BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012275
(467 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4PIP8|PNS1_USTMA Protein PNS1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=PNS1
PE=3 SV=1
Length = 602
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 16/223 (7%)
Query: 220 ILLSLAWSMHVIKNVLLVTISRVRYIHFAYGADMETEIA---FRDTIKYLMGSVYIGSVF 276
I+ + W VIKN+ T++ + + + Y A+ A FR ++ Y +GS+ GS+
Sbjct: 354 IVFAYYWISEVIKNIAFTTVAGIFGVAY-YNANKVANAAWGAFRRSMTYSLGSICFGSLI 412
Query: 277 VPIFG---SIWGSARTINAIAGERDEFLFSC-ADCYSAVASTLAAHGNRWGFVHVGVYNK 332
V I +++ ++ A G+ + +C A C + L + NR+ ++++ +Y
Sbjct: 413 VAILDLLRALFNILQSQAASDGDMTGQILACVAGCCVSCIQGLVDYFNRYAYINIALYGN 472
Query: 333 GFIQASVDTWEMFKRAGMETLINSDLTGAFCFFSGVAGGAVSALVGGTWA-------LAV 385
G+I A+ +TW + K G++ +IN L G ++AL + L
Sbjct: 473 GYITAAKETWALLKDRGIDAIINDSLVNIVFNCGAFIIGLLTALFAFIYEQLTNPRYLQN 532
Query: 386 HKSYATEVSIYAFLIGYFMFRTATAWPLAC-VSAYYVAYAENP 427
Y + V + AF +G+ + + A +A VS Y+VA AE+P
Sbjct: 533 DAGYYSIVLLVAFGLGFNIALSVGAGSIASGVSTYFVALAEDP 575
>sp|Q4I8E9|PNS1_GIBZE Protein PNS1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=PNS1 PE=3 SV=1
Length = 538
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 121/308 (39%), Gaps = 42/308 (13%)
Query: 111 MRICFWLGPLMTCAFGILLLVINSAASLSTGAV---AIIAGVIQSIYTCWVNPRFEYAGK 167
M CFW + F L+L S G V ++I G+I + ++ W YA
Sbjct: 204 MAFCFWTW-ISRIPFSALMLKTTIDVSKKYGHVYLVSLIGGIIATAFSAW------YAIT 256
Query: 168 ILSVSAAFPPARTAILVTLSIILSAVYSSFLVSGIGGATAIGTTLDILFIAVILLSLAWS 227
++ + + PA+ S G G IG IA I ++ W
Sbjct: 257 LVGIYVKYQPAQDN-------------PSCADGGCGKGKVIG------LIAFITFAMYWF 297
Query: 228 MHVIKNVLLVTISRVR---YIHFAYGADMETEIAFRDTIKYLMGSVYIGSVFVPI---FG 281
+KN + TI+ V Y + T + + + Y GS+ +GS+ V I
Sbjct: 298 SEWLKNTIHTTIAGVYGSWYFNPHNFPKDATRASAKRALTYSFGSIALGSLLVAIIQFLR 357
Query: 282 SIWGSARTINAIAGERDEF-LFSCADCYSAVASTLAAHGNRWGFVHVGVYNKGFIQASVD 340
I +AR G + +F C C + NR+ F H+ +Y K + A+ D
Sbjct: 358 QICNAARNQEGADGSFVGYAIFCCISCLLGLLEWAVEFINRYAFCHIALYGKAYFAAAKD 417
Query: 341 TWEMFKRAGMETLINSDLTGAFCFFSGVAGGAVSALVGGTWALAVHKSYATE------VS 394
TW+M K G++ LIN L G F + AL+ + +Y ++ V
Sbjct: 418 TWKMIKDRGIDALINDCLIGPVLSFGALFIAYACALLAYLYLYFTDPAYNSDGQYTAVVM 477
Query: 395 IYAFLIGY 402
++FLIG+
Sbjct: 478 AFSFLIGF 485
>sp|P0CM92|PNS1_CRYNJ Protein PNS1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=PNS1 PE=3 SV=1
Length = 551
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 19/226 (8%)
Query: 222 LSLAWSMHVIKNVLLVTISRVRYIHFAY------GADMETE---IAFRDTIKYLMGSVYI 272
S W VI NV+L T++ + + Y G + +AF +GS+
Sbjct: 300 FSYLWLSQVIGNVILCTLAGGVFGGWYYYGPRTPGGGVPKRASLLAFVRASTLSLGSIAF 359
Query: 273 GSVFVPIFGSIWGSARTINAI-AGERD---EFLFSCADCYSAVASTLAAHGNRWGFVHVG 328
GS+ V I + + AG+ D L A C + + N++ ++ +
Sbjct: 360 GSLLVTILELLRLILQLFRQYEAGQGDMIGSILICIAQCCIGCIQWMVEYFNKYAYIEIA 419
Query: 329 VYNKGFIQASVDTWEMFKRAGMETLINSDLTGAFCFFSGVAGGAVSALVGGTWALAVHKS 388
+Y K +I A+ DTW + K G++ L+N L G + G + A++G + H +
Sbjct: 420 LYGKSYIPAAKDTWRLLKDRGIDALVNDSLVGTALMWGAYINGFLCAVLGYFYLRFTHPA 479
Query: 389 YATE------VSIYAFLIGYFMFRTATAWPLACVSAYYVAYAENPL 428
Y ++ V +++FLIG T + A VS +V E+P+
Sbjct: 480 YNSDGQYSAPVILFSFLIGLNESFTVGSAIDAGVSTIFVGLGEDPM 525
>sp|P0CM93|PNS1_CRYNB Protein PNS1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=PNS1 PE=3 SV=1
Length = 551
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 19/226 (8%)
Query: 222 LSLAWSMHVIKNVLLVTISRVRYIHFAY------GADMETE---IAFRDTIKYLMGSVYI 272
S W VI NV+L T++ + + Y G + +AF +GS+
Sbjct: 300 FSYLWLSQVIGNVILCTLAGGVFGGWYYYGPRTPGGGVPKRASLLAFVRASTLSLGSIAF 359
Query: 273 GSVFVPIFGSIWGSARTINAI-AGERD---EFLFSCADCYSAVASTLAAHGNRWGFVHVG 328
GS+ V I + + AG+ D L A C + + N++ ++ +
Sbjct: 360 GSLLVTILELLRLILQLFRQYEAGQGDMIGSILICIAQCCIGCIQWMVEYFNKYAYIEIA 419
Query: 329 VYNKGFIQASVDTWEMFKRAGMETLINSDLTGAFCFFSGVAGGAVSALVGGTWALAVHKS 388
+Y K +I A+ DTW + K G++ L+N L G + G + A++G + H +
Sbjct: 420 LYGKSYIPAAKDTWRLLKDRGIDALVNDSLVGTALMWGAYINGFLCAVLGYFYLRFTHPA 479
Query: 389 YATE------VSIYAFLIGYFMFRTATAWPLACVSAYYVAYAENPL 428
Y ++ V +++FLIG T + A VS +V E+P+
Sbjct: 480 YNSDGQYSAPVILFSFLIGLNESFTVGSAIDAGVSTIFVGLGEDPM 525
>sp|Q4WYG7|PNS1_ASPFU Protein pns1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293
/ CBS 101355 / FGSC A1100) GN=pns1 PE=3 SV=1
Length = 537
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 20/163 (12%)
Query: 254 ETEIAFRDTIKYLMGSVYIGSVFVPIFGSIWGSARTINAIAGERDE---------FLFSC 304
T AFR Y GSV GS+ + I + R ++A +R+E +F
Sbjct: 325 STRGAFRRATTYSFGSVSFGSLIIAIINML----RQACSVA-QRNEAAEGSIVGSIMFWI 379
Query: 305 ADCYSAVASTLAAHGNRWGFVHVGVYNKGFIQASVDTWEMFKRAGMETLINSDLTGAFCF 364
C+ A+ L NR+ F H+ +Y K +I A+ DTW M + G++ L+N L G
Sbjct: 380 LGCFIAILDWLVTLFNRYAFCHIALYGKAYIPAAKDTWTMMRDRGIDALVNDCLIGPVLT 439
Query: 365 FSGVAGGAVSALVGGTWALAVHKSYATE------VSIYAFLIG 401
V V AL+ + SY + + +AF+IG
Sbjct: 440 MGSVFVSYVCALLAYLYLQFTKPSYNADGNFTAVIMAFAFVIG 482
>sp|Q870V7|PNS1_NEUCR Protein PNS1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=pns-1 PE=3 SV=1
Length = 554
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 13/227 (5%)
Query: 214 ILFIAVILLSLAWSMHVIKNVLLVTISRVRYIHFAYGADMETEI---AFRDTIKYLMGSV 270
I I I + W +KN + T++ + + + T++ A + ++ Y GS+
Sbjct: 301 IGLIVFITFAGYWISEWLKNTIHTTVAGIYGSWYFNSRNYPTKVTRGALKRSLTYSFGSI 360
Query: 271 YIGSVFVPIFGSIWGSARTINAIAGERDEFL----FSCADCYSAVASTLAAHGNRWGFVH 326
+GS+F+ I I A+ A + + L + C + L NR+ F H
Sbjct: 361 SLGSLFIAIINLIRQLAQAAQQNAAQEGDILGTILWCIFGCLIGILDWLVEFINRYAFCH 420
Query: 327 VGVYNKGFIQASVDTWEMFKRAGMETLINSDLTGAFCFFSGVAGGAVSALVGGTWALAVH 386
+ +Y K + A+ DTW+M K G++ LIN L G F L+ + +
Sbjct: 421 IALYGKAYFAAAKDTWKMVKDRGIDALINECLIGPVLTFGATFVAYACGLIAYLYMVYTK 480
Query: 387 KSYATE------VSIYAFLIGYFMFRTATAWPLACVSAYYVAYAENP 427
+Y V +AFLIG + T + + +VA A +P
Sbjct: 481 PAYNDGGGFTPVVVAFAFLIGLQVCNVFTTPLTSGIDTIFVAMAWDP 527
>sp|Q6BIV4|PNS1_DEBHA Protein PNS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=PNS1 PE=3 SV=2
Length = 513
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 30/248 (12%)
Query: 229 HVIKNVLLVTISRVRYIHFAYGADMETEI------AFRDTIKYLMGSVYIGSVFVPIFGS 282
VIKNV+ +TI+ + + + E AF+ + Y GSV GS+ V I
Sbjct: 270 EVIKNVIHITIAGIYGTWYYLSNSDQGEPKHPALGAFKRAMTYCFGSVCFGSLIVSIIQL 329
Query: 283 IWGSARTINAIA-GERDEFLFSCADCYSAVAST-------LAAHGNRWGFVHVGVYNKGF 334
I + + A G D +CA C + + + N + + +V +Y K +
Sbjct: 330 IRSFVQILKQNAFGSGD----NCAGCGFLILDFVLGFIDWIVRYFNHYAYCYVALYGKSY 385
Query: 335 IQASVDTWEMFKRAGMETLINSDLTGAFCFFSGVAGGAVSALVGGTWALAVHKSYATEVS 394
++++ DT+++ + GM+ LIN + G V AL+ + +Y + +
Sbjct: 386 LKSARDTFDLIRFKGMDALINDCFINTSLNLYSMFVGYVVALLAYFYLKFTDPAYNSSGT 445
Query: 395 IYA------FLIGYFMFRTATAWPLACVSAYYVAYAENPL------HPRFDSTIPARIQE 442
YA FLI + R A + +S ++VA A++P RFD Q
Sbjct: 446 FYAPVVAFSFLISGQITRIALTVISSGISTFFVALAKDPEVFQMTNRDRFDEIFRNYPQV 505
Query: 443 LQRYQNEQ 450
LQ+ ++
Sbjct: 506 LQKITSDH 513
>sp|Q6C938|PNS1_YARLI Protein PNS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=PNS1 PE=3 SV=1
Length = 571
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 37/227 (16%)
Query: 203 GGATAIGTTLDILFIAVILLSLAWSMHVIKNVLLVTISRVRYIHFAYGADMETEI----- 257
GG+ + G + ++ A+ + VIKNV+ VTIS V Y + Y + + +
Sbjct: 306 GGSCSNGKLIGLILFAI--FCGYYLTEVIKNVIHVTISGV-YGSWYYCSKSDQGMPKHAA 362
Query: 258 --AFRDTIKYLMGSVYIGSVFVPIFGSIWGSARTINAIAGERDE----FLFSCADCYSAV 311
+FR + Y +GS+ +GS+ V I I + A + + L C V
Sbjct: 363 MSSFRRAVTYSLGSISLGSLIVSIINFIRQILSVLQQDARQSGDTLATVLLCFVQCCFGV 422
Query: 312 ASTLAAHGNRWGFVHVGVYNKGFIQASVDTWEMFKRAGMETLINSDLTGAF--------- 362
L + N + + ++ +Y K ++ ++ TW++ + G++ ++N L G+
Sbjct: 423 LDWLVTYFNHYAYSYIALYGKAYVPSAKATWKLMQTRGIDAMVNDSLIGSVLSFGASFVA 482
Query: 363 --------CFFS------GVAGGAVSALVGGTWALAVHKSYATEVSI 395
CF GG + +VG + +A+ S T VS+
Sbjct: 483 YAAALVAYCFLKYTDPSYNSGGGFYAPVVGLAFVIALQVSNITNVSL 529
>sp|Q869R1|CTLHB_DICDI CTL-like protein DDB_G0274487 OS=Dictyostelium discoideum
GN=DDB_G0274487 PE=3 SV=1
Length = 555
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 27/235 (11%)
Query: 207 AIGTTLDILFIAVILLSLAWSMHVIKNVLLVTISRVRYI-HFAYGAD------METEIAF 259
AI T ++I + +L W HVIKN L T+S + +F G + T +
Sbjct: 313 AIQTCINIYLV----FTLYWVFHVIKNTLHTTVSGLLATWYFCSGPNGVGMPHNPTLGSA 368
Query: 260 RDTIKYLMGSVYIGSVFVPIFGSI-WGSARTINA--IAGERDEFLFSCADCYSAVASTLA 316
R + GS+ GS+ + + ++ + S IN + + ++F +C ++ S++
Sbjct: 369 RRALTTSFGSICFGSLIISLIETLRYLSQMMINNRNVVVKIIGYIF---NCILSMLSSIV 425
Query: 317 AHGNRWGFVHVGVYNKGFIQASVDTWEMFKRAGMETLINSDLTGAFCFFSGVAGGAVSAL 376
N + F HV +Y K F ++ T+ MF+ T+IN + G G+ + ++
Sbjct: 426 QFFNTYAFTHVAIYGKSFCDSAKSTFTMFENRLGSTIINDNFVGTTIAIGGLVASLLLSI 485
Query: 377 VGGTWALAVHKSYATEVSIY----AFLIGYFMFRTATAWPLACVSAYYVAYAENP 427
+G ++ ++S+Y A IGY + T + + +V Y P
Sbjct: 486 LGALISIPF------DMSVYGGALALFIGYLVIITNLEVVYSSTISLFVCYVMEP 534
>sp|Q6FLC9|PNS1_CANGA Protein PNS1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=PNS1 PE=3 SV=1
Length = 557
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 26/238 (10%)
Query: 229 HVIKNVLLVTISRV-RYIHFAYGADMETEI-----AFRDTIKYLMGSVYIGSVFVPI--- 279
VI+NV+ T+S V ++ Y +D AF+ + Y GS+ GS+ V I
Sbjct: 311 EVIRNVMHCTVSGVFGSWYYRYKSDQGMPKWPAMGAFKRAMTYSFGSICFGSLIVSIIET 370
Query: 280 ------FGSIWGSARTINAIAGERDEFLFSCADCYSAVASTLAAHGNRWGFVHVGVYNKG 333
G A T NA +F D +A + N + + + +Y K
Sbjct: 371 FRQLLQLGKQAAIASTDNA---NWIRIIFWLIDMLVGFIQWIAQYFNHYAYCIIALYGKP 427
Query: 334 FIQASVDTWEMFKRAGMETLINSDLTGAFCFFSGVAGGAVSALVGGTWALAVHKSYATE- 392
+++A+ TW MF+ G++ LIN +L F + +S L + Y ++
Sbjct: 428 YLKAAKQTWYMFREKGIDALINDNLVNVALGFYSLFASYMSCLFAFLYLRFTKPGYNSDG 487
Query: 393 -----VSIYAFLIGYFMFRTATAWPLACVSAYYVAYAENPLHPRFDSTIPARIQELQR 445
+ +AF+I + A + + ++ A +P F + P R E+ R
Sbjct: 488 DFNAPLMAFAFVIALQLTNIANETIRSGCATFFTALGHDP--EVFQAQYPDRFDEIFR 543
>sp|Q75EG5|PNS1_ASHGO Protein PNS1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=PNS1 PE=3 SV=1
Length = 553
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 117/293 (39%), Gaps = 22/293 (7%)
Query: 171 VSAAFPPARTAILVTLSIILSAVYSSFLVSGIGGATAIGTTLDILFIAVILLSLAWSMHV 230
VSAAF + +LV I + GG+ + G + IL ++ + V
Sbjct: 251 VSAAFSVIFSVVLVATYIKYDPKSENGGCDVSGGSCSRGKLIGIL--VLVFFCGFYISEV 308
Query: 231 IKNVLLVTISRVR---YIHFAYGADMETEIAFRDTIKYL---MGSVYIGSVFVPIFGSIW 284
I+NV+ TI+ + Y M AF + L GS+ GS+ V + +
Sbjct: 309 IRNVIHCTIAGIYGCWYYFSKSDQGMPRWPAFGSLKRALTTSFGSICFGSLIVSLIQLLR 368
Query: 285 GSARTINA--IAGERDEFLFSCA----DCYSAVASTLAAHGNRWGFVHVGVYNKGFIQAS 338
+ + I+G D C D V +A + N + + + +Y K +++A+
Sbjct: 369 QIIQLLRNGIISGISDSGWMQCLWLILDAVVGVFEWMAEYFNHYAYCFIALYGKPYLRAA 428
Query: 339 VDTWEMFKRAGMETLINSDLTGAFCFFSGVAGGAVSALVGGTWALAVHKSYATE------ 392
+TW M + G++ LIN +L F + G +AL + Y +
Sbjct: 429 KETWHMLREKGIDALINDNLINLALGFYTLFVGYTTALFSYLFLRFTKPDYNSGGGFNAV 488
Query: 393 VSIYAFLIGYFMFRTATAWPLACVSAYYVAYAENPLHPRFDSTIPARIQELQR 445
+ ++FLI + AT + + ++VA +P F + P R E+ R
Sbjct: 489 LMAFSFLIAIQLTHVATETIRSGTATFFVALGNDP--EIFRVSYPQRFDEIFR 539
>sp|Q6CY85|PNS1_KLULA Protein PNS1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PNS1 PE=3
SV=1
Length = 553
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 123/291 (42%), Gaps = 28/291 (9%)
Query: 180 TAILVTLSIILSAVYSSF--LVSGIGGATAIGTTLDILFIAVILLSL---AWSMHVIKNV 234
TA + S ++ A Y + + G +T G+ + I +++L + VI+NV
Sbjct: 252 TAFSILFSAVIVATYMKYDDKANNPGCSTNGGSCSNAKLIGLLVLVFFCGYYIAEVIRNV 311
Query: 235 LLVTISRVRYIHFAYGADMETEI-------AFRDTIKYLMGSVYIGSVFVPIFGSIWGSA 287
+ T+S + + + Y + + + A + ++ Y GS+ GS+ V I ++
Sbjct: 312 IHCTVSGI-FGAWYYFSKSDQGMPKWPGFGALKRSLTYSFGSICFGSLIVTIIETLKAVL 370
Query: 288 R-TINAI--AGERDEFLFSC----ADCYSAVASTLAAHGNRWGFVHVGVYNKGFIQASVD 340
R ++ + G D C A+ + LA + N + +V + +Y K +++A+ +
Sbjct: 371 RLAVDGVMGGGGADNGWMQCLALIANWIFSFLEWLARYFNHYAYVFIALYGKPYLRAAKE 430
Query: 341 TWEMFKRAGMETLINSDLTGAFCFFSGVAGGAVSALVGGTWALAVHKSYATEVSI----- 395
TW M + G++ LIN +L F + ++ L + +Y +
Sbjct: 431 TWYMLREKGIDALINDNLVNVALSFFTLFTCYITTLFAYLYLRYTDPNYNDNNNFTPALM 490
Query: 396 -YAFLIGYFMFRTATAWPLACVSAYYVAYAENPLHPRFDSTIPARIQELQR 445
+AF+I + T + + ++VA +P F + P R E+ R
Sbjct: 491 AFAFVIAMEICNVITETIRSGTATFFVALGNDP--EVFHLSYPERFDEIFR 539
>sp|Q12412|PNS1_YEAST Protein PNS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PNS1 PE=1 SV=1
Length = 539
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 135/333 (40%), Gaps = 32/333 (9%)
Query: 142 AVAIIAGVIQSIYTCWVNPRFEYAGKILSVSAAFPPARTAILVTLSIILSAVYSSFLVSG 201
+VA++ V+ ++ C + G + V++AF +A++V I S+
Sbjct: 210 SVAVLKVVVDAMKKCPQIFFVSFVGAL--VASAFGFLFSAVIVATYIKYDPNSSNGGCDV 267
Query: 202 IGGATAIGTTLDILFIAVILLSLAWSMHVIKNVLLVTISRVRYIHFAYGADMETEI---- 257
GG+ + + +L V+ + VI+NV+ IS V + + Y + + +
Sbjct: 268 SGGSCSHSKLIGVL--VVVFFCGYYISEVIRNVIHCVISGV-FGSWYYMSKSDQGMPRWP 324
Query: 258 ---AFRDTIKYLMGSVYIGSVFVPIFGSIWGSARTINAIAGERD------EFLFSCADCY 308
A + + Y GS+ GS+ V + + + I + LF D
Sbjct: 325 AFGALKRAMTYSFGSICFGSLLVALIDLLRQILQMIRHDVTSSGGGQIAIQILFMVFDWI 384
Query: 309 SAVASTLAAHGNRWGFVHVGVYNKGFIQASVDTWEMFKRAGMETLINSDLT----GAFCF 364
LA + N + + + +Y K +++A+ +TW M + GM+ LIN +L G F
Sbjct: 385 IGFLKWLAEYFNHYAYSFIALYGKPYLRAAKETWYMLREKGMDALINDNLINIALGLFSM 444
Query: 365 FSGVAGGAVSALV--GGTWALAVHKSYATEVSIYAFLIGYFMFRTATAWPLACVSAYYVA 422
F+ + L + + +Y + ++F+I + AT + + ++VA
Sbjct: 445 FASYMTALFTFLYLRFTSPQYNSNGAYNGALMAFSFVIALQICNIATEAIRSGTATFFVA 504
Query: 423 YAENPLHPRFDSTIPARIQELQRYQNEQIASPD 455
+P F + P R E+ R A PD
Sbjct: 505 LGNDP--EVFHHSYPHRFDEIFR------AYPD 529
>sp|Q5AB93|PNS1_CANAL Protein PNS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=PNS1 PE=3 SV=1
Length = 518
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 30/51 (58%)
Query: 306 DCYSAVASTLAAHGNRWGFVHVGVYNKGFIQASVDTWEMFKRAGMETLINS 356
D + L + N++ + +V +Y K +I+++ DT+++ + GM+ LIN
Sbjct: 362 DFFVGFIDWLVRYLNKYAYCYVALYGKSYIKSAKDTFDLIRFKGMDALIND 412
>sp|Q6GN42|CTL4_XENLA Choline transporter-like protein 4 OS=Xenopus laevis GN=slc44a4
PE=2 SV=1
Length = 707
Score = 35.4 bits (80), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 258 AFRDTIKYLMGSVYIGSVFVPIFGSIWGSARTIN-AIAGERD---EFLFSCADCYSAVAS 313
+F T++Y GS+ GS+ + I I ++ + G ++ FL C C
Sbjct: 486 SFMRTLRYHTGSLAFGSLILTIVQLIRIILEYVDHKLKGAQNPCTRFLLCCLKCCFWCLE 545
Query: 314 TLAAHGNRWGFVHVGVYNKGFIQASVDTWEMFKRAGMETLINSDLTGAFCFFSGVAGGAV 373
NR ++ + VY K F ++ + +++ R + ++ +T FF +
Sbjct: 546 KFIKFLNRNAYIMIAVYGKNFCVSAKNAFKLLMRNIVRVVVLDKVTDLLIFFGKL----- 600
Query: 374 SALVGGTWALA 384
+VGG LA
Sbjct: 601 -IVVGGVGVLA 610
>sp|Q5RJI2|CTL5_MOUSE Choline transporter-like protein 5 OS=Mus musculus GN=Slc44a5 PE=2
SV=1
Length = 710
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 9/126 (7%)
Query: 258 AFRDTIKYLMGSVYIGSVF---VPIFGSIWGS-ARTINAIAGERDEFLFSCADCYSAVAS 313
AF ++Y GS+ GS+ V +F I R + +FL C C
Sbjct: 498 AFGRAVRYHTGSLAFGSLILASVQMFKVIVEYLDRRLKKAQNSAAQFLHCCLQCCFWCLE 557
Query: 314 TLAAHGNRWGFVHVGVYNKGFIQASVDTWEMFKRAGMETLINSDLTGAFCFFSGVAGGA- 372
+ NR ++ + +Y K F +++ D + + R ++ + ++T +F + G
Sbjct: 558 KMVKFLNRNAYIMIALYGKNFCESTRDAFYLLMRNILKVTVTDEVT----YFVLLLGKVL 613
Query: 373 VSALVG 378
VS +VG
Sbjct: 614 VSGIVG 619
>sp|Q65K13|COXX_BACLD Protoheme IX farnesyltransferase OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=ctaB PE=3 SV=1
Length = 308
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 103 TQSKPSKAMRI----CFWLGPLMTCAFGILLLVINSAASLSTGAVAIIAGVIQSIYTCWV 158
T+++P+ +I W G L+T A G ++L++ + + G V + V +YT W
Sbjct: 95 TRTRPTVTGKIQPSQALWFGILLT-ALGFIMLLMTNLTAAGVGFVGVFTYVF--LYTMWS 151
Query: 159 NPRFEYAGKILSVSAAFPP 177
R+ I SVS A PP
Sbjct: 152 KRRYTVNTIIGSVSGAVPP 170
>sp|A7GNP0|COXX1_BACCN Protoheme IX farnesyltransferase 1 OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=ctaB1 PE=3 SV=1
Length = 305
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 103 TQSKPSK----AMRICFWLGPLMTCAFGILLLVINSAASLSTGAVAIIAGVIQSIYTCWV 158
T+++P+ + + WLG MT FG++ L + + + G + + V+ YT W
Sbjct: 88 TKNRPTVTGDISPKTALWLGIFMTI-FGLVFLALTTYLAAILGFIGLFLYVVP--YTMWS 144
Query: 159 NPRFEYAGKILSVSAAFPP 177
R Y +I SVS A PP
Sbjct: 145 KRRTIYNTEIGSVSGAMPP 163
>sp|P24009|COXX2_BACSU Protoheme IX farnesyltransferase 2 OS=Bacillus subtilis (strain
168) GN=ctaB2 PE=1 SV=2
Length = 305
Score = 32.7 bits (73), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 104 QSKPSKAMRICFWLGPLMTCAFGILLLVINSAASLSTGAVAIIAGVIQSIYTCWVNPRFE 163
+ +PS+A+ W G L+ A G+++L++ + + G + + V+ +YT W R+
Sbjct: 104 KIQPSQAL----WSGILL-VALGLIMLLMTTVMAAVIGFIGVFTYVV--LYTMWTKRRYT 156
Query: 164 YAGKILSVSAAFPP 177
+ SVS A PP
Sbjct: 157 INTVVGSVSGAVPP 170
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,704,818
Number of Sequences: 539616
Number of extensions: 6023815
Number of successful extensions: 19738
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 19688
Number of HSP's gapped (non-prelim): 46
length of query: 467
length of database: 191,569,459
effective HSP length: 121
effective length of query: 346
effective length of database: 126,275,923
effective search space: 43691469358
effective search space used: 43691469358
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)