Query 012264
Match_columns 467
No_of_seqs 177 out of 314
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 06:00:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012264.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012264hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1t98a2 a.47.6.1 (A:119-281) C 77.4 11 0.0008 32.4 11.0 78 23-101 40-119 (163)
2 d1l9la_ a.64.1.1 (A:) Granulys 59.5 12 0.00088 27.2 6.6 63 89-163 6-69 (74)
3 d2gtga1 a.64.1.1 (A:2-79) Sapo 55.8 24 0.0017 25.1 7.6 64 89-163 6-70 (78)
4 d1n69a_ a.64.1.3 (A:) Saposin 40.8 29 0.0021 25.2 6.0 56 88-149 5-62 (78)
5 d1of9a_ a.64.1.4 (A:) Ameobapo 29.0 91 0.0066 22.1 7.6 56 88-150 6-62 (77)
6 d1zavu1 a.108.1.1 (U:1-30) Rib 27.3 13 0.00095 23.7 1.6 17 126-142 14-30 (30)
7 d1nkla_ a.64.1.1 (A:) NK-lysin 23.2 47 0.0034 23.5 4.4 56 89-150 6-61 (78)
8 d1nhoa_ c.47.1.1 (A:) MTH807, 22.0 8.5 0.00062 28.0 -0.1 27 118-144 7-33 (85)
9 d1g73a_ a.7.4.1 (A:) Smac/diab 18.1 16 0.0012 31.4 0.8 34 253-286 108-142 (157)
10 d1g2ya_ a.34.2.1 (A:) Hepatocy 18.0 62 0.0045 20.4 3.4 24 47-70 5-29 (31)
No 1
>d1t98a2 a.47.6.1 (A:119-281) Chromosome partition protein MukF (KicB), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=77.40 E-value=11 Score=32.43 Aligned_cols=78 Identities=21% Similarity=0.178 Sum_probs=68.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHh--hhHHHHHHHHHHHHHHHHhHhhh
Q 012264 23 SKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQ--NVLAANEFIELFCELIVARLSII 100 (467)
Q Consensus 23 sKcKt~LKLAisRLklLqnKr~a~~kq~RrDIAqLL~~Gk~e~ARIRVE~LIrED--~~ieayEILElYCELLlaRl~lI 100 (467)
.-+|-.+.-...||.+-|+-..++..+.+.|||.||.+. .-.|-..+|+|+.|- ++-|+-|+|+---+-|.+.+--|
T Consensus 40 apLkySVaeifd~Idl~QR~mDeQQ~~Vk~eIA~LL~qd-W~~AI~~Ce~LL~eTs~tLRELqdtL~aagd~lqa~Ll~I 118 (163)
T d1t98a2 40 APLKYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKD-WRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRI 118 (163)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhheeHHHHHhhhhHHHHhHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHH
Confidence 457777888889999999999999999999999999987 667999999999974 67899999999988888887766
Q ss_pred h
Q 012264 101 A 101 (467)
Q Consensus 101 e 101 (467)
+
T Consensus 119 Q 119 (163)
T d1t98a2 119 Q 119 (163)
T ss_dssp H
T ss_pred H
Confidence 6
No 2
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.53 E-value=12 Score=27.20 Aligned_cols=63 Identities=16% Similarity=0.294 Sum_probs=43.5
Q ss_pred HHHHHHHhHhhhhccCCCChhHHHHHHHHHhhCCCCCCch-hHHHHHHHHHHHHcHHHHHHHhhcCCCCCCCHHHH
Q 012264 89 FCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIP-ELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLI 163 (467)
Q Consensus 89 YCELLlaRl~lIek~KeCP~eLkEAIsSLIfAApR~sDlP-EL~~LR~~f~~KYGKeFv~aA~Elr~~~~VN~kIi 163 (467)
-|++++..+.-+-..+. -.++.+++..+ |..+| .+......|...||..++..... +++|..|
T Consensus 6 tC~~vv~~ve~l~~n~t-~~~I~~~l~~~------C~~lp~~~~~~C~~lv~~Y~~~ii~~l~~-----~~~P~~I 69 (74)
T d1l9la_ 6 TCLTIVQKLKKMVDKPT-QRSVSNAATRV------CRTGRSRWRDVCRNFMRRYQSRVIQGLVA-----GETAQQI 69 (74)
T ss_dssp HHHHHHHHHHHHCSSCC-HHHHHHHHHHG------GGSSCHHHHHHHHHHHHHHHHHHHHHHHT-----TCCHHHH
T ss_pred HHHHHHHHHHHHhCCCC-HHHHHHHHHhH------HHHCCHHHHHHHHHHHHHHHHHHHHHHHH-----CCCHHHH
Confidence 58888888776543322 34566666554 56777 58999999999999999876542 4556543
No 3
>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.82 E-value=24 Score=25.05 Aligned_cols=64 Identities=19% Similarity=0.447 Sum_probs=44.7
Q ss_pred HHHHHHHhHhhhhccCCCChhHHHHHHHHHhhCCCCCCch-hHHHHHHHHHHHHcHHHHHHHhhcCCCCCCCHHHH
Q 012264 89 FCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIP-ELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLI 163 (467)
Q Consensus 89 YCELLlaRl~lIek~KeCP~eLkEAIsSLIfAApR~sDlP-EL~~LR~~f~~KYGKeFv~aA~Elr~~~~VN~kIi 163 (467)
.|+.++..+.-+-+...--.++++++..+ |.-+| ++....+.|..+||..+...... .++|.-+
T Consensus 6 ~C~~~v~~~~~~l~~~~t~~~I~~~l~~~------C~~lp~~~~~~C~~~v~~y~~~ii~~l~~-----~~~p~~i 70 (78)
T d2gtga1 6 VCEFLVKEVTKLIDNNKTEKEILDAFDKM------CSKLPKSLSEECQEVVDTYGSSILSILLE-----EVSPELV 70 (78)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHH------TTSSCHHHHHHHHHHHHHHHHHHHHHHHT-----TCCHHHH
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHH------HHhCCcchhhhhHHHHHHHHHHHHHHHHh-----CCCHHHH
Confidence 57778777765544444455677766664 55677 58999999999999999876532 4555543
No 4
>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.76 E-value=29 Score=25.15 Aligned_cols=56 Identities=13% Similarity=0.234 Sum_probs=36.5
Q ss_pred HHHHHHHHhHh-hhhccCCCChhHHHHHHHHHhhCCCCCCch-hHHHHHHHHHHHHcHHHHHHH
Q 012264 88 LFCELIVARLS-IIAKRRECPADLKEGIASVIFAAPRCSEIP-ELGAIRDIFEKKYGKDFVSAA 149 (467)
Q Consensus 88 lYCELLlaRl~-lIek~KeCP~eLkEAIsSLIfAApR~sDlP-EL~~LR~~f~~KYGKeFv~aA 149 (467)
..|++++.-+. +|...+..-..+..++-.+ |.-+| .+......|..+||..++...
T Consensus 5 ~~C~~~v~~v~~~l~~n~t~~~~I~~~l~~~------C~~lp~~~~~~C~~~V~~y~~~ii~~l 62 (78)
T d1n69a_ 5 QDCIQMVTDIQTAVRTNSTFVQALVEHVKEE------CDRLGPGMADICKNYISQYSEIAIQMM 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHH------GGGGCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHH------HHhCChHHHHHhHHHHHHHHHHHHHHH
Confidence 35777777774 4444333333344444443 34556 789999999999999998753
No 5
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}
Probab=29.04 E-value=91 Score=22.05 Aligned_cols=56 Identities=9% Similarity=0.114 Sum_probs=41.3
Q ss_pred HHHHHHHHhHhhhhccCCCChhHHHHHHHHHhhCCCCCCch-hHHHHHHHHHHHHcHHHHHHHh
Q 012264 88 LFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIP-ELGAIRDIFEKKYGKDFVSAAT 150 (467)
Q Consensus 88 lYCELLlaRl~lIek~KeCP~eLkEAIsSLIfAApR~sDlP-EL~~LR~~f~~KYGKeFv~aA~ 150 (467)
..|++++..+.-+.+.+. -.++.+++..+. .-+| ++....+.|..+||..++....
T Consensus 6 ~~C~~~v~~~~~l~~~~t-~~~I~~~l~~~C------~~lp~~~~~~C~~~v~~y~~~ii~~l~ 62 (77)
T d1of9a_ 6 NLCTGLINTLENLLTTKG-ADKVKDYISSLC------NKASGFIATLCTKVLDFGIDKLIQLIE 62 (77)
T ss_dssp HHHHHHHHHHHHHCSSSC-SHHHHHHHHHHH------TTCSSTTHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCc-HHHHHHHHHHHH------HHCChHHHHHhHHHHHHHHHHHHHHHH
Confidence 368888888776655443 356777776654 4554 6789999999999999988654
No 6
>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=27.33 E-value=13 Score=23.70 Aligned_cols=17 Identities=29% Similarity=0.622 Sum_probs=15.9
Q ss_pred CchhHHHHHHHHHHHHc
Q 012264 126 EIPELGAIRDIFEKKYG 142 (467)
Q Consensus 126 DlPEL~~LR~~f~~KYG 142 (467)
.+.||.++-+.|..|||
T Consensus 14 tvaelaelvk~ledkfg 30 (30)
T d1zavu1 14 TVSELAELVKKLEDKFG 30 (30)
T ss_dssp BHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHhhcC
Confidence 78899999999999998
No 7
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}
Probab=23.19 E-value=47 Score=23.53 Aligned_cols=56 Identities=9% Similarity=0.156 Sum_probs=39.3
Q ss_pred HHHHHHHhHhhhhccCCCChhHHHHHHHHHhhCCCCCCchhHHHHHHHHHHHHcHHHHHHHh
Q 012264 89 FCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAAT 150 (467)
Q Consensus 89 YCELLlaRl~lIek~KeCP~eLkEAIsSLIfAApR~sDlPEL~~LR~~f~~KYGKeFv~aA~ 150 (467)
.|++++..+.-+-....--.++..++-.+. +.+|-+......|..+||..+.....
T Consensus 6 ~C~~~v~~~~~~l~~~~t~~~I~~~l~~~C------~~lp~~~~~C~~~v~~y~~~ii~~l~ 61 (78)
T d1nkla_ 6 SCRKIIQKLEDMVGPQPNEDTVTQAASQVC------DKLKILRGLCKKIMRSFLRRISWDIL 61 (78)
T ss_dssp HHHHHHHHHHHHHCSSCCHHHHHHHHHHHH------HHSCSTHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHcCCccHHHHHHHHHHHH------hcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 477777777766544444566777766654 23455778899999999999887653
No 8
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=22.02 E-value=8.5 Score=28.02 Aligned_cols=27 Identities=26% Similarity=0.572 Sum_probs=23.0
Q ss_pred HhhCCCCCCchhHHHHHHHHHHHHcHH
Q 012264 118 IFAAPRCSEIPELGAIRDIFEKKYGKD 144 (467)
Q Consensus 118 IfAApR~sDlPEL~~LR~~f~~KYGKe 144 (467)
+|-+|+|+-.+.+..+=+.|...|+..
T Consensus 7 ~F~a~wC~~C~~~~p~~~~l~~~~~~~ 33 (85)
T d1nhoa_ 7 VFTSPTCPYCPMAIEVVDEAKKEFGDK 33 (85)
T ss_dssp EESCSSSCCSTTHHHHHHHHHHHHCSS
T ss_pred EEECCCCcchHHHHHHHhhhccccccc
Confidence 589999999999998888888888754
No 9
>d1g73a_ a.7.4.1 (A:) Smac/diablo {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.07 E-value=16 Score=31.37 Aligned_cols=34 Identities=26% Similarity=0.201 Sum_probs=25.4
Q ss_pred cHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCccc
Q 012264 253 DTASAAEAAADS-AKKAVAAAQAAAYLASRDSKQF 286 (467)
Q Consensus 253 Da~~AA~AA~eS-A~~Aa~AArAAaeLs~~~~~~~ 286 (467)
=+.+||+|||-+ |++|+.+||-=.+++.+.-.+.
T Consensus 108 l~e~aAEAAy~sGAeqAsvta~~~lQ~aqsqV~~~ 142 (157)
T d1g73a_ 108 LSEMAAEAAYQTGADQASITARNHIQLVKLQVEEV 142 (157)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHH
Confidence 457889999887 7888898888777776654433
No 10
>d1g2ya_ a.34.2.1 (A:) Hepatocyte nuclear factor 1 (HNF-1), N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=18.04 E-value=62 Score=20.42 Aligned_cols=24 Identities=29% Similarity=0.415 Sum_probs=17.8
Q ss_pred HHHHHHHH-HHHHhcCchhhhhHHH
Q 012264 47 VRQMRRDI-ALLLQSKQDATARIRV 70 (467)
Q Consensus 47 ~kq~RrDI-AqLL~~Gk~e~ARIRV 70 (467)
..|+..|+ |.||+.|-...+.||+
T Consensus 5 lsqlqte~laallesgl~ke~li~a 29 (31)
T d1g2ya_ 5 LSQLQTEMLAALLESGLSKEALIQA 29 (31)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 34555555 8999999988888775
Done!