Query 012268
Match_columns 467
No_of_seqs 155 out of 256
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 06:04:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012268.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012268hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ahq_A ERO1-like protein alpha 100.0 1E-144 4E-149 1130.3 11.3 386 49-443 27-463 (465)
2 3m31_A Endoplasmic oxidoreduct 100.0 2E-134 8E-139 1029.5 22.9 365 63-445 8-385 (388)
3 3qrx_B Melittin; calcium-bindi 24.6 23 0.00078 22.9 0.8 11 389-399 1-11 (26)
4 2wfu_A Probable insulin-like p 20.6 21 0.0007 23.4 -0.1 15 65-79 1-18 (26)
5 2k72_A Matrix metalloproteinas 19.3 14 0.00048 25.3 -1.1 18 103-120 4-21 (37)
6 1pid_A Despentapeptide insulin 18.9 21 0.00072 23.4 -0.3 15 65-79 1-18 (26)
7 4e29_A Chimeric WZZB chain len 18.0 1.3E+02 0.0043 29.1 4.8 40 386-436 24-63 (248)
8 2wfv_A Probable insulin-like p 16.0 27 0.00091 22.9 -0.3 16 64-79 3-21 (26)
9 1igl_A Insulin-like growth fac 12.7 73 0.0025 24.9 1.3 18 63-80 39-59 (67)
10 2k53_A A3DK08 protein; NESG, C 11.0 2.1E+02 0.0072 22.4 3.5 21 370-396 27-47 (76)
No 1
>3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A*
Probab=100.00 E-value=1.3e-144 Score=1130.34 Aligned_cols=386 Identities=42% Similarity=0.785 Sum_probs=307.7
Q ss_pred CCCCcccccCCCCCccccccCcccCHHhHHHhhhhhhhhhhHHhhcCCCceeEeecCCCCCCCCCCCCCCCCCCCccccC
Q 012268 49 PADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCEC 128 (467)
Q Consensus 49 ~~~~~c~c~~~~~~~~g~v~dc~c~~etId~~N~~~l~p~L~~L~~t~fFRyfKVnL~~~CPFW~dd~~C~~~~C~V~~c 128 (467)
+..+.|||+ ++|+|+||||+|+|||++|+.+|+|+|++|+++||||||||||+++||||+|+++|++++|+|++|
T Consensus 27 ~~~~~c~c~-----~~g~v~Dc~c~~etId~~N~~~i~p~L~~L~~t~fFRyfkVnL~k~CPFW~d~~~C~~~~C~V~~c 101 (465)
T 3ahq_A 27 TAAQRCFCQ-----VSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAVKPA 101 (465)
T ss_dssp ----CEEEE-----CSSSSCEEECCHHHHHHHHHHTTHHHHHHHHHSHHHHEEEECCCCCCSSCC---------------
T ss_pred CCCCCcccC-----CCCccccCcCCHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCCCccCCcCCCCCeeecC
Confidence 556789999 999999999999999999997899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccCCCCCC----chhhccCCCccccccccch---hhhcCccccCCC---CcCCCCCCCCCceeeeCCC
Q 012268 129 PETEFPESFKKPFIRGLSSD----DLACQEGKPEAAVDRTLDS---QAFRGWTETDNP---WTHDDETDNAEMTYVNLQL 198 (467)
Q Consensus 129 ~e~eiP~~wr~~~~~~~~~~----~~~c~~~~~~~~vd~~l~~---~~~~~w~~~d~~---~~~~De~~~~~~~YVDLl~ 198 (467)
+|+|||++||++.. +++.. ...|++...++.||++++. ..+.+|.++|++ +|..||+++++++||||++
T Consensus 102 ~e~eiP~~wr~~~~-~~~~~~~~~~~~c~~~~~lg~vd~tls~~~~~~~~~w~~~dd~~~~fC~~dDe~~~~~~YVdLl~ 180 (465)
T 3ahq_A 102 QSDEVPDGIKSASY-KYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDLLL 180 (465)
T ss_dssp ----------------------------CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHTTCC-------CCSCEEEEGGG
T ss_pred CcccCChhhccccc-ccchhhccccccccccccccccccccchhhhhhhhccccccCcccccccccCCCCCCceEEeccc
Confidence 99999999999653 23221 1247666667889998874 578899987653 4554444668999999999
Q ss_pred CCCCCCCCCCCChhhhHHHHhhhcCCCCCC------------------------ccchhHHHHHHHHhhhhhHHHHHHHH
Q 012268 199 NPERYTGYTGPSARRIWDAIYSENCPTYPS------------------------KQLCQEERILYKLISGLHSSISIHIA 254 (467)
Q Consensus 199 NPERfTGY~G~~A~rIW~aIY~ENCF~~~~------------------------~~~ClEkrvfYRLISGLHaSIs~Hl~ 254 (467)
||||||||+|++|+|||++||+||||++.+ +++|+|||||||||||||||||||||
T Consensus 181 NPEryTGY~G~~A~rIW~aIY~ENCF~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ClEkrvFyRLISGLHaSIs~Hl~ 260 (465)
T 3ahq_A 181 NPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVHLS 260 (465)
T ss_dssp SCCCCCCCCHHHHHHHHHHHHTTCCBCC---------------------------CCCBCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcccCCCCCcHHHHHHHHHHHhccCccccccccCccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997542 68999999999999999999999999
Q ss_pred hhhcccc--ccCcCCCCHHHHHHHh------hccccchhhHHHHHHHHHHHHHHHHhhhhhhcc--CCCCccccHHHHHH
Q 012268 255 ADYLLDE--ANNLWGQNLTLMYDRV------LRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEY--ETGNPMEDLKTQSL 324 (467)
Q Consensus 255 ~~Yl~d~--~~~~w~pNl~~F~~Rv------~~~PeRl~NLYF~Y~lvLRAl~Ka~p~L~~~~f--~tg~~~eD~~t~~l 324 (467)
++|++++ .++.|+||+++|++|| |+|||||+||||+|+||||||+||+|||.++.| +|||..+|.+|+++
T Consensus 261 ~~Yl~~~~~~~~~W~pNl~~F~~R~~~~~t~G~~PeRl~NLYF~Y~lvLRAl~K~~p~l~~~~y~~~tGn~~eD~~tk~~ 340 (465)
T 3ahq_A 261 ARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENKML 340 (465)
T ss_dssp HTEEEEECSSCEEEECCHHHHHHHHCHHHHTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHSTTCCCCCSCSSHHHHHHHH
T ss_pred HHHhccccccCCCcCCCHHHHHHHhccccccCCChHHHHhHHHHHHHHHHHHHHhhhhhhhccccccCCChhhhHHHHHH
Confidence 9999765 2789999999999997 579999999999999999999999999997666 99999999999999
Q ss_pred HHHHhccccccccCCCCCccccccCCC--CcchhHHHHHHhhhhhhhhhcCccCCcccccchhhhhHHHHHHHHhhccCC
Q 012268 325 MKQLLYNPQLQAACPLPFDEAKLWKGQ--RGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNG 402 (467)
Q Consensus 325 v~~Ll~~~~l~~sc~~~FDE~~lF~~~--~~~~LKeefr~~FrNISrIMDCVgCeKCRLWGKLQt~GlgTALKILF~~d~ 402 (467)
|.+|++.. .+||.+|||+.||++. .+.+||+|||+|||||||||||||||||||||||||+||||||||||+.++
T Consensus 341 l~~ll~~~---~s~p~~FDE~~lF~~~~~~~~~LKeeFr~~FrNISrIMDCVgCdKCRLWGKLQt~GlgTALKILF~~~~ 417 (465)
T 3ahq_A 341 LLEILHEI---KSFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSEKL 417 (465)
T ss_dssp HHHHHHHH---HHSCEEECTTCTTSCCTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHH---HhCCCccChHhhcCCcchhHHHHHHHHHHHHHhHhHHhcCCccchhhhhhHHHHHHHHHHHHHHhccCc
Confidence 99999853 4799999999999984 678999999999999999999999999999999999999999999998765
Q ss_pred Ccc-----ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012268 403 EEH-----LSQTLQLQRNEVIALMNLLNRLSESVKLVHEMGPAAEK 443 (467)
Q Consensus 403 ~~~-----~~~~~~L~R~ElVALiNt~~RlS~SI~~v~~f~~~~~~ 443 (467)
.++ ...+++|+|+|||||||||+|||+||++|++|+.|++.
T Consensus 418 ~~~~~~~~~~~~~~L~R~ElVALiNtf~RlS~SI~~v~~F~~~~~~ 463 (465)
T 3ahq_A 418 IANMPESGPSYEFHLTRQEIVSLFNAFGRISTSVKELENFRNLLQN 463 (465)
T ss_dssp HHTCCSSSCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 321 12357899999999999999999999999999998863
No 2
>3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} SCOP: a.227.1.1 PDB: 1rp4_A* 1rq1_A* 3nvj_A*
Probab=100.00 E-value=2.3e-134 Score=1029.48 Aligned_cols=365 Identities=31% Similarity=0.628 Sum_probs=307.1
Q ss_pred ccccccCcccCHHhHHHhhhhhhhhhhHHhhcCCCceeEeecCCCCCCCCCC-CCCCCCCCCccccCCC-CCCCCCCCCc
Q 012268 63 YSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPD-DGMCRLRDCSVCECPE-TEFPESFKKP 140 (467)
Q Consensus 63 ~~g~v~dc~c~~etId~~N~~~l~p~L~~L~~t~fFRyfKVnL~~~CPFW~d-d~~C~~~~C~V~~c~e-~eiP~~wr~~ 140 (467)
-+|.|. |++|+|||++|.+ |+|+|++||+|||||||||||+++||||+| +++|++++|+|++|++ ++||++||++
T Consensus 8 ~~~~~~--~~~~~~i~~~N~~-i~p~L~~L~~tdfFryfKVnL~k~CPFW~d~~~~C~~~~CaV~~cd~~~~iP~~w~~~ 84 (388)
T 3m31_A 8 SSGLVP--RGSFNELNAINEN-IRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPE 84 (388)
T ss_dssp ---------CHHHHHHHHHHH-HHHHHHHHTTSTTTSEEEEESCCCCSSSCCSSCCCCTTTTBCC----CTTSCGGGSHH
T ss_pred cCCCCC--CCCHHHHHHHHHH-HHHHHHHHhcCCCceeeeecCCCCCCCCCCcCCCCCCCCCeeeeCCCcccCchhhccc
Confidence 467776 5699999999998 899999999999999999999999999998 7999999999999987 9999999998
Q ss_pred ccCCCCCCc--------hhhccCCCccccccccchhhhcCccccCCCCcCCCCCCCCCceeeeCCCCCCCCCCCCCCChh
Q 012268 141 FIRGLSSDD--------LACQEGKPEAAVDRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSAR 212 (467)
Q Consensus 141 ~~~~~~~~~--------~~c~~~~~~~~vd~~l~~~~~~~w~~~d~~~~~~De~~~~~~~YVDLl~NPERfTGY~G~~A~ 212 (467)
.+++++... ..|.........++.+ .+.+.++.||+.||+++++++||||++||||||||+|++|+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~------~~~d~~~~~c~~dD~~~~~~~YVdLl~NPEryTGY~G~~a~ 158 (388)
T 3m31_A 85 ILGSFNNDTMKEADDSDDECKFLDQLAQTSKKP------VDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAG 158 (388)
T ss_dssp HHTCCCTTTCEECCTTCGGGSBHHHHC-------------------CHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHH
T ss_pred cccCccccccccccccchhhhhhhhhccccccc------ccccCcCCeecccccCCCCceEeecccCCccccCCCCCchH
Confidence 877665321 1122100001111111 11233556787666678999999999999999999999999
Q ss_pred hhHHHHhhhcCCCCCCccchhHHHHHHHHhhhhhHHHHHHHHhhhccccccCcCCCCHHHHHHHhhccccchhhHHHHHH
Q 012268 213 RIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFL 292 (467)
Q Consensus 213 rIW~aIY~ENCF~~~~~~~ClEkrvfYRLISGLHaSIs~Hl~~~Yl~d~~~~~w~pNl~~F~~Rv~~~PeRl~NLYF~Y~ 292 (467)
+||++||+||||+++.+++|+|||+||||||||||||+||||++|+ ++.++.|+||+++|++|||+|||||+||||+|+
T Consensus 159 ~IW~aIY~ENCF~~~~~~~ClEkrvFyrLISGlHaSIs~Hl~~~yl-~~~~~~w~pNl~~F~~R~g~~P~Rl~NLYF~Y~ 237 (388)
T 3m31_A 159 QIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASIGTHLSKEYL-NTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYA 237 (388)
T ss_dssp HHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHSEE-CTTTCCEECCHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCcccccHHHHHHHHHhhhhHHHHHHHHHHHHh-CccCCCcCCCHHHHHHHHccchhHHHHHHHHHH
Confidence 9999999999999988999999999999999999999999999998 556789999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhccCCCCccccHHHHHHHHHHhccccccccCCCCCccccccCCCCcchhHHHHHHhhhhhhhhhc
Q 012268 293 FVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMD 372 (467)
Q Consensus 293 lvLRAl~Ka~p~L~~~~f~tg~~~eD~~t~~lv~~Ll~~~~l~~sc~~~FDE~~lF~~~~~~~LKeefr~~FrNISrIMD 372 (467)
++||||+||+|||.+++|+| .+|..|+++|.+|++. .+|.+|||+.||+++.+..||+|||+||||||||||
T Consensus 238 l~lRAl~K~~p~l~~~~~~~---~~d~d~k~~~~~l~~~-----~~~~~FDE~~lF~~~~a~~LKeefr~~FrNISrIMD 309 (388)
T 3m31_A 238 VVAKALWKIQPYLPEFSFAD---LVNKEIKNKMDNVISQ-----LDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMD 309 (388)
T ss_dssp HHHHHHHHHGGGCCCSCSSC---HHHHHHHHHHHHHHHT-----TCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhhccCCc---cccHHHHHHHHHHHHH-----hCcCCCCHHHhcCCCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998 4678888899999864 357799999999999999999999999999999999
Q ss_pred CccCCcccccchhhhhHHHHHHHHhhccCCCcccccc---ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012268 373 CVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQT---LQLQRNEVIALMNLLNRLSESVKLVHEMGPAAEKVV 445 (467)
Q Consensus 373 CVgCeKCRLWGKLQt~GlgTALKILF~~d~~~~~~~~---~~L~R~ElVALiNt~~RlS~SI~~v~~f~~~~~~~~ 445 (467)
|||||||||||||||+||||||||||+.++.++.... .+|+|+|||||||||+|||+||++|++|+.|+++-+
T Consensus 310 CVgCeKCRLWGKLQt~GlgTALKILF~~~~~~~~~~~~~~~~L~R~EiVAL~Ntf~rlS~SI~~i~~F~~~~~~~~ 385 (388)
T 3m31_A 310 CVQCDRCRLWGKIQTTGYATALKILFEINDADEFTKQHIVGKLTKYELIALLQTFGRLSESIESVNMFEKMYGKRL 385 (388)
T ss_dssp GCCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcchheeehhhhHHHHHHHHHHHhcCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998765432212 289999999999999999999999999999996543
No 3
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=24.63 E-value=23 Score=22.95 Aligned_cols=11 Identities=45% Similarity=0.918 Sum_probs=9.3
Q ss_pred HHHHHHHHhhc
Q 012268 389 GLGTALKILFS 399 (467)
Q Consensus 389 GlgTALKILF~ 399 (467)
|+|.|||+|-.
T Consensus 1 giGa~LKVLa~ 11 (26)
T 3qrx_B 1 GIGAVLKVLTT 11 (26)
T ss_pred CchHHHHHHHc
Confidence 78999999953
No 4
>2wfu_A Probable insulin-like peptide 5 A chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster}
Probab=20.57 E-value=21 Score=23.43 Aligned_cols=15 Identities=47% Similarity=1.360 Sum_probs=11.0
Q ss_pred ccccCcc---cCHHhHHH
Q 012268 65 GVVEDCC---CDYETVNQ 79 (467)
Q Consensus 65 g~v~dc~---c~~etId~ 79 (467)
|+||.|| |++.++.+
T Consensus 1 GIVdeCC~~~Cs~~~L~~ 18 (26)
T 2wfu_A 1 GVVDSCCRNSCSFSTLRA 18 (26)
T ss_dssp CHHHHHTSSCBCHHHHHH
T ss_pred CcchhhcCCcCCHHHHHH
Confidence 7888888 77776654
No 5
>2k72_A Matrix metalloproteinase-23; toxin, metalloprotease, MMP23, potassium channel, cleavage on PAIR of basic residues, glycoprotein, hydrolase; NMR {Synthetic}
Probab=19.35 E-value=14 Score=25.28 Aligned_cols=18 Identities=22% Similarity=0.728 Sum_probs=14.8
Q ss_pred ecCCCCCCCCCCCCCCCC
Q 012268 103 VKLWCDCPFWPDDGMCRL 120 (467)
Q Consensus 103 VnL~~~CPFW~dd~~C~~ 120 (467)
+|....|+||...|.|..
T Consensus 4 ~D~~~~C~~Wa~~G~C~~ 21 (37)
T 2k72_A 4 LDRIFVCTSWARKGFCDV 21 (37)
T ss_dssp CCCCSCHHHHHTTTTTTT
T ss_pred cCcchhhHHHHhCCccCC
Confidence 466779999999999874
No 6
>1pid_A Despentapeptide insulin; hormone, glucose metabolism; 1.30A {Bos taurus} SCOP: g.1.1.1 PDB: 1bph_A 1aph_A 1dph_A 1cph_A 2a3g_A 2bn1_A 2ins_A 2zp6_A 4e7t_A 4e7u_A 4e7v_A 2bn3_A 2qiu_A 2r34_A 2r35_A 2r36_A 1a7f_A 1ai0_A* 1aiy_A* 1b17_A ...
Probab=18.86 E-value=21 Score=23.40 Aligned_cols=15 Identities=40% Similarity=1.183 Sum_probs=10.8
Q ss_pred ccccCcc---cCHHhHHH
Q 012268 65 GVVEDCC---CDYETVNQ 79 (467)
Q Consensus 65 g~v~dc~---c~~etId~ 79 (467)
|+||.|| |++..+++
T Consensus 1 GIVdeCC~~~Cs~~~L~~ 18 (26)
T 1pid_A 1 GIVEQCCASVCSLYQLEN 18 (26)
T ss_dssp CHHHHHTTSCCCHHHHHT
T ss_pred CcchhhCCCcCCHHHHHH
Confidence 7888888 66666654
No 7
>4e29_A Chimeric WZZB chain length determinant protein; regulation of LPS O-antigen chain length, inner membran membrane protein; 1.60A {Shigella flexneri} PDB: 4e2c_A 4e2h_A 3b8p_A
Probab=18.02 E-value=1.3e+02 Score=29.15 Aligned_cols=40 Identities=18% Similarity=0.434 Sum_probs=29.2
Q ss_pred hhhHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHHHHHHH
Q 012268 386 QVLGLGTALKILFSVNGEEHLSQTLQLQRNEVIALMNLLNRLSESVKLVHE 436 (467)
Q Consensus 386 Qt~GlgTALKILF~~d~~~~~~~~~~L~R~ElVALiNt~~RlS~SI~~v~~ 436 (467)
|+.+|-+||.|+|..+..+ . .+|- -..|+||+.++.+.-+
T Consensus 24 q~~~y~~a~~~~~~~~~~~----~-----~~~~--~~~~~~f~~~~~a~~~ 63 (248)
T 4e29_A 24 QIAGYNNAMNVIYGQAAPK----V-----SDLQ--ETLIGRFSSAFSALAE 63 (248)
T ss_dssp GGHHHHHHHHHHHGGGSCC----H-----HHHH--HHHHHHHHHHHHHHHH
T ss_pred hhccccchhhhcccCCCCc----h-----HHHH--HHHHHHHHHHHHHHHH
Confidence 8899999999999874321 1 3443 5678999998877654
No 8
>2wfv_A Probable insulin-like peptide 5 A chain; signaling protein, cleavage on PAIR of basic residues; 1.85A {Drosophila melanogaster}
Probab=15.99 E-value=27 Score=22.88 Aligned_cols=16 Identities=44% Similarity=1.271 Sum_probs=11.9
Q ss_pred cccccCcc---cCHHhHHH
Q 012268 64 SGVVEDCC---CDYETVNQ 79 (467)
Q Consensus 64 ~g~v~dc~---c~~etId~ 79 (467)
.|+||.|| |++.++.+
T Consensus 3 rGIvdECC~~~Ct~~~L~~ 21 (26)
T 2wfv_A 3 RGVVDSCCRNSCSFSTLRA 21 (26)
T ss_dssp CHHHHHHTSSCBCHHHHHH
T ss_pred CcchhhhcCCcCCHHHHHH
Confidence 59999998 66766653
No 9
>1igl_A Insulin-like growth factor II; NMR {Homo sapiens} SCOP: g.1.1.1 PDB: 2l29_B 2v5p_C* 3e4z_C 3kr3_D
Probab=12.72 E-value=73 Score=24.90 Aligned_cols=18 Identities=39% Similarity=1.071 Sum_probs=14.3
Q ss_pred ccccccCcc---cCHHhHHHh
Q 012268 63 YSGVVEDCC---CDYETVNQL 80 (467)
Q Consensus 63 ~~g~v~dc~---c~~etId~~ 80 (467)
-.|+||.|| |++..+.+-
T Consensus 39 ~rGIVdECC~~~Ct~~~L~~Y 59 (67)
T 1igl_A 39 SRGIVEECCFRSCDLALLETY 59 (67)
T ss_dssp CCCTTCCCCCSCCCSHHHHHH
T ss_pred cCCcHHHhcCCCCCHHHHHHH
Confidence 479999997 888877653
No 10
>2k53_A A3DK08 protein; NESG, CMR9, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium thermocellum atcc 27405}
Probab=11.04 E-value=2.1e+02 Score=22.39 Aligned_cols=21 Identities=24% Similarity=0.512 Sum_probs=13.4
Q ss_pred hhcCccCCcccccchhhhhHHHHHHHH
Q 012268 370 LMDCVGCEKCRLWGKLQVLGLGTALKI 396 (467)
Q Consensus 370 IMDCVgCeKCRLWGKLQt~GlgTALKI 396 (467)
-|||+||.- ++-.+ |..|.+.
T Consensus 27 G~~C~gC~~----a~~~t--LeeA~~~ 47 (76)
T 2k53_A 27 GMHCLGCPS----SMGES--IEDACAV 47 (76)
T ss_dssp TCCCCSSCC----CCCSB--HHHHHHH
T ss_pred CCCCCCCCc----ccccc--HHHHHHH
Confidence 588999975 34444 4566654
Done!