETNATV-----TCNTLDNRVPGSNGQPLLETEIKL--GKDDEIL---------VRGA 419
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM+GY+ P T A EDGWL TGD G + G L + R K+ + S
Sbjct: 420 TVMRGYYNRPEDTAAAF-EDGWLKTGDAGRFDAN----------GNLFITDRIKELMKTS 468
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
G+ + P +E R I Q+ +I + A+IVP E + AK + + + E
Sbjct: 469 NGKYIAPQRVEGTVGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYESSLE 528
Query: 424 L 424
L
Sbjct: 529 L 529
>gi|218708425|ref|YP_002416046.1| long-chain-fatty-acid--CoA ligase [Vibrio splendidus LGP32]
gi|218321444|emb|CAV17396.1| Long-chain-fatty-acid--CoA ligase [Vibrio splendidus LGP32]
Length = 602
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 185/403 (45%), Gaps = 55/403 (13%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQ 116
+Q++ + + D L LP HV+ERA +++ +G Y ++D L +
Sbjct: 205 YQLKGHDERLSLSKDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSDVK 264
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M +VP YE ++S I +++ + R+V+ + + + + EG +
Sbjct: 265 PTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQ--EG-------R 315
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 235
PS++ L H LA+KLV K+++ +G + + GG L I
Sbjct: 316 TPSFM---------------LKKSHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGR 360
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ AIG+ V++GYG+TE++ ++ C S+G + E+KI G+K
Sbjct: 361 FFHAIGINVKLGYGMTETTATVSCWDDRCFNPDSIGMSMPGAEVKI-----------GAK 409
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
+ VRG VM+GY+K P T + DE G+L TGD G + G L + R
Sbjct: 410 DEILVRGPMVMRGYYKMPEETAKTFDEHGFLKTGDAGHFDEN----------GNLFITDR 459
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK L+
Sbjct: 460 IKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELN 519
Query: 416 IVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 450
I + D EL K EK ++ L EL K+ F++ P
Sbjct: 520 IKYHDRVELVKNHQIVEMLEKRVNDLQQELAKFEQVKKFKLLP 562
>gi|42524534|ref|NP_969914.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus HD100]
gi|39576743|emb|CAE80907.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus HD100]
Length = 593
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 183/401 (45%), Gaps = 56/401 (13%)
Query: 55 MTNFQ----IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLK 109
MT+ Q + + + A D LS LP H+ R + G L + ++ ++
Sbjct: 197 MTHLQAISEVSEAFPLCGATEADTSLSFLPYAHILGRIEHWGHAYIGFTLAFAESLEKIR 256
Query: 110 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 169
+L +P +MISVP ++E +Y+ + QI T +V AL I +K
Sbjct: 257 GNLTEVRPTFMISVPRIFEKIYAAVIAQIQTQPLKMKVFNWAL-EIGTKVGEYK------ 309
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
+ +++ L + LA+KLV KI +A G + +SGG
Sbjct: 310 ------------------MSGQVLPLDLLVKYELAKKLVLDKIPTAFGGRLRFAISGGAP 351
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
+P I LF+ A G+ + GYGLTE++ + P GSVG PI ++KI AE E
Sbjct: 352 IPREIALFFHAAGILILEGYGLTETTAAVTVNTPFNYKFGSVGRPIGEVKLKI--AEDGE 409
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+L V+ +VM+ Y+KNP ATK+A DGW +TGDIG I P GG
Sbjct: 410 IL---------VKSDKVMKEYYKNPEATKEAFT-DGWFHTGDIGEILP----------GG 449
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 408
L + R KD I + G+ V P LE S I ++V G ++ A++ D+ V
Sbjct: 450 DLKITDRKKDLIKTAGGKYVAPQRLEGLLSLSPYIANVLVHGDQRKYIVALVTLDRPTVE 509
Query: 409 MAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIG 449
AK + ++D + L + + L +RK ++ + Q+
Sbjct: 510 NLAKEKQVSYSDWNSLVQSPFVQDL---IRKAVAETNSQLA 547
>gi|229521309|ref|ZP_04410729.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TM 11079-80]
gi|421355168|ref|ZP_15805500.1| AMP-binding enzyme family protein [Vibrio cholerae HE-45]
gi|229341841|gb|EEO06843.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TM 11079-80]
gi|395954293|gb|EJH64906.1| AMP-binding enzyme family protein [Vibrio cholerae HE-45]
Length = 601
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 181/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|448464161|ref|ZP_21598384.1| AMP-dependent synthetase and ligase [Halorubrum kocurii JCM 14978]
gi|445815948|gb|EMA65865.1| AMP-dependent synthetase and ligase [Halorubrum kocurii JCM 14978]
Length = 690
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 166/362 (45%), Gaps = 71/362 (19%)
Query: 76 LSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G Y +F+ G + Y + L++D +P SVP VYE LY
Sbjct: 282 LSFLPLAHVFERLAGHYMMFAAGATVGYAESPDTLREDFGLVRPTTTTSVPRVYEKLYDA 341
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q S R+ A+ + R + AL+D A
Sbjct: 342 IREQASESPVKERIFEWAV-----------------DVGRAHHETEAPGALLDAKRA--- 381
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
+A++LV+ ++ AIG + +SGGGSL + Y A+ + + GYGLTE
Sbjct: 382 ---------VADRLVFSSVREAIGGNIDFFISGGGSLSAELCALYHAMDLPILEGYGLTE 432
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKI----VDAETNEVLPAGSKGIVKVRGSQVMQG 308
+SPVI P +G++G P+ TEI I V E E+ AG G + VRG QV G
Sbjct: 433 TSPVICVNPPEEPQVGTIGPPVVETEIAIDGTVVGEEVAEL--AGDVGELLVRGPQVTDG 490
Query: 309 YFKNPSATKQALDE------------------DG-----WLNTGDIGWIAPHHSRGRSRR 345
Y+ P AT +A E DG W +TGDI + P
Sbjct: 491 YWNRPDATAEAFTEPDRLPEDAVVAGTPPDERDGDPDEPWFHTGDIVQLRPD-------- 542
Query: 346 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
G + RAK +VLSTG+NV P +E+ + + Q VV+G ++ A+IVP+ E
Sbjct: 543 --GYVAFRERAKQLLVLSTGKNVAPGPIEDRFAANEFVEQCVVLGDGRKFVSALIVPNFE 600
Query: 406 EV 407
+V
Sbjct: 601 KV 602
>gi|417825702|ref|ZP_12472290.1| AMP-binding enzyme family protein [Vibrio cholerae HE48]
gi|340047187|gb|EGR08117.1| AMP-binding enzyme family protein [Vibrio cholerae HE48]
Length = 601
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 181/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|325962926|ref|YP_004240832.1| AMP-forming long-chain acyl-CoA synthetase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469013|gb|ADX72698.1| AMP-forming long-chain acyl-CoA synthetase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 602
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 160/334 (47%), Gaps = 51/334 (15%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYS 132
K + LP HV+ R + G + +T ++NL DLQ Y+P ++++VP V+E +Y+
Sbjct: 226 KTIMFLPLAHVFARFISVLAMAAGTTVAHTPDIKNLLADLQSYEPTFILAVPRVFEKVYN 285
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
+ + I A TA F R + + + L
Sbjct: 286 SALTKAEDG-------GKGAIFHKAADTAI-----AFSKARQEGRVGLGLKL-------- 325
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
H L +KLVY K+++A+G A VSGGG L + F++ IG++V GYGLT
Sbjct: 326 -------RHALFDKLVYGKLRAAMGGHVAHAVSGGGPLGERLGHFFQGIGLQVLEGYGLT 378
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E++ I+ P+ +GSVG P+ +KI S G + +G VM+GY+K
Sbjct: 379 ETTAPISVNTPSLIKIGSVGKPLPGNAVKIA-----------SDGEILAKGVCVMRGYYK 427
Query: 312 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 371
P T + D DGW TGDIG + G + + GR K+ IV + G+NV P
Sbjct: 428 RPDLTAETFD-DGWFRTGDIGRLDED----------GFVWITGRKKEIIVTAGGKNVIPA 476
Query: 372 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
LE+ +L+ Q++V+G ++ GA+I D+E
Sbjct: 477 LLEDQIRADALVSQVLVVGDNRPFIGALITLDQE 510
>gi|336320550|ref|YP_004600518.1| AMP-dependent synthetase/ligase [[Cellvibrio] gilvus ATCC 13127]
gi|336104131|gb|AEI11950.1| AMP-dependent synthetase and ligase [[Cellvibrio] gilvus ATCC
13127]
Length = 605
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 173/356 (48%), Gaps = 51/356 (14%)
Query: 54 KMTNFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDL 112
++T + L ++V +E G + L +P HV+ R G L ++ R L DDL
Sbjct: 207 ELTVNAVEGLREVV-SEPGSRTLLFMPLAHVFARFIHVLCMPAGAVLGHSPDTRTLLDDL 265
Query: 113 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 172
++P ++++VP V+E +Y+G +++ ++ + + + + S Y+ G
Sbjct: 266 ASFRPTFILAVPRVFEKVYNGAEQK--AAAGGKGSIFQRAAKTSIVYSRALDTPRG---- 319
Query: 173 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPM 231
PS W R+ H +A+ LV ++++ + G +K +SGG L
Sbjct: 320 -----PSP--------WLRL-------QHKVADVLVLHRLRALLGGQAKWAISGGAPLGE 359
Query: 232 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 291
+ FY +G+KV GYGLTE++ RP +G+VG P+ T ++I D
Sbjct: 360 RLGHFYRGVGLKVLEGYGLTETTAPATVNRPARTKIGTVGKPLPGTAVRIAD-------- 411
Query: 292 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
G ++++G QV QGY N +AT++++ DGW TGD+G + G L
Sbjct: 412 ---DGEIEIKGIQVFQGYHNNDAATQESM-HDGWFRTGDLGSLDDE----------GYLR 457
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
+ GR K+ IV + G+NV P LE+ LI Q+VV+G + GA++ D E V
Sbjct: 458 ITGRKKEIIVTAGGKNVAPAVLEDRLRGHPLISQVVVVGDQRPFIGALVTLDPEGV 513
>gi|153826974|ref|ZP_01979641.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-2]
gi|149739172|gb|EDM53454.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-2]
Length = 601
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 181/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|254226261|ref|ZP_04919854.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V51]
gi|125621234|gb|EAZ49575.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V51]
Length = 601
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 181/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|149277989|ref|ZP_01884128.1| AMP-binding enzyme, putative [Pedobacter sp. BAL39]
gi|149231187|gb|EDM36567.1| AMP-binding enzyme, putative [Pedobacter sp. BAL39]
Length = 637
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 171/349 (48%), Gaps = 49/349 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIF-SRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
+ FLS LP HV+ER Y + ++G ++ + ++ L ++ +P M VP + E +
Sbjct: 233 ETFLSFLPLSHVFERTATYHVCCAQGCKIAFAQSLELLAKNMGEIRPTVMNCVPRLLERI 292
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
+ K I + +A + ++ + A ++ I E N K P L A
Sbjct: 293 HD---KAIKSGTADGGLKSKIFLWALEAGQQYRNIKE------NGKTPGLLSA------- 336
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
LAEKLV+ KI+ G + K +SGG +LP ++ F+ +G+K+ G+G
Sbjct: 337 --------GKKALAEKLVFSKIKEKTGGNLKFMISGGAALPKNVGEFFGNLGIKILEGFG 388
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEI--------KIVDAETNEVLPAG---SKGIV 298
LTE+SPV+A V G+VG I EI K+++ +T+E +G +
Sbjct: 389 LTETSPVMAVTEFHRQVYGTVGRVIPGIEIGIQHVETKKMINIQTHETFKENFECEEGEI 448
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
VRG VMQGYF P+ T +A+D+D W +TGDIG R G L + R K+
Sbjct: 449 IVRGHCVMQGYFNKPAETAEAIDKDNWFHTGDIG-----------RFYKGNLQITDRLKN 497
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
IV + G+NV P +E L+S I + +IG + A ++P++E +
Sbjct: 498 MIVNAYGKNVYPTPVENNYLKSLKIDGLFLIGDKREYLTAFVIPNRENM 546
>gi|383831140|ref|ZP_09986229.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
xinjiangensis XJ-54]
gi|383463793|gb|EID55883.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
xinjiangensis XJ-54]
Length = 598
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 163/338 (48%), Gaps = 51/338 (15%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYE 128
E G+ L LP H+ RA FS + L +TA ++ L DL ++P ++++VP V+E
Sbjct: 221 EAGNSLLLFLPLAHILARAIALTAFSSRVTLGHTADIKELVADLGTFRPTFVVAVPRVFE 280
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+G ++ S + + A + AY+ Q Q + L
Sbjct: 281 KVYNG--AKLKAHSGGKGKIFDAAEATAVAYS--------------QAQDTGRTGLG--- 321
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
L H + +KLVY K+++A+G A VSGG L + F+ IGV V G
Sbjct: 322 --------LRLKHAVFDKLVYSKLRAALGGRCIAAVSGGAPLGARLAHFFRGIGVPVFEG 373
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTE+S +G+VG P+ T ++I AE EVL ++G V
Sbjct: 374 YGLTETSAAANVNTVEAFKVGTVGRPVAGTSVRI--AEDGEVL---------LKGDVVFG 422
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
Y+ NP AT++AL EDGW +TGD+G + G L + GR K+ IV + G+N
Sbjct: 423 EYWNNPEATREAL-EDGWFHTGDLGELDDE----------GFLKITGRKKEIIVTAGGKN 471
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
V P LE+ + LI Q +V+G + GA++ D+E
Sbjct: 472 VAPSGLEDTLKANPLISQAMVVGDQRPFIGALVTIDEE 509
>gi|229527090|ref|ZP_04416485.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 12129(1)]
gi|229335487|gb|EEO00969.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 12129(1)]
Length = 601
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 181/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|218261977|ref|ZP_03476629.1| hypothetical protein PRABACTJOHN_02300, partial [Parabacteroides
johnsonii DSM 18315]
gi|218223656|gb|EEC96306.1| hypothetical protein PRABACTJOHN_02300 [Parabacteroides johnsonii
DSM 18315]
Length = 483
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 188/377 (49%), Gaps = 49/377 (12%)
Query: 76 LSMLPPWHVYERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLV 126
L +LP H + G++IF S+G +++ T + LK+ +++ ++P+ ++SVP +
Sbjct: 71 LVILPLDHCFAHVVGFYIFMSKGASVATVQVGRTGLETLKNIPVNIKEFKPYLILSVPAL 130
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
+ I++ I R + + R+ IY G + +L
Sbjct: 131 AKNFKKNIEQGI-------RAQGKHVTRLFNFALKVAYIYNGDGGEDKGRGARFL----- 178
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 245
L PL L +++++ K++ G K + GG L + FY AIG+ +
Sbjct: 179 ----------LKPLVSLFDRVLFTKVRENFGGQLKFFIGGGALLDKDLQKFYYAIGLPMY 228
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGL+E++PVI+ P + GS G + ++KI DAE E LP G KG + +RG V
Sbjct: 229 QGYGLSEATPVISTNGPHRHTFGSSGVLVRPLDLKICDAEGKE-LPTGEKGEIVIRGENV 287
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
M GY+KNP +T + + +GWL TGD+G++ H G+L + GR K ++ S G
Sbjct: 288 MAGYWKNPVSTAETV-RNGWLYTGDMGYMG--HD--------GLLYVLGRFKSLLIGSDG 336
Query: 366 ENVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASE 423
E P +EEA + SS I Q+++ A++VP+K+ + K L+ H D +S+
Sbjct: 337 EKYSPEGIEEALVEHSSCIDQLILYNNQSPYTVALVVPNKDRL---KKHLAHQHLDLSSD 393
Query: 424 LSKEKTISLLYGELRKW 440
+E+ I ++ ++ ++
Sbjct: 394 KGREEAIRIIQSQIDRF 410
>gi|16271978|ref|NP_438175.1| long chain fatty acid CoA ligase [Haemophilus influenzae Rd KW20]
gi|260580694|ref|ZP_05848521.1| long chain fatty acid CoA ligase [Haemophilus influenzae RdAW]
gi|1170730|sp|P44446.1|LCFH_HAEIN RecName: Full=Putative long-chain-fatty-acid--CoA ligase; AltName:
Full=Long-chain acyl-CoA synthetase; Short=LACS
gi|1572946|gb|AAC21681.1| long chain fatty acid coA ligase, putative [Haemophilus influenzae
Rd KW20]
gi|260092756|gb|EEW76692.1| long chain fatty acid CoA ligase [Haemophilus influenzae RdAW]
Length = 607
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 164/362 (45%), Gaps = 47/362 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 225 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 284
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + Y F L N K +L
Sbjct: 285 IYAAVLDKVQKAPKLRQIMFHWAISVGQKY---------FDLRANNKAIPFL-------- 327
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 328 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 380
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 381 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 429
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 430 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 479
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 480 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 539
Query: 429 TI 430
I
Sbjct: 540 DI 541
>gi|269137982|ref|YP_003294682.1| AMP-binding enzyme-family protein [Edwardsiella tarda EIB202]
gi|387866716|ref|YP_005698185.1| long-chain-fatty-acid--CoA ligase [Edwardsiella tarda FL6-60]
gi|267983642|gb|ACY83471.1| putative AMP-binding enzyme-family protein [Edwardsiella tarda
EIB202]
gi|304558029|gb|ADM40693.1| Long-chain-fatty-acid--CoA ligase [Edwardsiella tarda FL6-60]
Length = 600
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 172/366 (46%), Gaps = 47/366 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ G + +Y NL ++ +Q +P M +VP YE ++
Sbjct: 222 DVSLCFLPLSHVFERAWSFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPRFYEKIF 281
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S +Q ++ + RR + R + + +R L +P R
Sbjct: 282 SAVQAKVAQAPWLRRQLFRWAV-----WCGEQRF-----LRERAARPQ----------GR 321
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
++ A +H LA++LV K+++ +G + + G L H+ LF++A+G+ ++ GYG+
Sbjct: 322 LMTA----MHRLADRLVLAKLRAILGGRVRFLPAAGAKLDDHVILFFQALGLNIKYGYGM 377
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE+ ++ GS+G P+ E++I E NE+ +VRG VM+GYF
Sbjct: 378 TETCATVSCWEEQDFRFGSIGRPLPGVEVRI--GEENEI---------QVRGPIVMRGYF 426
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P T Q DGWL TGD G + G L + R KD + S G+ + P
Sbjct: 427 NKPQETAQTFTADGWLKTGDAGALDAQ----------GHLFITERLKDLMKTSNGKYIAP 476
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E R I Q+ VI ++ A+IVP + + A+ +++ + D +L + I
Sbjct: 477 QLVEGTLARDRFIEQVAVIADARKFVSALIVPCFDSLEEYARSINLKYHDRLDLLRHSHI 536
Query: 431 SLLYGE 436
L+ +
Sbjct: 537 VALFEQ 542
>gi|326203752|ref|ZP_08193615.1| AMP-dependent synthetase and ligase [Clostridium papyrosolvens DSM
2782]
gi|325986192|gb|EGD47025.1| AMP-dependent synthetase and ligase [Clostridium papyrosolvens DSM
2782]
Length = 537
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 151/324 (46%), Gaps = 66/324 (20%)
Query: 73 DKFLSMLPPWHVYERACGYF--IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 130
D LS+LP H YE G I+ + +++ +K +L+ Y+P MI VP V E L
Sbjct: 215 DILLSILPNNHTYELTAGILTPIYFGATICLNDSLKMMKRNLKTYKPTIMIVVPAVLEML 274
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
+K+I + A + +N+K S A
Sbjct: 275 ----RKEILKAVANQ--------------------------NKNEKFSS----------A 294
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
I IL +H+ + ++ +I +G + + V GG LP+ I FY +G+K+ GYG
Sbjct: 295 MKITKILKKVHINVSRKLFGEILEVLGGNIRTFVCGGAFLPVEIIDFYTTMGIKLIQGYG 354
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
+TE SP+++A GSVG +KIVD E + V+G VM+GY
Sbjct: 355 ITECSPLVSANTDRNGERGSVGKIGGGCSVKIVDNE------------IWVKGKNVMKGY 402
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+KNP T +A E+GW TGD+G+I + G L + GR K+ +VLS GENV
Sbjct: 403 YKNPEVT-EACMENGWFKTGDLGYIGKN----------GYLYITGRKKNLLVLSNGENVS 451
Query: 370 PLELEEAALRSSLIRQIVVIGQDQ 393
P ELE L I +++V G+D
Sbjct: 452 PEELEGKLLALDCINEVIVFGEDD 475
>gi|156973145|ref|YP_001444052.1| hypothetical protein VIBHAR_00824 [Vibrio harveyi ATCC BAA-1116]
gi|156524739|gb|ABU69825.1| hypothetical protein VIBHAR_00824 [Vibrio harveyi ATCC BAA-1116]
Length = 602
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 182/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + A + EG ++PS +
Sbjct: 280 SAIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDGGYIDEN----------GNLFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|160885360|ref|ZP_02066363.1| hypothetical protein BACOVA_03359 [Bacteroides ovatus ATCC 8483]
gi|156108982|gb|EDO10727.1| AMP-binding enzyme [Bacteroides ovatus ATCC 8483]
Length = 604
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 183/397 (46%), Gaps = 55/397 (13%)
Query: 73 DKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP +E
Sbjct: 221 DKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + IR+ RI+ R K P + L
Sbjct: 281 VYAGVQEKINETTGLKKALMLDAIRVG-------RIH-NLDYLRQGKTPPVMNQL----- 327
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
+ EK +Y ++ IGI + G ++P I+ F ++G+ + VG
Sbjct: 328 ----------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ ++ P +GSVG + E+KI E NE+L +RG + +
Sbjct: 378 YGLTESTATVSCTLPVGYDIGSVGVVLPGIEVKI--GEGNEIL---------LRGKTITK 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K AT A++ DGW +TGD G+ G L L R KD S G+
Sbjct: 427 GYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
V P LE + I QI +I ++ A+IVP V AK I + D +EL +
Sbjct: 476 VAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELLQH 535
Query: 428 KTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F QI ++ EPF++
Sbjct: 536 PKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|262382159|ref|ZP_06075297.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262297336|gb|EEY85266.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 633
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 184/381 (48%), Gaps = 54/381 (14%)
Query: 74 KFLSMLPPWHVYERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVP 124
+ L +LP H + G++IF S+G +++ T + LK+ +++ ++P+ ++SVP
Sbjct: 221 RTLVILPLDHCFAHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVP 280
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+ + I++ I + +RI + Y EG
Sbjct: 281 ALAKNFKKNIEQGIRARGKNAVRLFNLALRIGYIYNGDSDEEEG---------------- 324
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
+ +L PL L +KL++ K++ G K + GG L + FY A+G+
Sbjct: 325 ------KGFRVLLKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIP 378
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
+ GYGL+E++P+I+ P + GS G + ++KI D + N VLP G KG + +RG
Sbjct: 379 MYQGYGLSEATPIISTNGPRRHTFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGE 437
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM GY+KNP++T + E GWL TGD+G++ G+L + GR K ++ S
Sbjct: 438 NVMAGYWKNPASTADTVKE-GWLYTGDMGYMRD-----------GLLYVLGRFKSLLIGS 485
Query: 364 TGENVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-- 420
GE P +EEA + SS I Q+++ A++VP KE + R + H +
Sbjct: 486 DGEKYSPEGIEEALVEHSSCIDQLILYNNQSPYTTALLVPSKERL-----RKHLAHQNLD 540
Query: 421 -ASELSKEKTISLLYGELRKW 440
S+ +E+ I ++ ++ ++
Sbjct: 541 LTSDQGREEAIRIIQRQIDRF 561
>gi|343500486|ref|ZP_08738379.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii ATCC 19109]
gi|418481417|ref|ZP_13050460.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342820330|gb|EGU55154.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii ATCC 19109]
gi|384570934|gb|EIF01477.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 602
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 175/388 (45%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYALYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C +K PS
Sbjct: 280 SAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVCHQEGRK-PSI----------- 319
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 320 ----ALKKSHALADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDKCFNPDSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETAKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNELQQELAKFEQVKKFKLLP 562
>gi|117926829|ref|YP_867446.1| AMP-dependent synthetase and ligase [Magnetococcus marinus MC-1]
gi|117610585|gb|ABK46040.1| AMP-dependent synthetase and ligase [Magnetococcus marinus MC-1]
Length = 509
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 168/341 (49%), Gaps = 51/341 (14%)
Query: 69 AENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLV 126
A D+FLS LP H ER G Y G E+ ++ + L +DL QP +ISVP +
Sbjct: 145 AYTDDRFLSFLPLSHALERTAGCYLPMMAGCEVAFSRGIPYLSEDLAVMQPTVLISVPRI 204
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
+E ++ +Q ++ + + + + + + + ++ G L
Sbjct: 205 FERIHGEVQAKLQHAPEWKVRLFQHTVESGWDHFEHQQGRRGLHLK-------------- 250
Query: 187 WLWARIICAILWPL--HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKV 244
+LWPL L+A KL+ KK+ G + VSGG +L HI F+ +G+ +
Sbjct: 251 --------GLLWPLVKPLVAHKLL-KKLG---GRLRLAVSGGAALDPHISRFFLGLGLPL 298
Query: 245 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 304
GYGLTE++PV++ P N SVG P+ +++I DA+ G + V+G+
Sbjct: 299 VQGYGLTETAPVVSVNTPGDNEPSSVGQPLPGVQVRI-DAQ----------GELCVKGAS 347
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
VM GY+ NP AT++ +D++GW +TGD G + G + + GR K+ +V +T
Sbjct: 348 VMSGYWHNPRATRRVIDQEGWYHTGDKGEL----------DAAGHIKVVGRLKEILVTAT 397
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
G + P ++E A L L Q++V+G+ A++V + E
Sbjct: 398 GRKIPPGDVEGAILADPLFAQVLVVGEGYPYLAALVVLNSE 438
>gi|15642480|ref|NP_232113.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121590764|ref|ZP_01678094.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
2740-80]
gi|121729013|ref|ZP_01682015.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V52]
gi|147675212|ref|YP_001217984.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|153819335|ref|ZP_01972002.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae NCTC
8457]
gi|153822876|ref|ZP_01975543.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae B33]
gi|227082604|ref|YP_002811155.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae M66-2]
gi|227118925|ref|YP_002820821.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|229507458|ref|ZP_04396963.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae BX 330286]
gi|229512347|ref|ZP_04401826.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae B33]
gi|229519483|ref|ZP_04408926.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC9]
gi|229606963|ref|YP_002877611.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae MJ-1236]
gi|254849608|ref|ZP_05238958.1| long-chain-fatty-acid-CoA ligase [Vibrio cholerae MO10]
gi|255746847|ref|ZP_05420792.1| long-chain-fatty-acid--CoA ligase [Vibrio cholera CIRS 101]
gi|262162012|ref|ZP_06031028.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae INDRE 91/1]
gi|262167313|ref|ZP_06035023.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC27]
gi|298500161|ref|ZP_07009966.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|360036356|ref|YP_004938119.1| long-chain acyl-CoA synthetase [Vibrio cholerae O1 str.
2010EL-1786]
gi|379742270|ref|YP_005334239.1| long-chain acyl-CoA synthetase [Vibrio cholerae IEC224]
gi|417814498|ref|ZP_12461151.1| AMP-binding enzyme family protein [Vibrio cholerae HC-49A2]
gi|417818238|ref|ZP_12464866.1| AMP-binding enzyme family protein [Vibrio cholerae HCUF01]
gi|418335481|ref|ZP_12944390.1| AMP-binding enzyme family protein [Vibrio cholerae HC-06A1]
gi|418339446|ref|ZP_12948336.1| AMP-binding enzyme family protein [Vibrio cholerae HC-23A1]
gi|418347017|ref|ZP_12951770.1| AMP-binding enzyme family protein [Vibrio cholerae HC-28A1]
gi|418350773|ref|ZP_12955504.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43A1]
gi|418356029|ref|ZP_12958748.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A1]
gi|419827426|ref|ZP_14350925.1| AMP-binding enzyme family protein [Vibrio cholerae CP1033(6)]
gi|421317974|ref|ZP_15768542.1| AMP-binding enzyme family protein [Vibrio cholerae CP1032(5)]
gi|421322231|ref|ZP_15772783.1| AMP-binding enzyme family protein [Vibrio cholerae CP1038(11)]
gi|421326029|ref|ZP_15776553.1| AMP-binding enzyme family protein [Vibrio cholerae CP1041(14)]
gi|421329687|ref|ZP_15780197.1| AMP-binding enzyme family protein [Vibrio cholerae CP1042(15)]
gi|421333643|ref|ZP_15784120.1| AMP-binding enzyme family protein [Vibrio cholerae CP1046(19)]
gi|421337185|ref|ZP_15787646.1| AMP-binding enzyme family protein [Vibrio cholerae CP1048(21)]
gi|421340612|ref|ZP_15791044.1| AMP-binding enzyme family protein [Vibrio cholerae HC-20A2]
gi|421348160|ref|ZP_15798537.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46A1]
gi|422897573|ref|ZP_16935012.1| AMP-binding enzyme family protein [Vibrio cholerae HC-40A1]
gi|422903772|ref|ZP_16938736.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48A1]
gi|422907656|ref|ZP_16942449.1| AMP-binding enzyme family protein [Vibrio cholerae HC-70A1]
gi|422914496|ref|ZP_16949000.1| AMP-binding enzyme family protein [Vibrio cholerae HFU-02]
gi|422926700|ref|ZP_16959712.1| AMP-binding enzyme family protein [Vibrio cholerae HC-38A1]
gi|423146023|ref|ZP_17133616.1| AMP-binding enzyme family protein [Vibrio cholerae HC-19A1]
gi|423150699|ref|ZP_17138012.1| AMP-binding enzyme family protein [Vibrio cholerae HC-21A1]
gi|423154533|ref|ZP_17141697.1| AMP-binding enzyme family protein [Vibrio cholerae HC-22A1]
gi|423157601|ref|ZP_17144693.1| AMP-binding enzyme family protein [Vibrio cholerae HC-32A1]
gi|423161173|ref|ZP_17148111.1| AMP-binding enzyme family protein [Vibrio cholerae HC-33A2]
gi|423166002|ref|ZP_17152721.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48B2]
gi|423732032|ref|ZP_17705333.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A1]
gi|423771758|ref|ZP_17713598.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A2]
gi|423896810|ref|ZP_17727642.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62A1]
gi|423932013|ref|ZP_17732035.1| AMP-binding enzyme family protein [Vibrio cholerae HC-77A1]
gi|424003448|ref|ZP_17746522.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A2]
gi|424007242|ref|ZP_17750211.1| AMP-binding enzyme family protein [Vibrio cholerae HC-37A1]
gi|424025222|ref|ZP_17764871.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62B1]
gi|424028108|ref|ZP_17767709.1| AMP-binding enzyme family protein [Vibrio cholerae HC-69A1]
gi|424587389|ref|ZP_18026967.1| AMP-binding enzyme family protein [Vibrio cholerae CP1030(3)]
gi|424596043|ref|ZP_18035361.1| AMP-binding enzyme family protein [Vibrio cholerae CP1040(13)]
gi|424599952|ref|ZP_18039130.1| AMP-binding enzyme family protein [Vibrio Cholerae CP1044(17)]
gi|424602714|ref|ZP_18041853.1| AMP-binding enzyme family protein [Vibrio cholerae CP1047(20)]
gi|424607648|ref|ZP_18046588.1| AMP-binding enzyme family protein [Vibrio cholerae CP1050(23)]
gi|424611464|ref|ZP_18050302.1| AMP-binding enzyme family protein [Vibrio cholerae HC-39A1]
gi|424614292|ref|ZP_18053076.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41A1]
gi|424618259|ref|ZP_18056929.1| AMP-binding enzyme family protein [Vibrio cholerae HC-42A1]
gi|424623045|ref|ZP_18061548.1| AMP-binding enzyme family protein [Vibrio cholerae HC-47A1]
gi|424646005|ref|ZP_18083739.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A2]
gi|424653772|ref|ZP_18091151.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A2]
gi|424657593|ref|ZP_18094877.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A2]
gi|440710708|ref|ZP_20891356.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 4260B]
gi|443504822|ref|ZP_21071774.1| AMP-binding enzyme family protein [Vibrio cholerae HC-64A1]
gi|443508728|ref|ZP_21075483.1| AMP-binding enzyme family protein [Vibrio cholerae HC-65A1]
gi|443512566|ref|ZP_21079199.1| AMP-binding enzyme family protein [Vibrio cholerae HC-67A1]
gi|443516125|ref|ZP_21082630.1| AMP-binding enzyme family protein [Vibrio cholerae HC-68A1]
gi|443519918|ref|ZP_21086305.1| AMP-binding enzyme family protein [Vibrio cholerae HC-71A1]
gi|443524810|ref|ZP_21091013.1| AMP-binding enzyme family protein [Vibrio cholerae HC-72A2]
gi|443532394|ref|ZP_21098408.1| AMP-binding enzyme family protein [Vibrio cholerae HC-7A1]
gi|443536208|ref|ZP_21102075.1| AMP-binding enzyme family protein [Vibrio cholerae HC-80A1]
gi|443539737|ref|ZP_21105590.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A1]
gi|449055077|ref|ZP_21733745.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 str. Inaba
G4222]
gi|9657064|gb|AAF95626.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121547405|gb|EAX57518.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
2740-80]
gi|121628695|gb|EAX61165.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V52]
gi|126510116|gb|EAZ72710.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae NCTC
8457]
gi|126519613|gb|EAZ76836.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae B33]
gi|146317095|gb|ABQ21634.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|227010492|gb|ACP06704.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae M66-2]
gi|227014375|gb|ACP10585.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|229344172|gb|EEO09147.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC9]
gi|229352312|gb|EEO17253.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae B33]
gi|229354963|gb|EEO19884.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae BX 330286]
gi|229369618|gb|ACQ60041.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae MJ-1236]
gi|254845313|gb|EET23727.1| long-chain-fatty-acid-CoA ligase [Vibrio cholerae MO10]
gi|255735249|gb|EET90649.1| long-chain-fatty-acid--CoA ligase [Vibrio cholera CIRS 101]
gi|262024288|gb|EEY42979.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC27]
gi|262028261|gb|EEY46918.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae INDRE 91/1]
gi|297540854|gb|EFH76908.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|340035834|gb|EGQ96812.1| AMP-binding enzyme family protein [Vibrio cholerae HCUF01]
gi|340036984|gb|EGQ97960.1| AMP-binding enzyme family protein [Vibrio cholerae HC-49A2]
gi|341619829|gb|EGS45631.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48A1]
gi|341619946|gb|EGS45733.1| AMP-binding enzyme family protein [Vibrio cholerae HC-70A1]
gi|341620751|gb|EGS46517.1| AMP-binding enzyme family protein [Vibrio cholerae HC-40A1]
gi|341636308|gb|EGS61010.1| AMP-binding enzyme family protein [Vibrio cholerae HFU-02]
gi|341645701|gb|EGS69830.1| AMP-binding enzyme family protein [Vibrio cholerae HC-38A1]
gi|356416516|gb|EHH70147.1| AMP-binding enzyme family protein [Vibrio cholerae HC-06A1]
gi|356416913|gb|EHH70534.1| AMP-binding enzyme family protein [Vibrio cholerae HC-21A1]
gi|356422267|gb|EHH75750.1| AMP-binding enzyme family protein [Vibrio cholerae HC-19A1]
gi|356427738|gb|EHH80979.1| AMP-binding enzyme family protein [Vibrio cholerae HC-22A1]
gi|356428406|gb|EHH81633.1| AMP-binding enzyme family protein [Vibrio cholerae HC-23A1]
gi|356429545|gb|EHH82761.1| AMP-binding enzyme family protein [Vibrio cholerae HC-28A1]
gi|356439071|gb|EHH92071.1| AMP-binding enzyme family protein [Vibrio cholerae HC-32A1]
gi|356443666|gb|EHH96485.1| AMP-binding enzyme family protein [Vibrio cholerae HC-33A2]
gi|356445269|gb|EHH98078.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43A1]
gi|356449593|gb|EHI02339.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48B2]
gi|356452527|gb|EHI05206.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A1]
gi|356647510|gb|AET27565.1| long-chain acyl-CoA synthetase [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795780|gb|AFC59251.1| long-chain acyl-CoA synthetase [Vibrio cholerae IEC224]
gi|395916232|gb|EJH27062.1| AMP-binding enzyme family protein [Vibrio cholerae CP1032(5)]
gi|395917867|gb|EJH28695.1| AMP-binding enzyme family protein [Vibrio cholerae CP1041(14)]
gi|395917971|gb|EJH28798.1| AMP-binding enzyme family protein [Vibrio cholerae CP1038(11)]
gi|395928221|gb|EJH38984.1| AMP-binding enzyme family protein [Vibrio cholerae CP1042(15)]
gi|395929045|gb|EJH39798.1| AMP-binding enzyme family protein [Vibrio cholerae CP1046(19)]
gi|395932284|gb|EJH43028.1| AMP-binding enzyme family protein [Vibrio cholerae CP1048(21)]
gi|395939895|gb|EJH50577.1| AMP-binding enzyme family protein [Vibrio cholerae HC-20A2]
gi|395942739|gb|EJH53415.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46A1]
gi|395957678|gb|EJH68210.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A2]
gi|395958149|gb|EJH68652.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A2]
gi|395960785|gb|EJH71145.1| AMP-binding enzyme family protein [Vibrio cholerae HC-42A1]
gi|395970073|gb|EJH79884.1| AMP-binding enzyme family protein [Vibrio cholerae HC-47A1]
gi|395971996|gb|EJH81620.1| AMP-binding enzyme family protein [Vibrio cholerae CP1030(3)]
gi|395974400|gb|EJH83929.1| AMP-binding enzyme family protein [Vibrio cholerae CP1047(20)]
gi|408006131|gb|EKG44307.1| AMP-binding enzyme family protein [Vibrio cholerae HC-39A1]
gi|408010593|gb|EKG48446.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41A1]
gi|408030465|gb|EKG67126.1| AMP-binding enzyme family protein [Vibrio cholerae CP1040(13)]
gi|408040591|gb|EKG76766.1| AMP-binding enzyme family protein [Vibrio Cholerae CP1044(17)]
gi|408041889|gb|EKG77976.1| AMP-binding enzyme family protein [Vibrio cholerae CP1050(23)]
gi|408051829|gb|EKG86905.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A2]
gi|408608216|gb|EKK81619.1| AMP-binding enzyme family protein [Vibrio cholerae CP1033(6)]
gi|408622477|gb|EKK95461.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A1]
gi|408632827|gb|EKL05258.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A2]
gi|408653605|gb|EKL24767.1| AMP-binding enzyme family protein [Vibrio cholerae HC-77A1]
gi|408654098|gb|EKL25241.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62A1]
gi|408844341|gb|EKL84473.1| AMP-binding enzyme family protein [Vibrio cholerae HC-37A1]
gi|408845097|gb|EKL85218.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A2]
gi|408869573|gb|EKM08869.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62B1]
gi|408878384|gb|EKM17394.1| AMP-binding enzyme family protein [Vibrio cholerae HC-69A1]
gi|439974037|gb|ELP50241.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 4260B]
gi|443430901|gb|ELS73459.1| AMP-binding enzyme family protein [Vibrio cholerae HC-64A1]
gi|443434731|gb|ELS80883.1| AMP-binding enzyme family protein [Vibrio cholerae HC-65A1]
gi|443438624|gb|ELS88344.1| AMP-binding enzyme family protein [Vibrio cholerae HC-67A1]
gi|443442661|gb|ELS95969.1| AMP-binding enzyme family protein [Vibrio cholerae HC-68A1]
gi|443446442|gb|ELT03107.1| AMP-binding enzyme family protein [Vibrio cholerae HC-71A1]
gi|443449263|gb|ELT09564.1| AMP-binding enzyme family protein [Vibrio cholerae HC-72A2]
gi|443457784|gb|ELT25181.1| AMP-binding enzyme family protein [Vibrio cholerae HC-7A1]
gi|443460711|gb|ELT31795.1| AMP-binding enzyme family protein [Vibrio cholerae HC-80A1]
gi|443464867|gb|ELT39528.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A1]
gi|448265119|gb|EMB02354.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 str. Inaba
G4222]
Length = 601
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVVKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETTESFDEQGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|451339027|ref|ZP_21909552.1| Long-chain-fatty-acid--CoA ligase [Amycolatopsis azurea DSM 43854]
gi|449418200|gb|EMD23798.1| Long-chain-fatty-acid--CoA ligase [Amycolatopsis azurea DSM 43854]
Length = 599
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 159/338 (47%), Gaps = 51/338 (15%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYE 128
E G+ L LP HV RA S + L +T+ V+NL DL ++P ++++VP V+E
Sbjct: 222 EQGNSLLVFLPLAHVLARAIAVTALSARVTLGHTSDVKNLVADLGTFRPTFVVAVPRVFE 281
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+ +++ + A +++ +Q Q + L
Sbjct: 282 KVYNSAKQKAHGDGKGKIFDAAEATAVAY----------------SQAQDTGGAGLG--- 322
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
L H L +KLV+ K+++A+G A VSGG L + + F+ IGV V G
Sbjct: 323 --------LKVKHALFDKLVFSKLRAALGGRCVAAVSGGAPLGVRLAHFFRGIGVPVFEG 374
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTE+S +G+VG P+ T ++I D G + ++G V
Sbjct: 375 YGLTETSAAACVGTQDGFRVGTVGRPVAGTSVRIAD-----------DGEILLKGDVVFG 423
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GYF N AT +AL EDGW +TGD+G + G L + GR K+ IV + G+N
Sbjct: 424 GYFNNAEATAEAL-EDGWFHTGDLGEL----------DNDGFLKITGRKKEIIVTAGGKN 472
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
V P LE+ S L+ Q +V+G + GA+I D+E
Sbjct: 473 VAPSGLEDTIKASPLVSQAMVVGDQRPFIGALITIDEE 510
>gi|340751819|ref|ZP_08688629.1| long-chain-fatty-acid-CoA ligase [Fusobacterium mortiferum ATCC
9817]
gi|229420782|gb|EEO35829.1| long-chain-fatty-acid-CoA ligase [Fusobacterium mortiferum ATCC
9817]
Length = 829
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 168/355 (47%), Gaps = 82/355 (23%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERAC--------GYFIFSRGIELMYTAVRNLKD 110
IR++ +I + D+ L++LP H+ G F+ + L + LK
Sbjct: 165 NIRAVREIELVNDQDRVLAILPYHHILPLNLTLLMPMYFGTFL----VILEELSSEALKL 220
Query: 111 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 170
L+++Q +I VP V+E L+ I +I ++ A+++ C
Sbjct: 221 ALKKHQISVIIGVPRVWEMLHKAIMGKINSNFVAKKLF-------------------NLC 261
Query: 171 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 229
N L K V+KK+ +G + + VSGG L
Sbjct: 262 KKVNS--------------------------LALSKKVFKKVADELGGNMRVLVSGGAKL 295
Query: 230 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 289
+ ++ +G+ + GYGLTE+SP+IA RP NV+GS G I + E+KI AE E+
Sbjct: 296 DPEVSANFKVLGLPIIEGYGLTETSPIIAFNRPNNNVIGSAGQLIPNIEVKI--AEDEEI 353
Query: 290 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 349
L VRG+ VM+GY+KNP AT +A+D DGW +TGD+G + G
Sbjct: 354 L---------VRGANVMKGYYKNPQATSEAIDSDGWFHTGDLG-----------KFEGDS 393
Query: 350 LVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPD 403
L + GR K+ IVLS G+N+ P ++E A L+ + L+++I V+ + A++ PD
Sbjct: 394 LFIIGRKKEMIVLSNGKNINPGDIESAILKETDLVKEIAVMEYNNHL-MAVVYPD 447
>gi|407275353|ref|ZP_11103823.1| long-chain fatty-acid--CoA ligase [Rhodococcus sp. P14]
Length = 600
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 173/358 (48%), Gaps = 54/358 (15%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYET 129
+G + L LP HV+ R + F G+ + +T+ + L D L ++P++++SVP V+E
Sbjct: 225 SGKRTLLFLPLAHVFAREISFGAFEHGVTVAHTSDLTTLLDQLGEFKPNFILSVPRVFEK 284
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ +++ + + + I+++ A + G L
Sbjct: 285 VYNSAKQKAYDGGKGKIFEKASDTAIAYS-EALDKGGAGLGLKIK--------------- 328
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
H + +KLVY K+++A+G + VSGG +L + F+ +G+ + GY
Sbjct: 329 -----------HFVFDKLVYSKLRAALGGECEQAVSGGAALGARLGHFFRGVGIPIYEGY 377
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTE++ + P +GSVG P+N +I AE E+L ++G V G
Sbjct: 378 GLTETTGGVTLNTPEHQRVGSVGRPVNGHAARI--AEDGELL---------LKGPAVFGG 426
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+KN AT +A+ DGW +TGDIG I G + + GR K+ IV + G+NV
Sbjct: 427 YWKNEKATAEAI-VDGWFHTGDIGRIDED----------GFVHITGRKKELIVTAGGKNV 475
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA--SEL 424
P LE+A LI Q++V+G + GA+I D E + +R I ADA SEL
Sbjct: 476 APAVLEDALRAHPLISQVIVVGDAKPFIGALITLDPEALPGWKERHGIA-ADAPVSEL 532
>gi|172041019|ref|YP_001800733.1| acyl-CoA synthetase [Corynebacterium urealyticum DSM 7109]
gi|448823988|ref|YP_007417156.1| acyl-CoA synthetase [Corynebacterium urealyticum DSM 7111]
gi|171852323|emb|CAQ05299.1| acyl-CoA synthetase [Corynebacterium urealyticum DSM 7109]
gi|448277485|gb|AGE36909.1| acyl-CoA synthetase [Corynebacterium urealyticum DSM 7111]
Length = 611
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 47/338 (13%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 130
G ++ LP HV RA Y + + G + ++ L + QR P+ ++ VP V+E +
Sbjct: 231 GKSAVTFLPLAHVLSRAVSYLLLTTGCTQTHWSDFGTLVTEFQRSNPNMVLGVPRVFEKV 290
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
++G++ + S + +++ Y+ +G L
Sbjct: 291 HAGVRAKASDGSKIGEKLFERAEKVAVEYSKALDTPQGPNLA------------------ 332
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
L + +KL+Y K++ A+G + +SGG +L + F+ +GV + GYG
Sbjct: 333 ------LKTSRAIFDKLIYSKVREAMGGELEYAISGGSALNTELMHFFRGVGVYIYEGYG 386
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTES+ I N++G+VG P+ ++I AE E+L ++G + GY
Sbjct: 387 LTESTAAITVNFEPDNIIGTVGRPVGGNTVRI--AEDGEIL---------LKGDVIFGGY 435
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ N ATK+A DEDG+ TGD+G + P G L + GR K+ +V + G+NV
Sbjct: 436 WNNEEATKEAFDEDGFYATGDLGALLPT----------GHLRITGRKKEILVTAGGKNVS 485
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
P LE+ + LI Q +V+G DQ+ GA+I D+ V
Sbjct: 486 PGPLEDILRSAPLISQAMVVGDDQKFIGALISLDEAAV 523
>gi|297625152|ref|YP_003706586.1| AMP-dependent synthetase and ligase [Truepera radiovictrix DSM
17093]
gi|297166332|gb|ADI16043.1| AMP-dependent synthetase and ligase [Truepera radiovictrix DSM
17093]
Length = 642
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 155/338 (45%), Gaps = 52/338 (15%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 130
G+ LS LP H++ R Y + + G + ++A ++D L+ QP + +VP V E +
Sbjct: 260 GGETALSFLPLTHIFARTLHYGLTAWGTAVYFSAPETVRDHLKEVQPTILATVPRVLEKV 319
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y GI K + ++ + + ++ Y K + R
Sbjct: 320 YEGILKAGGELTGVKKSLFDWSVSLARRYDPEKGTSTFYSTQR----------------- 362
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
L A+KLVY K + A+G + + GG +L + + A G+ V GYG
Sbjct: 363 -----------LAADKLVYDKWREALGSRLRLVIVGGAALRPELVRVFGAAGIHVLQGYG 411
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+SP+I+ RP N G+VG + E+KI +G + RG VM+GY
Sbjct: 412 LTETSPIISYNRPHANRPGTVGQLLAGVEVKI-----------SPQGEILTRGPHVMKGY 460
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
F P T + LD DGWL+TGD+G ++ G L + GR K+ LSTG+ V
Sbjct: 461 FNAPEETAKVLDADGWLHTGDLGEMSDD----------GFLTITGRLKNLFKLSTGKFVM 510
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAI--IVPDKE 405
P LE S L+ +V+G+ ++ A+ + PD +
Sbjct: 511 PQPLEGRLEESPLVEHALVVGEGEKYTAALLFLAPDTD 548
>gi|224025166|ref|ZP_03643532.1| hypothetical protein BACCOPRO_01900 [Bacteroides coprophilus DSM
18228]
gi|224018402|gb|EEF76400.1| hypothetical protein BACCOPRO_01900 [Bacteroides coprophilus DSM
18228]
Length = 601
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 186/396 (46%), Gaps = 55/396 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D ++ LP H++ERA Y+ RG L + ++++ ++ +P M SVP +E +Y
Sbjct: 223 DVVMNFLPFTHIFERAWSYYCLDRGCVLCINLRPQDIQKTIKEVRPTAMCSVPRFWEKVY 282
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW-A 190
+G+ ++I ++ ++++ +++ A+ ID+L
Sbjct: 283 AGVLEKINETTGLKKMLMLDALKVGKAHN------------------------IDYLMNG 318
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGY 248
+ A+L + +K +Y ++ IGI + G ++P ++ F ++G+ + GY
Sbjct: 319 KTPPAMLRAKYKFYDKTIYSLLKKTIGIENGNFFPTAGAAIPEKVEEFVHSVGINMVAGY 378
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTE++ ++ +GSVG + E+K E NE+L +RG + +G
Sbjct: 379 GLTETTATVSCGWIGDYRIGSVGRLMPGLELKF--GEDNEIL---------LRGETITKG 427
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K + T+ AL EDGW +TGD G++ G L L R KD S G+ +
Sbjct: 428 YYKKEAITRNALTEDGWFHTGDAGYMKD-----------GFLYLTERIKDLFKTSNGKYI 476
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP+ ++V AK I + D +L ++
Sbjct: 477 APQAIETKMVVDRYIDQISIIADQRKFVSALIVPEYQQVENYAKDHHIAYTDMKDLLQKT 536
Query: 429 TISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ +R T + F QI ++ EPF++
Sbjct: 537 EIQELF-RMRIETLQQEFAHYEQIKRFTLLPEPFSM 571
>gi|146291172|ref|YP_001181596.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens CN-32]
gi|145562862|gb|ABP73797.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens CN-32]
Length = 598
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 174/361 (48%), Gaps = 58/361 (16%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYET 129
+GD L+ LP HV+ER+ +++ RG +Y + +K+ + +PH + VP E
Sbjct: 220 SGDVSLAFLPLSHVFERSWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEK 279
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+YS +Q ++ S +R+ + +R+ +R +E + + + + S WL
Sbjct: 280 VYSAVQDKVAKSPESRKKMFAWAMRVG------ERQFE---VGQRRAKGSL------WL- 323
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
++ W LA KLVY K+Q+ +G K GG +L +++ F+ AIG+ V GY
Sbjct: 324 -----SLQWQ---LANKLVYSKLQAVLGGRLKFMPCGGAALDLNVGSFFHAIGIPVLCGY 375
Query: 249 GLTESSPVIAARRPTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
G+TE++ + TCN L GS G P+ TEIK+ + +E+L VRG+
Sbjct: 376 GMTETNATV-----TCNTLDNRVPGSNGQPLLETEIKL--GKDDEIL---------VRGA 419
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM+GY+ P T A EDGWL TGD G + G L + R K+ + S
Sbjct: 420 TVMRGYYNRPEDTAAAF-EDGWLKTGDAGRFDAN----------GNLFITDRIKELMKTS 468
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
G+ + P +E R I Q+ +I + A+IVP E + AK + + + E
Sbjct: 469 NGKYIAPQRVEGTVGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYESSLE 528
Query: 424 L 424
L
Sbjct: 529 L 529
>gi|317493293|ref|ZP_07951715.1| AMP-binding enzyme [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918686|gb|EFV40023.1| AMP-binding enzyme [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 600
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 197/435 (45%), Gaps = 57/435 (13%)
Query: 38 LFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T P M N+ Q+R + + D L LP HV+ERA ++
Sbjct: 182 LFTLIYTSGTTGEPKGVMLNYTNMGAQLRLHDERLTVTAEDVSLCFLPLSHVFERAWSFY 241
Query: 93 IFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 151
+ G + +Y + N +++ +Q +P M +VP YE ++S I +++ + +R + +
Sbjct: 242 VMHSGAQNVYLSDTNQVREAMQSVKPTVMCAVPRFYEKIFSAIHEKVAQAKWHKRAMFKC 301
Query: 152 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 211
I + KR F R +P+ +L +H LA+KLV K
Sbjct: 302 AI-----WVGEKR----FLTERAGCKPN---------------VVLSAMHKLADKLVLSK 337
Query: 212 IQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 270
++ +G + + G L ++ LF++A+G ++ GYG+TE+ ++ GS+
Sbjct: 338 LRGILGGRVRFLPAAGAKLDDNVILFFQALGANIKYGYGMTETCATVSCWEENDFRFGSI 397
Query: 271 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 330
G P+ E++I G + ++VRG VM GY+ P T EDGWL TGD
Sbjct: 398 GKPLPDVEVRI-----------GHENEIQVRGPIVMCGYYNKPLETAATFTEDGWLKTGD 446
Query: 331 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 390
G + + G L + R KD + S G+ + P +E + I Q+ VI
Sbjct: 447 AGALDEN----------GNLFITERLKDLMKTSNGKYIAPQMVEGTLAQDRFIEQVAVIA 496
Query: 391 QDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----ELRKWTSKCSF 446
++ A+IVP E + AK +++ + D +L + I ++ E++K +K
Sbjct: 497 DARKFVSALIVPCFESLEEYAKSINLKYHDRLDLLRHSHIVEMFDQRLREMQKGLAKFE- 555
Query: 447 QIGPIHVVDEPFTVN 461
Q+ ++ E F++
Sbjct: 556 QVKRFTLLPEAFSME 570
>gi|343928139|ref|ZP_08767595.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
gi|343761939|dbj|GAA14521.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
Length = 612
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 178/364 (48%), Gaps = 51/364 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
D+ +S LP H+ +R + RGI++ R + L P + VP V++ +
Sbjct: 220 DRSISYLPAAHIADRVSSHAANLMRGIQITTVPDPREIATALPEVHPTFFFGVPRVWQKI 279
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
+GI+ ++ S+ V RAL +F A S A ID +
Sbjct: 280 RAGIEAKVAEESSP---VKRALAGWAFGVGA-----------------STAQARIDGKGS 319
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISK---AGVSGGGSLPMHIDLFYEAIGVKVQVG 247
++ + H +A+KLV K+++A+G+ + AG SG ++P+ + F+ +G+ +
Sbjct: 320 GLLGGVQ---HGIADKLVLHKVRAALGLDEVVFAG-SGAAAIPVEVLKFFLGLGIPILEV 375
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
+G++E++ V P +G+VG PI E+++ D G + VRG VM+
Sbjct: 376 WGMSETTGVSTMTTPDNLKIGTVGPPIRGMEVRLAD-----------DGELLVRGPVVMR 424
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY P T + +D DGWL+TGDI I G V++++ R K+ I+ +G+N
Sbjct: 425 GYRNQPEKTAETIDADGWLSTGDIAKI---------DDDGNVIIVD-RKKELIINESGKN 474
Query: 368 VEPLELEEA-ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
+ P +E A SSLI Q+ IG + A++V D E V + AKRLS+ +AD +ELS
Sbjct: 475 MSPTNIENAMKAASSLIGQVAAIGDSKPYVSALVVLDPEAVAVRAKRLSMPNADLAELST 534
Query: 427 EKTI 430
I
Sbjct: 535 HPEI 538
>gi|149928203|ref|ZP_01916448.1| AMP-dependent synthetase and ligase [Limnobacter sp. MED105]
gi|149823094|gb|EDM82334.1| AMP-dependent synthetase and ligase [Limnobacter sp. MED105]
Length = 559
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 61/365 (16%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR-GIELMYT-AVRNLKDDLQRYQ 116
+ S + + A+ D FLS LP H++ER GY++ R G +++Y + L +DL
Sbjct: 194 NVDSCFQLDIAKPEDVFLSFLPMSHMFERTGGYYLPLRVGAKVIYARGINQLPEDLATQA 253
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + +VP ++E Y IQ + S R+ AF+++ +
Sbjct: 254 PTVLFAVPRIFEKFYGRIQASVKDSRFKRK--------------AFEKLVD--------- 290
Query: 177 QPSYLVALIDWLWARIICAIL--WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHID 234
+ W + I+ + L LL K+ ++ G + V GG +L I
Sbjct: 291 --------VGWRMEQGKGGIVDHFQLPLLRAKVAQPILERLGGRLRLAVVGGAALDSTIA 342
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
+ A+G+ + GYG+TE+ PVI+ RP NV SVG + + E+ + E +E+L
Sbjct: 343 KAFIAMGLPILHGYGMTEACPVISVNRPEGNVPESVGPALPNVEVML--GENDELL---- 396
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
RG +M GY++N ATK A+D DGWL+TGD+ I + +R + + G
Sbjct: 397 -----ARGPNIMLGYWQNEEATKTAIDSDGWLHTGDVAEI-------KDKR----IYIRG 440
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP----DKEEVLMA 410
R KD +VLS GE P + E A + + QIV+IG+ + G I V +KE + A
Sbjct: 441 RIKDIMVLSNGEKFSPQDAEMAIIGDDVFEQIVLIGEGRPFIGMIAVTANSNEKELIKRA 500
Query: 411 AKRLS 415
+RL
Sbjct: 501 NERLQ 505
>gi|343514857|ref|ZP_08751922.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. N418]
gi|342799223|gb|EGU34798.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. N418]
Length = 602
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 179/390 (45%), Gaps = 55/390 (14%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D L LP HV+ERA +++ RG Y ++D L +P M +VP YE
Sbjct: 218 DQDVSLCFLPLSHVFERAWTFYVLYRGATNCYLQDTMQVRDALSEIRPTVMSAVPRFYEK 277
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S I +++ + R+V+ F + C ++ ++PS +
Sbjct: 278 IFSAIHEKVSKAPFIRKVL--------FTWAVNMGAKMAVC-HQDGRKPSLM-------- 320
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GY
Sbjct: 321 -------LKKSYKLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGY 373
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ C S+G + ++KI E NE+L VRG VM+G
Sbjct: 374 GMTETTATVSCWDDKCFDPASIGMSMPGAQVKI--GENNEIL---------VRGPMVMRG 422
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T Q DE G+L TGD G I + G L + R K+ + S G+ +
Sbjct: 423 YYKMPEETAQTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSNGKYI 472
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-- 426
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 473 APQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHH 532
Query: 427 ------EKTISLLYGELRKWTSKCSFQIGP 450
E ++ L EL K+ F++ P
Sbjct: 533 QIVEMLESRVNDLQKELAKFEQVKKFKLLP 562
>gi|448502595|ref|ZP_21612708.1| AMP-dependent synthetase and ligase [Halorubrum coriense DSM 10284]
gi|445694090|gb|ELZ46225.1| AMP-dependent synthetase and ligase [Halorubrum coriense DSM 10284]
Length = 683
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 185/424 (43%), Gaps = 79/424 (18%)
Query: 76 LSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G Y +F+ G + Y + L++D +P SVP VYE LY
Sbjct: 268 LSFLPLAHVFERMAGHYMMFAAGATVAYAESPDTLREDFGLVRPTTTTSVPRVYEKLYDA 327
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q S R+ A+ + R+ + L+D A
Sbjct: 328 IREQASESPVKERIFEWAV-----------------DVGRDHHEADDPGPLLDAKRA--- 367
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
+A++LV+ ++ AIG + + +SGGGSL + Y A+ + + GYGLTE
Sbjct: 368 ---------VADRLVFSSVREAIGGNIEFFISGGGSLSAELCALYHAMDLPILEGYGLTE 418
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP--AGSKGIVKVRGSQVMQGYF 310
+SPVI P +G++G P+ TEI I D E + AG G + VRG QV +GY+
Sbjct: 419 TSPVICVNPPERPQVGTIGPPVVDTEIAIDDGVVGEEVADLAGDVGELLVRGPQVTEGYW 478
Query: 311 KNPSATKQA------LDEDG-------------------------WLNTGDIGWIAPHHS 339
P AT A L ED W TGDI + P
Sbjct: 479 DRPDATADAFVDADDLPEDAVTAGTPPDERVGEGETDSEAAAAEPWFRTGDIVQLRPD-- 536
Query: 340 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 399
G + RAK +VLSTG+NV P +E+ + + Q VV+G ++ A+
Sbjct: 537 --------GYVAFRERAKQLLVLSTGKNVAPGPIEDRFAANEFVEQCVVLGDGRKFVSAL 588
Query: 400 IVPDKEEVLMAAKR--LSIVHADASELSKEKTISLLYGELRKWTSKCSF--QIGPIHVVD 455
IVP+ E V A+ + + A+ ++ + E+ + + QI +V+
Sbjct: 589 IVPNFERVTAWAEDGGVDLPEDRAAVCRDDRVRDRIQAEVDRVNEEFESYEQIKQFRIVE 648
Query: 456 EPFT 459
E FT
Sbjct: 649 EEFT 652
>gi|387774023|ref|ZP_10129303.1| AMP-binding enzyme [Haemophilus parahaemolyticus HK385]
gi|386903110|gb|EIJ67930.1| AMP-binding enzyme [Haemophilus parahaemolyticus HK385]
Length = 591
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 185/411 (45%), Gaps = 58/411 (14%)
Query: 32 SRRDLPLFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHVYE 86
S+R LF+ + T P M ++ Q++S + D LS LP H++E
Sbjct: 172 SKRLDDLFTLIYTSGTTGDPKGVMLDYANLAHQLQSHDQALNISEQDISLSFLPLSHIFE 231
Query: 87 RACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 145
RA +IF RG Y ++ L +P M +VP YE +Y+ + ++ + R
Sbjct: 232 RAWVAYIFHRGTTNCYLENTDQIRQALVETKPTVMCAVPRFYEKIYAAVLDKVEKAPFIR 291
Query: 146 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL-WARIICAILWPLHLLA 204
R + +A A ++ Y+ +R WL W H A
Sbjct: 292 RTL------FHWAIQAGEKHYQSAKPSR-------------WLKWQ----------HKWA 322
Query: 205 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 263
+KLV K+++ +G + GG L I F+ ++GV V++GYG+TE++ ++
Sbjct: 323 DKLVLSKLRALLGGQVRMMPCGGAKLEPTIGKFFHSLGVNVKLGYGMTETTATVSCWEDH 382
Query: 264 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 323
S+G + +TE+KI E NE+L VRG VM+GY+K P T A ED
Sbjct: 383 GFNPNSIGKLMPNTEVKI--GENNEIL---------VRGGMVMRGYYKKPEETANAFTED 431
Query: 324 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 383
G+L TGD G I H G L + R K+ + S G+ + P +E + I
Sbjct: 432 GFLKTGDAGEIDEH----------GNLHITDRIKELMKTSNGKYIAPQYIEGKIGKDKFI 481
Query: 384 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 434
QI +I ++ A+IVP + + AK+L+I + D EL K I ++
Sbjct: 482 EQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYQDRLELIKHAEIIQMF 532
>gi|145629146|ref|ZP_01784945.1| long chain fatty acid CoA ligase [Haemophilus influenzae 22.1-21]
gi|145633445|ref|ZP_01789175.1| long chain fatty acid CoA ligase [Haemophilus influenzae 3655]
gi|145639710|ref|ZP_01795313.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittII]
gi|148825717|ref|YP_001290470.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittEE]
gi|144978649|gb|EDJ88372.1| long chain fatty acid CoA ligase [Haemophilus influenzae 22.1-21]
gi|144986008|gb|EDJ92610.1| long chain fatty acid CoA ligase [Haemophilus influenzae 3655]
gi|145271267|gb|EDK11181.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittII]
gi|148715877|gb|ABQ98087.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittEE]
Length = 599
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 169/370 (45%), Gaps = 48/370 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 320 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TISLLYGELR 438
I ++ ELR
Sbjct: 532 DILKMF-ELR 540
>gi|343503670|ref|ZP_08741479.1| putative long-chain-fatty-acid-CoA ligase [Vibrio ichthyoenteri
ATCC 700023]
gi|342814262|gb|EGU49209.1| putative long-chain-fatty-acid-CoA ligase [Vibrio ichthyoenteri
ATCC 700023]
Length = 602
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 179/390 (45%), Gaps = 55/390 (14%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D L LP HV+ERA +++ RG Y ++D L +P M +VP YE
Sbjct: 218 DQDVSLCFLPLSHVFERAWTFYVLYRGATNCYLQDTMQVRDALSEIRPTVMSAVPRFYEK 277
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S I +++ + R+V+ F + C ++ ++PS +
Sbjct: 278 IFSAIHEKVSKAPFIRKVL--------FTWAVNMGAKMAVC-HQDGRKPSLM-------- 320
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GY
Sbjct: 321 -------LKKSYKLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGY 373
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ C S+G + ++KI E NE+L VRG VM+G
Sbjct: 374 GMTETTATVSCWDDKCFDPASIGMSMPGAQVKI--GENNEIL---------VRGPMVMRG 422
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T Q DE G+L TGD G I + G L + R K+ + S G+ +
Sbjct: 423 YYKMPEETAQTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSNGKYI 472
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-- 426
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 473 APQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHH 532
Query: 427 ------EKTISLLYGELRKWTSKCSFQIGP 450
E ++ L EL K+ F++ P
Sbjct: 533 QIVEMLESRVNDLQKELAKFEQVKKFKLLP 562
>gi|336322685|ref|YP_004602652.1| long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
gi|336106266|gb|AEI14084.1| Long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
Length = 619
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 177/392 (45%), Gaps = 58/392 (14%)
Query: 71 NGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 128
N + LS LP H ER GY+I G EL + ++ + +++ +P MISVP ++E
Sbjct: 222 NEETLLSFLPLSHALERTVGYYITLMNGCELAFAESIEKVPENMTEIRPTVMISVPRLFE 281
Query: 129 TLYSGIQKQIFTSSAAR-RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
+YS I I S + ++V RAL + Y K I + + K Y
Sbjct: 282 KIYSRIFDNIHQMSVIKSKLVHRAL-DVGKEYVRRKYITKDLPESLKVKYRFY------- 333
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
+KLV++KI+ G K VSGG L I+ F+ IG+ +
Sbjct: 334 -----------------DKLVFRKIRQRFGGRMKFFVSGGAPLDKTINEFFWVIGIPILE 376
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE+SP I+ GSVG +TE K+ A+ E++ V+ VM
Sbjct: 377 GYGLTETSPAISINTLDDVKFGSVGTAFEYTEFKV--AQDGELM---------VKSPAVM 425
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GYF++ TK+ E+GWL TGD+ I G + ++ R K+ IV + G+
Sbjct: 426 KGYFRDDEKTKEMFTEEGWLKTGDVAEIDED----------GFIFIKDRKKEIIVTAGGK 475
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
N+ P +E I Q+ V G ++ A+IVP+ E + A+ + D +L K
Sbjct: 476 NIAPQPIENEMKLDKYISQVYVHGDNKPYLTALIVPNFERLFEFARENKLKFFDVGDLVK 535
Query: 427 EKTISLLY--------GELRKWTSKCSFQIGP 450
+ ++ L+ L K+ + F I P
Sbjct: 536 NEKVTELFRSRIEEINSNLPKYETIKKFSIVP 567
>gi|448529142|ref|ZP_21620401.1| AMP-dependent synthetase and ligase [Halorubrum hochstenium ATCC
700873]
gi|445709575|gb|ELZ61401.1| AMP-dependent synthetase and ligase [Halorubrum hochstenium ATCC
700873]
Length = 692
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 187/426 (43%), Gaps = 81/426 (19%)
Query: 76 LSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G Y +F+ G + Y + L++D +P SVP VYE LY
Sbjct: 275 LSFLPLAHVFERMAGHYMMFAAGATVAYAESPDTLREDFGLVRPTTTTSVPRVYEKLYDA 334
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q S R+ A +++ A+ P
Sbjct: 335 IREQASESPVKERIFEWA-VKVGRAH-------------HEADDPG-------------- 366
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
IL +A++LV+ ++ AIG + + +SGGGSL + Y A+ + + GYGLTE
Sbjct: 367 -PILDAKRAVADRLVFSSVREAIGGNIEFFISGGGSLSAELCALYHAMDLPILEGYGLTE 425
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP--AGSKGIVKVRGSQVMQGYF 310
+SPVI+ P +G++G P+ TEI I DA E + G G + VRG QV GY+
Sbjct: 426 TSPVISVNPPERPTVGTIGPPVVDTEIAIDDAVVGEEVADLDGDVGELLVRGPQVTDGYW 485
Query: 311 KNPSATKQAL---DE------------------------------DGWLNTGDIGWIAPH 337
P AT++A DE + W TGDI + P
Sbjct: 486 NRPDATEEAFVAADELPEGVVTAGTPPDERVGVEGDAPDASDAAAEPWFRTGDIVQLRPD 545
Query: 338 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 397
G + RAK +VLSTG+NV P +E+ + + Q VV+G ++
Sbjct: 546 ----------GYIAFRERAKQLLVLSTGKNVAPGPIEDRFAANEFVEQCVVLGDGRKFVS 595
Query: 398 AIIVPDKEEVL--MAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF--QIGPIHV 453
A+IVP+ E+V A+ + + A A ++ + E+ + + +I +
Sbjct: 596 ALIVPNFEKVAAWADAEGIDLSEAPAEICRDDRVRERIQAEVDRVNEEFESYEKIKQFRL 655
Query: 454 VDEPFT 459
V+E FT
Sbjct: 656 VEEEFT 661
>gi|149907514|ref|ZP_01896261.1| long-chain acyl-CoA synthetase [Moritella sp. PE36]
gi|149809184|gb|EDM69113.1| long-chain acyl-CoA synthetase [Moritella sp. PE36]
Length = 595
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 180/373 (48%), Gaps = 52/373 (13%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLK---DDLQRYQPHYMIS 122
++ D ++ LP HV ER +++ G + ++ + N K D + +P +++
Sbjct: 209 MIDVSETDTSIAFLPLSHVLERTWSFYLMHSGAKNVH--LENPKLIIDVIAEVKPTLLVA 266
Query: 123 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 182
VP +YE +YS I ++ ++SA ++ + ++ A+ F L + +QPS+
Sbjct: 267 VPRLYEKIYSTIHTRLESASAVKKALFGWATKVGLAH---------FKLVHSNQQPSF-- 315
Query: 183 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIG 241
WL ++ H LA++L++ K++ +G + + GG + I+ F+++IG
Sbjct: 316 ----WLASQ---------HKLADRLIFSKLRGILGGNTRFLPCGGAKVDPDINQFFQSIG 362
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 301
+++Q GYG+TE++ + R T GS+G P+ E+KI D NE+L VR
Sbjct: 363 IQIQAGYGMTETTATVCCHRGTGYDFGSIGLPLPDMEVKIGD--DNEIL---------VR 411
Query: 302 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 361
VM+GY+K P T++ DGWL TGD G I G +V+ R K+ +
Sbjct: 412 SDTVMKGYYKMPEETEKNF-IDGWLKTGDAGKIL----------ANGEVVMTERIKELMK 460
Query: 362 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 421
S G+ + P +E + I Q+ + + A+IVP + + A +++ +
Sbjct: 461 TSNGKYIAPQLVEGTLNKDHFIDQVAIFADSRHFVSALIVPSFDALEEYANSINLQFSSK 520
Query: 422 SELSKEKTISLLY 434
+EL + I ++
Sbjct: 521 AELLRHSHIVTMF 533
>gi|343508946|ref|ZP_08746243.1| putative long-chain-fatty-acid-CoA ligase [Vibrio scophthalmi LMG
19158]
gi|342806012|gb|EGU41253.1| putative long-chain-fatty-acid-CoA ligase [Vibrio scophthalmi LMG
19158]
Length = 602
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 179/390 (45%), Gaps = 55/390 (14%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D L LP HV+ERA +++ RG Y ++D L +P M +VP YE
Sbjct: 218 DQDVSLCFLPLSHVFERAWTFYVLYRGATNCYLQDTMQVRDALSEIRPTVMSAVPRFYEK 277
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S I +++ + R+V+ F + C ++ ++PS +
Sbjct: 278 IFSAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-HQDGRKPSLM-------- 320
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GY
Sbjct: 321 -------LKKSYKLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGY 373
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ C S+G + ++KI E NE+L VRG VM+G
Sbjct: 374 GMTETTATVSCWDDKCFDPASIGMSMPGAQVKI--GENNEIL---------VRGPMVMRG 422
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T Q DE G+L TGD G I + G L + R K+ + S G+ +
Sbjct: 423 YYKMPEETAQTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSNGKYI 472
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-- 426
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 473 APQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHH 532
Query: 427 ------EKTISLLYGELRKWTSKCSFQIGP 450
E ++ L EL K+ F++ P
Sbjct: 533 QIVEMLESRVNDLQKELAKFEQVKKFKLLP 562
>gi|453382146|dbj|GAC83353.1| putative fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 612
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 183/393 (46%), Gaps = 50/393 (12%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQ 116
++ SL DIV A D+ +S LP H+ +R + RGI+L R + L +
Sbjct: 206 ELASLADIVDAGFDDRAISYLPAAHIADRVSSHAANMVRGIQLTTVPDPREIAAALPEVR 265
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + VP V++ + +GI+ R+ + K+ G+ L K
Sbjct: 266 PTFFFGVPRVWQKIRAGIEA-----------------RLGEETSPVKKALAGWALGMGTK 308
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS--LPMHID 234
+A R + + H LA++L+ K+++A+G+ + +G G+ +P+ +
Sbjct: 309 AADARLA------GRELGVLDRIGHELADRLILHKVRAALGLDEVDFAGSGAAAIPLEVL 362
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
++ +G+ V +G++E++ V P +G+VG PI E+K+ AE E+L
Sbjct: 363 KYFLGLGLPVLEVWGMSETTGVSTMTTPDDLKIGTVGKPIRGIEVKL--AEDGELL---- 416
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
VRG VM GY K P T + +D DGWL TGDI I G + +
Sbjct: 417 -----VRGPVVMNGYRKQPDKTAETIDPDGWLATGDIATI----------DADGHVTIVD 461
Query: 355 RAKDTIVLSTGENVEPLELEEA-ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
R K+ I+ +G+N+ P +E SSLI Q+V IG + A++V D E V AKR
Sbjct: 462 RKKELIINESGKNMSPTNIENTMKAVSSLIAQVVAIGDGEPYVSALVVLDPEAVEAYAKR 521
Query: 414 LSIVHADASELSKEKTI-SLLYGELRKWTSKCS 445
L++ +ELS I + G +R+ ++ S
Sbjct: 522 LNLGQGGFAELSSHPAIVEEITGAIREGNTRLS 554
>gi|229514108|ref|ZP_04403570.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TMA 21]
gi|229349289|gb|EEO14246.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TMA 21]
Length = 601
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETTESFDEQGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|269955922|ref|YP_003325711.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
gi|269304603|gb|ACZ30153.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
Length = 606
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 164/356 (46%), Gaps = 55/356 (15%)
Query: 57 NFQIRSL--YDIVPA---ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKD 110
NF SL D++P G + L LP HV+ R S L + V+NL
Sbjct: 206 NFAHVSLNAADVLPEVIDHEGARTLLFLPIAHVFARLIQVATLSANTVLGHAPDVKNLVA 265
Query: 111 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 170
DL +QP ++++VP V+E +Y+ +++ S R++ + + G
Sbjct: 266 DLGSFQPTFLLAVPRVFEKVYNSAEQKASASKLKRQIF-------------YWAVRTGIA 312
Query: 171 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSL 229
+R Q S + A L H LA+KLV K++ A+G VSGG L
Sbjct: 313 ASRAQDTGS-------------VPAALAFQHRLADKLVLSKLREAMGGHVVHAVSGGAPL 359
Query: 230 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 289
+ F+ +GV V GYGLTE++ A P +G+VG P+ T IKI D
Sbjct: 360 GERLGHFFRGVGVTVLEGYGLTETTAPAAVNLPRSVAIGTVGPPLPGTSIKIDD------ 413
Query: 290 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 349
G + ++G V +GY P T + L +DGW TGD+G + S+GR R
Sbjct: 414 -----DGEILIKGPHVFRGYRNQPELTAEVL-QDGWFRTGDLGTL---DSQGRLR----- 459
Query: 350 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+ GR K+ IV + G+NV P LE+ L+ Q+VV+G + GA++ D E
Sbjct: 460 --ITGRKKEIIVTAGGKNVAPALLEDRLRSHPLVSQVVVVGDQRPFIGALVTLDAE 513
>gi|123441018|ref|YP_001005007.1| AMP-binding protein [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122087979|emb|CAL10767.1| putative AMP-binding enzyme-family protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 599
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 174/368 (47%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP HV+ERA +++ G + +Y + N ++ +Q +P M +VP YE
Sbjct: 220 SDDTSLSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVRAAMQAVKPTVMCAVPRFYEK 279
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S I ++ + RR++ R +A +R ++ Q S W
Sbjct: 280 VFSAINDKVALAKWHRRMLFR------WAVGCGERKFQNL----QSGQTS------SWFS 323
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
+ ++ L ++LV K++ +G + + G L +I LF++AIG+ ++ GY
Sbjct: 324 EQ--------MYKLTDRLVLSKLRGVLGGKVRFLPAAGARLDDNIILFFQAIGINIKYGY 375
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE+ ++ T GS+G P+ E+++ G++ ++VRG VM+G
Sbjct: 376 GMTETCATVSCWEETDFRFGSIGKPLPGIEVRL-----------GAENEIQVRGPIVMRG 424
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
YF P T ++ EDGWL TGD G + P G L + R KD + S G+ +
Sbjct: 425 YFNKPQETAESFTEDGWLKTGDAGALDPQ----------GNLFITERLKDLMKTSGGKYI 474
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP E + A +++ + D EL +
Sbjct: 475 APQMIEGTLGQDRFIEQIAIIADTRKFVSALIVPCFESLEEYAHSINLKYHDRLELLRHS 534
Query: 429 TISLLYGE 436
I L+ +
Sbjct: 535 HIVSLFEQ 542
>gi|293392874|ref|ZP_06637192.1| AMP-binding enzyme [Serratia odorifera DSM 4582]
gi|291424733|gb|EFE97944.1| AMP-binding enzyme [Serratia odorifera DSM 4582]
Length = 599
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 191/421 (45%), Gaps = 54/421 (12%)
Query: 34 RDL-PLFSFVLIDLNTWMPIPKMTNFQIRS----LYDI-VPAENGDKFLSMLPPWHVYER 87
RDL LF+ + T P M +++ + L+D + + D LS LP HV+ER
Sbjct: 178 RDLQDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTVDADDVSLSFLPLSHVFER 237
Query: 88 ACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 146
A +FI G + ++ + ++D + +P M +VP YE +YS + +++ + RR
Sbjct: 238 AWSFFIMHSGAQNVFLPNTDWVRDAMAAVRPSVMCAVPRFYEKIYSAVHEKVARAPWWRR 297
Query: 147 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 206
+ I C R Q AR I L H A+K
Sbjct: 298 KLFHWAIG---------------CGERKFLQERA---------ARPIGKTLALAHRWADK 333
Query: 207 LVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 265
LV K++ +G + + G L ++ LF++A+GV ++ GYG+TE+ ++
Sbjct: 334 LVLSKLRGILGGRVRFLPAAGAKLDDNVILFFQAMGVNIKYGYGMTETCATVSCWEEQDF 393
Query: 266 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 325
GS+G P+ E++I AE NE+ +VRG VM+GYF P T A DGW
Sbjct: 394 RFGSIGKPLPTLEVRI--AEENEI---------QVRGPIVMRGYFNKPLETADAFTADGW 442
Query: 326 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 385
L TGD G + P G L + R KD + S G+ + P LE + I Q
Sbjct: 443 LKTGDAGTVDPQ----------GNLFITERLKDLMKTSGGKYIAPQMLEGRLAQDRFIEQ 492
Query: 386 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTSKC 444
+ ++ ++ A+IVP E + + AK +++ + D EL + I + LR+ ++
Sbjct: 493 VAIVADTRKFVSALIVPCFESLELYAKSINLKYHDRLELLRNGHIIEMFEARLREMQNEL 552
Query: 445 S 445
+
Sbjct: 553 A 553
>gi|373467688|ref|ZP_09558982.1| AMP-binding enzyme [Haemophilus sp. oral taxon 851 str. F0397]
gi|371758409|gb|EHO47182.1| AMP-binding enzyme [Haemophilus sp. oral taxon 851 str. F0397]
Length = 602
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 167/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I +G L Y N ++ L +P M +VP YE
Sbjct: 217 DQDVSLSFLPFSHIFERAWAAYILHKGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K+ +G S K GG L I LF+ AIG+ +++GY
Sbjct: 320 -------LKKQFALADKLVLSKLHQLLGGSIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADTKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 532 EILKMFEQ 539
>gi|448363816|ref|ZP_21552411.1| AMP-dependent synthetase and ligase [Natrialba asiatica DSM 12278]
gi|445645400|gb|ELY98404.1| AMP-dependent synthetase and ligase [Natrialba asiatica DSM 12278]
Length = 680
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 162/357 (45%), Gaps = 67/357 (18%)
Query: 75 FLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYS 132
+S LP HV+ER G+F+ F+ G + Y + LK+D + +P SVP VYE +Y
Sbjct: 263 LVSYLPLAHVFERTAGHFLLFAAGATVAYAESSDTLKEDFRTVRPTGATSVPRVYEKIYD 322
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I+++ S R+ A T R Y A
Sbjct: 323 AIREEATESPIKERIFDWA--------TDVSRAY---------------------YRADD 353
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
IL +A+KLV+ K+++A+G + + VSGGGSL + Y +G+ + GYGLT
Sbjct: 354 PGPILEFKLSVADKLVFSKVKAALGGNVEMLVSGGGSLSEDLCTLYHGMGLPILEGYGLT 413
Query: 252 ESSPVIAARRPTCNVLGSVGHPI---NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
E+SPV+ P +G+VG + + T + + + + G G + VRG V +G
Sbjct: 414 ETSPVVTTNPPEAPKIGTVGPAVIDCDATVDESIAPDGDAASTPGETGELLVRGPNVTEG 473
Query: 309 YFKNPSATKQALDE----------------------DGWLNTGDIGWIAPHHSRGRSRRC 346
Y+ P+AT +A E DGW TGDI I P
Sbjct: 474 YWNKPAATDRAFTEDAPGESANDADRDGGASRTDADDGWFRTGDIVTIRPD--------- 524
Query: 347 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
G + R K +VLSTG+NV P +E+ + L+ Q +V+G ++ GA+IVP+
Sbjct: 525 -GYIEFHERTKQLVVLSTGKNVAPAPIEDTFAANELVEQCLVVGDGEKFIGALIVPN 580
>gi|337286987|ref|YP_004626460.1| AMP-dependent synthetase and ligase [Thermodesulfatator indicus DSM
15286]
gi|335359815|gb|AEH45496.1| AMP-dependent synthetase and ligase [Thermodesulfatator indicus DSM
15286]
Length = 582
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 181/393 (46%), Gaps = 79/393 (20%)
Query: 60 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT---AVRNLKDDLQRY 115
I + D+VP G+ LS+LP H E G+ + G+ + Y R + +DL+
Sbjct: 210 IYQVVDLVP---GNTILSVLPIHHTLECTGGFLLPLYAGLNIYYARSLKSREIIEDLRTA 266
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
+ MI VPL+Y+ + GI+++I + R+ + + L+++ + E
Sbjct: 267 KASVMIGVPLLYQKMLEGIERKIKQAPLPRKTLFKGLLKVVELAERVGKDEE-------- 318
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS--KAGVSGGGSLPMHI 233
A K ++ K++ G+ K V GG LP +
Sbjct: 319 ----------------------------AAKALFAKLREKAGLGHLKYFVCGGAPLPPFV 350
Query: 234 DLFYEAIGVKVQVGYGLTESSPVIAAR---RPTCNVLGSVGHPINHTEIKIVDAETNEVL 290
++ +G+K+ GYGLTE+SPV+ RP SVG PI E+KI + + V
Sbjct: 351 PQKFKRLGIKIIQGYGLTEASPVLTLNPIFRPKAT---SVGVPIPQVEVKIDNPNESGV- 406
Query: 291 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 350
G + +G VM+GY+KNP ATK +D++G+L+TGD+G++ G +
Sbjct: 407 -----GELCFKGPMVMKGYYKNPEATKAVIDDEGFLHTGDLGYVDEE----------GYV 451
Query: 351 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG----AIIVPDKEE 406
+ GRAK+ IV G+NV P E+E R I + +V G R G A+IVPD EE
Sbjct: 452 YVCGRAKNVIVTPAGKNVYPEEVEFELDRRPFILESMVYGIPTERGGEEVAAVIVPDYEE 511
Query: 407 VLMAAKRLSIVHADASELSKEKTISLLYGELRK 439
+ H +LS+E L+ E+++
Sbjct: 512 IDR--------HFSGKQLSEEDVRDLIAKEVKR 536
>gi|399926764|ref|ZP_10784122.1| long-chain-fatty-acid--CoA ligase [Myroides injenensis M09-0166]
Length = 591
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 179/391 (45%), Gaps = 66/391 (16%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
K LS LP HV+ER Y G+ + Y ++ + D+L+ +P+ M VP + E +Y
Sbjct: 218 KALSFLPICHVFERMLIYLYQFNGVAIYYAESIDKMGDNLKEVKPNVMTVVPRLLEKVYD 277
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I + + ++ + + + F Y + R GF
Sbjct: 278 KIFATGSSLTGLKKRIFFWALDVGFKYKPYNR---GF----------------------- 311
Query: 193 ICAILWPLHL-LAEKLVYKK-IQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
+ + L +A KLV+KK ++ G K VSG +L + + A G+ V GYGL
Sbjct: 312 ----FYNIQLGIARKLVFKKWVEGLGGEIKIIVSGSAALQPRLARVFNATGIVVMEGYGL 367
Query: 251 TESSPVIAA--RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
TE+SPVIA +R G+VG P+++ E+KI AE E+L +G VM G
Sbjct: 368 TETSPVIAVNDKRNGGMRAGTVGRPLSNVEVKI--AEDGEIL---------CKGPNVMLG 416
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
YFK+ TK + +DG+ +T DIG I G L + R K+ S G+ V
Sbjct: 417 YFKDDEKTKSVI-KDGYFHTEDIGKIDED----------GFLHITDRKKEMFKTSGGKYV 465
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE--LSK 426
P LE +S I QI+VIG+ ++ P A I P+ E V A+R IV D++E +
Sbjct: 466 APQMLENTMKQSRFIEQIMVIGEGEKMPAAFIQPNFEFVREWARRKHIVLGDSNEELVKN 525
Query: 427 EKTISLLYGELR-------KWTSKCSFQIGP 450
EK I + E+ KW F++ P
Sbjct: 526 EKVIERISEEVARLNKKFGKWEQIKKFELTP 556
>gi|309750679|gb|ADO80663.1| Probable long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA
synthetase) (LACS) [Haemophilus influenzae R2866]
Length = 607
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 169/370 (45%), Gaps = 48/370 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 225 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 284
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 285 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIPFL-------- 327
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 328 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 380
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 381 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 429
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 430 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 479
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 480 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 539
Query: 429 TISLLYGELR 438
I ++ ELR
Sbjct: 540 DILKMF-ELR 548
>gi|86133145|ref|ZP_01051727.1| long-chain fatty-acid-CoA ligase [Polaribacter sp. MED152]
gi|85820008|gb|EAQ41155.1| long-chain fatty-acid-CoA ligase [Polaribacter sp. MED152]
Length = 592
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 181/392 (46%), Gaps = 63/392 (16%)
Query: 67 VPAENG-DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVP 124
VP E G DK LS LP HV+ER Y G E+ + ++ L ++ Q +P+ M +VP
Sbjct: 209 VPLEKGKDKALSFLPVCHVFERMILYLYQLCGTEIYFAESLEKLTENAQEIKPNVMTAVP 268
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+YE +Y I + S ++ + +++ Y +
Sbjct: 269 RLYEKIYDKIILKGEDLSGVKKSLFFWAVKLGLRYEPY--------------------GA 308
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
W + + + LA KL++ K Q+A+G K VSG +L + + A +
Sbjct: 309 NGWWYEKQLG--------LARKLIFSKWQAALGGELKLMVSGSAALQPRLTRIFAAAEMP 360
Query: 244 VQVGYGLTESSPVIAARRPTCN-----VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+ GYGLTE+SPVI+ +G+VG IN E+KI AE E+L
Sbjct: 361 IMEGYGLTETSPVISVNFVNQGGERGFKVGTVGKVINRVEVKI--AENGEIL-------- 410
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
V+G VMQGY+K P T + L DG+ +TGD G + G L + GR K+
Sbjct: 411 -VKGPNVMQGYYKQPDKTAEVL-RDGYFHTGDKGELDSE----------GYLKITGRTKE 458
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
S G+ V P LE +S LI Q++V+G++++ P AII P+ E + AK I
Sbjct: 459 MFKTSGGKYVIPPLLEGELKQSLLIEQVMVVGENEKMPAAIIQPNFEYLSDWAKSKGISF 518
Query: 419 ADASEL-SKEKTISLLYGELRKWTSKCSFQIG 449
+ EL S EK I+ + ++ KC+ G
Sbjct: 519 GNNEELVSNEKVIA----KYQRTIDKCNEHFG 546
>gi|254292111|ref|ZP_04962885.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
AM-19226]
gi|150421979|gb|EDN13952.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
AM-19226]
Length = 601
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LQQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLRTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|426405050|ref|YP_007024021.1| long-chain fatty acid CoA ligase (AMP-binding) [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425861718|gb|AFY02754.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 593
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 184/401 (45%), Gaps = 56/401 (13%)
Query: 55 MTNFQ----IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLK 109
MT+ Q + + + A D LS LP H+ R + G L + ++ ++
Sbjct: 197 MTHLQAISEVSEAFPLCGATEADTSLSFLPYAHILGRIEHWGHAYIGFTLAFAESLEKMR 256
Query: 110 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 169
+L +P +++SVP ++E +Y+ + QI T ++ +
Sbjct: 257 GNLTEVRPTFLMSVPRIFEKIYAAVTAQIQTQPLKMKIF-------------------NW 297
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
L K Y ++ +++ L + LA+KLV KI +A G + +SGG
Sbjct: 298 ALEVGTKVGDYKMS------GQVLPLDLLVKYELAKKLVLDKIPTAFGGRLRFAISGGAP 351
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
+P I LF+ A GV + GYGLTE++ I P GSVG PI ++KI AE E
Sbjct: 352 IPREIALFFHAAGVLILEGYGLTETTAAITVNTPFNYKFGSVGRPIGEVKLKI--AEDGE 409
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
++ V+ +VM+ Y+KNP ATK+A DGW +TGDIG I P GG
Sbjct: 410 IM---------VKSDKVMKEYYKNPEATKEAFT-DGWFHTGDIGEILP----------GG 449
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 408
L + R KD I + G+ V P LE S I ++V G ++ A++ D+ V
Sbjct: 450 DLKITDRKKDLIKTAGGKYVAPQRLEGLLSLSPYIANVLVHGDQKKYIVALVTLDRPTVE 509
Query: 409 MAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIG 449
AK I ++D + L + ++ L +RK ++ + Q+
Sbjct: 510 NLAKEKQINYSDWNSLVQSPFVAEL---IRKAVAETNTQLA 547
>gi|332160398|ref|YP_004296975.1| putative AMP-binding family protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664628|gb|ADZ41272.1| putative AMP-binding enzyme-family protein [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330859306|emb|CBX69653.1| putative long-chain-fatty-acid--CoA ligase [Yersinia enterocolitica
W22703]
Length = 608
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 174/368 (47%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP HV+ERA +++ G + +Y + N ++ +Q +P M +VP YE
Sbjct: 229 SDDTSLSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVRAAMQAVKPTVMCAVPRFYEK 288
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S I ++ + RR++ R +A +R ++ Q S W
Sbjct: 289 VFSAINDKVALAKWHRRMLFR------WAVGCGERKFQNL----QSGQTS------SWFS 332
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
+ ++ LA++LV K++ +G + + G L +I LF++AIG+ ++ GY
Sbjct: 333 GQ--------MYKLADRLVLSKLRGVLGGKVRFLPAAGARLDDNIILFFQAIGINIKYGY 384
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE+ ++ GS+G P+ E+++ G++ ++VRG VM+G
Sbjct: 385 GMTETCATVSCWEEKDFRFGSIGKPLPGIEVRL-----------GAENEIQVRGPIVMRG 433
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
YF P T ++ EDGWL TGD G + P G L + R KD + S G+ +
Sbjct: 434 YFNKPQETAESFTEDGWLKTGDAGALDPQ----------GNLFITERLKDLMKTSGGKYI 483
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP E + A +++ + D EL +
Sbjct: 484 APQMIEGTLGQDRFIEQIAIIADTRKFVSALIVPCFESLEEYAHSINLKYHDRLELLRHS 543
Query: 429 TISLLYGE 436
I L+ +
Sbjct: 544 HIVSLFEQ 551
>gi|407069899|ref|ZP_11100737.1| long-chain-fatty-acid--CoA ligase [Vibrio cyclitrophicus ZF14]
Length = 602
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 183/403 (45%), Gaps = 55/403 (13%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQ 116
+Q++ + + D L LP HV+ERA ++ +G Y ++D L +
Sbjct: 205 YQLKGHDERLSLTKDDVSLCFLPLSHVFERAWTFYALYKGATNCYLQDTMQVRDALSDVK 264
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M +VP YE ++S I +++ + R+V+ + + + + EG +
Sbjct: 265 PTVMCAVPRFYEKIFSAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQ--EG-------R 315
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 235
PS++ L H LA+KLV K+++ +G + + GG L I
Sbjct: 316 TPSFM---------------LKKSHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGR 360
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ AIG+ V++GYG+TE++ ++ C S+G + E+KI G+K
Sbjct: 361 FFHAIGINVKLGYGMTETTATVSCWDDRCFNPDSIGMSMPGAEVKI-----------GAK 409
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
+ VRG VM+GY+K P T DE G+L TGD G + G L + R
Sbjct: 410 DEILVRGPMVMRGYYKMPEETANTFDEHGFLKTGDAGHFDEN----------GNLFITDR 459
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK L+
Sbjct: 460 IKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELN 519
Query: 416 IVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 450
I + D EL K EK ++ L EL K+ F++ P
Sbjct: 520 IKYHDRVELVKHHQIIEMLEKRVNNLQQELAKFEQVKKFKLLP 562
>gi|419838174|ref|ZP_14361612.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46B1]
gi|421344598|ref|ZP_15795001.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43B1]
gi|422308417|ref|ZP_16395567.1| AMP-binding enzyme family protein [Vibrio cholerae CP1035(8)]
gi|423736135|ref|ZP_17709325.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41B1]
gi|424010468|ref|ZP_17753401.1| AMP-binding enzyme family protein [Vibrio cholerae HC-44C1]
gi|424660979|ref|ZP_18098226.1| AMP-binding enzyme family protein [Vibrio cholerae HE-16]
gi|395940678|gb|EJH51359.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43B1]
gi|408049851|gb|EKG85040.1| AMP-binding enzyme family protein [Vibrio cholerae HE-16]
gi|408617687|gb|EKK90800.1| AMP-binding enzyme family protein [Vibrio cholerae CP1035(8)]
gi|408629107|gb|EKL01820.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41B1]
gi|408856722|gb|EKL96417.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46B1]
gi|408863097|gb|EKM02593.1| AMP-binding enzyme family protein [Vibrio cholerae HC-44C1]
Length = 601
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|153802845|ref|ZP_01957431.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-3]
gi|424592182|ref|ZP_18031606.1| AMP-binding enzyme family protein [Vibrio cholerae CP1037(10)]
gi|124121634|gb|EAY40377.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-3]
gi|408029778|gb|EKG66480.1| AMP-binding enzyme family protein [Vibrio cholerae CP1037(10)]
Length = 601
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETTESFDEQGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|218131878|ref|ZP_03460682.1| hypothetical protein BACEGG_03500 [Bacteroides eggerthii DSM 20697]
gi|217986181|gb|EEC52520.1| AMP-binding enzyme [Bacteroides eggerthii DSM 20697]
Length = 593
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 185/410 (45%), Gaps = 61/410 (14%)
Query: 63 LYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHY 119
++DI DK +SM LP HV+E+A Y RG+++ + +++ ++ +P
Sbjct: 203 IHDIRLTAMTDKDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPADIQTTIKEIRPTL 262
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
M SVP +E +Y+G+Q++I + R+ + I++ +
Sbjct: 263 MCSVPRFWEKVYAGVQEKIAQETGLRKAMMLDAIKVGKMHN------------------- 303
Query: 180 YLVALIDWLWARIICAILWPLHL---LAEKLVYKKIQSAIGISKAGV--SGGGSLPMHID 234
ID+L +L LHL EK +Y ++ IGI + G ++P I
Sbjct: 304 -----IDYLRVGKTPPLL--LHLKYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEIC 356
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 357 EFVHSVGINMIVGYGLTESTATVSCFPDKGYEIGSVGTLMPDVEVKI--GENNEIL---- 410
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+RG + GY++ P AT A+D+DGW +TGD G + H L L
Sbjct: 411 -----LRGKTITTGYYRKPEATADAIDKDGWFHTGDAGHLKDGH-----------LYLTE 454
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KD S G+ V P LE I QI VI ++ A+IVP V AK
Sbjct: 455 RIKDLFKTSNGKYVSPQALETKLAIDRYIDQIAVIADQRKFVSALIVPVYGFVKDYAKEK 514
Query: 415 SIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
+ + D ++L + + L+ R T + F Q+ ++ EPF++
Sbjct: 515 GLEYKDMADLLQHPKVQALF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 563
>gi|153830473|ref|ZP_01983140.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae 623-39]
gi|148874039|gb|EDL72174.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae 623-39]
Length = 601
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETTESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|227488400|ref|ZP_03918716.1| possible long-chain-fatty-acid--CoA ligase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227543012|ref|ZP_03973061.1| possible long-chain-fatty-acid--CoA ligase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227091614|gb|EEI26926.1| possible long-chain-fatty-acid--CoA ligase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227181234|gb|EEI62206.1| possible long-chain-fatty-acid--CoA ligase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 612
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 162/342 (47%), Gaps = 47/342 (13%)
Query: 69 AENGDKFLSMLPPWHVYERACGY-FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 127
A G+ ++ LP HV RA F+ S G + ++ + + +LQR +P+ ++ VP V+
Sbjct: 229 ARPGNSMVTFLPLAHVLARAVSLAFVVSGGTQSHWSNFKTISVELQRNRPNLILGVPRVF 288
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E + + +AA + R I+ + A + + + PS + +
Sbjct: 289 EKVRN---------AAANNALDRGPIQAATFAKAEQVAIDYSKAMDEEDGPSRRLEM--- 336
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQV 246
H + EKL+YKKI+SAIG +SGG ++ + F+ IG+ V
Sbjct: 337 ------------QHSIFEKLIYKKIRSAIGGACNYAISGGSAMSHDLLHFFRGIGIPVYE 384
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE + A NV+G+VG P+ +KI D G + +RG Q+
Sbjct: 385 GYGLTEVAAAAAVNFGKDNVIGTVGQPVGGMAVKIND-----------DGEICLRGEQLF 433
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY++N AT +A D +G+ NTGD+G + G +V+ GR KD IV + G+
Sbjct: 434 TGYWQNDIATAEAFDSEGYFNTGDLGELLDT----------GHIVITGRKKDLIVTAGGK 483
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 408
NV P LE+ LI Q +V+G + +I D++ +L
Sbjct: 484 NVSPGPLEDKLRAHPLISQALVVGDGKPFIAVLIALDEDAML 525
>gi|384425421|ref|YP_005634779.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae LMA3984-4]
gi|327484974|gb|AEA79381.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae LMA3984-4]
Length = 601
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|452751926|ref|ZP_21951671.1| Long-chain-fatty-acid--CoA ligase [alpha proteobacterium JLT2015]
gi|451961145|gb|EMD83556.1| Long-chain-fatty-acid--CoA ligase [alpha proteobacterium JLT2015]
Length = 602
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 164/349 (46%), Gaps = 57/349 (16%)
Query: 64 YDIVPAENG---DKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPH 118
YDI+ + G ++FLS LP H YE G Y G E+ Y+ + L D++ +P
Sbjct: 218 YDILEGDFGIADERFLSFLPLSHAYEHTGGQYLPIMCGAEIFYSRGIDKLAADIEETRPT 277
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M+ VP ++E L I K I A + +R+ KR+ G ++
Sbjct: 278 IMVVVPRLFEVLRQRIMKGIEKQGGAALWLLNQALRL-----GEKRVRRGRLPLTDK--- 329
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 237
PL LL ++ + KK+ +G KA V+GG L + LF+
Sbjct: 330 --------------------PLDLLLDRTIRKKVGQRLGGRLKAMVAGGAPLNPEVGLFF 369
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+++GV + GYG TE++PV++ RP+ + + +VG P+ E++I AE E+L
Sbjct: 370 QSLGVTLLQGYGQTEAAPVVSCNRPSAKIKMHTVGPPLKGIEVRI--AEDGEIL------ 421
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
VRG VM GY+ N + T + L DGWL+TGDIG H G +V+ R
Sbjct: 422 ---VRGELVMHGYWNNEAETARVL-RDGWLHTGDIG----HFDE------DGHIVITDRK 467
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
KD IVL G+NV P +E I Q +V G + ++VPD E
Sbjct: 468 KDLIVLDKGDNVAPQRVEGMLTLQPEIAQAMVAGDKRPYLVGLVVPDME 516
>gi|225352623|ref|ZP_03743646.1| hypothetical protein BIFPSEUDO_04249 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156817|gb|EEG70211.1| hypothetical protein BIFPSEUDO_04249 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 607
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 195/414 (47%), Gaps = 61/414 (14%)
Query: 62 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHY 119
+L++IV E+ + L LP H + R Y + G+ + L DL+ ++P Y
Sbjct: 217 ALHEIV-LEDHPRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTY 275
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++ VP V+E +Y+ ++ T R ++ + A + R+ + ++P+
Sbjct: 276 LLGVPRVFEKVYNAASRKAGTGWKGR-----LFLKAAEAARDWSRMQQA------GERPT 324
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FY 237
A+ I HL E VY+ ++SA+G V+ GG+ P+ + L F+
Sbjct: 325 ----------AKQIAQ-----HLSYEASVYRTVRSALGPRIRYVACGGA-PLDVSLAHFF 368
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
IG+ + GYG+TE++ AA R T NV+G+VG P + ++I D G
Sbjct: 369 NGIGLPMIQGYGMTETAAPFAATRVTDNVIGTVGQPAPGSSVRISD-----------DGE 417
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
++V+G V +GY P T +A EDGWL TGD+ I G + + GR K
Sbjct: 418 LQVKGPNVFRGYHNLPEKTAEAFTEDGWLKTGDLASIDDE----------GRITITGRKK 467
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
D I+ + G+NV P+ +E+ ++ ++ +VV+G ++ GA+I D E + A SI
Sbjct: 468 DIIITAGGKNVSPIPMEQEIVKCPIVEHVVVVGDNRPFIGALITLDPEG--LEAWLPSIG 525
Query: 418 HADASELSKEKTISLLYGELRKWTSKCSFQIGPIH------VVDEPFTVNFLCL 465
+ + L + + ++ E++K+ K + + V+D FT CL
Sbjct: 526 LSADTPLDRVAATAAVHDEIQKYVDKANATVSRAESVRKFVVLDTQFTQENKCL 579
>gi|317474513|ref|ZP_07933787.1| AMP-binding enzyme [Bacteroides eggerthii 1_2_48FAA]
gi|316909194|gb|EFV30874.1| AMP-binding enzyme [Bacteroides eggerthii 1_2_48FAA]
Length = 601
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 185/410 (45%), Gaps = 61/410 (14%)
Query: 63 LYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHY 119
++DI DK +SM LP HV+E+A Y RG+++ + +++ ++ +P
Sbjct: 211 IHDIRLTAMTDKDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPADIQTTIKEIRPTL 270
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
M SVP +E +Y+G+Q++I + R+ + I++ +
Sbjct: 271 MCSVPRFWEKVYAGVQEKIAQETGLRKAMMLDAIKVGKMHN------------------- 311
Query: 180 YLVALIDWLWARIICAILWPLHL---LAEKLVYKKIQSAIGISKAGV--SGGGSLPMHID 234
ID+L +L LHL EK +Y ++ IGI + G ++P I
Sbjct: 312 -----IDYLRVGKTPPLL--LHLKYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEIC 364
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 365 EFVHSVGINMIVGYGLTESTATVSCFPDKGYEIGSVGTLMPDVEVKI--GENNEIL---- 418
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+RG + GY++ P AT A+D+DGW +TGD G + H L L
Sbjct: 419 -----LRGKTITTGYYRKPEATADAIDKDGWFHTGDAGHLKDGH-----------LYLTE 462
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KD S G+ V P LE I QI VI ++ A+IVP V AK
Sbjct: 463 RIKDLFKTSNGKYVSPQALETKLAIDRYIDQIAVIADQRKFVSALIVPVYGFVKDYAKEK 522
Query: 415 SIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
+ + D ++L + + L+ R T + F Q+ ++ EPF++
Sbjct: 523 GLEYKDMADLLQHPKVQALF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 571
>gi|262192691|ref|ZP_06050831.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae CT 5369-93]
gi|262031430|gb|EEY50028.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae CT 5369-93]
Length = 601
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|347755175|ref|YP_004862739.1| Long-chain acyl-CoA synthetase [Candidatus Chloracidobacterium
thermophilum B]
gi|347587693|gb|AEP12223.1| Long-chain acyl-CoA synthetases (AMP-forming) [Candidatus
Chloracidobacterium thermophilum B]
Length = 618
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 170/379 (44%), Gaps = 53/379 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERAC-GYFIFSRGIELMYT-AVRNLKDDLQRYQ 116
+ L D+ P D LS LP HVYER F++S G+ + + +V + +L Q
Sbjct: 222 NVERLTDLGPE---DTALSYLPLSHVYERTVMNVFVYS-GVSVYFAESVDTVAQNLMEVQ 277
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P M SVP ++E + + I+++ + + + + Y+ + ++ G
Sbjct: 278 PTVMTSVPRIFEKILARIEEEGRKAGGLKTKLFTWAMETGREYS--RALHRGNV------ 329
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
P L D +A LV KI++ I K SGG +L +
Sbjct: 330 -PPMLSLQYDIAYA----------------LVLSKIRNKIAPRIKFFSSGGAALAEDVMH 372
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
+ +G+ + GYGLTE+SPVI + N G+VG P+ EIKI A E+L
Sbjct: 373 AFSGMGLTILQGYGLTETSPVITSNTKHENRPGTVGKPLRGVEIKI--APDGEIL----- 425
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
RG VM+GY+ P T + L DGW +TGDIG I G L + R
Sbjct: 426 ----TRGRHVMRGYYNKPDKTAEVLTPDGWFHTGDIGEI----------DADGFLRITDR 471
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
KD S G+ + P +E A + S I Q VV+G ++ PGA+IVP V A+ L
Sbjct: 472 KKDLFKTSGGKYIAPQPIENALVTSPHITQAVVVGNGRKFPGALIVPTPSSVQNLARELG 531
Query: 416 IVHADASELSKEKTISLLY 434
+ +A +EL K I Y
Sbjct: 532 LTNASYAELLKHPKILDFY 550
>gi|153216942|ref|ZP_01950706.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae 1587]
gi|419830916|ref|ZP_14354401.1| AMP-binding enzyme family protein [Vibrio cholerae HC-1A2]
gi|419834601|ref|ZP_14358055.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A2]
gi|422918315|ref|ZP_16952629.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02A1]
gi|423823214|ref|ZP_17717222.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55C2]
gi|423857175|ref|ZP_17721024.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59A1]
gi|423884451|ref|ZP_17724618.1| AMP-binding enzyme family protein [Vibrio cholerae HC-60A1]
gi|423998737|ref|ZP_17741987.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02C1]
gi|424017639|ref|ZP_17757465.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55B2]
gi|424020556|ref|ZP_17760337.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59B1]
gi|424625937|ref|ZP_18064396.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A1]
gi|424630421|ref|ZP_18068703.1| AMP-binding enzyme family protein [Vibrio cholerae HC-51A1]
gi|424634468|ref|ZP_18072566.1| AMP-binding enzyme family protein [Vibrio cholerae HC-52A1]
gi|424637547|ref|ZP_18075553.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55A1]
gi|424641450|ref|ZP_18079330.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A1]
gi|424649523|ref|ZP_18087183.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A1]
gi|443528441|ref|ZP_21094477.1| AMP-binding enzyme family protein [Vibrio cholerae HC-78A1]
gi|124114037|gb|EAY32857.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae 1587]
gi|341635360|gb|EGS60078.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02A1]
gi|408011114|gb|EKG48950.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A1]
gi|408017056|gb|EKG54578.1| AMP-binding enzyme family protein [Vibrio cholerae HC-52A1]
gi|408022056|gb|EKG59285.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A1]
gi|408022492|gb|EKG59701.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55A1]
gi|408031293|gb|EKG67929.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A1]
gi|408053493|gb|EKG88507.1| AMP-binding enzyme family protein [Vibrio cholerae HC-51A1]
gi|408620689|gb|EKK93701.1| AMP-binding enzyme family protein [Vibrio cholerae HC-1A2]
gi|408634322|gb|EKL06585.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55C2]
gi|408639779|gb|EKL11586.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59A1]
gi|408640101|gb|EKL11902.1| AMP-binding enzyme family protein [Vibrio cholerae HC-60A1]
gi|408648734|gb|EKL20069.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A2]
gi|408852179|gb|EKL92023.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02C1]
gi|408858681|gb|EKL98353.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55B2]
gi|408866754|gb|EKM06131.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59B1]
gi|443453260|gb|ELT17091.1| AMP-binding enzyme family protein [Vibrio cholerae HC-78A1]
Length = 601
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|418529723|ref|ZP_13095655.1| AMP-dependent synthetase and ligase [Comamonas testosteroni ATCC
11996]
gi|371453243|gb|EHN66263.1| AMP-dependent synthetase and ligase [Comamonas testosteroni ATCC
11996]
Length = 649
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 170/355 (47%), Gaps = 43/355 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H +ER GY++ + G + Y +V L D+++ +P +ISVP +YE +
Sbjct: 257 DVFLSFLPLSHTFERTAGYYLAVATGSCVAYARSVAQLAQDMKQVRPTVLISVPRIYERV 316
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +Q+ + +S ++ A+ + ++ FC + L A W
Sbjct: 317 YAKVQESLASSPLKHKLFDEAV----------NKGWKSFCAHQGMHLGEQLDAKASW--- 363
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
A + P LL KLV + + + G + VSGG L I + +G+ + GYG
Sbjct: 364 ----ASVLPGWLL-RKLVAQPLLAQFGGRLRVAVSGGAPLSPTIARTFLGLGLPMVQGYG 418
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
+TE++PV++A N +VG + E++I G ++V G VM+GY
Sbjct: 419 MTETAPVVSANGLDDNWPDTVGRVLPGIEVRI-----------GEDQELQVSGPVVMRGY 467
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ P T +A DGWL TGD I GR R ++GR K+ IV STGE V
Sbjct: 468 WNRPEDTAKAFTADGWLRTGDQASI----EDGRIR-------IKGRIKEIIVTSTGEKVP 516
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 424
P ++E+A L L Q+ V+G+D+ I V + E M A+ + + D S L
Sbjct: 517 PNDVEQAILVDPLFEQVFVVGEDRPFIACIAVVSQMEWEMLARSVGLNPKDGSSL 571
>gi|344343202|ref|ZP_08774071.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
gi|343805133|gb|EGV23030.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
Length = 649
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 161/335 (48%), Gaps = 50/335 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H+ ER Y++ G + Y ++ L +DLQ +P MI+VP V+E +
Sbjct: 270 DVFLSFLPLSHMLERTGSYYLPMMAGSRVAYARSIGQLAEDLQTIRPTAMIAVPRVFERV 329
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y I Q+ R AR L + A A R +E R Q + + WL
Sbjct: 330 YQRILDQL----DKRPKPARWLFNAAVA--AGWRTFE-----REQGRAGWH----PWL-- 372
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
++WPL L K+ Q G +A VSGG L + + +GV + GYGL
Sbjct: 373 -----LVWPL--LRRKVALPVQQRLGGRLRATVSGGAPLSTEVARTFIGLGVPLLQGYGL 425
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE+SPVI+ N+ SVG P+ +++I G + + VRG M GY+
Sbjct: 426 TETSPVISFNTLQSNIPASVGVPLRGLQVRI-----------GPESELLVRGDNTMLGYW 474
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
N +AT + L +DGWL+TGD I +H + + GR KD +VLS GE V P
Sbjct: 475 NNHAATAKMLAQDGWLHTGDQARIEDNH-----------IYITGRIKDILVLSNGEKVPP 523
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIV--PD 403
++E A L Q+VV+G+ Q A++V PD
Sbjct: 524 GDMELAIALDPLFDQVVVLGEGQSYLSALLVLNPD 558
>gi|256824009|ref|YP_003147969.1| AMP-forming long-chain acyl-CoA synthetase [Kytococcus sedentarius
DSM 20547]
gi|256687402|gb|ACV05204.1| AMP-forming long-chain acyl-CoA synthetase [Kytococcus sedentarius
DSM 20547]
Length = 606
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 170/375 (45%), Gaps = 51/375 (13%)
Query: 59 QIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 116
++ + Y +P E+ L LP HV+ R + + G +T + + DL ++
Sbjct: 210 EVTAAYQGLPELFEDDSSTLLFLPLAHVFGRMVHFAVIGAGARTGHTDIARVAKDLPVFK 269
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P ++++VP V+E +Y + T ++ A A Q
Sbjct: 270 PTFVLAVPRVFEKIYESAHLKA-TKGGKEKIFAAA----------------------TQT 306
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDL 235
Y AL A + +L H L KLVY K+Q+A G +SGG +L +
Sbjct: 307 AIDYSKALD----AGRVPLVLRAKHKLFTKLVYGKVQAAFGGELTWAISGGAALGERLGH 362
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
++ +GV + G+GLTE+S RP+ +G+VG P+ E ++ D +
Sbjct: 363 YFRGMGVNIMEGWGLTETSAAATVNRPSMQKIGTVGVPLPGFEARLSD-----------E 411
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G ++VRG V GY NP T + L EDGW +TGD+G I G L + GR
Sbjct: 412 GEIQVRGGHVFAGYENNPEETAKVLAEDGWFSTGDLGEIDDD----------GFLRIIGR 461
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
AKD +V + G+NV P LE+ L+ + +V+G + A+I D+E++ K
Sbjct: 462 AKDILVTAAGKNVAPGPLEDILRSHRLVSEAMVVGDGRPTVMALITLDEEQLPEWLKHHH 521
Query: 416 IVHADASELSKEKTI 430
ASEL++++ +
Sbjct: 522 REVVPASELTEDEQV 536
>gi|452911717|ref|ZP_21960383.1| Long-chain-fatty-acid--CoA ligase [Kocuria palustris PEL]
gi|452833119|gb|EME35934.1| Long-chain-fatty-acid--CoA ligase [Kocuria palustris PEL]
Length = 602
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 161/344 (46%), Gaps = 63/344 (18%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYE 128
+ G + + LP HV+ R + G + YTA ++NL DLQ + P +++ VP V+E
Sbjct: 221 QEGRRTVMFLPLAHVFARYVSILTVAGGCTMAYTADMKNLLPDLQSFHPDFLLVVPRVFE 280
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+ Q++ + F R A +
Sbjct: 281 KVYNSAQQKAEAGGRGK---------------IFDR-----------------AAAVSIA 308
Query: 189 WARIICAILWPL-----HLLAEKLVYKKIQSAIG--ISKAGVSGGGSLPMHIDLFYEAIG 241
W+R A PL H + ++LVY K++ A+G ++ A VSGGG L + F+ +G
Sbjct: 309 WSRAEQAGKVPLGLKIQHAIFDRLVYAKLREAMGGKVTHA-VSGGGPLGERLAHFFHGVG 367
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 301
+ V GYGLTE++ PT +GSVG P+ ++I D G V+ +
Sbjct: 368 LMVLEGYGLTETTAPQTVNTPTALRIGSVGRPLPGNAVRITDM-----------GEVQAK 416
Query: 302 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 361
G VM+GY+ +P T++A EDGW TGD+G + G L + GR K+ IV
Sbjct: 417 GIAVMRGYWNSPEKTEEAF-EDGWFRTGDLGELDDD----------GYLRITGRIKELIV 465
Query: 362 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+ G+NV P+ LE+ +L+ Q + +G ++ A+I D+E
Sbjct: 466 TAGGKNVSPVVLEDQIRAHTLVSQCIAVGDNRPFIAALITLDEE 509
>gi|237720321|ref|ZP_04550802.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|336415414|ref|ZP_08595754.1| hypothetical protein HMPREF1017_02862 [Bacteroides ovatus
3_8_47FAA]
gi|423290471|ref|ZP_17269320.1| hypothetical protein HMPREF1069_04363 [Bacteroides ovatus
CL02T12C04]
gi|423294228|ref|ZP_17272355.1| hypothetical protein HMPREF1070_01020 [Bacteroides ovatus
CL03T12C18]
gi|229450072|gb|EEO55863.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|335941010|gb|EGN02872.1| hypothetical protein HMPREF1017_02862 [Bacteroides ovatus
3_8_47FAA]
gi|392665858|gb|EIY59381.1| hypothetical protein HMPREF1069_04363 [Bacteroides ovatus
CL02T12C04]
gi|392675419|gb|EIY68860.1| hypothetical protein HMPREF1070_01020 [Bacteroides ovatus
CL03T12C18]
Length = 604
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 185/398 (46%), Gaps = 57/398 (14%)
Query: 73 DKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP +E
Sbjct: 221 DKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + IR+ RI+ +D+L
Sbjct: 281 VYAGVQEKINETTGLKKALMLDAIRVG-------RIHN-----------------LDYLR 316
Query: 190 ARIICAILWPL-HLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQV 246
++ L + EK +Y ++ IGI + G ++P I+ F ++G+ + V
Sbjct: 317 LGKTPPVMNQLKYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVV 376
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 377 GYGLTESTATVSCTLPVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTIT 425
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GY+K AT A++ DGW +TGD G+ G L L R KD S G+
Sbjct: 426 KGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGK 474
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
V P LE + I QI +I ++ A+IVP V AK I + D +EL +
Sbjct: 475 YVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELLQ 534
Query: 427 EKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F QI ++ EPF++
Sbjct: 535 HPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|373958206|ref|ZP_09618166.1| AMP-dependent synthetase and ligase [Mucilaginibacter paludis DSM
18603]
gi|373894806|gb|EHQ30703.1| AMP-dependent synthetase and ligase [Mucilaginibacter paludis DSM
18603]
Length = 637
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 170/362 (46%), Gaps = 50/362 (13%)
Query: 59 QIRSLYDIVPAENGDK-FLSMLPPWHVYERACGYFI-FSRGIELMYTAVRNL-KDDLQRY 115
+R D +P + D+ FLS LP HV+ER Y + ++G ++ + +L ++
Sbjct: 218 NVRVCLDQIPVIDKDETFLSFLPLSHVFERTATYHVCLAKGCKIAFAQSLDLLAKNMGEV 277
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
+P M VP + E ++ K ++ + + + I Y +
Sbjct: 278 KPTVMNCVPRLLERIHDKAMKNGTSAGGTKTKIFLWALEIGKKYR---------LVQEAG 328
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 234
K+P + IL H +A+KLV+ KI+ G K +SGGG+LP +I
Sbjct: 329 KKPGF---------------ILQQQHKIADKLVFSKIKEKTGGRLKFMISGGGALPKNIG 373
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---- 290
F+ +G+K+ G+GLTE+SPV++ V G+VG I E+ I + +T +
Sbjct: 374 EFFGDLGIKILEGFGLTETSPVMSVTEYHRQVYGTVGRIIPGIEVAIQNVDTGYIYSIQT 433
Query: 291 -----PA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 343
PA +G + VRG VM+GY+ P T A+D DGW +TGDIG
Sbjct: 434 HESFNPAFQSEEGEIIVRGHCVMKGYWNKPQETAVAIDVDGWFHTGDIG----------- 482
Query: 344 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
R G L + R K+ +V + G+NV P +E L+S I + ++G + AI++P
Sbjct: 483 RFFKGNLQITDRLKNMLVNAYGKNVYPTPVENTYLKSPKIEGLFLVGDKREYITAIVIPA 542
Query: 404 KE 405
+E
Sbjct: 543 RE 544
>gi|386311332|ref|YP_006007388.1| long-chain-fatty-acid--CoA ligase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|433551437|ref|ZP_20507479.1| Long-chain-fatty-acid--CoA ligase [Yersinia enterocolitica IP
10393]
gi|318607143|emb|CBY28641.1| long-chain-fatty-acid--CoA ligase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|431787619|emb|CCO70519.1| Long-chain-fatty-acid--CoA ligase [Yersinia enterocolitica IP
10393]
Length = 608
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 174/368 (47%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP HV+ERA +++ G + +Y + N ++ +Q +P M +VP YE
Sbjct: 229 SDDTSLSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVRAAMQAVKPTVMCAVPRFYEK 288
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S I ++ + RR++ R +A +R ++ Q S W
Sbjct: 289 VFSAINDKVALAKWHRRMLFR------WAVGCGERKFQNL----QSGQTS------SWFS 332
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
+ ++ LA++LV K++ +G + + G L +I LF++AIG+ ++ GY
Sbjct: 333 EQ--------MYKLADRLVLSKLRGVLGGKVRFLPAAGARLDDNIILFFQAIGINIKYGY 384
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE+ ++ GS+G P+ E+++ G++ ++VRG VM+G
Sbjct: 385 GMTETCATVSCWEEKDFRFGSIGKPLPGIEVRL-----------GAENEIQVRGPIVMRG 433
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
YF P T ++ EDGWL TGD G + P G L + R KD + S G+ +
Sbjct: 434 YFNKPQETAESFTEDGWLKTGDAGALDPQ----------GNLFITERLKDLMKTSGGKYI 483
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP E + A +++ + D EL +
Sbjct: 484 APQMIEGTLGQDRFIEQIAIIADTRKFVSALIVPCFESLEEYAHSINLKYHDRLELLRHS 543
Query: 429 TISLLYGE 436
I L+ +
Sbjct: 544 HIVSLFEQ 551
>gi|256375521|ref|YP_003099181.1| AMP-dependent synthetase and ligase [Actinosynnema mirum DSM 43827]
gi|255919824|gb|ACU35335.1| AMP-dependent synthetase and ligase [Actinosynnema mirum DSM 43827]
Length = 602
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 165/351 (47%), Gaps = 53/351 (15%)
Query: 59 QIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRY 115
+IR ++P + G+ L LP H+ R + + +T VR L +DL +
Sbjct: 212 EIREAVTLMPHLLQAGNTLLVFLPLAHILARVLALCALYTRVTVGHTQDVRKLVEDLGTF 271
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
+P ++++VP V+E +Y+G KQ + ++ A A TA + +
Sbjct: 272 RPTFVVAVPRVFEKVYNG-AKQKAEAEGKGKIFAIA------EATAVE-----YSRAEET 319
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHID 234
P L+ + H + +KLVY+++++A+G A VSGG L +
Sbjct: 320 GGPGLLLKV---------------KHAVFDKLVYRRLKAALGGRCIAAVSGGAPLGERLA 364
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ IGV V GYGLTE++ T +G+VG P+ T ++I G
Sbjct: 365 HFFRGIGVPVMEGYGLTETTAAACLNTATAVRVGTVGKPVGGTSVRI-----------GE 413
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
G V ++G V + Y+ NP AT++AL EDGW +TGDIG + G L + G
Sbjct: 414 DGEVLIKGDVVFRSYWDNPKATEEAL-EDGWFHTGDIGEL----------DADGFLKITG 462
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
R K+ IV + G+NV P LE+ LI Q +VIG Q GA+I D E
Sbjct: 463 RKKEIIVTAGGKNVSPAVLEDRLRAHPLISQCMVIGDAQPFIGALITIDPE 513
>gi|238786709|ref|ZP_04630510.1| long-chain-fatty-acid--CoA ligase [Yersinia frederiksenii ATCC
33641]
gi|238725077|gb|EEQ16716.1| long-chain-fatty-acid--CoA ligase [Yersinia frederiksenii ATCC
33641]
Length = 599
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 173/366 (47%), Gaps = 47/366 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 131
D LS LP HV+ERA +++ G + +Y + + ++ +Q +P M +VP YE ++
Sbjct: 222 DVSLSFLPLSHVFERAWSFYVMHTGAQNVYISNTDWVRAAMQATKPTVMCAVPRFYEKVF 281
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I ++ + RR++ R I S F+ + G L+ +Q
Sbjct: 282 SAIHDKVALAKWHRRLLFRWAIGCS--ERQFQSLQNGQTLSPLSRQ-------------- 325
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
++ LA++LV K++ +G + + G L +I LF+++IG+ ++ GYG+
Sbjct: 326 --------MYKLADRLVLSKLRGILGGKVRFLPAAGARLDDNIILFFQSIGINIKYGYGM 377
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE+ ++ GS+G P+ E+++ G++ ++VRG VM+GYF
Sbjct: 378 TETCATVSCWEEKDFCFGSIGKPLPGIEVRL-----------GAENEIQVRGQIVMRGYF 426
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P T ++ EDGWL TGD G + G L + R KD + S G+ + P
Sbjct: 427 NKPQETAESFTEDGWLKTGDAGALDTQ----------GNLFITERLKDLMKTSGGKYIAP 476
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + I QI +I ++ A+IVP E + A+ +++ + D EL + I
Sbjct: 477 QMIEGTLGQDRFIEQIAIIADTRKFVSALIVPCFESLEEYARSINLKYHDRLELLRHSHI 536
Query: 431 SLLYGE 436
L+ +
Sbjct: 537 VALFEQ 542
>gi|418240075|ref|ZP_12866618.1| putative AMP-binding enzyme-family protein [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
gi|351780578|gb|EHB22648.1| putative AMP-binding enzyme-family protein [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
Length = 599
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 174/368 (47%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP HV+ERA +++ G + +Y + N ++ +Q +P M +VP YE
Sbjct: 220 SDDTSLSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVRAAMQAVKPTVMCAVPRFYEK 279
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S I ++ + RR++ R +A +R ++ Q S W
Sbjct: 280 VFSAINDKVALAKWHRRMLFR------WAVGCGERKFQNL----QSGQTS------SWFS 323
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
+ ++ LA++LV K++ +G + + G L +I LF++AIG+ ++ GY
Sbjct: 324 EQ--------MYKLADRLVLSKLRGVLGGKVRFLPAAGARLDDNIILFFQAIGINIKYGY 375
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE+ ++ GS+G P+ E+++ G++ ++VRG VM+G
Sbjct: 376 GMTETCATVSCWEEKDFRFGSIGKPLPGIEVRL-----------GAENEIQVRGPIVMRG 424
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
YF P T ++ EDGWL TGD G + P G L + R KD + S G+ +
Sbjct: 425 YFNKPQETAESFTEDGWLKTGDAGALDPQ----------GNLFITERLKDLMKTSGGKYI 474
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP E + A +++ + D EL +
Sbjct: 475 APQMIEGTLGQDRFIEQIAIIADTRKFVSALIVPCFESLEEYAHSINLKYHDRLELLRHS 534
Query: 429 TISLLYGE 436
I L+ +
Sbjct: 535 HIVSLFEQ 542
>gi|264678464|ref|YP_003278371.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
gi|262208977|gb|ACY33075.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
Length = 649
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 186/393 (47%), Gaps = 43/393 (10%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H +ER GY++ + G + Y +V L D+++ +P +ISVP +YE +
Sbjct: 257 DVFLSFLPLSHTFERTAGYYLAVATGSCVAYARSVAQLAQDMKQVKPTVLISVPRIYERV 316
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +Q+ + +S ++ A+ + ++ A + + G + + + S+ AL WL
Sbjct: 317 YAKVQESLASSPFKHKLFDAAVNKGWKSFCAHQGMPLG---EQPEAKASWASALPGWLLR 373
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
+++ L L +L + VSGG L I + +G+ + GYG+
Sbjct: 374 KLVAQPL--LAQFGGRL------------RVAVSGGAPLSPTIARTFLGLGLPMVQGYGM 419
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++PV++A N +VG + E++I D + ++V G VM+GY+
Sbjct: 420 TETAPVVSANGLDDNWPDTVGRVLPGIEVRIGDDQE-----------LQVSGQVVMRGYW 468
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P T +A DGWL TGD I GR R ++GR K+ IV STGE V P
Sbjct: 469 NRPEDTAKAFTADGWLRTGDQASI----ENGRIR-------IKGRIKEIIVTSTGEKVPP 517
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
++E+A L L Q+ V+G+D+ I V + E M A+ + + D S L
Sbjct: 518 NDVEQAILVDPLFEQVFVVGEDRPFIACIAVVGQVEWEMLARSVGLNPNDVSSLQHAAAE 577
Query: 431 SLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 461
+ + T + P IH+V + + ++
Sbjct: 578 REALARIERQTRSFARYAVPRAIHLVRDSWNID 610
>gi|297581107|ref|ZP_06943032.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|417821798|ref|ZP_12468412.1| AMP-binding enzyme family protein [Vibrio cholerae HE39]
gi|423958046|ref|ZP_17735514.1| AMP-binding enzyme family protein [Vibrio cholerae HE-40]
gi|423985757|ref|ZP_17739070.1| AMP-binding enzyme family protein [Vibrio cholerae HE-46]
gi|297534933|gb|EFH73769.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|340039429|gb|EGR00404.1| AMP-binding enzyme family protein [Vibrio cholerae HE39]
gi|408656122|gb|EKL27224.1| AMP-binding enzyme family protein [Vibrio cholerae HE-40]
gi|408663415|gb|EKL34290.1| AMP-binding enzyme family protein [Vibrio cholerae HE-46]
Length = 601
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|452960023|gb|EME65353.1| long-chain fatty-acid--CoA ligase [Rhodococcus ruber BKS 20-38]
Length = 600
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 173/360 (48%), Gaps = 54/360 (15%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYET 129
+G + L LP HV+ R + F G+ + +T+ + L D L ++P++++SVP V+E
Sbjct: 225 SGKRTLLFLPLAHVFAREISFGAFEHGVTVAHTSDLTTLLDQLGEFKPNFILSVPRVFEK 284
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ +++ + + + I+++ A + G L
Sbjct: 285 VYNSAKQKAYDGGKGKIFEKASDTAIAYS-EALDKGGAGLGLKIK--------------- 328
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
H + +KLVY K+++A+G + VSGG +L + F+ +G+ + GY
Sbjct: 329 -----------HFVFDKLVYSKLRAALGGECEQAVSGGAALGARLGHFFRGVGIPIYEGY 377
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTE++ + P +GSVG P+N +I AE E+L ++G V G
Sbjct: 378 GLTETTGGVTLNTPEHQRVGSVGRPVNGHAARI--AEDGELL---------LKGPAVFGG 426
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+KN AT +++ DGW +TGDIG I G + + GR K+ IV + G+NV
Sbjct: 427 YWKNEKATAESI-VDGWFHTGDIGTIDED----------GFVHITGRKKELIVTAGGKNV 475
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA--SELSK 426
P LE+A LI Q++V+G + GA+I D E + R I ADA SEL K
Sbjct: 476 APAVLEDALRAHPLISQVIVVGDAKPFIGALITLDPEALPGWKDRHGIA-ADAPVSELLK 534
>gi|381201314|ref|ZP_09908442.1| long-chain-fatty-acid--CoA ligase [Sphingobium yanoikuyae XLDN2-5]
Length = 592
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 166/341 (48%), Gaps = 60/341 (17%)
Query: 72 GDK-FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 128
GD+ FLS LP H YE + G F+ G ++ Y + L +++ +P M+ VP ++E
Sbjct: 220 GDEVFLSFLPLSHAYEHSGGQFLPMLLGGQIYYAEGLEKLASNIEEARPTIMVVVPRLFE 279
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
L + I K I + +RI+ + Q+ S +V L
Sbjct: 280 VLRTRIIKSIEKQGKFPTYLLNQALRIA---------------AKEQQGKSSIVDL---- 320
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
P+ L + + KI++ G KA VSGG L + LF+EA+G+ + G
Sbjct: 321 ----------PMKALLSRTLIPKIRARFGGRMKALVSGGAPLNPDVGLFFEAMGLMLLQG 370
Query: 248 YGLTESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
YG TE+ PVI+ RP + + +VG P++ E+KI AE E+L VRG VM
Sbjct: 371 YGQTEAGPVISCNRPAAGIAMDTVGPPLDGVEVKI--AEDGEIL---------VRGELVM 419
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY++NP+ T++ L +DGWL+TGDIG I RGR R + R KD IV G+
Sbjct: 420 HGYWRNPAETEKVL-KDGWLHTGDIGEI---DDRGRIR-------ITDRKKDLIVNDKGD 468
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPG--AIIVPDKE 405
NV P ++E I Q +V G RRP ++VPD E
Sbjct: 469 NVSPQKVEGMLTLQPEIGQAMVYG--DRRPHLVGLLVPDSE 507
>gi|305667354|ref|YP_003863641.1| putative long chain fatty-acid CoA ligase [Maribacter sp. HTCC2170]
gi|88709402|gb|EAR01635.1| probable long chain fatty-acid CoA ligase [Maribacter sp. HTCC2170]
Length = 590
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 183/397 (46%), Gaps = 63/397 (15%)
Query: 67 VPAENGD-KFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVP 124
VP NG+ K LS LP HV+ER Y G+E+ + ++ + ++L+ +P+ M +VP
Sbjct: 209 VPLRNGNSKALSFLPVCHVFERMILYLYQYCGVEIYFAESLEKMTENLKEVRPNVMTAVP 268
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+YE +Y I + + ++ + + + Y +
Sbjct: 269 RLYEKVYDKIVTKGSDLTGLKKAIFFWAVDVGLKYEPY--------------------GA 308
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
WL+ + + LA KL++ K Q A+G + + VSG +L + + A G+
Sbjct: 309 NGWLYEQKLK--------LARKLIFSKWQEALGGNLELMVSGSAALQARLTRIFAAAGMP 360
Query: 244 VQVGYGLTESSPVIAARRPTCN--VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 301
+ GYGLTE+SPV++ T +G+VG I++ E+KI D G + V+
Sbjct: 361 IMEGYGLTETSPVVSVNDQTNGGFRIGTVGRVIDNVEVKIAD-----------DGEILVK 409
Query: 302 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 361
G VMQGY+K+P T + D + +TGDIG I G L + R K+
Sbjct: 410 GPNVMQGYYKDPEKTASVMTGD-YFHTGDIGEI----------DSDGFLKITDRKKEMFK 458
Query: 362 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 421
S G+ V P +E +S I Q++V+G+ ++ P A+I PD + + KR + +
Sbjct: 459 TSGGKYVAPALIENQLKQSRFIEQVMVVGEGEKMPAALIQPDFDFLKEWGKRHDLNFENM 518
Query: 422 SE-LSKEKTISLLYGELR-------KWTSKCSFQIGP 450
+E +S E+ ++ E+ KW F++ P
Sbjct: 519 TEVVSHEQVVNRFQEEIDLANEYFAKWEKVKMFKLTP 555
>gi|359768237|ref|ZP_09272013.1| long-chain fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
gi|359314325|dbj|GAB24846.1| long-chain fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
Length = 594
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 159/336 (47%), Gaps = 52/336 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G L LP HV+ R G+ L +T + NL DDL ++P+Y++SVP V+E +
Sbjct: 221 GKSTLLFLPLAHVFARVVAVGCVENGVILGHTNDIPNLIDDLAVFKPNYVLSVPRVFEKV 280
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +++ + A I ++ A ++ G LT
Sbjct: 281 YNSAKQKAYDGGKGSIFDKAADTAIEYS-KATEKGSAGLVLTIK---------------- 323
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYG 249
H + + LVY K+++A+G + G +SGG L + F+ +G+ V GYG
Sbjct: 324 ----------HKIFDALVYNKLRAALGGNCEGAISGGAPLGARLGHFFRGVGIPVYEGYG 373
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
L+E++ + A +GSVG P+ + I AE EVL ++G V GY
Sbjct: 374 LSETTAAVTANNEDHQRVGSVGRPVPGVSVAI--AEDGEVL---------LKGPVVFTGY 422
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ NP AT +A+ +D W +TGDIG R G L + GR K+ IV + G+NV
Sbjct: 423 WHNPEATAEAIHDD-WFHTGDIG-----------RLEDGYLYITGRKKELIVTAGGKNVS 470
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P +LE+A ++ Q +V+G ++ GA+I D E
Sbjct: 471 PAQLEDAIRAHPMVSQCLVVGDNKPFIGALITIDPE 506
>gi|386867536|ref|YP_006280530.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|385701619|gb|AFI63567.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
animalis ATCC 25527]
Length = 606
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 159/350 (45%), Gaps = 52/350 (14%)
Query: 61 RSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFS--RGIELMYTAVRNLKDDLQRYQ 116
R+ D VP + + L LP H + R YF F+ G+ + + L D+Q ++
Sbjct: 212 RAAADCVPEVLDGNARLLLFLPLAHCFARFIQYFAFTFDAGVIGYLPSTKTLPHDMQVFE 271
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P ++++VP V+E +Y+ ++ R + A++ + FA + G T QK
Sbjct: 272 PTFVLAVPRVFEKVYNAASRKAGIGWKGR-LFAKS---VEFAREWTEMEQAGIAPTAKQK 327
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
H + EKLVY I+SA G K GG L ++
Sbjct: 328 AE----------------------HAMYEKLVYSTIRSAFGPRIKYLACGGAPLDRNLAT 365
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ IG+ + GYGLTE++ A R NV+G+VG P+ + ++I
Sbjct: 366 FFNGIGLTMIQGYGLTETAAPFAFTRVHDNVIGTVGQPVPGSSVRI-----------SPT 414
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G ++VRG V GY P T + EDGWL TGD+ I G + L GR
Sbjct: 415 GELEVRGQNVFLGYHNLPEKTAETFAEDGWLKTGDLASIDDE----------GHITLTGR 464
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+KD I+ + G+NV P+ +E+ ++ VV+G ++ GA+I D+E
Sbjct: 465 SKDIIITAGGKNVSPIPMEQEISTCPIVEHAVVVGDNRPFVGAVITLDQE 514
>gi|421352186|ref|ZP_15802551.1| AMP-binding enzyme family protein [Vibrio cholerae HE-25]
gi|395952631|gb|EJH63245.1| AMP-binding enzyme family protein [Vibrio cholerae HE-25]
Length = 601
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKDLNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|209966229|ref|YP_002299144.1| long-chain acyl-CoA synthetase [Rhodospirillum centenum SW]
gi|209959695|gb|ACJ00332.1| long-chain-fatty-acid--CoA ligase, putative [Rhodospirillum
centenum SW]
Length = 825
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 170/357 (47%), Gaps = 58/357 (16%)
Query: 75 FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP H YE +CG +F S G E+ Y V + +L +P ++ VP + E +
Sbjct: 455 FLSCLPLSHAYEHSCGQFFPISLGAEIAYVEGVEKIGTNLNEVKPSIVLVVPRLMEVVQQ 514
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I +++ V L ++ A +R G L +W +
Sbjct: 515 RITREVERQGG----VKERLFNLALAL-GKERYRNGGTLP---------------VWKQ- 553
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
P+ L E +V K++ +G KA VSGG +L + LF+ A+G + GYG T
Sbjct: 554 ------PVDDLMETMVRAKVREKLGGRIKALVSGGAALNPDVGLFFHALGFPLLQGYGQT 607
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E++P+I+ R +VG P+ E+ I AE E+L RG VM GY++
Sbjct: 608 EAAPLISVNRFGMTAHHTVGPPVKGCEVTI--AEDGEIL---------ARGPNVMLGYWQ 656
Query: 312 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 371
+PS+T++AL DGWL+TGD+G + SRGR +V+ R KD +V S G+N+ P
Sbjct: 657 DPSSTERAL-ADGWLHTGDVGHL---DSRGR-------IVITDRKKDILVTSGGDNISPA 705
Query: 372 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR------LSIVHADAS 422
+E + I Q VV G + A++VPD E A+R LS + ADA
Sbjct: 706 RVEGCLMLEPEIAQAVVCGDKRPYIVALLVPDAEIAAEWARRRGLPPDLSTLCADAG 762
>gi|299147218|ref|ZP_07040283.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 3_1_23]
gi|298514496|gb|EFI38380.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 3_1_23]
Length = 604
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 185/398 (46%), Gaps = 57/398 (14%)
Query: 73 DKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP +E
Sbjct: 221 DKDVSMNFLPLTHVFEKAWCYLCIHKGVQVCINLRPADIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + IR+ RI+ +D+L
Sbjct: 281 VYAGVQEKINETTGLKKALMLDAIRVG-------RIHN-----------------LDYLR 316
Query: 190 ARIICAILWPL-HLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQV 246
++ L + EK +Y ++ IGI + G ++P I+ F ++G+ + V
Sbjct: 317 LGKTPPVMNQLKYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVV 376
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 377 GYGLTESTATVSCTLPVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTIT 425
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GY+K AT A++ DGW +TGD G+ G L L R KD S G+
Sbjct: 426 KGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGK 474
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
V P LE + I QI +I ++ A+IVP V AK I + D +EL +
Sbjct: 475 YVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELLQ 534
Query: 427 EKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F QI ++ EPF++
Sbjct: 535 HPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|448350459|ref|ZP_21539272.1| AMP-dependent synthetase and ligase [Natrialba taiwanensis DSM
12281]
gi|445636729|gb|ELY89889.1| AMP-dependent synthetase and ligase [Natrialba taiwanensis DSM
12281]
Length = 680
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 183/395 (46%), Gaps = 59/395 (14%)
Query: 59 QIRSLYDIVPAENGD--------KFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-L 108
QIR + P + D + +S LP HV+ER G+F+ F+ G + Y + L
Sbjct: 243 QIRKRFAPRPDRDADVPVIDAESQAMSYLPLAHVFERTAGHFLLFASGACVAYAENPDTL 302
Query: 109 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 168
++D QP+ SVP VYE +Y I++Q S +R+ A + AY
Sbjct: 303 QEDFSIVQPNTATSVPRVYEKIYDTIREQASESPVKKRLFEWA-TDVGVAY--------- 352
Query: 169 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 227
+ P +L LA+KLV+ ++ A+G ++ +SGGG
Sbjct: 353 ----QRADSPG---------------PVLAAKQALADKLVFSTVREALGGEIESLISGGG 393
Query: 228 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA--E 285
SL + Y A+G+ + GYGLTE+SPVIA P +G++G + +I I ++ +
Sbjct: 394 SLSPELCRLYHAMGLPIFEGYGLTETSPVIAVNPPDDPRIGTIGPTLTDVDISIDESVVD 453
Query: 286 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL------DEDGWLNTGDIGWIAPHHS 339
+ G+ G + VRG V +GY+ P+AT +A D L+ D G I
Sbjct: 454 QDAFDDPGAVGELLVRGPNVTEGYWNMPAATDRAFTEAVADDAAETLSQPDGGAILDTTD 513
Query: 340 RGRSR---RCGGVLVLEG--------RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 388
+ R G V+ L G R K +VLSTG+NV P LE+A S +I Q +V
Sbjct: 514 DSTAEQWFRTGDVVHLRGDNYIEFRDRVKQLLVLSTGKNVAPGPLEDAFAASEVIEQCMV 573
Query: 389 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
+G ++ GA++VP+ E + A I D ++
Sbjct: 574 VGDGEKFIGALLVPNIEHIRTWADEQGIDLPDDTD 608
>gi|291513979|emb|CBK63189.1| Long-chain acyl-CoA synthetases (AMP-forming) [Alistipes shahii WAL
8301]
Length = 635
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 193/408 (47%), Gaps = 62/408 (15%)
Query: 74 KFLSMLPPWHVYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISV 123
+ L +LP H + G++I G M T ++N+ +++ QPH+++SV
Sbjct: 218 RTLIILPLDHCFAHVVGFYIMIACGASVATVQIGATPMET-LKNIPQNIREVQPHFLLSV 276
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P + + I+ I + +R ++AY + +G+
Sbjct: 277 PALAKNFRKNIESSIRAKGRFTEALFNLALRTAYAYNS-----DGYGRGSG--------- 322
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGV 242
W RI+ A P+ + + L+++K++ A G GGG+L + F+ AIG+
Sbjct: 323 -----W-RIVLA---PVVGIFDALLFRKVRQAFGGHLEFFVGGGALLDAELQRFFYAIGI 373
Query: 243 KVQVGYGLTESSPVIAARRPTCN--VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
+ GYGL+E++PVI+ P + GS G + ++KI+D E EV P G KG + V
Sbjct: 374 PMFQGYGLSEATPVISTNSPKHHWHRFGSSGKILIPLDLKILDEEGREV-PRGQKGEIVV 432
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 360
RG VM GY+KNP AT + + DGWL+TGD+G+++ L + GR K +
Sbjct: 433 RGENVMAGYWKNPGATAETV-RDGWLHTGDMGYVSEDD----------FLYVLGRFKSLL 481
Query: 361 VLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
+ S GE P +EEA + +S I QI+V GAI+VP++E + + A
Sbjct: 482 IASDGEKYSPEGMEEAIVDKSPYIDQIIVHNNQSPFTGAIVVPNREALRRELEARRTPEA 541
Query: 420 DASELSKEKTISLLYGELRKWTSKCSFQ--------IGPIHVVDEPFT 459
+ + ++ E +L E+ ++ + ++ + +VDE FT
Sbjct: 542 ERANVAAE----ILGAEIDRYRAGGTYAGEFPERWLPAGLAIVDEAFT 585
>gi|378696081|ref|YP_005178039.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
10810]
gi|301168604|emb|CBW28193.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
10810]
Length = 599
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 167/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKDIPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 320 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHNFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 532 DILKMFEQ 539
>gi|383110916|ref|ZP_09931734.1| hypothetical protein BSGG_2021 [Bacteroides sp. D2]
gi|313694486|gb|EFS31321.1| hypothetical protein BSGG_2021 [Bacteroides sp. D2]
Length = 604
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 185/398 (46%), Gaps = 57/398 (14%)
Query: 73 DKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP +E
Sbjct: 221 DKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + IR+ RI+ +D+L
Sbjct: 281 VYAGVQEKINETTGLKKALMLDAIRVG-------RIHN-----------------LDYLR 316
Query: 190 ARIICAILWPL-HLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQV 246
++ L + EK +Y ++ IGI + G ++P I+ F ++G+ + V
Sbjct: 317 LGKTPPVMNQLKYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVV 376
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 377 GYGLTESTATVSCTLPVGYDIGSVGVVLPGLEVKI--GEDNEIL---------LRGKTIT 425
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GY+K AT A++ DGW +TGD G+ G L L R KD S G+
Sbjct: 426 KGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGK 474
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
V P LE + I QI +I ++ A+IVP V AK I + D +EL +
Sbjct: 475 YVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELLQ 534
Query: 427 EKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F QI ++ EPF++
Sbjct: 535 HPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|319896424|ref|YP_004134617.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae F3031]
gi|317431926|emb|CBY80272.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
F3031]
Length = 599
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 167/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 320 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 532 DILKMFEQ 539
>gi|398383106|ref|ZP_10541181.1| AMP-forming long-chain acyl-CoA synthetase [Sphingobium sp. AP49]
gi|397725366|gb|EJK85818.1| AMP-forming long-chain acyl-CoA synthetase [Sphingobium sp. AP49]
Length = 592
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 184/403 (45%), Gaps = 79/403 (19%)
Query: 75 FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP H YE + G F+ G ++ Y + L +++ +P M+ VP ++E L +
Sbjct: 224 FLSFLPLSHAYEHSGGQFLPMLLGGQIYYAEGLEKLASNIEETRPTIMVVVPRLFEVLRT 283
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I K I + +RI+ + Q+ S V L
Sbjct: 284 RIIKSIEKQGKFPTYLLHQALRIA---------------AKEQQGKSSFVDL-------- 320
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
P+ L + + KI++ G KA VSGG L + LF++A+G+ + GYG T
Sbjct: 321 ------PIKALLARTLIPKIRARFGGRMKALVSGGAPLNPDVGLFFDAMGLTLLQGYGQT 374
Query: 252 ESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
E+ PVI+ RP + + +VG P++ E+KI AE E+L VRG VM GY+
Sbjct: 375 EAGPVISCNRPAAGIAMDTVGPPLDGVEVKI--AEDGEIL---------VRGELVMHGYW 423
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
+NP+ T++AL +DGWL+TGDIG I RGR R + R KD IV G+NV P
Sbjct: 424 RNPAETEKAL-KDGWLHTGDIGEI---DDRGRIR-------ITDRKKDLIVNDKGDNVAP 472
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRP--GAIIVPDKEEVL----MAAKRLSIVHADASEL 424
++E I Q +V G RRP ++VPD E L M + + + D +
Sbjct: 473 QKVEGMLTLQPEIGQAMVYG--DRRPYLVGLVVPDAEWTLEWAAMNGRSIQGIMQDTA-- 528
Query: 425 SKEKTISLLYGELRKWTSKCSFQIGPIHVV------DEPFTVN 461
+ LR + + + I V DEPFT+
Sbjct: 529 --------YHAALRAAVDRVNDDLSVIERVRRFILADEPFTIE 563
>gi|427409489|ref|ZP_18899691.1| hypothetical protein HMPREF9718_02165 [Sphingobium yanoikuyae ATCC
51230]
gi|425711622|gb|EKU74637.1| hypothetical protein HMPREF9718_02165 [Sphingobium yanoikuyae ATCC
51230]
Length = 592
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 166/341 (48%), Gaps = 60/341 (17%)
Query: 72 GDK-FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 128
GD+ FLS LP H YE + G F+ G ++ Y + L +++ +P M+ VP ++E
Sbjct: 220 GDEVFLSFLPLSHAYEHSGGQFLPMLLGGQIYYAEGLEKLASNIEEARPTIMVVVPRLFE 279
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
L + I K I + +RI+ + Q+ S +V L
Sbjct: 280 VLRTRIIKSIEKQGKFPTYLLNQALRIA---------------AKEQQGKSSIVDL---- 320
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
P+ L + + KI++ G KA VSGG L + LF+EA+G+ + G
Sbjct: 321 ----------PMKALLARTLIPKIRARFGGRMKALVSGGAPLNPDVGLFFEAMGLMLLQG 370
Query: 248 YGLTESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
YG TE+ PVI+ RP + + +VG P++ E+KI AE E+L VRG VM
Sbjct: 371 YGQTEAGPVISCNRPAAGIAMDTVGPPLDGVEVKI--AEDGEIL---------VRGELVM 419
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY++NP+ T++ L +DGWL+TGDIG I RGR R + R KD IV G+
Sbjct: 420 HGYWRNPAETEKVL-KDGWLHTGDIGEI---DGRGRIR-------ITDRKKDLIVNDKGD 468
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPG--AIIVPDKE 405
NV P ++E I Q +V G RRP ++VPD E
Sbjct: 469 NVSPQKVEGMLTLQPEIGQAMVYG--DRRPHLVGLLVPDSE 507
>gi|262166521|ref|ZP_06034258.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM223]
gi|262026237|gb|EEY44905.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM223]
Length = 601
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V +++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS+L
Sbjct: 280 SAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQNHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ I+ S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATISCWDDYSFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KLEKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|238752418|ref|ZP_04613895.1| long-chain-fatty-acid--CoA ligase [Yersinia rohdei ATCC 43380]
gi|238709351|gb|EEQ01592.1| long-chain-fatty-acid--CoA ligase [Yersinia rohdei ATCC 43380]
Length = 599
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 173/373 (46%), Gaps = 47/373 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 131
D LS LP HV+ERA +++ G + +Y + N ++ +Q QP M +VP YE ++
Sbjct: 222 DISLSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVRPAMQAVQPTVMCAVPRFYEKVF 281
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I ++ + R+ + R + FK + +G L+ +Q
Sbjct: 282 SAINDKVALAKWHRQKLFRWAV--GCGERKFKSVQDGQALSPLSEQ-------------- 325
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L+ LA +LV K++ +G + + G L +I LF++AIG+ ++ GYG+
Sbjct: 326 --------LYKLANRLVLSKLRGILGGKVRFLPAAGARLDDNIILFFQAIGINIKYGYGM 377
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE+ ++ GS+G P+ E+++ G++ ++VRG VM+GYF
Sbjct: 378 TETCATVSCWEEKDFRFGSIGKPLPGIEVRL-----------GAENEIQVRGPIVMRGYF 426
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P T ++ EDGWL TGD G + G L + R KD + S G+ + P
Sbjct: 427 NKPQETAESFTEDGWLKTGDAGALDSQ----------GNLFITERLKDLMKTSGGKYIAP 476
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + I Q+ +I ++ A+IVP E + A+ +++ + D EL + I
Sbjct: 477 QMIEGTLGQDRFIEQVAIIADTRKFVSALIVPCFESLEEYARSINLKYHDRFELLRHSHI 536
Query: 431 SLLYGELRKWTSK 443
L+ + K K
Sbjct: 537 VSLFEQRLKDMQK 549
>gi|384102846|ref|ZP_10003829.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383839515|gb|EID78866.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 599
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 163/340 (47%), Gaps = 49/340 (14%)
Query: 69 AENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVY 127
A G++ L+ LP HV RA +F G I+ ++ + + +R++P+ ++ VP V+
Sbjct: 218 ARPGNRVLTFLPLAHVLARAVSLAMFEAGAIQAHWSDFGTVTGEFERFRPNTILGVPRVF 277
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E + G ++ ++ ++ + + AY+ ++ PS + L
Sbjct: 278 EKVRDGAARKASSAGGLQKRIFDFAEATAVAYSE----------AQDAGGPSLRLRL--- 324
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQV 246
LA+KLVY K+++A+G +SGGG+L + F+ +GV V
Sbjct: 325 ------------ERALADKLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGMGVPVYE 372
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+ P +G+VG P++ ++I + G +++RG V
Sbjct: 373 GYGLTESTAAHCVNVPGVQKIGTVGQPLSGNSVRIAE-----------DGEIELRGGVVF 421
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY++N AT++ LD DGW TGD+G + G L + GR KD ++ + G+
Sbjct: 422 GGYWRNEHATREVLD-DGWFRTGDLGDLDDE----------GYLTITGRKKDLLITAGGK 470
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 406
NV P LE+ +L+ Q VV+G + GA++ D +E
Sbjct: 471 NVSPGPLEDRLRSHTLVSQAVVVGDGRPFVGALLTVDPQE 510
>gi|260582084|ref|ZP_05849879.1| long-chain acyl-CoA synthetase [Haemophilus influenzae NT127]
gi|260094974|gb|EEW78867.1| long-chain acyl-CoA synthetase [Haemophilus influenzae NT127]
Length = 599
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 167/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 320 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 532 DILKMFEQ 539
>gi|432336080|ref|ZP_19587613.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
gi|430776994|gb|ELB92384.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
Length = 599
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 163/340 (47%), Gaps = 49/340 (14%)
Query: 69 AENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVY 127
A G++ L+ LP HV RA +F G I+ ++ + + +R++P+ ++ VP V+
Sbjct: 218 ARPGNRVLTFLPLAHVLARAVSLAMFEAGAIQAHWSDFGTVTGEFERFRPNAILGVPRVF 277
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E + G ++ ++ ++ + + AY+ ++ PS + L
Sbjct: 278 EKVRDGAARKASSAGGLQKRIFDFAEATAVAYSE----------AQDAGGPSLRLRL--- 324
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQV 246
LA+KLVY K+++A+G +SGGG+L + F+ +GV V
Sbjct: 325 ------------ERALADKLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGMGVPVYE 372
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+ P +G+VG P++ ++I + G +++RG V
Sbjct: 373 GYGLTESTAAHCVNVPGVQKIGTVGQPLSGNSVRIAE-----------DGEIELRGGVVF 421
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY++N AT++ LD DGW TGD+G + G L + GR KD ++ + G+
Sbjct: 422 GGYWRNEHATREVLD-DGWFRTGDLGDLDDE----------GYLTITGRKKDLLITAGGK 470
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 406
NV P LE+ +L+ Q VV+G + GA++ D +E
Sbjct: 471 NVSPGPLEDRLRSHTLVSQAVVVGDGRPFVGALLTVDPQE 510
>gi|419963959|ref|ZP_14479919.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
gi|414570495|gb|EKT81228.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
Length = 599
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 163/340 (47%), Gaps = 49/340 (14%)
Query: 69 AENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVY 127
A G++ L+ LP HV RA +F G I+ ++ + + +R++P+ ++ VP V+
Sbjct: 218 ARPGNRVLTFLPLAHVLARAVSLAMFEAGAIQAHWSDFGTVTGEFERFRPNTILGVPRVF 277
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E + G ++ ++ ++ + + AY+ ++ PS + L
Sbjct: 278 EKVRDGAARKASSAGGLQKRIFDFAEATAVAYSE----------AQDAGGPSLRLRL--- 324
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQV 246
LA+KLVY K+++A+G +SGGG+L + F+ +GV V
Sbjct: 325 ------------ERALADKLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGMGVPVYE 372
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+ P +G+VG P++ ++I + G +++RG V
Sbjct: 373 GYGLTESTAAHCVNVPGVQKIGTVGQPLSGNSVRIAE-----------DGEIELRGGVVF 421
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY++N AT++ LD DGW TGD+G + G L + GR KD ++ + G+
Sbjct: 422 GGYWRNEHATREVLD-DGWFRTGDLGDLDDE----------GYLTITGRKKDLLITAGGK 470
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 406
NV P LE+ +L+ Q VV+G + GA++ D +E
Sbjct: 471 NVSPGPLEDRLRSHTLVSQAVVVGDGRPFVGALLTVDPQE 510
>gi|262277937|ref|ZP_06055730.1| AMP-dependent synthetase and ligase [alpha proteobacterium HIMB114]
gi|262225040|gb|EEY75499.1| AMP-dependent synthetase and ligase [alpha proteobacterium HIMB114]
Length = 563
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 169/347 (48%), Gaps = 55/347 (15%)
Query: 61 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHY 119
++L D + +N +F++ LP H YE + + G ++ Y+ V L D+++ +PH
Sbjct: 201 KNLVDELQVKNP-RFITWLPLSHSYEHTVQFVQIALGAKIFYSPVIEKLLDNIKIAKPHV 259
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIR-ISFAYTAFKRIYEGFCLTRNQKQP 178
M +VP Y LY+ + + SS+ ++ R ++ + FK K+
Sbjct: 260 MTAVPRFYNNLYNKMMSGVLKSSSFKK---RLFLKTVELGSKDFK-----------NKKL 305
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
S + I++L L++L K V I++ G KA VSGGG L ++ LF
Sbjct: 306 SIIEKFINYL-----------LNILVRKKV---IKNFGGNLKAFVSGGGPLDQNVGLFLN 351
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA-ETNEVLPAGSKGI 297
++G+K GYGLTE+SPV++ CN P+N +I+ V A +N + G
Sbjct: 352 SLGLKTLQGYGLTETSPVVS-----CN-------PVNKIKIETVGAIFSNNKVKIAEDGE 399
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
+ V+G +M GY+KN AT Q L ++GWL+TGD+G I G L + R K
Sbjct: 400 ILVKGENIMLGYWKNEDATNQVL-KNGWLHTGDVGEIDDE----------GYLKITDRKK 448
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 404
D IV G+N+ P ++E I Q V G +Q+ ++V +K
Sbjct: 449 DIIVTLGGDNISPSKIENLLCLHDEIEQAYVHGDNQKYLSCLLVLNK 495
>gi|262405353|ref|ZP_06081903.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|293370545|ref|ZP_06617097.1| AMP-binding enzyme [Bacteroides ovatus SD CMC 3f]
gi|294644597|ref|ZP_06722350.1| AMP-binding enzyme [Bacteroides ovatus SD CC 2a]
gi|294810339|ref|ZP_06769000.1| AMP-binding enzyme [Bacteroides xylanisolvens SD CC 1b]
gi|336404562|ref|ZP_08585255.1| hypothetical protein HMPREF0127_02568 [Bacteroides sp. 1_1_30]
gi|345507938|ref|ZP_08787579.1| hypothetical protein BSAG_00060 [Bacteroides sp. D1]
gi|229442559|gb|EEO48350.1| hypothetical protein BSAG_00060 [Bacteroides sp. D1]
gi|262356228|gb|EEZ05318.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292634279|gb|EFF52816.1| AMP-binding enzyme [Bacteroides ovatus SD CMC 3f]
gi|292640034|gb|EFF58299.1| AMP-binding enzyme [Bacteroides ovatus SD CC 2a]
gi|294442447|gb|EFG11253.1| AMP-binding enzyme [Bacteroides xylanisolvens SD CC 1b]
gi|335941466|gb|EGN03319.1| hypothetical protein HMPREF0127_02568 [Bacteroides sp. 1_1_30]
Length = 604
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 184/398 (46%), Gaps = 57/398 (14%)
Query: 73 DKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP +E
Sbjct: 221 DKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + IR+ RI+ +D+L
Sbjct: 281 VYAGVQEKINETTGLKKALMLDAIRVG-------RIHN-----------------LDYLR 316
Query: 190 ARIICAILWPL-HLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQV 246
++ L + EK +Y ++ IGI + G ++P I+ F ++G+ + V
Sbjct: 317 LGKTPPVMNQLKYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVV 376
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 377 GYGLTESTATVSCTLPVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTIT 425
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GY+K AT A++ DGW +TGD G+ G L L R KD S G+
Sbjct: 426 KGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGK 474
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
V P LE + I QI +I ++ A+IVP V A+ I + D EL K
Sbjct: 475 YVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAEEKGIKYKDMEELLK 534
Query: 427 EKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F QI ++ EPF++
Sbjct: 535 HPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|323495983|ref|ZP_08101047.1| long-chain acyl-CoA synthetase [Vibrio sinaloensis DSM 21326]
gi|323318945|gb|EGA71892.1| long-chain acyl-CoA synthetase [Vibrio sinaloensis DSM 21326]
Length = 602
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 178/388 (45%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALADVRPTVMSAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ + + A + EG + PS+
Sbjct: 280 SAIHEKVAKAPFIRKVLFTWAVNMGAKMAACHQ--EG-------RNPSF----------- 319
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 320 ----ALKKAHGLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDQCFDPDSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETAKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMVEGTIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
E+ ++ L EL K+ F++ P
Sbjct: 535 VEMLEQRVNDLQKELAKFEQVKKFKLLP 562
>gi|145630709|ref|ZP_01786488.1| long chain fatty acid CoA ligase [Haemophilus influenzae R3021]
gi|144983835|gb|EDJ91285.1| long chain fatty acid CoA ligase [Haemophilus influenzae R3021]
Length = 599
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 164/362 (45%), Gaps = 47/362 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 320 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TI 430
I
Sbjct: 532 DI 533
>gi|423204014|ref|ZP_17190570.1| hypothetical protein HMPREF1168_00205 [Aeromonas veronii AMC34]
gi|404628008|gb|EKB24796.1| hypothetical protein HMPREF1168_00205 [Aeromonas veronii AMC34]
Length = 596
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 183/388 (47%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L MLP HV+ERA Y++ G E +Y + + D + QP M +VP +YE Y
Sbjct: 218 DVSLCMLPLSHVFERAWSYYVLYCGAENVYIRDPQKVMDVIGEVQPTVMCAVPRLYEKAY 277
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ IQ ++ + A RR + F + ++ + TR + + +
Sbjct: 278 AMIQAKVAQAPALRRAL--------FGWAT--KVGKQMIATRQAGKTA----------SP 317
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYGL 250
++ + LW LAE+LV++K+++ G + G L ++LF++A+G+ ++ GYG+
Sbjct: 318 LLYSQLW----LAERLVFRKLRARFGGRTRFLPVAGARLADDVNLFFQAMGLNLKYGYGM 373
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ + + LGS+G +N E+K+ E NE+L VR VM+GY+
Sbjct: 374 TETTATVCCYEDSQFKLGSIGTALNGIEVKL--GENNELL---------VRSPTVMRGYY 422
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P AT + + EDG+L TGD G + C G + R K+ + S G+ V P
Sbjct: 423 NKPDATAEVMTEDGFLRTGDAGELD----------CQGNIYFTERLKELMKTSNGKYVAP 472
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E + I QI ++ + A+IVP E + A+ +++ + +EL +
Sbjct: 473 QLVEGTIGKDRFIEQIAIVADARHFVSALIVPCFESLEEYARSINLQYQCKTELLRHSRV 532
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
E I+ L EL K+ F + P
Sbjct: 533 MEFFEARIADLQKELAKFEQVKKFTLLP 560
>gi|410895203|ref|XP_003961089.1| PREDICTED: long-chain-fatty-acid--CoA ligase 5-like isoform 1
[Takifugu rubripes]
Length = 683
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 182/405 (44%), Gaps = 57/405 (14%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGYFIFSRG--IELMYTAVRNLKDDLQRYQPHYMISV 123
IVP+ D +S LP H++ER I+ G + +R L DD++ QP V
Sbjct: 294 IVPSTE-DVTISFLPLAHMFERVVQTVIYGAGGRVGFFQGDIRLLPDDMKTLQPTIFPVV 352
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P + +Y +Q S A + FK+ F + R + +
Sbjct: 353 PRLLNRVYDKVQ--------------------SGAKSPFKKWLLNFAVDRKYAEVKEGIV 392
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI-G 241
+ LW +KL++ K+Q+++G + V+G + ++ F A+ G
Sbjct: 393 RNNSLW---------------DKLIFNKVQASLGGRVRVMVTGAAPISPNVLTFLRAVLG 437
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 301
++ GYG TE + P G VG P+ +K+VD E + +G V ++
Sbjct: 438 CQIFEGYGQTECTAGCTFTMPGDATAGHVGAPLPCNIVKLVDVEEMNYFASNGEGEVCIK 497
Query: 302 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 361
G V +GY K+P T +ALD+DGWL+TGDIG P GVL + R K+
Sbjct: 498 GKNVFKGYLKDPEKTAEALDDDGWLHTGDIGKWLPS----------GVLKIIDRKKNIFK 547
Query: 362 LSTGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHAD 420
L+ GE + P ++E +RS L+ Q+ V G Q A+++PD E++ AK+L V
Sbjct: 548 LAQGEYIAPEKIENVYVRSGLVAQVFVHGDSLQSCLVAVVIPDPEDLPSFAKKLG-VQGS 606
Query: 421 ASELSK----EKTISLLYGELRKWTSKCSF-QIGPIHVVDEPFTV 460
EL K +K I +L K SF Q+ I++ E FT+
Sbjct: 607 LKELCKNTEIKKAILSDMTKLGKEAGLKSFEQVKDIYLHPEQFTI 651
>gi|229845424|ref|ZP_04465554.1| long chain fatty acid CoA ligase [Haemophilus influenzae 6P18H1]
gi|229811620|gb|EEP47319.1| long chain fatty acid CoA ligase [Haemophilus influenzae 6P18H1]
Length = 599
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 167/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ Y A + F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMF---------YWAISVGQKHFDLRANNKTVPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 320 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 532 DILKMFEQ 539
>gi|72161435|ref|YP_289092.1| long-chain fatty-acid-CoA ligase [Thermobifida fusca YX]
gi|71915167|gb|AAZ55069.1| long-chain fatty-acid-CoA ligase [Thermobifida fusca YX]
Length = 598
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 146/302 (48%), Gaps = 53/302 (17%)
Query: 107 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR--RVVARALIRISFAYTAFKR 164
+L D L ++P ++++VP V+E +Y+ +++ S R A I S A K
Sbjct: 260 DLLDALASFRPMFLLAVPRVFEKVYNKAEQKAIASGKGDIFRKAAETAIAYSKALDTGK- 318
Query: 165 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGV 223
+ G L R ++ L LVY+KI +A+G +K V
Sbjct: 319 VSLGLRLKR----------------------AVFSL------LVYRKILAAVGGQAKYAV 350
Query: 224 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 283
SGG +L + F+ IG+ V GYGLTE+S A P N +G+VG PI T I+I D
Sbjct: 351 SGGSALGERLGHFFRGIGLTVLEGYGLTETSAPTTANAPDTNKIGTVGRPIPGTSIRIAD 410
Query: 284 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 343
G + V+G VM+GY+ NP ATK+A EDGW +GDIG +
Sbjct: 411 -----------DGEILVKGDNVMRGYWNNPKATKEAFTEDGWYRSGDIGELDEE------ 453
Query: 344 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
G L + GR K+ IV + G+NV P +E+ +++ Q +V+G +++ A+I D
Sbjct: 454 ----GFLRITGRKKEIIVTAGGKNVAPAVIEDRIRSHAIVSQCMVVGDNRKFVAALITID 509
Query: 404 KE 405
E
Sbjct: 510 PE 511
>gi|448366535|ref|ZP_21554658.1| AMP-dependent synthetase and ligase [Natrialba aegyptia DSM 13077]
gi|445653990|gb|ELZ06846.1| AMP-dependent synthetase and ligase [Natrialba aegyptia DSM 13077]
Length = 680
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 185/395 (46%), Gaps = 59/395 (14%)
Query: 59 QIRSLYDIVPAENGD--------KFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-L 108
QIR + P + D + +S LP HV+ER G+F+ F+ G + Y + L
Sbjct: 243 QIRKRFAPRPDRDADVPVIDAESQAMSYLPLAHVFERTAGHFLLFASGACVAYAENPDTL 302
Query: 109 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 168
++D QP+ SVP VYE +Y I++Q S +R+ A + A++R
Sbjct: 303 QEDFSIVQPNTATSVPRVYEKIYDTIREQASESPIKKRLFEWA----TDVGVAYER---- 354
Query: 169 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 227
A +L LA+KLV+ ++ A+G ++ +SGGG
Sbjct: 355 ---------------------ADSPGPVLAAKQTLADKLVFSTVREALGGEIESLISGGG 393
Query: 228 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA--E 285
SL + Y A+G+ + GYGLTE+SPVIA P +G++G ++ +I I ++ +
Sbjct: 394 SLSPELCRLYHAMGLPIFEGYGLTETSPVIAVNPPDDPRIGTIGPTLSDVDISIDESVVD 453
Query: 286 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL------DEDGWLNTGDIGWIAPHHS 339
+ G+ G + VRG V +GY+ P+AT +A D G + D G +
Sbjct: 454 QDAFDDPGAVGELLVRGPNVTEGYWNMPAATDRAFTEAAAEDAAGVTSRPDGGTVLDTTD 513
Query: 340 RGRSR---RCGGVLVLEG--------RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 388
+ R G V+ L G R K +VLSTG+NV P LE+A S ++ Q +V
Sbjct: 514 DSTAEQWFRTGDVVHLRGDNYIEFRDRVKQLLVLSTGKNVAPGPLEDAFAASEVVEQCMV 573
Query: 389 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
+G ++ GA++VP+ E + A I D ++
Sbjct: 574 VGDGEKFIGALLVPNVEHIRTWADEQGIDLPDDTD 608
>gi|409098435|ref|ZP_11218459.1| AMP-dependent synthetase and ligase [Pedobacter agri PB92]
Length = 591
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 173/374 (46%), Gaps = 53/374 (14%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGY-FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVP 124
+V + +K LS LP H++ER Y ++F++ ++ + D+Q +P+ +VP
Sbjct: 205 VVMPDGVNKSLSFLPLSHIFERMIIYLYLFNKTSIYYAESMDTIVADIQHVKPNAFSTVP 264
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+ E +Y I ++ + + +R + + ++ YT + F L
Sbjct: 265 RLLEKVYDKIMEKGKSLTGIKRGIFFWSVALAEKYTTDAGAWYNFKLG------------ 312
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVK 243
+A KLV+KK Q A+G VSGG +L + + A G+
Sbjct: 313 ------------------IARKLVFKKWQEALGGEIVVIVSGGAALNPRLARIFWAAGMP 354
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
V GYGLTE+SPVI + G+VG I E+KI A+ EVL RG
Sbjct: 355 VFEGYGLTETSPVITVNHFGGTMFGTVGEVIKGVEVKI--AQDGEVL---------TRGH 403
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
QVM+GY+ P TK+A+D +GW +TGDIG + G L + R K+ +
Sbjct: 404 QVMKGYYNRPDLTKEAIDAEGWFHTGDIGELID----------GRFLKITDRKKEMFKTA 453
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 423
G+ V P LE S I QI+V+G++++ P A+IVP+ E + A + I E
Sbjct: 454 GGKYVAPQILENKYKESIFIEQIMVLGENRKFPSALIVPNFETLKTWAAKKGINFTTNEE 513
Query: 424 LSKEKTISLLYGEL 437
+ K + + + E+
Sbjct: 514 IIKNEQVLAKFNEI 527
>gi|298481594|ref|ZP_06999785.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D22]
gi|423214977|ref|ZP_17201505.1| hypothetical protein HMPREF1074_03037 [Bacteroides xylanisolvens
CL03T12C04]
gi|298272135|gb|EFI13705.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D22]
gi|392692240|gb|EIY85478.1| hypothetical protein HMPREF1074_03037 [Bacteroides xylanisolvens
CL03T12C04]
Length = 604
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 184/398 (46%), Gaps = 57/398 (14%)
Query: 73 DKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP +E
Sbjct: 221 DKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + IR+ RI+ +D+L
Sbjct: 281 VYAGVQEKINETTGLKKALMLDAIRVG-------RIHN-----------------LDYLR 316
Query: 190 ARIICAILWPL-HLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQV 246
++ L + EK +Y ++ IGI + G ++P I+ F ++G+ + V
Sbjct: 317 LGKTPPVMNQLKYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVV 376
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 377 GYGLTESTATVSCTLPVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTIT 425
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GY+K AT A++ DGW +TGD G+ G L L R KD S G+
Sbjct: 426 KGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGK 474
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
V P LE + I QI +I ++ A+IVP V A+ I + D EL K
Sbjct: 475 YVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAEEKGIKYKDMEELLK 534
Query: 427 EKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F QI ++ EPF++
Sbjct: 535 HPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|422023500|ref|ZP_16370005.1| long-chain-fatty-acid--CoA ligase [Providencia sneebia DSM 19967]
gi|414094268|gb|EKT55938.1| long-chain-fatty-acid--CoA ligase [Providencia sneebia DSM 19967]
Length = 605
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 172/373 (46%), Gaps = 47/373 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D LS LP HV+ERA +++ G +Y T +++ + +P M +VP YE +Y
Sbjct: 228 DVSLSFLPLSHVFERAWSFYVMHVGARNVYLTETNAVREAMVDVKPTVMCAVPRFYEKVY 287
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S IQ ++ + RR++ F + + LT+N K
Sbjct: 288 SVIQSKVANAPLHRRLM--------FNWAIAQGQKRTRALTKNSK--------------- 324
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
A+ L+ +A+KLV K++ +G + + G L +I F+ A G+ ++ GYG+
Sbjct: 325 -TNALNGLLYKIADKLVLAKLRQVLGGRIRFMPAAGARLDDNIIAFFLAAGIDIKYGYGM 383
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE+ ++ LGS+G P++ E++I G ++V+G VM+GY+
Sbjct: 384 TETCATVSCWEENHYPLGSIGTPLSAVEVRI-----------GQDDEIQVKGPVVMKGYY 432
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P T+ A DGWL TGD G I H G L + R KD + S G+ + P
Sbjct: 433 NRPEETESAFTHDGWLKTGDAGKIDVH----------GNLYITDRLKDLMKTSNGKYIAP 482
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + I I VI ++ A+IVP + + A+ +++++ D EL K+ +I
Sbjct: 483 QMIEGILGQDRFIEHIAVIADARKFVSALIVPCYDSLEEYARSINLIYRDRLELLKDSSI 542
Query: 431 SLLYGELRKWTSK 443
L+ + K K
Sbjct: 543 VALFDKRLKELQK 555
>gi|417850883|ref|ZP_12496700.1| FadD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338220259|gb|EGP05803.1| FadD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
Length = 606
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 47/366 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 131
D LS LP H++ERA ++ RG Y N +++ L +P M +VP YE +Y
Sbjct: 223 DSSLSFLPLSHIFERAWVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIY 282
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ + ++ + RR++ ++A ++ ++ +QK+P
Sbjct: 283 TAVWDKVQKAPLFRRMI------FNWAIVVGQKCFQFI----SQKKP------------- 319
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
I +L + LA+KLV K++ +G + GG L +I LF+ +IG+ V++GYG+
Sbjct: 320 -IPFVLRQQYALADKLVLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGM 378
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ S+G + E+KI E NE+L VRG VM+GY+
Sbjct: 379 TETTATVSCWEEGHFEPNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYY 427
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + EDG+L TGD G P G L + R K+ + S G+ + P
Sbjct: 428 KKPQETADSFTEDGFLKTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAP 477
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + I QI VI ++ A+IVP + AK+L+I + D EL K I
Sbjct: 478 QYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDI 537
Query: 431 SLLYGE 436
++ +
Sbjct: 538 LQMFEQ 543
>gi|410895205|ref|XP_003961090.1| PREDICTED: long-chain-fatty-acid--CoA ligase 5-like isoform 2
[Takifugu rubripes]
Length = 689
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 182/405 (44%), Gaps = 57/405 (14%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGYFIFSRG--IELMYTAVRNLKDDLQRYQPHYMISV 123
IVP+ D +S LP H++ER I+ G + +R L DD++ QP V
Sbjct: 300 IVPSTE-DVTISFLPLAHMFERVVQTVIYGAGGRVGFFQGDIRLLPDDMKTLQPTIFPVV 358
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P + +Y +Q S A + FK+ F + R + +
Sbjct: 359 PRLLNRVYDKVQ--------------------SGAKSPFKKWLLNFAVDRKYAEVKEGIV 398
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI-G 241
+ LW +KL++ K+Q+++G + V+G + ++ F A+ G
Sbjct: 399 RNNSLW---------------DKLIFNKVQASLGGRVRVMVTGAAPISPNVLTFLRAVLG 443
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 301
++ GYG TE + P G VG P+ +K+VD E + +G V ++
Sbjct: 444 CQIFEGYGQTECTAGCTFTMPGDATAGHVGAPLPCNIVKLVDVEEMNYFASNGEGEVCIK 503
Query: 302 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 361
G V +GY K+P T +ALD+DGWL+TGDIG P GVL + R K+
Sbjct: 504 GKNVFKGYLKDPEKTAEALDDDGWLHTGDIGKWLPS----------GVLKIIDRKKNIFK 553
Query: 362 LSTGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHAD 420
L+ GE + P ++E +RS L+ Q+ V G Q A+++PD E++ AK+L V
Sbjct: 554 LAQGEYIAPEKIENVYVRSGLVAQVFVHGDSLQSCLVAVVIPDPEDLPSFAKKLG-VQGS 612
Query: 421 ASELSK----EKTISLLYGELRKWTSKCSF-QIGPIHVVDEPFTV 460
EL K +K I +L K SF Q+ I++ E FT+
Sbjct: 613 LKELCKNTEIKKAILSDMTKLGKEAGLKSFEQVKDIYLHPEQFTI 657
>gi|229846920|ref|ZP_04467026.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
7P49H1]
gi|229810004|gb|EEP45724.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
7P49H1]
Length = 599
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDISLSFLPFSHIFERAWAAYILHRGTILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRTNNK------------- 314
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
+I +L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 315 --VIPFLLKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+++I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQINIKYHDRLELLKNS 531
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 532 DILKMFEQ 539
>gi|444432653|ref|ZP_21227805.1| long-chain fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
gi|443886574|dbj|GAC69526.1| long-chain fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
Length = 601
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 154/336 (45%), Gaps = 50/336 (14%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G + L LP HV RA G+E+ +T+ + NL + ++P ++SVP V+E +
Sbjct: 225 GRRMLMFLPMAHVLARAITLVAIEAGVEVGFTSDIPNLVPEFAVFKPSLILSVPRVFEKV 284
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
++ +++ R A A + ++ G
Sbjct: 285 FASARQKAHDDGKGRIFDAAATTAVEYSEALGTDSGPGI--------------------- 323
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
+L H L + LVY K+++A+G + +SGG L + F+ IG+ V GYG
Sbjct: 324 -----VLRAKHRLFDALVYGKLRAALGGDCELAISGGAPLGARLGHFFRGIGIPVYEGYG 378
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE++ A P + +G+VG P+ +++ G G V + G V GY
Sbjct: 379 LTETTAAFAVNTPGEHKVGTVGKPLAGNSVRL-----------GEDGEVLLSGGVVFDGY 427
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
++NP AT AL EDGW +TGD+G I G + + GR K+ IV + G+NV
Sbjct: 428 WQNPEATASAL-EDGWFHTGDLGRIDDE----------GFITITGRKKELIVTAGGKNVS 476
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+ + L+ Q +V+G +Q GA++ D E
Sbjct: 477 PAGLEDVIRANPLVSQALVVGDNQPFIGALVTIDPE 512
>gi|159039049|ref|YP_001538302.1| AMP-dependent synthetase and ligase [Salinispora arenicola CNS-205]
gi|157917884|gb|ABV99311.1| AMP-dependent synthetase and ligase [Salinispora arenicola CNS-205]
Length = 599
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 158/337 (46%), Gaps = 51/337 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G L LP HV+ R + + + A ++L LQ +P +++SVP V+E +
Sbjct: 222 GASTLLFLPLAHVFARLIQVGVVQARATMAHCADTKDLIARLQAVRPTFVLSVPRVFEKV 281
Query: 131 YSGIQKQIFTSSAARRVVARA-LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
Y+ KQ + R+ ARA + I+++ R G L R Q
Sbjct: 282 YNS-AKQKAEADGKGRIFARAEAVAIAYSEALETRTGPGLAL-RVQ-------------- 325
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
H L ++LVY+K+++A+ G + +SGG L + F+ +GV + GY
Sbjct: 326 -----------HALFDRLVYRKLRAALGGRCRDAISGGAPLGARLGHFFRGVGVTIYEGY 374
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTE+SP A RP +GSVG P+ I+I D +E+L + G V G
Sbjct: 375 GLTETSPAACANRPGAIRIGSVGRPLPGVNIRIDD--DDEIL---------IAGELVFTG 423
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y++N +A+ + L DGW TGD+G + G L + GR K+ IV + G+NV
Sbjct: 424 YWRNEAASAEVLTPDGWFRTGDLGQL----------DSDGYLNITGRKKEIIVTAGGKNV 473
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+ L+ Q VV+G Q A++ D+E
Sbjct: 474 APAVLEDQVRAHPLVSQCVVVGDRQPFVAALVTVDEE 510
>gi|261253922|ref|ZP_05946495.1| long-chain-fatty-acid--CoA ligase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954558|ref|ZP_12597591.1| putative long-chain-fatty-acid-CoA ligase [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|260937313|gb|EEX93302.1| long-chain-fatty-acid--CoA ligase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342815104|gb|EGU50031.1| putative long-chain-fatty-acid-CoA ligase [Vibrio orientalis CIP
102891 = ATCC 33934]
Length = 602
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 177/389 (45%), Gaps = 57/389 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C +K PS +
Sbjct: 280 SAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVCHQEGRK-PSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYG 249
L + LA+KLV K+++ +G K GG L I F+ AIG+ V++GYG
Sbjct: 321 -----LKKSYALADKLVLSKLRALLG-GKINFMPCGGAKLDETIGRFFHAIGINVKLGYG 374
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
+TE++ ++ C S+G + ++KI E NE+L VRG VM+GY
Sbjct: 375 MTETTATVSCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGY 423
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+K P T + DE G+L TGD G I + G V + + R K+ + S G+ +
Sbjct: 424 YKMPEETAKTFDEHGFLKTGDAGHIDEN---------GNVFITD-RIKELMKTSNGKYIA 473
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--- 426
P +E + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 474 PQMVEGTIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELVKHHQ 533
Query: 427 -----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 534 IVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|164656062|ref|XP_001729159.1| hypothetical protein MGL_3626 [Malassezia globosa CBS 7966]
gi|159103049|gb|EDP41945.1| hypothetical protein MGL_3626 [Malassezia globosa CBS 7966]
Length = 670
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 170/382 (44%), Gaps = 72/382 (18%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMY--------TAVRNLKDDLQRYQPHYMISV 123
GD L+ LP H+ E F+ GI + Y +VRN + DLQ Y+P M+ V
Sbjct: 285 GDSLLAYLPLAHILEFVVECFLMYFGIGIGYGRVKTLTSASVRNCEGDLQAYRPTLMVGV 344
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P V+E + GI ++ S A ++
Sbjct: 345 PAVWELIRKGILSKVQQSGATKQ------------------------------------K 368
Query: 184 LIDW-LWAR---IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 238
L +W +WA+ + C L LA+ +V+K +++ G + +SGG + F
Sbjct: 369 LFNWSMWAKDKEVPC-----LKQLADSVVFKSVRAQTGGRLRYALSGGAPISRETHQFLN 423
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS--KG 296
V + GYG+TESS + A P G VG P+ E++++D G+ +G
Sbjct: 424 TALVTIIQGYGMTESSAMCALLTPKFFQYGCVGCPMPSVEVRLIDVAEAGYFANGNPPQG 483
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+ +RG V QGY+K P TK+++ DGWL TGD+G P G L + R
Sbjct: 484 EICIRGPSVTQGYYKRPEITKESITPDGWLLTGDVGQWNPD----------GTLCIIDRK 533
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG-QDQRRPGAIIVPDKEEVLMAAKRL- 414
K+ + LS GE + LE A S ++ I V+ D ++P A++ P +E+ L +A R
Sbjct: 534 KNLVKLSGGEYIAIERLESAYKASGVVSNICVVASSDAKQPMAVVFP-REDALRSALREN 592
Query: 415 ---SIVHADASELSKEKTISLL 433
S+ S+L EK +S +
Sbjct: 593 GKDSLADKQLSDLCHEKEVSQM 614
>gi|417843442|ref|ZP_12489516.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21127]
gi|341949585|gb|EGT76188.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21127]
Length = 602
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 166/366 (45%), Gaps = 47/366 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 131
D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE +Y
Sbjct: 219 DISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSTLTEIRPTLMCAVPRFYEKIY 278
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ + ++ + R+++ I + + F L N K +L
Sbjct: 279 AAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIPFL---------- 319
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GYG+
Sbjct: 320 -----LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGM 374
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ S+G + E+KI E NE+L VRG VM+GY+
Sbjct: 375 TETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYY 423
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T QA EDG+L TGD G G L + R K+ + S G+ + P
Sbjct: 424 KKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAP 473
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + + QI +I ++ A+IVP + + AK+L+I + D EL K I
Sbjct: 474 QYIESKIGKDKFVEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDI 533
Query: 431 SLLYGE 436
++ +
Sbjct: 534 LKMFEQ 539
>gi|295086341|emb|CBK67864.1| Long-chain acyl-CoA synthetases (AMP-forming) [Bacteroides
xylanisolvens XB1A]
Length = 604
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 184/398 (46%), Gaps = 57/398 (14%)
Query: 73 DKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP +E
Sbjct: 221 DKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + IR+ RI+ +D+L
Sbjct: 281 VYAGVQEKINETAGLKKALMLDAIRVG-------RIHN-----------------LDYLR 316
Query: 190 ARIICAILWPL-HLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQV 246
++ L + EK +Y ++ IGI + G ++P I+ F ++G+ + V
Sbjct: 317 LGKTPPVMNQLKYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVV 376
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 377 GYGLTESTATVSCTLPVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTIT 425
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GY+K AT A++ DGW +TGD G+ G L L R KD S G+
Sbjct: 426 KGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGK 474
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
V P LE + I QI +I ++ A+IVP V A+ I + D EL K
Sbjct: 475 YVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAEEKGIKYKDMEELLK 534
Query: 427 EKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ R T + F QI ++ EPF++
Sbjct: 535 HPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|402823115|ref|ZP_10872555.1| long-chain acyl-CoA synthetase [Sphingomonas sp. LH128]
gi|402263373|gb|EJU13296.1| long-chain acyl-CoA synthetase [Sphingomonas sp. LH128]
Length = 605
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 185/397 (46%), Gaps = 65/397 (16%)
Query: 75 FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP H YE G ++ G ++ Y+ + L +++ +P M+ VP ++E L +
Sbjct: 235 FLSFLPLSHAYEHTGGQWLPIGLGGQIYYSEGLDKLAANIEEVRPTVMVVVPRLFEVLRT 294
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I KQI A VA L+ + +R+ N K+ L+D+
Sbjct: 295 RIMKQIEKQGA----VANRLMDWAIG-GGMRRL--------NGKR-----GLLDY----- 331
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
PL L+ E+ + KI++ G KA VSGG L I +F++A+G+ + GYG T
Sbjct: 332 ------PLDLVIERTLRPKIRARFGGRMKALVSGGAPLNPEIGVFFDAMGLTLLQGYGQT 385
Query: 252 ESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
ES P+I+ RP+ V +VG P+ E++I + G + VRG VM GY+
Sbjct: 386 ESGPIISCNRPSAGVKFDTVGPPMRGVEVRIA-----------ADGEILVRGELVMSGYW 434
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
+N +AT L +DGWL+TGDIG I RGR + + R KD IV G+NV P
Sbjct: 435 QNEAATANVL-KDGWLHTGDIGHI---DDRGR-------IAITDRKKDMIVNDKGDNVSP 483
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
++E I Q +V G + +IVPD + L A+ + + + K + +
Sbjct: 484 QKVESMLTLQPEIAQTMVYGDRKPYIVGLIVPDADWALQWARD----NGETFDFRKLQGL 539
Query: 431 SLLYGELRKWTSKCSFQIGPIHVV------DEPFTVN 461
LR + + + I V DEPF++
Sbjct: 540 PAFRTALRNAIDRVNADLSVIEKVRQYAFADEPFSIE 576
>gi|378717408|ref|YP_005282297.1| putative long-chain-fatty-acid--CoA ligase [Gordonia
polyisoprenivorans VH2]
gi|375752111|gb|AFA72931.1| putative long-chain-fatty-acid--CoA ligase [Gordonia
polyisoprenivorans VH2]
Length = 594
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 159/336 (47%), Gaps = 52/336 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G L LP HV+ R G+ L +T + NL DDL ++P+Y++SVP V+E +
Sbjct: 221 GKSTLLFLPLAHVFARVVAVGCVENGVILGHTNDIPNLIDDLAVFKPNYVLSVPRVFEKV 280
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +++ + A I ++ A ++ G LT
Sbjct: 281 YNSAKQKAYDGGKGSIFDKAADTAIEYS-KATEKGSVGLVLTIK---------------- 323
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYG 249
H + + LVY K+++A+G + G +SGG L + F+ +G+ V GYG
Sbjct: 324 ----------HKIFDALVYNKLRAALGGNCEGAISGGAPLGARLGHFFRGVGIPVYEGYG 373
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
L+E++ + A +GSVG P+ + I AE EVL ++G V GY
Sbjct: 374 LSETTAAVTANNEDHQRVGSVGRPVPGVSVAI--AEDGEVL---------LKGPVVFTGY 422
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ NP AT +A+ +D W +TGDIG R G L + GR K+ IV + G+NV
Sbjct: 423 WHNPEATAEAIHDD-WFHTGDIG-----------RLEDGYLYITGRKKELIVTAGGKNVS 470
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P +LE+A ++ Q +V+G ++ GA+I D E
Sbjct: 471 PAQLEDAIRAHPMVSQCLVVGDNKPFIGALITIDPE 506
>gi|417840982|ref|ZP_12487090.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M19501]
gi|341950793|gb|EGT77380.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M19501]
Length = 602
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 166/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDVSLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ IG+ +++GY
Sbjct: 320 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHVIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G I E+KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLIPKAEVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQAFTEDGFLKTGDAGEFDKQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 532 DILKMFEQ 539
>gi|222480622|ref|YP_002566859.1| AMP-dependent synthetase and ligase [Halorubrum lacusprofundi ATCC
49239]
gi|222453524|gb|ACM57789.1| AMP-dependent synthetase and ligase [Halorubrum lacusprofundi ATCC
49239]
Length = 685
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 165/361 (45%), Gaps = 69/361 (19%)
Query: 76 LSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 133
LS LP HV+ER G Y +F+ G + Y + L++D +P SVP VYE LY
Sbjct: 277 LSFLPLAHVFERMAGHYMMFAAGATVGYAESPDTLREDFGLVRPTTTTSVPRVYEKLYDA 336
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
I++Q S R+ +A K +E +P ++
Sbjct: 337 IREQAGESPVKERI-------FEWAVGVGKAHHEA-------DEPGAVL--------NAK 374
Query: 194 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
CA+ A++LV+ ++ AIG + +SGGGSL + Y A+ + + GYGLTE
Sbjct: 375 CAV-------ADRLVFSSVREAIGGNIDFFISGGGSLSAELCALYHAMDLPILEGYGLTE 427
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV---LPAGSKGIVKVRGSQVMQGY 309
+SPVI+ P +G++G P+ TE+ I A E LP G G + VRG QV GY
Sbjct: 428 TSPVISVNPPEEPKVGTIGPPVVDTEVAIDGAVVGEEVADLP-GDVGELLVRGPQVTDGY 486
Query: 310 FKNPSATKQALD-----------------------EDGWLNTGDIGWIAPHHSRGRSRRC 346
+ P AT +A +D W TGDI + P
Sbjct: 487 WNRPDATAEAFTDPDRLPEDAVVAGDPPEERGGDPDDPWFRTGDIVQLRPD--------- 537
Query: 347 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 406
G + RAK +VLSTG+NV P +E+ + + Q VV+G ++ A+IVP+ E+
Sbjct: 538 -GYIAFRERAKQLLVLSTGKNVAPGPIEDRFAANEFVEQCVVLGDGRKFVSALIVPNFEK 596
Query: 407 V 407
+
Sbjct: 597 L 597
>gi|313676617|ref|YP_004054613.1| amp-dependent synthetase and ligase [Marivirga tractuosa DSM 4126]
gi|312943315|gb|ADR22505.1| AMP-dependent synthetase and ligase [Marivirga tractuosa DSM 4126]
Length = 586
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 169/366 (46%), Gaps = 63/366 (17%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYS 132
K LS LP H++ER YF RG+ + Y + + D+L+ QP +VP + E +Y
Sbjct: 212 KSLSFLPLCHIFERTSVYFYLYRGVAVYYAENLEKIGDNLKEVQPDMFTTVPRLLEKIYD 271
Query: 133 GIQKQIFTSSAARRVVARAL----IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
++VA+ + ++ S + A G RN+ Q ++
Sbjct: 272 -------------KIVAKGMDLTGVKKSLFFWALNL---GHKFDRNKNQGAW-------- 307
Query: 189 WARIICAILWPLHL-LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
+ L LA KL++ K + A+G + K SGG +L + + + + V
Sbjct: 308 ---------YNFQLRLANKLIFSKWREAVGGNIKLIASGGAALQPRLATIFWSAQIPVLE 358
Query: 247 GYGLTESSPVIAARRPTCN--VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 304
YGLTE+SP IA R ++G+VG + EIKI AE EVL +G
Sbjct: 359 AYGLTETSPGIAFNRYNKEDMLIGTVGPALPGVEIKI--AEDGEVL---------AKGPN 407
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
+M+GY+ P T + +D+DGW +TGDIG + G L + R K+ S
Sbjct: 408 IMKGYYNQPEKTDEVIDKDGWFHTGDIGEMV----------NGKFLKITDRKKEMFKTSG 457
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 424
G+ V P +E S+LI +V+G Q+ PGA+IVP+ + + I ++ +E+
Sbjct: 458 GKYVAPQYIENKLKESTLIEMAMVVGDGQKFPGALIVPNFDALREWCHHKGIAYSSGAEM 517
Query: 425 SKEKTI 430
K++ I
Sbjct: 518 VKQQNI 523
>gi|417846422|ref|ZP_12492429.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21639]
gi|341952560|gb|EGT79085.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21639]
Length = 608
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 167/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 225 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 284
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 285 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIPFL-------- 327
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 328 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 380
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 381 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--RENNEIL---------VRGGMVMKG 429
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 430 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 479
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 480 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 539
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 540 EILKMFEQ 547
>gi|323492601|ref|ZP_08097746.1| long-chain-fatty-acid--CoA ligase [Vibrio brasiliensis LMG 20546]
gi|323313159|gb|EGA66278.1| long-chain-fatty-acid--CoA ligase [Vibrio brasiliensis LMG 20546]
Length = 602
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 177/388 (45%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y +++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVREALSEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + + PS +
Sbjct: 280 SAIHEKVAKAPFIRKVL--------FTWAVNMGAKMALC-HQEGRNPSVM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKKSYALADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI D NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDKCFNPDSIGMSMPGAQVKIGD--NNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETAKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|350530149|ref|ZP_08909090.1| hypothetical protein VrotD_03450 [Vibrio rotiferianus DAT722]
Length = 602
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + A + +++PS +
Sbjct: 280 SAIHEKVSRAPFHRKIMFTWAVNMGAKMAA---------CHQEKRKPSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 425 KMLEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIAYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|429888249|ref|ZP_19369739.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae PS15]
gi|429224692|gb|EKY31030.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae PS15]
Length = 601
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G + + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNVFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|425065789|ref|ZP_18468909.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida P1059]
gi|404383284|gb|EJZ79738.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida P1059]
Length = 606
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 170/366 (46%), Gaps = 47/366 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 131
D LS LP H++ERA ++ RG Y N +++ L +P M +VP YE +Y
Sbjct: 223 DSSLSFLPLSHIFERAWVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIY 282
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ + ++ + RR++ I + F+ I +QK+P
Sbjct: 283 TAVWDKVQKAPLFRRMIFNWAIAV--GQKRFQFI--------SQKKP------------- 319
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
I +L + LA+KLV K++ +G + GG L +I LF+ +IG+ V++GYG+
Sbjct: 320 -IPFVLRQQYALADKLVLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGM 378
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ S+G + E+KI E NE+L VRG VM+GY+
Sbjct: 379 TETTATVSCWEEGHFEPNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYY 427
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + EDG+L TGD G P G L + R K+ + S G+ + P
Sbjct: 428 KKPQETADSFTEDGFLKTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAP 477
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + I QI VI ++ A+IVP + AK+L+I + D EL K I
Sbjct: 478 QYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDI 537
Query: 431 SLLYGE 436
++ +
Sbjct: 538 LQMFEQ 543
>gi|422923777|ref|ZP_16956920.1| AMP-binding enzyme family protein [Vibrio cholerae BJG-01]
gi|341643515|gb|EGS67800.1| AMP-binding enzyme family protein [Vibrio cholerae BJG-01]
Length = 601
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++ +G Y V ++++ L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + Q+QPS++
Sbjct: 280 SAIHEKVAKAPFVRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H A+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T ++ DE G+L TGD G I + G + + R K+ + S G+ + P
Sbjct: 425 KLDKETAESFDEHGFLKTGDAGHIDEN----------GNVFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 LEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|108805260|ref|YP_645197.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108766503|gb|ABG05385.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 612
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 169/352 (48%), Gaps = 49/352 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI--FSRGIELMYTAVRNLKDDLQRYQ 116
+ ++ ++VP + D LS+LP HV ER C F+ G + +V ++++L +
Sbjct: 216 NLEAIIEVVPITDDDVGLSILPLSHVLERTCSQFLNLVGGGTNYIAESVEKVQENLLEVR 275
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P ++ VP ++E +++ I++Q T++ R + + +R + E L R
Sbjct: 276 PTALLVVPRLFERVFAVIREQ-GTANPVRARIFESAVRTARRKYRHDAGEEAMSLARR-- 332
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+L+ L+ L LVY+K+++ +G + VSGG L +
Sbjct: 333 -------------------LLFGLYDL---LVYRKVRAGLGGRVRFCVSGGARLEPWLGE 370
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ GV V GYGLTE+SPVI+ R G+VG P+ + E+++ +
Sbjct: 371 FFYGAGVPVAEGYGLTETSPVISVNRFEDLRFGTVGPPLPNVEVRL-----------SGE 419
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G + VRG V GY P A +DG+ TGDIG S GG L + R
Sbjct: 420 GEILVRGPSVTPGYHNLPEENAAAFTQDGFFRTGDIG----------SFDEGGRLKITDR 469
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
AKD +VL TG+NV P +E A ++ I Q +++G ++ A+IVPD E V
Sbjct: 470 AKDIMVLDTGKNVAPQPVETALANTAHIAQAMLVGDGRKFVSALIVPDFEAV 521
>gi|15602790|ref|NP_245862.1| FadD protein [Pasteurella multocida subsp. multocida str. Pm70]
gi|383309925|ref|YP_005362735.1| long-chain acyl--CoA synthetase [Pasteurella multocida subsp.
multocida str. HN06]
gi|12721245|gb|AAK03009.1| FadD [Pasteurella multocida subsp. multocida str. Pm70]
gi|380871197|gb|AFF23564.1| long-chain acyl--CoA synthetase [Pasteurella multocida subsp.
multocida str. HN06]
Length = 606
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 170/366 (46%), Gaps = 47/366 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 131
D LS LP H++ERA ++ RG Y N +++ L +P M +VP YE +Y
Sbjct: 223 DSSLSFLPLSHIFERAWVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIY 282
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ + ++ + RR++ I + F+ I +QK+P
Sbjct: 283 TAVWDKVQKAPLFRRMIFNWAIAV--GQKRFQFI--------SQKKP------------- 319
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
I +L + LA+KLV K++ +G + GG L +I LF+ +IG+ V++GYG+
Sbjct: 320 -IPFVLRQQYALADKLVLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGM 378
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ S+G + E+KI E NE+L VRG VM+GY+
Sbjct: 379 TETTATVSCWEEGHFEPNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYY 427
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + EDG+L TGD G P G L + R K+ + S G+ + P
Sbjct: 428 KKPQETADSFTEDGFLKTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAP 477
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + I QI VI ++ A+IVP + AK+L+I + D EL K I
Sbjct: 478 QYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDI 537
Query: 431 SLLYGE 436
++ +
Sbjct: 538 LQMFEQ 543
>gi|378773920|ref|YP_005176163.1| putative long-chain-fatty-acid--CoA ligase [Pasteurella multocida
36950]
gi|356596468|gb|AET15194.1| putative long-chain-fatty-acid--CoA ligase [Pasteurella multocida
36950]
Length = 606
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 170/366 (46%), Gaps = 47/366 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 131
D LS LP H++ERA ++ RG Y N +++ L +P M +VP YE +Y
Sbjct: 223 DSSLSFLPLSHIFERAWVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIY 282
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ + ++ + RR++ I + F+ I +QK+P
Sbjct: 283 TAVWDKVQKAPLFRRMIFNWAIAV--GQKRFQFI--------SQKKP------------- 319
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
I +L + LA+KLV K++ +G + GG L +I LF+ +IG+ V++GYG+
Sbjct: 320 -IPFVLRQQYALADKLVLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGM 378
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ S+G + E+KI E NE+L VRG VM+GY+
Sbjct: 379 TETTATVSCWEEGHFEPNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYY 427
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + EDG+L TGD G P G L + R K+ + S G+ + P
Sbjct: 428 KKPQETADSFTEDGFLKTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAP 477
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + I QI VI ++ A+IVP + AK+L+I + D EL K I
Sbjct: 478 QYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDI 537
Query: 431 SLLYGE 436
++ +
Sbjct: 538 LQMFEQ 543
>gi|313204617|ref|YP_004043274.1| amp-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
gi|312443933|gb|ADQ80289.1| AMP-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
Length = 600
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 166/364 (45%), Gaps = 50/364 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR--NLKDDLQRYQPHYMISVPLVYE 128
+ D ++ LP HV+ER YF +G+ + Y +R ++ ++ P M +VP +E
Sbjct: 220 DKDTSIAFLPLSHVFERTWCYFCIFKGVTI-YINLRPTEIQQTIKDVHPTLMCAVPRFWE 278
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+G+++ + S V I++A KR + R KQP +
Sbjct: 279 KVYAGVKENLSKYSPIMLGV------IAWAVATGKR--HNVDILRKGKQPDVFLKF---- 326
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQV 246
+ +A+KL++ K++ +GI A + + G L I LF+ +IGV +
Sbjct: 327 -----------GYSIADKLIFSKVKETLGIENANMLPTAGAKLSDEIALFFRSIGVPIVY 375
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+ + +G+VG+ + +KI D NE+L ++G +
Sbjct: 376 GYGLTESTATVCCYEYVGYEIGTVGNIMPDVSVKIGD--DNEIL---------LKGKTIF 424
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY+ NP A + EDGW TGD G+I + +VL R KD S G+
Sbjct: 425 PGYYNNPEANAASFTEDGWFKTGDAGYIKDNK-----------IVLTERIKDLFKTSNGK 473
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 426
+ P E+E I Q+ VIG ++ AII P+ + A++ SI + + +L K
Sbjct: 474 YIAPQEIETRLALDKYIEQVAVIGDERNYVTAIIAPNIPALEEYAQKHSITYENIDDLLK 533
Query: 427 EKTI 430
I
Sbjct: 534 SPKI 537
>gi|77164343|ref|YP_342868.1| AMP-dependent synthetase and ligase [Nitrosococcus oceani ATCC
19707]
gi|254434511|ref|ZP_05048019.1| AMP-binding enzyme, putative [Nitrosococcus oceani AFC27]
gi|76882657|gb|ABA57338.1| AMP-dependent synthetase and ligase [Nitrosococcus oceani ATCC
19707]
gi|207090844|gb|EDZ68115.1| AMP-binding enzyme, putative [Nitrosococcus oceani AFC27]
Length = 601
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 174/353 (49%), Gaps = 50/353 (14%)
Query: 67 VPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVP 124
P D FLS LP H ER GY++ G ++ YT ++ L +DL +P ++SVP
Sbjct: 219 TPIYEDDLFLSFLPLSHSLERTLGYYLPMMAGAQVAYTRSIAKLAEDLVTIKPTVLVSVP 278
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
++E +++ QI+ + ++ RAL +++ A G+ +Q +Y
Sbjct: 279 RIFERVHN----QIYDKLREKTLLERALFKLAIA--------AGW------RQFNYQQGR 320
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
W +C L+ L ++V +++ + G + V GG L ++ A+G+
Sbjct: 321 APW---HPLCL----LNPLLRQIVGRQVLAQFGGRLRIVVCGGAPLVFNVARELLALGLP 373
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
+ GYGLTE+SPVI+ N SVG P+ EI+I E NE+L R
Sbjct: 374 LIQGYGLTEASPVISGNSLNNNDPKSVGTPLQDVEIRI--GEHNELLG---------RSP 422
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM GY+ NP AT + +DE+GWL+TGD ++R G L + GR K+ IVL+
Sbjct: 423 GVMLGYWNNPKATAEVIDEEGWLHTGD-----------QARIEQGRLYITGRIKEIIVLA 471
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
TGE V P E+E A L Q +V+G+ + A+IV + E A+ L++
Sbjct: 472 TGEKVPPGEMETAIGTDPLFDQAMVVGEGKPYLSALIVVNPEHWNTLAQELNL 524
>gi|159900246|ref|YP_001546493.1| AMP-dependent synthetase/ligase [Herpetosiphon aurantiacus DSM 785]
gi|159893285|gb|ABX06365.1| AMP-dependent synthetase and ligase [Herpetosiphon aurantiacus DSM
785]
Length = 594
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 190/408 (46%), Gaps = 56/408 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQP 117
++ ++ + + GD + LP H++ R G+ + +++ + +D+Q +P
Sbjct: 207 ELTAIRTTMAMQAGDDDVLFLPAAHIFGRLQHMCGVDNGLNTAIIESIKQVLEDVQAIKP 266
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
+ SVP +YE ++S Q + S +R+ A AL A R ++R + Q
Sbjct: 267 TFFFSVPRMYEKIFSTAQARAEASPIRKRIFAWAL--------AIAR-----QMSRYKGQ 313
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 236
+ + A +A LA++LV+KK+++ +G + + ++GG L + I F
Sbjct: 314 KAAVPAAFKLKYA------------LADRLVFKKVRALLGGNIRYAITGGAPLDIEILEF 361
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+ GV + G+GLTE+S + A RP LG+VG EIKI D G
Sbjct: 362 FNGAGVLLLEGWGLTETSAAVTANRPDDYRLGTVGKVFPGNEIKIAD-----------DG 410
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
V VRG+ ++ GY+ NP T +AL DGW +TGDIG I G L + R
Sbjct: 411 EVLVRGNLILSGYYNNPQKTNEAL-IDGWFHTGDIGKI----------DADGFLSIVDRK 459
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG--AIIVPDKEEVLMAAKRL 414
KD ++ ++G+N+ P +E A S I Q V G RRP A+ D E V A R
Sbjct: 460 KDLLITASGKNIAPQAVEAAFKNSPYISQCAVFG--DRRPYLVALFTLDMEAVTAWANR- 516
Query: 415 SIVHADASELSKEKTISLLYGELRKWTSKC-SF-QIGPIHVVDEPFTV 460
V DA+ K ++ + E++ SF QI ++ E FT+
Sbjct: 517 EHVPVDANLHKHPKLVAAIEHEVQTINPTLPSFEQIKAYEILPEDFTI 564
>gi|448391685|ref|ZP_21566780.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
gi|445665097|gb|ELZ17775.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
Length = 660
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 168/343 (48%), Gaps = 52/343 (15%)
Query: 74 KFLSMLPPWHVYERACGYF-IFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ LS+LP HV+ER G+F +F+ G + Y + +DL +VP VYE LY
Sbjct: 266 RALSVLPLAHVFERTAGHFMLFAAGACIAYGESPETFAEDLGAVGATSTTAVPRVYEKLY 325
Query: 132 SGIQKQIFTSSAARRVVARAL---IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
GI++ S+AA AL + ++ Y A ++ S L
Sbjct: 326 DGIRE----SAAADEDTKEALEWALDVARRYNA--------ADDPGEELESELAD----- 368
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
A++LV+ I+ +G + + VSGGGSL + + +G+ + G
Sbjct: 369 ---------------ADELVFATIREKLGGNIEFLVSGGGSLSPDLCQLFHTMGLSIVEG 413
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET--NEVL-PAGSKGIVKVRGSQ 304
YG+TE+SPVIA +P+ +G+VG + E K+ DA +E G+ G + VRG
Sbjct: 414 YGMTETSPVIATNQPSDPRVGTVGPALAGVETKL-DASVVRDEAFDDEGTVGELLVRGPN 472
Query: 305 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 364
V +GY++ P AT +A E GWL TGDI R G L R K +VLST
Sbjct: 473 VTEGYWEKPGATDRAFTEAGWLRTGDI----------VHERPDGYLEFRERTKQLLVLST 522
Query: 365 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
G+NV P LE+A ++ Q +V+G ++ GA++VP+ +E+
Sbjct: 523 GKNVAPGPLEDAFASVDVVEQAMVVGDGEKFVGALLVPNVDEL 565
>gi|329954188|ref|ZP_08295283.1| AMP-binding enzyme [Bacteroides clarus YIT 12056]
gi|328528165|gb|EGF55145.1| AMP-binding enzyme [Bacteroides clarus YIT 12056]
Length = 593
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 184/410 (44%), Gaps = 61/410 (14%)
Query: 63 LYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHY 119
++DI DK +SM LP HV+E+A Y RG+++ + +++ ++ +P
Sbjct: 203 IHDIRLTAMTDKDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPADIQTTIKEVRPTL 262
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
M SVP +E +Y+G+Q++I + R+ + I++ +
Sbjct: 263 MCSVPRFWEKVYAGVQEKIAQETGLRKAMMLDAIKVGKMHN------------------- 303
Query: 180 YLVALIDWLWARIICAILWPLHL---LAEKLVYKKIQSAIGISKAGV--SGGGSLPMHID 234
ID+L R+ LHL EK +Y ++ IGI + G ++ I
Sbjct: 304 -----IDYL--RVGKTPPLMLHLKYKFYEKTIYALLKKTIGIENGNFFPTAGAAVSDEIC 356
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 357 EFVHSVGINMVVGYGLTESTATVSCFLDKGYEIGSVGTVMPDLEVKI--GENNEIL---- 410
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+RG + GY+K P AT A+D+DGW +TGD G++ H L L
Sbjct: 411 -----LRGKTITTGYYKKPEATAAAIDKDGWFHTGDAGYLKDDH-----------LYLTE 454
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R KD S G+ + P LE I QI +I ++ A+IVP V AK
Sbjct: 455 RIKDLFKTSNGKYISPQALETKLAIDRYIDQIAIIADQRKFVSALIVPVYGLVKNYAKEK 514
Query: 415 SIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
+ + D ++L + + L+ R T + F Q+ ++ EPF +
Sbjct: 515 GLEYKDMADLLQHPKVQALF-RARIDTLQQQFANYEQVKRFTLLPEPFNM 563
>gi|312139004|ref|YP_004006340.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311888343|emb|CBH47655.1| putative acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 597
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 166/339 (48%), Gaps = 49/339 (14%)
Query: 69 AENGDKFLSMLPPWHVYERACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 127
A G++ L+ LP HV RA +F + GI+ ++ + + +R++P+ ++ VP V+
Sbjct: 216 ARPGNRMLTFLPLAHVLARAVSLAMFEAGGIQAHWSNFGTVAEQFERFRPNVILGVPRVF 275
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E ++ S+A + R +FA+ I + + + PS+L
Sbjct: 276 E--------KVRDSAAHTASKGGPIARAAFAFAESTAIE--YSESLDAGGPSFL------ 319
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQV 246
L AR H LA++LV++K+++A+G +SGGG+L + F+ G+ +
Sbjct: 320 LKAR---------HALADRLVFRKLRAAMGDECWWAISGGGALMPRLGHFFRGAGIPIFE 370
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+ P +G+VG P++ ++I + G +++ G V
Sbjct: 371 GYGLTESTAAHCVNVPGEQKIGTVGRPMSGNSVRIA-----------ADGEIELAGGVVF 419
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY++N AT D DGW+ TGD+G + G L+L GR KD +V + G+
Sbjct: 420 GGYWRNEEATVDVFD-DGWMRTGDLGELDDD----------GYLILTGRKKDLLVTAGGK 468
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
NV P LE+ ++LI Q VV+G + GA++ D E
Sbjct: 469 NVSPGPLEDRLRSNALISQAVVVGDGRPFIGALLTLDPE 507
>gi|430760345|ref|YP_007216202.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430009969|gb|AGA32721.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 633
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 163/346 (47%), Gaps = 46/346 (13%)
Query: 58 FQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRY 115
F +++ V + D+ LS LP H ER GY+ + G+ + Y ++ L +DL
Sbjct: 233 FNVQACLRAVQVSSRDRMLSFLPLSHALERTVGYYTPIAAGMTVAYARSISQLAEDLLTV 292
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
+P +++VP ++E I +++ R+ + FA+T +E F + +
Sbjct: 293 RPTILVAVPRIFERAQERILERVEAGPRLRQRL--------FAWT-LASGWEAFLHEQGR 343
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL 235
+ R +L P LL + + G + +SGG LP +
Sbjct: 344 GR------------RRWSDGLLHP--LLDRLVARRVRVRFGGRLRFAISGGAPLPEAVGR 389
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F+ ++GV + GYGLTE+SPVI+ R N +VG + E+++ GS+
Sbjct: 390 FFLSLGVPIVQGYGLTETSPVISVNRLEDNEPTTVGPALPGVEVRV-----------GSQ 438
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
+ R VM GY+ NP AT+Q +D D W +TGD I P G + + GR
Sbjct: 439 SELLTRSPSVMMGYWNNPDATRQVIDGDHWFHTGDRACIGPR----------GHITITGR 488
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 401
KD +VLS GE V P ++E+A S L+ Q++V+G + GA++V
Sbjct: 489 LKDILVLSNGEKVAPADVEQALAGSPLVEQVLVVGDSRPYLGALVV 534
>gi|345514651|ref|ZP_08794159.1| hypothetical protein BSEG_04301 [Bacteroides dorei 5_1_36/D4]
gi|229438083|gb|EEO48160.1| hypothetical protein BSEG_04301 [Bacteroides dorei 5_1_36/D4]
Length = 601
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 48/369 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D ++ LP HV+ERA + S G L + +++ ++ +P M SVP +E
Sbjct: 221 DQDVIMNFLPFTHVFERAWTCWCLSMGCTLSINLRPADIQKTIKEIRPTAMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + I++ + +Y+G P
Sbjct: 281 VYAGVQEKINETTGLKKKLMLDAIKVGREHN-LDYVYKGLT-------PP---------- 322
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
+L + EK +Y ++ IGI + G ++P + F ++G+ + G
Sbjct: 323 -----PVLHMKYKFYEKTIYSLLKKTIGIENGRFFPTAGAAIPPAVQEFVLSVGINMVAG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ +A +V+GSVG + H +++I E NE++ +RG +
Sbjct: 378 YGLTESTATVACENDNDHVVGSVGRIMPHVQVRI--GENNEIM---------LRGEGITH 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K +ATK A EDGW +TGD G+I H L L R KD S G+
Sbjct: 427 GYYKKEAATKAAFTEDGWFHTGDAGYIKDEH-----------LFLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + I QI +I +++ A+I+P+ + V A + I + EL ++
Sbjct: 476 IAPQAIEAKLVVDRYIDQISIIADERKFVSALIIPEYKLVKEYAAKKGIRYESMEELLQK 535
Query: 428 KTISLLYGE 436
I L+ E
Sbjct: 536 PEIIDLFKE 544
>gi|357976340|ref|ZP_09140311.1| AMP-dependent synthetase and ligase [Sphingomonas sp. KC8]
Length = 598
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 186/399 (46%), Gaps = 61/399 (15%)
Query: 71 NGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 128
+ + FLS LP H YE + G +F G ++ Y+ + L +++ +P M+ VP ++E
Sbjct: 222 DDEVFLSFLPLSHAYEHSGGQHFPIGLGAQIYYSEGLEKLAANIEEVRPTIMVVVPRLFE 281
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
L + ++ S + VA+ L+R L QK + + L DW
Sbjct: 282 VL----RARVLKSVEKQGRVAQYLMR--------------RALVIGQKDYAGRMPLWDW- 322
Query: 189 WARIICAILWPLHLLAEKLVYKKI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
P+ ++ + + K+ Q G KA VSGG L + LF+ ++G+ G
Sbjct: 323 ----------PMEMILRRTLKPKVGQRFGGRMKAMVSGGAPLNPEVGLFFHSLGLTFLQG 372
Query: 248 YGLTESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
YG TE++PVI+ RP+ + + +VG P+ E++I D G + VRG VM
Sbjct: 373 YGQTEAAPVISCNRPSAGIKMDTVGPPLPGVEVRIAD-----------DGEILVRGELVM 421
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY++N T + L DGWL+TGD+G I +RGR +V+ R KD IV G+
Sbjct: 422 HGYWRNEEETARVL-RDGWLHTGDVGHI---DARGR-------IVITDRKKDIIVNDKGD 470
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPG--AIIVPDKEEVLMAAKRLSIVHADASEL 424
NV P ++E I Q ++ G RRP +IVPD E A + + A+
Sbjct: 471 NVAPQKVEGMLTLEPEILQAMIAG--DRRPHIVGLIVPDPEWAREWAGAEGVAYDPAALR 528
Query: 425 SKEKTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTVN 461
+ + L + + + S ++ I + DEPFT+
Sbjct: 529 ADPRFQKALMAAVDRVNTSLSVIEKVRRILIADEPFTIE 567
>gi|417950668|ref|ZP_12593786.1| long-chain-fatty-acid--CoA ligase [Vibrio splendidus ATCC 33789]
gi|342806130|gb|EGU41368.1| long-chain-fatty-acid--CoA ligase [Vibrio splendidus ATCC 33789]
Length = 602
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 178/388 (45%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSDVKPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ + + + + EG + PS +
Sbjct: 280 SAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQ--EG-------RTPSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKKSHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + E+KI NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDRCFNPDSIGMAMPGAEVKI--GAQNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + DE G+L TGD G + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETAKTFDEHGFLKTGDAGHFDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQQELAKFEQVKKFKLLP 562
>gi|330831126|ref|YP_004394078.1| Long-chain-fatty-acid--CoA ligase [Aeromonas veronii B565]
gi|328806262|gb|AEB51461.1| Long-chain-fatty-acid--CoA ligase [Aeromonas veronii B565]
Length = 596
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 179/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L MLP HV+ERA Y++ G E +Y + + D + QP M +VP +YE Y
Sbjct: 218 DVSLCMLPLSHVFERAWSYYVLYCGAENVYIRDPQKVMDVIGEVQPTVMCAVPRLYEKAY 277
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ IQ ++ + A RR + F + R+ + TR Q S L LW
Sbjct: 278 AMIQAKVAQAPALRRAL--------FGWAT--RVGKQMVATR-QAGKSASPQLYGQLW-- 324
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYGL 250
LAE+LV++K+++ G + G L ++LF++A+G+ ++ GYG+
Sbjct: 325 -----------LAERLVFRKLRARFGGRTRFLPVAGARLADDVNLFFQAMGLNLKYGYGM 373
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ + + LGS+G +N E+K+ E NE+L VR VM+GY+
Sbjct: 374 TETTATVCCYEDSQFKLGSIGTALNGIEVKL--GENNELL---------VRSPTVMRGYY 422
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P AT + + EDG+L TGD G + G + R K+ + S G+ V P
Sbjct: 423 NKPDATAEVMTEDGFLRTGDAGELDSQ----------GNIYFTERLKELMKTSNGKYVAP 472
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E + I QI ++ + A+IVP E + A+ +++ + +EL +
Sbjct: 473 QLVEGTIGKDRFIEQIAIVADARHFVSALIVPCFESLEEYARSINLQYQCKTELLRHSRV 532
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
E I+ L EL K+ F + P
Sbjct: 533 MEFFEARIADLQKELAKFEQVKKFTLLP 560
>gi|393725592|ref|ZP_10345519.1| long-chain fatty-acid--CoA ligase [Sphingomonas sp. PAMC 26605]
Length = 601
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 162/338 (47%), Gaps = 61/338 (18%)
Query: 75 FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP H YE G YF G ++ Y+ + L +++ +P MI VP ++E L +
Sbjct: 231 FLSFLPLSHAYEHTGGQYFPIGLGAQIYYSEGLDKLAANIEEVRPTMMIVVPRLFELLRT 290
Query: 133 GIQKQIFTSSA-ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
I K + + ++ARA + + + L +DWL
Sbjct: 291 RISKAVEKQGKLSSYLLARA---------------QALGGKKAAGKAGMLDKPMDWL--- 332
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
+ A L P KIQ G KA VSGG L + F+EA+G+ V GYG
Sbjct: 333 -LGATLRP-----------KIQQRFGGRIKALVSGGAPLTPEVGTFFEAVGITVLQGYGQ 380
Query: 251 TESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
TE++PVI+ RP + + +VG P+ TE++I D G + VRG VM GY
Sbjct: 381 TETAPVISCNRPKAGLKMDTVGPPLPDTEVRIAD-----------DGEILVRGELVMHGY 429
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
++NP+ T + L ++GWL+TGDIG I ++GR R + R KD IV GENV
Sbjct: 430 WRNPAETARVL-QNGWLHTGDIGVI---DAQGRIR-------ITDRKKDIIVNDKGENVA 478
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRP--GAIIVPDKE 405
P ++E I Q ++ G RRP A+IVPD E
Sbjct: 479 PQKVEGMLTLQPEIAQAMLFG--DRRPYMVAVIVPDAE 514
>gi|326333548|ref|ZP_08199788.1| putative long-chain-fatty-acid--CoA ligase [Nocardioidaceae
bacterium Broad-1]
gi|325948657|gb|EGD40757.1| putative long-chain-fatty-acid--CoA ligase [Nocardioidaceae
bacterium Broad-1]
Length = 597
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 157/336 (46%), Gaps = 50/336 (14%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G L LP HV+ R L +T ++NL DL +QP ++++VP V+E +
Sbjct: 223 GRSTLLFLPLAHVFARIIQIGCIKSRTRLGHTPDIKNLVADLGTFQPTFVLAVPRVFEKV 282
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +A+++ VA RI T Y T K P L A
Sbjct: 283 YN---------TASQKAVADGKGRIFDMATEVAIDYS--RATETGKAPLLLTAK------ 325
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
H L KLVY K+ +A+G + + +SGG L + FY IGV V GYG
Sbjct: 326 ----------HKLFSKLVYGKLLAALGGNCSYAISGGAPLGDRLGHFYRGIGVTVLEGYG 375
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE++ + P +G+VG P+ T +++ D G + +G QV++ Y
Sbjct: 376 LTETTAALTVNLPEAFKIGTVGRPLPGTSVRVAD-----------DGELLFKGGQVLKEY 424
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
++NP+AT +A +DGW ++GD+G + G + + GR K+ +V + G+NV
Sbjct: 425 WQNPTATAEAKTDDGWFHSGDLGEVDDE----------GFVKITGRKKEILVTAGGKNVA 474
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+ L+ Q +V+G Q GAI+ D E
Sbjct: 475 PAVLEDRLRAHVLVDQCIVVGDGQPFIGAIVTIDPE 510
>gi|257464767|ref|ZP_05629138.1| putative long-chain-fatty-acid--CoA ligase [Actinobacillus minor
202]
gi|257450427|gb|EEV24470.1| putative long-chain-fatty-acid--CoA ligase [Actinobacillus minor
202]
Length = 588
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 174/391 (44%), Gaps = 67/391 (17%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYE 128
+ D LS LP H++ERA ++ RG + Y N ++ L +P M +VP +YE
Sbjct: 216 DEKDSSLSFLPFSHIFERAWVAYMLHRGATICYLENTNEVRQALMELKPSLMCAVPRLYE 275
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+ I ++ + RR + IR + ++ +GF
Sbjct: 276 KMYTAIWDKVNQAPLHRRALFHWAIRTA------QKGRKGFAFK---------------- 313
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
LA+KLV K+++ +G + + GG L I F++AIG+ +++G
Sbjct: 314 --------------LADKLVLSKLRALLGGNIRMMPCGGAKLEPAIGAFFQAIGINIKLG 359
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++ ++ + S+G + + E++I E NE+L VRG VM+
Sbjct: 360 YGMTETTATVSCWEADGFNVKSIGKLMPNAEVRI--GENNEIL---------VRGGMVMR 408
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K P T A EDG+L TGD G G L + R K+ + S G+
Sbjct: 409 GYYKKPEETASAFTEDGFLKTGDAGEFDAE----------GNLYITDRIKELMKTSNGKY 458
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK- 426
+ P +E + I QI VI ++ A+IVP + + AK+L+I + D EL K
Sbjct: 459 IAPQYIEGTLGKDKFIEQIAVIADAKKYVSALIVPCFDSLEAYAKQLNIKYQDRLELIKH 518
Query: 427 -------EKTISLLYGELRKWTSKCSFQIGP 450
EK I L EL + F + P
Sbjct: 519 SEILQMFEKRIENLQKELAHFEQVKKFTLLP 549
>gi|329964579|ref|ZP_08301633.1| AMP-binding enzyme [Bacteroides fluxus YIT 12057]
gi|328524979|gb|EGF52031.1| AMP-binding enzyme [Bacteroides fluxus YIT 12057]
Length = 645
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 176/398 (44%), Gaps = 53/398 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYET 129
+ D +S LP HV+ER Y RG ++ ++++ ++ +P M SVP +E
Sbjct: 265 DQDVSMSFLPLTHVFERGWTYVCLQRGAQVCVNLRPQDIQTTIKEIRPTVMCSVPRFWEK 324
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y G+Q++I + ++ + I++ A+ R K P ++ L
Sbjct: 325 VYQGVQERIEQETGLKKAMMLDAIKVGRAH--------NLDYLRLGKTPPLMLHL----- 371
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
+ EK VY ++ IGI + G ++ + F ++G+ + VG
Sbjct: 372 ----------KYKFYEKTVYALLKKTIGIENGTFFPTAGAAVSNEVCEFVHSVGINMVVG 421
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ ++ P VLGSVG + E+KI E NEVL +RG +
Sbjct: 422 YGLTESTATVSCFLPRNFVLGSVGEMMPDLEVKI--GENNEVL---------LRGKTITP 470
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K AT +A+D DGW +TGD G R G L L R KD S G+
Sbjct: 471 GYYKKAEATAEAIDADGWFHTGDAG-----------RLEGNTLYLTDRIKDLFKTSNGKY 519
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P LE + I QI VI +++ A+IVP V AK I + +L +
Sbjct: 520 ICPQALETQFIIDRYIDQIAVIADERKFVSALIVPVYGLVKGYAKEKGIEYQSMKDLLEH 579
Query: 428 KTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTVN 461
I L+ R T + F Q+ ++ EPF++
Sbjct: 580 PKIQALF-RARIDTLQQQFAHYEQVKRFTLLPEPFSME 616
>gi|90408867|ref|ZP_01217007.1| long-chain-fatty-acid-CoA ligase, putative [Psychromonas sp. CNPT3]
gi|90310030|gb|EAS38175.1| long-chain-fatty-acid-CoA ligase, putative [Psychromonas sp. CNPT3]
Length = 585
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 183/398 (45%), Gaps = 69/398 (17%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLY 131
DK LS LP HV+ER Y+ FS G + + ++ + D L+ +P + VP + E +Y
Sbjct: 218 DKILSCLPLAHVFERMVIYYYFSTGSPIYFADDIKKVGDILREIKPTVITMVPRLLEKVY 277
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ + +I + ++ L++++F K N Q +W++
Sbjct: 278 AKMHARINEQTGLKK----KLVKLAFTRAISK------VPAPNTAQ--------EWVY-- 317
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
+KLVY K++ A+G + + + GG +L ++ FY IG + GYGL
Sbjct: 318 -------------DKLVYSKLRDALGGNLRVLIVGGSALSTSMENFYRNIGFNIYQGYGL 364
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TESSPV+A P SVG +IKI A+ +E+L +G +M GY
Sbjct: 365 TESSPVLAVNYPGHVRYRSVGKIWPDVDIKI--ADDHEIL---------AKGPNIMIGYH 413
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
N ATK+A+D +G+L+TGD+G S G L + GR K+ S G+ V P
Sbjct: 414 NNEKATKEAIDSEGYLHTGDLG----------SVDSDGYLTITGRKKEIFKTSNGKYVSP 463
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV-----LMAAKRLS---IVHADAS 422
+ +E++ +S LI +IG+++ ++ PD E + L ++S +++D
Sbjct: 464 VPIEQSLCKSPLIDMAAIIGENKPFVSCLLFPDYENLDALRELRGCSKMSDDEFLNSDGV 523
Query: 423 ELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 460
+ + + +L W QI + +P T+
Sbjct: 524 KKEILAQVDAINAQLSTWE-----QIHKFEFIKQPITI 556
>gi|319639699|ref|ZP_07994432.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_40A]
gi|345518743|ref|ZP_08798182.1| hypothetical protein BSFG_02144 [Bacteroides sp. 4_3_47FAA]
gi|254835688|gb|EET15997.1| hypothetical protein BSFG_02144 [Bacteroides sp. 4_3_47FAA]
gi|317388663|gb|EFV69509.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_40A]
Length = 601
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 172/369 (46%), Gaps = 48/369 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D ++ LP HV+ERA + S G L + +++ ++ +P M SVP +E
Sbjct: 221 DQDVIMNFLPFTHVFERAWTCWCLSMGCTLSINLRPADIQKTIKEIRPTAMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + I++ + + +Y+G P
Sbjct: 281 VYAGVQEKINETTGLKKKLMLDAIKVGREHN-LEYVYKGLT-------PP---------- 322
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
+L + EK +Y ++ IGI + G ++P + F ++G+ + G
Sbjct: 323 -----PVLHMKYKFYEKTIYSLLKKTIGIENGRFFPTAGAAIPPAVQEFVLSVGINMVAG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ +A +V+GSVG + H +++I E NE++ +RG +
Sbjct: 378 YGLTESTATVACENDNDHVVGSVGRIMPHVQVRI--GENNEIM---------LRGEGITH 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K +ATK A EDGW +TGD G+I H L L R KD S G+
Sbjct: 427 GYYKKEAATKAAFTEDGWFHTGDAGYIKDGH-----------LFLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + I QI +I +++ A+I+P+ + V A + I + EL ++
Sbjct: 476 IAPQAIEAKLVVDRYIDQISIIADERKFVSALIIPEYKLVKEYAAKKGIRYESMEELLQK 535
Query: 428 KTISLLYGE 436
I L+ E
Sbjct: 536 PEIIDLFKE 544
>gi|340622356|ref|YP_004740808.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
gi|339902622|gb|AEK23701.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
Length = 597
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 48/371 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLY 131
D L+ LP HV+ERA ++ +G Y +K L +P M +VP YE ++
Sbjct: 221 DVSLAFLPLSHVFERAWTFYSLYKGATNHYLENPLEIKSALLEVKPTVMCAVPRFYEKVF 280
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ I +S +R+V SFA + K++ + + K+PS+
Sbjct: 281 GTVYDMISGASLVKRLV------FSFATRSGKQMLKA---KQKHKKPSWF---------- 321
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + ++EKLV+ K++ ++G + GG +L I F++AIGV V++GYG+
Sbjct: 322 -----LQKAYQISEKLVFSKLKQSLGGRIRFMPCGGANLEPSIGRFFQAIGVNVKLGYGM 376
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE+ ++ L SVG + T++KI E NE+L V+G VM+GY+
Sbjct: 377 TETLATVSCWDDIDFNLKSVGRLMPDTQMKI--GEDNEIL---------VKGGMVMKGYY 425
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
KNP T++A +DG+L TGD G + +++ + + R K+ + S G+ + P
Sbjct: 426 KNPEETQKAFTQDGFLKTGDAGNLDKYNN----------VFITDRIKELMKTSNGKYIAP 475
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KT 429
+E + ++I QI VI ++ A+IVP+ E + L+I + + ++L K +
Sbjct: 476 QHIEGKVGKDNVIDQIAVIADGRKFVSALIVPNFEVLQQMMADLNIKYKNTTDLIKNSQV 535
Query: 430 ISLLYGELRKW 440
I + L+K+
Sbjct: 536 IDFINKRLQKF 546
>gi|212692933|ref|ZP_03301061.1| hypothetical protein BACDOR_02433 [Bacteroides dorei DSM 17855]
gi|237708322|ref|ZP_04538803.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|423230143|ref|ZP_17216547.1| hypothetical protein HMPREF1063_02367 [Bacteroides dorei
CL02T00C15]
gi|423241209|ref|ZP_17222323.1| hypothetical protein HMPREF1065_02946 [Bacteroides dorei
CL03T12C01]
gi|423245809|ref|ZP_17226882.1| hypothetical protein HMPREF1064_03088 [Bacteroides dorei
CL02T12C06]
gi|212664518|gb|EEB25090.1| AMP-binding enzyme [Bacteroides dorei DSM 17855]
gi|229457543|gb|EEO63264.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|392631652|gb|EIY25621.1| hypothetical protein HMPREF1063_02367 [Bacteroides dorei
CL02T00C15]
gi|392637837|gb|EIY31699.1| hypothetical protein HMPREF1064_03088 [Bacteroides dorei
CL02T12C06]
gi|392642357|gb|EIY36124.1| hypothetical protein HMPREF1065_02946 [Bacteroides dorei
CL03T12C01]
Length = 601
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 48/369 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D ++ LP HV+ERA + S G L + +++ ++ +P M SVP +E
Sbjct: 221 DQDVIMNFLPFTHVFERAWTCWCLSMGCTLSINLRPADIQKTIKEIRPTAMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + I++ + +Y+G P
Sbjct: 281 VYAGVQEKINETTGLKKKLMLDAIKVGREHN-LDYVYKGLT-------PP---------- 322
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
+L + EK +Y ++ IGI + G ++P + F ++G+ + G
Sbjct: 323 -----PVLHMKYKFYEKTIYSLLKKTIGIENGRFFPTAGAAIPPAVQEFVLSVGINMVAG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ +A +V+GSVG + H +++I E NE++ +RG +
Sbjct: 378 YGLTESTATVACENDNDHVVGSVGRIMPHVQVRI--GENNEIM---------LRGEGITH 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K +ATK A EDGW +TGD G+I H L L R KD S G+
Sbjct: 427 GYYKKEAATKAAFTEDGWFHTGDAGYIKDEH-----------LFLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + I QI +I +++ A+I+P+ + V A + I + EL ++
Sbjct: 476 IAPQAIEAKLVVDRYIDQISIIADERKFVSALIIPEYKLVKEYAAKKGIRYESMEELLQK 535
Query: 428 KTISLLYGE 436
I L+ E
Sbjct: 536 PEIIDLFKE 544
>gi|332525397|ref|ZP_08401558.1| AMP-dependent synthetase and ligase [Rubrivivax benzoatilyticus
JA2]
gi|332108667|gb|EGJ09891.1| AMP-dependent synthetase and ligase [Rubrivivax benzoatilyticus
JA2]
Length = 582
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 161/324 (49%), Gaps = 47/324 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H +ER GY++ + G + + + ++L +D++ +P +ISVP +YE +
Sbjct: 204 DVFLSFLPLSHTFERTAGYYLPIAAGATVAFARSTQHLPEDMKTVRPTVLISVPRIYERV 263
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
+ +Q + S+ +R+ A ++R FC + P + A D
Sbjct: 264 FVKLQTMLEGSALKKRLFEMA------QAVGWRR----FCRAQKLPVPGSVPAAWD---- 309
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
A++WPL LA + V +Q+ G + VSGG +L I + +G+ + GYG
Sbjct: 310 ----ALVWPL--LASR-VSAPLQAQFGGRLRLAVSGGAALSAPIARCFLGLGLPIVQGYG 362
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
+TES+PVI+ P N +VG P++ E++I D E+L VRG VM+GY
Sbjct: 363 MTESTPVISCNTPEDNDPATVGRPLDGVEVRIGD--NRELL---------VRGPNVMRGY 411
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ P T +AL E GWL+TGD ++ GG + + GR K+ IV +TGE +
Sbjct: 412 WNRPEDTARAL-EGGWLHTGD-----------QASLDGGRIRIVGRVKEIIVTATGEKIA 459
Query: 370 PLELEEAALRSSLIRQIVVIGQDQ 393
P +LE A + L G ++
Sbjct: 460 PTDLEMAIVADPLFEAAWAFGDNR 483
>gi|315604688|ref|ZP_07879751.1| long-chain-fatty-acid--CoA ligase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315313700|gb|EFU61754.1| long-chain-fatty-acid--CoA ligase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 627
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 161/369 (43%), Gaps = 64/369 (17%)
Query: 39 FSFVLIDLNTWMPIPKMTNFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRG 97
F+ + ++ + WMP + A + L LP HV+ R F I G
Sbjct: 229 FTNLCLNAHAWMPE--------------IAAGTTSRLLLFLPLAHVFARFLQVFQISGNG 274
Query: 98 IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 157
+ ++NL DL ++P Y++ VP V E +Y+ + S +R V R +++
Sbjct: 275 VMGHAPNIKNLLPDLASFRPSYLLVVPRVLEKIYNSADTK---SRGPKRKVFRWAAKVAI 331
Query: 158 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 217
AY+ EG PS A L H LA+KLVY++I +G
Sbjct: 332 AYSRALDTDEG---------PS---------------ASLKAQHALADKLVYQQIIRLVG 367
Query: 218 ISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 276
+ + SGG L + FY IG+ V GYGLTE+ ++ P + +G+VG +
Sbjct: 368 GNADYIISGGAPLATWLAHFYRGIGIPVLEGYGLTETVGPVSVNTPRLSKIGTVGPALPP 427
Query: 277 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 336
KI D G + ++G V QGY +P AT +DGW TGD+G
Sbjct: 428 MSFKISD-----------DGEILLKGPSVFQGYNNDPGATAACFTDDGWFRTGDLG---- 472
Query: 337 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 396
S G + + GRAKD IV + G+NV P LE LI Q++V+G +
Sbjct: 473 ------SLDRDGYVSITGRAKDIIVTAGGKNVTPASLENPMRSHPLISQVLVVGDQRPFV 526
Query: 397 GAIIVPDKE 405
A+I D E
Sbjct: 527 AALITLDAE 535
>gi|302525577|ref|ZP_07277919.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
gi|302434472|gb|EFL06288.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
Length = 598
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 164/351 (46%), Gaps = 53/351 (15%)
Query: 59 QIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRY 115
+IR+ + P E G+ L LP H+ RA + + L +T V+NL DL +
Sbjct: 208 EIRADIEAFPELMEQGNSLLCFLPLAHILARAIAITALTARVTLGHTPDVKNLVPDLGTF 267
Query: 116 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 175
+P ++++VP V+E +Y+ +++ + A ++++ K G L
Sbjct: 268 RPTFVVAVPRVFEKVYNTAKQKAHADGKGKIFDAAEATAVAYSEAQEKG---GAGLGLRA 324
Query: 176 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHID 234
K HL+ +KLVY K+++A+G A VSGG L +
Sbjct: 325 K------------------------HLVFDKLVYGKLRAALGGRCIAAVSGGAPLGARLA 360
Query: 235 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
F+ IGV V GYGLTE+S +G+VG P+ T ++I AE EVL
Sbjct: 361 HFFRGIGVPVFEGYGLTETSAAANVNTSAAFRVGTVGRPVAGTSVRI--AEDGEVL---- 414
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
++G V Y+ NP AT +AL DGW +TGD+G + G L + G
Sbjct: 415 -----LKGDVVFGRYYNNPEATAEAL-TDGWFHTGDLGELDSE----------GFLKITG 458
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
R K+ IV + G+NV P LE+ S L+ Q++V+G + A++ D+E
Sbjct: 459 RKKEIIVTAGGKNVAPSGLEDTIKASPLVSQVMVVGDQRPFIAALVTIDEE 509
>gi|325673718|ref|ZP_08153409.1| long-chain-fatty-acid--CoA ligase [Rhodococcus equi ATCC 33707]
gi|325555739|gb|EGD25410.1| long-chain-fatty-acid--CoA ligase [Rhodococcus equi ATCC 33707]
Length = 602
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 167/340 (49%), Gaps = 51/340 (15%)
Query: 69 AENGDKFLSMLPPWHVYERACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 127
A G++ L+ LP HV RA +F + G + ++ + + +R++P+ ++ VP V+
Sbjct: 221 ARPGNRMLTFLPLAHVLARAVSLAMFEAGGTQAHWSNFGTVAEQFERFRPNVILGVPRVF 280
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E ++ S+A + R +FA+ I + + + PS+L
Sbjct: 281 E--------KVRDSAAHTASKGGPIARAAFAFAESTAIE--YSESLDAGGPSFL------ 324
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQV 246
L AR H LA++LV++K+++A+G +SGGG+L + F+ G+ +
Sbjct: 325 LKAR---------HALADRLVFRKLRAAMGDECWWAISGGGALMPRLGHFFRGAGIPIFE 375
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI-VDAETNEVLPAGSKGIVKVRGSQV 305
GYGLTES+ P +G+VG P++ ++I VD E +++ G V
Sbjct: 376 GYGLTESTAAHCVNVPGEQKIGTVGRPMSGNSVRIAVDGE------------IELAGGVV 423
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
GY++N AT D DGW+ TGD+G + G L+L GR KD +V ++G
Sbjct: 424 FGGYWRNEEATADVFD-DGWMRTGDLGELDDD----------GYLILTGRKKDLLVTASG 472
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+NV P LE+ ++LI Q VV+G + GA++ D E
Sbjct: 473 KNVSPGPLEDRLRSNALISQAVVVGDGRPFIGALLTLDPE 512
>gi|383758879|ref|YP_005437864.1| AMP-dependent synthetase and ligase [Rubrivivax gelatinosus IL144]
gi|381379548|dbj|BAL96365.1| AMP-dependent synthetase and ligase [Rubrivivax gelatinosus IL144]
Length = 608
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 173/355 (48%), Gaps = 47/355 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D FLS LP H +ER GY++ + G + + + ++L +D++ +P +ISVP +YE +
Sbjct: 230 DVFLSFLPLSHTFERTAGYYLPIAAGSTVAFARSTQHLPEDMKTVRPTVLISVPRIYERV 289
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
+ +Q + S+ +R+ A ++R FC + P + A D
Sbjct: 290 FVKLQTMLEGSALKKRLFDMA------QAVGWRR----FCREQKLPVPGSVPAAWD---- 335
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
A++WPL LA + V +Q+ G + VSGG +L I + +G+ + GYG
Sbjct: 336 ----ALVWPL--LASR-VSAPLQAQFGGRLRLAVSGGAALSAPIARCFLGLGLPIVQGYG 388
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
+TES+PVI+ P N +VG P++ E++I D E+L VRG+ VM+GY
Sbjct: 389 MTESTPVISCNTPEDNDPATVGRPLDGVEVRIGD--NRELL---------VRGANVMRGY 437
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ P T +AL E GWL+TGD ++ GG + + GR K+ IV +TGE +
Sbjct: 438 WNRPEDTARAL-EGGWLHTGD-----------QASLDGGRIRIVGRVKEIIVTATGEKIA 485
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 424
P +LE A + L G ++ ++V A+ L + AD + L
Sbjct: 486 PTDLEMAIVADPLFESAWAFGDNRPFIACVVVLAAGPWERLARSLGLDPADPASL 540
>gi|150004049|ref|YP_001298793.1| long-chain-fatty-acid--CoA ligase [Bacteroides vulgatus ATCC 8482]
gi|423312811|ref|ZP_17290747.1| hypothetical protein HMPREF1058_01359 [Bacteroides vulgatus
CL09T03C04]
gi|149932473|gb|ABR39171.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides vulgatus
ATCC 8482]
gi|392687211|gb|EIY80507.1| hypothetical protein HMPREF1058_01359 [Bacteroides vulgatus
CL09T03C04]
Length = 601
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 172/369 (46%), Gaps = 48/369 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D ++ LP HV+ERA + S G L + +++ ++ +P M SVP +E
Sbjct: 221 DQDVIMNFLPFTHVFERAWTCWCLSMGCTLSINLRPADIQKTIKEIRPTAMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + I++ + + +Y+G P
Sbjct: 281 VYAGVQEKINETTGLKKKLMLDAIKVGREHN-LEYVYKGLT-------PP---------- 322
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
+L + EK +Y ++ IGI + G ++P + F ++G+ + G
Sbjct: 323 -----PVLHMKYKFYEKTIYSLLKKTIGIENGRFFPTAGAAIPPAVQEFVLSVGINMVAG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ +A +V+GSVG + H +++I E NE++ +RG +
Sbjct: 378 YGLTESTATVACENDNDHVVGSVGRIMPHVQVRI--GENNEIM---------LRGEGITH 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K +ATK A EDGW +TGD G+I H L L R KD S G+
Sbjct: 427 GYYKKEAATKAAFTEDGWFHTGDAGYIKDGH-----------LFLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + I QI +I +++ A+I+P+ + V A + I + EL ++
Sbjct: 476 IAPQAIEAKLVVDRYIDQISIIADERKFVSALIIPEYKLVKEYAAKKGIRYESMEELLQK 535
Query: 428 KTISLLYGE 436
I L+ E
Sbjct: 536 PEIIDLFKE 544
>gi|148977488|ref|ZP_01814077.1| long-chain acyl-CoA synthetase [Vibrionales bacterium SWAT-3]
gi|145963283|gb|EDK28549.1| long-chain acyl-CoA synthetase [Vibrionales bacterium SWAT-3]
Length = 602
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 178/388 (45%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSDVKPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ + + + + EG + PS +
Sbjct: 280 SAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQ--EG-------RTPSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+KLV K+++ +G + + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKKSHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + E+KI NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDRCFNPDSIGMAMPGAEVKI--GAQNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + DE G+L TGD G + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETAKTFDEHGFLKTGDAGHFDEN----------GNLFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVVEGALGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQQELAKFEQVKKFKLLP 562
>gi|448366532|ref|ZP_21554655.1| AMP-dependent synthetase and ligase [Natrialba aegyptia DSM 13077]
gi|445653987|gb|ELZ06843.1| AMP-dependent synthetase and ligase [Natrialba aegyptia DSM 13077]
Length = 680
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 67/357 (18%)
Query: 75 FLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYS 132
+S LP HV+ER G+F+ F+ G + Y + LK+D + QP SVP VYE +Y
Sbjct: 263 LVSYLPLAHVFERTAGHFLLFAAGATVAYAESSDTLKEDFRAVQPTGATSVPRVYEKIYD 322
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I+++ S R+ A T R Y A
Sbjct: 323 AIREEATESPIKERIFDWA--------TDVSRAY---------------------YRADD 353
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
IL +A+KLV+ K++ A+G + + VSGGGSL + Y +G+ + GYGLT
Sbjct: 354 PGPILEFKLSVADKLVFSKVKEALGGNVEMLVSGGGSLSEDLCTLYHGMGLPILEGYGLT 413
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKI---VDAETNEVLPAGSKGIVKVRGSQVMQG 308
E+SPV+ P +G+VG + ++ + + + + G G + VRG V +G
Sbjct: 414 ETSPVVTTNPPEAPKIGTVGPAVIDCDVTVDGSIVPDGDAASTPGETGELLVRGPNVTEG 473
Query: 309 YFKNPSATKQAL------------DEDG----------WLNTGDIGWIAPHHSRGRSRRC 346
Y+ P+AT +A D DG W TGDI + P
Sbjct: 474 YWNKPAATDRAFTADAPGEGASDADRDGNASETDADAEWFRTGDIVTVRPD--------- 524
Query: 347 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
G + R K +VLSTG+NV P +E+ + L+ Q +V+G ++ GA+IVP+
Sbjct: 525 -GYIEFHERTKQLVVLSTGKNVAPAPIEDTFAANELVEQCLVVGDGEKFVGALIVPN 580
>gi|440751544|ref|ZP_20930770.1| Long-chain-fatty-acid--CoA ligase [Mariniradius saccharolyticus
AK6]
gi|436479870|gb|ELP36157.1| Long-chain-fatty-acid--CoA ligase [Mariniradius saccharolyticus
AK6]
Length = 585
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 171/372 (45%), Gaps = 60/372 (16%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVP 124
+VP G K LS LP H+YER Y GI + Y ++ + ++L+ QPH +VP
Sbjct: 205 VVPTGEG-KALSFLPLCHIYERTGSYCFIYMGISIYYAESMETIGENLKEVQPHIFDTVP 263
Query: 125 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
+ E +Y I + + + ++ + + + Y N+ Q ++
Sbjct: 264 RLLEKVYDKIVSKGYELTGVKKSLFFWALNLGLKYEP------------NKDQSAWYNFQ 311
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL--PMHIDLFYEAIGV 242
+ LA K+++ K + A+G + ++ G S P +F+ A G+
Sbjct: 312 LK----------------LANKIIFSKWREALGGNVMQINSGASALQPRLARVFWSA-GI 354
Query: 243 KVQVGYGLTESSPVIAARRPTCN----VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
V GYGLTE+SPVI+A CN +G VG + E+KI A E+L
Sbjct: 355 PVCEGYGLTETSPVISAS--VCNHKDIRIGMVGKIVKDVEVKI--APDGEIL-------- 402
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
+G +MQGY+K P T + L+ DGW +TGDIG + GG L + R K+
Sbjct: 403 -AKGPNIMQGYYKQPDLTAEVLEPDGWFHTGDIGEL----------HEGGYLKITDRKKE 451
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
S G+ + P +E S +I QI+V+G+++ P A+IVP + + K I +
Sbjct: 452 IFKTSGGKYIAPQPMENKFKESPVIEQIIVVGENKNFPAALIVPSIQGLKDWCKHKDIPY 511
Query: 419 ADASELSKEKTI 430
+E+ K+ I
Sbjct: 512 TTDAEMLKKPEI 523
>gi|240947866|ref|ZP_04752306.1| putative long-chain-fatty-acid--CoA ligase [Actinobacillus minor
NM305]
gi|240297828|gb|EER48264.1| putative long-chain-fatty-acid--CoA ligase [Actinobacillus minor
NM305]
Length = 588
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 174/391 (44%), Gaps = 67/391 (17%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYE 128
+ D LS LP H++ERA ++ RG + Y N ++ L +P M +VP +YE
Sbjct: 216 DEKDSSLSFLPFSHIFERAWVAYMLHRGATICYLENTNEVRQALMELKPSLMCAVPRLYE 275
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+ I ++ + RR + IR + ++ +GF
Sbjct: 276 KMYTAIWDKVNQAPLHRRALFHWAIRTA------QKGRKGFAFK---------------- 313
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
LA+KLV K+++ +G + + GG L I F++AIG+ +++G
Sbjct: 314 --------------LADKLVLSKLRALLGGNIRMMPCGGAKLEPAIGAFFQAIGINIKLG 359
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG+TE++ ++ + S+G + + E++I E NE+L VRG VM+
Sbjct: 360 YGMTETTATVSCWEADGFNVKSIGKLMPNAEVRI--GENNEIL---------VRGGMVMR 408
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K P T A EDG+L TGD G G L + R K+ + S G+
Sbjct: 409 GYYKKPEETASAFTEDGFLKTGDAGEFDAE----------GNLYITDRIKELMKTSNGKY 458
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK- 426
+ P +E + I QI VI ++ A+IVP + + AK+L+I + D EL K
Sbjct: 459 IAPQYIEGTLGKDKFIEQIAVIADAKKYVSALIVPCFDSLEAYAKQLNIKYQDRLELIKH 518
Query: 427 -------EKTISLLYGELRKWTSKCSFQIGP 450
EK I L EL + F + P
Sbjct: 519 SEILQMFEKRIENLQKELAHFEQVKKFTLLP 549
>gi|145636795|ref|ZP_01792461.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittHH]
gi|145270093|gb|EDK10030.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittHH]
Length = 599
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 166/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 320 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T Q EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQTFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 532 DILKMFEQ 539
>gi|282892020|ref|ZP_06300497.1| hypothetical protein pah_c205o038 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498062|gb|EFB40404.1| hypothetical protein pah_c205o038 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 582
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 173/367 (47%), Gaps = 59/367 (16%)
Query: 54 KMTNFQIRSLYDIVPAE---NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLK 109
++T + SL I P D++LS+LP H++ RA + + GI + Y A V+ L
Sbjct: 189 ELTQTSLVSLLHIDPFHWNPKTDRYLSVLPLAHIFARALNLIMVAWGISVYYLADVKKLG 248
Query: 110 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 169
+ Q+ +P MI VP + E + + + ++ + R++ R +R++
Sbjct: 249 EAAQQVKPSLMILVPRILEKIQANMWAKVNAGNFMTRLIGRWALRLA------------- 295
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
QK+ S+ W +I H +A+ LVY +++ A G + +SGG
Sbjct: 296 ----AQKESSF--------WRQI-------FHPIADTLVYSRLREAFGNRLRLIISGGAH 336
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
L + F+ AIG V GYGLTE++ V R V G++G P + T
Sbjct: 337 LNPDVYHFFLAIGFPVYEGYGLTEAATVSCNRFNRIKV-GTIGLPF--------EGMTVS 387
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+ P G + V+G VM+GY+K+P AT+ A EDGWL TGD R + G
Sbjct: 388 LTPEGE---LLVKGGLVMKGYYKSPEATQNAFTEDGWLRTGD---------RAQIDEEGF 435
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 408
+ +L GR K+ + GE + P+ +E+A + L+ ++I ++ +I PD E V
Sbjct: 436 ITIL-GRLKELFKTTKGEYISPVPIEQALAKDRLVDMAIIIADSRKYATCLIFPDFEAVK 494
Query: 409 MAAKRLS 415
K+L+
Sbjct: 495 KIQKKLN 501
>gi|440229441|ref|YP_007343234.1| AMP-forming long-chain acyl-CoA synthetase [Serratia marcescens
FGI94]
gi|440051146|gb|AGB81049.1| AMP-forming long-chain acyl-CoA synthetase [Serratia marcescens
FGI94]
Length = 599
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 183/411 (44%), Gaps = 55/411 (13%)
Query: 38 LFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T P M ++ Q+ D + D LS LP HV+ERA +F
Sbjct: 183 LFTLIYTSGTTGEPKGVMLDYRNMAAQLCQHDDRLTVGEEDVSLSFLPLSHVFERAWSFF 242
Query: 93 IFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 151
I G + ++ + +++ + +P M +VP YE ++S + +++ + RR++ R
Sbjct: 243 IMHSGAQNVFLPNTDWVREAMTAVRPTVMCAVPRFYEKIFSAVHEKVARAPWWRRLLFRW 302
Query: 152 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL-HLLAEKLVYK 210
I C R Q A C L L H A+KLV
Sbjct: 303 AIG---------------CGERKFLQER----------AGTPCGRLSALTHRWADKLVLS 337
Query: 211 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 269
K++ +G + + G L ++ LF++A+GV ++ GYG+TE+ ++ GS
Sbjct: 338 KLRGLLGGRVRFLPAAGAKLDDNVILFFQALGVNIKYGYGMTETCATVSCWEEHDFRFGS 397
Query: 270 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 329
+G P+ E++I AE NE ++VRG VM+GYF P T Q DGWL TG
Sbjct: 398 IGKPLPDVEVRI--AEENE---------IQVRGPVVMRGYFNKPLETAQTFTADGWLKTG 446
Query: 330 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 389
D G + G L + R KD + S G+ + P LE + I Q+ VI
Sbjct: 447 DAGAVDEQ----------GNLFITERLKDLMKTSGGKYIAPQMLEGTLAQDRFIEQVAVI 496
Query: 390 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRK 439
++ A+IVP E + AK L++ + D EL + + I + LR+
Sbjct: 497 ADARKFVSALIVPCFESLEEYAKSLNLKYHDRLELLRHSQIIEMFEARLRE 547
>gi|379729826|ref|YP_005322022.1| putative long chain fatty-acid CoA ligase [Saprospira grandis str.
Lewin]
gi|378575437|gb|AFC24438.1| putative long chain fatty-acid CoA ligase [Saprospira grandis str.
Lewin]
Length = 607
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 185/403 (45%), Gaps = 45/403 (11%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQP 117
+R + +P + D LS LP HV+ER Y ++G ++ Y + L + LQ +P
Sbjct: 208 NVRDVLPFIPLQPQDIALSFLPLCHVFERTVTYSYMAKGAQIFYAKDLDTLSETLQDVRP 267
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
H+ +VP + E +Y + ++ + + + ++ Y
Sbjct: 268 HFFTTVPRLLEKVYEKMMLKVQAEGGLKEKIFNWALGLTEKYD----------------- 310
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLF 236
DW A + AI W + A+KLV+ K++ +G G V+G + P +
Sbjct: 311 -------FDWQ-AAGLEAIKWKI---ADKLVFSKVRDRLGGRLKGIVTGAAACPPRMTQL 359
Query: 237 YEAIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
+ A+GV ++ GYGLTE+SP I+ P ++GSVG + ++KI ++
Sbjct: 360 FSAVGVPIREGYGLTETSPAISINIFEPYQAMIGSVGPILPSVQVKIDQDDSY----GPG 415
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+G V V+G+ VM GY++ T + +E+GW TGDIG I +++ L +
Sbjct: 416 EGEVLVKGNSVMMGYYRKEDKTAEVFNEEGWFLTGDIGKIV------ENKKGIKFLKITD 469
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R K+ + S G+ V P +E L+ Q++V+G+ ++ A+I P+ E + +
Sbjct: 470 RKKELLKTSGGKYVAPTPIESTLKEDLLVEQVMVVGEKRKFVSALIQPNFESLKNWCQDK 529
Query: 415 SIVHADASE-LSKEKTISLLYGELRKWTSKCS--FQIGPIHVV 454
+I E L+ K ++ + ++ + S QI H+V
Sbjct: 530 NITWTKPEEVLANPKVLAYFQAVVNRYNPRFSKVEQIKKFHLV 572
>gi|453382102|dbj|GAC83309.1| long-chain fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 595
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 159/340 (46%), Gaps = 52/340 (15%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYE 128
+ G + L LP HV R + L +T + NL D ++PHY++SVP V+E
Sbjct: 220 QEGKQTLLFLPLAHVLARIIAVAAIENRVILGHTNDIANLVDLFATFKPHYVLSVPRVFE 279
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+ +A ++ Y+G + +K + +
Sbjct: 280 KVYN---------------------------SAKQKAYDGGKGSIFEKATETAIEYSKAM 312
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVG 247
A I L H L +KLVY K+++A+G G +SGG L + F+ +G+ V G
Sbjct: 313 EAGKIGLGLKLRHALFDKLVYGKLRAALGGQCEGAISGGAPLGARLGHFFRGVGIPVYEG 372
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTE++ + A +GSVG P+ ++I AE E+L V+G V
Sbjct: 373 YGLTETTAAVTANNEKHQKVGSVGRPVPGVTVRI--AEDGEIL---------VKGPMVFS 421
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY++N AT A+ DGW +TGD+G + G L + GR K+ IV + G+N
Sbjct: 422 GYWQNEQATADAI-RDGWFHTGDVGTLDD-----------GYLFITGRKKELIVTAGGKN 469
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
V P +LE++ L+ Q +V+G ++ GA+I D E +
Sbjct: 470 VAPAQLEDSIRAHPLVSQCLVVGDNKPFIGALITLDAEAI 509
>gi|409198272|ref|ZP_11226935.1| long-chain-fatty-acid-CoA ligase [Marinilabilia salmonicolor JCM
21150]
Length = 636
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 165/328 (50%), Gaps = 45/328 (13%)
Query: 104 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 163
++N +++ QPH ++SVP + + I+K I A++ V L + Y+ +
Sbjct: 257 TLKNFSNNIMEIQPHVLMSVPAMAKNFRKNIEKGI----ASKGKVVSGLFNFAMNYSIW- 311
Query: 164 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV 223
Y G + N K + + I PL+ L ++++++ I+ G +
Sbjct: 312 --YNG---SGNDK-------------GKGLKKITAPLYKLFDRILFQTIRVRFGGNLQFF 353
Query: 224 SGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 281
GGG+L + IDL F+ A+G + GYGL+E++P+I+A P + LGS G + + E+KI
Sbjct: 354 IGGGAL-LDIDLQRFFYALGTPMYQGYGLSEAAPIISANTPDHHKLGSSGPIVQNLEVKI 412
Query: 282 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 341
D++ N LPAG+ G + V+G VM GY+KN AT + + DGWL TGD+G++
Sbjct: 413 CDSDGN-TLPAGTSGEIVVKGENVMLGYWKNQEATNETII-DGWLFTGDLGYLDNQ---- 466
Query: 342 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAII 400
G L + GR K ++ S GE P +EEA + L+ Q V+ +I
Sbjct: 467 ------GYLYVLGRFKSLLIGSDGEKYSPEGIEEAIIDHCPLVDQFVLHNNQNPYTIGLI 520
Query: 401 VPDKEEVLMAAKRLSIVHADASELSKEK 428
VP E+V +K L E+S+E+
Sbjct: 521 VPSSEKVNQLSKEL------GDEMSQEE 542
>gi|257388283|ref|YP_003178056.1| AMP-dependent synthetase and ligase [Halomicrobium mukohataei DSM
12286]
gi|257170590|gb|ACV48349.1| AMP-dependent synthetase and ligase [Halomicrobium mukohataei DSM
12286]
Length = 660
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 168/364 (46%), Gaps = 60/364 (16%)
Query: 72 GDKFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
G +S LP HV+ER G+F+ F+ G + Y + L DD++ +P SVP VYE
Sbjct: 266 GTTSISFLPLAHVFERLAGHFVMFAAGATVGYVEDPDTLADDIKLIRPDTGASVPRVYER 325
Query: 130 LYSGIQKQIFTSSAARRV------VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
++ ++ Q S R+ VAR R P L+
Sbjct: 326 IFDRMRDQASESPIKERIFEWSTDVAREWARTD--------------------DPGPLLG 365
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
L H ++++LVY +++ +G + + VSGGGSL + + + +
Sbjct: 366 L---------------KHAVSDRLVYSQLKENLGGNIEFMVSGGGSLSKELCETFLGMDL 410
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK----IVDAETNEVLPAGSKGIV 298
+ GYGLTE++PV++ P G++G P+ E+K +VD + E + G +
Sbjct: 411 TIVEGYGLTETAPVVSVNPPEDVRPGTMGVPVVDEEVKLDTHVVDQDDFET--SRDVGEL 468
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
VRG V GY+ T Q+ + DGW +TGDI R L+ R K+
Sbjct: 469 LVRGPNVADGYWNREKETAQSFEPDGWFHTGDI----------VERTEDDFLIYHDRLKE 518
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 418
IVLSTG+NV P +E+A S + Q +V+G DQ+ A+ VP+ E++ A R I
Sbjct: 519 VIVLSTGKNVAPQPIEDAFSTSDRVAQAMVVGDDQKFIAAMFVPNFEQLRRWADREGIDL 578
Query: 419 ADAS 422
D+
Sbjct: 579 PDSE 582
>gi|241767571|ref|ZP_04765237.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
gi|241361563|gb|EER57960.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
Length = 427
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 190/404 (47%), Gaps = 44/404 (10%)
Query: 63 LYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYM 120
L IVP + D FLS LP H +ER GY++ + G + Y +V L +DL+ +P +
Sbjct: 30 LERIVPTAD-DVFLSFLPLSHTFERTGGYYLPMAAGSCVAYARSVPLLAEDLKAVRPTVL 88
Query: 121 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 180
+SVP +YE +++ + +++ + ++ A + + FC ++ P+
Sbjct: 89 VSVPRIYERIHAKLLEKLSPTP----------WKMQLYEAAQNKGWARFCASQGLPAPTP 138
Query: 181 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 239
+ W + A+ WP + + LV K + + G + VSGG L I +
Sbjct: 139 DASSQAAGW---MAALPWP---VLQALVAKPLLAQFGGRVRVAVSGGAPLSPTIAKCFLG 192
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
+G+ + GYG+TE++PV++ N VG ++ E++I D ++
Sbjct: 193 LGLPLIQGYGMTETAPVVSVNALGDNDPACVGKALSGVEVRIGDNRE-----------LQ 241
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
VRG VM+GY+K P T + LD +GWL TGD ++ G + ++GR K+
Sbjct: 242 VRGPIVMKGYWKRPEDTARILDPEGWLGTGD-----------QAEIVNGRIYIKGRIKEI 290
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 419
IV STGE + P +LE A L L+ Q V+G+++ + V + E + A L +
Sbjct: 291 IVTSTGEKIPPGDLELALLADPLLEQAFVVGENRPFIACVAVVKRGEWVRLAADLGLNPQ 350
Query: 420 DASELSKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 461
A L+ + + K T+ + P +H+ EP+T+
Sbjct: 351 AADSLNHPSVHRAVLARIEKNTASFARYAVPRAVHLTLEPWTIE 394
>gi|433640013|ref|YP_007285773.1| AMP-forming long-chain acyl-CoA synthetase [Halovivax ruber XH-70]
gi|433291817|gb|AGB17640.1| AMP-forming long-chain acyl-CoA synthetase [Halovivax ruber XH-70]
Length = 664
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 177/385 (45%), Gaps = 64/385 (16%)
Query: 65 DIVPA-ENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMI 121
D VP+ + + +S LP HV+ER G+F+ F G + Y + L+DD +P
Sbjct: 250 DDVPSIDEHTRVVSYLPLAHVFERTSGHFLMFGSGASVAYAESPDTLQDDFAAVEPTSAT 309
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
SVP VYE +Y I++Q S+ ++ A + + Y + P
Sbjct: 310 SVPRVYEKIYDAIREQASESAIKEKIFEWA-VDVGVEY-------------QETDSPG-- 353
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
IL LA+KLV+ ++ A+G + + +SGGGSL + Y A+
Sbjct: 354 -------------PILDVKRKLADKLVFSTVRDALGGNIEMLISGGGSLSAELCSLYHAM 400
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI----NHTEIKIVDAETNEVLPAGSKG 296
G+ + GYGLTE++PV++ P +G++G P+ + IVD + P G G
Sbjct: 401 GLPIYEGYGLTETAPVVSVNPPGFPKVGTIGPPVVDIQTTVDESIVDDDAFASDP-GEVG 459
Query: 297 IVKVRGSQVMQGYFKNPSATKQA-LDE---------------DGWLNTGDIGWIAPHHSR 340
+ VRG V +GY+ P AT+++ +DE W TGDI
Sbjct: 460 ELVVRGPNVSEGYWNKPGATERSYIDEAPGEVHGELETPERAGQWFRTGDI--------- 510
Query: 341 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 400
RR G + RAK +VLSTG+NV P +E+ SS++ Q +V+G ++ A++
Sbjct: 511 -VHRRPDGYIEFRERAKQILVLSTGKNVAPGPIEDRFAASSVVEQCMVVGDGRKFVSALV 569
Query: 401 VPDKEEVLMAAKRLSIVHADASELS 425
VP+ E V A I D E +
Sbjct: 570 VPNMEHVREWAAEEGIDLPDDPEAA 594
>gi|338174756|ref|YP_004651566.1| long-chain-fatty-acid--CoA ligase [Parachlamydia acanthamoebae
UV-7]
gi|336479114|emb|CCB85712.1| putative long-chain-fatty-acid--CoA ligase [Parachlamydia
acanthamoebae UV-7]
Length = 582
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 173/367 (47%), Gaps = 59/367 (16%)
Query: 54 KMTNFQIRSLYDIVP---AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLK 109
++T + SL I P D++LS+LP H++ RA + + GI + Y A V+ L
Sbjct: 189 ELTQTSLVSLLHIDPFYWNPKTDRYLSVLPLAHIFARALNLIMVAWGISVYYLADVKKLG 248
Query: 110 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 169
+ Q+ +P MI VP + E + + + ++ + R++ R +R++
Sbjct: 249 EAAQQVKPSLMILVPRILEKIQANMWAKVNAGNFMTRLIGRWALRLA------------- 295
Query: 170 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 228
QK+ S+ W +I H +A+ LVY +++ A G + +SGG
Sbjct: 296 ----AQKESSF--------WRQI-------FHPIADTLVYSRLREAFGNRLRLIISGGAH 336
Query: 229 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 288
L + F+ AIG V GYGLTE++ V R V G++G P + T
Sbjct: 337 LNPDVYHFFLAIGFPVYEGYGLTEAATVSCNRFNRIKV-GTIGLPF--------EGMTVS 387
Query: 289 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 348
+ P G + V+G VM+GY+K+P AT+ A EDGWL TGD R + G
Sbjct: 388 LTPEGE---LLVKGGLVMKGYYKSPEATQNAFTEDGWLRTGD---------RAQIDEEGF 435
Query: 349 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 408
+ +L GR K+ + GE + P+ +E+A + L+ ++I ++ +I PD E V
Sbjct: 436 ITIL-GRLKELFKTTKGEYISPVPIEQALAKDRLVDMAIIIADSRKYATCLIFPDFEAVK 494
Query: 409 MAAKRLS 415
K+L+
Sbjct: 495 KIQKKLN 501
>gi|399025084|ref|ZP_10727101.1| AMP-forming long-chain acyl-CoA synthetase [Chryseobacterium sp.
CF314]
gi|398079003|gb|EJL69880.1| AMP-forming long-chain acyl-CoA synthetase [Chryseobacterium sp.
CF314]
Length = 592
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 177/388 (45%), Gaps = 63/388 (16%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
+ LS LP H++ER Y G + + ++ + ++++ +PHYM VP + E +Y
Sbjct: 220 RVLSFLPICHIFERMLFYLFQYNGFSIYFAESIDKMGENVKEVKPHYMSVVPRLVEKVYD 279
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I T S+A + ++ + L + +K+ S + +
Sbjct: 280 KIYN---TGSSAGGLKSKIF-------------FWALNLIQKKKEVSKPSGIQE------ 317
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
++A+KLV+KK + +G VSG +L ++L ++ G+ + GYGLT
Sbjct: 318 ---------IIADKLVFKKWREGLGGEIITLVSGSAALSTRLNLMFQNAGIPILEGYGLT 368
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E+SPVI+ +G+VG P+++ ++KI + G + V+G V +GYFK
Sbjct: 369 ETSPVISVNSFEKMKIGTVGLPLDNLKVKIQE-----------DGEITVKGPSVFKGYFK 417
Query: 312 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 371
N +K+A EDG+ TGDIG I G L + R K+ S G+ + P
Sbjct: 418 NEETSKEAFTEDGYFKTGDIGHI----------DSDGFLQITDRKKEMFKTSGGKYIAPQ 467
Query: 372 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK---- 426
+E A S I QI+V+G ++ P A+I PD E A R ++ + + E++K
Sbjct: 468 TIENLAKASKFIEQIMVVGDGEKMPCALIQPDFEFAKSWAMRNNLSIGSTPQEIAKSPEL 527
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK I + L W ++ P
Sbjct: 528 KERIEKEIEGINEHLGNWEKIKKIELTP 555
>gi|338533716|ref|YP_004667050.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
gi|337259812|gb|AEI65972.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
Length = 604
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 174/381 (45%), Gaps = 42/381 (11%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACG-YFIFSRGIEL-MYTAVRNLKDDLQRYQ 116
+ +++++ P D+ L+ LP HV+ + + +FS G + + AV + D+L +
Sbjct: 197 NVSAMHEVFPMGTDDRSLAFLPWAHVFGQTVELHALFSMGASMAIAEAVEKIIDNLSEVK 256
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P + SVP ++ +Y G+QK++ A + V R + R A A KR Q
Sbjct: 257 PTLLFSVPRIFNRIYDGLQKRM----AGEKPVTRFMFRRGLAVAAEKRALA------EQG 306
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ S L+ L H +K+V+ K+++ G K SGG ++ +
Sbjct: 307 KSSGLLDL---------------QHAFFDKVVFSKVRARFGGRLKYAFSGGSAISKEVAE 351
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
F + +G+ V GYGLTE+SP+ A P +GSVG + I+I A T E +
Sbjct: 352 FIDNLGITVYEGYGLTETSPIATANFPENRKIGSVGKALPGVRIEIDTAATGEA----KQ 407
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
G + V G VM GY+ P ++ +G TGD+G++ P G L + GR
Sbjct: 408 GEIVVHGHNVMMGYYNKPEENEKVFTGNGGFRTGDMGYLDPD----------GYLYITGR 457
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K+ L G+ V P +E++ S+ I +V G ++ AIIV D + + A
Sbjct: 458 IKEQYKLENGKYVVPSPIEQSLALSTYIANALVHGMNKPYNVAIIVVDVDALKKWATEKG 517
Query: 416 IVHADASELSKEKTISLLYGE 436
+ + EL K + LY E
Sbjct: 518 LDTSSMPELLKRPEVLQLYRE 538
>gi|303256261|ref|ZP_07342277.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
gi|330998956|ref|ZP_08322681.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
gi|302860990|gb|EFL84065.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
gi|329575698|gb|EGG57224.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
Length = 616
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 158/336 (47%), Gaps = 44/336 (13%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
+RS V E GD FLS LP H++ER GY++ + G +++ +++ L +D + +
Sbjct: 215 NVRSTLAHVKPEIGDIFLSFLPLSHMFERTAGYYLALATGSTIVFNRSLQYLAEDFKIAK 274
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P+ +ISVP VYE +Y+ + + + I+ + + A ++ FC + K
Sbjct: 275 PNVLISVPRVYERIYAKLNDAL---------AKKGKIQAALFHMAVNAGWQNFCKKNSIK 325
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
+ L ++ K + +K++S G + +SGG SL
Sbjct: 326 TAGSQGLMFGGL-----------VNATVGKKISEKLKSQFGGRLRVAISGGASLNPEAAK 374
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
+ +G+ V GYG+TE+SP+I+ T N +VG + I++ G +
Sbjct: 375 VFCGLGLPVIQGYGMTETSPIISGNNVTDNDPATVGRALKDVSIRL-----------GER 423
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
++++G VM+GY+ TK A EDGWL TGD G + GR L + GR
Sbjct: 424 EEIQIKGDLVMKGYWDREKDTKNAFTEDGWLKTGDQG---AYDGEGR-------LKIVGR 473
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 391
K+ IV STGE + P+++E A L RQ +G
Sbjct: 474 IKEIIVTSTGEKISPVDIESALETIPLFRQTYAVGD 509
>gi|312881741|ref|ZP_07741518.1| long-chain acyl-CoA synthetase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370631|gb|EFP98106.1| long-chain acyl-CoA synthetase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 600
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 175/388 (45%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y +K L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWSFYVLYKGATNCYLQDTSAIKQALVEVRPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ F + C + K PS L
Sbjct: 280 SAIHEKVAKAPLVRKII--------FTWAVNMGAKLAHC-QQTGKTPSLL---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L H LA+ +V K++S +G + + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKKSHQLADSMVLSKLRSLVGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE+ I+ C S+G P+ E+KI NE+L VRG VM+GY+
Sbjct: 376 TETVATISCWDDGCFNPDSIGLPMPGAEVKI--GPNNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T++ D++G+L TGD G+I G + + R K+ + S G+ + P
Sbjct: 425 KLAEETQKTFDDEGFLKTGDAGYIDDK----------GNVFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDALEDYAKDLNIKYHDKVELIKNNQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK + L EL K+ F++ P
Sbjct: 535 IEMLEKRVENLQKELAKFEQIKRFKLLP 562
>gi|419839901|ref|ZP_14363302.1| AMP-binding enzyme [Haemophilus haemolyticus HK386]
gi|386909003|gb|EIJ73687.1| AMP-binding enzyme [Haemophilus haemolyticus HK386]
Length = 602
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 166/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKTVPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 320 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VR VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRSGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 532 EILKMFEQ 539
>gi|448375998|ref|ZP_21559282.1| Long-chain-fatty-acid--CoA ligase [Halovivax asiaticus JCM 14624]
gi|445658016|gb|ELZ10839.1| Long-chain-fatty-acid--CoA ligase [Halovivax asiaticus JCM 14624]
Length = 664
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 172/374 (45%), Gaps = 61/374 (16%)
Query: 74 KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
+ +S LP HV+ER G+F+ F G + Y + L+DD +P SVP VYE +Y
Sbjct: 260 RVVSYLPLAHVFERTSGHFLMFGSGASVAYAESPDTLQDDFAAVEPTSATSVPRVYEKIY 319
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
I++Q S+ ++ A + + Y + P
Sbjct: 320 DAIREQASESAIKEKIFEWA-VDVGVEY-------------QETDSPG------------ 353
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
IL LA+KLV+ ++ A+G + + +SGGGSL + Y A+G+ + GYGL
Sbjct: 354 ---PILDVKRKLADKLVFSTVRDALGGNIEMLISGGGSLSAELCALYHAMGLPIYEGYGL 410
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK---VRGSQVMQ 307
TE++PVI+ P +G++G P+ + I ++ ++ A G V VRG V +
Sbjct: 411 TETAPVISVNPPGFPKVGTIGPPVVDIQTAIDESVVDDDAFASDPGEVGELVVRGPNVSE 470
Query: 308 GYFKNPSATKQA-LDE---------------DGWLNTGDIGWIAPHHSRGRSRRCGGVLV 351
GY+ P AT+++ +DE W TGDI RR G +
Sbjct: 471 GYWNKPGATERSYIDEAPGEVHGELETPERARQWFRTGDI----------VHRRPDGYIE 520
Query: 352 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 411
RAK +VLSTG+NV P +E+ SS++ Q +V+G ++ A++VP+ E V A
Sbjct: 521 FRERAKQILVLSTGKNVAPGPIEDRFAASSVVEQCMVVGDGRKFVSALVVPNMEHVREWA 580
Query: 412 KRLSIVHADASELS 425
I D E +
Sbjct: 581 TEEGIDLPDDPEAA 594
>gi|265757046|ref|ZP_06090908.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263233545|gb|EEZ19174.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 601
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 48/369 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D ++ LP HV+ERA + S G L + +++ ++ +P M SVP +E
Sbjct: 221 DQDVIMNFLPFTHVFERAWTCWCLSMGCTLSINLRPADIQKTIKEIRPTAMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I ++ ++ + I++ + +Y+G P
Sbjct: 281 VYAGVQEKINETTGLKKKLMLDAIKVGREHN-LDYVYKGLT-------PP---------- 322
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
+L + EK +Y ++ IGI + G ++P + F ++G+ + G
Sbjct: 323 -----PVLHMKYKFYEKTIYSLLKKTIGIENGRFFPTAGAAIPPAVQEFVLSVGINMVAG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ +A +V+GSVG + H +++I E NE++ +RG +
Sbjct: 378 YGLTESTATVACENDNDHVVGSVGRIMPHVQVRI--GENNEIM---------LRGEGITH 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K +ATK A EDGW +TGD G+I H L L R KD S G+
Sbjct: 427 GYYKKEAATKAAFTEDGWFHTGDAGYIKDGH-----------LFLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + I QI +I +++ A+I+P+ + V A + I + EL ++
Sbjct: 476 IAPQAIEAKLVVDRYIDQISIIADERKFVSALIIPEYKLVKEYAAKKGIRYESMEELLQK 535
Query: 428 KTISLLYGE 436
I L+ E
Sbjct: 536 PEIIDLFKE 544
>gi|82702546|ref|YP_412112.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
gi|82410611|gb|ABB74720.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
Length = 645
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 176/360 (48%), Gaps = 49/360 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D +LS+LP H+ ER Y++ G + Y ++++L +DL+ +P ++VP VY
Sbjct: 268 DVYLSLLPLSHMLERTASYYVPLMAGSSVAYARSLKDLPEDLKSVRPGIFVAVPQVY--- 324
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
GI+ ++ R VAR L+ + A +KR F + + Q + LW
Sbjct: 325 -VGIRNKMNQQVQERGWVARLLLDWTVAL-GWKR----FTVVQAQGKER--------LWQ 370
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
R+ WP+ +LV K+ +A G + VSGGG L + ++ +G+ + GYG
Sbjct: 371 RVA----WPI---LRQLVAAKVLAAFGGRLRLAVSGGGPLHADVSRYFIGLGLPLLQGYG 423
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+SP++ A R N+ GS G + E++I E E+L R VM GY
Sbjct: 424 LTEASPILTANRLQDNMPGSTGSALLGVELRI--GEQRELL---------ARSPGVMLGY 472
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ P T+ A+D +GWL+TGD I+ +H + + GR K+ +V S+GE V
Sbjct: 473 WNRPEETRAAIDAEGWLHTGDQARISDNH-----------VFISGRIKEILVTSSGEKVP 521
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 429
+LE + ++ L Q++V+G+ + A+ V +K E A L + + LS T
Sbjct: 522 SGDLEMSIVQEPLFDQVMVVGEGRPYLTALAVVNKREWRNLASSLGLKTDEVQSLSHSAT 581
>gi|427428169|ref|ZP_18918211.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
gi|425882870|gb|EKV31549.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
Length = 670
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 163/340 (47%), Gaps = 58/340 (17%)
Query: 72 GDK-FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 128
GD+ FLS LP H YE + G +F S G ++ Y + L ++ Q +P +VP ++E
Sbjct: 227 GDEVFLSFLPLSHSYEHSAGQFFPISIGAQIYYAEGLDKLSENFQEVRPTITTAVPRLFE 286
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+ + I + + + ++ Y A + + +K + A+ +W+
Sbjct: 287 FMRNRILRAMEKQTG---------TKVKLFYKAIE-----LGAKKYEKGLGPMEAMTNWV 332
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
R LV +K+ G KA VSGG L I LF+ A+ V + G
Sbjct: 333 LGR---------------LVRRKVAQRFGGRLKALVSGGAPLNYDIGLFFMALDVPILQG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YG TE++PVI+ +RP L SVG P+ E++I AE E+L RG VM+
Sbjct: 378 YGQTEAAPVISVQRPGSVRLESVGPPLKGVEVQI--AEDGEIL---------ARGPMVMR 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K P T++A+D +GWL+TGD+G H G +V+ R KD IV S G+N
Sbjct: 427 GYWKGPEQTRKAIDAEGWLHTGDVG----HFDD------AGNIVITDRKKDIIVNSGGDN 476
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPG--AIIVPDKE 405
+ P +E I Q +V G RRP A++VPD +
Sbjct: 477 IAPARVEGFLTLEPEIAQAMVYG--DRRPHLVALLVPDPD 514
>gi|402831663|ref|ZP_10880340.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
gi|402281050|gb|EJU29742.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
Length = 592
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 173/373 (46%), Gaps = 58/373 (15%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQP 117
I++ + VP + GD LS LP H++ER Y GI L + + + ++ +P
Sbjct: 201 NIKNCHSRVPIKAGDTCLSFLPVCHIFERMLTYLYQYNGIRLYFAESFEKVATNIAEVKP 260
Query: 118 HYMISVPLVYETLYSGI-QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
+ VP V E ++ I K I S A+ + AL R+ + Y + + G+ K
Sbjct: 261 RLITVVPRVVEKVFDSIYSKGIALSGIAKSLFFWAL-RLGYRYEPYGK--NGWWYDMKLK 317
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLF 236
+A KL++ K + A+G + G +L +
Sbjct: 318 --------------------------VARKLIFSKWKKALGGHLQMICGSAALQPRLVRV 351
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNV--LGSVGHPINHTEIKIVDAETNEVLPAGS 294
+ A G+ + GYGLTE+SPVI+ ++ +G++G PI++ E+KI AE E+L
Sbjct: 352 FSAAGIPIWEGYGLTETSPVISVNCKKGHLWKVGTIGKPIDNIEVKI--AEDGEIL---- 405
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+G+ VM GY+KN T +A+D+DG+ +TGDIG + G L +
Sbjct: 406 -----CKGANVMLGYYKNEEQTHEAIDKDGFFHTGDIGILDEE----------GFLTITD 450
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R K+ S G+ + P +E +S I Q +V+G+ ++ P A++ P+ V KR
Sbjct: 451 RKKEMFKTSGGKYIAPQYIENKLKQSRFIEQAMVVGEGEKMPAALVQPNFVFVREWLKR- 509
Query: 415 SIVHADASELSKE 427
H +AS LS E
Sbjct: 510 ---HGEASTLSNE 519
>gi|298346759|ref|YP_003719446.1| putative long-subunit-fatty-acid--CoA ligase [Mobiluncus curtisii
ATCC 43063]
gi|315656782|ref|ZP_07909669.1| long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236820|gb|ADI67952.1| possible long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii
ATCC 43063]
gi|315492737|gb|EFU82341.1| long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 612
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 180/401 (44%), Gaps = 66/401 (16%)
Query: 74 KFLSMLPPWHVYERACGYFIFS-RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
+ L LP HV+ R Y + S RG+ V+N+ +DLQ ++P MI VP V E +Y+
Sbjct: 236 RLLLFLPLAHVFARFSSYTVLSGRGVLGCVPNVKNMLNDLQSFRPTSMIVVPRVLEKIYT 295
Query: 133 --------GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
G++ IF +AA+ I S A R + GF L R++
Sbjct: 296 AAQVKAGRGLKHSIFNWAAAQ------AIHYSEALNDPNRKFVGFRLHRSRA-------- 341
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
+A+KL++ K+ +G + +SGG L + F+ +G+
Sbjct: 342 ------------------IADKLLFSKLLDLMGGECRWVISGGAPLGARLGHFFRGVGLT 383
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
V G+GLTE++ P +G+VG P+ E+KI + G + VR
Sbjct: 384 VIEGWGLTETAGPATGNLPGNIRIGTVGRPLPGVELKI-----------DASGEIFVRSR 432
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM+GY NP AT + LD DGW +GD+G I G L + GR K+ IV +
Sbjct: 433 IVMRGYRNNPEATGEVLDSDGWFASGDLGEIDDD----------GYLSITGRKKELIVTA 482
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADA 421
+G+NV P LE++ L+ +VVIG + A++ D+E +A +L +
Sbjct: 483 SGKNVSPAPLEDSFRGHPLVSNVVVIGDKRPFVSALVTLDREMLPTWLANHKLPPMDPAT 542
Query: 422 SELSKEKTISLLYGELRKWTSKCSFQ-IGPIHVVDEPFTVN 461
+ + SL+ G R S + I + V+ FTV+
Sbjct: 543 AAIHPAVQESLMRGAQRASASVSRAESIRKVRVIIGDFTVD 583
>gi|15790916|ref|NP_280740.1| Lfl2 [Halobacterium sp. NRC-1]
gi|169236661|ref|YP_001689861.1| acyl-CoA synthetase [Halobacterium salinarum R1]
gi|10581487|gb|AAG20220.1| long-chain fatty-acid-CoA ligase [Halobacterium sp. NRC-1]
gi|167727727|emb|CAP14515.1| acyl-CoA synthetase [Halobacterium salinarum R1]
Length = 650
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 164/351 (46%), Gaps = 49/351 (13%)
Query: 67 VPAENGD-KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISV 123
PA D + LS LP HV ER G+F+ + G ++ Y + L++D ++P SV
Sbjct: 247 APAVTSDSRHLSFLPLAHVLERLSGHFLPLASGAQVCYAESPDTLREDFGLFEPTSATSV 306
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P VYE LY I++Q S + RV A A+T P
Sbjct: 307 PRVYEKLYDTIREQAADSPVSERVFEWATRVGRAAHTT--------------DDPGIG-- 350
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 242
L H LA+ LV+ I+ A+G + +SGGGSL + + +G+
Sbjct: 351 -------------LRAAHALADTLVFSDIRDALGGEIEFFISGGGSLSPELCALFHGMGL 397
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI---VDAETNEVLPAGSKGIVK 299
+ GYGLTE+SPV+A ++G++G P+ TE+ + + + G+ G +
Sbjct: 398 PILEGYGLTETSPVLAVNPYEDPIVGTIGPPVTDTELTVDETIASPEQRQRCDGAAGELL 457
Query: 300 VRGSQVMQGYFKNPSATKQAL---DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
RG QV GY+ P AT A + W TGD+ + P G V LE RA
Sbjct: 458 ARGPQVFDGYWGLPDATDAAFVTREGKEWFRTGDVVELRPD---------GYVRFLE-RA 507
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
K + LSTG+NV P +E+A S L+ Q +V+G Q+ AI+VP+ + V
Sbjct: 508 KQLLTLSTGKNVAPGPIEDAFAASPLVAQAMVVGDGQKFVSAILVPNFDAV 558
>gi|229821075|ref|YP_002882601.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
gi|229566988|gb|ACQ80839.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
Length = 608
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 153/334 (45%), Gaps = 50/334 (14%)
Query: 74 KFLSMLPPWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
+ L +P HV+ R + S G+ R L DL + P ++++VP V+E +Y+
Sbjct: 222 RTLLFMPLAHVFARFIEVLCVTSAGVLGHSPGTRTLTQDLASFSPTFLLAVPRVFEKVYN 281
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
+++ T R A + I+++ + +PS
Sbjct: 282 SAEQKAGTGVRLRLFRWSAKVAITYSRAG------------DSARPS------------- 316
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
+L H LA +LV+ K+++A+G + + VSGG L + F+ IGV V GYGLT
Sbjct: 317 --PVLRAQHALAGRLVHGKLRAAMGGALEYAVSGGAPLGQRLGHFFRGIGVTVLEGYGLT 374
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
ES+ A RP +G+VG TEI I D G + VRG V +GY
Sbjct: 375 ESTAPTAVNRPERIKIGTVGPAFPGTEIAIAD-----------DGEILVRGGHVFRGYRG 423
Query: 312 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 371
P AT +A DGW +TGD+G + G L + GR K+ I+ + G+NV P
Sbjct: 424 APDATAEAFTPDGWFHTGDLGTL----------DADGYLSITGRRKEIIITAGGKNVAPA 473
Query: 372 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
LE+ L+ Q+VV+G + GA++ D +
Sbjct: 474 ALEDRLRGHPLVSQVVVVGDQRPFIGALVTIDAD 507
>gi|111022997|ref|YP_705969.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
gi|110822527|gb|ABG97811.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
Length = 595
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 157/336 (46%), Gaps = 51/336 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G + L LP HV+ RA + F + + +TA + L D ++PH+++SVP V+E +
Sbjct: 221 GRRTLMFLPLAHVFARAISFGAFDAKVTVAHTADLTTLLDQFAAFKPHFILSVPRVFEKV 280
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +A ++ Y+G + +K + +A +
Sbjct: 281 YN---------------------------SAKQKAYDGGKGSIFEKASATAIAYSEAQDN 313
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
L H L +KLVY K+++A+G VSGG +L + F+ IGV V GYG
Sbjct: 314 GGAGLGLKLKHALFDKLVYSKLRTALGGECDRAVSGGAALGARLGHFFRGIGVPVYEGYG 373
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+S I+ +G+VG PI+ KI G G + ++G V GY
Sbjct: 374 LTETSAAISVNTTRAQKVGTVGKPIDGHAAKI-----------GEDGELLLKGPVVFGGY 422
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ N AT +++ DGW +TGD+G I G + + GR K+ IV + G+NV
Sbjct: 423 WHNEQATAESI-RDGWFHTGDLGSIDEE----------GYISITGRKKEIIVTAGGKNVA 471
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+A LI Q +V+G + GA+I D E
Sbjct: 472 PAVLEDALRAHPLISQCLVVGDGKPFIGALITLDSE 507
>gi|443493344|ref|YP_007371491.1| long-chain-fatty-acid-CoA ligase FadD15_1 [Mycobacterium liflandii
128FXT]
gi|442585841|gb|AGC64984.1| long-chain-fatty-acid-CoA ligase FadD15_1 [Mycobacterium liflandii
128FXT]
Length = 600
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 160/340 (47%), Gaps = 57/340 (16%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYET 129
G++ L LP HV R+ F F+ + + YT ++NL L ++P ++SVP V+E
Sbjct: 223 KGERLLVFLPLAHVLARSLSMFAFANKVTIGYTGDIKNLVATLGVFKPTVVVSVPRVFEK 282
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ T+ R R +I F L +V I W
Sbjct: 283 VYN-------TAELKARDSGRGMI---------------FDLA--------VVTAIAWSK 312
Query: 190 ARIICA---ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 245
A +L H L ++LVY+K++SA+G A VSGG L + FY IG+ +
Sbjct: 313 ALDTGGAGLLLRARHALFDRLVYEKLRSALGGDCHAAVSGGAPLGTRLCHFYRGIGLTIY 372
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGLTE+S I A R +G+VG+ + + I AE EVL VRG V
Sbjct: 373 EGYGLTETSAAITANRIGQERVGTVGNLLPGNSMAI--AEDGEVL---------VRGGVV 421
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
GY+ N AT +A+ DGW +TGD+G + G L + GR K+ IV + G
Sbjct: 422 FTGYWHNEKATAEAI-VDGWFHTGDLGSVDD----------AGFLSIVGRKKEIIVTAGG 470
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+NV P LE+ LI Q +V+G ++ GA+I D E
Sbjct: 471 KNVAPAVLEDQLRAHPLISQAMVVGDNRPFVGALIAIDPE 510
>gi|326382529|ref|ZP_08204220.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
gi|326198648|gb|EGD55831.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
Length = 600
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 156/337 (46%), Gaps = 51/337 (15%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYET 129
+G + L LP HV RA G+E+ YTA + NL ++P ++SVP V+E
Sbjct: 224 DGKRLLLFLPMAHVLARAINLVAIEAGVEVGYTADIANLLPTFAVFKPSLILSVPRVFEK 283
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ ++ + + ++ Y+ K+ + L R +
Sbjct: 284 VYNSARQGAHDGGKGK--IFDLAADVAVEYSTAKQNGDVSLLLRAK-------------- 327
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
H + +KLVY K+++A+G + + +SGG L + F+ +G+ V GY
Sbjct: 328 -----------HAVFDKLVYSKLRTALGGVCELAISGGAPLGARLGHFFSGVGIPVYEGY 376
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTE++ IA P +G+VG PI ++I D G + + G V G
Sbjct: 377 GLTETTAAIAVNTPGEVKVGTVGRPIPGNAVRIAD-----------DGEILLSGEVVFTG 425
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y++N AT A+ DGW +TGD+G + G L + GR K+ IV + G+NV
Sbjct: 426 YWQNDDATAAAI-TDGWFHTGDLGALDEE----------GYLRITGRKKEIIVTAGGKNV 474
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P +E+ S+L+ Q VV+G + GA+I D E
Sbjct: 475 SPAPMEDIIRASALVSQAVVVGDQKPFIGALITVDPE 511
>gi|453380889|dbj|GAC84413.1| long-chain fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 605
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 160/345 (46%), Gaps = 49/345 (14%)
Query: 63 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMI 121
L D + + + L LP HV RA G E+ +T+ ++ L D+ ++P ++
Sbjct: 219 LLDELRRRDHKRLLMFLPLAHVLARAITLVAIEAGAEVGHTSDIKTLVDEFAVFKPSLIL 278
Query: 122 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 181
SVP V+E +Y+ Q++ + S + + A + AY+ +
Sbjct: 279 SVPRVFEKVYNSAQQKAYDESPVKGKIFDAAAETAVAYSEAREKGS-------------- 324
Query: 182 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 240
I +L H + + LVYKK+++A+G +SGGG L + F+ +
Sbjct: 325 -----------IGLVLKLRHAVFDALVYKKLRAALGGECGMAISGGGPLGARLGHFFSGV 373
Query: 241 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 300
G+ V GYGLTE++ + P+ +G+VG P++ +++ G G + +
Sbjct: 374 GIPVFEGYGLTETTAAFSVNTPSAWKIGTVGKPLSGNSVRV-----------GEDGELLL 422
Query: 301 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 360
RG V Q Y++NP AT A+ DGW +TGD+G + G + + GR K+ I
Sbjct: 423 RGPVVFQEYWQNPEATASAI-VDGWFHTGDLGTVDSE----------GFISITGRKKELI 471
Query: 361 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
V + G+NV P LE+ L+ Q +V+G + A+I D E
Sbjct: 472 VTAGGKNVSPAGLEDVIRAHPLVSQAMVVGDAKPFVAALITIDPE 516
>gi|407452010|ref|YP_006723735.1| long-chain acyl-CoA synthetase [Riemerella anatipestifer RA-CH-1]
gi|403312994|gb|AFR35835.1| Long-chain acyl-CoA synthetases (AMP-forming) [Riemerella
anatipestifer RA-CH-1]
Length = 585
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 171/364 (46%), Gaps = 48/364 (13%)
Query: 76 LSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 134
L+ LP H++ER+ F S+G ++ + + + L+ +P M +VP Y+ +Y +
Sbjct: 213 LAFLPLSHIFERSWTLFCLSKGAKVSFLENTKLIAHALEEVKPSMMCAVPRFYQKIYGAL 272
Query: 135 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 194
++ + SS+ ++ + + I + ++R K + +AL D
Sbjct: 273 REMVEKSSSTKKKIFDWALNIGTQCSEYRR---------KGKSVPFGLALKD-------- 315
Query: 195 AILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTES 253
+A KLV+ KI+ +G + + GG ++ I F++A+G+ + VGYGLTE+
Sbjct: 316 -------KIASKLVFNKIKQKLGGNLWFMPCGGAAISPEILKFFDAMGIHITVGYGLTET 368
Query: 254 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 313
+ + + G PI T+IKI E NE+L V+GS VM+GY+ P
Sbjct: 369 TATLTCFPAYNYEYETAGIPIGDTQIKI--GEHNEIL---------VKGSGVMKGYYNLP 417
Query: 314 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 373
T +A EDGW TGD G I G L + R KD + S G+ + P +
Sbjct: 418 EETAKAFTEDGWFRTGDAGVIE-----------NGTLKITDRIKDLMKTSNGKYITPQVI 466
Query: 374 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 433
E S+ I+Q +V+ + + A+IVP+ E + K + + D +E+ + I+
Sbjct: 467 ENILTNSNYIQQAMVVAEGKPFVTAVIVPNFEALKEKVKAMKLSMTDWNEIVSSEKITQF 526
Query: 434 YGEL 437
Y ++
Sbjct: 527 YHDI 530
>gi|296129245|ref|YP_003636495.1| AMP-dependent synthetase and ligase [Cellulomonas flavigena DSM
20109]
gi|296021060|gb|ADG74296.1| AMP-dependent synthetase and ligase [Cellulomonas flavigena DSM
20109]
Length = 602
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 160/334 (47%), Gaps = 50/334 (14%)
Query: 74 KFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYS 132
+ L +P HV+ R G + + RNL DL +QP Y+++VP V+E +Y+
Sbjct: 226 RTLLFMPLAHVFARFIQVLCVESGAVMGHAPDTRNLLPDLASFQPSYLLAVPRVFEKVYN 285
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
+++ + +A R + R +++ AY+ +G PS
Sbjct: 286 SAEQKAGSGAALR--IFRWAAKVAIAYSRALETPDG---------PS------------- 321
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
A L H LA++LV++K+++ +G ++ VSGG L + FY IGV+V GYGLT
Sbjct: 322 --AALRAQHRLADRLVHRKLRAVLGGRAEFAVSGGAPLGERLGHFYRGIGVQVLEGYGLT 379
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
E++ A RP +G+VG P+ T +++ D + + + G V +GY
Sbjct: 380 ETTAPTAVNRPGLTKIGTVGPPMPGTSVRVDDDDQ-----------IWIAGPHVFRGYRH 428
Query: 312 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 371
P T + + DGW TGDIG + G L + GR+K+ IV + G+NV P
Sbjct: 429 MPEETAETV-VDGWFRTGDIGTLDED----------GYLRITGRSKEIIVTAGGKNVAPA 477
Query: 372 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
LE+ L+ Q+VV+G + GA++ D E
Sbjct: 478 VLEDRLRGHPLVSQVVVVGDQRPFIGALVTLDAE 511
>gi|365540244|ref|ZP_09365419.1| Long-chain-fatty-acid--CoA ligase [Vibrio ordalii ATCC 33509]
Length = 602
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 177/388 (45%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA ++I G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYILYCGATNCYLQDTMQVRDALSDLKPTVMCAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C + +QPS++
Sbjct: 280 SAIHEKVSKAPLHRKVL--------FTWAVNMGAKMALC-HQETRQPSFM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+K+V K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKKSYALADKIVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI D NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDRCFNPDSIGMSMPGAQVKIGD--NNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K T A DE G+L TGD G I G + + R K+ + S G+ + P
Sbjct: 425 KMAEETALAFDEQGFLKTGDAGHIDEQ----------GNVFITDRIKELMKTSGGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + + AK L+I + D EL K
Sbjct: 475 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEVYAKELNIKYHDRLELIKNNQV 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|427384503|ref|ZP_18881008.1| hypothetical protein HMPREF9447_02041 [Bacteroides oleiciplenus YIT
12058]
gi|425727764|gb|EKU90623.1| hypothetical protein HMPREF9447_02041 [Bacteroides oleiciplenus YIT
12058]
Length = 616
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 188/408 (46%), Gaps = 57/408 (13%)
Query: 63 LYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIELMYTAVR--NLKDDLQRYQPH 118
++DI + D+ +SM LP HV+E+A Y +G+++ +R +++ ++ +P
Sbjct: 226 IHDIRLVDMTDQDISMNFLPLTHVFEKAWTYLCIYKGVQICIN-LRPVDIQTTIKEIRPT 284
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
M SVP +E +Y+G+Q++I + ++ + I++ +I+ R K P
Sbjct: 285 LMCSVPRFWEKVYAGVQEKIAQETGLKKAMMLDAIKVG-------KIH-NIDYLRKGKTP 336
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLF 236
++ L + EK VY ++ IGI + G ++P I F
Sbjct: 337 PLMLHL---------------KYKFYEKTVYALLKKTIGIENGNFFPTAGAAVPDEICEF 381
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
++G+ + VGYGLTES+ ++ + +GSVG + E+KI E NE+L
Sbjct: 382 VHSVGINMLVGYGLTESTATVSCFLNSGYEIGSVGTIMPDVEVKI--GEENEIL------ 433
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
+RG + +GY+K AT A+D+DGW +TGD G++ G L L R
Sbjct: 434 ---LRGKTITKGYYKKAEATAAAIDKDGWFHTGDAGYLK-----------GDQLYLTERI 479
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
KD S G+ V P LE I QI +I ++ A+IVP V AK I
Sbjct: 480 KDLFKTSNGKYVSPQALETKLAIDRYIDQIAIIADQRKFVSALIVPVYGYVKEYAKEKGI 539
Query: 417 VHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
+ D EL + I L+ R T + F Q+ ++ EPF++
Sbjct: 540 EYKDMEELLQHPKILGLF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 586
>gi|296139029|ref|YP_003646272.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
gi|296027163|gb|ADG77933.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
Length = 591
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 165/359 (45%), Gaps = 57/359 (15%)
Query: 55 MTNFQIRSLYDIV------PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 107
+T+ + S YD + A+ GD + LP H++ RA GI + +TA + N
Sbjct: 195 LTHENLLSEYDAIYDGLSQMAQPGDSTVMFLPLAHIFARAVSVAAVQHGIRVAHTADLSN 254
Query: 108 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 167
L +P Y++SVP V+E +Y+ + + + + A + + ++ K
Sbjct: 255 LTGLFAELKPSYILSVPRVFEKVYNTMSSK--AEEGGKGKIFHAAVETAIEFSKAK---- 308
Query: 168 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 226
D A ++ + H + +KLVY K++ A+G + VSGG
Sbjct: 309 ------------------DTGGAGLVLKLK---HAVFDKLVYSKLREALGGNCTCAVSGG 347
Query: 227 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 286
L + F+ GV V GYGL+E+S I P+ +G+VG P+ E+ I AE
Sbjct: 348 APLGARLGHFFRGAGVPVYEGYGLSETSAAITCNSPSDQKVGTVGRPLPGQEVAI--AED 405
Query: 287 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 346
E+L +RG V GY+ P AT AL DGW +TGD+G +
Sbjct: 406 GEIL---------LRGPVVFGGYWGLPEATADAL-RDGWFHTGDLGAL----------DA 445
Query: 347 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
G L + GR K+ +V + G+NV P + E+A + L+ Q +++G Q GA+I D E
Sbjct: 446 DGYLSITGRKKEILVTAAGKNVAPAQTEDALRQHPLVSQAMLVGDKQPFVGALITLDPE 504
>gi|386833922|ref|YP_006239236.1| FAA1 protein [Pasteurella multocida subsp. multocida str. 3480]
gi|385200622|gb|AFI45477.1| FAA1 protein [Pasteurella multocida subsp. multocida str. 3480]
Length = 606
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 170/366 (46%), Gaps = 47/366 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 131
D LS LP H++ERA ++ RG Y N +++ L +P M +VP YE +Y
Sbjct: 223 DSSLSFLPLSHIFERAWVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIY 282
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ + ++ + RR++ I + F+ I ++K+P
Sbjct: 283 TAVWDKVQKAPLFRRMIFNWAIAV--GQKRFQFI--------SKKKP------------- 319
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
I +L + LA+KLV K++ +G + GG L +I LF+ +IG+ V++GYG+
Sbjct: 320 -IPFVLRQQYALADKLVLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGM 378
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ S+G + E+KI E NE+L VRG VM+GY+
Sbjct: 379 TETTATVSCWEEGHFEPNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYY 427
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + EDG+L TGD G P G L + R K+ + S G+ + P
Sbjct: 428 KKPQETADSFTEDGFLKTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAP 477
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + I QI VI ++ A+IVP + AK+L+I + D EL K I
Sbjct: 478 QYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDI 537
Query: 431 SLLYGE 436
++ +
Sbjct: 538 LQMFEQ 543
>gi|407452392|ref|YP_006724117.1| hypothetical protein B739_1625 [Riemerella anatipestifer RA-CH-1]
gi|403313376|gb|AFR36217.1| hypothetical protein B739_1625 [Riemerella anatipestifer RA-CH-1]
Length = 593
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 179/394 (45%), Gaps = 63/394 (15%)
Query: 68 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLV 126
P + K LS LP H++ER YF + GI + + ++ + ++++ +PHYM VP +
Sbjct: 213 PQDTNLKSLSFLPICHIFERMLFYFYINSGISIYFAESIDKMGENIKEVKPHYMTVVPRL 272
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
E +Y I + ++ + A+ + A K I +PS L +I
Sbjct: 273 IEKVYDKIYDKGISAGGLK---AKIFLWALGVNKAKKEI----------GKPSGLKEII- 318
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQ 245
A+KLV+KK + +G + +SG +L ++ ++ G+ +
Sbjct: 319 -----------------ADKLVFKKWREGLGGNIITLISGSAALAPRLNRMFQNAGISIL 361
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGLTE+SPVIA +G+VG + + ++KI G + V+G V
Sbjct: 362 EGYGLTETSPVIAVNTFNKMKVGTVGPVLPNLDVKI-----------QGDGEISVKGPSV 410
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
+GY+K+ T++A EDG+ TGDIG I G L + R K+ S G
Sbjct: 411 TKGYYKDEEKTQEAFTEDGYFKTGDIGHIDDE----------GFLHITDRKKEMFKTSGG 460
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASEL 424
+ + P +E A S I QI+V+G+ ++ P A++ PD + A+R +I + E+
Sbjct: 461 KYIAPQMIENMAKASKFIEQIMVVGEGEKMPCALVQPDFHFAVNWAERHNINIGKTPEEI 520
Query: 425 SK--------EKTISLLYGELRKWTSKCSFQIGP 450
+K EK I L +L W ++ P
Sbjct: 521 AKNPQFKARIEKEIEYLNTKLGNWEKIKKIELTP 554
>gi|68248553|ref|YP_247665.1| long chain fatty acid CoA ligase [Haemophilus influenzae 86-028NP]
gi|68056752|gb|AAX87005.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
86-028NP]
Length = 607
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 167/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 225 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 284
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 285 IYAAVLDKVQKAPKLRQIMFHWTISVGQKH---------FDLRANNKAIPFL-------- 327
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 328 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 380
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 381 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGKMVMKG 429
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA +DG+L TGD G G L + R K+ + S G+ +
Sbjct: 430 YYKKPEETAQAFTKDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 479
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+++I + D EL K
Sbjct: 480 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQINIKYHDRLELLKNS 539
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 540 DILKMFEQ 547
>gi|294634995|ref|ZP_06713512.1| putative CoA ligase [Edwardsiella tarda ATCC 23685]
gi|291091594|gb|EFE24155.1| putative CoA ligase [Edwardsiella tarda ATCC 23685]
Length = 603
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 171/370 (46%), Gaps = 48/370 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYET 129
+ D L LP HV+ERA +++ G + +Y NL ++ +Q +P M +VP YE
Sbjct: 223 DQDVSLCFLPLSHVFERAWSFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPRFYEK 282
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S +Q ++ + RR + R + F R G
Sbjct: 283 IFSAVQAKVAQAPWLRRQLFRWAVWC--GEQRFLRERAG--------------------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
R + ++ +H A++LV K++ +G + + G L + LF++A+G+ ++ GY
Sbjct: 320 -RPLSGMMAAMHRAADRLVLGKLRDILGGRVRFLPAAGAKLDDQVILFFQALGLNIKYGY 378
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE+ ++ GS+G P+ E++I AE NE+ +VRG VM+G
Sbjct: 379 GMTETCATVSCWEEHDFRFGSIGRPLPGIEVRI--AEENEI---------QVRGPIVMRG 427
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
YF P T Q+ DGWL TGD G + G L + R KD + S G+ +
Sbjct: 428 YFNKPQETAQSFTADGWLKTGDAGALDAQ----------GNLFITERLKDLMKTSNGKYI 477
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E R I Q+ VI ++ A+IVP + + A+ +++ + D +L +
Sbjct: 478 APQLVEGTLARDRFIEQVAVIADARKFVSALIVPCFDALEEYARSINLKYHDRLDLLRHS 537
Query: 429 TISLLYGELR 438
I ++ ELR
Sbjct: 538 HIVEMF-ELR 546
>gi|238755757|ref|ZP_04617090.1| long-chain-fatty-acid--CoA ligase [Yersinia ruckeri ATCC 29473]
gi|238706049|gb|EEP98433.1| long-chain-fatty-acid--CoA ligase [Yersinia ruckeri ATCC 29473]
Length = 599
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 201/445 (45%), Gaps = 60/445 (13%)
Query: 14 YMSSFFSMFKVIFITLFFSR---RDL-PLFSFVLIDLNTWMPIPKMTNFQ--IRSLY--- 64
Y+SSF + L +R RDL LF+ + T P M +++ LY
Sbjct: 154 YLSSFETEPDAEIQALLNARIDSRDLNDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHD 213
Query: 65 DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISV 123
+ + D LS LP HV+ERA +++ G + +Y + + ++ +Q P M +V
Sbjct: 214 ERLTLTTDDISLSFLPLSHVFERAWSFYVMHTGAQNVYISNTDWVRQAMQAVSPTVMCAV 273
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P YE ++S I +++ + RR + +A KR F + +QPS+
Sbjct: 274 PRFYEKVFSAIHEKVAQAKWYRRAL------FHWAVGCGKR---KFRQQQQGRQPSWFSN 324
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGV 242
L+ LA++LV +K++ +G + + G L ++ LF++AIG+
Sbjct: 325 ---------------QLNRLADRLVLQKLRGVLGGHVRFLPAAGARLDDNVILFFQAIGI 369
Query: 243 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 302
++ GYG+TE+ ++ GS+G P+ E+++ G++ +++RG
Sbjct: 370 NIKYGYGMTETCATVSCWEEGRFRFGSIGKPLPGIEVRM-----------GAENEIQIRG 418
Query: 303 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
VM+GY P T +DGWL TGD G I G L + R KD +
Sbjct: 419 PIVMRGYLNKPEETAATFTQDGWLKTGDAGAIDQQ----------GNLFITERLKDLMKT 468
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 422
S G+ + P +E + I QI VI ++ A+IVP E + AK +++ + D
Sbjct: 469 SGGKYIAPQMIEGTLGQDRFIEQIAVIADTRKFVSALIVPCFESLEEYAKSINLKYHDRL 528
Query: 423 ELSKEKTISLLY----GELRKWTSK 443
EL + I ++ E++K SK
Sbjct: 529 ELLRHSHIVEMFEQRLKEMQKELSK 553
>gi|342904876|ref|ZP_08726672.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21621]
gi|341952332|gb|EGT78862.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21621]
Length = 602
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 166/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 217 DQDVSLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 276
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 277 IYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKTVPFL-------- 319
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 320 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 372
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 373 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKG 421
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K T QA EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 422 YYKKSEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 471
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 472 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNS 531
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 532 EILKMFEQ 539
>gi|153871945|ref|ZP_02000979.1| AMP-dependent synthetase and ligase [Beggiatoa sp. PS]
gi|152071588|gb|EDN69020.1| AMP-dependent synthetase and ligase [Beggiatoa sp. PS]
Length = 602
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 167/350 (47%), Gaps = 55/350 (15%)
Query: 73 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 130
D+FLS LP H +ER GY++ G + Y +++ + DL +P ++SVP +YE +
Sbjct: 225 DRFLSFLPLSHTFERTGGYYLPMVVGANVAYARSIQQIAQDLIALRPTILMSVPRIYEQV 284
Query: 131 YSGIQKQIFTSSAARRVVARALIRIS---FAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
Y+ IQ Q+ S R + +++ F Y + + L + ++D
Sbjct: 285 YAKIQNQLDKKSPLARHLFTLGVQVGWRHFEYHQGRASWHPKLLLWPLLRRLVAKPVLDK 344
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
L R+ AI SGG +L + + +G+ + G
Sbjct: 345 LGGRMRLAI---------------------------SGGAALSPKVAQLFVGLGLNLLQG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTE+SP+I+ RP N+ S+G + ++K+ E +E+L + +M
Sbjct: 378 YGLTETSPIISVNRPNDNIPDSIGTTLPDVKVKL--GENDELL---------TQSPYIML 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG-GVLVLEGRAKDTIVLSTGE 366
GY+KN AT+ +D+DGWL+TGD ++R+ G L + GR K+ IV+ GE
Sbjct: 427 GYWKNSEATQNMIDKDGWLHTGD-----------KARQDAIGHLYITGRIKEIIVMGNGE 475
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
V P ++E SL Q+++IG+ + A++V + E+ + AK L+I
Sbjct: 476 KVPPTDMEMVIGTDSLFEQVMIIGEGKPFLAALVVLNIEQWHLFAKDLTI 525
>gi|395491749|ref|ZP_10423328.1| long-chain fatty-acid--CoA ligase [Sphingomonas sp. PAMC 26617]
Length = 594
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 163/341 (47%), Gaps = 67/341 (19%)
Query: 75 FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP H YE + G +F + G ++ Y+ + L +++ +P M+ VP ++E L +
Sbjct: 224 FLSFLPLSHAYEHSGGQFFPIALGAQIYYSEGLDKLAANIEEVRPTMMVVVPRLFELLRA 283
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I K + + K +YL+ + L ++
Sbjct: 284 RISKAV---------------------------------EKQGKLSTYLLGRAEALGSKR 310
Query: 193 ICA----ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
+ P+ LL + KIQ G KA VSGG L + F++AIG+ V G
Sbjct: 311 AAGKAGLLDKPMDLLLGATLRPKIQKRFGGRIKAMVSGGAPLTPEVGTFFDAIGITVLQG 370
Query: 248 YGLTESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
YG TES+PVI+ RP + + +VG P+ +TE++I D G + VRG VM
Sbjct: 371 YGQTESAPVISCNRPKVGIKMDTVGPPLPNTEVRIAD-----------DGEILVRGELVM 419
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GY++N + T + L +DGWL+TGDIG I ++GR + + R KD IV GE
Sbjct: 420 KGYWRNDAETARVL-KDGWLHTGDIGVI---DAKGR-------IQITDRKKDIIVNDKGE 468
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRP--GAIIVPDKE 405
NV P ++E I Q ++ G RRP A+IVPD E
Sbjct: 469 NVAPQKVEGMLTLQPEISQAMLFG--DRRPYMVAVIVPDPE 507
>gi|448350461|ref|ZP_21539274.1| AMP-dependent synthetase and ligase [Natrialba taiwanensis DSM
12281]
gi|445636731|gb|ELY89891.1| AMP-dependent synthetase and ligase [Natrialba taiwanensis DSM
12281]
Length = 680
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 67/357 (18%)
Query: 75 FLSMLPPWHVYERACGYFIF-SRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYS 132
+S LP HV+ER G+F+ + G + Y + LK+D + QP SVP VYE +Y
Sbjct: 263 LVSYLPLAHVFERTAGHFLLVAAGATIAYAESSDTLKEDFRTVQPTGATSVPRVYEKIYD 322
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I+++ S R+ A T R Y A
Sbjct: 323 AIREEATESPIKERIFDWA--------TDVSRAY---------------------YRADD 353
Query: 193 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 251
IL +A+KLV+ K++ A+G + + VSGGGSL + Y +G+ + GYGLT
Sbjct: 354 PGPILEFKLSVADKLVFSKVKEALGGNVEMLVSGGGSLSEDLCTLYHGMGLPILEGYGLT 413
Query: 252 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVKVRGSQVMQG 308
E+SPV+ P +G+VG + ++ + ++ + + G G + VRG V +G
Sbjct: 414 ETSPVVTTNPPEEPKIGTVGPAVIDCDVTVDESIVPDGDAASTPGETGELLVRGPNVTEG 473
Query: 309 YFKNPSATKQAL------------DEDG----------WLNTGDIGWIAPHHSRGRSRRC 346
Y+ P+AT +A D DG W TGDI + P
Sbjct: 474 YWNKPAATDRAFTADAPGEGASDADRDGSASETDADDEWFRTGDIVTVRPD--------- 524
Query: 347 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 403
G + R K IVLSTG+NV P +E+ + L+ Q +V+G ++ GA+IVP+
Sbjct: 525 -GYIEFHERTKQLIVLSTGKNVAPAPIEDTFAANELVEQCLVVGDGEKFVGALIVPN 580
>gi|404254905|ref|ZP_10958873.1| long-chain fatty-acid--CoA ligase [Sphingomonas sp. PAMC 26621]
Length = 594
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 163/341 (47%), Gaps = 67/341 (19%)
Query: 75 FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP H YE + G +F + G ++ Y+ + L +++ +P M+ VP ++E L +
Sbjct: 224 FLSFLPLSHAYEHSGGQFFPIALGAQIYYSEGLDKLAANIEEVRPTMMVVVPRLFELLRA 283
Query: 133 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 192
I K + + K +YL+ + L ++
Sbjct: 284 RISKAV---------------------------------EKQGKLSTYLLGRAEALGSKR 310
Query: 193 ICA----ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 247
+ P+ LL + KIQ G KA VSGG L + F++AIG+ V G
Sbjct: 311 AAGKAGLLDKPMDLLLGATLRPKIQKRFGGRIKAMVSGGAPLTPEVGTFFDAIGITVLQG 370
Query: 248 YGLTESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
YG TES+PVI+ RP + + +VG P+ +TE++I D G + VRG VM
Sbjct: 371 YGQTESAPVISCNRPKVGIKMDTVGPPLPNTEVRIAD-----------DGEILVRGELVM 419
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
+GY++N + T + L +DGWL+TGDIG I ++GR + + R KD IV GE
Sbjct: 420 KGYWRNDAETARVL-KDGWLHTGDIGVI---DAKGR-------IQITDRKKDIIVNDKGE 468
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRP--GAIIVPDKE 405
NV P ++E I Q ++ G RRP A+IVPD E
Sbjct: 469 NVAPQKVEGMLTLQPEISQAMLFG--DRRPYMVAVIVPDPE 507
>gi|386322121|ref|YP_006018283.1| Long-chain acyl-CoA synthetases (AMP-forming) [Riemerella
anatipestifer RA-GD]
gi|416111912|ref|ZP_11592936.1| Long-chain-fatty-acid--CoA ligase [Riemerella anatipestifer RA-YM]
gi|442314917|ref|YP_007356220.1| hypothetical protein G148_1222 [Riemerella anatipestifer RA-CH-2]
gi|315022208|gb|EFT35236.1| Long-chain-fatty-acid--CoA ligase [Riemerella anatipestifer RA-YM]
gi|325336664|gb|ADZ12938.1| Long-chain acyl-CoA synthetases (AMP-forming) [Riemerella
anatipestifer RA-GD]
gi|441483840|gb|AGC40526.1| hypothetical protein G148_1222 [Riemerella anatipestifer RA-CH-2]
Length = 594
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 177/394 (44%), Gaps = 63/394 (15%)
Query: 68 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLV 126
P K LS LP H++ER YF + GI + + ++ + ++++ QPHYM VP +
Sbjct: 213 PQNTNLKSLSFLPICHIFERMLFYFYINSGISIYFAESIDKMGENIKEVQPHYMTVVPRL 272
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
E +Y I + ++ + + + ++ A + PS L +I
Sbjct: 273 IEKVYDKIYDKGISAGGLKAKIFLWALGVNKAKKGIGK-------------PSGLKEII- 318
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQ 245
A+KLV+KK + +G + +SG +L ++ ++ G+ +
Sbjct: 319 -----------------ADKLVFKKWREGLGGNIITLISGSAALAPRLNRMFQNAGISIL 361
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGLTE+SPVIA +G+VG + + ++KI G + V+G V
Sbjct: 362 EGYGLTETSPVIAVNTFNKMKVGTVGPVLPNLDVKI-----------QGDGEISVKGPSV 410
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
+GY+K+ T++A EDG+ TGDIG I G L + R K+ S G
Sbjct: 411 TKGYYKDDEKTQEAFTEDGYFKTGDIGHIDDE----------GFLHITDRKKEMFKTSGG 460
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASEL 424
+ + P +E A S I QI+V+G+ ++ P A++ PD + A+R +I + E+
Sbjct: 461 KYIAPQMIENMAKASKFIEQIMVVGEGEKMPCALVQPDFHFAVNWAERHNINIGTTPEEI 520
Query: 425 SK--------EKTISLLYGELRKWTSKCSFQIGP 450
+K EK I L +L W ++ P
Sbjct: 521 AKSPQLKARIEKEIEHLNTKLGSWEKIKKIELTP 554
>gi|406675652|ref|ZP_11082839.1| hypothetical protein HMPREF1170_01047 [Aeromonas veronii AMC35]
gi|404627042|gb|EKB23848.1| hypothetical protein HMPREF1170_01047 [Aeromonas veronii AMC35]
Length = 596
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 180/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L MLP HV+ERA Y++ G E +Y + + D + QP M +VP +YE Y
Sbjct: 218 DVSLCMLPLSHVFERAWSYYVLYCGAENVYIRDPQKVMDVIGEVQPTVMCAVPRLYEKAY 277
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ IQ ++ + A RR + F + ++ + TR Q S L LW
Sbjct: 278 AMIQAKVAQAPALRRAL--------FGWAT--KVGKQMVATR-QAGKSASPQLYGQLW-- 324
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
LAE+LV++K+++ G ++ G L ++LF++A+G+ ++ GYG+
Sbjct: 325 -----------LAERLVFRKLRARFGGRTRFLPVAGARLADDVNLFFQAMGLNLKYGYGM 373
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ + + LGS+G +N E+K+ E NE+L VR VM+GY+
Sbjct: 374 TETTATVCCYEDSQFKLGSIGTALNGIEVKL--GENNELL---------VRSPTVMRGYY 422
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P AT + + EDG+L TGD G + G + R K+ + S G+ V P
Sbjct: 423 NKPDATAEVMTEDGFLRTGDAGELDSQ----------GNIYFTERLKELMKTSNGKYVAP 472
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E + I QI ++ + A+IVP E + A+ +++ + +EL +
Sbjct: 473 QLVEGTIGKDRFIEQIAIVADARHFVSALIVPCFESLEEYARSINLQYQCKTELLRHSRV 532
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
E I+ L EL K+ F + P
Sbjct: 533 MEFFEARIADLQKELAKFEQVKKFTLLP 560
>gi|425063621|ref|ZP_18466746.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida X73]
gi|404382175|gb|EJZ78636.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida X73]
Length = 606
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 170/366 (46%), Gaps = 47/366 (12%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 131
D LS LP H++ERA ++ RG Y N +++ L +P M +VP YE +Y
Sbjct: 223 DSSLSFLPLSHIFERAWVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIY 282
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ + ++ + RR++ I + F+ I ++K+P
Sbjct: 283 TAVWDKVQKAPLFRRMIFNWAIAV--GQKRFQFI--------SKKKP------------- 319
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
I +L + LA+KLV K++ +G + GG L +I LF+ +IG+ V++GYG+
Sbjct: 320 -IPFVLRQQYALADKLVLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGM 378
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ S+G + E+KI E NE+L VRG VM+GY+
Sbjct: 379 TETTATVSCWEEGHFEPNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYY 427
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + EDG+L TGD G P G L + R K+ + S G+ + P
Sbjct: 428 KKPQETADSFTEDGFLKTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAP 477
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 430
+E + I QI VI ++ A+IVP + AK+L+I + D EL K I
Sbjct: 478 QYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDI 537
Query: 431 SLLYGE 436
++ +
Sbjct: 538 LQMFEQ 543
>gi|433456253|ref|ZP_20414306.1| AMP-dependent synthetase and ligase [Arthrobacter crystallopoietes
BAB-32]
gi|432196526|gb|ELK52974.1| AMP-dependent synthetase and ligase [Arthrobacter crystallopoietes
BAB-32]
Length = 604
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 159/344 (46%), Gaps = 61/344 (17%)
Query: 69 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVY 127
A G + + LP HV+ R + G + +TA V+NL DLQ Y+P ++++VP V+
Sbjct: 221 AHEGARTIMFLPLAHVFARFISVLCVACGATVAHTADVKNLLPDLQSYRPTFILAVPRVF 280
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E +Y+ + S R A A I+
Sbjct: 281 EKVYNSSMLKAEDSGKGRIFHAAAETAIA------------------------------- 309
Query: 188 LWARIICAILWPL-----HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 241
W+R PL H L +KLV+ KI+ A+G + VSGGG L + F+ IG
Sbjct: 310 -WSRAEAVGKVPLALRLKHKLFDKLVFHKIREAMGGRVEYAVSGGGPLGERLGHFFHGIG 368
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 301
+ V GYGLTE++ + P +G+VG P+ ++I AE E+L +KGI
Sbjct: 369 LLVLEGYGLTETTAPVTVNTPQLIKIGTVGAPLPGNAVRI--AEDGEIL---AKGIC--- 420
Query: 302 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 361
VM+GYF P T++A D DGW TGDIG + G + + GR K+ IV
Sbjct: 421 ---VMRGYFGRPDLTEEAFD-DGWFRTGDIGEL----------DADGFVHITGRKKEIIV 466
Query: 362 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+ G+NV P LE+ +L+ Q VV+G + A++ D E
Sbjct: 467 TAGGKNVIPALLEDQIRADALVSQCVVLGDQRPFISALVTLDTE 510
>gi|313205896|ref|YP_004045073.1| amp-dependent synthetase and ligase [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383485217|ref|YP_005394129.1| polyprenyl synthetase [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|312445212|gb|ADQ81567.1| AMP-dependent synthetase and ligase [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|380459902|gb|AFD55586.1| polyprenyl synthetase [Riemerella anatipestifer ATCC 11845 = DSM
15868]
Length = 594
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 177/394 (44%), Gaps = 63/394 (15%)
Query: 68 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLV 126
P K LS LP H++ER YF + GI + + ++ + ++++ QPHYM VP +
Sbjct: 213 PQNTNLKSLSFLPICHIFERMLFYFYINSGISIYFAESIDKMGENIKEVQPHYMTVVPRL 272
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
E +Y I + ++ + + + ++ A + PS L +I
Sbjct: 273 IEKVYDKIYDKGISAGGLKAKIFLWALGVNKAKKGIGK-------------PSGLKEII- 318
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQ 245
A+KLV+KK + +G + +SG +L ++ ++ G+ +
Sbjct: 319 -----------------ADKLVFKKWREGLGGNIITLISGSAALAPRLNRMFQNAGISIL 361
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGLTE+SPVIA +G+VG + + ++KI G + V+G V
Sbjct: 362 EGYGLTETSPVIAVNTFNKMKVGTVGPVLPNLDVKI-----------QGDGEISVKGPSV 410
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
+GY+K+ T++A EDG+ TGDIG I G L + R K+ S G
Sbjct: 411 TKGYYKDDEKTQEAFTEDGYFKTGDIGHIDDE----------GFLHITDRKKEMFKTSGG 460
Query: 366 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASEL 424
+ + P +E A S I QI+V+G+ ++ P A++ PD + A+R +I + E+
Sbjct: 461 KYIAPQMIENMAKASKFIEQIMVVGEGEKMPCALVQPDFHFAVNWAERHNINIGTTPEEI 520
Query: 425 SK--------EKTISLLYGELRKWTSKCSFQIGP 450
+K EK I L +L W ++ P
Sbjct: 521 AKSPQLKARIEKEIEHLNTKLGSWEKIKKIELTP 554
>gi|386265628|ref|YP_005829120.1| long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase)
(LACS) [Haemophilus influenzae R2846]
gi|309972864|gb|ADO96065.1| Probable long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA
synthetase) (LACS) [Haemophilus influenzae R2846]
Length = 607
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 167/368 (45%), Gaps = 47/368 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYET 129
+ D LS LP H++ERA +I RG L Y N ++ L +P M +VP YE
Sbjct: 225 DQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEK 284
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+ + ++ + R+++ I + + F L N K +L
Sbjct: 285 IYAAVLDKVQKAPKLRQIMFHWTISVGQKH---------FDLRANNKAIPFL-------- 327
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 248
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GY
Sbjct: 328 -------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGY 380
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE++ ++ S+G + E+KI E NE+L VRG VM+G
Sbjct: 381 GMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGKMVMKG 429
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K P T QA +DG+L TGD G G L + R K+ + S G+ +
Sbjct: 430 YYKKPEETAQAFTKDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYI 479
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I QI +I ++ A+IVP + + AK+++I + D EL K
Sbjct: 480 APQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQINIKYHDRLELLKNS 539
Query: 429 TISLLYGE 436
I ++ +
Sbjct: 540 DILKMFEQ 547
>gi|170741077|ref|YP_001769732.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
gi|168195351|gb|ACA17298.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
Length = 612
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 168/358 (46%), Gaps = 49/358 (13%)
Query: 61 RSLYDIVPAENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPH 118
+++ D P + D FLS LP HV+ER G Y G +++ +V +L DDL+ +P
Sbjct: 220 QAVLDRNPGSDRDVFLSYLPLAHVFERVVGCYLPLILGARVVFARSVEHLPDDLRVARPT 279
Query: 119 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 178
++ VP + + L ++ T AAR R L+R + A R ++ F R+ +
Sbjct: 280 ILLVVPSLLDRL-----RRTVTERAARTAPTRWLLRAALA-----RGWDLFAARRDGCRL 329
Query: 179 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 238
AR L L +A + + + + ++ VSGG LP F
Sbjct: 330 GL---------ARTAAGAL--LRAVAAAPIRRSLGGRLRLA---VSGGAPLPDETARFCL 375
Query: 239 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 298
+G+ + GYGLTE++ + + V GSVG P+ E++I D T E+L
Sbjct: 376 GLGLPLVEGYGLTEAASAVTGFQVGRTVPGSVGPPLPGMEVRIAD--TGEIL-------- 425
Query: 299 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 358
VR VM GY++ P T Q L GWL TGD+G + GG L + GR K+
Sbjct: 426 -VRSPGVMIGYWRRPDLTAQVL-HGGWLYTGDLGVLR-----------GGCLYVAGRKKE 472
Query: 359 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
IVLSTGE V P +E A R L RQ + +G+ Q R + V D+ A+RL +
Sbjct: 473 MIVLSTGEKVSPEAVEAAITRDPLFRQAMAVGEGQSRLTVLAVVDEAAWAPLARRLGL 530
>gi|424039094|ref|ZP_17777540.1| AMP-binding enzyme family protein, partial [Vibrio cholerae
HENC-02]
gi|408893373|gb|EKM30590.1| AMP-binding enzyme family protein, partial [Vibrio cholerae
HENC-02]
Length = 525
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 165/350 (47%), Gaps = 47/350 (13%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+++ + + A C N+K PS +
Sbjct: 280 SAIHEKVSRAPFHRKIMFTWAVNMGAKMAA--------CHQENRK-PSLM---------- 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 420
+E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 475 QVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHD 524
>gi|351728737|ref|ZP_08946428.1| AMP-dependent synthetase and ligase [Acidovorax radicis N35]
Length = 628
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 187/408 (45%), Gaps = 44/408 (10%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 116
++++ D + D FLS LP H +ER GY++ + G + Y +V L +DL+ +
Sbjct: 228 DVKAVLDRIAPTVDDVFLSFLPLSHTFERTGGYYLPIAAGSCVAYARSVPQLAEDLKTVR 287
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
P ++SVP +YE +++ + +++ + ++ A R + FC +
Sbjct: 288 PTVLVSVPRIYERIHAKLLEKLSPTP----------WKMQLYEAAQHRGWARFCTMQGLP 337
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 235
P A D A + A+ WP+ + LV K + + G + VSGG L I
Sbjct: 338 AP----AAEDGRAAGWMAALPWPV---LQALVAKPLLAQFGGRVRVAVSGGAPLSPTIAK 390
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
+ +G+ + GYG+TE++PV++ N VG + +++I G
Sbjct: 391 CFLGLGLPLIQGYGMTETAPVVSVNSLDDNDPACVGKALPGVDVRI-----------GEN 439
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
++VRG VM+GY+K P T + L DGWL TGD ++ G + ++GR
Sbjct: 440 RELQVRGPIVMKGYWKRPEDTAKILSPDGWLGTGD-----------QAELVNGRIYIKGR 488
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K+ IV STGE + P +LE A L L+ Q V+G+++ + V + E A L
Sbjct: 489 IKEIIVTSTGEKIPPGDLELALLADPLLEQAFVVGENRPFIACVAVLNAGEWQRLAADLG 548
Query: 416 IVHADASELSKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 461
+ D L+ + + K T+ + P +H+ +P+T+
Sbjct: 549 LSAQDTDSLNHPSVHRAVLARIEKNTASFARYAVPRAVHLTLDPWTIE 596
>gi|451965692|ref|ZP_21918949.1| putative long-chain fatty-acid--CoA ligase [Edwardsiella tarda NBRC
105688]
gi|451315494|dbj|GAC64311.1| putative long-chain fatty-acid--CoA ligase [Edwardsiella tarda NBRC
105688]
Length = 600
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 171/370 (46%), Gaps = 48/370 (12%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYET 129
+ D L LP HV+ERA +++ G + +Y NL ++ +Q +P M +VP YE
Sbjct: 220 DQDVSLCFLPLSHVFERAWSFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPRFYEK 279
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
++S +Q ++ + RR + R + F R G
Sbjct: 280 IFSAVQAKVAQAPWLRRQLFRWAVWC--GEQRFLRERAG--------------------- 316
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 248
R + ++ +H A++LV K++ +G + + G L + LF++A+G+ ++ GY
Sbjct: 317 -RPLSGMMAAMHRAADRLVLGKLRDILGGRVRFLPAAGAKLDDQVILFFQALGLNIKYGY 375
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
G+TE+ ++ GS+G P+ E++I AE NE+ +VRG VM+G
Sbjct: 376 GMTETCATVSCWEEHDFRFGSIGRPLPGIEVRI--AEENEI---------QVRGPIVMRG 424
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
YF P T Q+ DGWL TGD G + G L + R KD + S G+ +
Sbjct: 425 YFNKPQETAQSFTADGWLKTGDAGALDAQ----------GNLFITERLKDLMKTSNGKYI 474
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E R I Q+ VI ++ A+IVP + + A+ +++ + D +L +
Sbjct: 475 APQLVEGTLARDRFIEQVAVIADARKFVSALIVPCFDALEEYARSINLKYHDRLDLLRHS 534
Query: 429 TISLLYGELR 438
I ++ ELR
Sbjct: 535 HIVEMF-ELR 543
>gi|348171460|ref|ZP_08878354.1| putative long-chain fatty acid ligase [Saccharopolyspora spinosa
NRRL 18395]
Length = 592
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 164/336 (48%), Gaps = 51/336 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G+ L LP HV RA + L +T+ V++L DL ++P ++++VP V+E +
Sbjct: 217 GNSMLMFLPMAHVLARAITVMCVYGRVTLGHTSDVKDLVTDLSSFRPTFVLAVPRVFEKV 276
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +++ S R + I+ AY+ + + +G
Sbjct: 277 YNTAKQKAHGSGKGR--IFDLAEDIAVAYS--RAVDDGG--------------------- 311
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
+ L H L +KLVY K+++A+G A VSGG L + F+ +GV V GYG
Sbjct: 312 --VGLGLKLKHTLFDKLVYGKLRAALGGRCIAAVSGGAPLGERLAHFFRGVGVPVLEGYG 369
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE++ A + +G+VG P+ T ++I AE EVL ++G V + Y
Sbjct: 370 LTETTAAAAVNVESAFKVGTVGKPVAGTSVRI--AEDGEVL---------IKGDVVFREY 418
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ NP ATK++L EDGW +TGD+G + G L + GR K+ IV + G+NV
Sbjct: 419 WNNPLATKESL-EDGWFHTGDLGSLDDE----------GFLKITGRKKEIIVTAGGKNVA 467
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+A LI Q +V+G + GA+I D E
Sbjct: 468 PAVLEDALRAHPLISQCMVVGDQKPFIGALITLDPE 503
>gi|377557789|ref|ZP_09787421.1| long-chain fatty-acid--CoA ligase FadD [Gordonia otitidis NBRC
100426]
gi|377525041|dbj|GAB32586.1| long-chain fatty-acid--CoA ligase FadD [Gordonia otitidis NBRC
100426]
Length = 609
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 180/400 (45%), Gaps = 59/400 (14%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYE 128
E G+ L LP HV+ R G+ + +T+ + NL + L ++P+Y++SVP V+E
Sbjct: 233 EEGNSTLLFLPLAHVFARVIAVASLESGVIVGHTSDIPNLVEHLGTFKPNYVLSVPRVFE 292
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+ +++ + A I ++ A ++ G L
Sbjct: 293 KVYNSAKQKAYDGGKGSIFDKAADTAIEYS-EALEKGGPGIALKLK-------------- 337
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVG 247
H + + LVYKK+++A+G + G +SGG L + F+ GV V G
Sbjct: 338 ------------HAVFDALVYKKLRAALGGNCDGAISGGAPLGARLGHFFRGAGVPVYEG 385
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGL+E++ I A +GSVG PI I I D E EVL V+G V
Sbjct: 386 YGLSETTAAITANNEEHQRVGSVGRPIPGVSIAIAD-EDGEVL---------VKGPVVFT 435
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
Y+ NP AT A+ DGW +TGD+G + G L + GR K+ IV + G+N
Sbjct: 436 EYWHNPEATADAI-RDGWFHTGDVGNLDD-----------GFLYITGRKKELIVTAGGKN 483
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
V P +LE++ +I Q +V+G ++ A+I D E V +R + A + LS
Sbjct: 484 VSPAQLEDSIRAHPMISQCLVVGDNKPFIAALITIDAESVPGWLERNGL--ASDTSLSDL 541
Query: 428 KTISLLYGELRKWTSKCSFQIGPIH------VVDEPFTVN 461
T L E+ + + ++ ++D FT++
Sbjct: 542 ATNEKLRAEIAEAVDAANAKVSKAEAIKKFSILDTDFTID 581
>gi|441509794|ref|ZP_20991707.1| long-chain fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
gi|441446069|dbj|GAC49668.1| long-chain fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
Length = 604
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 158/336 (47%), Gaps = 51/336 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G + L LP HV A G+E+ +T +N+ +++P ++SVP V+E +
Sbjct: 229 GKRLLMFLPLAHVLAHAITLVAIEAGVEVGFTGDTKNIVTTFGQFKPSLILSVPRVFEKV 288
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
++ ++ + A + I ++ K+ EG
Sbjct: 289 FNSARQSAADGGKGKIFDAASATAIEYS----KKSEEGS--------------------- 323
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
+ +L H + ++LVY K+++A+G + +SGG L + F+ IG+ V GYG
Sbjct: 324 --VPLLLKVKHAVFDRLVYSKLRAALGGRCELAISGGAPLGAMLGHFFNGIGIPVYEGYG 381
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE++ + P + +G+VG P+ ++I AE EV+ V G V GY
Sbjct: 382 LTETTAAFSVNTPGESKIGTVGKPVAGNTVRI--AEDGEVM---------VTGGVVFHGY 430
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ NP AT+QAL EDGW +TGD+G I G + + GR K+ IV + G+NV
Sbjct: 431 WNNPDATQQAL-EDGWFHTGDLGNI----------DSDGFISITGRKKELIVTAGGKNVS 479
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+ ++L+ Q VV+G + A+I D E
Sbjct: 480 PSGLEDVLRSAALVSQAVVVGDQKPFISALITIDPE 515
>gi|68535669|ref|YP_250374.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
gi|68263268|emb|CAI36756.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
Length = 612
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 157/336 (46%), Gaps = 47/336 (13%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 130
G + L+ LP HV+ RA + G + ++ + L + QR +P+ + SVP ++E +
Sbjct: 232 GYRKLTFLPLAHVFSRAMAHAATVGGATQTHWSDMSTLVAEFQRTKPNLICSVPRIFEKV 291
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
++G++ + + + R + Y+ EG L + ID
Sbjct: 292 HAGVKSKATDGGGVKAKIFNFAERAAVDYSKALDTDEGPSLKQK----------ID---- 337
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
+ +KLVY K++ A+G +SGG +L + F+ +GV + GYG
Sbjct: 338 ----------RAIGDKLVYSKVREAMGGELDYAISGGSALNPELMHFFRGVGVNLYEGYG 387
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE + N++G+VG P+ +KI D G + ++G V GY
Sbjct: 388 LTECTAAACTNFAPDNIIGTVGRPLGGITVKIAD-----------DGEILLKGDMVFAGY 436
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
++N AT ++ EDG+ TGD+G + P G L + GR K+ IV + G+NV
Sbjct: 437 WENEEATAESFTEDGFYRTGDLGKLLPT----------GHLKITGRKKEIIVTAGGKNVS 486
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P +E+ + LI Q +V+G DQ+ GA+I D+E
Sbjct: 487 PGPMEDILRSAPLISQAMVVGDDQKFVGALISLDEE 522
>gi|424851481|ref|ZP_18275878.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356666146|gb|EHI46217.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 595
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 166/359 (46%), Gaps = 54/359 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G + L LP HV+ RA + F + + +TA + L D ++PH+++SVP V+E +
Sbjct: 221 GRRTLMFLPLAHVFARAISFGAFDAKVTVAHTADLTTLLDQFAAFKPHFILSVPRVFEKV 280
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +A ++ Y+G + +K + +A +
Sbjct: 281 YN---------------------------SAKQKAYDGGKGSIFEKASATAIAYSEAQDN 313
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
L H L +KLVY K+++A+G VSGG +L + F+ IGV V GYG
Sbjct: 314 GGAGLGLKLKHALFDKLVYSKLRTALGGECDRAVSGGAALGARLGHFFRGIGVPVYEGYG 373
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+S I+ +G+VG PI+ KI G G + ++G V GY
Sbjct: 374 LTETSAAISVNTTRAQKVGTVGKPIDGHAAKI-----------GEDGELLLKGPVVFGGY 422
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ N AT ++ DGW +TGD+G I G + + GR K+ IV + G+NV
Sbjct: 423 WHNEQATADSI-RDGWFHTGDLGSIDEE----------GYISITGRKKEIIVTAGGKNVA 471
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA--SELSK 426
P LE+A LI Q +V+G + GA+I D E L K + ADA SEL K
Sbjct: 472 PAVLEDALRAHPLISQCLVVGDGKPFIGALITLDS-ETLPGWKERHGLAADAPVSELVK 529
>gi|423208221|ref|ZP_17194775.1| hypothetical protein HMPREF1169_00293 [Aeromonas veronii AER397]
gi|404619268|gb|EKB16184.1| hypothetical protein HMPREF1169_00293 [Aeromonas veronii AER397]
Length = 596
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 179/388 (46%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L MLP HV+ERA Y++ G E +Y + + D + QP M +VP +YE Y
Sbjct: 218 DVSLCMLPLSHVFERAWSYYVLYCGAENVYIRDPQKVMDVIGEVQPTVMCAVPRLYEKAY 277
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
+ IQ ++ + A RR + F + ++ + TR Q S L LW
Sbjct: 278 AMIQAKVAQAPALRRAL--------FGWAT--KVGKQMVATR-QAGKSASPLLYGQLW-- 324
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYGL 250
LAE+LV++K+++ G + G L ++LF++A+G+ ++ GYG+
Sbjct: 325 -----------LAERLVFRKLRARFGGRTRFLPVAGARLADDVNLFFQAMGLNLKYGYGM 373
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ + + LGS+G +N E+K+ E NE+L VR VM+GY+
Sbjct: 374 TETTATVCCYEDSQFKLGSIGTALNGIEVKL--GENNELL---------VRSPTVMRGYY 422
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P AT + + EDG+L TGD G + G + R K+ + S G+ V P
Sbjct: 423 NKPDATAEVMTEDGFLRTGDAGELDSQ----------GNIYFTERLKELMKTSNGKYVAP 472
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E + I QI ++ + A+IVP E + A+ +++ + +EL +
Sbjct: 473 QLVEGTIGKDRFIEQIAIVADARHFVSALIVPCFESLEEYARSINLQYQCKTELLRHSRV 532
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
E I+ L EL K+ F + P
Sbjct: 533 MEFFEARIADLQKELAKFEQVKKFTLLP 560
>gi|198274325|ref|ZP_03206857.1| hypothetical protein BACPLE_00469 [Bacteroides plebeius DSM 17135]
gi|198272815|gb|EDY97084.1| AMP-binding enzyme [Bacteroides plebeius DSM 17135]
Length = 604
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 179/396 (45%), Gaps = 53/396 (13%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETL 130
D ++ LP H++ERA Y+ +G L + ++++ ++ +P M SVP +E +
Sbjct: 222 NDVVMNFLPFTHIFERAWSYYCLYKGCMLCINLRPQDIQKTIKEVRPTAMCSVPRFWEKV 281
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+G+Q++I ++ ++ + +R+ + N K P L+ +
Sbjct: 282 YAGVQEKINETTGLKKSLMLDALRVGREHN--------ITYLMNGKTPPSLLHM------ 327
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGY 248
+ EK +Y ++ IGI + G ++P + F ++G+ + GY
Sbjct: 328 ---------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAIPEKVAEFVHSVGINMIAGY 378
Query: 249 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 308
GLTES+ ++ LG+VG ++ E++I E NE+ ++RG + +G
Sbjct: 379 GLTESTATVSCEWIGDFRLGAVGRVLDGVEVRI--GENNEI---------QLRGGTITKG 427
Query: 309 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 368
Y+K + T+QA EDGW TGD G++ G L L R KD S G+ +
Sbjct: 428 YYKKEAITQQAFTEDGWFRTGDAGYMKD-----------GFLYLTDRIKDLFKTSNGKYI 476
Query: 369 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 428
P +E + I Q+ +I ++ A+IVP+ +V A+ I EL +
Sbjct: 477 APQAIETKLVVDRYIDQVTIIADQRKFVSALIVPEYSQVEKFAQEHHIAFGSRKELLENP 536
Query: 429 TISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 460
I L+ LR T + F Q+ ++ EPF++
Sbjct: 537 QIIELF-RLRIDTLQQEFAHYEQVKRFTLLPEPFSM 571
>gi|293189663|ref|ZP_06608380.1| putative CoA ligase [Actinomyces odontolyticus F0309]
gi|292821401|gb|EFF80343.1| putative CoA ligase [Actinomyces odontolyticus F0309]
Length = 627
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 164/369 (44%), Gaps = 64/369 (17%)
Query: 39 FSFVLIDLNTWMPIPKMTNFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRG 97
F+ + ++ + WMP + A + L LP HV+ R F I G
Sbjct: 229 FTNLCLNAHAWMPE--------------IAAGKDSRLLLFLPLAHVFARFLQVFQISGNG 274
Query: 98 IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 157
+ + ++NL +DL ++P Y++ VP V E +Y+ + +S +R + R +++
Sbjct: 275 VLGHASNIKNLLNDLASFKPSYLLVVPRVLEKIYNSADTK---ASGPKRKIFRWAAKVAI 331
Query: 158 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 217
AY+ EG PS A L H LA++LVY++I +G
Sbjct: 332 AYSRALDTEEG---------PS---------------ASLKAQHALADRLVYQQIIRLVG 367
Query: 218 ISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 276
+ VSGG L + FY +G+ V GYGLTE+ ++ P + +G+VG +
Sbjct: 368 GNADYIVSGGAPLATWLAHFYRGVGIPVLEGYGLTETVGPVSVNTPRLSKIGTVGPALPP 427
Query: 277 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 336
KI D +G + ++G V Q Y +P AT EDGW TGD+G
Sbjct: 428 MSFKISD-----------EGEILLKGPSVFQRYHNDPGATAACFTEDGWFRTGDLG---- 472
Query: 337 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 396
S G + + GRAK+ IV + G+NV P LE LI Q++V+G +
Sbjct: 473 ------SLDRDGYVSITGRAKEIIVTAGGKNVAPAALENPMRSHPLISQVLVVGDQRPFV 526
Query: 397 GAIIVPDKE 405
A+I D E
Sbjct: 527 AALITLDAE 535
>gi|254508749|ref|ZP_05120862.1| long-chain acyl-CoA synthetase [Vibrio parahaemolyticus 16]
gi|219548328|gb|EED25340.1| long-chain acyl-CoA synthetase [Vibrio parahaemolyticus 16]
Length = 602
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 175/388 (45%), Gaps = 55/388 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIF 279
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S I +++ + R+V+ F + C +K PS
Sbjct: 280 SAIHEKVAKAPFIRKVM--------FTWAVNMGAKMAVCHQEGRK-PSL----------- 319
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 320 ----ALKKAYKLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ I+ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATISCWDDQCFNPDSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
K P T + DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 425 KMPEETAKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSNGKYIAP 474
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMVEGTIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQI 534
Query: 427 ----EKTISLLYGELRKWTSKCSFQIGP 450
E+ ++ L EL K+ F++ P
Sbjct: 535 VEMLEQRVNDLQKELAKFEQVKKFKLLP 562
>gi|315655304|ref|ZP_07908204.1| long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii ATCC 51333]
gi|315490244|gb|EFU79869.1| long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii ATCC 51333]
Length = 612
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 158/342 (46%), Gaps = 63/342 (18%)
Query: 74 KFLSMLPPWHVYERACGYFIFS-RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
+ L LP HV+ R Y + S RG+ V+N+ +DLQ ++P MI VP V E +Y+
Sbjct: 236 RLLLFLPLAHVFARFSSYTVLSGRGVLGCVPNVKNMLNDLQSFRPTSMIVVPRVLEKIYT 295
Query: 133 --------GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
G++ IF +AA+ I S A R + GF L R++
Sbjct: 296 AAQVKSGRGLKHSIFNWAAAQ------AIHYSEALNDPNRKFVGFRLHRSRA-------- 341
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
+A+KL++ K+ +G + +SGG L + F+ +G+
Sbjct: 342 ------------------IADKLLFSKLLDLMGGECRWVISGGAPLGARLGHFFRGVGLT 383
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
V G+GLTE++ P +G+VG P+ E+KI + G + VR
Sbjct: 384 VIEGWGLTETAGPATGNLPGNIRIGTVGRPLPGVELKI-----------DASGEIFVRSR 432
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM+GY NP AT + LD DGW +GD+G I G L + GR K+ IV +
Sbjct: 433 IVMRGYRNNPEATGEVLDSDGWFASGDLGEIDDD----------GYLSITGRKKELIVTA 482
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+G+NV P LE++ L+ +VVIG + A++ D+E
Sbjct: 483 SGKNVSPAPLEDSFRGHPLVSNVVVIGDKRPFVSALVTLDRE 524
>gi|441510377|ref|ZP_20992284.1| long-chain fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
gi|441445512|dbj|GAC50245.1| long-chain fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
Length = 595
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 183/400 (45%), Gaps = 59/400 (14%)
Query: 70 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYE 128
E G+ L LP HV+ R G+ + +T+ + +L + L ++P+Y++SVP V+E
Sbjct: 219 EEGNSTLLFLPLAHVFARVIAVASLESGVIVGHTSDIPHLVEHLATFKPNYVLSVPRVFE 278
Query: 129 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 188
+Y+ +++ + + I A TA + + Q P + L
Sbjct: 279 KVYNSAKQKAYDG-------GKGSIFDKAADTAIE-----YSEALEQGGPGIALRL---- 322
Query: 189 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVG 247
H + + LVYKK+++A+G + G +SGG L + F+ GV V G
Sbjct: 323 -----------KHAVFDALVYKKLRAALGGNCDGAISGGAPLGARLGHFFRGAGVPVYEG 371
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGL+E++ I A +GSVG PI I I D E EVL V+G V
Sbjct: 372 YGLSETTAAITANSEEHQRVGSVGRPIPGVSIAIAD-EDGEVL---------VKGPVVFT 421
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
Y+ NP AT A+ DGW +TGD+G + G L + GR K+ IV + G+N
Sbjct: 422 EYWHNPGATADAI-RDGWFHTGDVGHLED-----------GFLYITGRKKELIVTAGGKN 469
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
V P +LE++ +I Q +V+G ++ A+I D E V +R + A + LS
Sbjct: 470 VSPAQLEDSIRAHPMISQCLVVGDNKPFIAALITIDTESVPGWLERNGL--ASDTSLSDL 527
Query: 428 KTISLLYGELRKWTSKCSFQ------IGPIHVVDEPFTVN 461
T L E+ + + + I +++D FT++
Sbjct: 528 ATNEKLRAEIAEAVDAANAKVSKAEAIKKFNILDTDFTID 567
>gi|260578257|ref|ZP_05846173.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
gi|258603559|gb|EEW16820.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
Length = 618
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 161/344 (46%), Gaps = 51/344 (14%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 130
G + L+ LP HV+ RA + G + ++ + L + QR +P+ + SVP ++E +
Sbjct: 238 GYRKLTFLPLAHVFSRAMAHAATVGGATQTHWSDMSTLVAEFQRTKPNLICSVPRIFEKV 297
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
++G++ + + + R + Y+ EG L + ID
Sbjct: 298 HAGVKAKATDGGGVKAKIFNFAERAAVDYSKALDTDEGPSLKQK----------ID---- 343
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
+ +KLVY K++ A+G +SGG +L + F+ +GV + GYG
Sbjct: 344 ----------RAIGDKLVYSKVREAMGGELDYAISGGSALNPELMHFFRGVGVNLYEGYG 393
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE + N++G+VG P+ +KI D G + ++G V GY
Sbjct: 394 LTECTAAACTNFAPDNIIGTVGRPLGGITVKIAD-----------DGEILLKGDMVFAGY 442
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
++N AT ++ EDG+ TGD+G + P G L + GR K+ IV + G+NV
Sbjct: 443 WENEEATAESFTEDGFYRTGDLGKLLPT----------GHLKITGRKKEIIVTAGGKNVS 492
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 413
P +E+ + LI Q +V+G DQ+ GA+I D+E AAK+
Sbjct: 493 PGPMEDILRSAPLISQAMVVGDDQKFVGALISLDEE----AAKK 532
>gi|397736417|ref|ZP_10503099.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396927607|gb|EJI94834.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 595
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 156/336 (46%), Gaps = 51/336 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G + L LP HV+ RA + F + + +TA + L D ++PH+++SVP V+E +
Sbjct: 221 GRRTLMFLPLAHVFARAISFGAFDAKVTVAHTADLTTLLDQFAAFKPHFILSVPRVFEKV 280
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +A ++ Y+G + +K + +A +
Sbjct: 281 YN---------------------------SAKQKAYDGGKGSIFEKASATAIAYSEAQDN 313
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
L H L +KLVY K+++A+G VSGG +L + F+ IGV V GYG
Sbjct: 314 GGAGLGLKLKHALFDKLVYSKLRTALGGECDRAVSGGAALGARLGHFFRGIGVPVYEGYG 373
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+S I+ +G+VG PI+ KI G G + ++G V GY
Sbjct: 374 LTETSAAISVNTTRAQKVGTVGKPIDGHAAKI-----------GEDGELLLKGPVVFGGY 422
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ N AT ++ DGW +TGD+G I G + + GR K+ IV + G+NV
Sbjct: 423 WHNEQATADSI-RDGWFHTGDLGSIDEE----------GYISITGRKKEIIVTAGGKNVA 471
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+A LI Q +V+G + GA+I D E
Sbjct: 472 PAVLEDALRAHPLISQCLVVGDGKPFIGALITLDSE 507
>gi|424842397|ref|ZP_18267022.1| AMP-forming long-chain acyl-CoA synthetase [Saprospira grandis DSM
2844]
gi|395320595|gb|EJF53516.1| AMP-forming long-chain acyl-CoA synthetase [Saprospira grandis DSM
2844]
Length = 607
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 187/403 (46%), Gaps = 45/403 (11%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQP 117
+R + +P + D LS LP HV+ER Y ++G ++ Y + L + LQ +P
Sbjct: 208 NVRDVLPFIPLQPQDIALSFLPICHVFERTVTYSYMAKGAQVFYAKDLDTLSETLQDIRP 267
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
H+ +VP + E +Y + ++ + + + ++ Y
Sbjct: 268 HFFTTVPRLLEKVYEKMMLKVQAEGGLKEKIFNWALGLTEKYD----------------- 310
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLF 236
DW A + AI W + A+KLV+ K++ +G G V+G + P +
Sbjct: 311 -------FDWQ-AAGLEAIKWKI---ADKLVFSKVRERLGGRLKGIVTGAAACPPRMTQL 359
Query: 237 YEAIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 294
+ A+GV ++ GYGLTE+SP I+ P ++GSVG + ++KI ++ +
Sbjct: 360 FSAVGVPIREGYGLTETSPAISINIFEPYQAMIGSVGPILPSVQVKIDQDDSY----GPN 415
Query: 295 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 354
+G V V+G+ VM GY++ T + +++GW TGDIG I +++ L +
Sbjct: 416 EGEVLVKGNSVMMGYYRKEDKTAEVFNDEGWFLTGDIGKIV------ENKKGIKFLKITD 469
Query: 355 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 414
R K+ + S G+ V P +E L+ Q++V+G+ ++ A+I P+ E + +
Sbjct: 470 RKKELLKTSGGKYVAPTPIESTLKEDLLVEQVMVVGEKRKFVSALIQPNFESLKNWCQDK 529
Query: 415 SIVHADASE-LSKEKTISLLYGELRKWTSKCSF--QIGPIHVV 454
+I + E ++ K ++ + ++ + S QI H+V
Sbjct: 530 NIAWSKPEEVITNPKVLAYFQAVINRYNPRFSKVEQIKKFHLV 572
>gi|416893219|ref|ZP_11924505.1| long chain fatty acid CoA ligase [Aggregatibacter aphrophilus ATCC
33389]
gi|347814247|gb|EGY30897.1| long chain fatty acid CoA ligase [Aggregatibacter aphrophilus ATCC
33389]
Length = 578
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 189/431 (43%), Gaps = 66/431 (15%)
Query: 38 LFSFVLIDLNTWMPIPKMTNF-----QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 92
LF+ + T P M ++ Q+++ + ++ D LS LP H++ERA +
Sbjct: 162 LFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQALKVDDSDVSLSFLPLSHIFERAWVAY 221
Query: 93 IFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV--- 148
+ RG Y N ++ L +P M +VP YE +Y+ I ++ + R+ +
Sbjct: 222 VLHRGATNCYIEDTNQVRSALTEIRPTLMCAVPRFYEKIYTAILDKVHNAPQLRQWIFHW 281
Query: 149 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 208
A A+ R F L++ QK I +L + LA KLV
Sbjct: 282 AMAIGRQHFD-----------ILSKGQK----------------IGFLLKQQYALANKLV 314
Query: 209 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 267
K+++ +G + GG L I LF+ +IG+ +++GYG+TE++ ++
Sbjct: 315 LGKLRALLGGRIRMMPCGGAKLEPTIGLFFHSIGLNIKLGYGMTETTATVSCWDDVNFNA 374
Query: 268 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 327
S+G + E+KI E NE+L VRG VM+GY+K P T +A DG+L
Sbjct: 375 NSIGSLMPGAEVKI--GENNEIL---------VRGGMVMKGYYKKPQETAEAFTADGFLK 423
Query: 328 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 387
TGD G G L + R K+ + S G+ + P LE + I QI
Sbjct: 424 TGDAG----------EFDANGNLYITDRIKELMKTSNGKYIAPQVLESKIGKDKFIEQIA 473
Query: 388 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRK 439
VI ++ A+IVP + AK+++I + D EL K E+ I+ L EL
Sbjct: 474 VIADAKKYVSALIVPCYTALEEYAKQVNIKYQDRLELLKNSEIIQMLERRINDLQKELAG 533
Query: 440 WTSKCSFQIGP 450
W F + P
Sbjct: 534 WEQIKRFTLLP 544
>gi|310779949|ref|YP_003968281.1| AMP-dependent synthetase and ligase [Ilyobacter polytropus DSM
2926]
gi|309749272|gb|ADO83933.1| AMP-dependent synthetase and ligase [Ilyobacter polytropus DSM
2926]
Length = 827
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 159/361 (44%), Gaps = 74/361 (20%)
Query: 55 MTNFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRG---IELMYTAVRNLKD 110
M+N +L I + D+FL++LP HV+ F F G + L + +++
Sbjct: 165 MSNLD--ALKKIKLYDENDRFLALLPYHHVFPLVINLFAPFHNGSMVVMLDEISSETIRE 222
Query: 111 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 170
LQ+Y+ MI VP ++E L+ GI +I +S AA + R +I F
Sbjct: 223 ALQKYKITIMIGVPRLWELLHKGIMNKINSSKAALYLF-RTCEKIKF------------- 268
Query: 171 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 229
+WL +I +KK+ A G S + SGG L
Sbjct: 269 ---------------EWLRKKI----------------FKKVHDAFGGSMRIMASGGAKL 297
Query: 230 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 289
I +G K+ GYGLTE+SP+I P +GS G PI E+KI D
Sbjct: 298 DPDIMKNLTTLGFKMLEGYGLTETSPIITFNNPDDARMGSAGVPIPGVEVKISD------ 351
Query: 290 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 349
G V RG VM+GY P T Q +D DGW +TGD+G + H
Sbjct: 352 -----DGEVLARGLNVMKGYLNRPETTSQVIDSDGWFHTGDLGELRDGH----------- 395
Query: 350 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 409
L L GR K+ IVLS G+N+ P ++E ++ + + + + + + + AI+ PD E +
Sbjct: 396 LYLIGRKKEMIVLSNGKNINPADIEIEIMKDAKLIKEMAVTEYNKHLVAIVYPDFEAIKE 455
Query: 410 A 410
A
Sbjct: 456 A 456
>gi|423343693|ref|ZP_17321406.1| hypothetical protein HMPREF1077_02836 [Parabacteroides johnsonii
CL02T12C29]
gi|409214715|gb|EKN07724.1| hypothetical protein HMPREF1077_02836 [Parabacteroides johnsonii
CL02T12C29]
Length = 634
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 187/377 (49%), Gaps = 49/377 (12%)
Query: 76 LSMLPPWHVYERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLV 126
L +LP H + G++IF S+G +++ T + LK+ +++ ++P+ ++SVP +
Sbjct: 222 LVILPLDHCFAHVVGFYIFMSKGASVATVQVGRTGLETLKNIPVNIKEFKPYLILSVPAL 281
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
+ I++ I R + + R+ IY G + +L
Sbjct: 282 AKNFKKNIEQGI-------RAQGKHVTRLFNFALKVAYIYNGDGGEDKGRGTRFL----- 329
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 245
L PL L +++++ K++ G K + GG L + FY AIG+ +
Sbjct: 330 ----------LKPLVSLFDRVLFTKVRENFGGQLKFFIGGGALLDKDLQKFYYAIGLPMY 379
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGL+E++PVI+ P + GS G + ++KI DA+ E LP G KG + +RG V
Sbjct: 380 QGYGLSEATPVISTNGPHRHTFGSSGVLVRPLDLKICDADGKE-LPTGEKGEIVIRGENV 438
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
M GY+KNP +T + + + WL TGD+G++ H G+L + GR K ++ S G
Sbjct: 439 MAGYWKNPVSTAETV-RNRWLYTGDMGYMG--HD--------GLLYVLGRFKSLLIGSDG 487
Query: 366 ENVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASE 423
E P +EEA + SS I Q+++ A++VP+K+ + K L+ H D +S+
Sbjct: 488 EKYSPEGIEEALVEHSSCIDQLILYNNQSPYTVALVVPNKDRL---KKHLAHQHLDLSSD 544
Query: 424 LSKEKTISLLYGELRKW 440
+E+ I ++ ++ ++
Sbjct: 545 KGREEAIRIIQSQIDRF 561
>gi|405980028|ref|ZP_11038369.1| hypothetical protein HMPREF9241_01092 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391403|gb|EJZ86467.1| hypothetical protein HMPREF9241_01092 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 627
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 164/369 (44%), Gaps = 64/369 (17%)
Query: 39 FSFVLIDLNTWMPIPKMTNFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRG 97
F+ + ++ ++WMP + A + L LP HV+ R F I G
Sbjct: 229 FTNLCLNAHSWMPE--------------IAAGKDSRLLLFLPLAHVFARFLQVFQISGNG 274
Query: 98 IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 157
+ + ++NL +DL ++P Y++ VP V E +Y+ + +S +R + R +I+
Sbjct: 275 VLGHASNIKNLLNDLASFKPSYLLVVPRVLEKIYNSADTK---ASGPKRKIFRWAAKIAI 331
Query: 158 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 217
AY+ EG PS A L H LA KLVY++I +G
Sbjct: 332 AYSRALDTEEG---------PS---------------ASLKAQHALANKLVYQQIIRLVG 367
Query: 218 ISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 276
+ VSGG L + FY +G+ V GYGLTE+ ++ P + +G+VG +
Sbjct: 368 GNADYIVSGGAPLATWLAHFYRGVGIPVLEGYGLTETVGPVSVNTPHLSKIGTVGPALPP 427
Query: 277 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 336
KI D +G + ++G + Q Y +P AT EDGW TGD+G
Sbjct: 428 MSFKISD-----------EGEILLKGPSIFQYYHNDPEATTACFTEDGWFRTGDLG---- 472
Query: 337 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 396
S G + + GRAK+ IV + G+NV P LE LI Q++V+G +
Sbjct: 473 ------SLDRDGYVSITGRAKEIIVTAGGKNVAPAVLENPMRSHPLISQVLVVGDQRPFI 526
Query: 397 GAIIVPDKE 405
A+I D E
Sbjct: 527 AALITLDAE 535
>gi|441515067|ref|ZP_20996876.1| long-chain fatty-acid--CoA ligase FadD [Gordonia amicalis NBRC
100051]
gi|441450161|dbj|GAC54837.1| long-chain fatty-acid--CoA ligase FadD [Gordonia amicalis NBRC
100051]
Length = 595
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 156/338 (46%), Gaps = 52/338 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G L LP HV R G+ L +T + NL +D ++PHY++SVP V+E +
Sbjct: 222 GKTTLLFLPLAHVLARVIAVASVENGVILGHTNDITNLVNDFAAFKPHYVLSVPRVFEKV 281
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +A ++ Y+G + +K + + A
Sbjct: 282 YN---------------------------SAKQKAYDGGKGSIFEKATDTAIEYSTAMEA 314
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYG 249
I L H L +KLVY K+++A+G G +SGG L + F+ +G+ V GYG
Sbjct: 315 GKIGLGLKLRHALFDKLVYGKLRAALGGQCEGAISGGAPLGARLGHFFRGVGIPVYEGYG 374
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
L+E++ + A +GSVG P+ I I D G + ++G V GY
Sbjct: 375 LSETTAAVTANNEENQKVGSVGRPVPGVTIAIAD-----------DGEILLKGPVVFGGY 423
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
++N +AT A+ DGW +TGDIG + G L + GR K+ IV + G+NV
Sbjct: 424 WRNEAATADAI-RDGWFHTGDIGTLDD-----------GYLFITGRKKELIVTAGGKNVS 471
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 407
P +LE++ ++ Q +V+G ++ A+I D E V
Sbjct: 472 PAQLEDSIRAHPMVSQCLVVGDNKPFIAALITIDPEAV 509
>gi|154509322|ref|ZP_02044964.1| hypothetical protein ACTODO_01847 [Actinomyces odontolyticus ATCC
17982]
gi|153798956|gb|EDN81376.1| AMP-binding enzyme [Actinomyces odontolyticus ATCC 17982]
Length = 627
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 164/369 (44%), Gaps = 64/369 (17%)
Query: 39 FSFVLIDLNTWMPIPKMTNFQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRG 97
F+ + ++ + WMP + A + L LP HV+ R F I G
Sbjct: 229 FTNLCLNAHAWMPE--------------IAAGKDSRLLLFLPLAHVFARFLQVFQISGNG 274
Query: 98 IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 157
+ + ++NL +DL ++P Y++ VP V E +Y+ + +S +R + R +++
Sbjct: 275 VLGHASNIKNLLNDLASFKPSYLLVVPRVLEKIYNSADTK---ASGPKRKIFRWAAKVAI 331
Query: 158 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 217
AY+ EG PS A L H LA++LVY++I +G
Sbjct: 332 AYSRALDTDEG---------PS---------------ASLKAQHALADRLVYQQIIRLVG 367
Query: 218 ISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 276
+ VSGG L + FY +G+ V GYGLTE+ ++ P + +G+VG +
Sbjct: 368 GNADYIVSGGAPLATWLAHFYRGVGIPVLEGYGLTETVGPVSVNTPRLSKIGTVGPALPP 427
Query: 277 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 336
KI D +G + ++G V Q Y +P AT EDGW TGD+G
Sbjct: 428 MSFKISD-----------QGEILLKGPSVFQRYHNDPGATAACFTEDGWFRTGDLG---- 472
Query: 337 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 396
S G + + GRAK+ IV + G+NV P LE LI Q++V+G +
Sbjct: 473 ------SLDRDGYVSITGRAKEIIVTAGGKNVAPAALENPMRSHPLISQVLVVGDQRPFV 526
Query: 397 GAIIVPDKE 405
A+I D E
Sbjct: 527 AALITLDAE 535
>gi|384100041|ref|ZP_10001108.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383842419|gb|EID81686.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 578
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 156/336 (46%), Gaps = 51/336 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G + L LP HV+ RA + F + + +TA + L D ++PH+++SVP V+E +
Sbjct: 204 GRRTLMFLPLAHVFARAISFGAFDAKVTVAHTADLTTLLDQFAAFKPHFILSVPRVFEKV 263
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +A ++ Y+G + +K + +A +
Sbjct: 264 YN---------------------------SAKQKAYDGGKGSIFEKASATAIAYSEAQDN 296
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
L H L +KLVY K+++A+G VSGG +L + F+ IGV V GYG
Sbjct: 297 GGAGLGLKLKHALFDKLVYSKLRTALGGECDRAVSGGAALGARLGHFFRGIGVPVYEGYG 356
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+S I+ +G+VG PI+ KI G G + ++G V GY
Sbjct: 357 LTETSAAISVNTTRAQKVGTVGKPIDGHAAKI-----------GEDGELLLKGPVVFGGY 405
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ N AT ++ DGW +TGD+G I G + + GR K+ IV + G+NV
Sbjct: 406 WHNEQATADSI-RDGWFHTGDLGSIDEE----------GYISITGRKKEIIVTAGGKNVA 454
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+A LI Q +V+G + GA+I D E
Sbjct: 455 PAVLEDALRAHPLISQCLVVGDGKPFIGALITLDSE 490
>gi|424861960|ref|ZP_18285906.1| long-chain fatty-acid-CoA ligase [Rhodococcus opacus PD630]
gi|356660432|gb|EHI40796.1| long-chain fatty-acid-CoA ligase [Rhodococcus opacus PD630]
Length = 599
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 160/340 (47%), Gaps = 49/340 (14%)
Query: 69 AENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVY 127
A G++ L+ LP HV RA +F G + ++ + + +R++P+ ++ VP V+
Sbjct: 218 ARPGNRVLTFLPLAHVLARAVSLAMFEAGATQAHWSDFGTVTGEFERFRPNTILGVPRVF 277
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E + G ++ ++ ++ + + AY+ ++ PS +
Sbjct: 278 EKVRDGAARKAASAGGLQKRIFDFAEATAVAYSE----------AQDAGGPSLRLRF--- 324
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQV 246
LA+KLVY K+++A+G +SGGG+L + F+ +GV V
Sbjct: 325 ------------ERALADKLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGMGVPVYE 372
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTES+ P +G+VG P+ ++I + G +++RG V
Sbjct: 373 GYGLTESTAAHCVNVPGVQKIGTVGQPLGGNGVRIAE-----------DGEIELRGGVVF 421
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY++N AT++ LD DGW TGD+G + G L + GR KD +V + G+
Sbjct: 422 GGYWRNEHATREVLD-DGWFRTGDLGDLDDE----------GYLTITGRKKDLLVTAGGK 470
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 406
NV P LE+ +L+ Q VV+G + GA++ D +E
Sbjct: 471 NVSPGPLEDRLRSHTLVSQAVVVGDGRPFVGALLTVDPQE 510
>gi|333921588|ref|YP_004495169.1| acyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483809|gb|AEF42369.1| Acyl-CoA synthetase, long-chain fatty acid:CoA ligase
[Amycolicicoccus subflavus DQS3-9A1]
Length = 603
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 158/333 (47%), Gaps = 52/333 (15%)
Query: 76 LSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLY-SG 133
L LP HV+ R + + L +TA VR+L DDL ++P ++++VP V+E +Y +
Sbjct: 232 LLFLPLAHVFARVIQLGCVYQRVTLGHTADVRDLLDDLAGFRPTFILAVPRVFEKVYNTA 291
Query: 134 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 193
+QK +A + + I+ Y+ + L ++
Sbjct: 292 VQK---ADAAGKGKIFNRAAAIAIQYS-------------------------EALDTGVV 323
Query: 194 CAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 252
L L LVY+K++ ++G + +SGG +L + FY IG+ V GYGLTE
Sbjct: 324 PVGLRTRRALYNALVYRKLRKSLGGRATHAISGGSALGSRLGHFYRGIGLTVLEGYGLTE 383
Query: 253 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 312
++ I P +G+VG P+ ++I D G V V+G V GY++N
Sbjct: 384 TTAAITVNPPRYAKMGTVGLPVPGAVVRIAD-----------DGEVLVQGPMVFGGYWRN 432
Query: 313 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 372
AT +A+D DGW +TGDIG + G L + GR K+ IV + G+NV P
Sbjct: 433 EDATGEAIDNDGWFHTGDIGTLDEQ----------GYLAITGRKKEIIVTAGGKNVAPAV 482
Query: 373 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
+E+ L+ Q++V+G ++ GA++ D E
Sbjct: 483 IEDRIRAHPLVSQVMVVGDNEPFIGALVTLDAE 515
>gi|325287445|ref|YP_004263235.1| long-chain-fatty-acid--CoA ligase [Cellulophaga lytica DSM 7489]
gi|324322899|gb|ADY30364.1| Long-chain-fatty-acid--CoA ligase [Cellulophaga lytica DSM 7489]
Length = 589
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 177/396 (44%), Gaps = 62/396 (15%)
Query: 67 VPAENG-DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPL 125
+P E G + LS LP HVYER Y G + Y + + + Q QP M +VP
Sbjct: 209 IPIELGKSRALSFLPLCHVYERMLIYLYQYCGAAIHYAPIDQISEYAQEVQPQVMTAVPR 268
Query: 126 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 185
+ E +Y I + + ++ + + + Y +++
Sbjct: 269 LLEKVYDKIIAKGTALTGIKKKLFFWAVEVGLEYKPYQQN-------------------- 308
Query: 186 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKV 244
W + + + LA KL++ K ++A+G A + SG +L + + A G V
Sbjct: 309 GWWYEKKLG--------LARKLIFSKWKAALGGQVAVMASGSAALQPRLARVFNAAGFGV 360
Query: 245 QVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 302
GYGLTE+SPVI+ R +G+VG P+ TE+KI AE E+ ++G
Sbjct: 361 MEGYGLTETSPVISVNDMRNGGFRIGTVGKPLERTEVKI--AEDGEIC---------IKG 409
Query: 303 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 362
QVM GY+K+ + T + L DG+ +TGDIG I G L + R K+
Sbjct: 410 PQVMMGYYKDEAKTSEVLI-DGYFHTGDIGEI----------DADGFLKITDRKKEMFKT 458
Query: 363 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 422
S G+ V P LE +S I Q++VIG+ ++ P A I PD + V AKR +I
Sbjct: 459 SGGKYVAPQLLENRCKQSRFIDQVMVIGEGEKMPAAFIQPDFDFVKEWAKRYNITITSNE 518
Query: 423 EL-SKEKTISLLYGELR-------KWTSKCSFQIGP 450
+L + EK I+ E+ KW F++ P
Sbjct: 519 DLVTNEKVIARFQEEVDAANENFAKWEKIKQFRLTP 554
>gi|294778087|ref|ZP_06743521.1| AMP-binding enzyme [Bacteroides vulgatus PC510]
gi|294448145|gb|EFG16711.1| AMP-binding enzyme [Bacteroides vulgatus PC510]
Length = 601
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 48/369 (13%)
Query: 71 NGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYET 129
+ D ++ LP HV+ERA + S G L + +++ ++ +P M SVP +E
Sbjct: 221 DQDVIMNFLPFTHVFERAWTCWCLSMGCTLSINLRPADIQKTIKEIRPTAMCSVPRFWEK 280
Query: 130 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 189
+Y+G+Q++I + ++ + I++ + + +Y+G P
Sbjct: 281 VYAGVQEKINETIGLKKKLMLDAIKVGREHN-LEYVYKGLT-------PP---------- 322
Query: 190 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVG 247
+L + EK +Y ++ IGI + G ++P + F ++G+ + G
Sbjct: 323 -----PVLHMKYKFYEKTIYSLLKKTIGIENGRFFPTAGAAIPPAVQEFVLSVGINMVAG 377
Query: 248 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 307
YGLTES+ +A +V+GSVG + H +++I E NE++ +RG +
Sbjct: 378 YGLTESTATVACENDNDHVVGSVGRIMPHVQVRI--GENNEIM---------LRGEGITH 426
Query: 308 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 367
GY+K +ATK A EDGW +TGD G+I H L L R KD S G+
Sbjct: 427 GYYKKEAATKAAFTEDGWFHTGDAGYIKDGH-----------LFLTERIKDLFKTSNGKY 475
Query: 368 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 427
+ P +E + I QI +I +++ A+I+P+ + V A + I + EL ++
Sbjct: 476 IAPQAIEAKLVVDRYIDQISIIADERKFVSALIIPEYKLVKEYAAKKGIRYESMEELLQK 535
Query: 428 KTISLLYGE 436
I L+ E
Sbjct: 536 PEIIDLFKE 544
>gi|374852348|dbj|BAL55283.1| hypothetical conserved protein [uncultured Bacteroidetes bacterium]
Length = 601
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 175/391 (44%), Gaps = 48/391 (12%)
Query: 60 IRSLYDIVPAENGDKF--LSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQ 116
+RSL I + G + LS LP H +ER Y + GI + Y ++ + +L+ +
Sbjct: 200 VRSLNLIPRSPEGQRLRALSFLPLNHSFERMVFYTYLAMGIGVYYAESLDTIAQNLREVK 259
Query: 117 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 176
PH SVP + E +Y I T + +R + + + Y G+ L
Sbjct: 260 PHVFTSVPRLLEKVYERIMATAQTLTGLKRTLFFWAMDLVKDYDPEAPYPLGYRLQLG-- 317
Query: 177 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDL 235
LA LV+KK + A+G + + V+G +LP H+
Sbjct: 318 --------------------------LARTLVFKKWKEALGGNVSLIVTGAAALPQHLAR 351
Query: 236 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 295
+ G+ + GYGLTE+SPVI+ + LGSVG PI E++I E E G
Sbjct: 352 IFWGAGIPIMEGYGLTETSPVISVNTFDAHRLGSVGRPIPGVEVRI---EPLEGYTEGEG 408
Query: 296 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 355
IV VRG VM GY+KNP AT + L E GW TGD+G + G L + R
Sbjct: 409 EIV-VRGPNVMVGYYKNPEATAEVLKE-GWFYTGDVGKLDKD----------GFLYITDR 456
Query: 356 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 415
K+ + G+ + P +E A S I Q +V+G+ ++ P A+IVP + AK
Sbjct: 457 KKELFKTAGGKYIAPQPIESALKSSLFIEQAMVVGEYRKFPAALIVPSFPNLEKWAKEQG 516
Query: 416 IVHADASEL-SKEKTISLLYGELRKWTSKCS 445
+ + EL + + L+ E+ + ++ S
Sbjct: 517 LSYTSREELVHHPRVVELIQAEVDRINAQFS 547
>gi|390955718|ref|YP_006419476.1| AMP-forming long-chain acyl-CoA synthetase [Aequorivita
sublithincola DSM 14238]
gi|390421704|gb|AFL82461.1| AMP-forming long-chain acyl-CoA synthetase [Aequorivita
sublithincola DSM 14238]
Length = 593
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 169/360 (46%), Gaps = 55/360 (15%)
Query: 76 LSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGI 134
LS LP HVYER Y G+E+ Y ++ + D+L+ +P M +VP V E +Y I
Sbjct: 219 LSFLPVCHVYERMLLYMYQYCGVEIYYAESLDTISDNLKEVKPEVMTAVPRVLEKVYDKI 278
Query: 135 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 194
+ + ++ + I + Y + G+ W ++
Sbjct: 279 YAKGGELTGIKKKLFFWAIELGLKYEPYGE--NGW-----------------WYETQL-- 317
Query: 195 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 253
LA KL++ K + A+G + KA SG L + + A G+ V GYGLTE+
Sbjct: 318 -------KLANKLIFSKWREALGGNLKAIASGSAPLQPRLARVFNAGGIPVMEGYGLTET 370
Query: 254 SPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 311
SPV++ R +G+VG P+ TE+KI AE E+L V+G QVM GY+K
Sbjct: 371 SPVVSVNDMRNHGFKIGTVGKPLRETEVKI--AEDGEIL---------VKGPQVMIGYYK 419
Query: 312 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 371
N T + L +DG+ +TGDIG I G L + R K+ S G+ V P
Sbjct: 420 NQEQTDEVL-KDGYFHTGDIGEIDSE----------GFLKITDRKKEMFKTSGGKYVAPQ 468
Query: 372 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM-AAKRLSIVHADASELSKEKTI 430
LE +S I Q++VIG+ ++ P A+I PD E + +K+ + +D E+ K + +
Sbjct: 469 VLENVMKQSRFIEQMMVIGEGEKMPAALIQPDFEFIKEWGSKKGRNISSDPREIVKNQAV 528
>gi|212715288|ref|ZP_03323416.1| hypothetical protein BIFCAT_00180 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661745|gb|EEB22320.1| hypothetical protein BIFCAT_00180 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 607
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 191/414 (46%), Gaps = 61/414 (14%)
Query: 62 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHY 119
+L++I+ E+ + L LP H + R Y + G+ + L DL+ ++P Y
Sbjct: 217 ALHEII-LEDHPRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTY 275
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
++ VP V+E +Y+ ++ R + A + ++ ++ E + + + S
Sbjct: 276 LLGVPRVFEKVYNAASRKAGMGWKGRLFLKAA--EAARDWSHMQQAGEKPTMKQTAEHLS 333
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FY 237
Y E VY+ ++ A+G V+ GG+ P+ + L F+
Sbjct: 334 Y------------------------EASVYRTVRGALGPRIRYVACGGA-PLDVSLAHFF 368
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
IG+ + GYG+TE++ AA R T NV+G+VG P + ++I D G
Sbjct: 369 NGIGLPMIQGYGMTETAAPFAANRVTDNVIGTVGQPAPGSSVRISD-----------DGE 417
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
++V+G V +GY P T +A EDGWL TGD+ I G + + GR K
Sbjct: 418 LQVKGPNVFRGYHNLPEKTAEAFTEDGWLKTGDLASIDDE----------GRITITGRKK 467
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 417
D I+ + G+NV P+ +E+ ++ ++ VV+G ++ GA++ D E +AA S+
Sbjct: 468 DIIITAGGKNVSPIPMEQEIVKCPIVEHAVVVGDNRPFIGALVTLDLEG--LAAWLPSVG 525
Query: 418 HADASELSKEKTISLLYGELRKWTSKCSFQIGPIH------VVDEPFTVNFLCL 465
+ + L + T++ ++ E++K+ K + + V+D FT CL
Sbjct: 526 LSADTPLDRIATVAAVHDEIQKYVDKANATVSRAESVRKFVVLDTQFTQENKCL 579
>gi|47220618|emb|CAG06540.1| unnamed protein product [Tetraodon nigroviridis]
Length = 681
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 174/405 (42%), Gaps = 57/405 (14%)
Query: 66 IVPAENGDKFLSMLPPWHVYERACGYFIFSRG--IELMYTAVRNLKDDLQRYQPHYMISV 123
IVP D +S LP H++ER I+ G + +R L DD++ QP V
Sbjct: 293 IVPTTE-DVSISFLPLAHMFERVVQTVIYGAGGRVGFFQGDIRLLPDDMKTLQPTVFPVV 351
Query: 124 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 183
P + +Y +Q S A T FK+ F + R + V
Sbjct: 352 PRLLNRVYDKVQ--------------------SGAATPFKKWLLNFAVDRKYAEVKDGVI 391
Query: 184 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL-PMHIDLFYEAIG 241
+ LW +KL++ K+Q+++G + V+G + P + A+G
Sbjct: 392 RSNSLW---------------DKLIFNKVQASLGGRVRVMVTGAAPISPTVLTFLRAALG 436
Query: 242 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 301
++ GYG TE + P G VG P+ +K+VD E + +G V ++
Sbjct: 437 CQIFEGYGQTECTAGCTFTMPGDATAGHVGAPLPCNMVKLVDVEEMNYFASNGEGEVCIK 496
Query: 302 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 361
G V +GY K+P T +ALDEDGWL+TGDIG P GVL + R K+
Sbjct: 497 GRNVFKGYLKDPEKTAEALDEDGWLHTGDIGKWLPS----------GVLKIIDRKKNIFK 546
Query: 362 LSTGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHAD 420
L+ GE + P ++E +RS + Q+ V G Q I+VPD E + AK L V
Sbjct: 547 LAQGEYIAPEKIENVYVRSGPVAQVFVHGDSLQSCLIGIVVPDPEVLPGFAKNLG-VQGS 605
Query: 421 ASELSKEKTI-----SLLYGELRKWTSKCSFQIGPIHVVDEPFTV 460
EL + K I S L R K Q+ I++ E FT+
Sbjct: 606 LQELCRNKEIKKAVLSDLTNLGRAAGLKSFEQVKDIYLHHEQFTI 650
>gi|404215632|ref|YP_006669827.1| Long-chain acyl-CoA synthetases (AMP-forming) [Gordonia sp. KTR9]
gi|403646431|gb|AFR49671.1| Long-chain acyl-CoA synthetases (AMP-forming) [Gordonia sp. KTR9]
Length = 602
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 160/346 (46%), Gaps = 51/346 (14%)
Query: 62 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYM 120
+ D V A + + L LP HV RA G E+ +T+ + NL D+ ++P +
Sbjct: 217 DILDKVIARDSKRLLMFLPLAHVLARAITLVAIEAGAEVGHTSDIPNLVDEFAVFKPSLI 276
Query: 121 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 180
+SVP V+E +Y+ +++ + A + I++ +Q +
Sbjct: 277 LSVPRVFEKVYNTARQKAHDGGKGKIFDAASDTAIAY----------------SQAKEKG 320
Query: 181 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 239
V L L H + LVYKK+++A+G + +SGG L + F+
Sbjct: 321 QVGLA-----------LKVKHGAFDALVYKKLRAALGDECQMAISGGAPLGARLGHFFSG 369
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
+GV V GYGLTE++ + P+ + +GSVG P++ ++I G G V
Sbjct: 370 VGVPVFEGYGLTETTAAFSVNTPSASKIGSVGKPLSGNAVRI-----------GDDGEVL 418
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+RG V Y++NP AT A+ DGW +TGD+G + G + + GR K+
Sbjct: 419 LRGGVVFTEYWQNPEATASAV-VDGWFHTGDLGTV----------DADGFITITGRKKEL 467
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
IV + G+NV P LE+ ++LI Q V+G + A+I D E
Sbjct: 468 IVTAGGKNVSPAGLEDVIRANALISQATVVGDAKPFVAALITIDPE 513
>gi|226365502|ref|YP_002783285.1| long-chain fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226243992|dbj|BAH54340.1| long-chain fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 605
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 156/336 (46%), Gaps = 51/336 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G + L LP HV+ RA + F + + +TA + L D ++PH+++SVP V+E +
Sbjct: 231 GRRTLMFLPLAHVFARAISFGAFDAKVTVAHTADLTTLLDQFAAFKPHFILSVPRVFEKV 290
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +A ++ Y+G + +K + +A +
Sbjct: 291 YN---------------------------SAKQKAYDGGKGSIFEKASATAIAYSEAQDN 323
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
L H L +KLVY K+++A+G VSGG +L + F+ IGV V GYG
Sbjct: 324 GGAGLGLKLKHALFDKLVYSKLRTALGGECDRAVSGGAALGARLGHFFRGIGVPVYEGYG 383
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE+S ++ +G+VG PI+ KI G G + ++G V GY
Sbjct: 384 LTETSAAVSVNTTRAQKVGTVGKPIDGHAAKI-----------GEDGELLLKGPVVFGGY 432
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+ N AT ++ DGW +TGD+G I G + + GR K+ IV + G+NV
Sbjct: 433 WHNDQATADSI-RDGWFHTGDLGSIDEE----------GYISITGRKKEIIVTAGGKNVA 481
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P LE+A LI Q +V+G + GA+I D E
Sbjct: 482 PAVLEDALRAHPLISQCLVVGDGKPFIGALITLDSE 517
>gi|443705653|gb|ELU02086.1| hypothetical protein CAPTEDRAFT_224649 [Capitella teleta]
Length = 649
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 170/374 (45%), Gaps = 51/374 (13%)
Query: 62 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT--AVRNLKDDLQRYQPHY 119
S++ IV N D +S LP H++ER I G + ++ VR L +DLQ P
Sbjct: 256 SIHPIVINSN-DSHISYLPLAHMFERLVHLMIVQHGARIGFSRGDVRLLTEDLQALSPTI 314
Query: 120 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 179
+VP L + I ++ + ++ + L ++F+ L R
Sbjct: 315 FPTVP----RLLNRIHDKVLMGVSGSKIKS-MLFNLAFS--------RKMALLRQ----- 356
Query: 180 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI-DLFY 237
I +W +KLV+ K+Q +G + + G L H+ D
Sbjct: 357 ----------GVITNTSVW------DKLVFSKVQKLLGGRVRFCIVGSAPLAAHVLDFTR 400
Query: 238 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 297
A G V GYG TE++ ++ P + G VG P+ +K+VD + KG
Sbjct: 401 AAFGCLVTEGYGQTEATAGVSITLPHEYIPGQVGPPLPCNHVKLVDVPEMDYYAKDGKGE 460
Query: 298 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 357
V VRG+ +M GY+K+P TK+A+DEDGW++TGD+G P G L + R K
Sbjct: 461 VCVRGTNLMSGYYKDPERTKEAIDEDGWVHTGDVGQWMPQ----------GTLKIIDRRK 510
Query: 358 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSI 416
L+ GE + P ++E RSSL+ Q+ V G Q P AI+VPD E + AK+ +
Sbjct: 511 HIFKLAQGEYLAPEKVEGVYTRSSLVAQVFVDGNSLQSFPVAIVVPDPEVLPGWAKKQGL 570
Query: 417 VHADASELSKEKTI 430
D EL + KT+
Sbjct: 571 -SGDIQELCENKTV 583
>gi|304389536|ref|ZP_07371499.1| possible long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|304327346|gb|EFL94581.1| possible long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
Length = 612
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 179/401 (44%), Gaps = 66/401 (16%)
Query: 74 KFLSMLPPWHVYERACGYFIFS-RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 132
+ L LP HV+ R Y + S RG+ V+N+ +DLQ ++P MI VP V E +Y+
Sbjct: 236 RLLLFLPLAHVFARFSSYTVLSGRGVLGCVPNVKNMLNDLQSFRPTSMIVVPRVLEKIYT 295
Query: 133 --------GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 184
G++ IF +AA+ I S A R + GF L R++
Sbjct: 296 AAQVKAGRGLKHSIFNWAAAQ------AIHYSEALNDPNRKFVGFRLHRSRA-------- 341
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 243
+A+KL++ K+ +G + +SGG L + F+ +G+
Sbjct: 342 ------------------IADKLLFSKLLDLMGGECRWVISGGAPLGARLGHFFRGVGLT 383
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
V G+GLTE++ P +G+VG P+ E+KI G + VR
Sbjct: 384 VIEGWGLTETAGPATGNLPGNIRIGTVGRPLPGVELKI-----------DVSGEIFVRSR 432
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
VM+GY NP AT + LD DGW +GD+G I G L + GR K+ IV +
Sbjct: 433 IVMRGYRNNPEATGEVLDSDGWFASGDLGEIDDD----------GYLSITGRKKELIVTA 482
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADA 421
+G+NV P LE++ L+ +VVIG + A++ D+E +A +L +
Sbjct: 483 SGKNVSPAPLEDSFRGHPLVSNVVVIGDKRPFVSALVTLDREMLPTWLANHKLPPMDPAT 542
Query: 422 SELSKEKTISLLYGELRKWTSKCSFQ-IGPIHVVDEPFTVN 461
+ + SL+ G R S + I + V+ FTV+
Sbjct: 543 AAIHPAVQESLMRGAQRASASVSRAESIRKVRVIIGDFTVD 583
>gi|403251222|ref|ZP_10917573.1| AMP-forming long-chain acyl-CoA synthetase [actinobacterium SCGC
AAA027-L06]
gi|402915430|gb|EJX36402.1| AMP-forming long-chain acyl-CoA synthetase [actinobacterium SCGC
AAA027-L06]
Length = 594
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 171/361 (47%), Gaps = 50/361 (13%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G L LP HV+ R + G+ L + + + L DL ++P ++++VP ++E +
Sbjct: 220 GGSTLLFLPVAHVFGRMVQIGSITAGLHLAHCSDLTKLPSDLASFKPTFVLAVPRIFEKI 279
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
++G + + +A + + ++ AY+ L +
Sbjct: 280 FNGAEAK--AQAAGKGKIFHKAAEVAIAYS-------------------------KSLDS 312
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
+ I +L H L +KLVY KI++ +G +A +SGG L + FY G++V GYG
Sbjct: 313 KKISPLLKLQHGLFDKLVYTKIRTGLGGRVEAAISGGAPLGERLGHFYRGAGIRVLEGYG 372
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE++ + + +GSVG PI T IKI AE EVL ++G VMQGY
Sbjct: 373 LTETTAGATLNLTSAHRVGSVGKPIPGTTIKI--AEDGEVL---------IKGPIVMQGY 421
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
++N +A K+ DG+ +GD+G I G L + GR K+ IV + G+NV
Sbjct: 422 WQNDAANKEVFTSDGYFKSGDLGKIDEE----------GYLSIVGRKKELIVTAGGKNVA 471
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 429
P LE+ LI Q +V+G ++ A+I D + + A A ++L+K+ T
Sbjct: 472 PAVLEDRLRSHPLISQCMVVGDNKPFIAALITIDPDAIKPWAVANKKEGASIADLAKDPT 531
Query: 430 I 430
+
Sbjct: 532 L 532
>gi|296272883|ref|YP_003655514.1| AMP-dependent synthetase and ligase [Arcobacter nitrofigilis DSM
7299]
gi|296097057|gb|ADG93007.1| AMP-dependent synthetase and ligase [Arcobacter nitrofigilis DSM
7299]
Length = 573
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 176/389 (45%), Gaps = 62/389 (15%)
Query: 59 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQP 117
Q++ + +++ + + LS+LP H++ERA + SRG+ + + + N+ ++ +P
Sbjct: 197 QVKDINELIQLDKKEVILSILPLAHIFERAVMSYYISRGVSIYFIDDITNVATLMKTVRP 256
Query: 118 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 177
M VP + E +Y I+ I +++A SFA+ + L N +
Sbjct: 257 TMMTVVPRLLEKIYYKIKTNISDKPFFSKLIA------SFAF--------HYALKENINK 302
Query: 178 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 236
S L L + KLVY K + G K VSGG L +I F
Sbjct: 303 DSILFKLFN-------------------KLVYSKFREIFGGRIKWLVSGGAPLEKNIYQF 343
Query: 237 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 296
+ I V + GYG+TE SPVI+ P N +G+ G + E+KI E +E+L
Sbjct: 344 FLNIEVPLYQGYGMTEFSPVISTNYPGANRVGTSGKAMPTAEVKI---ENDELL------ 394
Query: 297 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 356
V+G +M+GY N TK+ +DE GWL+TGD+ I G + ++ R
Sbjct: 395 ---VKGPSLMKGYLNNEELTKKTIDEKGWLHTGDVASIDE----------DGYIYIQSRK 441
Query: 357 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 416
KD STGE V + +E+ ++ I V+I +++ A++ D E K ++
Sbjct: 442 KDIFKTSTGEYVNAIPIEQELSKNKYIEFAVLISSNRKYTTALLFVDHERYTQHEKSSNL 501
Query: 417 V---HADASELSK--EKTISLLYGELRKW 440
+ + S + K + I L ++ KW
Sbjct: 502 TIDEYFNQSRIQKSIQNHIDRLNKKVNKW 530
>gi|444432232|ref|ZP_21227391.1| long-chain fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
gi|443887061|dbj|GAC69112.1| long-chain fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
Length = 594
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 162/336 (48%), Gaps = 52/336 (15%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G L LP HV+ R + L +T + NL +DL ++P+Y++SVP V+E +
Sbjct: 221 GKSTLLFLPLAHVFARVVAVGCVENAVILGHTNDIPNLIEDLGEFKPNYVLSVPRVFEKV 280
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +++ + + + RA A TA + + + + P + L
Sbjct: 281 YNSAKQKAYDGGKGK-IFDRA------ADTAIE-----YSKSLDAGGPGLGLKL------ 322
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYG 249
H L ++LVY K+++A+G + G +SGG L + F+ +G+ V GYG
Sbjct: 323 ---------KHALFDRLVYGKLRAALGDNCEGAISGGAPLGARLGHFFRGVGIPVYEGYG 373
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
L+E++ + A T +GSVG P+ + I D G V ++G V GY
Sbjct: 374 LSETTAAVTANNETDQQVGSVGRPVPGVTVAIAD-----------DGEVLLQGPVVFGGY 422
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
+KN AT +++ +DGW +TGDIG + G L + GR K+ IV + G+NV
Sbjct: 423 WKNQQATDESI-KDGWFHTGDIG-----------KLDNGFLHITGRKKELIVTAGGKNVS 470
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
P +LE+A L+ Q +V+G ++ A+I D E
Sbjct: 471 PAQLEDAIRAHPLVSQCLVVGDNKPFIAALITLDVE 506
>gi|377571752|ref|ZP_09800855.1| long-chain fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
gi|377530887|dbj|GAB46020.1| long-chain fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
Length = 602
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 161/346 (46%), Gaps = 51/346 (14%)
Query: 62 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYM 120
+ D V A + + L LP HV RA G E+ +T+ + NL D+ ++P +
Sbjct: 217 DILDKVIARDEKRLLMFLPLAHVLARAITLVAIEAGAEVGHTSDIPNLVDEFAVFKPSLI 276
Query: 121 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 180
+SVP V+E +Y+ +++ + A + I+++ A ++ G L
Sbjct: 277 LSVPRVFEKVYNTARQKAHDGGKGKIFDAASDTAIAYSQ-ATEKGQVGLALKVK------ 329
Query: 181 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 239
H + + LVYKK+++A+G + +SGG L + F+
Sbjct: 330 --------------------HGVFDALVYKKLRAALGGECQMAISGGAPLGARLGHFFSG 369
Query: 240 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 299
+GV V GYGLTE++ + P+ + +GSVG P++ ++I G G V
Sbjct: 370 VGVPVFEGYGLTETTAAFSVNTPSASKIGSVGKPLSGNAVRI-----------GDDGEVL 418
Query: 300 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 359
+RG V Y++NP AT A+ DGW +TGD+G + G + + GR K+
Sbjct: 419 LRGGVVFTEYWQNPEATASAV-VDGWFHTGDLGTV----------DADGFITITGRKKEL 467
Query: 360 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
IV + G+NV P LE+ ++LI Q V+G + A+I D E
Sbjct: 468 IVTAGGKNVSPAGLEDVIRANALISQATVVGDAKPFVAALITIDPE 513
>gi|300778919|ref|ZP_07088777.1| long-chain-fatty-acid--CoA ligase [Chryseobacterium gleum ATCC
35910]
gi|300504429|gb|EFK35569.1| long-chain-fatty-acid--CoA ligase [Chryseobacterium gleum ATCC
35910]
Length = 592
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 176/386 (45%), Gaps = 63/386 (16%)
Query: 76 LSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGI 134
LS LP H++ER Y G L + ++ + ++++ +PHYM VP + E +Y I
Sbjct: 222 LSFLPICHIFERMLFYLYQYNGFSLYFAESIEKMGENVKEVKPHYMTVVPRLVEKVYDKI 281
Query: 135 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 194
T S+A + ++ + A I + +++ PS L +I
Sbjct: 282 YN---TGSSAGGLKSKIF------FWALNLISKKKTISK----PSGLQEII--------- 319
Query: 195 AILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 253
A+KLV+ K + +G VSG +L ++L ++ G+ + GYGLTE+
Sbjct: 320 ---------ADKLVFSKWREGLGGEIVTLVSGSAALSTRLNLIFQNAGIPILEGYGLTET 370
Query: 254 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 313
SPVI+ +G+VG P+++ ++KI + G + V+G V +GYF+N
Sbjct: 371 SPVISVNSFDKMKVGTVGVPLDNLKVKIQE-----------DGEITVKGPSVFKGYFQNE 419
Query: 314 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 373
T++A EDG+ TGDIG I G L + R K+ S G+ + P +
Sbjct: 420 EMTREAFTEDGYFKTGDIGHI----------DSDGFLQITDRKKEMFKTSGGKYIAPQTI 469
Query: 374 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK------ 426
E A S I QI+V+G ++ P A++ PD E A R ++ + + E++K
Sbjct: 470 ENLAKASKFIEQIMVVGDGEKMPCALVQPDFEFAKSWAMRNNLNIGSTPEEIAKSPELKQ 529
Query: 427 --EKTISLLYGELRKWTSKCSFQIGP 450
EK I + L W ++ P
Sbjct: 530 RIEKEIEGINEHLGNWEKIKKIELTP 555
>gi|226360993|ref|YP_002778771.1| long-chain fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226239478|dbj|BAH49826.1| long-chain fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 599
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 162/343 (47%), Gaps = 55/343 (16%)
Query: 69 AENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVY 127
A G++ L+ LP HV RA +F G + ++ + + R++P+ ++ VP V+
Sbjct: 218 ARPGNRVLTFLPLAHVLARAVSLAMFEGGATQAHWSDFGTVTGEFARFRPNTILGVPRVF 277
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY---EGFCLTRNQKQPSYLVAL 184
E + G AAR+ + ++ KRI+ E + ++ Q + L
Sbjct: 278 EKVRDG---------AARKAASGGGLQ--------KRIFDFAEATAVAYSEAQDTGGAPL 320
Query: 185 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVK 243
L H LA++LVY K+++A+G +SGGG+L + F+ IGV
Sbjct: 321 R-----------LRLEHALADRLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGIGVP 369
Query: 244 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 303
V GYGLTES+ P +G+VG P+ ++I + G +++RG
Sbjct: 370 VYEGYGLTESTAAHCVNVPGAQQIGTVGRPLGGNSVRIAE-----------DGEIELRGG 418
Query: 304 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 363
V GY++N AT++ LD DGW TGD+G + G L + GR KD ++ +
Sbjct: 419 VVFGGYWRNEHATREVLD-DGWFRTGDLGDLDES----------GYLTITGRKKDLLITA 467
Query: 364 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 406
G+NV P LE+ L+ Q VV+G + GA++ D +E
Sbjct: 468 GGKNVSPGPLEDRLRSHPLVSQAVVVGDARPFIGALLTVDPQE 510
>gi|209696156|ref|YP_002264086.1| AMP-binding protein [Aliivibrio salmonicida LFI1238]
gi|208010109|emb|CAQ80434.1| putative AMP-binding enzyme [Aliivibrio salmonicida LFI1238]
Length = 611
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 174/386 (45%), Gaps = 55/386 (14%)
Query: 73 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLY 131
D L LP HV+ERA +++ +G Y NL KD L +P M +VP YE ++
Sbjct: 228 DVSLCFLPLSHVFERAWTFYVLYKGAINCYLPNTNLIKDALIEVKPTVMCAVPRFYEKIF 287
Query: 132 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
S + +++ + A R+V+ + + +A K+ ++PS+
Sbjct: 288 STVHEKVSRAPAHRKVMFTWAVNMGAKMSACKQ---------EAREPSW----------- 327
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 250
IL H +A+KLV K++ +G + + GG L I F+ A+GV V++GYG+
Sbjct: 328 ----ILKQSHKIADKLVLSKLRMILGGNINFMPCGGAKLDATIGRFFHALGVNVKLGYGM 383
Query: 251 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 310
TE++ I+ S+G + E+KI G K + VRG VM+GY+
Sbjct: 384 TETTATISCWEDGKFHPDSIGTLMPGAEVKI-----------GKKNEILVRGPMVMKGYY 432
Query: 311 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 370
P T EDG+L TGD G G L + R K+ + S G+ + P
Sbjct: 433 NKPEETALTFTEDGFLKTGDAGEF----------DADGNLYITDRIKELMKTSGGKYIAP 482
Query: 371 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 426
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 483 QVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDALEEYAKELNIAYHDRMELVKNSEI 542
Query: 427 ----EKTISLLYGELRKWTSKCSFQI 448
EK ++ L EL ++ F +
Sbjct: 543 VEMLEKRVANLQKELARFEQVKKFTL 568
>gi|332185644|ref|ZP_08387392.1| AMP-binding enzyme family protein [Sphingomonas sp. S17]
gi|332014622|gb|EGI56679.1| AMP-binding enzyme family protein [Sphingomonas sp. S17]
Length = 595
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 157/338 (46%), Gaps = 61/338 (18%)
Query: 75 FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 132
FLS LP H YE G +F + G ++ Y + L +++ +P M VP ++E L++
Sbjct: 225 FLSFLPLSHAYEHTGGQHFPIALGGQIYYAEGLDKLAANIEEVRPTIMFVVPRLFEVLHT 284
Query: 133 GIQKQIFTSSA-ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 191
I K I R++ +AL + +Y R+ +
Sbjct: 285 RIAKAIDKKGGLGARLLDQALALGARSYNGKLRLVD------------------------ 320
Query: 192 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 250
P L L KI G KA VSGG L I LF+ +IG+ + GYG
Sbjct: 321 ------RPAQLAVATLFKPKIAKRFGGRLKAMVSGGAPLNPEIGLFFHSIGLTLLQGYGQ 374
Query: 251 TESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
TE++PVIA RP V + +VG P+ TE++I AE E+L VRG VM GY
Sbjct: 375 TEAAPVIACNRPKAGVRMETVGPPLADTEVRI--AEDGEIL---------VRGELVMHGY 423
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
++NP+ T++ L +DGWL+TGDIG G L + R KD I+ GENV
Sbjct: 424 WRNPTETERVL-KDGWLHTGDIGEFDD----------AGRLRITDRKKDLIINDKGENVA 472
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRP--GAIIVPDKE 405
P ++E I Q ++ G RRP A+IVPD E
Sbjct: 473 PQKVEGMLTLQPEIAQAMIAG--DRRPYMVALIVPDSE 508
>gi|410099275|ref|ZP_11294247.1| hypothetical protein HMPREF1076_03425 [Parabacteroides goldsteinii
CL02T12C30]
gi|409219297|gb|EKN12260.1| hypothetical protein HMPREF1076_03425 [Parabacteroides goldsteinii
CL02T12C30]
Length = 633
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 183/377 (48%), Gaps = 49/377 (12%)
Query: 76 LSMLPPWHVYERACGYFIFS-RG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLV 126
L +LP H + G++IF +G +++ T + LK+ +++ ++P+ ++SVP +
Sbjct: 222 LVILPLDHCFAHVVGFYIFMYKGASVATVQVGRTGMETLKNIPVNIKEFKPYLILSVPAL 281
Query: 127 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 186
+ I++ I + + +++ Y
Sbjct: 282 AKNFKKNIEQGIRAQGNMVNRLFHMGLNVAYTYNGDGGD----------------DKGRG 325
Query: 187 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 245
W + +L P+ L + +++ K++ G K + GG L + FY AIG+ +
Sbjct: 326 WRF------LLKPVVSLFDSIIFSKVRENFGSELKFFIGGGALLDKDLQKFYYAIGLPMY 379
Query: 246 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 305
GYGL+E++PVI+ P + GS G + ++KI D E E LP G KG + +RG V
Sbjct: 380 QGYGLSEATPVISTNGPRHHRFGSSGVLVQPLDLKICDQEGKE-LPLGEKGEIVIRGENV 438
Query: 306 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 365
M GY+KNP++T + + +DGWL TGD+G++ G+L + GR K ++ S G
Sbjct: 439 MAGYWKNPASTTETI-KDGWLYTGDMGYMGKD----------GLLYVLGRFKSLLIGSDG 487
Query: 366 ENVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASE 423
E P +EEA + SS I Q+++ A++VP+K+ + + LS + D +E
Sbjct: 488 EKYSPEGIEEALVEHSSCIDQLLLYNNQNPYTVALVVPNKDHL---KRHLSHLQLDLNTE 544
Query: 424 LSKEKTISLLYGELRKW 440
KE+ I ++ ++ ++
Sbjct: 545 KGKEEAIRIIQKQIDRF 561
>gi|441517958|ref|ZP_20999688.1| long-chain fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441455273|dbj|GAC57649.1| long-chain fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 595
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 185/397 (46%), Gaps = 58/397 (14%)
Query: 72 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 130
G L LP HV+ RA G+ L +T+ + NL ++L ++P+Y++SVP V+E +
Sbjct: 222 GKTTLLFLPLAHVFARAIAVGCMENGVVLGHTSDLPNLVENLGVFKPNYVLSVPRVFEKV 281
Query: 131 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 190
Y+ +++ + + A A+ + +G + P + +
Sbjct: 282 YNSARQKAIDGGKGG-----IFDKAADAAIAYSKALDG-------RGPGLGLKI------ 323
Query: 191 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 249
H + +KLVY K++ A+G +A VSGG + + F+ +G+ V GYG
Sbjct: 324 ---------KHAVFDKLVYGKLRDALGGQCEAAVSGGAPMGARLGHFFRGVGIPVFEGYG 374
Query: 250 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 309
LTE++ + A + +GSVG P+ I I AE EVL +RG + GY
Sbjct: 375 LTETTAAVTANNEEHSRIGSVGRPVPGVSIAI--AEDGEVL---------LRGPMIFTGY 423
Query: 310 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 369
++N AT ++ DGW +TGDIG++ G L + GR K+ IV + G+NV
Sbjct: 424 WQNADATADSI-RDGWFHTGDIGYLED-----------GFLFITGRKKELIVTAGGKNVS 471
Query: 370 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS--ELSKE 427
P +LE+ ++ Q +V+G GA++ D E +R + AD S EL+K
Sbjct: 472 PAQLEDTIRAHPMVSQCLVVGDKMPFIGALLTIDPESAPGWLERQGL-PADTSMEELAKN 530
Query: 428 KTISLLYGE-LRKWTSKCSF--QIGPIHVVDEPFTVN 461
+ + E + +K S QI V+ FT++
Sbjct: 531 PVLRAEFEEAVASANAKVSAAEQIKKFDVLATDFTID 567
>gi|225021764|ref|ZP_03710956.1| hypothetical protein CORMATOL_01792 [Corynebacterium matruchotii
ATCC 33806]
gi|224945460|gb|EEG26669.1| hypothetical protein CORMATOL_01792 [Corynebacterium matruchotii
ATCC 33806]
Length = 610
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 160/339 (47%), Gaps = 48/339 (14%)
Query: 69 AENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 127
A G + L+ LP HV RA + G + ++ L + QR +P+ ++ VP V+
Sbjct: 229 ARPGSRVLTFLPLAHVLSRAVSLAVAIGGGTQSHWSNFSTLGVEFQRARPNLILGVPRVF 288
Query: 128 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 187
E +++ SA A +R + + A K E + PS ++ L
Sbjct: 289 EKVHN---------SAVANATAGGPVRAALFHKARKVAIEYSRALDTSEGPSRMLKL--- 336
Query: 188 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 246
H ++LVY KI++A+G S +SGG ++ I F+ IG +
Sbjct: 337 ------------QHKTYDRLVYSKIRAAMGNSVHYAISGGSAMSPEILHFFRGIGAPIYE 384
Query: 247 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 306
GYGLTE++ A +G+VG PI ++I D +E+L ++G+ V
Sbjct: 385 GYGLTETTAA-ATVDFVDQKIGTVGPPIGGVSVRIND--DSEIL---------IKGTTVF 432
Query: 307 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 366
GY+ NP+AT ++ +DGW NTGD+G I G LV+ GR KD IV + G+
Sbjct: 433 DGYWNNPTATAESFTDDGWFNTGDLGEILE----------SGHLVITGRKKDLIVTAGGK 482
Query: 367 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 405
NV P +E+A + LI Q +V+G + G ++ D++
Sbjct: 483 NVSPEPMEDALVAHPLISQAMVVGDGKPFIGLLVTLDED 521
>gi|114778907|ref|ZP_01453704.1| long-chain fatty-acid-CoA ligase [Mariprofundus ferrooxydans PV-1]
gi|114550876|gb|EAU53442.1| long-chain fatty-acid-CoA ligase [Mariprofundus ferrooxydans PV-1]
Length = 521
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 197/415 (47%), Gaps = 65/415 (15%)
Query: 55 MTNFQ-IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDD 111
+TN + + S+ + E GD+ LS LP H ER +F+ +S G+ + + + + +
Sbjct: 134 ITNLEAVPSVISLRATEGGDRMLSFLPLAHALERTGTHFLSYSFGLSVAFAERPDTVAKN 193
Query: 112 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 171
+ +P MI+VP + E + S I Q+ S+ ++ + +++S
Sbjct: 194 MTEARPTVMITVPRMLEVVRSRILGQVAQQSSLKQHLFHLYLKLS--------------- 238
Query: 172 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 230
R Q+ ++ +L PL ++LV K++ G + +SGG L
Sbjct: 239 -RKQR-------------LNVLQQMLLPL---LDRLVGAKVRQRFGGRLRVLISGGAPLN 281
Query: 231 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL-GSVGHPINHTEIKIVDAETNEV 289
+ + F+EA+G+ V GYGL+E++P++AA P C+ GSVG +I I D
Sbjct: 282 VEVAGFFEALGLPVIEGYGLSEAAPLLAA-NPMCDRRPGSVGVAAKGVDINIAD------ 334
Query: 290 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 349
G + RG+ +M GY+ N ATK+A+ +DGWL TGDIG + G
Sbjct: 335 -----DGEILARGANIMPGYWHNRKATKEAI-QDGWLLTGDIGRLDKD----------GY 378
Query: 350 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 409
L + GR +D I+ S GEN+ P +E+ L S I Q+VV G + A++V ++E
Sbjct: 379 LYITGRKRDIIINSGGENIAPQRIEQLLLIDSQIDQVVVYGDQKPHLVALVVANEEACTA 438
Query: 410 AAKRLSIVHADASELSK----EKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 460
A+ + + +L +K + + K + Q+ IH++ EPF++
Sbjct: 439 WAREKGLPESGWQQLRDSYILKKHLQTKINNILKPLNGFE-QVRRIHLISEPFSI 492
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,193,896,257
Number of Sequences: 23463169
Number of extensions: 300131946
Number of successful extensions: 969418
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14016
Number of HSP's successfully gapped in prelim test: 25742
Number of HSP's that attempted gapping in prelim test: 888334
Number of HSP's gapped (non-prelim): 53389
length of query: 467
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 321
effective length of database: 8,933,572,693
effective search space: 2867676834453
effective search space used: 2867676834453
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 79 (35.0 bits)