Query 012276
Match_columns 467
No_of_seqs 185 out of 1370
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 00:55:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012276.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012276hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 7E-118 1E-122 887.1 39.6 421 19-467 22-450 (454)
2 PLN02209 serine carboxypeptida 100.0 1E-108 2E-113 831.5 44.2 427 12-467 10-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 2E-108 5E-113 829.6 42.8 431 4-467 3-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 5E-102 1E-106 794.9 28.9 403 31-464 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 1E-94 2.3E-99 739.2 37.2 386 36-467 42-461 (462)
6 PLN02213 sinapoylglucose-malat 100.0 9.7E-78 2.1E-82 589.3 31.3 319 119-467 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 1.6E-69 3.4E-74 532.8 22.0 369 55-464 86-490 (498)
8 KOG1283 Serine carboxypeptidas 100.0 3.5E-67 7.5E-72 481.8 14.5 388 41-462 3-411 (414)
9 TIGR01250 pro_imino_pep_2 prol 99.2 2.7E-09 5.8E-14 102.3 20.3 129 42-216 3-132 (288)
10 PRK00870 haloalkane dehalogena 99.2 6.7E-09 1.5E-13 101.7 23.0 141 23-214 7-149 (302)
11 PHA02857 monoglyceride lipase; 99.1 6.7E-09 1.5E-13 100.2 20.9 124 53-217 10-134 (276)
12 TIGR03611 RutD pyrimidine util 99.1 4.6E-09 9.9E-14 99.2 18.5 116 57-217 2-117 (257)
13 PLN02824 hydrolase, alpha/beta 99.1 5.6E-09 1.2E-13 101.8 19.6 122 45-215 12-137 (294)
14 TIGR03056 bchO_mg_che_rel puta 99.1 7.8E-09 1.7E-13 99.2 17.5 123 45-217 10-132 (278)
15 PRK03204 haloalkane dehalogena 99.0 3.9E-08 8.5E-13 95.6 21.6 59 380-462 227-285 (286)
16 PLN02385 hydrolase; alpha/beta 99.0 6.5E-08 1.4E-12 96.8 20.6 126 53-216 71-198 (349)
17 PRK10673 acyl-CoA esterase; Pr 98.9 2.5E-08 5.5E-13 94.7 15.5 104 65-213 11-114 (255)
18 PLN02298 hydrolase, alpha/beta 98.9 6.4E-08 1.4E-12 96.0 19.0 138 41-216 32-170 (330)
19 PRK03592 haloalkane dehalogena 98.9 6.2E-08 1.4E-12 94.4 18.6 120 45-217 11-130 (295)
20 TIGR03343 biphenyl_bphD 2-hydr 98.9 2.1E-07 4.5E-12 89.8 21.9 59 380-463 223-281 (282)
21 PLN03084 alpha/beta hydrolase 98.9 1.9E-07 4.2E-12 94.1 20.1 129 40-215 103-232 (383)
22 TIGR02427 protocat_pcaD 3-oxoa 98.9 1.9E-07 4.1E-12 87.3 18.9 59 380-463 193-251 (251)
23 PLN02679 hydrolase, alpha/beta 98.8 4E-07 8.7E-12 91.5 20.6 65 380-465 292-357 (360)
24 TIGR02240 PHA_depoly_arom poly 98.8 2E-07 4.3E-12 90.0 17.6 117 53-216 11-127 (276)
25 PLN02652 hydrolase; alpha/beta 98.8 3.9E-07 8.4E-12 92.4 19.2 127 53-216 120-246 (395)
26 PLN02578 hydrolase 98.7 9.8E-07 2.1E-11 88.5 18.3 112 53-214 75-186 (354)
27 PRK14875 acetoin dehydrogenase 98.7 6.6E-07 1.4E-11 90.0 16.6 114 53-214 118-231 (371)
28 PF12697 Abhydrolase_6: Alpha/ 98.7 4.1E-08 8.9E-13 90.1 7.1 104 73-218 1-104 (228)
29 PRK10749 lysophospholipase L2; 98.7 4E-06 8.7E-11 83.2 21.5 125 53-216 40-167 (330)
30 PRK10349 carboxylesterase BioH 98.7 2.7E-07 5.9E-12 87.9 12.6 59 380-463 196-254 (256)
31 TIGR01738 bioH putative pimelo 98.7 1.1E-06 2.4E-11 81.8 16.4 58 380-462 188-245 (245)
32 PLN02894 hydrolase, alpha/beta 98.6 5.1E-06 1.1E-10 84.7 20.8 109 68-215 103-211 (402)
33 KOG4178 Soluble epoxide hydrol 98.6 2.9E-06 6.2E-11 81.3 17.2 118 39-194 20-137 (322)
34 PRK06489 hypothetical protein; 98.6 7.1E-06 1.5E-10 82.5 20.8 59 380-464 292-356 (360)
35 KOG4409 Predicted hydrolase/ac 98.6 2E-06 4.3E-11 82.7 15.1 133 42-218 66-198 (365)
36 TIGR03695 menH_SHCHC 2-succiny 98.5 9.1E-07 2E-11 82.4 11.9 105 70-215 1-105 (251)
37 PLN03087 BODYGUARD 1 domain co 98.5 2E-05 4.3E-10 81.5 21.4 130 43-214 178-308 (481)
38 PRK08775 homoserine O-acetyltr 98.5 2.2E-06 4.7E-11 85.6 13.3 61 380-464 277-338 (343)
39 PRK07581 hypothetical protein; 98.4 7.3E-06 1.6E-10 81.6 16.4 59 380-463 275-334 (339)
40 TIGR01607 PST-A Plasmodium sub 98.4 4.4E-05 9.4E-10 75.9 21.1 151 53-217 7-187 (332)
41 PLN02980 2-oxoglutarate decarb 98.4 2.3E-05 4.9E-10 92.9 20.5 108 66-214 1367-1479(1655)
42 PLN02965 Probable pheophorbida 98.3 1.3E-05 2.8E-10 76.4 15.1 59 380-463 193-251 (255)
43 COG1506 DAP2 Dipeptidyl aminop 98.3 7.4E-06 1.6E-10 88.1 12.2 128 53-217 375-509 (620)
44 TIGR01249 pro_imino_pep_1 prol 98.2 7E-06 1.5E-10 80.6 10.0 127 43-217 6-132 (306)
45 COG2267 PldB Lysophospholipase 98.1 0.0001 2.2E-09 71.9 16.5 136 41-218 9-145 (298)
46 PRK00175 metX homoserine O-ace 98.1 8.7E-05 1.9E-09 75.2 16.2 64 380-464 309-373 (379)
47 PLN02511 hydrolase 98.0 0.00029 6.2E-09 71.6 18.2 116 44-190 74-193 (388)
48 PF10340 DUF2424: Protein of u 97.9 2E-05 4.3E-10 77.8 7.2 132 56-219 106-239 (374)
49 PRK11126 2-succinyl-6-hydroxy- 97.8 9.8E-05 2.1E-09 69.4 9.1 100 70-214 2-101 (242)
50 KOG1454 Predicted hydrolase/ac 97.7 0.0017 3.6E-08 64.2 16.4 60 380-464 264-323 (326)
51 PLN02872 triacylglycerol lipas 97.7 0.00058 1.3E-08 69.2 13.4 61 380-464 325-388 (395)
52 PRK05077 frsA fermentation/res 97.7 0.00026 5.6E-09 72.5 10.9 79 120-216 223-301 (414)
53 TIGR03101 hydr2_PEP hydrolase, 97.6 0.00031 6.7E-09 67.2 9.3 125 53-218 9-137 (266)
54 PLN02211 methyl indole-3-aceta 97.4 0.00079 1.7E-08 64.9 8.9 107 68-215 16-122 (273)
55 TIGR01840 esterase_phb esteras 97.4 0.00065 1.4E-08 62.8 8.0 118 67-215 10-130 (212)
56 TIGR02821 fghA_ester_D S-formy 97.3 0.0025 5.4E-08 61.5 12.1 52 155-217 123-175 (275)
57 KOG1455 Lysophospholipase [Lip 97.3 0.0023 5E-08 60.9 10.8 128 53-215 37-164 (313)
58 PLN02442 S-formylglutathione h 97.2 0.0017 3.7E-08 63.0 9.3 57 149-218 125-181 (283)
59 COG3509 LpqC Poly(3-hydroxybut 97.2 0.0049 1.1E-07 58.5 11.7 146 53-236 44-202 (312)
60 PRK05855 short chain dehydroge 96.9 0.0052 1.1E-07 65.6 10.5 100 53-187 12-111 (582)
61 COG0596 MhpC Predicted hydrola 96.9 0.0082 1.8E-07 55.4 10.3 105 70-217 21-125 (282)
62 PRK10566 esterase; Provisional 96.8 0.0082 1.8E-07 56.6 9.6 62 380-464 186-247 (249)
63 PF00561 Abhydrolase_1: alpha/ 96.7 0.0024 5.1E-08 58.9 5.4 56 379-459 174-229 (230)
64 PRK10985 putative hydrolase; P 96.7 0.0091 2E-07 59.1 9.4 46 380-450 255-300 (324)
65 TIGR03100 hydr1_PEP hydrolase, 96.6 0.0098 2.1E-07 57.3 9.0 78 120-216 58-135 (274)
66 cd00707 Pancreat_lipase_like P 96.5 0.0019 4.2E-08 62.3 3.3 113 68-215 34-147 (275)
67 TIGR00976 /NonD putative hydro 96.2 0.011 2.3E-07 63.1 7.1 129 53-218 6-135 (550)
68 PRK10115 protease 2; Provision 96.0 0.024 5.2E-07 61.9 9.0 127 53-218 426-562 (686)
69 KOG1515 Arylacetamide deacetyl 96.0 0.056 1.2E-06 53.3 10.5 136 53-218 71-210 (336)
70 TIGR03230 lipo_lipase lipoprot 95.9 0.02 4.4E-07 58.5 7.2 80 120-214 74-153 (442)
71 PF06500 DUF1100: Alpha/beta h 95.8 0.0055 1.2E-07 61.5 2.4 81 120-218 219-299 (411)
72 PF00326 Peptidase_S9: Prolyl 95.5 0.007 1.5E-07 55.8 1.8 89 120-219 15-103 (213)
73 PLN00021 chlorophyllase 95.4 0.13 2.9E-06 50.4 10.7 116 67-217 49-168 (313)
74 KOG2564 Predicted acetyltransf 95.4 0.098 2.1E-06 49.4 8.9 108 67-212 71-179 (343)
75 PF00975 Thioesterase: Thioest 95.3 0.053 1.1E-06 50.3 7.3 102 72-215 2-104 (229)
76 PRK10162 acetyl esterase; Prov 95.3 0.056 1.2E-06 53.3 7.5 60 153-217 138-197 (318)
77 KOG4391 Predicted alpha/beta h 95.1 0.047 1E-06 49.5 5.8 123 53-217 64-186 (300)
78 PF12695 Abhydrolase_5: Alpha/ 95.1 0.035 7.6E-07 47.2 5.0 94 72-214 1-94 (145)
79 PF10503 Esterase_phd: Esteras 94.9 0.13 2.8E-06 47.8 8.2 40 166-215 93-132 (220)
80 TIGR01392 homoserO_Ac_trn homo 94.8 0.21 4.5E-06 49.9 10.1 63 380-463 288-351 (351)
81 PF10230 DUF2305: Uncharacteri 94.6 0.22 4.7E-06 47.8 9.3 118 70-217 2-124 (266)
82 PRK06765 homoserine O-acetyltr 94.5 0.087 1.9E-06 53.4 6.7 65 380-465 323-388 (389)
83 KOG2100 Dipeptidyl aminopeptid 94.5 0.097 2.1E-06 57.6 7.4 144 42-218 499-647 (755)
84 TIGR01392 homoserO_Ac_trn homo 94.5 0.053 1.1E-06 54.2 5.1 127 53-215 15-162 (351)
85 PF08386 Abhydrolase_4: TAP-li 94.2 0.19 4E-06 40.7 6.8 60 380-464 34-93 (103)
86 PRK11460 putative hydrolase; P 94.2 0.25 5.5E-06 46.2 8.7 53 152-215 86-138 (232)
87 PRK11126 2-succinyl-6-hydroxy- 93.8 0.087 1.9E-06 49.1 4.7 54 380-464 188-241 (242)
88 PRK11071 esterase YqiA; Provis 93.8 0.28 6.1E-06 44.4 7.9 54 380-463 136-189 (190)
89 cd00312 Esterase_lipase Estera 92.9 0.26 5.5E-06 51.8 7.1 55 153-216 160-214 (493)
90 KOG1838 Alpha/beta hydrolase [ 92.9 1.3 2.8E-05 44.5 11.4 108 67-214 122-235 (409)
91 PLN02454 triacylglycerol lipas 91.4 0.52 1.1E-05 47.6 6.7 69 146-217 205-273 (414)
92 PF02230 Abhydrolase_2: Phosph 90.6 0.48 1E-05 43.7 5.4 57 148-216 85-141 (216)
93 PF07519 Tannase: Tannase and 90.1 24 0.00052 36.9 17.9 80 372-464 345-426 (474)
94 PRK10566 esterase; Provisional 90.0 0.71 1.5E-05 43.3 6.2 111 56-190 13-127 (249)
95 PF00561 Abhydrolase_1: alpha/ 89.3 0.44 9.5E-06 43.5 4.0 77 121-214 2-78 (230)
96 PRK11460 putative hydrolase; P 89.2 0.5 1.1E-05 44.2 4.4 62 380-462 148-209 (232)
97 KOG2382 Predicted alpha/beta h 88.8 0.78 1.7E-05 44.5 5.3 60 380-464 253-312 (315)
98 PRK05855 short chain dehydroge 88.7 0.47 1E-05 50.6 4.3 59 380-464 233-291 (582)
99 PF00326 Peptidase_S9: Prolyl 88.6 0.65 1.4E-05 42.5 4.6 64 379-463 143-207 (213)
100 PF06057 VirJ: Bacterial virul 87.6 0.92 2E-05 40.8 4.7 65 144-217 45-109 (192)
101 PF06342 DUF1057: Alpha/beta h 87.5 5.7 0.00012 38.0 10.0 102 66-214 31-136 (297)
102 COG0657 Aes Esterase/lipase [L 87.1 3.5 7.6E-05 40.3 9.1 45 169-219 151-195 (312)
103 PF01764 Lipase_3: Lipase (cla 86.9 1.2 2.6E-05 37.7 5.0 62 148-215 45-106 (140)
104 PRK10439 enterobactin/ferric e 86.1 3.7 7.9E-05 42.0 8.8 36 170-215 288-323 (411)
105 PF07859 Abhydrolase_3: alpha/ 86.0 1.1 2.4E-05 40.7 4.6 63 148-217 47-112 (211)
106 PF02129 Peptidase_S15: X-Pro 85.9 0.53 1.1E-05 45.2 2.5 83 120-219 58-140 (272)
107 TIGR03502 lipase_Pla1_cef extr 85.9 2.9 6.2E-05 46.1 8.2 99 69-190 448-575 (792)
108 PRK05371 x-prolyl-dipeptidyl a 85.3 1.1 2.3E-05 49.8 4.7 90 117-218 277-376 (767)
109 PLN02571 triacylglycerol lipas 85.3 2.5 5.5E-05 42.8 6.9 69 148-217 205-277 (413)
110 TIGR03100 hydr1_PEP hydrolase, 84.9 1.8 3.9E-05 41.5 5.6 70 376-463 203-273 (274)
111 cd00741 Lipase Lipase. Lipase 84.5 2.5 5.4E-05 36.5 5.9 60 148-215 9-68 (153)
112 PRK10252 entF enterobactin syn 84.4 4.7 0.0001 47.7 9.9 103 70-214 1068-1170(1296)
113 PF05990 DUF900: Alpha/beta hy 84.2 1.8 3.9E-05 40.5 5.2 67 148-218 74-140 (233)
114 TIGR01836 PHA_synth_III_C poly 83.6 2.1 4.6E-05 42.6 5.7 61 380-464 286-349 (350)
115 PLN02211 methyl indole-3-aceta 83.6 2.8 6E-05 40.2 6.3 59 380-464 211-269 (273)
116 COG2272 PnbA Carboxylesterase 83.4 5.5 0.00012 41.0 8.4 112 55-187 79-197 (491)
117 cd00519 Lipase_3 Lipase (class 82.9 2.7 5.8E-05 39.1 5.8 60 149-216 110-169 (229)
118 PF11144 DUF2920: Protein of u 82.9 2.5 5.4E-05 42.5 5.7 61 148-218 161-222 (403)
119 PF03583 LIP: Secretory lipase 82.9 1.9 4.1E-05 41.9 4.8 65 380-466 219-286 (290)
120 TIGR01249 pro_imino_pep_1 prol 82.8 3.4 7.4E-05 40.2 6.7 43 380-447 248-290 (306)
121 COG0596 MhpC Predicted hydrola 82.2 4 8.7E-05 37.0 6.7 62 378-463 219-280 (282)
122 PF11288 DUF3089: Protein of u 82.0 2.3 5E-05 38.9 4.7 45 148-194 75-119 (207)
123 PF02230 Abhydrolase_2: Phosph 81.7 1.2 2.6E-05 41.1 2.8 59 380-463 155-213 (216)
124 COG4099 Predicted peptidase [G 81.4 25 0.00055 34.0 11.3 132 51-216 169-305 (387)
125 PF05728 UPF0227: Uncharacteri 81.1 2.3 5.1E-05 38.3 4.4 39 169-220 58-96 (187)
126 PF05677 DUF818: Chlamydia CHL 81.0 3.9 8.6E-05 40.1 6.1 61 118-186 170-231 (365)
127 PF05577 Peptidase_S28: Serine 81.0 2.4 5.2E-05 43.7 5.1 69 144-222 87-155 (434)
128 PF12146 Hydrolase_4: Putative 80.9 9.7 0.00021 28.9 7.2 78 54-158 2-79 (79)
129 PF12695 Abhydrolase_5: Alpha/ 80.5 3.1 6.8E-05 34.9 4.9 44 378-445 102-145 (145)
130 COG0400 Predicted esterase [Ge 80.3 8.1 0.00017 35.5 7.7 80 128-218 58-137 (207)
131 TIGR01836 PHA_synth_III_C poly 80.1 11 0.00024 37.5 9.4 79 120-218 95-174 (350)
132 PLN02733 phosphatidylcholine-s 79.5 3.8 8.3E-05 42.2 5.9 41 147-190 142-182 (440)
133 COG0400 Predicted esterase [Ge 79.2 2.3 5E-05 39.0 3.8 60 379-464 145-204 (207)
134 PRK13604 luxD acyl transferase 78.7 25 0.00054 34.4 10.9 45 380-447 202-246 (307)
135 PLN02753 triacylglycerol lipas 78.4 5.7 0.00012 41.4 6.6 73 145-217 285-361 (531)
136 KOG2183 Prolylcarboxypeptidase 77.8 3.7 8E-05 41.2 4.9 65 120-187 112-184 (492)
137 PRK13604 luxD acyl transferase 77.7 4.8 0.0001 39.3 5.6 124 53-217 19-143 (307)
138 KOG1552 Predicted alpha/beta h 77.5 6.7 0.00015 36.9 6.3 78 119-217 88-165 (258)
139 KOG3101 Esterase D [General fu 77.3 13 0.00029 33.9 7.8 157 41-219 9-180 (283)
140 KOG4627 Kynurenine formamidase 76.4 2 4.4E-05 38.9 2.4 73 130-217 102-174 (270)
141 PLN02719 triacylglycerol lipas 76.2 7 0.00015 40.6 6.5 71 147-217 273-347 (518)
142 smart00824 PKS_TE Thioesterase 75.4 10 0.00022 33.8 7.0 75 120-213 26-100 (212)
143 PLN02324 triacylglycerol lipas 74.8 8.7 0.00019 39.0 6.7 70 147-217 193-267 (415)
144 PF05448 AXE1: Acetyl xylan es 74.4 16 0.00034 36.0 8.4 139 53-216 66-210 (320)
145 PRK06765 homoserine O-acetyltr 74.2 14 0.0003 37.6 8.2 54 144-214 141-195 (389)
146 PF08237 PE-PPE: PE-PPE domain 74.2 11 0.00024 35.1 6.9 87 120-214 3-89 (225)
147 KOG3975 Uncharacterized conser 74.1 15 0.00033 34.5 7.5 99 68-188 27-128 (301)
148 PF00756 Esterase: Putative es 73.3 8.7 0.00019 35.9 6.2 45 163-218 109-153 (251)
149 COG0627 Predicted esterase [Ge 72.7 6.7 0.00014 38.5 5.3 133 69-218 52-190 (316)
150 KOG2281 Dipeptidyl aminopeptid 72.6 8.1 0.00018 41.0 6.0 113 68-219 640-766 (867)
151 TIGR01838 PHA_synth_I poly(R)- 72.4 5 0.00011 42.4 4.6 85 120-218 221-305 (532)
152 PRK10985 putative hydrolase; P 72.4 8.2 0.00018 37.9 6.0 133 46-217 36-170 (324)
153 PRK04940 hypothetical protein; 70.6 12 0.00027 33.3 6.0 59 145-219 38-96 (180)
154 PRK05077 frsA fermentation/res 69.6 8.6 0.00019 39.4 5.6 57 380-464 355-411 (414)
155 PLN02761 lipase class 3 family 67.3 15 0.00033 38.3 6.6 70 148-217 269-344 (527)
156 PF00151 Lipase: Lipase; Inte 64.7 1.9 4.2E-05 42.7 -0.3 70 119-193 104-173 (331)
157 PF05057 DUF676: Putative seri 64.6 11 0.00023 34.9 4.6 50 145-195 54-103 (217)
158 COG3208 GrsT Predicted thioest 64.1 12 0.00027 34.9 4.8 59 380-463 176-234 (244)
159 KOG1552 Predicted alpha/beta h 64.0 11 0.00024 35.4 4.6 59 380-463 192-250 (258)
160 COG3319 Thioesterase domains o 63.7 21 0.00046 33.9 6.5 103 71-216 1-104 (257)
161 PRK14567 triosephosphate isome 61.2 22 0.00048 33.7 6.1 60 148-218 179-238 (253)
162 PLN02408 phospholipase A1 60.9 12 0.00027 37.3 4.5 46 148-194 179-224 (365)
163 PF11187 DUF2974: Protein of u 60.7 17 0.00036 33.8 5.2 51 153-213 71-121 (224)
164 COG2945 Predicted hydrolase of 59.7 12 0.00025 33.8 3.7 58 129-193 69-126 (210)
165 PLN02310 triacylglycerol lipas 58.7 21 0.00045 36.2 5.7 64 148-216 186-250 (405)
166 KOG2551 Phospholipase/carboxyh 58.5 28 0.0006 32.2 5.9 58 380-463 163-222 (230)
167 KOG1553 Predicted alpha/beta h 58.1 20 0.00044 35.2 5.2 59 141-214 286-344 (517)
168 PRK14566 triosephosphate isome 57.9 26 0.00056 33.4 5.9 60 148-218 189-248 (260)
169 PLN02802 triacylglycerol lipas 57.3 23 0.0005 36.9 5.8 64 148-216 309-372 (509)
170 PLN00413 triacylglycerol lipas 56.9 14 0.00031 38.1 4.2 39 152-193 269-307 (479)
171 PF10081 Abhydrolase_9: Alpha/ 55.8 15 0.00034 35.1 4.0 38 146-183 85-122 (289)
172 PF08194 DIM: DIM protein; In 52.7 18 0.00039 22.9 2.6 20 1-20 1-20 (36)
173 PLN02162 triacylglycerol lipas 52.0 18 0.0004 37.2 4.1 40 151-193 262-301 (475)
174 PLN02934 triacylglycerol lipas 51.9 21 0.00045 37.2 4.5 41 151-194 305-345 (515)
175 PF09292 Neil1-DNA_bind: Endon 50.8 9.5 0.00021 24.2 1.2 12 70-81 24-35 (39)
176 KOG2182 Hydrolytic enzymes of 50.1 54 0.0012 34.0 7.0 44 145-188 147-190 (514)
177 PRK11071 esterase YqiA; Provis 49.6 27 0.00059 31.3 4.6 79 71-191 2-82 (190)
178 PF08840 BAAT_C: BAAT / Acyl-C 49.1 11 0.00024 34.7 1.9 46 158-214 10-55 (213)
179 PLN02847 triacylglycerol lipas 48.5 34 0.00074 36.4 5.5 62 149-218 233-295 (633)
180 KOG2984 Predicted hydrolase [G 47.8 26 0.00057 31.9 4.0 102 53-190 30-134 (277)
181 PF00681 Plectin: Plectin repe 47.7 18 0.00038 24.2 2.3 33 212-244 11-43 (45)
182 PLN02429 triosephosphate isome 47.5 45 0.00098 32.7 5.9 60 148-218 239-299 (315)
183 PF03959 FSH1: Serine hydrolas 47.1 15 0.00033 33.6 2.6 49 380-453 161-209 (212)
184 COG1073 Hydrolases of the alph 47.1 41 0.00089 31.6 5.7 61 381-464 233-296 (299)
185 KOG4569 Predicted lipase [Lipi 46.8 37 0.00081 33.7 5.4 58 152-215 156-213 (336)
186 KOG1516 Carboxylesterase and r 46.7 1.1E+02 0.0024 32.4 9.4 34 154-188 180-213 (545)
187 PLN03037 lipase class 3 family 46.1 41 0.00089 35.2 5.6 64 149-216 296-360 (525)
188 COG4757 Predicted alpha/beta h 45.4 42 0.00091 31.3 4.9 65 120-188 58-123 (281)
189 PF06821 Ser_hydrolase: Serine 44.9 25 0.00053 31.2 3.4 52 154-215 40-91 (171)
190 PF13956 Ibs_toxin: Toxin Ibs, 44.9 15 0.00032 19.3 1.1 15 3-17 1-15 (19)
191 TIGR01838 PHA_synth_I poly(R)- 44.8 1E+02 0.0022 32.8 8.4 49 380-453 415-463 (532)
192 PLN02442 S-formylglutathione h 44.7 31 0.00068 33.1 4.4 48 379-447 216-264 (283)
193 KOG3079 Uridylate kinase/adeny 43.4 13 0.00028 33.3 1.3 16 68-83 5-20 (195)
194 PF12740 Chlorophyllase2: Chlo 43.2 42 0.00092 31.9 4.9 64 145-215 62-131 (259)
195 PRK07868 acyl-CoA synthetase; 43.0 79 0.0017 36.5 8.0 39 169-216 140-178 (994)
196 PF03403 PAF-AH_p_II: Platelet 42.5 14 0.00031 37.3 1.7 37 171-218 229-265 (379)
197 PF02450 LCAT: Lecithin:choles 42.2 21 0.00045 36.3 2.8 41 152-192 101-141 (389)
198 PF06259 Abhydrolase_8: Alpha/ 42.1 42 0.00091 29.9 4.4 65 118-190 62-129 (177)
199 PRK07868 acyl-CoA synthetase; 41.5 39 0.00085 38.9 5.2 60 380-464 297-360 (994)
200 PF15613 WHIM2: WSTF, HB1, Itc 40.3 56 0.0012 21.1 3.6 28 54-81 11-38 (38)
201 PF08840 BAAT_C: BAAT / Acyl-C 39.1 38 0.00083 31.1 3.9 48 380-446 115-163 (213)
202 PF07819 PGAP1: PGAP1-like pro 36.3 54 0.0012 30.4 4.4 41 148-188 61-103 (225)
203 COG2819 Predicted hydrolase of 36.1 3.1E+02 0.0068 26.1 9.4 55 150-215 113-172 (264)
204 cd00311 TIM Triosephosphate is 36.1 1E+02 0.0022 29.0 6.3 59 148-218 176-235 (242)
205 PF06821 Ser_hydrolase: Serine 35.7 57 0.0012 28.8 4.3 43 381-449 115-157 (171)
206 PF08048 RepA1_leader: Tap Rep 35.4 51 0.0011 18.7 2.4 20 3-22 1-22 (25)
207 COG0429 Predicted hydrolase of 34.7 72 0.0016 31.4 5.0 120 53-214 60-185 (345)
208 PF04414 tRNA_deacylase: D-ami 34.7 86 0.0019 28.9 5.3 48 144-194 104-152 (213)
209 COG3571 Predicted hydrolase of 34.4 67 0.0015 28.2 4.2 28 166-193 85-112 (213)
210 PF06309 Torsin: Torsin; Inte 34.0 33 0.00071 28.8 2.3 17 67-83 49-65 (127)
211 KOG2382 Predicted alpha/beta h 33.9 66 0.0014 31.5 4.6 90 63-181 45-134 (315)
212 COG3896 Chloramphenicol 3-O-ph 33.4 39 0.00084 29.6 2.6 27 70-96 22-52 (205)
213 PLN02561 triosephosphate isome 33.2 96 0.0021 29.4 5.6 59 148-217 180-239 (253)
214 COG3545 Predicted esterase of 33.2 49 0.0011 29.4 3.3 36 169-214 58-93 (181)
215 KOG3043 Predicted hydrolase re 33.0 83 0.0018 29.2 4.8 72 380-463 164-238 (242)
216 PF03283 PAE: Pectinacetyleste 32.0 2.5E+02 0.0054 28.2 8.6 153 53-216 34-198 (361)
217 COG4425 Predicted membrane pro 31.9 64 0.0014 33.0 4.3 37 146-182 373-409 (588)
218 KOG3724 Negative regulator of 31.4 65 0.0014 35.4 4.4 96 73-188 92-200 (973)
219 PF03583 LIP: Secretory lipase 31.2 1E+02 0.0022 29.8 5.6 45 169-218 70-116 (290)
220 PRK14745 RepA leader peptide T 31.2 61 0.0013 18.4 2.3 21 3-23 1-23 (26)
221 PTZ00333 triosephosphate isome 31.2 1.1E+02 0.0023 29.1 5.5 59 148-217 183-242 (255)
222 PRK06762 hypothetical protein; 31.2 27 0.00059 30.3 1.5 21 71-91 2-24 (166)
223 PF01083 Cutinase: Cutinase; 30.4 87 0.0019 27.9 4.6 84 121-217 41-125 (179)
224 PF08538 DUF1749: Protein of u 30.3 84 0.0018 30.6 4.7 70 145-219 82-152 (303)
225 PRK14565 triosephosphate isome 30.3 1.1E+02 0.0023 28.8 5.3 52 148-218 174-225 (237)
226 PF03096 Ndr: Ndr family; Int 30.2 22 0.00048 34.2 0.7 62 380-466 219-280 (283)
227 PRK03995 hypothetical protein; 30.2 92 0.002 29.8 4.9 48 144-194 156-203 (267)
228 PF10929 DUF2811: Protein of u 30.0 47 0.001 23.5 2.1 22 148-169 5-26 (57)
229 PF07389 DUF1500: Protein of u 29.9 39 0.00084 26.0 1.8 26 152-179 8-33 (100)
230 COG0218 Predicted GTPase [Gene 29.7 1E+02 0.0022 28.0 4.9 63 67-136 20-85 (200)
231 COG3208 GrsT Predicted thioest 29.7 1.1E+02 0.0023 28.8 5.1 65 120-194 34-98 (244)
232 PRK00042 tpiA triosephosphate 29.5 1.5E+02 0.0033 28.0 6.3 59 148-218 180-239 (250)
233 PF15253 STIL_N: SCL-interrupt 28.6 67 0.0015 32.5 3.8 36 40-78 199-235 (410)
234 TIGR03475 tap_IncFII_lead RepA 28.2 77 0.0017 18.2 2.3 21 3-23 1-23 (26)
235 PF01583 APS_kinase: Adenylyls 27.5 34 0.00073 29.9 1.4 27 70-96 1-33 (156)
236 COG2945 Predicted hydrolase of 26.9 63 0.0014 29.3 2.9 56 380-462 149-204 (210)
237 COG4782 Uncharacterized protei 26.0 1.3E+02 0.0027 30.2 5.1 66 148-218 172-237 (377)
238 COG0221 Ppa Inorganic pyrophos 25.5 1.6E+02 0.0036 26.0 5.3 29 109-137 24-52 (171)
239 cd00412 pyrophosphatase Inorga 25.4 2.4E+02 0.0052 24.5 6.2 44 147-194 109-152 (155)
240 PLN02517 phosphatidylcholine-s 25.2 39 0.00083 36.1 1.5 41 151-191 193-234 (642)
241 PF10503 Esterase_phd: Esteras 24.8 68 0.0015 29.7 2.9 26 380-405 169-194 (220)
242 PF07849 DUF1641: Protein of u 24.8 28 0.00061 22.9 0.3 14 333-346 19-32 (42)
243 PF01555 N6_N4_Mtase: DNA meth 24.5 77 0.0017 28.7 3.4 40 121-163 2-41 (231)
244 PF12532 DUF3732: Protein of u 24.2 1.1E+02 0.0023 27.7 4.1 45 120-164 101-152 (193)
245 KOG2369 Lecithin:cholesterol a 24.1 55 0.0012 33.7 2.3 46 148-193 159-205 (473)
246 COG1647 Esterase/lipase [Gener 23.5 4.1E+02 0.0089 24.8 7.5 38 170-219 85-122 (243)
247 KOG3967 Uncharacterized conser 22.7 2.4E+02 0.0052 26.1 5.8 59 142-214 168-226 (297)
248 PRK05371 x-prolyl-dipeptidyl a 22.7 1.7E+02 0.0036 32.8 5.9 28 380-407 455-482 (767)
249 KOG3877 NADH:ubiquinone oxidor 22.6 89 0.0019 30.0 3.2 50 117-183 68-117 (393)
250 COG1770 PtrB Protease II [Amin 21.8 2.4E+02 0.0053 30.5 6.5 59 150-220 508-567 (682)
251 COG3946 VirJ Type IV secretory 21.6 1.4E+02 0.0031 30.3 4.5 48 144-194 303-350 (456)
252 PF10609 ParA: ParA/MinD ATPas 21.2 49 0.0011 25.3 1.0 12 121-132 2-13 (81)
253 PRK13962 bifunctional phosphog 20.8 1.8E+02 0.0039 31.7 5.5 60 148-218 575-635 (645)
254 PF01738 DLH: Dienelactone hyd 20.8 2.6E+02 0.0056 25.2 6.0 45 380-445 145-189 (218)
255 TIGR01840 esterase_phb esteras 20.8 69 0.0015 29.0 2.2 27 381-407 169-195 (212)
256 PF07224 Chlorophyllase: Chlor 20.7 1.1E+02 0.0025 29.1 3.5 62 148-217 94-159 (307)
257 PF04446 Thg1: tRNAHis guanyly 20.0 92 0.002 26.4 2.6 51 121-178 22-73 (135)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-118 Score=887.08 Aligned_cols=421 Identities=49% Similarity=0.878 Sum_probs=375.6
Q ss_pred ccCCCCCccccCCCCCCCCCCceeeeeEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEe
Q 012276 19 QPAASHSTVKFLPGFQGPLPFELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFN 98 (467)
Q Consensus 19 ~~~~~~~~v~~lp~~~~~~~~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~ 98 (467)
....++++|+.|||+..++++++|||||+|+++.+++||||||||+++|+++||||||||||||||+.|+|.|+|||+++
T Consensus 22 ~~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~ 101 (454)
T KOG1282|consen 22 HHVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVK 101 (454)
T ss_pred cccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEc
Confidence 46678899999999987899999999999998888999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecc
Q 012276 99 TVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDS 178 (467)
Q Consensus 99 ~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GES 178 (467)
.+ | .+|..||||||+.||||||||||||||||+++..++.++|+.+|+|++.||++||++||||++|||||+|||
T Consensus 102 ~~---G--~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GES 176 (454)
T KOG1282|consen 102 YN---G--KTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGES 176 (454)
T ss_pred CC---C--CcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccc
Confidence 53 3 479999999999999999999999999999888777789999999999999999999999999999999999
Q ss_pred cCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCchhhccchhhhhhhcCCCCHHHHHHHHHHhCC---cccccCC
Q 012276 179 YSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGG---EYVNVDP 255 (467)
Q Consensus 179 YgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~~~~~~~~~~a~~~gli~~~~~~~~~~~c~~---~~~~~~~ 255 (467)
|||||||.||++|+++|+....+.|||||++||||++|+..|.+++.+|++.||+|+++.++.+++.|.. +|.....
T Consensus 177 YAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~ 256 (454)
T KOG1282|consen 177 YAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDP 256 (454)
T ss_pred ccceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCC
Confidence 9999999999999999976566789999999999999999999999999999999999999999999987 4544444
Q ss_pred CChhHHHHHHHHH-HHhcCCcccCCCccccccCCCCccccccCCccccccccccccCCCCCCCCCCCcccccccchhccc
Q 012276 256 NNKDCLNDIQTFS-KLTSGVEKSHILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCRSYGYLLARYWD 334 (467)
Q Consensus 256 ~~~~C~~~~~~~~-~~~~~~~~~~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~yl 334 (467)
....|.++++.+. .+..+++.|+++.+.|...++.. .. ...+...++|.. ... .+||
T Consensus 257 ~~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~------~~-------------~~~~~~~~~c~~--~~~-~~yl 314 (454)
T KOG1282|consen 257 SNTKCNKAVEEFDSKTTGDIDNYYILTPDCYPTSYEL------KK-------------PTDCYGYDPCLS--DYA-EKYL 314 (454)
T ss_pred chhHHHHHHHHHHHHHhccCchhhhcchhhccccccc------cc-------------cccccccCCchh--hhH-HHhc
Confidence 5678999999987 77789999999988896411000 00 001233467843 222 5699
Q ss_pred CcHHHHHhcCCcCCCccccccccCCCC--CCccCCchHHHHHHhhhcC-CeEEEEeCCCccccCchhHHHHHHhcCCCCC
Q 012276 335 NDHNVRKALHIRQGSKGEWIRCNYDLP--YTHEIGNSFSYHVSLSTKG-YRSLIYSGDHDMLIPFLGTEAWIKSLNYSIV 411 (467)
Q Consensus 335 N~~~Vk~aL~v~~~~~~~w~~c~~~~~--~~~d~~~~~~~~~~lL~~~-irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~ 411 (467)
|+++||+||||+.....+|+.|++.+. |..+..++++.+..++.++ +|||||+||.|++||+.||++||++|+++..
T Consensus 315 N~~~VrkALh~~~~~~~~W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~ 394 (454)
T KOG1282|consen 315 NRPEVRKALHANKTSIGKWERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSIT 394 (454)
T ss_pred CCHHHHHHhCCCCCCCCcccccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccc
Confidence 999999999998863227999999874 6778889999999988865 9999999999999999999999999999999
Q ss_pred CCccceeeC-CeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHHHHHcCCCC
Q 012276 412 DDWRPWILH-SQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWINHDPL 467 (467)
Q Consensus 412 ~~~~~w~~~-~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~~fl~~~~~ 467 (467)
.+|+||+++ +|++||+++| ++|||+||+|||||||.|||++|++||++||.|+++
T Consensus 395 ~~~~pW~~~~~qvaG~~~~Y-~~ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l 450 (454)
T KOG1282|consen 395 DEWRPWYHKGGQVAGYTKTY-GGLTFATVRGAGHMVPYDKPESALIMFQRFLNGQPL 450 (454)
T ss_pred cCccCCccCCCceeeeEEEe-cCEEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCC
Confidence 999999995 8999999999 569999999999999999999999999999999885
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.1e-108 Score=831.53 Aligned_cols=427 Identities=56% Similarity=1.057 Sum_probs=365.0
Q ss_pred HHHHHhhccCCCCCccccCCCCCCCCCCceeeeeEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHh
Q 012276 12 LLLQLCMQPAASHSTVKFLPGFQGPLPFELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYE 91 (467)
Q Consensus 12 ~~~~~~~~~~~~~~~v~~lp~~~~~~~~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E 91 (467)
++++.+..++++.++|++|||+.++++++++|||++|+++.+++||||||||+++|+++||||||||||||||+.|+|.|
T Consensus 10 ~~~~~~~~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e 89 (437)
T PLN02209 10 LILLVSSHHVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFE 89 (437)
T ss_pred HHHHHhcccCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHh
Confidence 34556666777889999999998889999999999998876789999999999999999999999999999999999999
Q ss_pred hcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCC
Q 012276 92 IGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNP 171 (467)
Q Consensus 92 ~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~ 171 (467)
+|||+++.++.++...++++||||||+.|||||||||+||||||+.+..... +++++|+++++||+.||++||+|+++|
T Consensus 90 ~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~ 168 (437)
T PLN02209 90 NGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT-SDTSEVKKIHEFLQKWLIKHPQFLSNP 168 (437)
T ss_pred cCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc-CCHHHHHHHHHHHHHHHHhCccccCCC
Confidence 9999998754333334799999999999999999999999999987654443 455677999999999999999999999
Q ss_pred eEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCchhhccchhhhhhhcCCCCHHHHHHHHHHhCCccc
Q 012276 172 FYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYV 251 (467)
Q Consensus 172 ~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~~~~~~~~~~a~~~gli~~~~~~~~~~~c~~~~~ 251 (467)
|||+||||||||||.||++|+++|+....+.||||||+||||++||..|..++.+|+|.+|+|++++++.+++.|..++.
T Consensus 169 ~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~ 248 (437)
T PLN02209 169 FYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYF 248 (437)
T ss_pred EEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccc
Confidence 99999999999999999999998865556789999999999999999999999999999999999999999999976543
Q ss_pred ccCCCChhHHHHHHHHHHHhcCCcccCCCccccccCCCCccccccCCccccccccccccCCCCCCCCCCCcccccccchh
Q 012276 252 NVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCRSYGYLLAR 331 (467)
Q Consensus 252 ~~~~~~~~C~~~~~~~~~~~~~~~~~~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 331 (467)
...+....|.+++++...|.+.++.|+++...|... ..+. ...+|..+......
T Consensus 249 ~~~~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~-----------~~~~---------------~~~~c~~~~~~~~~ 302 (437)
T PLN02209 249 SVDPSNKKCLKLVEEYHKCTDNINSHHTLIANCDDS-----------NTQH---------------ISPDCYYYPYHLVE 302 (437)
T ss_pred cCCCChHHHHHHHHHHHHHhhcCCcccccccccccc-----------cccc---------------CCCCcccccHHHHH
Confidence 233445689999998888888888876554446320 0000 01235322222335
Q ss_pred cccCcHHHHHhcCCcCCCccccccccCCCCCCccCCchHHHHHHhhhcCCeEEEEeCCCccccCchhHHHHHHhcCCCCC
Q 012276 332 YWDNDHNVRKALHIRQGSKGEWIRCNYDLPYTHEIGNSFSYHVSLSTKGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIV 411 (467)
Q Consensus 332 ~ylN~~~Vk~aL~v~~~~~~~w~~c~~~~~~~~d~~~~~~~~~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~ 411 (467)
.|||+++||+||||+......|..|+..+.+..|..++++.+.++|.+++|||||+||.|++||+.|+++|+++|+|+++
T Consensus 303 ~ylN~~~V~~aL~v~~~~~~~w~~~~~~~~~~~d~~~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~ 382 (437)
T PLN02209 303 CWANNESVREALHVDKGSIGEWIRDHRGIPYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSII 382 (437)
T ss_pred HHhCCHHHHHHhCCCCCCCCCCccccchhhcccchhhhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccC
Confidence 69999999999999854335799999776666777777777777777899999999999999999999999999999999
Q ss_pred CCccceeeCCeeeeEEEEEecc-eEEEEEcCCcccCCCCCcHHHHHHHHHHHcCCCC
Q 012276 412 DDWRPWILHSQVAGYTRTYSNQ-MTYATVKGGGHTAPEYRPAECYAMFQRWINHDPL 467 (467)
Q Consensus 412 ~~~~~w~~~~~~~Gy~k~~~~~-Ltf~~V~~AGHmvP~DqP~~a~~mi~~fl~~~~~ 467 (467)
++|++|+++++++||+|+| +| |||++|+||||||| |||++|++||++||.+++|
T Consensus 383 ~~~~~w~~~~q~aG~vk~y-~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 383 DDWRPWMIKGQIAGYTRTY-SNKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred CCeeeeEECCEeeeEEEEe-CCceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999 65 99999999999998 7999999999999999986
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=2.1e-108 Score=829.56 Aligned_cols=431 Identities=58% Similarity=1.078 Sum_probs=367.5
Q ss_pred hhhHHHHHHHHHHhhccCCCCCccccCCCCCCCCCCceeeeeEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchH
Q 012276 4 AKLCFSLLLLLQLCMQPAASHSTVKFLPGFQGPLPFELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCS 83 (467)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~v~~lp~~~~~~~~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~S 83 (467)
+|+.|++++++..+. ...+.|++|||+.++++++++|||++|+++.+.+||||||||+++|+++|||||||||||||
T Consensus 3 ~~~~~~~~~~~~~~~---~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~S 79 (433)
T PLN03016 3 LKIKFLLLLVLYHHV---DSASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCS 79 (433)
T ss_pred cchhHHHHHHHHhcc---cccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHH
Confidence 455555555444343 45688999999988899999999999987667899999999999999999999999999999
Q ss_pred HHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHh
Q 012276 84 AFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMD 163 (467)
Q Consensus 84 S~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~ 163 (467)
|+.|+|+|+|||+++.+..++...++++||+||++.|||||||||+||||||+.+.... .+|++.|+++++||+.||++
T Consensus 80 S~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~ 158 (433)
T PLN03016 80 CLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSR 158 (433)
T ss_pred HHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999854222222578999999999999999999999999998765443 44556679999999999999
Q ss_pred CCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCchhhccchhhhhhhcCCCCHHHHHHHH
Q 012276 164 HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLK 243 (467)
Q Consensus 164 fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~~~~~~~~~~a~~~gli~~~~~~~~~ 243 (467)
||+|+++||||+||||||+|||.+|++|+++|+.+..+.||||||+||||+++|..|..++.+|+|.+|+|++++++.++
T Consensus 159 ~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~ 238 (433)
T PLN03016 159 HPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMK 238 (433)
T ss_pred ChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHH
Confidence 99999999999999999999999999999988765567899999999999999999999999999999999999999999
Q ss_pred HHhCCcccccCCCChhHHHHHHHHHHHhcCCcccCCCccccccCCCCccccccCCccccccccccccCCCCCCCCCCCcc
Q 012276 244 ITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSHILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCR 323 (467)
Q Consensus 244 ~~c~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 323 (467)
+.|...+....+....|.++++.+..|.+++|.|+++.+.|.. . +. ..+.|.
T Consensus 239 ~~c~~~~~~~~~~~~~C~~~~~~~~~~~~~~n~yni~~~~~~~---~-----------~~--------------~~~~c~ 290 (433)
T PLN03016 239 RICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTPDCDV---T-----------NV--------------TSPDCY 290 (433)
T ss_pred HHhccccccCCCchHHHHHHHHHHHHHhcCCChhhccCCcccc---c-----------cc--------------CCCccc
Confidence 9997654333344568999999888888999999998665632 0 00 012454
Q ss_pred cccccchhcccCcHHHHHhcCCcCCCccccccccCCCCCCccCCchHHHHHHhhhcCCeEEEEeCCCccccCchhHHHHH
Q 012276 324 SYGYLLARYWDNDHNVRKALHIRQGSKGEWIRCNYDLPYTHEIGNSFSYHVSLSTKGYRSLIYSGDHDMLIPFLGTEAWI 403 (467)
Q Consensus 324 ~~~~~~~~~ylN~~~Vk~aL~v~~~~~~~w~~c~~~~~~~~d~~~~~~~~~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i 403 (467)
.+.......|||+++||+||||+.....+|..|+..+.+..|..++++.+..++.+++|||||+||.|++||+.|+++|+
T Consensus 291 ~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~v~~~~d~~~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi 370 (433)
T PLN03016 291 YYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWI 370 (433)
T ss_pred ccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCcccccccccchhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHH
Confidence 32222335799999999999998632257999998877777776777777777778999999999999999999999999
Q ss_pred HhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHHHHHcCCCC
Q 012276 404 KSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWINHDPL 467 (467)
Q Consensus 404 ~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~~fl~~~~~ 467 (467)
++|+|++.++|++|+++++++||+|+|.++|||++|++|||||| |||++|++||++||++++|
T Consensus 371 ~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 371 RSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred HhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999943599999999999998 7999999999999999986
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=5e-102 Score=794.86 Aligned_cols=403 Identities=37% Similarity=0.676 Sum_probs=325.6
Q ss_pred CCCCCCCCCceeeeeEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccc
Q 012276 31 PGFQGPLPFELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLR 110 (467)
Q Consensus 31 p~~~~~~~~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~ 110 (467)
||+..++++++|||||+|+++.+++||||||||+++|+++|||||||||||||||.|+|+|+|||+++.++ ..+++
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~----~~~l~ 76 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDG----PYTLE 76 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTS----TSEEE
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecc----ccccc
Confidence 78888899999999999997778999999999999999999999999999999999999999999999421 15899
Q ss_pred cCCCCcccccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHH
Q 012276 111 LNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQR 190 (467)
Q Consensus 111 ~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~ 190 (467)
.||||||+.||||||||||||||||+.+...+.++++++|+++++||++||.+||+++++||||+||||||+|||.+|.+
T Consensus 77 ~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~ 156 (415)
T PF00450_consen 77 DNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASY 156 (415)
T ss_dssp E-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHH
T ss_pred ccccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHh
Confidence 99999999999999999999999999877667789999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCcceeceeeEecCCccCchhhccchhhhhhhcCCCCHHHHHHHHHHhCCcccccCCCChhHHHHHHHHHH-
Q 012276 191 ISNENEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSK- 269 (467)
Q Consensus 191 i~~~~~~~~~~~inLkGi~igng~i~p~~~~~~~~~~a~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~~~~- 269 (467)
|+++++.+..+.||||||+||||++||..|..++.+|+|.+|+|++++++.+.+.|.... ........|.+.++.+..
T Consensus 157 i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~-~~~~~~~~c~~~~~~~~~~ 235 (415)
T PF00450_consen 157 ILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACP-QCQKAITECAAALDELSCQ 235 (415)
T ss_dssp HHHHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSH-SSSCCHHHHHHHHHHHHHH
T ss_pred hhhccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccc-cccchhhHHHHHHHhhhhh
Confidence 999997765679999999999999999999999999999999999999999999996431 122344689999888765
Q ss_pred -----HhcCCcccCCCccccccCCCCccccccCCccccccccccccCCCCCCCCCCCcccccccchhcccCcHHHHHhcC
Q 012276 270 -----LTSGVEKSHILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCRSYGYLLARYWDNDHNVRKALH 344 (467)
Q Consensus 270 -----~~~~~~~~~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~Vk~aL~ 344 (467)
+..++|.|+++...|.. . ... ........|. .......|||+++||++||
T Consensus 236 ~~~~~~~~~~n~Ydi~~~~~~~-~---------~~~-------------~~~~~~~~~~--~~~~~~~yln~~~Vr~aL~ 290 (415)
T PF00450_consen 236 YAISQCNGGINPYDIRQPCYNP-S---------RSS-------------YDNSPSNDPP--DDDYLEAYLNRPDVREALH 290 (415)
T ss_dssp CHHHHHHTTSETTSTTSEETT--S---------HCT-------------TCCCCTTTTT--CHHHHHHHHTSHHHHHHTT
T ss_pred cccccccCCcceeeeecccccc-c---------ccc-------------cccccccccc--chhhHHHHhccHHHHHhhC
Confidence 34799999999884421 0 000 0001112332 2233356999999999999
Q ss_pred CcCCCccccccccCCC---CCCcc-CCchHHHHHHhhhcCCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceee-
Q 012276 345 IRQGSKGEWIRCNYDL---PYTHE-IGNSFSYHVSLSTKGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWIL- 419 (467)
Q Consensus 345 v~~~~~~~w~~c~~~~---~~~~d-~~~~~~~~~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~- 419 (467)
|+.....+|..|+..+ ....+ ..++.+.++.||++++|||||+||.|++||+.|+++|+++|+|+++++|++|..
T Consensus 291 v~~~~~~~w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~ 370 (415)
T PF00450_consen 291 VPVDSNVNWQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRK 370 (415)
T ss_dssp -STTTSSS--SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEE
T ss_pred CCcccCCcccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCccccccccccc
Confidence 9732236899999866 12334 468888899999999999999999999999999999999999999999999987
Q ss_pred -CCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHHHHHcC
Q 012276 420 -HSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWINH 464 (467)
Q Consensus 420 -~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~~fl~~ 464 (467)
+++++||+|++ +||||++|++||||||+|||++|++||++||+|
T Consensus 371 ~~~~~~G~~k~~-~~ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 371 VNGQVAGYVKQY-GNLTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp TTCSEEEEEEEE-TTEEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred ccccccceeEEe-ccEEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 89999999998 899999999999999999999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1e-94 Score=739.19 Aligned_cols=386 Identities=27% Similarity=0.511 Sum_probs=323.6
Q ss_pred CCCCceeeeeEEeCC-CCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCC
Q 012276 36 PLPFELETGYVGVGE-SEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPY 114 (467)
Q Consensus 36 ~~~~~~~sGyl~v~~-~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~ 114 (467)
+.++++|||||+|++ ..+++||||||||+++|+++||+||||||||||||.|+|.|+|||+++.++ .++++|||
T Consensus 42 ~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~-----~~~~~n~~ 116 (462)
T PTZ00472 42 DPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETT-----GDIYNNTY 116 (462)
T ss_pred CCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCC-----CceeECCc
Confidence 456789999999975 457899999999999999999999999999999999999999999999752 36899999
Q ss_pred CcccccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhc
Q 012276 115 SWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (467)
Q Consensus 115 sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 194 (467)
|||+.+||||||||+||||||+... .+..+++++|+|+++||+.||++||+++++|+||+||||||+|+|.+|.+|+++
T Consensus 117 sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~ 195 (462)
T PTZ00472 117 SWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMG 195 (462)
T ss_pred ccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhh
Confidence 9999999999999999999998653 456788899999999999999999999999999999999999999999999999
Q ss_pred cccCCCcceeceeeEecCCccCchhhccchhhhhhh-------cCCCCHHHHHHHHHH---hCCcc----cccCCCChhH
Q 012276 195 NEEDIKPLINLQGYILGNPRTDMVVEQNSQIPFAHG-------MGLISNELYESLKIT---CGGEY----VNVDPNNKDC 260 (467)
Q Consensus 195 ~~~~~~~~inLkGi~igng~i~p~~~~~~~~~~a~~-------~gli~~~~~~~~~~~---c~~~~----~~~~~~~~~C 260 (467)
|+.+...+||||||+|||||+||..|..++.+|+|. +|+|++++++++.+. |.... .........|
T Consensus 196 n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c 275 (462)
T PTZ00472 196 NKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSC 275 (462)
T ss_pred ccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHH
Confidence 876666789999999999999999999999999996 589999998887653 42100 0001122346
Q ss_pred HHHHHHHHHH-----hcCCcccCCCccccccCCCCccccccCCccccccccccccCCCCCCCCCCCcccccccchhcccC
Q 012276 261 LNDIQTFSKL-----TSGVEKSHILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCRSYGYLLARYWDN 335 (467)
Q Consensus 261 ~~~~~~~~~~-----~~~~~~~~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ylN 335 (467)
..+...|.+. .+++|.|+++.. |. .+.|+.. .....|||
T Consensus 276 ~~a~~~c~~~~~~~~~~g~n~Ydi~~~-c~---------------------------------~~~c~~~--~~~~~yLN 319 (462)
T PTZ00472 276 SVARALCNEYIAVYSATGLNNYDIRKP-CI---------------------------------GPLCYNM--DNTIAFMN 319 (462)
T ss_pred HHHHHHHHHHHHHHHhcCCChhheecc-CC---------------------------------CCCccCH--HHHHHHhC
Confidence 5544333221 134555555543 31 2346432 23457999
Q ss_pred cHHHHHhcCCcCCCccccccccCCCC--CCccC-CchHHHHHHhhhcCCeEEEEeCCCccccCchhHHHHHHhcCCCCCC
Q 012276 336 DHNVRKALHIRQGSKGEWIRCNYDLP--YTHEI-GNSFSYHVSLSTKGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVD 412 (467)
Q Consensus 336 ~~~Vk~aL~v~~~~~~~w~~c~~~~~--~~~d~-~~~~~~~~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~ 412 (467)
+++||+||||+. .+|+.|+..+. +..|. .++.+.++.||++++|||||+||.|++||+.|+++|+++|+|++++
T Consensus 320 ~~~Vq~AL~v~~---~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~ 396 (462)
T PTZ00472 320 REDVQSSLGVKP---ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNA 396 (462)
T ss_pred CHHHHHHhCCCC---CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCcc
Confidence 999999999984 47999998763 44454 4566788999999999999999999999999999999999999987
Q ss_pred Cc-----cce-eeCCeeeeEEEEEec-----ceEEEEEcCCcccCCCCCcHHHHHHHHHHHcCCCC
Q 012276 413 DW-----RPW-ILHSQVAGYTRTYSN-----QMTYATVKGGGHTAPEYRPAECYAMFQRWINHDPL 467 (467)
Q Consensus 413 ~~-----~~w-~~~~~~~Gy~k~~~~-----~Ltf~~V~~AGHmvP~DqP~~a~~mi~~fl~~~~~ 467 (467)
+| ++| .++++++||+|++ + +|+|++|++||||||.|||+++++||++|+.+++|
T Consensus 397 ~f~~a~~~~w~~~~~~v~G~vk~~-~~~~~~~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 397 EFNAAPDVPFSAVDGRWAGLVRSA-ASNTSSGFSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred chhhcCccccEecCCEeceEEEEE-ecccCCCeEEEEECCCCccChhhHHHHHHHHHHHHHcCCCC
Confidence 66 689 5689999999998 6 89999999999999999999999999999999875
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=9.7e-78 Score=589.34 Aligned_cols=319 Identities=56% Similarity=1.052 Sum_probs=271.5
Q ss_pred ccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccC
Q 012276 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (467)
Q Consensus 119 ~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 198 (467)
.|||||||||+||||||+++...+ .+|+++|+|++.||+.||++||+|+++||||+||||||||||.||++|+++|+.+
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998765444 3455666999999999999999999999999999999999999999999988765
Q ss_pred CCcceeceeeEecCCccCchhhccchhhhhhhcCCCCHHHHHHHHHHhCCcccccCCCChhHHHHHHHHHHHhcCCcccC
Q 012276 199 IKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKITCGGEYVNVDPNNKDCLNDIQTFSKLTSGVEKSH 278 (467)
Q Consensus 199 ~~~~inLkGi~igng~i~p~~~~~~~~~~a~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~ 278 (467)
..+.||||||+|||||++|..|..++.+|+|.+|+|++++++.+++.|...+....+....|.++++.+..|.+.+|.|+
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 159 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHH 159 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHhh
Confidence 56789999999999999999999999999999999999999999999976543333345679999998888888999999
Q ss_pred CCccccccCCCCccccccCCccccccccccccCCCCCCCCCCCcccccccchhcccCcHHHHHhcCCcCCCccccccccC
Q 012276 279 ILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCRSYGYLLARYWDNDHNVRKALHIRQGSKGEWIRCNY 358 (467)
Q Consensus 279 i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~Vk~aL~v~~~~~~~w~~c~~ 358 (467)
++...|.. . +. ..+.|..+.......|||+++||+||||+.....+|..|+.
T Consensus 160 ~~~~~~~~---~-----------~~--------------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~ 211 (319)
T PLN02213 160 ILTPDCDV---T-----------NV--------------TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNR 211 (319)
T ss_pred cccCcccC---c-----------cC--------------CCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCc
Confidence 88654522 0 00 01245422222335799999999999998531257999998
Q ss_pred CCCCCccCCchHHHHHHhhhcCCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEE
Q 012276 359 DLPYTHEIGNSFSYHVSLSTKGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYAT 438 (467)
Q Consensus 359 ~~~~~~d~~~~~~~~~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~ 438 (467)
.+.+..|..++++.+..++.+++|||||+||.|++||+.|+++|+++|+|++.++|+||+++++++||+|+|+++|||++
T Consensus 212 ~v~~~~d~~~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~ 291 (319)
T PLN02213 212 TIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFAT 291 (319)
T ss_pred ccccccccccchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEE
Confidence 88777777677777777777899999999999999999999999999999999999999999999999999933499999
Q ss_pred EcCCcccCCCCCcHHHHHHHHHHHcCCCC
Q 012276 439 VKGGGHTAPEYRPAECYAMFQRWINHDPL 467 (467)
Q Consensus 439 V~~AGHmvP~DqP~~a~~mi~~fl~~~~~ 467 (467)
|+||||||| |||++|++||++||++++|
T Consensus 292 V~~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 292 IKAGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred EcCCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 999999998 7999999999999999886
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-69 Score=532.79 Aligned_cols=369 Identities=25% Similarity=0.432 Sum_probs=285.2
Q ss_pred eEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCcccccc
Q 012276 55 QLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFS 134 (467)
Q Consensus 55 ~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfS 134 (467)
.+|||+||++++|+++|+||||||||||||++|+|+|+||++|+.+. + +.--.||+||++++||||||||+|||||
T Consensus 86 ~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~--~--P~~~~NP~SW~~~adLvFiDqPvGTGfS 161 (498)
T COG2939 86 FFFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGT--S--PSYPDNPGSWLDFADLVFIDQPVGTGFS 161 (498)
T ss_pred eEEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCC--C--CCCCCCccccccCCceEEEecCcccCcc
Confidence 38899999999999999999999999999999999999999999852 1 1112699999999999999999999999
Q ss_pred CccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCC--CeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecC
Q 012276 135 YARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISN--PFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (467)
Q Consensus 135 y~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~--~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ign 212 (467)
++. ......+-..+.+|++.|++.||+.||++.+. |+||+||||||+|+|.||++|++++. ..+-.+||++++|||
T Consensus 162 ~a~-~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~-~~~~~~nlssvlign 239 (498)
T COG2939 162 RAL-GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNI-ALNGNVNLSSVLIGN 239 (498)
T ss_pred ccc-ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhcc-ccCCceEeeeeeecC
Confidence 973 23345677789999999999999999999887 99999999999999999999999862 223479999999999
Q ss_pred C-ccCchhhccchhhhhhhc----CCCCHHHHHHHHHHhCCcccccC-------CCChhHHHHHHHHHHHh------cC-
Q 012276 213 P-RTDMVVEQNSQIPFAHGM----GLISNELYESLKITCGGEYVNVD-------PNNKDCLNDIQTFSKLT------SG- 273 (467)
Q Consensus 213 g-~i~p~~~~~~~~~~a~~~----gli~~~~~~~~~~~c~~~~~~~~-------~~~~~C~~~~~~~~~~~------~~- 273 (467)
| +|+|..+...+.+++... +.++.+..+++++.|.+++.... ..-..|..+...+.... .+
T Consensus 240 g~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~~~~~~~~~~~r~~~ 319 (498)
T COG2939 240 GLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAYLTGLMREYVGRAGG 319 (498)
T ss_pred CcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHHHHhcchhhhccccc
Confidence 9 999999988899888644 55667788888888887653211 11135666655543211 11
Q ss_pred --CcccCCCccccccCCCCccccccCCccccccccccccCCCCCCCCCCCcccccccchhcccCcHHHHHhcCCcCCCcc
Q 012276 274 --VEKSHILEPHCQFFSPKPRASSRNRRSLNVNEQSQEFLDPEPTFPPIGCRSYGYLLARYWDNDHNVRKALHIRQGSKG 351 (467)
Q Consensus 274 --~~~~~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~Vk~aL~v~~~~~~ 351 (467)
+|.|++.+. |+. +. + ...|+.... .+..|++...++++++... .
T Consensus 320 ~~~n~y~~r~~-~~d--~g-------------------------~--~~~~y~~~~-~~ld~~~~~~~~~~~~~~~---d 365 (498)
T COG2939 320 RLLNVYDIREE-CRD--PG-------------------------L--GGSCYDTLS-TSLDYFNFDPEQEVNDPEV---D 365 (498)
T ss_pred cccccccchhh-cCC--CC-------------------------c--cccccccee-eccccccccchhccccccc---c
Confidence 233333322 221 00 0 023432211 2235788778888888664 4
Q ss_pred ccccccCCCC--C---CccC-CchHHHHHHhhhcCCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCcc-----ceee-
Q 012276 352 EWIRCNYDLP--Y---THEI-GNSFSYHVSLSTKGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWR-----PWIL- 419 (467)
Q Consensus 352 ~w~~c~~~~~--~---~~d~-~~~~~~~~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~-----~w~~- 419 (467)
.|..|+.++. | ..+. ..+...+..++.+++.+++|.|+.|.+|++.|++.|..+|+|.+...|. +|..
T Consensus 366 ~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~ 445 (498)
T COG2939 366 NISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSR 445 (498)
T ss_pred chhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccc
Confidence 6999997642 3 2332 3445556778888999999999999999999999999999999988773 4433
Q ss_pred -CCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHHHHHcC
Q 012276 420 -HSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWINH 464 (467)
Q Consensus 420 -~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~~fl~~ 464 (467)
..+..|-.+++ +|++|+.++.||||||.|+|+.+++|++.|+.+
T Consensus 446 ~t~e~~~~~~s~-~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 446 LTLEEMGGYKSY-RNLTFLRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred cchhhccccccc-CCceEEEEecCcceeecCChHHHHHHHHHHHhh
Confidence 45666666777 799999999999999999999999999999986
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.5e-67 Score=481.77 Aligned_cols=388 Identities=25% Similarity=0.405 Sum_probs=304.0
Q ss_pred eeeeeEEeCCCCCeeEEEEEeecCCCC-CCCCEEEEECCCCchHH-HhHHHHhhcCeEEeccCCCCCCCccccCCCCccc
Q 012276 41 LETGYVGVGESEEAQLFYYFVKSDKNP-KEDPLLLWLTGGPGCSA-FSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK 118 (467)
Q Consensus 41 ~~sGyl~v~~~~~~~lFy~f~es~~~~-~~~Pl~lWlnGGPG~SS-~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~ 118 (467)
...||+++.. ++|+|||++.+..+- ..+|+.|||+||||+|| .+|+|.|+||...+- .+|+.+|.+
T Consensus 3 ~~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~----------~~r~~TWlk 70 (414)
T KOG1283|consen 3 EDWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDG----------SPRDWTWLK 70 (414)
T ss_pred ccccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCC----------CcCCchhhh
Confidence 4589999986 799999998876544 78999999999999998 579999999998863 469999999
Q ss_pred ccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccC
Q 012276 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (467)
Q Consensus 119 ~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 198 (467)
.|||||||.|||+||||.+..+.|+++++++|.|+.+.|+.||..||||+.+||||+-|||||+.++.+|..+.+..+.+
T Consensus 71 ~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G 150 (414)
T KOG1283|consen 71 DADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG 150 (414)
T ss_pred hccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999998877654
Q ss_pred CCcceeceeeEecCCccCchhhccchhhhhhhcCCCCHHHHHHHHH---HhCC-----cccccCCCChhHHHHHH-HHHH
Q 012276 199 IKPLINLQGYILGNPRTDMVVEQNSQIPFAHGMGLISNELYESLKI---TCGG-----EYVNVDPNNKDCLNDIQ-TFSK 269 (467)
Q Consensus 199 ~~~~inLkGi~igng~i~p~~~~~~~~~~a~~~gli~~~~~~~~~~---~c~~-----~~~~~~~~~~~C~~~~~-~~~~ 269 (467)
+.+.|+.|+++|++||+|..-..++.+|+++++++|+..+++..+ .|.+ .+.. .+.|.--.+ -+.+
T Consensus 151 -~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~----AT~~Wg~~e~li~~ 225 (414)
T KOG1283|consen 151 -EIKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGG----ATGGWGGGENLISR 225 (414)
T ss_pred -ceeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCcccc----ccccccCcCcceee
Confidence 468999999999999999988899999999999999988776554 2321 2211 112222222 2344
Q ss_pred HhcCCcccCCCccccccCCCCccccccC--CccccccccccccCCCCCCCCCCCcccccccchhcccCcHHHHHhcCCcC
Q 012276 270 LTSGVEKSHILEPHCQFFSPKPRASSRN--RRSLNVNEQSQEFLDPEPTFPPIGCRSYGYLLARYWDNDHNVRKALHIRQ 347 (467)
Q Consensus 270 ~~~~~~~~~i~~~~c~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~Vk~aL~v~~ 347 (467)
.+.+++.|||+.+.... .+...+. ..+-...+| .-.... .+ ...+.+ ..+||-+ ||++|++.+
T Consensus 226 ~sn~VdfYNil~~t~~d----~~~~ss~~~~~~~~~~rr--l~~~~~----~~---~~~D~L-~~lM~g~-vrkkLgIip 290 (414)
T KOG1283|consen 226 ESNGVDFYNILTKTLGD----QYSLSSRAAMTPEEVMRR--LLVRFV----GD---EDRDKL-SDLMNGP-VRKKLGIIP 290 (414)
T ss_pred cccCcceeeeeccCCCc----chhhhhhhhcchHHHHHH--HHhccC----cc---hhHHHH-HHHhccc-ccccccccC
Confidence 56789999998663321 1111100 000000000 000000 00 011222 4578876 999999987
Q ss_pred CCccccccccCCCC--CCcc-CCchHHHHHHhhhcCCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCcc--cee---e
Q 012276 348 GSKGEWIRCNYDLP--YTHE-IGNSFSYHVSLSTKGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWR--PWI---L 419 (467)
Q Consensus 348 ~~~~~w~~c~~~~~--~~~d-~~~~~~~~~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~--~w~---~ 419 (467)
+. ..|-..+..+. ...| +.+.+..+.+||+++++|.||||++|.||++.|+++|+++|.|+....|+ +|+ +
T Consensus 291 ~~-~~wGgqsg~vFt~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~ 369 (414)
T KOG1283|consen 291 GG-VKWGGQSGDVFTKLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITV 369 (414)
T ss_pred CC-CcccCcCCchHHHhhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccc
Confidence 63 57877666542 3344 46788888999999999999999999999999999999999999998874 554 3
Q ss_pred CCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHHHHH
Q 012276 420 HSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWI 462 (467)
Q Consensus 420 ~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~~fl 462 (467)
+-..+||.|+| +||.|.+|..||||||.|+|+.|.+|++-+.
T Consensus 370 s~~l~gy~kty-knl~f~wilraghmvp~Dnp~~a~hmlr~vt 411 (414)
T KOG1283|consen 370 SRVLEGYEKTY-KNLSFFWILRAGHMVPADNPAAASHMLRHVT 411 (414)
T ss_pred eeecchhhhhh-ccceeEEeecccCcccCCCHHHHhhheeecc
Confidence 45789999999 9999999999999999999999999998654
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.18 E-value=2.7e-09 Score=102.35 Aligned_cols=129 Identities=22% Similarity=0.266 Sum_probs=80.3
Q ss_pred eeeeEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHh-HHHHhhcCeEEeccCCCCCCCccccCCCCccccc
Q 012276 42 ETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFS-GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEA 120 (467)
Q Consensus 42 ~sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~-g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~a 120 (467)
..++++++ +..+.|.-+. .+...|.||+++||||+++.+ ..+.+. +.. +..
T Consensus 3 ~~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~~----------------l~~------~g~ 54 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLREL----------------LKE------EGR 54 (288)
T ss_pred ccceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHHH----------------HHh------cCC
Confidence 34566654 3445554332 223358889999999998643 332211 111 137
Q ss_pred ceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCC
Q 012276 121 SILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIK 200 (467)
Q Consensus 121 nllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~ 200 (467)
+++.+|.| |.|.|.......-..+.++.++++..++.. . ..++++|.|+|+||..+..+|..-.
T Consensus 55 ~vi~~d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~liG~S~Gg~ia~~~a~~~p-------- 118 (288)
T TIGR01250 55 EVIMYDQL-GCGYSDQPDDSDELWTIDYFVDELEEVREK----L---GLDKFYLLGHSWGGMLAQEYALKYG-------- 118 (288)
T ss_pred EEEEEcCC-CCCCCCCCCcccccccHHHHHHHHHHHHHH----c---CCCcEEEEEeehHHHHHHHHHHhCc--------
Confidence 89999988 999986432211013445666666555442 2 2346999999999999988886432
Q ss_pred cceeceeeEecCCccC
Q 012276 201 PLINLQGYILGNPRTD 216 (467)
Q Consensus 201 ~~inLkGi~igng~i~ 216 (467)
..++++++.++...
T Consensus 119 --~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 119 --QHLKGLIISSMLDS 132 (288)
T ss_pred --cccceeeEeccccc
Confidence 23889999887654
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.17 E-value=6.7e-09 Score=101.69 Aligned_cols=141 Identities=18% Similarity=0.279 Sum_probs=90.0
Q ss_pred CCCccccCCCCCCCCCCceeeeeEEeCCCCC--eeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEecc
Q 012276 23 SHSTVKFLPGFQGPLPFELETGYVGVGESEE--AQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTV 100 (467)
Q Consensus 23 ~~~~v~~lp~~~~~~~~~~~sGyl~v~~~~~--~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~ 100 (467)
++.++.+||.+ | ..-.|+.+....+ ..++|.- ..++ +.|.||.++|.|+.++.+..+. |.
T Consensus 7 ~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~i~y~~---~G~~-~~~~lvliHG~~~~~~~w~~~~---~~----- 68 (302)
T PRK00870 7 PDSRFENLPDY----P--FAPHYVDVDDGDGGPLRMHYVD---EGPA-DGPPVLLLHGEPSWSYLYRKMI---PI----- 68 (302)
T ss_pred CcccccCCcCC----C--CCceeEeecCCCCceEEEEEEe---cCCC-CCCEEEEECCCCCchhhHHHHH---HH-----
Confidence 45677788865 2 2345788875323 3577663 2333 4688999999998888765444 11
Q ss_pred CCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccC
Q 012276 101 EYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYS 180 (467)
Q Consensus 101 ~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYg 180 (467)
|.. +..+++.+|.| |.|.|...... ...+.++.|+++.++|.. . ...++.|.|+|+|
T Consensus 69 --------L~~------~gy~vi~~Dl~-G~G~S~~~~~~-~~~~~~~~a~~l~~~l~~----l---~~~~v~lvGhS~G 125 (302)
T PRK00870 69 --------LAA------AGHRVIAPDLI-GFGRSDKPTRR-EDYTYARHVEWMRSWFEQ----L---DLTDVTLVCQDWG 125 (302)
T ss_pred --------HHh------CCCEEEEECCC-CCCCCCCCCCc-ccCCHHHHHHHHHHHHHH----c---CCCCEEEEEEChH
Confidence 111 13789999988 99999532211 112445556665555543 2 2458999999999
Q ss_pred CccHHHHHHHHHhccccCCCcceeceeeEecCCc
Q 012276 181 GITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (467)
Q Consensus 181 G~yvP~la~~i~~~~~~~~~~~inLkGi~igng~ 214 (467)
|..+-.+|.+--+ .++++++.++.
T Consensus 126 g~ia~~~a~~~p~----------~v~~lvl~~~~ 149 (302)
T PRK00870 126 GLIGLRLAAEHPD----------RFARLVVANTG 149 (302)
T ss_pred HHHHHHHHHhChh----------heeEEEEeCCC
Confidence 9998888864322 28899888764
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=99.14 E-value=6.7e-09 Score=100.16 Aligned_cols=124 Identities=14% Similarity=0.018 Sum_probs=81.9
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCccc-ccceeeecCCccc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK-EASILFVDSPVGT 131 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~-~anllfIDqPvGt 131 (467)
+..|+|.++++. +..+|+||.++|..++|..+-.+.+. +.+ -..++-+|.| |.
T Consensus 10 g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~~~~~~~~-----------------------l~~~g~~via~D~~-G~ 63 (276)
T PHA02857 10 NDYIYCKYWKPI--TYPKALVFISHGAGEHSGRYEELAEN-----------------------ISSLGILVFSHDHI-GH 63 (276)
T ss_pred CCEEEEEeccCC--CCCCEEEEEeCCCccccchHHHHHHH-----------------------HHhCCCEEEEccCC-CC
Confidence 678999877764 24469999999998877766444311 112 2689999977 99
Q ss_pred cccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEec
Q 012276 132 GFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILG 211 (467)
Q Consensus 132 GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ig 211 (467)
|.|..... ...+-....+|+.+++..+-+.+ ...+++|+|+|.||.-+..+|.+- .-+++|+++.
T Consensus 64 G~S~~~~~--~~~~~~~~~~d~~~~l~~~~~~~---~~~~~~lvG~S~GG~ia~~~a~~~----------p~~i~~lil~ 128 (276)
T PHA02857 64 GRSNGEKM--MIDDFGVYVRDVVQHVVTIKSTY---PGVPVFLLGHSMGATISILAAYKN----------PNLFTAMILM 128 (276)
T ss_pred CCCCCccC--CcCCHHHHHHHHHHHHHHHHhhC---CCCCEEEEEcCchHHHHHHHHHhC----------ccccceEEEe
Confidence 99964321 11232344566666665543333 356899999999998776666432 1138999999
Q ss_pred CCccCc
Q 012276 212 NPRTDM 217 (467)
Q Consensus 212 ng~i~p 217 (467)
+|.+++
T Consensus 129 ~p~~~~ 134 (276)
T PHA02857 129 SPLVNA 134 (276)
T ss_pred cccccc
Confidence 987653
No 12
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.12 E-value=4.6e-09 Score=99.17 Aligned_cols=116 Identities=19% Similarity=0.222 Sum_probs=79.0
Q ss_pred EEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCc
Q 012276 57 FYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYA 136 (467)
Q Consensus 57 Fy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~ 136 (467)
+|..+.. ..++.|+||+++|.+|++..+..+.+ .+ .+..+++-+|.| |.|.|..
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~~~~~~~----------------~l-------~~~~~vi~~D~~-G~G~S~~ 55 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSYWAPQLD----------------VL-------TQRFHVVTYDHR-GTGRSPG 55 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhHHHHHHH----------------HH-------HhccEEEEEcCC-CCCCCCC
Confidence 4555432 22467999999999888776644331 11 123799999988 9999965
Q ss_pred cCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccC
Q 012276 137 RTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (467)
Q Consensus 137 ~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~ 216 (467)
.... ..+.++.++++.+++... ...+++|+|+|+||..+..+|.+..+ .++++++.+++..
T Consensus 56 ~~~~--~~~~~~~~~~~~~~i~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~----------~v~~~i~~~~~~~ 116 (257)
T TIGR03611 56 ELPP--GYSIAHMADDVLQLLDAL-------NIERFHFVGHALGGLIGLQLALRYPE----------RLLSLVLINAWSR 116 (257)
T ss_pred CCcc--cCCHHHHHHHHHHHHHHh-------CCCcEEEEEechhHHHHHHHHHHChH----------HhHHheeecCCCC
Confidence 3322 234556667766666532 23579999999999999988875433 2899999888765
Q ss_pred c
Q 012276 217 M 217 (467)
Q Consensus 217 p 217 (467)
+
T Consensus 117 ~ 117 (257)
T TIGR03611 117 P 117 (257)
T ss_pred C
Confidence 4
No 13
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.12 E-value=5.6e-09 Score=101.76 Aligned_cols=122 Identities=18% Similarity=0.162 Sum_probs=84.8
Q ss_pred eEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceee
Q 012276 45 YVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILF 124 (467)
Q Consensus 45 yl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllf 124 (467)
|++++ +.+++|.-. .+ ..|.||+|+|.+++|.++..+.+. | .+..+++.
T Consensus 12 ~~~~~---~~~i~y~~~---G~--~~~~vlllHG~~~~~~~w~~~~~~----------------L-------~~~~~vi~ 60 (294)
T PLN02824 12 TWRWK---GYNIRYQRA---GT--SGPALVLVHGFGGNADHWRKNTPV----------------L-------AKSHRVYA 60 (294)
T ss_pred eEEEc---CeEEEEEEc---CC--CCCeEEEECCCCCChhHHHHHHHH----------------H-------HhCCeEEE
Confidence 56665 466766432 21 237899999999999887655521 1 23368999
Q ss_pred ecCCccccccCccCCCC----CccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCC
Q 012276 125 VDSPVGTGFSYARTPHA----SQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIK 200 (467)
Q Consensus 125 IDqPvGtGfSy~~~~~~----~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~ 200 (467)
+|.| |.|.|...+... ...+.++.|+++.++|... ...+++|.|+|.||..+-.+|.+--++
T Consensus 61 ~Dlp-G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~~------ 126 (294)
T PLN02824 61 IDLL-GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPEL------ 126 (294)
T ss_pred EcCC-CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChhh------
Confidence 9988 999997543211 1245566777777777643 235899999999999998888654332
Q ss_pred cceeceeeEecCCcc
Q 012276 201 PLINLQGYILGNPRT 215 (467)
Q Consensus 201 ~~inLkGi~igng~i 215 (467)
++++++.|+..
T Consensus 127 ----v~~lili~~~~ 137 (294)
T PLN02824 127 ----VRGVMLINISL 137 (294)
T ss_pred ----eeEEEEECCCc
Confidence 89999999864
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.06 E-value=7.8e-09 Score=99.24 Aligned_cols=123 Identities=20% Similarity=0.105 Sum_probs=80.5
Q ss_pred eEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceee
Q 012276 45 YVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILF 124 (467)
Q Consensus 45 yl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllf 124 (467)
|++++ +.+++|- + ..+.+.|.||+++|.+|.+..+..+.+ .+. +..+++.
T Consensus 10 ~~~~~---~~~~~~~--~--~g~~~~~~vv~~hG~~~~~~~~~~~~~----------------~l~-------~~~~vi~ 59 (278)
T TIGR03056 10 RVTVG---PFHWHVQ--D--MGPTAGPLLLLLHGTGASTHSWRDLMP----------------PLA-------RSFRVVA 59 (278)
T ss_pred eeeEC---CEEEEEE--e--cCCCCCCeEEEEcCCCCCHHHHHHHHH----------------HHh-------hCcEEEe
Confidence 44553 4555543 2 233456899999999888776543331 121 1378999
Q ss_pred ecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCccee
Q 012276 125 VDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLIN 204 (467)
Q Consensus 125 IDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~in 204 (467)
+|.| |.|.|...... ..+.+..|+++.++++. . ..++++|+|+|+||..+..+|.+.. -.
T Consensus 60 ~D~~-G~G~S~~~~~~--~~~~~~~~~~l~~~i~~----~---~~~~~~lvG~S~Gg~~a~~~a~~~p----------~~ 119 (278)
T TIGR03056 60 PDLP-GHGFTRAPFRF--RFTLPSMAEDLSALCAA----E---GLSPDGVIGHSAGAAIALRLALDGP----------VT 119 (278)
T ss_pred ecCC-CCCCCCCcccc--CCCHHHHHHHHHHHHHH----c---CCCCceEEEECccHHHHHHHHHhCC----------cc
Confidence 9977 99998654321 23555667777766643 2 2357899999999988887775432 23
Q ss_pred ceeeEecCCccCc
Q 012276 205 LQGYILGNPRTDM 217 (467)
Q Consensus 205 LkGi~igng~i~p 217 (467)
++++++.++..++
T Consensus 120 v~~~v~~~~~~~~ 132 (278)
T TIGR03056 120 PRMVVGINAALMP 132 (278)
T ss_pred cceEEEEcCcccc
Confidence 7899999887654
No 15
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.04 E-value=3.9e-08 Score=95.57 Aligned_cols=59 Identities=12% Similarity=0.090 Sum_probs=48.7
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
.++|||..|..|.+++.....+.+.+. . .+.++.+|.+|||+++.++|+...++|.
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~-----------------------i-p~~~~~~i~~aGH~~~~e~Pe~~~~~i~ 282 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRAT-----------------------F-PDHVLVELPNAKHFIQEDAPDRIAAAII 282 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHh-----------------------c-CCCeEEEcCCCcccccccCHHHHHHHHH
Confidence 699999999999988766543333331 2 4678899999999999999999999999
Q ss_pred HHH
Q 012276 460 RWI 462 (467)
Q Consensus 460 ~fl 462 (467)
+|+
T Consensus 283 ~~~ 285 (286)
T PRK03204 283 ERF 285 (286)
T ss_pred Hhc
Confidence 997
No 16
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.97 E-value=6.5e-08 Score=96.85 Aligned_cols=126 Identities=17% Similarity=0.160 Sum_probs=81.8
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHh-HHHHhhcCeEEeccCCCCCCCccccCCCCccc-ccceeeecCCcc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFS-GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK-EASILFVDSPVG 130 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~-g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~-~anllfIDqPvG 130 (467)
+..+|+..+...+ .+.+|+||.++|..+.++.+ -.+. +. +.+ -.+++-+|.| |
T Consensus 71 g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~---~~--------------------l~~~g~~v~~~D~~-G 125 (349)
T PLN02385 71 GVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIA---RK--------------------IASSGYGVFAMDYP-G 125 (349)
T ss_pred CCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHH---HH--------------------HHhCCCEEEEecCC-C
Confidence 6778886554322 23569999999987655432 1111 11 111 2789999998 9
Q ss_pred ccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEe
Q 012276 131 TGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYIL 210 (467)
Q Consensus 131 tGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~i 210 (467)
.|.|-... .+..+-++.++|+.++++.. ...+++...+++|+|+|+||..+-.+|.+-. -.++|+++
T Consensus 126 ~G~S~~~~--~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~p----------~~v~glVL 192 (349)
T PLN02385 126 FGLSEGLH--GYIPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQP----------NAWDGAIL 192 (349)
T ss_pred CCCCCCCC--CCcCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhCc----------chhhheeE
Confidence 99996432 22335556778877777653 3334455568999999999988776664321 12899999
Q ss_pred cCCccC
Q 012276 211 GNPRTD 216 (467)
Q Consensus 211 gng~i~ 216 (467)
.+|...
T Consensus 193 i~p~~~ 198 (349)
T PLN02385 193 VAPMCK 198 (349)
T ss_pred eccccc
Confidence 998653
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.94 E-value=2.5e-08 Score=94.68 Aligned_cols=104 Identities=18% Similarity=0.149 Sum_probs=76.2
Q ss_pred CCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCcc
Q 012276 65 KNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQT 144 (467)
Q Consensus 65 ~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~ 144 (467)
+.+.+.|.||+++|.+|.+..+..+.+. + .+..+++.+|.| |.|.|.... ..
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~~~~~~~~----------------l-------~~~~~vi~~D~~-G~G~s~~~~----~~ 62 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDNLGVLARD----------------L-------VNDHDIIQVDMR-NHGLSPRDP----VM 62 (255)
T ss_pred CCCCCCCCEEEECCCCCchhHHHHHHHH----------------H-------hhCCeEEEECCC-CCCCCCCCC----CC
Confidence 4556789999999999988776544321 1 234799999988 999886432 13
Q ss_pred ChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCC
Q 012276 145 GDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNP 213 (467)
Q Consensus 145 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng 213 (467)
+.++.++|+.++|..+ .-.+++|.|+|.||..+..+|.+..++ ++++++.++
T Consensus 63 ~~~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~~----------v~~lvli~~ 114 (255)
T PRK10673 63 NYPAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPDR----------IDKLVAIDI 114 (255)
T ss_pred CHHHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHhh----------cceEEEEec
Confidence 5567788888887653 234799999999999999998764333 888888764
No 18
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.94 E-value=6.4e-08 Score=96.02 Aligned_cols=138 Identities=14% Similarity=0.103 Sum_probs=85.6
Q ss_pred eeeeeEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCccc-c
Q 012276 41 LETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK-E 119 (467)
Q Consensus 41 ~~sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~-~ 119 (467)
...+++...+ +..|+|+-+........+|+||+++|..+.++-. +.+.. ..+++ -
T Consensus 32 ~~~~~~~~~d--g~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~--~~~~~--------------------~~L~~~G 87 (330)
T PLN02298 32 GSKSFFTSPR--GLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWT--FQSTA--------------------IFLAQMG 87 (330)
T ss_pred cccceEEcCC--CCEEEEEEEecCCCCCCceEEEEEcCCCCCccee--hhHHH--------------------HHHHhCC
Confidence 3466666543 6788886443222223568999999995433210 11000 01222 3
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCC
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 199 (467)
.+|+-+|+| |.|.|.... ....+.+..++|+..+++..- ...++...+++|+|+|.||..+-.++.+--
T Consensus 88 y~V~~~D~r-GhG~S~~~~--~~~~~~~~~~~D~~~~i~~l~-~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p------- 156 (330)
T PLN02298 88 FACFALDLE-GHGRSEGLR--AYVPNVDLVVEDCLSFFNSVK-QREEFQGLPRFLYGESMGGAICLLIHLANP------- 156 (330)
T ss_pred CEEEEecCC-CCCCCCCcc--ccCCCHHHHHHHHHHHHHHHH-hcccCCCCCEEEEEecchhHHHHHHHhcCc-------
Confidence 799999999 999985322 223355677888888887543 222333458999999999987766554211
Q ss_pred CcceeceeeEecCCccC
Q 012276 200 KPLINLQGYILGNPRTD 216 (467)
Q Consensus 200 ~~~inLkGi~igng~i~ 216 (467)
-.++|+++.+|+..
T Consensus 157 ---~~v~~lvl~~~~~~ 170 (330)
T PLN02298 157 ---EGFDGAVLVAPMCK 170 (330)
T ss_pred ---ccceeEEEeccccc
Confidence 13899999998764
No 19
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.94 E-value=6.2e-08 Score=94.43 Aligned_cols=120 Identities=16% Similarity=0.104 Sum_probs=82.5
Q ss_pred eEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceee
Q 012276 45 YVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILF 124 (467)
Q Consensus 45 yl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllf 124 (467)
+++++ +..++|.-. . +.|.||.++|.|+.+..+-.+.+ .| .+...++-
T Consensus 11 ~~~~~---g~~i~y~~~--G----~g~~vvllHG~~~~~~~w~~~~~----------------~L-------~~~~~via 58 (295)
T PRK03592 11 RVEVL---GSRMAYIET--G----EGDPIVFLHGNPTSSYLWRNIIP----------------HL-------AGLGRCLA 58 (295)
T ss_pred EEEEC---CEEEEEEEe--C----CCCEEEEECCCCCCHHHHHHHHH----------------HH-------hhCCEEEE
Confidence 35553 566777532 1 34789999999999988754441 12 22348999
Q ss_pred ecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCccee
Q 012276 125 VDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLIN 204 (467)
Q Consensus 125 IDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~in 204 (467)
+|.| |.|.|..... ..+.++.|+|+..++... ...+++|.|+|.||..+-.+|.+--+.
T Consensus 59 ~D~~-G~G~S~~~~~---~~~~~~~a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~~---------- 117 (295)
T PRK03592 59 PDLI-GMGASDKPDI---DYTFADHARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAARHPDR---------- 117 (295)
T ss_pred EcCC-CCCCCCCCCC---CCCHHHHHHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHHhChhh----------
Confidence 9988 9999964322 234556667766666542 235899999999999888888655433
Q ss_pred ceeeEecCCccCc
Q 012276 205 LQGYILGNPRTDM 217 (467)
Q Consensus 205 LkGi~igng~i~p 217 (467)
++++++.|+.+.+
T Consensus 118 v~~lil~~~~~~~ 130 (295)
T PRK03592 118 VRGIAFMEAIVRP 130 (295)
T ss_pred eeEEEEECCCCCC
Confidence 8999999986554
No 20
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.93 E-value=2.1e-07 Score=89.84 Aligned_cols=59 Identities=12% Similarity=0.143 Sum_probs=51.1
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
.++||+..|..|.+++..-.+++.+.+ .+..++.|.+|||+++.++|+...++|.
T Consensus 223 ~~Pvlli~G~~D~~v~~~~~~~~~~~~-------------------------~~~~~~~i~~agH~~~~e~p~~~~~~i~ 277 (282)
T TIGR03343 223 KAKTLVTWGRDDRFVPLDHGLKLLWNM-------------------------PDAQLHVFSRCGHWAQWEHADAFNRLVI 277 (282)
T ss_pred CCCEEEEEccCCCcCCchhHHHHHHhC-------------------------CCCEEEEeCCCCcCCcccCHHHHHHHHH
Confidence 689999999999999987666665553 3567789999999999999999999999
Q ss_pred HHHc
Q 012276 460 RWIN 463 (467)
Q Consensus 460 ~fl~ 463 (467)
+||.
T Consensus 278 ~fl~ 281 (282)
T TIGR03343 278 DFLR 281 (282)
T ss_pred HHhh
Confidence 9985
No 21
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.88 E-value=1.9e-07 Score=94.09 Aligned_cols=129 Identities=17% Similarity=0.169 Sum_probs=81.1
Q ss_pred ceeeeeEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccc
Q 012276 40 ELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKE 119 (467)
Q Consensus 40 ~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~ 119 (467)
++-+|+.... .+-.+||.- ..+...|.||.++|.|+.+..+-.+.+. | .+.
T Consensus 103 ~~~~~~~~~~--~~~~~~y~~----~G~~~~~~ivllHG~~~~~~~w~~~~~~----------------L-------~~~ 153 (383)
T PLN03084 103 KMGAQSQASS--DLFRWFCVE----SGSNNNPPVLLIHGFPSQAYSYRKVLPV----------------L-------SKN 153 (383)
T ss_pred cccceeEEcC--CceEEEEEe----cCCCCCCeEEEECCCCCCHHHHHHHHHH----------------H-------hcC
Confidence 3445544432 244565542 2334568999999999888776544421 1 123
Q ss_pred cceeeecCCccccccCccCCC-CCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccC
Q 012276 120 ASILFVDSPVGTGFSYARTPH-ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~-~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 198 (467)
.+++-+|.| |.|+|...... ....+.++.++++.++|+.. ...+++|+|+|+||..+-.+|.+--+
T Consensus 154 ~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~~~P~----- 220 (383)
T PLN03084 154 YHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYASAHPD----- 220 (383)
T ss_pred CEEEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHHHhChH-----
Confidence 799999988 99999654321 11235556667766666543 23479999999999665555543222
Q ss_pred CCcceeceeeEecCCcc
Q 012276 199 IKPLINLQGYILGNPRT 215 (467)
Q Consensus 199 ~~~~inLkGi~igng~i 215 (467)
.++++++.|+..
T Consensus 221 -----~v~~lILi~~~~ 232 (383)
T PLN03084 221 -----KIKKLILLNPPL 232 (383)
T ss_pred -----hhcEEEEECCCC
Confidence 289999999864
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.88 E-value=1.9e-07 Score=87.31 Aligned_cols=59 Identities=19% Similarity=0.281 Sum_probs=50.3
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
.++|++.+|..|.+++....+.+.+.+ .+.++.++.++||+++.++|+...+.++
T Consensus 193 ~~Pvlii~g~~D~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 247 (251)
T TIGR02427 193 AVPTLCIAGDQDGSTPPELVREIADLV-------------------------PGARFAEIRGAGHIPCVEQPEAFNAALR 247 (251)
T ss_pred CCCeEEEEeccCCcCChHHHHHHHHhC-------------------------CCceEEEECCCCCcccccChHHHHHHHH
Confidence 689999999999999988666665543 3456788999999999999999999999
Q ss_pred HHHc
Q 012276 460 RWIN 463 (467)
Q Consensus 460 ~fl~ 463 (467)
.|+.
T Consensus 248 ~fl~ 251 (251)
T TIGR02427 248 DFLR 251 (251)
T ss_pred HHhC
Confidence 9984
No 23
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.83 E-value=4e-07 Score=91.52 Aligned_cols=65 Identities=23% Similarity=0.398 Sum_probs=52.0
Q ss_pred CCeEEEEeCCCccccCchhH-HHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGT-EAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMF 458 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt-~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi 458 (467)
.++|||..|+.|.++|..+. .++++.|. +.. .+.++.+|.+|||+++.++|++..+.|
T Consensus 292 ~~PtLii~G~~D~~~p~~~~~~~~~~~l~--------------------~~i-p~~~l~~i~~aGH~~~~E~Pe~~~~~I 350 (360)
T PLN02679 292 SLPILVLWGDQDPFTPLDGPVGKYFSSLP--------------------SQL-PNVTLYVLEGVGHCPHDDRPDLVHEKL 350 (360)
T ss_pred CCCEEEEEeCCCCCcCchhhHHHHHHhhh--------------------ccC-CceEEEEcCCCCCCccccCHHHHHHHH
Confidence 69999999999999998753 33444431 112 457788999999999999999999999
Q ss_pred HHHHcCC
Q 012276 459 QRWINHD 465 (467)
Q Consensus 459 ~~fl~~~ 465 (467)
.+||.+.
T Consensus 351 ~~FL~~~ 357 (360)
T PLN02679 351 LPWLAQL 357 (360)
T ss_pred HHHHHhc
Confidence 9999764
No 24
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.83 E-value=2e-07 Score=89.97 Aligned_cols=117 Identities=15% Similarity=0.070 Sum_probs=78.5
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCcccc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtG 132 (467)
+..+.|+..+. . +..|.||+++|-++.+..+..+.+ .| .+..+++.+|.| |.|
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w~~~~~----------------~L-------~~~~~vi~~Dl~-G~G 63 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLELVFPFIE----------------AL-------DPDLEVIAFDVP-GVG 63 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHHHHHHHH----------------Hh-------ccCceEEEECCC-CCC
Confidence 56788886532 2 234678999997777776543331 11 134799999988 999
Q ss_pred ccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecC
Q 012276 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (467)
Q Consensus 133 fSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ign 212 (467)
.|-... . ..+.++.++++.++|... .-.+++|+|+|+||..+-.+|.+--+. ++++++.|
T Consensus 64 ~S~~~~-~--~~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p~~----------v~~lvl~~ 123 (276)
T TIGR02240 64 GSSTPR-H--PYRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYPER----------CKKLILAA 123 (276)
T ss_pred CCCCCC-C--cCcHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCHHH----------hhheEEec
Confidence 995322 1 234445566666655542 234799999999999888888654332 99999999
Q ss_pred CccC
Q 012276 213 PRTD 216 (467)
Q Consensus 213 g~i~ 216 (467)
+...
T Consensus 124 ~~~~ 127 (276)
T TIGR02240 124 TAAG 127 (276)
T ss_pred cCCc
Confidence 8764
No 25
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.80 E-value=3.9e-07 Score=92.41 Aligned_cols=127 Identities=19% Similarity=0.117 Sum_probs=84.5
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCcccc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtG 132 (467)
+..+|++.+.... .+.+|+||+++|.++.+..+-.+.+. +. .+-.+++-+|.| |.|
T Consensus 120 ~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~~~~a~~----------------L~------~~Gy~V~~~D~r-GhG 175 (395)
T PLN02652 120 RNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRYLHFAKQ----------------LT------SCGFGVYAMDWI-GHG 175 (395)
T ss_pred CCEEEEEEecCCC-CCCceEEEEECCchHHHHHHHHHHHH----------------HH------HCCCEEEEeCCC-CCC
Confidence 4578887665532 34478999999998876654333311 11 112689999988 999
Q ss_pred ccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecC
Q 012276 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (467)
Q Consensus 133 fSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ign 212 (467)
.|.... .+..+.+..++|+..+++..-..+| ..+++|+|+|+||..+..++. +.+ ..-.++|+++.+
T Consensus 176 ~S~~~~--~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~----~~~~v~glVL~s 242 (395)
T PLN02652 176 GSDGLH--GYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS----IEDKLEGIVLTS 242 (395)
T ss_pred CCCCCC--CCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC----cccccceEEEEC
Confidence 986532 2334556677888888877655555 348999999999987765542 111 011389999999
Q ss_pred CccC
Q 012276 213 PRTD 216 (467)
Q Consensus 213 g~i~ 216 (467)
|++.
T Consensus 243 P~l~ 246 (395)
T PLN02652 243 PALR 246 (395)
T ss_pred cccc
Confidence 8864
No 26
>PLN02578 hydrolase
Probab=98.69 E-value=9.8e-07 Score=88.52 Aligned_cols=112 Identities=16% Similarity=0.189 Sum_probs=74.7
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCcccc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtG 132 (467)
+.+++|.-.. +.|-||.++|-++.+..+..+.+ .+ .+..+++.+|.| |.|
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~w~~~~~----------------~l-------~~~~~v~~~D~~-G~G 124 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFHWRYNIP----------------EL-------AKKYKVYALDLL-GFG 124 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHHHHHHHH----------------HH-------hcCCEEEEECCC-CCC
Confidence 5667776322 23457899988776555533321 11 234789999988 999
Q ss_pred ccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecC
Q 012276 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (467)
Q Consensus 133 fSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ign 212 (467)
.|-.... ..+.+..++++.+|++... ..+++|.|+|+||..+..+|.+-.++ ++++++.|
T Consensus 125 ~S~~~~~---~~~~~~~a~~l~~~i~~~~-------~~~~~lvG~S~Gg~ia~~~A~~~p~~----------v~~lvLv~ 184 (354)
T PLN02578 125 WSDKALI---EYDAMVWRDQVADFVKEVV-------KEPAVLVGNSLGGFTALSTAVGYPEL----------VAGVALLN 184 (354)
T ss_pred CCCCccc---ccCHHHHHHHHHHHHHHhc-------cCCeEEEEECHHHHHHHHHHHhChHh----------cceEEEEC
Confidence 8854321 2344556677777776532 35899999999999888888765433 89999988
Q ss_pred Cc
Q 012276 213 PR 214 (467)
Q Consensus 213 g~ 214 (467)
+.
T Consensus 185 ~~ 186 (354)
T PLN02578 185 SA 186 (354)
T ss_pred CC
Confidence 64
No 27
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.68 E-value=6.6e-07 Score=90.03 Aligned_cols=114 Identities=16% Similarity=0.101 Sum_probs=74.1
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCcccc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtG 132 (467)
+..++|. +..+.+.|.||+++|.+|++..+..+.+. |. +..+++-+|.| |.|
T Consensus 118 ~~~i~~~----~~g~~~~~~vl~~HG~~~~~~~~~~~~~~----------------l~-------~~~~v~~~d~~-g~G 169 (371)
T PRK14875 118 GRTVRYL----RLGEGDGTPVVLIHGFGGDLNNWLFNHAA----------------LA-------AGRPVIALDLP-GHG 169 (371)
T ss_pred CcEEEEe----cccCCCCCeEEEECCCCCccchHHHHHHH----------------Hh-------cCCEEEEEcCC-CCC
Confidence 3456554 22334568899999999988876555421 11 12689999988 999
Q ss_pred ccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecC
Q 012276 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (467)
Q Consensus 133 fSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ign 212 (467)
.|-.... ..+.++.++++..+++ .. ...+++|.|+|+||..+..+|.+-.+ .++++++.+
T Consensus 170 ~s~~~~~---~~~~~~~~~~~~~~~~----~~---~~~~~~lvG~S~Gg~~a~~~a~~~~~----------~v~~lv~~~ 229 (371)
T PRK14875 170 ASSKAVG---AGSLDELAAAVLAFLD----AL---GIERAHLVGHSMGGAVALRLAARAPQ----------RVASLTLIA 229 (371)
T ss_pred CCCCCCC---CCCHHHHHHHHHHHHH----hc---CCccEEEEeechHHHHHHHHHHhCch----------heeEEEEEC
Confidence 8843221 2344555555555543 32 23579999999999999888865221 278888877
Q ss_pred Cc
Q 012276 213 PR 214 (467)
Q Consensus 213 g~ 214 (467)
|.
T Consensus 230 ~~ 231 (371)
T PRK14875 230 PA 231 (371)
T ss_pred cC
Confidence 65
No 28
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.67 E-value=4.1e-08 Score=90.13 Aligned_cols=104 Identities=21% Similarity=0.249 Sum_probs=72.5
Q ss_pred EEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhHhHHH
Q 012276 73 LLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHH 152 (467)
Q Consensus 73 ~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d 152 (467)
||.++|++|.+..+..+.+ .+. +..+++.+|.| |.|.|..... ....+-++.+++
T Consensus 1 vv~~hG~~~~~~~~~~~~~----------------~l~-------~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~ 55 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAE----------------ALA-------RGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAED 55 (228)
T ss_dssp EEEE-STTTTGGGGHHHHH----------------HHH-------TTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHH----------------HHh-------CCCEEEEEecC-Cccccccccc-cCCcchhhhhhh
Confidence 6899999999876655442 121 34789999988 9999975442 112344556666
Q ss_pred HHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 153 LDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 153 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
+.++|+ ... ..+++|+|+|+||..+-.++.+.-+ .++|+++.+|.....
T Consensus 56 l~~~l~----~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~----------~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 56 LAELLD----ALG---IKKVILVGHSMGGMIALRLAARYPD----------RVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHHHH----HTT---TSSEEEEEETHHHHHHHHHHHHSGG----------GEEEEEEESESSSHH
T ss_pred hhhccc----ccc---ccccccccccccccccccccccccc----------ccccceeeccccccc
Confidence 666554 332 2589999999999999888866433 399999999988654
No 29
>PRK10749 lysophospholipase L2; Provisional
Probab=98.66 E-value=4e-06 Score=83.24 Aligned_cols=125 Identities=15% Similarity=0.109 Sum_probs=80.6
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCcccc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtG 132 (467)
+..++|+.++.. ..+|+||.++|-.+.+..+.-+. +... .+-.+++-+|.| |.|
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y~~~~---~~l~-------------------~~g~~v~~~D~~-G~G 93 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVKYAELA---YDLF-------------------HLGYDVLIIDHR-GQG 93 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHHHHHHH---HHHH-------------------HCCCeEEEEcCC-CCC
Confidence 567888866532 34689999999866554443222 1111 112689999988 999
Q ss_pred ccCccCCC---CCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeE
Q 012276 133 FSYARTPH---ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYI 209 (467)
Q Consensus 133 fSy~~~~~---~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ 209 (467)
.|...... ....+-++.++|+..+++.....++ ..++++.|+|+||..+-.+|.+-. -.++|++
T Consensus 94 ~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~~p----------~~v~~lv 160 (330)
T PRK10749 94 RSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQRHP----------GVFDAIA 160 (330)
T ss_pred CCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHhCC----------CCcceEE
Confidence 99642211 1113455677777777776544333 468999999999987766665321 1279999
Q ss_pred ecCCccC
Q 012276 210 LGNPRTD 216 (467)
Q Consensus 210 igng~i~ 216 (467)
+.+|...
T Consensus 161 l~~p~~~ 167 (330)
T PRK10749 161 LCAPMFG 167 (330)
T ss_pred EECchhc
Confidence 9998754
No 30
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.66 E-value=2.7e-07 Score=87.85 Aligned_cols=59 Identities=17% Similarity=0.031 Sum_probs=49.4
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
.++|||.+|..|.++|....+...+.+ .+..++.|.++||+.+.++|+...+.+.
T Consensus 196 ~~P~lii~G~~D~~~~~~~~~~~~~~i-------------------------~~~~~~~i~~~gH~~~~e~p~~f~~~l~ 250 (256)
T PRK10349 196 SMPFLRLYGYLDGLVPRKVVPMLDKLW-------------------------PHSESYIFAKAAHAPFISHPAEFCHLLV 250 (256)
T ss_pred CCCeEEEecCCCccCCHHHHHHHHHhC-------------------------CCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 689999999999999887655444432 4567799999999999999999999999
Q ss_pred HHHc
Q 012276 460 RWIN 463 (467)
Q Consensus 460 ~fl~ 463 (467)
+|-.
T Consensus 251 ~~~~ 254 (256)
T PRK10349 251 ALKQ 254 (256)
T ss_pred HHhc
Confidence 8854
No 31
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.65 E-value=1.1e-06 Score=81.78 Aligned_cols=58 Identities=14% Similarity=-0.007 Sum_probs=49.2
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
..+|||.+|..|.+++....+.+.+.+ .+-++..+.++||+++.++|+...+.|.
T Consensus 188 ~~Pvlii~g~~D~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 242 (245)
T TIGR01738 188 SVPFLRLYGYLDGLVPAKVVPYLDKLA-------------------------PHSELYIFAKAAHAPFLSHAEAFCALLV 242 (245)
T ss_pred CCCEEEEeecCCcccCHHHHHHHHHhC-------------------------CCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 689999999999999988766555443 2456688999999999999999999999
Q ss_pred HHH
Q 012276 460 RWI 462 (467)
Q Consensus 460 ~fl 462 (467)
+||
T Consensus 243 ~fi 245 (245)
T TIGR01738 243 AFK 245 (245)
T ss_pred hhC
Confidence 986
No 32
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.61 E-value=5.1e-06 Score=84.71 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=71.0
Q ss_pred CCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChh
Q 012276 68 KEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDF 147 (467)
Q Consensus 68 ~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~ 147 (467)
.+.|.||.++|.++.+..+.... . .+ .+..+++-+|.| |.|.|..... ...+.+
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~-------~---------~L-------~~~~~vi~~D~r-G~G~S~~~~~--~~~~~~ 156 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNF-------D---------AL-------ASRFRVIAIDQL-GWGGSSRPDF--TCKSTE 156 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHH-------H---------HH-------HhCCEEEEECCC-CCCCCCCCCc--ccccHH
Confidence 46799999999988766543221 0 12 223689999988 9998843211 112333
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
++.+.+.+.+..|.+.. ...+++|.|+|+||..+-.+|.+-.+ .++++++.++..
T Consensus 157 ~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~----------~v~~lvl~~p~~ 211 (402)
T PLN02894 157 ETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHPE----------HVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCch----------hhcEEEEECCcc
Confidence 44445566666666543 23479999999999887777754322 288999988764
No 33
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.60 E-value=2.9e-06 Score=81.28 Aligned_cols=118 Identities=19% Similarity=0.197 Sum_probs=80.2
Q ss_pred CceeeeeEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCccc
Q 012276 39 FELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK 118 (467)
Q Consensus 39 ~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~ 118 (467)
....-+|+.++ + +++++.|. .+++.|+++.|+|=|=.+=.+=+-. ..|. ..
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wyswr~q~----------------~~la------~~ 70 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSWRHQI----------------PGLA------SR 70 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhhhhhh----------------hhhh------hc
Confidence 34567788875 3 88888765 6789999999999987664431111 0011 01
Q ss_pred ccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhc
Q 012276 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (467)
Q Consensus 119 ~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 194 (467)
-..++.+|.+ |-|+|-+.... ...+-...+.|+..+|... ....+++.|++||+.-+=.+|..-.++
T Consensus 71 ~~rviA~Dlr-GyG~Sd~P~~~-~~Yt~~~l~~di~~lld~L-------g~~k~~lvgHDwGaivaw~la~~~Per 137 (322)
T KOG4178|consen 71 GYRVIAPDLR-GYGFSDAPPHI-SEYTIDELVGDIVALLDHL-------GLKKAFLVGHDWGAIVAWRLALFYPER 137 (322)
T ss_pred ceEEEecCCC-CCCCCCCCCCc-ceeeHHHHHHHHHHHHHHh-------ccceeEEEeccchhHHHHHHHHhChhh
Confidence 1678999988 99999765431 1234455666666666432 245799999999999998888776665
No 34
>PRK06489 hypothetical protein; Provisional
Probab=98.58 E-value=7.1e-06 Score=82.48 Aligned_cols=59 Identities=15% Similarity=0.106 Sum_probs=47.1
Q ss_pred CCeEEEEeCCCccccCchhH--HHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCC----cccCCCCCcHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGT--EAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGG----GHTAPEYRPAE 453 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt--~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~A----GHmvP~DqP~~ 453 (467)
.++|||.+|+.|.++|.... ++..+.+ .+-++++|.+| ||++. ++|+.
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~i-------------------------p~a~l~~i~~a~~~~GH~~~-e~P~~ 345 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKRV-------------------------KHGRLVLIPASPETRGHGTT-GSAKF 345 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHhC-------------------------cCCeEEEECCCCCCCCcccc-cCHHH
Confidence 68999999999999987654 3333332 34567899996 99985 89999
Q ss_pred HHHHHHHHHcC
Q 012276 454 CYAMFQRWINH 464 (467)
Q Consensus 454 a~~mi~~fl~~ 464 (467)
..+.|.+||..
T Consensus 346 ~~~~i~~FL~~ 356 (360)
T PRK06489 346 WKAYLAEFLAQ 356 (360)
T ss_pred HHHHHHHHHHh
Confidence 99999999975
No 35
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.56 E-value=2e-06 Score=82.75 Aligned_cols=133 Identities=14% Similarity=0.179 Sum_probs=85.8
Q ss_pred eeeeEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccc
Q 012276 42 ETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEAS 121 (467)
Q Consensus 42 ~sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~an 121 (467)
.+-|+.+... .. =|.++-...+++++-++.++|= |++++ +|. +|=-+..+.-|
T Consensus 66 ~~~~v~i~~~-~~---iw~~~~~~~~~~~~plVliHGy-GAg~g--~f~--------------------~Nf~~La~~~~ 118 (365)
T KOG4409|consen 66 SKKYVRIPNG-IE---IWTITVSNESANKTPLVLIHGY-GAGLG--LFF--------------------RNFDDLAKIRN 118 (365)
T ss_pred ceeeeecCCC-ce---eEEEeecccccCCCcEEEEecc-chhHH--HHH--------------------HhhhhhhhcCc
Confidence 3556666532 22 2333323333556666678864 55543 222 12223344789
Q ss_pred eeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCc
Q 012276 122 ILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKP 201 (467)
Q Consensus 122 llfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~ 201 (467)
|-.||+| |-|+|.... +..+.+.+-+.|.+-+.+|..+.. + .+.+|.|+|+||..+...|.+--++
T Consensus 119 vyaiDll-G~G~SSRP~---F~~d~~~~e~~fvesiE~WR~~~~-L--~KmilvGHSfGGYLaa~YAlKyPer------- 184 (365)
T KOG4409|consen 119 VYAIDLL-GFGRSSRPK---FSIDPTTAEKEFVESIEQWRKKMG-L--EKMILVGHSFGGYLAAKYALKYPER------- 184 (365)
T ss_pred eEEeccc-CCCCCCCCC---CCCCcccchHHHHHHHHHHHHHcC-C--cceeEeeccchHHHHHHHHHhChHh-------
Confidence 9999988 999996543 223333444578899999987653 3 3799999999999888877666555
Q ss_pred ceeceeeEecCCccCch
Q 012276 202 LINLQGYILGNPRTDMV 218 (467)
Q Consensus 202 ~inLkGi~igng~i~p~ 218 (467)
++-++|.+||--++
T Consensus 185 ---V~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 185 ---VEKLILVSPWGFPE 198 (365)
T ss_pred ---hceEEEeccccccc
Confidence 88999999997665
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.53 E-value=9.1e-07 Score=82.40 Aligned_cols=105 Identities=24% Similarity=0.262 Sum_probs=68.4
Q ss_pred CCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhHh
Q 012276 70 DPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQ 149 (467)
Q Consensus 70 ~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~ 149 (467)
+|.||.++|.+|.+..+-.+.+ .|. +..+++-+|.| |.|.|..... ....+.++.
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~----------------~L~-------~~~~v~~~d~~-g~G~s~~~~~-~~~~~~~~~ 55 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIE----------------LLG-------PHFRCLAIDLP-GHGSSQSPDE-IERYDFEEA 55 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHH----------------Hhc-------ccCeEEEEcCC-CCCCCCCCCc-cChhhHHHH
Confidence 4889999999988876543321 111 23789999977 9999854321 112344455
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 150 VHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 150 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
++++ +..+.+.. ..++++|.|+|+||..+..+|.+.-+ .++++++.++..
T Consensus 56 ~~~~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~----------~v~~lil~~~~~ 105 (251)
T TIGR03695 56 AQDI---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYPE----------RVQGLILESGSP 105 (251)
T ss_pred HHHH---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCch----------heeeeEEecCCC
Confidence 5552 23333333 24689999999999998888875422 388999888754
No 37
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.49 E-value=2e-05 Score=81.50 Aligned_cols=130 Identities=18% Similarity=0.168 Sum_probs=80.8
Q ss_pred eeeEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHH-HHhhcCeEEeccCCCCCCCccccCCCCcccccc
Q 012276 43 TGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGL-AYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEAS 121 (467)
Q Consensus 43 sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~-~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~an 121 (467)
.-|+..+ +..|||+....... ...|.||+++|.+|.++++.. +.+ .+.. .+.+...
T Consensus 178 ~~~~~~~---~~~l~~~~~gp~~~-~~k~~VVLlHG~~~s~~~W~~~~~~----------------~L~~---~~~~~yr 234 (481)
T PLN03087 178 TSWLSSS---NESLFVHVQQPKDN-KAKEDVLFIHGFISSSAFWTETLFP----------------NFSD---AAKSTYR 234 (481)
T ss_pred eeeEeeC---CeEEEEEEecCCCC-CCCCeEEEECCCCccHHHHHHHHHH----------------HHHH---HhhCCCE
Confidence 3455554 45788886554322 234789999999999887642 110 0110 1234578
Q ss_pred eeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCc
Q 012276 122 ILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKP 201 (467)
Q Consensus 122 llfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~ 201 (467)
++.+|.| |.|.|-..... ..+.++.++++. +.+++.. ...+++|.|+|+||..+-.+|.+-.+.
T Consensus 235 Via~Dl~-G~G~S~~p~~~--~ytl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe~------- 298 (481)
T PLN03087 235 LFAVDLL-GFGRSPKPADS--LYTLREHLEMIE---RSVLERY---KVKSFHIVAHSLGCILALALAVKHPGA------- 298 (481)
T ss_pred EEEECCC-CCCCCcCCCCC--cCCHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChHh-------
Confidence 9999988 99988533211 224444455442 2333332 245899999999999998888754332
Q ss_pred ceeceeeEecCCc
Q 012276 202 LINLQGYILGNPR 214 (467)
Q Consensus 202 ~inLkGi~igng~ 214 (467)
++++++.++-
T Consensus 299 ---V~~LVLi~~~ 308 (481)
T PLN03087 299 ---VKSLTLLAPP 308 (481)
T ss_pred ---ccEEEEECCC
Confidence 7899988863
No 38
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.46 E-value=2.2e-06 Score=85.62 Aligned_cols=61 Identities=13% Similarity=0.162 Sum_probs=51.9
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcC-CcccCCCCCcHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKG-GGHTAPEYRPAECYAMF 458 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~-AGHmvP~DqP~~a~~mi 458 (467)
.+++||..|..|.+++....++..+.+. .+-.+++|.+ |||+++.++|++...+|
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~------------------------p~a~l~~i~~~aGH~~~lE~Pe~~~~~l 332 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG------------------------PRGSLRVLRSPYGHDAFLKETDRIDAIL 332 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC------------------------CCCeEEEEeCCccHHHHhcCHHHHHHHH
Confidence 6899999999999999887777777641 2456688874 99999999999999999
Q ss_pred HHHHcC
Q 012276 459 QRWINH 464 (467)
Q Consensus 459 ~~fl~~ 464 (467)
..||..
T Consensus 333 ~~FL~~ 338 (343)
T PRK08775 333 TTALRS 338 (343)
T ss_pred HHHHHh
Confidence 999975
No 39
>PRK07581 hypothetical protein; Validated
Probab=98.44 E-value=7.3e-06 Score=81.64 Aligned_cols=59 Identities=14% Similarity=0.103 Sum_probs=51.4
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcC-CcccCCCCCcHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKG-GGHTAPEYRPAECYAMF 458 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~-AGHmvP~DqP~~a~~mi 458 (467)
.++|||..|+.|.+++....+.+.+.+ .+.++++|.+ |||+++.+||+....++
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~i-------------------------p~a~l~~i~~~~GH~~~~~~~~~~~~~~ 329 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALI-------------------------PNAELRPIESIWGHLAGFGQNPADIAFI 329 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC-------------------------CCCeEEEeCCCCCccccccCcHHHHHHH
Confidence 689999999999999998877776654 2356688998 99999999999999999
Q ss_pred HHHHc
Q 012276 459 QRWIN 463 (467)
Q Consensus 459 ~~fl~ 463 (467)
++||.
T Consensus 330 ~~~~~ 334 (339)
T PRK07581 330 DAALK 334 (339)
T ss_pred HHHHH
Confidence 99985
No 40
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.41 E-value=4.4e-05 Score=75.88 Aligned_cols=151 Identities=16% Similarity=0.082 Sum_probs=87.0
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHh--------hcCeEEeccCCCCCCCccccC---CCCc-cccc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYE--------IGPVNFNTVEYNGSLPTLRLN---PYSW-TKEA 120 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E--------~GP~~~~~~~~~~~~~~l~~N---~~sW-~~~a 120 (467)
+..|+++.++.. ..+.+|+.++|==+-+ ..- +++ -+|+.|+.+.+ ...+ -... .+-.
T Consensus 7 g~~l~~~~~~~~---~~kg~v~i~HG~~eh~-~~~-~~~~~~~~~~~~~~~~~~~~ry------~~y~~~~~~~l~~~G~ 75 (332)
T TIGR01607 7 GLLLKTYSWIVK---NAIGIIVLIHGLKSHL-RLQ-FLKINAKIVNNDRAVLIDTDNY------YIYKDSWIENFNKNGY 75 (332)
T ss_pred CCeEEEeeeecc---CCeEEEEEECCCchhh-hhh-hhhcCcccCCCCeeEEEcCCcc------eEeeHHHHHHHHHCCC
Confidence 566887766543 2357999999853333 211 111 13444432100 0000 0012 2347
Q ss_pred ceeeecCCccccccCccCC-CCCccChhHhHHHHHHHHHHHHHhC----------------CCCC-CCCeEEEecccCCc
Q 012276 121 SILFVDSPVGTGFSYARTP-HASQTGDFKQVHHLDQFLRKWLMDH----------------PEFI-SNPFYVGGDSYSGI 182 (467)
Q Consensus 121 nllfIDqPvGtGfSy~~~~-~~~~~~~~~~a~d~~~fL~~f~~~f----------------p~~~-~~~~yi~GESYgG~ 182 (467)
+|+-+|.| |.|.|.+... .....+-++.++|+..+++..-+.. .++. +.|+||.|+|.||.
T Consensus 76 ~V~~~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~ 154 (332)
T TIGR01607 76 SVYGLDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGN 154 (332)
T ss_pred cEEEeccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccH
Confidence 89999987 9999976432 1222456677888888887653310 0222 56999999999999
Q ss_pred cHHHHHHHHHhccccCCCcceeceeeEecCCccCc
Q 012276 183 TVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 183 yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p 217 (467)
.+..++....+.... .....++|+++.+|.+..
T Consensus 155 i~~~~~~~~~~~~~~--~~~~~i~g~i~~s~~~~i 187 (332)
T TIGR01607 155 IALRLLELLGKSNEN--NDKLNIKGCISLSGMISI 187 (332)
T ss_pred HHHHHHHHhcccccc--ccccccceEEEeccceEE
Confidence 887777655332100 012358999988888743
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.36 E-value=2.3e-05 Score=92.87 Aligned_cols=108 Identities=16% Similarity=0.158 Sum_probs=72.7
Q ss_pred CCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCC-----C
Q 012276 66 NPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTP-----H 140 (467)
Q Consensus 66 ~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~-----~ 140 (467)
+.++.|.||+|+|.+|++..+-.+.+ .+ .+..+++.+|.| |.|.|..... .
T Consensus 1367 ~~~~~~~vVllHG~~~s~~~w~~~~~----------------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~ 1422 (1655)
T PLN02980 1367 QNAEGSVVLFLHGFLGTGEDWIPIMK----------------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQT 1422 (1655)
T ss_pred CCCCCCeEEEECCCCCCHHHHHHHHH----------------HH-------hCCCEEEEEcCC-CCCCCCCccccccccc
Confidence 34457899999999999987644431 11 123689999988 9999864321 0
Q ss_pred CCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCc
Q 012276 141 ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (467)
Q Consensus 141 ~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~ 214 (467)
....+.+..|+++.+++.. +...+++|+|+|+||..+-.+|.+.-++ ++++++.++.
T Consensus 1423 ~~~~si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~~----------V~~lVlis~~ 1479 (1655)
T PLN02980 1423 EPTLSVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSDK----------IEGAVIISGS 1479 (1655)
T ss_pred cccCCHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChHh----------hCEEEEECCC
Confidence 1123445566666666543 2235899999999999888888654332 7888887764
No 42
>PLN02965 Probable pheophorbidase
Probab=98.35 E-value=1.3e-05 Score=76.35 Aligned_cols=59 Identities=8% Similarity=0.093 Sum_probs=50.1
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
.+++|+..|..|.+++....++..+.+ .+-+++.+.+|||+...++|+...++|.
T Consensus 193 ~vP~lvi~g~~D~~~~~~~~~~~~~~~-------------------------~~a~~~~i~~~GH~~~~e~p~~v~~~l~ 247 (255)
T PLN02965 193 KVPRVYIKTAKDNLFDPVRQDVMVENW-------------------------PPAQTYVLEDSDHSAFFSVPTTLFQYLL 247 (255)
T ss_pred CCCEEEEEcCCCCCCCHHHHHHHHHhC-------------------------CcceEEEecCCCCchhhcCHHHHHHHHH
Confidence 799999999999999987666655553 2345688999999999999999999999
Q ss_pred HHHc
Q 012276 460 RWIN 463 (467)
Q Consensus 460 ~fl~ 463 (467)
+|+.
T Consensus 248 ~~~~ 251 (255)
T PLN02965 248 QAVS 251 (255)
T ss_pred HHHH
Confidence 9985
No 43
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.25 E-value=7.4e-06 Score=88.14 Aligned_cols=128 Identities=18% Similarity=0.244 Sum_probs=79.9
Q ss_pred CeeEEEEEeecCC-CCC-CCCEEEEECCCCchHHHhH--HHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCC
Q 012276 53 EAQLFYYFVKSDK-NPK-EDPLLLWLTGGPGCSAFSG--LAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSP 128 (467)
Q Consensus 53 ~~~lFy~f~es~~-~~~-~~Pl~lWlnGGPG~SS~~g--~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqP 128 (467)
+..+..|++...+ ++. .-|+|++++||| +++.+ ...|.= .=+.+-..||+++.-
T Consensus 375 G~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~~~~~~~~~~q--------------------~~~~~G~~V~~~n~R 432 (620)
T COG1506 375 GETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQVGYSFNPEIQ--------------------VLASAGYAVLAPNYR 432 (620)
T ss_pred CCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccccccccchhhH--------------------HHhcCCeEEEEeCCC
Confidence 6689999887543 332 359999999999 44443 111111 112344789999955
Q ss_pred ccccccCc--cCCC-CCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceec
Q 012276 129 VGTGFSYA--RTPH-ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINL 205 (467)
Q Consensus 129 vGtGfSy~--~~~~-~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inL 205 (467)
--+||+.. .... ++.. ...+|+..++. |+.+.|..-...+.|+|.||||...-.++.+-- -+
T Consensus 433 GS~GyG~~F~~~~~~~~g~---~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-----------~f 497 (620)
T COG1506 433 GSTGYGREFADAIRGDWGG---VDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-----------RF 497 (620)
T ss_pred CCCccHHHHHHhhhhccCC---ccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-----------hh
Confidence 44555432 1111 1111 23567888888 888999887778999999999977655553221 26
Q ss_pred eeeEecCCccCc
Q 012276 206 QGYILGNPRTDM 217 (467)
Q Consensus 206 kGi~igng~i~p 217 (467)
+..+...|.++.
T Consensus 498 ~a~~~~~~~~~~ 509 (620)
T COG1506 498 KAAVAVAGGVDW 509 (620)
T ss_pred heEEeccCcchh
Confidence 666666665544
No 44
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.21 E-value=7e-06 Score=80.55 Aligned_cols=127 Identities=21% Similarity=0.322 Sum_probs=79.4
Q ss_pred eeeEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccce
Q 012276 43 TGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASI 122 (467)
Q Consensus 43 sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anl 122 (467)
.+|+.+.+ +..++|.-. ..++ .|-||.++||||.++...... . + + .+..++
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~~~~~-----~------------~--~----~~~~~v 56 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDPGCRR-----F------------F--D----PETYRI 56 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCCHHHHh-----c------------c--C----ccCCEE
Confidence 57888865 567888642 2233 345688999999765321000 0 0 1 134799
Q ss_pred eeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcc
Q 012276 123 LFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPL 202 (467)
Q Consensus 123 lfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~ 202 (467)
+-+|.| |.|.|..... ....+.++.++++..++ +.. .-.+++++|+||||..+-.+|.+-.+.
T Consensus 57 i~~D~~-G~G~S~~~~~-~~~~~~~~~~~dl~~l~----~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~-------- 119 (306)
T TIGR01249 57 VLFDQR-GCGKSTPHAC-LEENTTWDLVADIEKLR----EKL---GIKNWLVFGGSWGSTLALAYAQTHPEV-------- 119 (306)
T ss_pred EEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHH----HHc---CCCCEEEEEECHHHHHHHHHHHHChHh--------
Confidence 999988 9999974321 11233345555554444 332 234799999999998888877654332
Q ss_pred eeceeeEecCCccCc
Q 012276 203 INLQGYILGNPRTDM 217 (467)
Q Consensus 203 inLkGi~igng~i~p 217 (467)
++++++.+.++..
T Consensus 120 --v~~lvl~~~~~~~ 132 (306)
T TIGR01249 120 --VTGLVLRGIFLLR 132 (306)
T ss_pred --hhhheeeccccCC
Confidence 7888888877653
No 45
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.14 E-value=0.0001 Score=71.90 Aligned_cols=136 Identities=19% Similarity=0.250 Sum_probs=92.5
Q ss_pred eeeeeEEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCccccc
Q 012276 41 LETGYVGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEA 120 (467)
Q Consensus 41 ~~sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~a 120 (467)
..-|+....+ +..++|+-+++.+++. .+|++++|.=.++.-+-.+.+ .+..+- .
T Consensus 9 ~~~~~~~~~d--~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~ry~~la~----------------~l~~~G------~ 62 (298)
T COG2267 9 RTEGYFTGAD--GTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGRYEELAD----------------DLAARG------F 62 (298)
T ss_pred cccceeecCC--CceEEEEeecCCCCCC--cEEEEecCchHHHHHHHHHHH----------------HHHhCC------C
Confidence 4455555543 6789999887765544 899999999666654433221 111122 6
Q ss_pred ceeeecCCccccccC-ccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCC
Q 012276 121 SILFVDSPVGTGFSY-ARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (467)
Q Consensus 121 nllfIDqPvGtGfSy-~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 199 (467)
+++=+|+| |.|.|. +.. ....+-++.-.|+..|++..-...| ..|+||+|+|.||..+...+.+-.
T Consensus 63 ~V~~~D~R-GhG~S~r~~r--g~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~------- 129 (298)
T COG2267 63 DVYALDLR-GHGRSPRGQR--GHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP------- 129 (298)
T ss_pred EEEEecCC-CCCCCCCCCc--CCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC-------
Confidence 88999999 999997 332 2233445556666666666544333 579999999999988777776543
Q ss_pred CcceeceeeEecCCccCch
Q 012276 200 KPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 200 ~~~inLkGi~igng~i~p~ 218 (467)
-.++|+++-+|++...
T Consensus 130 ---~~i~~~vLssP~~~l~ 145 (298)
T COG2267 130 ---PRIDGLVLSSPALGLG 145 (298)
T ss_pred ---ccccEEEEECccccCC
Confidence 2399999999998765
No 46
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.12 E-value=8.7e-05 Score=75.17 Aligned_cols=64 Identities=19% Similarity=0.225 Sum_probs=52.3
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEc-CCcccCCCCCcHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVK-GGGHTAPEYRPAECYAMF 458 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~-~AGHmvP~DqP~~a~~mi 458 (467)
.+++||..|..|.++|....++..+.+. ......+++.|. ++||+.+.++|+...+.|
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~---------------------~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L 367 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALL---------------------AAGADVSYAEIDSPYGHDAFLLDDPRYGRLV 367 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHH---------------------hcCCCeEEEEeCCCCCchhHhcCHHHHHHHH
Confidence 6899999999999999988776666642 011235778886 999999999999999999
Q ss_pred HHHHcC
Q 012276 459 QRWINH 464 (467)
Q Consensus 459 ~~fl~~ 464 (467)
.+||.+
T Consensus 368 ~~FL~~ 373 (379)
T PRK00175 368 RAFLER 373 (379)
T ss_pred HHHHHh
Confidence 999975
No 47
>PLN02511 hydrolase
Probab=98.04 E-value=0.00029 Score=71.60 Aligned_cols=116 Identities=18% Similarity=0.158 Sum_probs=71.4
Q ss_pred eeEEeCCCCCeeEEEEEeec--CCCCCCCCEEEEECCCCchHHH-h-HHHHhhcCeEEeccCCCCCCCccccCCCCcccc
Q 012276 44 GYVGVGESEEAQLFYYFVKS--DKNPKEDPLLLWLTGGPGCSAF-S-GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKE 119 (467)
Q Consensus 44 Gyl~v~~~~~~~lFy~f~es--~~~~~~~Pl~lWlnGGPG~SS~-~-g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~ 119 (467)
-++...+ +..+.+.++.. ...+.++|+||.++|..|+|.. + -.+.. .+ ..+-
T Consensus 74 e~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~----------------~~------~~~g 129 (388)
T PLN02511 74 ECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL----------------RA------RSKG 129 (388)
T ss_pred EEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH----------------HH------HHCC
Confidence 4555543 45566533321 2235678999999999998742 1 11110 00 0123
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHH
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQR 190 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~ 190 (467)
.+++-+|.| |.|-|.......+ ....++|+.+++...-.++| ..+++++|+|.||..+-.++.+
T Consensus 130 ~~vv~~d~r-G~G~s~~~~~~~~---~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 130 WRVVVFNSR-GCADSPVTTPQFY---SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred CEEEEEecC-CCCCCCCCCcCEE---cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh
Confidence 689999988 9998864322111 12345677777766655666 4589999999999887666543
No 48
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.94 E-value=2e-05 Score=77.83 Aligned_cols=132 Identities=26% Similarity=0.323 Sum_probs=82.7
Q ss_pred EEEEEeec--CCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccc
Q 012276 56 LFYYFVKS--DKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGF 133 (467)
Q Consensus 56 lFy~f~es--~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGf 133 (467)
-.||+.++ +.+|++||++|.++|| |.+.+.=|+.+.. -.+=|...+...+|.+|-..-.
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG-------GY~l~~~p~qi~~----------L~~i~~~l~~~SILvLDYsLt~-- 166 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG-------GYFLGTTPSQIEF----------LLNIYKLLPEVSILVLDYSLTS-- 166 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC-------eeEecCCHHHHHH----------HHHHHHHcCCCeEEEEeccccc--
Confidence 46999985 3468889999999999 4445444444321 1122222334489999944322
Q ss_pred cCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCC
Q 012276 134 SYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNP 213 (467)
Q Consensus 134 Sy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng 213 (467)
....+..+++-..|. .+..+...+.. ...++.|.|+|-||+.+-.+..++.+.+. .+--|++++.+|
T Consensus 167 -~~~~~~~yPtQL~ql----v~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~-----~~~Pk~~iLISP 233 (374)
T PF10340_consen 167 -SDEHGHKYPTQLRQL----VATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNK-----LPYPKSAILISP 233 (374)
T ss_pred -cccCCCcCchHHHHH----HHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCC-----CCCCceeEEECC
Confidence 001233344433333 33333333222 23579999999999999999999877543 123589999999
Q ss_pred ccCchh
Q 012276 214 RTDMVV 219 (467)
Q Consensus 214 ~i~p~~ 219 (467)
|+++..
T Consensus 234 Wv~l~~ 239 (374)
T PF10340_consen 234 WVNLVP 239 (374)
T ss_pred CcCCcC
Confidence 999963
No 49
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.79 E-value=9.8e-05 Score=69.37 Aligned_cols=100 Identities=25% Similarity=0.218 Sum_probs=69.6
Q ss_pred CCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhHh
Q 012276 70 DPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQ 149 (467)
Q Consensus 70 ~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~ 149 (467)
.|.||+++|.||++..+-.+.+. + +..+++.+|.| |.|.|.... ..+-++.
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~----------------l--------~~~~vi~~D~~-G~G~S~~~~----~~~~~~~ 52 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEA----------------L--------PDYPRLYIDLP-GHGGSAAIS----VDGFADV 52 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHH----------------c--------CCCCEEEecCC-CCCCCCCcc----ccCHHHH
Confidence 58899999999988877544411 1 13899999977 999996322 1244556
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCc
Q 012276 150 VHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (467)
Q Consensus 150 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~ 214 (467)
|+++.++|.. . .-.+++++|+|+||..+-.+|.+.... .++++++.++.
T Consensus 53 ~~~l~~~l~~----~---~~~~~~lvG~S~Gg~va~~~a~~~~~~---------~v~~lvl~~~~ 101 (242)
T PRK11126 53 SRLLSQTLQS----Y---NILPYWLVGYSLGGRIAMYYACQGLAG---------GLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHH----c---CCCCeEEEEECHHHHHHHHHHHhCCcc---------cccEEEEeCCC
Confidence 6666655543 2 345899999999998888888753221 17888887764
No 50
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.70 E-value=0.0017 Score=64.20 Aligned_cols=60 Identities=27% Similarity=0.406 Sum_probs=52.2
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
+.+|||..|+.|.++|....+...++ . .|..+..|.+|||.+..++|++....|.
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~------------------------~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~ 318 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKK------------------------L-PNAELVEIPGAGHLPHLERPEEVAALLR 318 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhh------------------------C-CCceEEEeCCCCcccccCCHHHHHHHHH
Confidence 48899999999999999955554444 2 5789999999999999999999999999
Q ss_pred HHHcC
Q 012276 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
.|+.+
T Consensus 319 ~Fi~~ 323 (326)
T KOG1454|consen 319 SFIAR 323 (326)
T ss_pred HHHHH
Confidence 99975
No 51
>PLN02872 triacylglycerol lipase
Probab=97.70 E-value=0.00058 Score=69.24 Aligned_cols=61 Identities=13% Similarity=0.146 Sum_probs=49.6
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCccc---CCCCCcHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHT---APEYRPAECYA 456 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHm---vP~DqP~~a~~ 456 (467)
+++|+|+.|..|.+++....+++.+.|. ..-.+..+.++||+ ...+.|+..++
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp------------------------~~~~l~~l~~~gH~dfi~~~eape~V~~ 380 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELP------------------------SKPELLYLENYGHIDFLLSTSAKEDVYN 380 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCC------------------------CccEEEEcCCCCCHHHHhCcchHHHHHH
Confidence 5899999999999999999999988873 01234667999996 45689999999
Q ss_pred HHHHHHcC
Q 012276 457 MFQRWINH 464 (467)
Q Consensus 457 mi~~fl~~ 464 (467)
-+.+||.+
T Consensus 381 ~Il~fL~~ 388 (395)
T PLN02872 381 HMIQFFRS 388 (395)
T ss_pred HHHHHHHH
Confidence 99889864
No 52
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.69 E-value=0.00026 Score=72.48 Aligned_cols=79 Identities=18% Similarity=0.111 Sum_probs=55.3
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCC
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 199 (467)
.++|-+|.| |+|.|..... ..+ ...+...+.+++...|.....++.|+|.|+||..++.+|..-.++
T Consensus 223 y~vl~~D~p-G~G~s~~~~~---~~d----~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~r----- 289 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWKL---TQD----SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPR----- 289 (414)
T ss_pred CEEEEECCC-CCCCCCCCCc---ccc----HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcC-----
Confidence 789999999 9999854211 111 122334455566666766667899999999999999988543222
Q ss_pred CcceeceeeEecCCccC
Q 012276 200 KPLINLQGYILGNPRTD 216 (467)
Q Consensus 200 ~~~inLkGi~igng~i~ 216 (467)
++++++.+|.++
T Consensus 290 -----i~a~V~~~~~~~ 301 (414)
T PRK05077 290 -----LKAVACLGPVVH 301 (414)
T ss_pred -----ceEEEEECCccc
Confidence 899999888765
No 53
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.61 E-value=0.00031 Score=67.23 Aligned_cols=125 Identities=13% Similarity=0.104 Sum_probs=78.0
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCc---hHH-HhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCC
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPG---CSA-FSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSP 128 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG---~SS-~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqP 128 (467)
..++|.|+++.... ..+|+||.++|-.+ ++. ++..+. . .|. ..-.+++-+|.|
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la---~-------------~La------~~Gy~Vl~~Dl~ 65 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQA---R-------------AFA------AGGFGVLQIDLY 65 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHH---H-------------HHH------HCCCEEEEECCC
Confidence 45688888876532 33799999998643 111 111111 0 011 122689999988
Q ss_pred ccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceee
Q 012276 129 VGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGY 208 (467)
Q Consensus 129 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi 208 (467)
|.|.|...... .+.+...+|+..++. |++... ..+++|+|+|.||..+..+|.+..+ .++++
T Consensus 66 -G~G~S~g~~~~---~~~~~~~~Dv~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~----------~v~~l 127 (266)
T TIGR03101 66 -GCGDSAGDFAA---ARWDVWKEDVAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAANPLAA----------KCNRL 127 (266)
T ss_pred -CCCCCCCcccc---CCHHHHHHHHHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHHHhCcc----------ccceE
Confidence 99998653221 233345566554433 444332 3589999999999998887754322 27899
Q ss_pred EecCCccCch
Q 012276 209 ILGNPRTDMV 218 (467)
Q Consensus 209 ~igng~i~p~ 218 (467)
++.+|+++..
T Consensus 128 VL~~P~~~g~ 137 (266)
T TIGR03101 128 VLWQPVVSGK 137 (266)
T ss_pred EEeccccchH
Confidence 9999998765
No 54
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.36 E-value=0.00079 Score=64.90 Aligned_cols=107 Identities=16% Similarity=0.154 Sum_probs=69.0
Q ss_pred CCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChh
Q 012276 68 KEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDF 147 (467)
Q Consensus 68 ~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~ 147 (467)
.++|.||+++|..+.++.+..+.+ .|.. .-.+++-+|.| |.|.|...... ..+.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~----------------~L~~------~g~~vi~~dl~-g~G~s~~~~~~--~~~~~ 70 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRC----------------LMEN------SGYKVTCIDLK-SAGIDQSDADS--VTTFD 70 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHH----------------HHHh------CCCEEEEeccc-CCCCCCCCccc--CCCHH
Confidence 567999999998887766543331 1111 12689999988 99987432211 23455
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
+.++++.++|+ .... ..+++|.|+||||..+-.++.+.-+ .++++++.++.+
T Consensus 71 ~~~~~l~~~i~----~l~~--~~~v~lvGhS~GG~v~~~~a~~~p~----------~v~~lv~~~~~~ 122 (273)
T PLN02211 71 EYNKPLIDFLS----SLPE--NEKVILVGHSAGGLSVTQAIHRFPK----------KICLAVYVAATM 122 (273)
T ss_pred HHHHHHHHHHH----hcCC--CCCEEEEEECchHHHHHHHHHhChh----------heeEEEEecccc
Confidence 55555555554 3321 3689999999999987777754322 278888877653
No 55
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.36 E-value=0.00065 Score=62.83 Aligned_cols=118 Identities=14% Similarity=0.087 Sum_probs=60.7
Q ss_pred CCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCC---CCCc
Q 012276 67 PKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTP---HASQ 143 (467)
Q Consensus 67 ~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~---~~~~ 143 (467)
.+..|+||+|+|+++.++....-. + +. .+. + ..-..||.+|.| |.|.+...-. ....
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~~~~~--~---~~---------~~a-~----~~g~~Vv~Pd~~-g~~~~~~~~~~~~~~~~ 69 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAYVIDW--G---WK---------AAA-D----RYGFVLVAPEQT-SYNSSNNCWDWFFTHHR 69 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHHhhhc--C---hH---------HHH-H----hCCeEEEecCCc-CccccCCCCCCCCcccc
Confidence 456899999999998766432000 0 00 000 0 012467777765 4432211000 0000
Q ss_pred cChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 144 TGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 144 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
........++.+++....+.++ ....+++|+|+|.||..+-.++.+-.+ .+.++++..|..
T Consensus 70 ~~~~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~p~----------~~~~~~~~~g~~ 130 (212)
T TIGR01840 70 ARGTGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTYPD----------VFAGGASNAGLP 130 (212)
T ss_pred CCCCccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhCch----------hheEEEeecCCc
Confidence 0001123334444444444442 344589999999999887666653211 277887777654
No 56
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.34 E-value=0.0025 Score=61.50 Aligned_cols=52 Identities=13% Similarity=0.096 Sum_probs=35.4
Q ss_pred HHHHHHHHh-CCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCc
Q 012276 155 QFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 155 ~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p 217 (467)
+.|..+++. ++ ....+++|+|.|+||..+-.++.+-.+ .+++++..+|+.++
T Consensus 123 ~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p~----------~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 123 QELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNPD----------RFKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCcc----------cceEEEEECCccCc
Confidence 333333433 33 445689999999999877777754322 27899999999775
No 57
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.31 E-value=0.0023 Score=60.88 Aligned_cols=128 Identities=20% Similarity=0.153 Sum_probs=87.9
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCcccc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtG 132 (467)
+..||.-.+....+++-+-+|+..+|.=+-||.. |.+.-. .|..+- .-+--+|++ |.|
T Consensus 37 G~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~--~~~~a~-------------~l~~~g------~~v~a~D~~-GhG 94 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWR--YQSTAK-------------RLAKSG------FAVYAIDYE-GHG 94 (313)
T ss_pred CCEeEEEecccCCCCCCceEEEEEcCCcccchhh--HHHHHH-------------HHHhCC------CeEEEeecc-CCC
Confidence 6789986665555557788999999876665421 111100 011111 346679988 999
Q ss_pred ccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecC
Q 012276 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (467)
Q Consensus 133 fSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ign 212 (467)
.|-+. ..+..+-+.+++|...|+..+- ...+++..|.|+.|||.||--+-.++.+ +.+ -..|+++..
T Consensus 95 ~SdGl--~~yi~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k--~p~--------~w~G~ilva 161 (313)
T KOG1455|consen 95 RSDGL--HAYVPSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK--DPN--------FWDGAILVA 161 (313)
T ss_pred cCCCC--cccCCcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh--CCc--------ccccceeee
Confidence 99754 3467788888899888887763 5668888999999999999777766654 221 278888888
Q ss_pred Ccc
Q 012276 213 PRT 215 (467)
Q Consensus 213 g~i 215 (467)
|+.
T Consensus 162 Pmc 164 (313)
T KOG1455|consen 162 PMC 164 (313)
T ss_pred ccc
Confidence 765
No 58
>PLN02442 S-formylglutathione hydrolase
Probab=97.21 E-value=0.0017 Score=62.96 Aligned_cols=57 Identities=12% Similarity=0.114 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 149 QVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 149 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
..+++...+..++.. +...+++|+|.|+||.-+-.+|.+-.+ .+++++..+|..++.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p~----------~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNPD----------KYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCch----------hEEEEEEECCccCcc
Confidence 344455556655543 334579999999999877666654222 178999999987753
No 59
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.20 E-value=0.0049 Score=58.47 Aligned_cols=146 Identities=16% Similarity=0.139 Sum_probs=83.9
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccc-----eeeecC
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEAS-----ILFVDS 127 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~an-----llfIDq 127 (467)
+...-||++.....++..||||-|+|+=|.....- +-..|++.|+ |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~------------------------~~sg~d~lAd~~gFlV~yPdg 99 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQL------------------------HGTGWDALADREGFLVAYPDG 99 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHhh------------------------cccchhhhhcccCcEEECcCc
Confidence 46677998887777888899999999988665421 2223444443 344331
Q ss_pred ------CccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCc
Q 012276 128 ------PVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKP 201 (467)
Q Consensus 128 ------PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~ 201 (467)
|-+.|=++...+. ....+|+ ..|.+.+.....+| ......+||+|-|=||..+-.++..--+.
T Consensus 100 ~~~~wn~~~~~~~~~p~~~--~~g~ddV-gflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~p~~------- 168 (312)
T COG3509 100 YDRAWNANGCGNWFGPADR--RRGVDDV-GFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEYPDI------- 168 (312)
T ss_pred cccccCCCcccccCCcccc--cCCccHH-HHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcCccc-------
Confidence 3344444332211 1122222 22333333333444 34455799999999999888877644332
Q ss_pred ceeceeeEecCCcc-Cch-hhccchhhhhhhcCCCCH
Q 012276 202 LINLQGYILGNPRT-DMV-VEQNSQIPFAHGMGLISN 236 (467)
Q Consensus 202 ~inLkGi~igng~i-~p~-~~~~~~~~~a~~~gli~~ 236 (467)
+.+|++..|.. +.. .....-.+.+..+|..|+
T Consensus 169 ---faa~A~VAg~~~~~~a~~~~rp~~~m~~~G~~Dp 202 (312)
T COG3509 169 ---FAAIAPVAGLLALGVACTPPRPVSVMAFHGTADP 202 (312)
T ss_pred ---ccceeeeecccCCCcccCCCCchhHHHhcCCCCC
Confidence 88888888877 332 122223445556666654
No 60
>PRK05855 short chain dehydrogenase; Validated
Probab=96.91 E-value=0.0052 Score=65.63 Aligned_cols=100 Identities=14% Similarity=0.134 Sum_probs=67.0
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCcccc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtG 132 (467)
+..+.|+-+. +.+.|.||.++|.++.+..+..+.+. | .+..+++-+|.| |.|
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~w~~~~~~----------------L-------~~~~~Vi~~D~~-G~G 63 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEVWDGVAPL----------------L-------ADRFRVVAYDVR-GAG 63 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHHHHHHHHH----------------h-------hcceEEEEecCC-CCC
Confidence 5678776432 23478999999999887766544321 1 123689999988 999
Q ss_pred ccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHH
Q 012276 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPAL 187 (467)
Q Consensus 133 fSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 187 (467)
.|...... ...+.++.++|+..++... .+ ..|++|+|+|+||..+-.+
T Consensus 64 ~S~~~~~~-~~~~~~~~a~dl~~~i~~l---~~---~~~~~lvGhS~Gg~~a~~~ 111 (582)
T PRK05855 64 RSSAPKRT-AAYTLARLADDFAAVIDAV---SP---DRPVHLLAHDWGSIQGWEA 111 (582)
T ss_pred CCCCCCcc-cccCHHHHHHHHHHHHHHh---CC---CCcEEEEecChHHHHHHHH
Confidence 99753321 1235667788888888752 11 3479999999999554333
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.87 E-value=0.0082 Score=55.35 Aligned_cols=105 Identities=21% Similarity=0.218 Sum_probs=66.5
Q ss_pred CCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhHh
Q 012276 70 DPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQ 149 (467)
Q Consensus 70 ~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~ 149 (467)
.|.+++++|+|+++..+....+.. ..... + .+++.+|+| |.|.|. .. .......
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~----------------~~~~~---~-~~~~~~d~~-g~g~s~-~~----~~~~~~~ 74 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVL----------------PALAA---R-YRVIAPDLR-GHGRSD-PA----GYSLSAY 74 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHh----------------hcccc---c-eEEEEeccc-CCCCCC-cc----cccHHHH
Confidence 669999999999998765411110 00111 1 899999999 999997 11 1111112
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCc
Q 012276 150 VHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 150 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p 217 (467)
++++..++. ... ..++.+.|+|+||..+-.++.+..+ .++++++.++...+
T Consensus 75 ~~~~~~~~~----~~~---~~~~~l~G~S~Gg~~~~~~~~~~p~----------~~~~~v~~~~~~~~ 125 (282)
T COG0596 75 ADDLAALLD----ALG---LEKVVLVGHSMGGAVALALALRHPD----------RVRGLVLIGPAPPP 125 (282)
T ss_pred HHHHHHHHH----HhC---CCceEEEEecccHHHHHHHHHhcch----------hhheeeEecCCCCc
Confidence 444444443 322 2349999999998777777765544 27888888877653
No 62
>PRK10566 esterase; Provisional
Probab=96.78 E-value=0.0082 Score=56.63 Aligned_cols=62 Identities=18% Similarity=0.216 Sum_probs=47.2
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
..++|+.+|..|.+++...+++..+.++= +| ...+++++++.|+||... | ..++-+.
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~---------------~g----~~~~~~~~~~~~~~H~~~---~-~~~~~~~ 242 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRE---------------RG----LDKNLTCLWEPGVRHRIT---P-EALDAGV 242 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHh---------------cC----CCcceEEEecCCCCCccC---H-HHHHHHH
Confidence 46899999999999999999988877631 11 113588999999999974 3 4566666
Q ss_pred HHHcC
Q 012276 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
+||.+
T Consensus 243 ~fl~~ 247 (249)
T PRK10566 243 AFFRQ 247 (249)
T ss_pred HHHHh
Confidence 78864
No 63
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=96.73 E-value=0.0024 Score=58.87 Aligned_cols=56 Identities=25% Similarity=0.296 Sum_probs=48.0
Q ss_pred cCCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHH
Q 012276 379 KGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMF 458 (467)
Q Consensus 379 ~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi 458 (467)
-.+++|+.+|..|.++|....+...+.+ .+-.++++.++||+...+.|+..-++|
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~-------------------------~~~~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLI-------------------------PNSQLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHS-------------------------TTEEEEEETTCCSTHHHHSHHHHHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhc-------------------------CCCEEEECCCCChHHHhcCHHhhhhhh
Confidence 4799999999999999999888855553 456778999999999999999988887
Q ss_pred H
Q 012276 459 Q 459 (467)
Q Consensus 459 ~ 459 (467)
.
T Consensus 229 ~ 229 (230)
T PF00561_consen 229 I 229 (230)
T ss_dssp H
T ss_pred c
Confidence 5
No 64
>PRK10985 putative hydrolase; Provisional
Probab=96.68 E-value=0.0091 Score=59.06 Aligned_cols=46 Identities=20% Similarity=0.153 Sum_probs=35.4
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCC
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYR 450 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~Dq 450 (467)
.+++|+.+|+.|.+++....+.. .++ . .+.+++.+.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~-~~~-----------------------~-~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKP-ESL-----------------------P-PNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHH-HHh-----------------------C-CCeEEEECCCCCceeeCCC
Confidence 68999999999999987655433 221 2 4678899999999988764
No 65
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=96.62 E-value=0.0098 Score=57.34 Aligned_cols=78 Identities=15% Similarity=0.138 Sum_probs=54.1
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCC
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 199 (467)
.+++-+|.| |.|-|.... .+.++..+|+..+++.+-+..|.+ .++.++|+|.||..+-.+|.. .
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~---~----- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA---D----- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh---C-----
Confidence 789999988 999886431 133355677777777655555543 369999999999765555421 1
Q ss_pred CcceeceeeEecCCccC
Q 012276 200 KPLINLQGYILGNPRTD 216 (467)
Q Consensus 200 ~~~inLkGi~igng~i~ 216 (467)
-.++|+++.||++.
T Consensus 122 ---~~v~~lil~~p~~~ 135 (274)
T TIGR03100 122 ---LRVAGLVLLNPWVR 135 (274)
T ss_pred ---CCccEEEEECCccC
Confidence 13899999999864
No 66
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.51 E-value=0.0019 Score=62.28 Aligned_cols=113 Identities=13% Similarity=0.096 Sum_probs=68.6
Q ss_pred CCCCEEEEECCCCchH-HHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccCh
Q 012276 68 KEDPLLLWLTGGPGCS-AFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGD 146 (467)
Q Consensus 68 ~~~Pl~lWlnGGPG~S-S~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~ 146 (467)
.++|++|+++|-.|.. ..+- ..+ .+.+.-....|++.||-+.+..-.|.. ...+.
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~--~~l------------------~~~ll~~~~~nVi~vD~~~~~~~~y~~----a~~~~ 89 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWI--SDL------------------RKAYLSRGDYNVIVVDWGRGANPNYPQ----AVNNT 89 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHH--HHH------------------HHHHHhcCCCEEEEEECccccccChHH----HHHhH
Confidence 4579999999987754 2211 000 000100134899999976431111110 01244
Q ss_pred hHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 147 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
+.+++++.++|+...+.. .....+++|+|+|.||+.+-.+|.+..+ .++.|+..+|..
T Consensus 90 ~~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----------~v~~iv~LDPa~ 147 (275)
T cd00707 90 RVVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----------KLGRITGLDPAG 147 (275)
T ss_pred HHHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC----------ccceeEEecCCc
Confidence 566777777777765543 2334579999999999999888876633 288999888763
No 67
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.20 E-value=0.011 Score=63.06 Aligned_cols=129 Identities=15% Similarity=0.121 Sum_probs=76.7
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcc-cccceeeecCCccc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWT-KEASILFVDSPVGT 131 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~-~~anllfIDqPvGt 131 (467)
+..|+..++.... .+..|+||.++|--..+.... +.... ...-|. +-..+|-+|.+ |.
T Consensus 6 G~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~-----~~~~~--------------~~~~l~~~Gy~vv~~D~R-G~ 64 (550)
T TIGR00976 6 GTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRW-----GLDKT--------------EPAWFVAQGYAVVIQDTR-GR 64 (550)
T ss_pred CCEEEEEEEecCC-CCCCCEEEEecCCCCchhhcc-----ccccc--------------cHHHHHhCCcEEEEEecc-cc
Confidence 5678876654432 346899999986543222100 00000 001111 24789999966 99
Q ss_pred cccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEec
Q 012276 132 GFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILG 211 (467)
Q Consensus 132 GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ig 211 (467)
|.|-+.... .+ .+.++|+.+++. |+.+.| +.+.++.++|.||||..+-.+|.. . .-.||+++..
T Consensus 65 g~S~g~~~~---~~-~~~~~D~~~~i~-~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~---~-------~~~l~aiv~~ 128 (550)
T TIGR00976 65 GASEGEFDL---LG-SDEAADGYDLVD-WIAKQP-WCDGNVGMLGVSYLAVTQLLAAVL---Q-------PPALRAIAPQ 128 (550)
T ss_pred ccCCCceEe---cC-cccchHHHHHHH-HHHhCC-CCCCcEEEEEeChHHHHHHHHhcc---C-------CCceeEEeec
Confidence 999764321 11 345666665555 555555 334589999999999765555532 1 1239999999
Q ss_pred CCccCch
Q 012276 212 NPRTDMV 218 (467)
Q Consensus 212 ng~i~p~ 218 (467)
+++.|..
T Consensus 129 ~~~~d~~ 135 (550)
T TIGR00976 129 EGVWDLY 135 (550)
T ss_pred Ccccchh
Confidence 9987754
No 68
>PRK10115 protease 2; Provisional
Probab=96.04 E-value=0.024 Score=61.85 Aligned_cols=127 Identities=16% Similarity=0.060 Sum_probs=69.9
Q ss_pred CeeEEEEEee-cC-CCCCCCCEEEEECCCCchHHH------hHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceee
Q 012276 53 EAQLFYYFVK-SD-KNPKEDPLLLWLTGGPGCSAF------SGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILF 124 (467)
Q Consensus 53 ~~~lFy~f~e-s~-~~~~~~Pl~lWlnGGPG~SS~------~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllf 124 (467)
|..+-.|++- .. ......|++|+.+||||.|.. ...|.+-|=..+-.
T Consensus 426 G~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~------------------------- 480 (686)
T PRK10115 426 GVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIV------------------------- 480 (686)
T ss_pred CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEE-------------------------
Confidence 5666665543 21 123456999999999998843 23344333333222
Q ss_pred ecCCc-cccccCccCCC-CCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcc
Q 012276 125 VDSPV-GTGFSYARTPH-ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPL 202 (467)
Q Consensus 125 IDqPv-GtGfSy~~~~~-~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~ 202 (467)
. +- |+||-..=... ...+. ...-+|+........+ ..--....+.|.|-||||..+-.++.+--+
T Consensus 481 -n-~RGs~g~G~~w~~~g~~~~k-~~~~~D~~a~~~~Lv~-~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd--------- 547 (686)
T PRK10115 481 -H-VRGGGELGQQWYEDGKFLKK-KNTFNDYLDACDALLK-LGYGSPSLCYGMGGSAGGMLMGVAINQRPE--------- 547 (686)
T ss_pred -E-cCCCCccCHHHHHhhhhhcC-CCcHHHHHHHHHHHHH-cCCCChHHeEEEEECHHHHHHHHHHhcChh---------
Confidence 2 33 33333211000 00111 1234566666654433 322234579999999999865544432212
Q ss_pred eeceeeEecCCccCch
Q 012276 203 INLQGYILGNPRTDMV 218 (467)
Q Consensus 203 inLkGi~igng~i~p~ 218 (467)
-+++++.+.|++|..
T Consensus 548 -lf~A~v~~vp~~D~~ 562 (686)
T PRK10115 548 -LFHGVIAQVPFVDVV 562 (686)
T ss_pred -heeEEEecCCchhHh
Confidence 299999999999875
No 69
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.01 E-value=0.056 Score=53.33 Aligned_cols=136 Identities=18% Similarity=0.219 Sum_probs=83.2
Q ss_pred CeeEEEEEeecCCC-C-CCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcc-cccceeeecCCc
Q 012276 53 EAQLFYYFVKSDKN-P-KEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWT-KEASILFVDSPV 129 (467)
Q Consensus 53 ~~~lFy~f~es~~~-~-~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~-~~anllfIDqPv 129 (467)
...++.+.|..... + ..+|++|+++||=-|-+.. . .....+--++. +.+|.+-|
T Consensus 71 ~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~--------------~-----~~~y~~~~~~~a~~~~~vvv---- 127 (336)
T KOG1515|consen 71 FTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA--------------N-----SPAYDSFCTRLAAELNCVVV---- 127 (336)
T ss_pred CCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC--------------C-----CchhHHHHHHHHHHcCeEEE----
Confidence 56799998876543 3 5899999999996554310 0 00111111222 33444433
Q ss_pred cccccCccCCCCCccChhHhHHHHHHHHHH-HHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceee
Q 012276 130 GTGFSYARTPHASQTGDFKQVHHLDQFLRK-WLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGY 208 (467)
Q Consensus 130 GtGfSy~~~~~~~~~~~~~~a~d~~~fL~~-f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi 208 (467)
.++|=.+. +..++..-++.-+.+.-++++ |....-..+ .++|+|.|-||-.+-.+|.++.+.. ...+.|+|+
T Consensus 128 SVdYRLAP-Eh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~ 200 (336)
T KOG1515|consen 128 SVDYRLAP-EHPFPAAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQ 200 (336)
T ss_pred ecCcccCC-CCCCCccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----CCCcceEEE
Confidence 34444332 234444333333334444554 766554443 3999999999999999999998753 125679999
Q ss_pred EecCCccCch
Q 012276 209 ILGNPRTDMV 218 (467)
Q Consensus 209 ~igng~i~p~ 218 (467)
++.-|+....
T Consensus 201 ili~P~~~~~ 210 (336)
T KOG1515|consen 201 ILIYPFFQGT 210 (336)
T ss_pred EEEecccCCC
Confidence 9999988764
No 70
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.91 E-value=0.02 Score=58.48 Aligned_cols=80 Identities=10% Similarity=-0.013 Sum_probs=53.6
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCC
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 199 (467)
.|+|-||-| |-|-|.-... ..+...+|+++.++|+...+.. .+.-.+++|+|+|.||+-+-.++.+...
T Consensus 74 ~nVI~VDw~-g~g~s~y~~a---~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p~------ 142 (442)
T TIGR03230 74 ANVIVVDWL-SRAQQHYPTS---AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTKH------ 142 (442)
T ss_pred CEEEEEECC-CcCCCCCccc---cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCCc------
Confidence 799999987 5553321111 1334577888888887554333 2444589999999999988887754321
Q ss_pred CcceeceeeEecCCc
Q 012276 200 KPLINLQGYILGNPR 214 (467)
Q Consensus 200 ~~~inLkGi~igng~ 214 (467)
.+.+|++.||.
T Consensus 143 ----rV~rItgLDPA 153 (442)
T TIGR03230 143 ----KVNRITGLDPA 153 (442)
T ss_pred ----ceeEEEEEcCC
Confidence 27888888874
No 71
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.77 E-value=0.0055 Score=61.52 Aligned_cols=81 Identities=21% Similarity=0.178 Sum_probs=55.1
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCC
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 199 (467)
-++|=||=| |||+|.... +. .| .+.++..+.+|+...|+.-...+.++|-|.||.|++.+|.-=.++
T Consensus 219 iA~LtvDmP-G~G~s~~~~---l~-~D---~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R----- 285 (411)
T PF06500_consen 219 IAMLTVDMP-GQGESPKWP---LT-QD---SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR----- 285 (411)
T ss_dssp -EEEEE--T-TSGGGTTT----S--S----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-----
T ss_pred CEEEEEccC-CCcccccCC---CC-cC---HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc-----
Confidence 578999999 999985321 11 11 234677888888889998888899999999999999999533233
Q ss_pred CcceeceeeEecCCccCch
Q 012276 200 KPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 200 ~~~inLkGi~igng~i~p~ 218 (467)
|||++...|.++..
T Consensus 286 -----lkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 286 -----LKAVVALGAPVHHF 299 (411)
T ss_dssp ------SEEEEES---SCG
T ss_pred -----eeeEeeeCchHhhh
Confidence 89988877776554
No 72
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.47 E-value=0.007 Score=55.78 Aligned_cols=89 Identities=10% Similarity=0.100 Sum_probs=58.7
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCC
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 199 (467)
..|+.+|..-+.||+..-........-....+|+.++++...+.. ..-...+.|+|.||||+.+-.++.+-.+
T Consensus 15 y~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~~~------ 87 (213)
T PF00326_consen 15 YAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQHPD------ 87 (213)
T ss_dssp -EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHTCC------
T ss_pred EEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcccce------
Confidence 678999988777777642221112223355677777777665444 4445679999999999998887763211
Q ss_pred CcceeceeeEecCCccCchh
Q 012276 200 KPLINLQGYILGNPRTDMVV 219 (467)
Q Consensus 200 ~~~inLkGi~igng~i~p~~ 219 (467)
.++.++.++|++|+..
T Consensus 88 ----~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 88 ----RFKAAVAGAGVSDLFS 103 (213)
T ss_dssp ----GSSEEEEESE-SSTTC
T ss_pred ----eeeeeeccceecchhc
Confidence 2799999999998753
No 73
>PLN00021 chlorophyllase
Probab=95.41 E-value=0.13 Score=50.44 Aligned_cols=116 Identities=17% Similarity=0.124 Sum_probs=66.2
Q ss_pred CCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccCh
Q 012276 67 PKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGD 146 (467)
Q Consensus 67 ~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~ 146 (467)
..+.|+|++++|+.+.+..+..+.+. +. +| -..++.+|-+ | ++.... ..+
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~~----------------La----s~--G~~VvapD~~-g--~~~~~~-----~~~ 98 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQH----------------IA----SH--GFIVVAPQLY-T--LAGPDG-----TDE 98 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHHH----------------HH----hC--CCEEEEecCC-C--cCCCCc-----hhh
Confidence 35689999999998766544322211 00 01 1345556644 2 221110 112
Q ss_pred hHhHHHHHHHHHHHHHh-CC---CCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCc
Q 012276 147 FKQVHHLDQFLRKWLMD-HP---EFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 147 ~~~a~d~~~fL~~f~~~-fp---~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p 217 (467)
.+.+.++..++.+-++. .| +....+++|+|+|.||..+-.+|.+..+.. ....+++++..+|+...
T Consensus 99 i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 99 IKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeecccccc
Confidence 23355566666654432 12 223357999999999998888886554321 12458999998987644
No 74
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=95.39 E-value=0.098 Score=49.37 Aligned_cols=108 Identities=20% Similarity=0.284 Sum_probs=72.0
Q ss_pred CCCCCEEEEECCCCchHHH-hHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccC
Q 012276 67 PKEDPLLLWLTGGPGCSAF-SGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTG 145 (467)
Q Consensus 67 ~~~~Pl~lWlnGGPG~SS~-~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~ 145 (467)
...-|+++.++|| |.|.+ ++.|. .++..+- ..-++-+| --|.|-|..++..+ -+
T Consensus 71 ~t~gpil~l~HG~-G~S~LSfA~~a----------------~el~s~~-----~~r~~a~D-lRgHGeTk~~~e~d--lS 125 (343)
T KOG2564|consen 71 ATEGPILLLLHGG-GSSALSFAIFA----------------SELKSKI-----RCRCLALD-LRGHGETKVENEDD--LS 125 (343)
T ss_pred CCCccEEEEeecC-cccchhHHHHH----------------HHHHhhc-----ceeEEEee-ccccCccccCChhh--cC
Confidence 3456999999998 87765 34443 0111111 11237788 55999888766553 56
Q ss_pred hhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecC
Q 012276 146 DFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (467)
Q Consensus 146 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ign 212 (467)
.+..++|+...++.+|..-| . +++|.|+|.||-.+.+.|..= ..-+|.|+.+.+
T Consensus 126 ~eT~~KD~~~~i~~~fge~~---~-~iilVGHSmGGaIav~~a~~k---------~lpsl~Gl~viD 179 (343)
T KOG2564|consen 126 LETMSKDFGAVIKELFGELP---P-QIILVGHSMGGAIAVHTAASK---------TLPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHHHHHHhccCC---C-ceEEEeccccchhhhhhhhhh---------hchhhhceEEEE
Confidence 77889999999988774333 2 699999999998876655321 122388888876
No 75
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.34 E-value=0.053 Score=50.33 Aligned_cols=102 Identities=15% Similarity=0.240 Sum_probs=70.7
Q ss_pred EEEEECCCCchHHHhHHHHh-hcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhHhH
Q 012276 72 LLLWLTGGPGCSAFSGLAYE-IGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQV 150 (467)
Q Consensus 72 l~lWlnGGPG~SS~~g~~~E-~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a 150 (467)
.|+++.+|=|+++.+--|.. +++ + ..++..|+.| |-+ .......+-++.|
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~-----------------~------~~~v~~i~~~-~~~-----~~~~~~~si~~la 52 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPD-----------------D------VIGVYGIEYP-GRG-----DDEPPPDSIEELA 52 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTT-----------------T------EEEEEEECST-TSC-----TTSHEESSHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCC-----------------C------eEEEEEEecC-CCC-----CCCCCCCCHHHHH
Confidence 57888888787766533331 111 1 3678888866 665 1112246777888
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 151 HHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 151 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
+...+.|+. ..|+ -|++|+|.|+||..+=.+|.++.++ ......|++.++..
T Consensus 53 ~~y~~~I~~---~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~-------G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 53 SRYAEAIRA---RQPE---GPYVLAGWSFGGILAFEMARQLEEA-------GEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHH---HTSS---SSEEEEEETHHHHHHHHHHHHHHHT-------T-SESEEEEESCSS
T ss_pred HHHHHHhhh---hCCC---CCeeehccCccHHHHHHHHHHHHHh-------hhccCceEEecCCC
Confidence 887777764 4553 3999999999999999999999776 34588999999653
No 76
>PRK10162 acetyl esterase; Provisional
Probab=95.25 E-value=0.056 Score=53.33 Aligned_cols=60 Identities=12% Similarity=0.052 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCc
Q 012276 153 LDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 153 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p 217 (467)
.++++.+.-..+. ....+++|+|+|.||..+-.++.++.+... ....++|+++..|+++.
T Consensus 138 a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 138 VCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 4455554433331 234579999999999999999987765421 12347899999988764
No 77
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=95.14 E-value=0.047 Score=49.48 Aligned_cols=123 Identities=20% Similarity=0.273 Sum_probs=81.7
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCcccc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtG 132 (467)
.-.|.=|...+++ ++|.+|.|+|--|- .|++. ... .-.==+-..||+-||-- |-|
T Consensus 64 ~vtL~a~~~~~E~---S~pTlLyfh~NAGN---mGhr~------~i~------------~~fy~~l~mnv~ivsYR-GYG 118 (300)
T KOG4391|consen 64 KVTLDAYLMLSES---SRPTLLYFHANAGN---MGHRL------PIA------------RVFYVNLKMNVLIVSYR-GYG 118 (300)
T ss_pred ceeEeeeeecccC---CCceEEEEccCCCc---ccchh------hHH------------HHHHHHcCceEEEEEee-ccc
Confidence 3456555544333 78999999987662 22222 110 00001234789999955 999
Q ss_pred ccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecC
Q 012276 133 FSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN 212 (467)
Q Consensus 133 fSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ign 212 (467)
-|.+.....-...|.++| .+++...|...+.++++.|.|-||.-+-.+|++-.++ +.++++-|
T Consensus 119 ~S~GspsE~GL~lDs~av-------ldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r----------i~~~ivEN 181 (300)
T KOG4391|consen 119 KSEGSPSEEGLKLDSEAV-------LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR----------ISAIIVEN 181 (300)
T ss_pred cCCCCccccceeccHHHH-------HHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh----------eeeeeeec
Confidence 998765432223443332 3344678888888999999999999988888766554 89999999
Q ss_pred CccCc
Q 012276 213 PRTDM 217 (467)
Q Consensus 213 g~i~p 217 (467)
-+++-
T Consensus 182 TF~SI 186 (300)
T KOG4391|consen 182 TFLSI 186 (300)
T ss_pred hhccc
Confidence 98874
No 78
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=95.12 E-value=0.035 Score=47.18 Aligned_cols=94 Identities=20% Similarity=0.224 Sum_probs=60.2
Q ss_pred EEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhHhHH
Q 012276 72 LLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVH 151 (467)
Q Consensus 72 l~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~ 151 (467)
+||+++|+-|.+..+..+.+ .+.. . -.+++.+|.| |.|-|.. ...++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~----~l~~------------~------G~~v~~~~~~-~~~~~~~----------~~~~~ 47 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAE----ALAE------------Q------GYAVVAFDYP-GHGDSDG----------ADAVE 47 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHH----HHHH------------T------TEEEEEESCT-TSTTSHH----------SHHHH
T ss_pred CEEEECCCCCCHHHHHHHHH----HHHH------------C------CCEEEEEecC-CCCccch----------hHHHH
Confidence 68999999887766544443 1111 1 1678888877 7776521 12333
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCc
Q 012276 152 HLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (467)
Q Consensus 152 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~ 214 (467)
++.+.+. ...+ ..++++++|.|.||..+..++.+- . .++++++.+|+
T Consensus 48 ~~~~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~-~----------~v~~~v~~~~~ 94 (145)
T PF12695_consen 48 RVLADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN-P----------RVKAVVLLSPY 94 (145)
T ss_dssp HHHHHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS-T----------TESEEEEESES
T ss_pred HHHHHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc-c----------ceeEEEEecCc
Confidence 3444332 2333 356899999999999888887633 2 28999999985
No 79
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=94.89 E-value=0.13 Score=47.75 Aligned_cols=40 Identities=15% Similarity=0.142 Sum_probs=31.8
Q ss_pred CCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 166 EFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 166 ~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
..-.+.+|++|.|=||...-.++..--+. +.++++.+|..
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd~----------faa~a~~sG~~ 132 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPDL----------FAAVAVVSGVP 132 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCcc----------ceEEEeecccc
Confidence 45567899999999999888888655443 88888888764
No 80
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=94.75 E-value=0.21 Score=49.92 Aligned_cols=63 Identities=19% Similarity=0.215 Sum_probs=50.8
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEc-CCcccCCCCCcHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVK-GGGHTAPEYRPAECYAMF 458 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~-~AGHmvP~DqP~~a~~mi 458 (467)
.++||+..|..|.++|....+...+.+. ...-..+|+.|. +|||+++.++|+...+.|
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~---------------------~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l 346 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALP---------------------AAGLRVTYVEIESPYGHDAFLVETDQVEELI 346 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHh---------------------hcCCceEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 6899999999999999998887776652 011124566675 899999999999999999
Q ss_pred HHHHc
Q 012276 459 QRWIN 463 (467)
Q Consensus 459 ~~fl~ 463 (467)
.+||+
T Consensus 347 ~~FL~ 351 (351)
T TIGR01392 347 RGFLR 351 (351)
T ss_pred HHHhC
Confidence 99984
No 81
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=94.57 E-value=0.22 Score=47.76 Aligned_cols=118 Identities=17% Similarity=0.228 Sum_probs=77.1
Q ss_pred CCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCC-----CCCcc
Q 012276 70 DPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTP-----HASQT 144 (467)
Q Consensus 70 ~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~-----~~~~~ 144 (467)
+++++|+-|=||.-..+--|.+ .|..+- +....++=|. =.|+|..... +.-..
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~----------------~L~~~l---~~~~~i~~is---h~Gh~~~~~~~~~~~~~~~~ 59 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLS----------------ALYEKL---NPQFEILGIS---HAGHSTSPSNSKFSPNGRLF 59 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHH----------------HHHHhC---CCCCeeEEec---CCCCcCCcccccccCCCCcc
Confidence 5899999999999998765552 122221 3445555555 2355544332 22246
Q ss_pred ChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCc
Q 012276 145 GDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 145 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p 217 (467)
+.++..+.-.+||+++....+ ..+.+++|.|+|=|+..+-.+.+++. ....+++++++.=|.+.-
T Consensus 60 sL~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~-------~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 60 SLQDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLP-------DLKFRVKKVILLFPTIED 124 (266)
T ss_pred CHHHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhcc-------ccCCceeEEEEeCCcccc
Confidence 778888889999999887654 23568999999998766555555554 123557777777776654
No 82
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=94.52 E-value=0.087 Score=53.45 Aligned_cols=65 Identities=14% Similarity=0.137 Sum_probs=53.6
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcC-CcccCCCCCcHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKG-GGHTAPEYRPAECYAMF 458 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~-AGHmvP~DqP~~a~~mi 458 (467)
..+|||..|+.|.++|....++..+.+. ..+.+.++.+|.+ +||+.+.++|+...+.|
T Consensus 323 ~~PtLvI~G~~D~l~p~~~~~~la~~lp---------------------~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I 381 (389)
T PRK06765 323 EANVLMIPCKQDLLQPPRYNYKMVDILQ---------------------KQGKYAEVYEIESINGHMAGVFDIHLFEKKI 381 (389)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhh---------------------hcCCCeEEEEECCCCCcchhhcCHHHHHHHH
Confidence 6899999999999999887776666542 0113578899985 99999999999999999
Q ss_pred HHHHcCC
Q 012276 459 QRWINHD 465 (467)
Q Consensus 459 ~~fl~~~ 465 (467)
.+||..+
T Consensus 382 ~~FL~~~ 388 (389)
T PRK06765 382 YEFLNRK 388 (389)
T ss_pred HHHHccc
Confidence 9999753
No 83
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.48 E-value=0.097 Score=57.64 Aligned_cols=144 Identities=20% Similarity=0.177 Sum_probs=80.4
Q ss_pred eeeeEEeCCCCCeeEEEEEeecCC--CCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCccc-
Q 012276 42 ETGYVGVGESEEAQLFYYFVKSDK--NPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTK- 118 (467)
Q Consensus 42 ~sGyl~v~~~~~~~lFy~f~es~~--~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~- 118 (467)
..+-+.++ +-..++++....+ +.+.-||+++..||||+-+..+. ..+..|.+.+..
T Consensus 499 ~~~~i~~~---~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~------------------~~~~~~~~~~s~~ 557 (755)
T KOG2100|consen 499 EFGKIEID---GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSK------------------FSVDWNEVVVSSR 557 (755)
T ss_pred eeEEEEec---cEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeee------------------EEecHHHHhhccC
Confidence 44445542 4566777665432 23467999999999993332110 112223332222
Q ss_pred ccceeeecCCccccccCccCCCCCcc--ChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccc
Q 012276 119 EASILFVDSPVGTGFSYARTPHASQT--GDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENE 196 (467)
Q Consensus 119 ~anllfIDqPvGtGfSy~~~~~~~~~--~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~ 196 (467)
-+=++-|| +-|+|+.-..-...... .+.+ .+|.....+.+.+.+ ..-...+.|+|-||||...- +++....
T Consensus 558 g~~v~~vd-~RGs~~~G~~~~~~~~~~lG~~e-v~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~t~----~~l~~~~ 630 (755)
T KOG2100|consen 558 GFAVLQVD-GRGSGGYGWDFRSALPRNLGDVE-VKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYLTL----KLLESDP 630 (755)
T ss_pred CeEEEEEc-CCCcCCcchhHHHHhhhhcCCcc-hHHHHHHHHHHHhcc-cccHHHeEEeccChHHHHHH----HHhhhCc
Confidence 24567888 78888754321111111 2222 355566666666554 33344699999999996543 3333321
Q ss_pred cCCCcceeceeeEecCCccCch
Q 012276 197 EDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 197 ~~~~~~inLkGi~igng~i~p~ 218 (467)
.--+|.-+..+|++|..
T Consensus 631 -----~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 631 -----GDVFKCGVAVAPVTDWL 647 (755)
T ss_pred -----CceEEEEEEecceeeee
Confidence 12266668889999876
No 84
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=94.47 E-value=0.053 Score=54.22 Aligned_cols=127 Identities=13% Similarity=0.074 Sum_probs=72.1
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhH--------HHHhh-cCeEEeccCCCCCCCccccCCCCccccccee
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSG--------LAYEI-GPVNFNTVEYNGSLPTLRLNPYSWTKEASIL 123 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g--------~~~E~-GP~~~~~~~~~~~~~~l~~N~~sW~~~anll 123 (467)
+..++|.-+... +....|.||.++|=+|.+-... .+... ||- ..--.+...||
T Consensus 15 ~~~~~y~~~g~~-~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~-----------------~~l~~~~~~vi 76 (351)
T TIGR01392 15 DVRVAYETYGTL-NAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPG-----------------RAIDTDRYFVV 76 (351)
T ss_pred CceEEEEecccc-CCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCC-----------------CCcCCCceEEE
Confidence 567888755321 1234588999999888654310 11100 100 00002347899
Q ss_pred eecCCcc--ccccCccCC--CC--C-----ccChhHhHHHHHHHHHHHHHhCCCCCCCC-eEEEecccCCccHHHHHHHH
Q 012276 124 FVDSPVG--TGFSYARTP--HA--S-----QTGDFKQVHHLDQFLRKWLMDHPEFISNP-FYVGGDSYSGITVPALVQRI 191 (467)
Q Consensus 124 fIDqPvG--tGfSy~~~~--~~--~-----~~~~~~~a~d~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvP~la~~i 191 (467)
-+|.| | .|-|-..+. .. + ..+.++.++++..++. .. .+ .+ ++|+|+|+||..+-.+|.+-
T Consensus 77 ~~D~~-G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l-~~--~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 77 CSNVL-GGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLD----HL-GI--EQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred EecCC-CCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHH----Hc-CC--CCceEEEEECHHHHHHHHHHHHC
Confidence 99988 7 554432110 00 1 1234455555555554 32 22 34 99999999998888888654
Q ss_pred HhccccCCCcceeceeeEecCCcc
Q 012276 192 SNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 192 ~~~~~~~~~~~inLkGi~igng~i 215 (467)
-++ ++++++.++..
T Consensus 149 p~~----------v~~lvl~~~~~ 162 (351)
T TIGR01392 149 PER----------VRAIVVLATSA 162 (351)
T ss_pred hHh----------hheEEEEccCC
Confidence 332 89999988754
No 85
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=94.23 E-value=0.19 Score=40.67 Aligned_cols=60 Identities=22% Similarity=0.292 Sum_probs=49.0
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
..+||+.+|..|-++|+.+.++..+.|. +-..+++.++||-+-...-.-+.+++.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~-------------------------~s~lvt~~g~gHg~~~~~s~C~~~~v~ 88 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP-------------------------GSRLVTVDGAGHGVYAGGSPCVDKAVD 88 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC-------------------------CceEEEEeccCcceecCCChHHHHHHH
Confidence 4899999999999999999999998862 245699999999998544455677777
Q ss_pred HHHcC
Q 012276 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
+||..
T Consensus 89 ~yl~~ 93 (103)
T PF08386_consen 89 DYLLD 93 (103)
T ss_pred HHHHc
Confidence 77764
No 86
>PRK11460 putative hydrolase; Provisional
Probab=94.16 E-value=0.25 Score=46.24 Aligned_cols=53 Identities=15% Similarity=0.018 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 152 HLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 152 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
.+.++++...++. ....++++|.|.|.||..+-.++.+-.+ .+.+++..+|.+
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~~~~----------~~~~vv~~sg~~ 138 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKAEPG----------LAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHhCCC----------cceEEEEecccc
Confidence 3444444443332 3445679999999999998776643211 155666666654
No 87
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=93.77 E-value=0.087 Score=49.13 Aligned_cols=54 Identities=15% Similarity=0.217 Sum_probs=42.9
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
.++|+|..|+.|..+.. ...+ .+.+++.|.++||+++.++|+...+.|.
T Consensus 188 ~~P~lii~G~~D~~~~~-----~~~~--------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 236 (242)
T PRK11126 188 TFPFYYLCGERDSKFQA-----LAQQ--------------------------LALPLHVIPNAGHNAHRENPAAFAASLA 236 (242)
T ss_pred CCCeEEEEeCCcchHHH-----HHHH--------------------------hcCeEEEeCCCCCchhhhChHHHHHHHH
Confidence 68999999999975421 0000 1467789999999999999999999999
Q ss_pred HHHcC
Q 012276 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
.|+..
T Consensus 237 ~fl~~ 241 (242)
T PRK11126 237 QILRL 241 (242)
T ss_pred HHHhh
Confidence 99953
No 88
>PRK11071 esterase YqiA; Provisional
Probab=93.77 E-value=0.28 Score=44.42 Aligned_cols=54 Identities=9% Similarity=0.150 Sum_probs=42.9
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
..+|+|.+|..|-++|+..+.+..++ .....+.||+|-- ...+..++.+.
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~----------------------------~~~~~~~ggdH~f--~~~~~~~~~i~ 185 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAA----------------------------CRQTVEEGGNHAF--VGFERYFNQIV 185 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHh----------------------------cceEEECCCCcch--hhHHHhHHHHH
Confidence 46899999999999999987766553 2235779999998 44488999999
Q ss_pred HHHc
Q 012276 460 RWIN 463 (467)
Q Consensus 460 ~fl~ 463 (467)
.|+.
T Consensus 186 ~fl~ 189 (190)
T PRK11071 186 DFLG 189 (190)
T ss_pred HHhc
Confidence 9974
No 89
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.91 E-value=0.26 Score=51.75 Aligned_cols=55 Identities=11% Similarity=0.021 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccC
Q 012276 153 LDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (467)
Q Consensus 153 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~ 216 (467)
.++|+++-...|. -..+++.|+|+|.||+-+-.++..-... --++++++.+|...
T Consensus 160 al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~~~~~~--------~lf~~~i~~sg~~~ 214 (493)
T cd00312 160 ALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLLSPDSK--------GLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhhCcchh--------HHHHHHhhhcCCcc
Confidence 5678887777774 2345899999999997655444321110 11666776666544
No 90
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=92.86 E-value=1.3 Score=44.55 Aligned_cols=108 Identities=22% Similarity=0.267 Sum_probs=69.4
Q ss_pred CCCCCEEEEECCCCchHHH------hHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCC
Q 012276 67 PKEDPLLLWLTGGPGCSAF------SGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPH 140 (467)
Q Consensus 67 ~~~~Pl~lWlnGGPG~SS~------~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~ 140 (467)
..++|+++.+.|=.|.|.- .....+.| +++- -.- +-|.|-|-.+++.
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~V-------------------------VfN-~RG~~g~~LtTpr 174 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRVV-------------------------VFN-HRGLGGSKLTTPR 174 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEEE-------------------------EEC-CCCCCCCccCCCc
Confidence 4678999999999999853 33445555 3321 112 5688888776655
Q ss_pred CCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCc
Q 012276 141 ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (467)
Q Consensus 141 ~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~ 214 (467)
-+..... +|+-++++.--++|| ..++|.+|.|+||.. +.+++-+..+ +.++ ..|++|-|||
T Consensus 175 ~f~ag~t---~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~i---L~nYLGE~g~---~~~l-~~a~~v~~Pw 235 (409)
T KOG1838|consen 175 LFTAGWT---EDLREVVNHIKKRYP---QAPLFAVGFSMGGNI---LTNYLGEEGD---NTPL-IAAVAVCNPW 235 (409)
T ss_pred eeecCCH---HHHHHHHHHHHHhCC---CCceEEEEecchHHH---HHHHhhhccC---CCCc-eeEEEEeccc
Confidence 4443322 234444444446888 569999999999975 4555544432 2222 7899999998
No 91
>PLN02454 triacylglycerol lipase
Probab=91.35 E-value=0.52 Score=47.59 Aligned_cols=69 Identities=12% Similarity=0.115 Sum_probs=52.5
Q ss_pred hhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCc
Q 012276 146 DFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 146 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p 217 (467)
...+.+++...|+...+++|..+- .++|+|||.||-.+-..|..|...... ...+++..+..|.|-+..
T Consensus 205 ~~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 205 KLSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 346778899999999998987642 699999999999999988888765211 123457778888887754
No 92
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=90.63 E-value=0.48 Score=43.72 Aligned_cols=57 Identities=16% Similarity=0.179 Sum_probs=35.8
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccC
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~ 216 (467)
++++.+.++|....+.. ...++++|.|-|=||..+-.++.+..+ .+.|++..+|++-
T Consensus 85 ~s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~p~----------~~~gvv~lsG~~~ 141 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRYPE----------PLAGVVALSGYLP 141 (216)
T ss_dssp HHHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCTSS----------TSSEEEEES---T
T ss_pred HHHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHcCc----------CcCEEEEeecccc
Confidence 34444555555544332 456689999999999888777753322 3899999999874
No 93
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.15 E-value=24 Score=36.88 Aligned_cols=80 Identities=21% Similarity=0.368 Sum_probs=56.3
Q ss_pred HHHHhhhcCCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccC--CCC
Q 012276 372 YHVSLSTKGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTA--PEY 449 (467)
Q Consensus 372 ~~~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmv--P~D 449 (467)
.+.....+|=|+|+|||..|.+++..++..+-+++.=. ..|-...-.+-+-|..|.|.||-- |-.
T Consensus 345 DLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~-------------~g~~~~~v~dF~RlF~vPGm~HC~gG~g~ 411 (474)
T PF07519_consen 345 DLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVAR-------------MGGALADVDDFYRLFMVPGMGHCGGGPGP 411 (474)
T ss_pred CHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHh-------------cccccccccceeEEEecCCCcccCCCCCC
Confidence 34455567999999999999999999999988876310 111000011235678999999986 434
Q ss_pred CcHHHHHHHHHHHcC
Q 012276 450 RPAECYAMFQRWINH 464 (467)
Q Consensus 450 qP~~a~~mi~~fl~~ 464 (467)
.|-.++.-|.+|+.+
T Consensus 412 ~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 412 DPFDALTALVDWVEN 426 (474)
T ss_pred CCCCHHHHHHHHHhC
Confidence 666788888889875
No 94
>PRK10566 esterase; Provisional
Probab=90.03 E-value=0.71 Score=43.28 Aligned_cols=111 Identities=12% Similarity=0.157 Sum_probs=63.2
Q ss_pred EEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccC
Q 012276 56 LFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSY 135 (467)
Q Consensus 56 lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy 135 (467)
.++.++++....+..|+||.++|++|....+..+.. .+.. +-.+++.+|.| |.|-|+
T Consensus 13 ~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~----------------~l~~------~G~~v~~~d~~-g~G~~~ 69 (249)
T PRK10566 13 EVLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAV----------------ALAQ------AGFRVIMPDAP-MHGARF 69 (249)
T ss_pred ceEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHH----------------HHHh------CCCEEEEecCC-cccccC
Confidence 344444543333457999999999987654322210 1110 11678999977 887665
Q ss_pred ccCCCC-C---ccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHH
Q 012276 136 ARTPHA-S---QTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQR 190 (467)
Q Consensus 136 ~~~~~~-~---~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~ 190 (467)
...... . .....+..+++..++ .++...+.....+++|+|+|+||..+-.++.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 70 SGDEARRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred CCccccchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 322110 0 001123344554444 33444444445689999999999998877653
No 95
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=89.28 E-value=0.44 Score=43.51 Aligned_cols=77 Identities=14% Similarity=0.140 Sum_probs=52.6
Q ss_pred ceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCC
Q 012276 121 SILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIK 200 (467)
Q Consensus 121 nllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~ 200 (467)
+|+-+|+| |+|+|..... ....+-..+++.+.+..+.++.+ ..++++.|+||||..+-.+|..-.+
T Consensus 2 ~vi~~d~r-G~g~S~~~~~---~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~------- 67 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPHWD---PDFPDYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE------- 67 (230)
T ss_dssp EEEEEECT-TSTTSSSCCG---SGSCTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG-------
T ss_pred EEEEEeCC-CCCCCCCCcc---CCcccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch-------
Confidence 68889988 9999984100 11222334555666666666554 3459999999999988887765443
Q ss_pred cceeceeeEecCCc
Q 012276 201 PLINLQGYILGNPR 214 (467)
Q Consensus 201 ~~inLkGi~igng~ 214 (467)
.++++++.++.
T Consensus 68 ---~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 ---RVKKLVLISPP 78 (230)
T ss_dssp ---GEEEEEEESES
T ss_pred ---hhcCcEEEeee
Confidence 38999998886
No 96
>PRK11460 putative hydrolase; Provisional
Probab=89.25 E-value=0.5 Score=44.23 Aligned_cols=62 Identities=15% Similarity=0.082 Sum_probs=46.2
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
..+|++.+|..|.++|+...++..+.|+ ..+.+.++.++.++||.+..+.-+.+.+-|.
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~---------------------~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALI---------------------SLGGDVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHH---------------------HCCCCeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 5799999999999999999888888763 0123577888899999997555455554444
Q ss_pred HHH
Q 012276 460 RWI 462 (467)
Q Consensus 460 ~fl 462 (467)
++|
T Consensus 207 ~~l 209 (232)
T PRK11460 207 YTV 209 (232)
T ss_pred HHc
Confidence 444
No 97
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=88.80 E-value=0.78 Score=44.52 Aligned_cols=60 Identities=13% Similarity=0.159 Sum_probs=45.6
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
..+||+..|-.+--++..-..+.... + .+..+..+++|||+|..|+|+....+|.
T Consensus 253 ~~pvlfi~g~~S~fv~~~~~~~~~~~------------------------f-p~~e~~~ld~aGHwVh~E~P~~~~~~i~ 307 (315)
T KOG2382|consen 253 TGPVLFIKGLQSKFVPDEHYPRMEKI------------------------F-PNVEVHELDEAGHWVHLEKPEEFIESIS 307 (315)
T ss_pred ccceeEEecCCCCCcChhHHHHHHHh------------------------c-cchheeecccCCceeecCCHHHHHHHHH
Confidence 57899998888777776543333222 2 3456678888999999999999999999
Q ss_pred HHHcC
Q 012276 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
.|+..
T Consensus 308 ~Fl~~ 312 (315)
T KOG2382|consen 308 EFLEE 312 (315)
T ss_pred HHhcc
Confidence 99854
No 98
>PRK05855 short chain dehydrogenase; Validated
Probab=88.74 E-value=0.47 Score=50.59 Aligned_cols=59 Identities=10% Similarity=0.053 Sum_probs=45.1
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
.+++||.+|+.|.+++....+.+.+. . .+..++++ .+||+.+.++|++..+.|.
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~~------------------------~-~~~~~~~~-~~gH~~~~e~p~~~~~~i~ 286 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSRW------------------------V-PRLWRREI-KAGHWLPMSHPQVLAAAVA 286 (582)
T ss_pred cCceEEEEeCCCcccCHHHhcccccc------------------------C-CcceEEEc-cCCCcchhhChhHHHHHHH
Confidence 68999999999999997654433211 1 23444555 5799999999999999999
Q ss_pred HHHcC
Q 012276 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
+|+..
T Consensus 287 ~fl~~ 291 (582)
T PRK05855 287 EFVDA 291 (582)
T ss_pred HHHHh
Confidence 99964
No 99
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=88.57 E-value=0.65 Score=42.53 Aligned_cols=64 Identities=16% Similarity=0.189 Sum_probs=46.1
Q ss_pred cCCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCc-HHHHHH
Q 012276 379 KGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRP-AECYAM 457 (467)
Q Consensus 379 ~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP-~~a~~m 457 (467)
...+|||.+|..|.+||...++++.+.|.- .+....+++..++||-...++. ....+.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~---------------------~g~~~~~~~~p~~gH~~~~~~~~~~~~~~ 201 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRK---------------------AGKPVELLIFPGEGHGFGNPENRRDWYER 201 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHH---------------------TTSSEEEEEETT-SSSTTSHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHh---------------------cCCCEEEEEcCcCCCCCCCchhHHHHHHH
Confidence 468999999999999999999999998841 1235888999999995553322 244445
Q ss_pred HHHHHc
Q 012276 458 FQRWIN 463 (467)
Q Consensus 458 i~~fl~ 463 (467)
+.+|+.
T Consensus 202 ~~~f~~ 207 (213)
T PF00326_consen 202 ILDFFD 207 (213)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555553
No 100
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=87.57 E-value=0.92 Score=40.75 Aligned_cols=65 Identities=14% Similarity=0.207 Sum_probs=52.6
Q ss_pred cChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCc
Q 012276 144 TGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 144 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p 217 (467)
++.+++|.|+.+.++.+.++ +..+.+.|+|-|+|.=-+|.+..++-...+ =.++++++..+-...
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~r------~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAALR------ARVAQVVLLSPSTTA 109 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHHH------hheeEEEEeccCCcc
Confidence 57789999999999998874 457789999999999999999998876542 338888887765443
No 101
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=87.49 E-value=5.7 Score=38.03 Aligned_cols=102 Identities=19% Similarity=0.199 Sum_probs=64.5
Q ss_pred CCCCCCEEEEECCCCchHH----HhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCC
Q 012276 66 NPKEDPLLLWLTGGPGCSA----FSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHA 141 (467)
Q Consensus 66 ~~~~~Pl~lWlnGGPG~SS----~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~ 141 (467)
..+...+|+=++|-||+-- +--.|.|.|=.. |=|.-| |-||+-......
T Consensus 31 ~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~--------------------------I~iN~P-Gf~~t~~~~~~~ 83 (297)
T PF06342_consen 31 SGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRF--------------------------IGINYP-GFGFTPGYPDQQ 83 (297)
T ss_pred CCCCceeEEEecCCCCCccchhhhhhHHHHcCeEE--------------------------EEeCCC-CCCCCCCCcccc
Confidence 3445668999999999652 222333333333 334557 888886544333
Q ss_pred CccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCc
Q 012276 142 SQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (467)
Q Consensus 142 ~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~ 214 (467)
+. -++ -..|...+++.- +++ ..+.+.|+|-|+--+-.+|... .+.|+++.||.
T Consensus 84 ~~--n~e----r~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~------------~~~g~~lin~~ 136 (297)
T PF06342_consen 84 YT--NEE----RQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH------------PLHGLVLINPP 136 (297)
T ss_pred cC--hHH----HHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC------------ccceEEEecCC
Confidence 22 222 345666666554 344 4788889999998887777544 27899999986
No 102
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=87.15 E-value=3.5 Score=40.27 Aligned_cols=45 Identities=24% Similarity=0.230 Sum_probs=37.7
Q ss_pred CCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCchh
Q 012276 169 SNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVV 219 (467)
Q Consensus 169 ~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~~ 219 (467)
.+++.|+|+|=||+.+-.++....++. ...+++.++..|++|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 467999999999999999999887752 234899999999998864
No 103
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=86.90 E-value=1.2 Score=37.66 Aligned_cols=62 Identities=16% Similarity=0.309 Sum_probs=46.2
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
...+.+.+.|++..+++| ...+.|+|+|-||-.+-.+|..+.++... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCccc
Confidence 455667788888878887 45799999999999999999999876421 135678888888765
No 104
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=86.07 E-value=3.7 Score=42.04 Aligned_cols=36 Identities=11% Similarity=0.110 Sum_probs=27.7
Q ss_pred CCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 170 NPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 170 ~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
....|+|.||||.-+-+++.+-.+. +.+++..+|-+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~----------Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPER----------FGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCccc----------ccEEEEeccce
Confidence 3589999999999888887654333 78888888754
No 105
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=86.01 E-value=1.1 Score=40.74 Aligned_cols=63 Identities=24% Similarity=0.265 Sum_probs=45.0
Q ss_pred HhHHHHHHHHHHHHHh---CCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCc
Q 012276 148 KQVHHLDQFLRKWLMD---HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~---fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p 217 (467)
++.+|+.++++-..+. + .+...+++|+|+|=||+.+-.++.++.+.. ...++++++..|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~------~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRG------LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTT------TCHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhc------ccchhhhhcccccccc
Confidence 3445555554443332 2 244568999999999999999998887763 1239999999998876
No 106
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=85.87 E-value=0.53 Score=45.17 Aligned_cols=83 Identities=19% Similarity=0.208 Sum_probs=52.6
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCC
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 199 (467)
.-+|.+| .-|+|-|.+.-... ..+-++|.++. .+|+...| +-+-++-++|-||+|......|..-..
T Consensus 58 Y~vV~~D-~RG~g~S~G~~~~~----~~~e~~D~~d~-I~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~~p------ 124 (272)
T PF02129_consen 58 YAVVVQD-VRGTGGSEGEFDPM----SPNEAQDGYDT-IEWIAAQP-WSNGKVGMYGISYGGFTQWAAAARRPP------ 124 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-TT----SHHHHHHHHHH-HHHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT-T------
T ss_pred CEEEEEC-CcccccCCCccccC----ChhHHHHHHHH-HHHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcCCC------
Confidence 5788999 66999998764321 22334444433 34555565 444479999999999998888752222
Q ss_pred CcceeceeeEecCCccCchh
Q 012276 200 KPLINLQGYILGNPRTDMVV 219 (467)
Q Consensus 200 ~~~inLkGi~igng~i~p~~ 219 (467)
.||.|+...+..|...
T Consensus 125 ----~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 125 ----HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ----TEEEEEEESE-SBTCC
T ss_pred ----CceEEEecccCCcccc
Confidence 2999999999887654
No 107
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=85.87 E-value=2.9 Score=46.11 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=58.3
Q ss_pred CCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCcc---------CC
Q 012276 69 EDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYAR---------TP 139 (467)
Q Consensus 69 ~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~---------~~ 139 (467)
..|+|++++|=.|....+-.+.+. |.. .-..++-+|.| |.|-|... ..
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~----------------La~------~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~ 504 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGT----------------LAA------AGVATIAIDHP-LHGARSFDANASGVNATNA 504 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHH----------------HHh------CCcEEEEeCCC-CCCcccccccccccccccc
Confidence 358999999988877654332211 100 01346666655 66666221 11
Q ss_pred CC--C---------ccChhHhHHHHHHHHHHHH------H---hCCCCCCCCeEEEecccCCccHHHHHHH
Q 012276 140 HA--S---------QTGDFKQVHHLDQFLRKWL------M---DHPEFISNPFYVGGDSYSGITVPALVQR 190 (467)
Q Consensus 140 ~~--~---------~~~~~~~a~d~~~fL~~f~------~---~fp~~~~~~~yi~GESYgG~yvP~la~~ 190 (467)
+. | ..+.++.+.|+.......- . .+..+...++++.|||.||..+..++..
T Consensus 505 ~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 505 NVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1 1256788888775554331 1 1223446799999999999999888853
No 108
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=85.29 E-value=1.1 Score=49.78 Aligned_cols=90 Identities=13% Similarity=0.179 Sum_probs=56.7
Q ss_pred ccccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHH----HHH------hCCCCCCCCeEEEecccCCccHHH
Q 012276 117 TKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRK----WLM------DHPEFISNPFYVGGDSYSGITVPA 186 (467)
Q Consensus 117 ~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~----f~~------~fp~~~~~~~yi~GESYgG~yvP~ 186 (467)
.+=..+|++| ..|+|-|-+.-.. ....+.+.+.+..+||.. |.. .-..|.+-.+-++|.||+|...-.
T Consensus 277 ~rGYaVV~~D-~RGtg~SeG~~~~-~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~ 354 (767)
T PRK05371 277 PRGFAVVYVS-GIGTRGSDGCPTT-GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNA 354 (767)
T ss_pred hCCeEEEEEc-CCCCCCCCCcCcc-CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHH
Confidence 3457899999 5599999875321 122333444445555542 100 012244558999999999988776
Q ss_pred HHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 187 LVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 187 la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
+|..-.. .||.|+-..|+.+..
T Consensus 355 aAa~~pp----------~LkAIVp~a~is~~y 376 (767)
T PRK05371 355 VATTGVE----------GLETIIPEAAISSWY 376 (767)
T ss_pred HHhhCCC----------cceEEEeeCCCCcHH
Confidence 6643322 299999988887753
No 109
>PLN02571 triacylglycerol lipase
Probab=85.26 E-value=2.5 Score=42.80 Aligned_cols=69 Identities=7% Similarity=0.073 Sum_probs=50.0
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhcc--cc--CCCcceeceeeEecCCccCc
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNEN--EE--DIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~--~~--~~~~~inLkGi~igng~i~p 217 (467)
.+.+++...|+.+++++|.. ..+++|+|||.||-.+-..|..|.... .. .....+++..+..|.|-+..
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 45677889999998888765 347999999999999988888886532 10 11123557778888877653
No 110
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=84.90 E-value=1.8 Score=41.54 Aligned_cols=70 Identities=16% Similarity=0.177 Sum_probs=46.5
Q ss_pred hhhcCCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccC-CCCCcHHH
Q 012276 376 LSTKGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTA-PEYRPAEC 454 (467)
Q Consensus 376 lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmv-P~DqP~~a 454 (467)
|..-++++|+..|..|... ..+.+.+... ..|+. .. .. .+.+.+++.+|||.+ ..+.|++.
T Consensus 203 l~~~~~P~ll~~g~~D~~~-----~~~~~~~~~~--~~~~~---------~l-~~-~~v~~~~~~~~~H~l~~e~~~~~v 264 (274)
T TIGR03100 203 LERFQGPVLFILSGNDLTA-----QEFADSVLGE--PAWRG---------AL-ED-PGIERVEIDGADHTFSDRVWREWV 264 (274)
T ss_pred HHhcCCcEEEEEcCcchhH-----HHHHHHhccC--hhhHH---------Hh-hc-CCeEEEecCCCCcccccHHHHHHH
Confidence 3344799999999999863 2333332110 00000 00 12 568889999999999 56666999
Q ss_pred HHHHHHHHc
Q 012276 455 YAMFQRWIN 463 (467)
Q Consensus 455 ~~mi~~fl~ 463 (467)
.+.|.+||.
T Consensus 265 ~~~i~~wL~ 273 (274)
T TIGR03100 265 AARTTEWLR 273 (274)
T ss_pred HHHHHHHHh
Confidence 999999995
No 111
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=84.54 E-value=2.5 Score=36.49 Aligned_cols=60 Identities=18% Similarity=0.187 Sum_probs=39.6
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
.+++.+...+++....+| ..+++|+|+|.||..+-.+|..+.++.. .-..+-+..|.|-+
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~~~-----~~~~~~~~fg~p~~ 68 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGRGL-----GRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhccC-----CCceEEEEeCCCcc
Confidence 344455555666555556 4589999999999999999988876521 12245555555543
No 112
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=84.38 E-value=4.7 Score=47.71 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=68.9
Q ss_pred CCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhHh
Q 012276 70 DPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQ 149 (467)
Q Consensus 70 ~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~ 149 (467)
.|-++.++|+.|.+..+..+.+. + .....++-+|.| |.|-+. ....+.++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~----------------l-------~~~~~v~~~~~~-g~~~~~-----~~~~~l~~l 1118 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRY----------------L-------DPQWSIYGIQSP-RPDGPM-----QTATSLDEV 1118 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHh----------------c-------CCCCcEEEEECC-CCCCCC-----CCCCCHHHH
Confidence 46688899999988776544421 1 122567778888 666331 113566778
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCc
Q 012276 150 VHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (467)
Q Consensus 150 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~ 214 (467)
|+++.+.++. ..+ ..|+.+.|+|+||.-+-.+|.++.++. ..+..+++.+++
T Consensus 1119 a~~~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~-------~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1119 CEAHLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG-------EEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC-------CceeEEEEecCC
Confidence 8887777764 223 348999999999999999998886542 236677766654
No 113
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=84.20 E-value=1.8 Score=40.54 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=46.4
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
..+..|.+||+...+.. ...+++|.+||.|++-+-.....+...... ....-.|..|++.+|-++..
T Consensus 74 ~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 74 FSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHH
Confidence 45555666666554332 256899999999999988887777666421 01123689999999998875
No 114
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=83.59 E-value=2.1 Score=42.62 Aligned_cols=61 Identities=20% Similarity=0.245 Sum_probs=46.6
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCc---HHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRP---AECYA 456 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP---~~a~~ 456 (467)
.++|++.+|..|.+++....+.+.+.+. +...++.++ .+||+-+.+.| +.+..
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~-----------------------~~~~~~~~~-~~gH~~~~~~~~~~~~v~~ 341 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVS-----------------------SEDYTELSF-PGGHIGIYVSGKAQKEVPP 341 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcC-----------------------CCCeEEEEc-CCCCEEEEECchhHhhhhH
Confidence 6899999999999999999888888753 122444444 58999988866 56677
Q ss_pred HHHHHHcC
Q 012276 457 MFQRWINH 464 (467)
Q Consensus 457 mi~~fl~~ 464 (467)
-+.+||..
T Consensus 342 ~i~~wl~~ 349 (350)
T TIGR01836 342 AIGKWLQA 349 (350)
T ss_pred HHHHHHHh
Confidence 77788864
No 115
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=83.58 E-value=2.8 Score=40.20 Aligned_cols=59 Identities=14% Similarity=0.061 Sum_probs=48.1
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
.+++++..|..|.++|..-.+++++.+. +-+.++| .+||+.+..+|+..-++|.
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~-------------------------~~~~~~l-~~gH~p~ls~P~~~~~~i~ 264 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP-------------------------PSQVYEL-ESDHSPFFSTPFLLFGLLI 264 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC-------------------------ccEEEEE-CCCCCccccCHHHHHHHHH
Confidence 5899999999999999987777776642 1245677 4999999999999999998
Q ss_pred HHHcC
Q 012276 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
+....
T Consensus 265 ~~a~~ 269 (273)
T PLN02211 265 KAAAS 269 (273)
T ss_pred HHHHH
Confidence 87643
No 116
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=83.39 E-value=5.5 Score=41.03 Aligned_cols=112 Identities=16% Similarity=0.192 Sum_probs=62.9
Q ss_pred eEEEEEeecCCCCCCCCEEEEECCCC---chHHH----hHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecC
Q 012276 55 QLFYYFVKSDKNPKEDPLLLWLTGGP---GCSAF----SGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDS 127 (467)
Q Consensus 55 ~lFy~f~es~~~~~~~Pl~lWlnGGP---G~SS~----~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDq 127 (467)
.||-=.+....+.+..||++|++||= |.+|. -..|.+.|=+.+-.-+ -..+...|.....+-
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvN-------YRLG~lGfL~~~~~~---- 147 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVN-------YRLGALGFLDLSSLD---- 147 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeC-------cccccceeeehhhcc----
Confidence 35553332223455679999999995 66654 3567777755554322 234566655544221
Q ss_pred CccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHH
Q 012276 128 PVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPAL 187 (467)
Q Consensus 128 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 187 (467)
+-.++.++ ..-.| +++ -++++++.++.|-.=. ..+-|+|||-|++-|-.+
T Consensus 148 ---~~~~~~~n---~Gl~D-qil--ALkWV~~NIe~FGGDp-~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 148 ---TEDAFASN---LGLLD-QIL--ALKWVRDNIEAFGGDP-QNVTLFGESAGAASILTL 197 (491)
T ss_pred ---cccccccc---ccHHH-HHH--HHHHHHHHHHHhCCCc-cceEEeeccchHHHHHHh
Confidence 11222111 11122 221 3688899988885432 369999999877655443
No 117
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=82.93 E-value=2.7 Score=39.10 Aligned_cols=60 Identities=22% Similarity=0.299 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccC
Q 012276 149 QVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (467)
Q Consensus 149 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~ 216 (467)
+.+++...++...+++| +.+++++|+|-||-.+-.+|..+.++. ...+++.+..|.|-+.
T Consensus 110 ~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 110 LYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCC
Confidence 34445566666666666 457999999999999998888887653 1345888888888763
No 118
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=82.91 E-value=2.5 Score=42.54 Aligned_cols=61 Identities=18% Similarity=0.032 Sum_probs=47.0
Q ss_pred HhHHHHHHHHHHHHHhCCCCCC-CCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 148 KQVHHLDQFLRKWLMDHPEFIS-NPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
-+|.|...+|..-...||.... .|+.+.|.|||| |...++.+|.=. .+.||+=-++++-|.
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~aP~---------~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIAPW---------LFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhCcc---------ceeEEEecCccccch
Confidence 3788889999888888999875 799999999988 556666677332 377777777777664
No 119
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=82.91 E-value=1.9 Score=41.92 Aligned_cols=65 Identities=25% Similarity=0.399 Sum_probs=49.4
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEe-cceEEEEEcCCcccCC--CCCcHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYS-NQMTYATVKGGGHTAP--EYRPAECYA 456 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~-~~Ltf~~V~~AGHmvP--~DqP~~a~~ 456 (467)
+.+|+||+|..|-++|+..++..++++- + .+ .+++|.++.+++|+.. ...|.+.--
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c--------------------~-~G~a~V~~~~~~~~~H~~~~~~~~~~a~~W 277 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWC--------------------A-AGGADVEYVRYPGGGHLGAAFASAPDALAW 277 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHH--------------------H-cCCCCEEEEecCCCChhhhhhcCcHHHHHH
Confidence 6899999999999999999999998852 1 12 3689999999999964 567666555
Q ss_pred HHHHHHcCCC
Q 012276 457 MFQRWINHDP 466 (467)
Q Consensus 457 mi~~fl~~~~ 466 (467)
|-+|| .|+|
T Consensus 278 l~~rf-~G~~ 286 (290)
T PF03583_consen 278 LDDRF-AGKP 286 (290)
T ss_pred HHHHH-CCCC
Confidence 54444 3443
No 120
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=82.80 E-value=3.4 Score=40.23 Aligned_cols=43 Identities=21% Similarity=0.285 Sum_probs=34.9
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCC
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAP 447 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP 447 (467)
.+++||.+|+.|.+||....+++.+.+ .+..++++.++||+..
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~-------------------------~~~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAF-------------------------PEAELKVTNNAGHSAF 290 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhC-------------------------CCCEEEEECCCCCCCC
Confidence 589999999999999998777666653 2455688899999974
No 121
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=82.21 E-value=4 Score=37.00 Aligned_cols=62 Identities=19% Similarity=0.277 Sum_probs=45.2
Q ss_pred hcCCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHH
Q 012276 378 TKGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAM 457 (467)
Q Consensus 378 ~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m 457 (467)
....++++..|..|.+.+....+.+...+. ....++++.++||+...++|+...+.
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~~~p~~~~~~ 274 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALP------------------------NDARLVVIPGAGHFPHLEAPEAFAAA 274 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCC------------------------CCceEEEeCCCCCcchhhcHHHHHHH
Confidence 346999999999996666554333433321 13677899999999999999988777
Q ss_pred HHHHHc
Q 012276 458 FQRWIN 463 (467)
Q Consensus 458 i~~fl~ 463 (467)
+..|+.
T Consensus 275 i~~~~~ 280 (282)
T COG0596 275 LLAFLE 280 (282)
T ss_pred HHHHHh
Confidence 776543
No 122
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=81.99 E-value=2.3 Score=38.86 Aligned_cols=45 Identities=13% Similarity=0.233 Sum_probs=36.2
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhc
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 194 (467)
-+-.|+.+++..|++.+++ +|||.|+|+|=|+..+-.|.+...+.
T Consensus 75 ~ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~~ 119 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIAG 119 (207)
T ss_pred hhHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhcC
Confidence 4556788889999988765 78999999999998888777765554
No 123
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=81.69 E-value=1.2 Score=41.08 Aligned_cols=59 Identities=24% Similarity=0.384 Sum_probs=40.9
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
+.+|++.+|+.|.++|....+...+.|+ ....+++|.+..|.||-++ ...+..+.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~---------------------~~~~~v~~~~~~g~gH~i~----~~~~~~~~ 209 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLK---------------------AAGANVEFHEYPGGGHEIS----PEELRDLR 209 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHH---------------------CTT-GEEEEEETT-SSS------HHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHH---------------------hcCCCEEEEEcCCCCCCCC----HHHHHHHH
Confidence 5799999999999999998777766652 1123688999999999996 45566677
Q ss_pred HHHc
Q 012276 460 RWIN 463 (467)
Q Consensus 460 ~fl~ 463 (467)
+||.
T Consensus 210 ~~l~ 213 (216)
T PF02230_consen 210 EFLE 213 (216)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7775
No 124
>COG4099 Predicted peptidase [General function prediction only]
Probab=81.43 E-value=25 Score=33.97 Aligned_cols=132 Identities=19% Similarity=0.175 Sum_probs=68.4
Q ss_pred CCCeeEEEEEeecC-CCC--CCCCEEEEECCCCchHH-H-hHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeee
Q 012276 51 SEEAQLFYYFVKSD-KNP--KEDPLLLWLTGGPGCSA-F-SGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFV 125 (467)
Q Consensus 51 ~~~~~lFy~f~es~-~~~--~~~Pl~lWlnGGPG~SS-~-~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfI 125 (467)
+.+..|=|-||..+ -+| +--||||||+|+=-.++ - .-+....|-..+..- -+=-||
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~p-------------------edqcfV 229 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGP-------------------EDQCFV 229 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecc-------------------cCceEE
Confidence 45788999877543 233 33499999999753333 2 223333443333211 000333
Q ss_pred cCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceec
Q 012276 126 DSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINL 205 (467)
Q Consensus 126 DqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inL 205 (467)
=.|= |+-.-.+.+- .++ .-=....+.+.+-+...+..-.+.+|++|-|-||.-.=+++.+.-+- +
T Consensus 230 lAPQ---y~~if~d~e~-~t~-~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf----------F 294 (387)
T COG4099 230 LAPQ---YNPIFADSEE-KTL-LYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF----------F 294 (387)
T ss_pred Eccc---cccccccccc-ccc-hhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh----------h
Confidence 3332 2211111100 011 11111334445444566677778999999999998777666555433 6
Q ss_pred eeeEecCCccC
Q 012276 206 QGYILGNPRTD 216 (467)
Q Consensus 206 kGi~igng~i~ 216 (467)
.+.+...|==|
T Consensus 295 Aaa~~iaG~~d 305 (387)
T COG4099 295 AAAVPIAGGGD 305 (387)
T ss_pred heeeeecCCCc
Confidence 66666665444
No 125
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=81.10 E-value=2.3 Score=38.33 Aligned_cols=39 Identities=23% Similarity=0.254 Sum_probs=31.1
Q ss_pred CCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCchhh
Q 012276 169 SNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVE 220 (467)
Q Consensus 169 ~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~~~ 220 (467)
...+.|+|-|-||.|+-.+|.+. +++. ++.||.+.|...
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~ 96 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYEL 96 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHH
Confidence 34599999999999999998655 2555 778999998643
No 126
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=81.01 E-value=3.9 Score=40.12 Aligned_cols=61 Identities=21% Similarity=0.203 Sum_probs=40.5
Q ss_pred cccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCC-CCCCCCeEEEecccCCccHHH
Q 012276 118 KEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHP-EFISNPFYVGGDSYSGITVPA 186 (467)
Q Consensus 118 ~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp-~~~~~~~yi~GESYgG~yvP~ 186 (467)
..+|++...-| |||+|.+... .++.+++ ++++.+++...+ .-+.+.+.+.|+|-||--...
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~~s------~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGPPS------RKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred cCCcEEEECCC-ccccCCCCCC------HHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 45899999977 9999976532 2333343 444555554433 345578999999999966443
No 127
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=81.00 E-value=2.4 Score=43.68 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=46.0
Q ss_pred cChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCchhhcc
Q 012276 144 TGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVEQN 222 (467)
Q Consensus 144 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~~~~~ 222 (467)
-+.+|+-.|+..|++.+-.++....+.|+.++|-||||..+.-+-.+--+ + +.|.+--++.+....+..
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~---------~-~~ga~ASSapv~a~~df~ 155 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH---------L-FDGAWASSAPVQAKVDFW 155 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT---------T--SEEEEET--CCHCCTTT
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC---------e-eEEEEeccceeeeecccH
Confidence 36679999999999998767766667799999999999776555543322 1 677777777776655443
No 128
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=80.95 E-value=9.7 Score=28.95 Aligned_cols=78 Identities=18% Similarity=0.187 Sum_probs=48.9
Q ss_pred eeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccc
Q 012276 54 AQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGF 133 (467)
Q Consensus 54 ~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGf 133 (467)
.+||+..++..+. .+.+|+.++|--..|.- +.++....-. +- ..|+-+|+. |-|.
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r---y~~~a~~L~~-------------~G------~~V~~~D~r-GhG~ 56 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGR---YAHLAEFLAE-------------QG------YAVFAYDHR-GHGR 56 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHH---HHHHHHHHHh-------------CC------CEEEEECCC-cCCC
Confidence 4688866654432 67899999987444443 3333322221 21 678899977 9999
Q ss_pred cCccCCCCCccChhHhHHHHHHHHH
Q 012276 134 SYARTPHASQTGDFKQVHHLDQFLR 158 (467)
Q Consensus 134 Sy~~~~~~~~~~~~~~a~d~~~fL~ 158 (467)
|-+.. ....+-++..+|+..|++
T Consensus 57 S~g~r--g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 57 SEGKR--GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCCcc--cccCCHHHHHHHHHHHhC
Confidence 97533 234566677777777663
No 129
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=80.53 E-value=3.1 Score=34.88 Aligned_cols=44 Identities=20% Similarity=0.290 Sum_probs=34.6
Q ss_pred hcCCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCccc
Q 012276 378 TKGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHT 445 (467)
Q Consensus 378 ~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHm 445 (467)
...++|++.+|..|.+++....+++.++++ .+-++..|.|+||+
T Consensus 102 ~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 102 KIRIPVLFIHGENDPLVPPEQVRRLYEALP------------------------GPKELYIIPGAGHF 145 (145)
T ss_dssp TTTSEEEEEEETT-SSSHHHHHHHHHHHHC------------------------SSEEEEEETTS-TT
T ss_pred ccCCcEEEEEECCCCcCCHHHHHHHHHHcC------------------------CCcEEEEeCCCcCc
Confidence 346899999999999999998898888863 23556899999996
No 130
>COG0400 Predicted esterase [General function prediction only]
Probab=80.29 E-value=8.1 Score=35.47 Aligned_cols=80 Identities=15% Similarity=-0.015 Sum_probs=52.1
Q ss_pred CccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceecee
Q 012276 128 PVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQG 207 (467)
Q Consensus 128 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkG 207 (467)
+....|+..+...--..+....++.+.+||....+.+. ...+++++.|-|=|+.++-.+..+..+ .++|
T Consensus 58 g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~~~----------~~~~ 126 (207)
T COG0400 58 GGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTLPG----------LFAG 126 (207)
T ss_pred CcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhCch----------hhcc
Confidence 44455555433211012344555667788888777663 345689999999999887777654422 3899
Q ss_pred eEecCCccCch
Q 012276 208 YILGNPRTDMV 218 (467)
Q Consensus 208 i~igng~i~p~ 218 (467)
+++-+|..-+.
T Consensus 127 ail~~g~~~~~ 137 (207)
T COG0400 127 AILFSGMLPLE 137 (207)
T ss_pred chhcCCcCCCC
Confidence 99999887654
No 131
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=80.07 E-value=11 Score=37.49 Aligned_cols=79 Identities=6% Similarity=-0.038 Sum_probs=46.3
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhH-HHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccC
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQV-HHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a-~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 198 (467)
.+++-+|-. |-|.|.. ..+.++.+ +++.+++....+..+ ..++++.|+|+||..+-.++..-.+
T Consensus 95 ~~V~~~D~~-g~g~s~~------~~~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~~~----- 159 (350)
T TIGR01836 95 QDVYLIDWG-YPDRADR------YLTLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALYPD----- 159 (350)
T ss_pred CeEEEEeCC-CCCHHHh------cCCHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhCch-----
Confidence 467777743 5554421 11222232 334455554444443 4589999999999877665543211
Q ss_pred CCcceeceeeEecCCccCch
Q 012276 199 IKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 199 ~~~~inLkGi~igng~i~p~ 218 (467)
.++++++.++.++..
T Consensus 160 -----~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 160 -----KIKNLVTMVTPVDFE 174 (350)
T ss_pred -----heeeEEEeccccccC
Confidence 278888888877653
No 132
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=79.55 E-value=3.8 Score=42.22 Aligned_cols=41 Identities=12% Similarity=0.109 Sum_probs=31.6
Q ss_pred hHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHH
Q 012276 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQR 190 (467)
Q Consensus 147 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~ 190 (467)
++..+++.+.+...++..+ .+++.|.|+|.||..+-.++..
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 3456778888888777654 5699999999999888777653
No 133
>COG0400 Predicted esterase [General function prediction only]
Probab=79.17 E-value=2.3 Score=39.03 Aligned_cols=60 Identities=22% Similarity=0.392 Sum_probs=43.4
Q ss_pred cCCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHH
Q 012276 379 KGYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMF 458 (467)
Q Consensus 379 ~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi 458 (467)
++.+|++.+|..|-+||..-+++..+.|. .. ..+..+.++. .||.++.+- ++-+
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~---------------~~------g~~v~~~~~~-~GH~i~~e~----~~~~ 198 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLT---------------AS------GADVEVRWHE-GGHEIPPEE----LEAA 198 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHH---------------Hc------CCCEEEEEec-CCCcCCHHH----HHHH
Confidence 47999999999999999999888887763 11 2345556666 999997544 4444
Q ss_pred HHHHcC
Q 012276 459 QRWINH 464 (467)
Q Consensus 459 ~~fl~~ 464 (467)
++|+.+
T Consensus 199 ~~wl~~ 204 (207)
T COG0400 199 RSWLAN 204 (207)
T ss_pred HHHHHh
Confidence 556654
No 134
>PRK13604 luxD acyl transferase; Provisional
Probab=78.65 E-value=25 Score=34.36 Aligned_cols=45 Identities=13% Similarity=0.204 Sum_probs=38.4
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCC
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAP 447 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP 447 (467)
+.+||+.+|+.|..|+..+++...++++ .++-.+..+.||+|...
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~-----------------------s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIR-----------------------SEQCKLYSLIGSSHDLG 246 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhc-----------------------cCCcEEEEeCCCccccC
Confidence 5899999999999999999999998852 14577789999999864
No 135
>PLN02753 triacylglycerol lipase
Probab=78.42 E-value=5.7 Score=41.38 Aligned_cols=73 Identities=15% Similarity=0.183 Sum_probs=51.1
Q ss_pred ChhHhHHHHHHHHHHHHHhCCC--CCCCCeEEEecccCCccHHHHHHHHHhcc--ccCCCcceeceeeEecCCccCc
Q 012276 145 GDFKQVHHLDQFLRKWLMDHPE--FISNPFYVGGDSYSGITVPALVQRISNEN--EEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 145 ~~~~~a~d~~~fL~~f~~~fp~--~~~~~~yi~GESYgG~yvP~la~~i~~~~--~~~~~~~inLkGi~igng~i~p 217 (467)
+...+.+++...++...+++|. .....++|+|+|.||-.+-..|..|.... +......+++.-+..|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 3345778899999999888864 22457999999999999999998886532 1111123556677777776643
No 136
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=77.81 E-value=3.7 Score=41.19 Aligned_cols=65 Identities=22% Similarity=0.379 Sum_probs=40.2
Q ss_pred cceeeec-------CCccccccCccCCC-CCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHH
Q 012276 120 ASILFVD-------SPVGTGFSYARTPH-ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPAL 187 (467)
Q Consensus 120 anllfID-------qPvGtGfSy~~~~~-~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 187 (467)
|-|||+| +|.|.- ||.+... .|- +.+|+=.|+...|+ ++++...=+..|+..+|-||||+.+.-+
T Consensus 112 AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL-tseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLaAWf 184 (492)
T KOG2183|consen 112 ALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL-TSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLAAWF 184 (492)
T ss_pred ceEEEeehhccccCCCCcch-hccChhhhccc-cHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHHHHH
Confidence 6677776 677776 5544322 233 44466666555554 4455433345699999999999665443
No 137
>PRK13604 luxD acyl transferase; Provisional
Probab=77.68 E-value=4.8 Score=39.30 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=68.4
Q ss_pred CeeEEEEEeecC-CCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccc
Q 012276 53 EAQLFYYFVKSD-KNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGT 131 (467)
Q Consensus 53 ~~~lFy~f~es~-~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGt 131 (467)
+..|.=|+.+.+ ++++..|+||..+ |.|+... .+...-- .| +.+=.++|-.|.=-|.
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~H-Gf~~~~~--~~~~~A~-------------~L------a~~G~~vLrfD~rg~~ 76 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIAS-GFARRMD--HFAGLAE-------------YL------SSNGFHVIRYDSLHHV 76 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeC-CCCCChH--HHHHHHH-------------HH------HHCCCEEEEecCCCCC
Confidence 677888888765 3455667777655 5666532 1111111 11 1222688888855456
Q ss_pred cccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEec
Q 012276 132 GFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILG 211 (467)
Q Consensus 132 GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ig 211 (467)
|-|-++-. +...+. ...|+..+ .+|++.. . ..+++|.|+|.||.-+...|. . .+++++++.
T Consensus 77 GeS~G~~~-~~t~s~--g~~Dl~aa-id~lk~~-~--~~~I~LiG~SmGgava~~~A~----~--------~~v~~lI~~ 137 (307)
T PRK13604 77 GLSSGTID-EFTMSI--GKNSLLTV-VDWLNTR-G--INNLGLIAASLSARIAYEVIN----E--------IDLSFLITA 137 (307)
T ss_pred CCCCCccc-cCcccc--cHHHHHHH-HHHHHhc-C--CCceEEEEECHHHHHHHHHhc----C--------CCCCEEEEc
Confidence 87754321 111111 13443222 2233332 1 347999999999987533332 1 238999999
Q ss_pred CCccCc
Q 012276 212 NPRTDM 217 (467)
Q Consensus 212 ng~i~p 217 (467)
.|+.+-
T Consensus 138 sp~~~l 143 (307)
T PRK13604 138 VGVVNL 143 (307)
T ss_pred CCcccH
Confidence 999763
No 138
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=77.45 E-value=6.7 Score=36.92 Aligned_cols=78 Identities=17% Similarity=0.233 Sum_probs=52.9
Q ss_pred ccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccC
Q 012276 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEED 198 (467)
Q Consensus 119 ~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 198 (467)
..|++=.|-- |-|.|.++... .+.-+-.+..+++|++ .+- ...++.|+|.|-|..=.-.+|. +.
T Consensus 88 n~nv~~~DYS-GyG~S~G~psE---~n~y~Di~avye~Lr~---~~g--~~~~Iil~G~SiGt~~tv~Las----r~--- 151 (258)
T KOG1552|consen 88 NCNVVSYDYS-GYGRSSGKPSE---RNLYADIKAVYEWLRN---RYG--SPERIILYGQSIGTVPTVDLAS----RY--- 151 (258)
T ss_pred cceEEEEecc-cccccCCCccc---ccchhhHHHHHHHHHh---hcC--CCceEEEEEecCCchhhhhHhh----cC---
Confidence 4677778855 99999887543 2333444557777775 331 3568999999999755333332 21
Q ss_pred CCcceeceeeEecCCccCc
Q 012276 199 IKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 199 ~~~~inLkGi~igng~i~p 217 (467)
. +.|+++-+|+++-
T Consensus 152 ---~--~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 152 ---P--LAAVVLHSPFTSG 165 (258)
T ss_pred ---C--cceEEEeccchhh
Confidence 2 9999999999865
No 139
>KOG3101 consensus Esterase D [General function prediction only]
Probab=77.30 E-value=13 Score=33.91 Aligned_cols=157 Identities=16% Similarity=0.130 Sum_probs=80.6
Q ss_pred eeeeeEEeCC----CCCeeEEE-EEeecC-CCCCCCCEEEEECCCCchHHH--------hHHHHhhcCeEEeccCCCCCC
Q 012276 41 LETGYVGVGE----SEEAQLFY-YFVKSD-KNPKEDPLLLWLTGGPGCSAF--------SGLAYEIGPVNFNTVEYNGSL 106 (467)
Q Consensus 41 ~~sGyl~v~~----~~~~~lFy-~f~es~-~~~~~~Pl~lWlnGGPG~SS~--------~g~~~E~GP~~~~~~~~~~~~ 106 (467)
++-|+..+-+ +.+..|=| -|++.. .+.+.-|+++||.|= -|.-. --.-.++|=..|.++...-+
T Consensus 9 ~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGL-TCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG- 86 (283)
T KOG3101|consen 9 CFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGL-TCTHENFIEKSGFQQQASKHGLAVVAPDTSPRG- 86 (283)
T ss_pred cccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecCC-cccchhhHhhhhHHHhHhhcCeEEECCCCCCCc-
Confidence 4455554422 22345655 455532 233446999999964 34311 12234577777877643211
Q ss_pred CccccCCCCcccccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHH-hCCCCCCCCeEEEecccCCccHH
Q 012276 107 PTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLM-DHPEFISNPFYVGGDSYSGITVP 185 (467)
Q Consensus 107 ~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~-~fp~~~~~~~yi~GESYgG~yvP 185 (467)
-.+.-.+-|| |==.|.||=-..+...+.+.- ..-+.+.+=|-+-+. .+-.+-..+.-|+|+|.|||=+-
T Consensus 87 ~~v~g~~esw---------DFG~GAGFYvnAt~epw~~~y-rMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl 156 (283)
T KOG3101|consen 87 VEVAGDDESW---------DFGQGAGFYVNATQEPWAKHY-RMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGAL 156 (283)
T ss_pred cccCCCcccc---------cccCCceeEEecccchHhhhh-hHHHHHHHHHHHHhccccccccchhcceeccccCCCceE
Confidence 1333345677 334577774322222222211 222333333333322 22223334589999999998654
Q ss_pred HHHHHHHhccccCCCcceeceeeEecCCccCchh
Q 012276 186 ALVQRISNENEEDIKPLINLQGYILGNPRTDMVV 219 (467)
Q Consensus 186 ~la~~i~~~~~~~~~~~inLkGi~igng~i~p~~ 219 (467)
.++.+ | .-..|++..-.|..+|..
T Consensus 157 ~~~Lk----n------~~kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 157 TIYLK----N------PSKYKSVSAFAPICNPIN 180 (283)
T ss_pred EEEEc----C------cccccceeccccccCccc
Confidence 44321 1 113788888888888864
No 140
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=76.36 E-value=2 Score=38.93 Aligned_cols=73 Identities=15% Similarity=0.088 Sum_probs=51.9
Q ss_pred cccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeE
Q 012276 130 GTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYI 209 (467)
Q Consensus 130 GtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ 209 (467)
-|||-++.. .++.++...++..+++--++.+|.-+ .+-+.|+|-|.|.+..+..++.+ -.+.|++
T Consensus 102 svgY~l~~q----~htL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~---------prI~gl~ 166 (270)
T KOG4627|consen 102 SVGYNLCPQ----VHTLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRS---------PRIWGLI 166 (270)
T ss_pred EeccCcCcc----cccHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcC---------chHHHHH
Confidence 456555543 35777888888888877777776532 49999999998887777766532 2278999
Q ss_pred ecCCccCc
Q 012276 210 LGNPRTDM 217 (467)
Q Consensus 210 igng~i~p 217 (467)
+..|+-+-
T Consensus 167 l~~GvY~l 174 (270)
T KOG4627|consen 167 LLCGVYDL 174 (270)
T ss_pred HHhhHhhH
Confidence 98888654
No 141
>PLN02719 triacylglycerol lipase
Probab=76.16 E-value=7 Score=40.60 Aligned_cols=71 Identities=13% Similarity=0.159 Sum_probs=49.9
Q ss_pred hHhHHHHHHHHHHHHHhCCCC--CCCCeEEEecccCCccHHHHHHHHHhcc--ccCCCcceeceeeEecCCccCc
Q 012276 147 FKQVHHLDQFLRKWLMDHPEF--ISNPFYVGGDSYSGITVPALVQRISNEN--EEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 147 ~~~a~d~~~fL~~f~~~fp~~--~~~~~yi~GESYgG~yvP~la~~i~~~~--~~~~~~~inLkGi~igng~i~p 217 (467)
..+.+++...|+...+.+|.. ....+.|+|+|.||-.+-..|..|.+.. +......+++.-+..|.|-+..
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 346778899999998888864 2347999999999999999998887642 1111123445567777766543
No 142
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=75.37 E-value=10 Score=33.76 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=48.5
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCC
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 199 (467)
..++-+|.| |.|.+.. ...+.++.++.....+.. ..+ ..++.++|+|+||..+-.++.++.++.
T Consensus 26 ~~v~~~~~~-g~~~~~~-----~~~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~---- 89 (212)
T smart00824 26 RDVSALPLP-GFGPGEP-----LPASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARG---- 89 (212)
T ss_pred ccEEEecCC-CCCCCCC-----CCCCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCC----
Confidence 578888866 6664422 123444455555444442 333 458999999999999999998887542
Q ss_pred CcceeceeeEecCC
Q 012276 200 KPLINLQGYILGNP 213 (467)
Q Consensus 200 ~~~inLkGi~igng 213 (467)
..++++++.++
T Consensus 90 ---~~~~~l~~~~~ 100 (212)
T smart00824 90 ---IPPAAVVLLDT 100 (212)
T ss_pred ---CCCcEEEEEcc
Confidence 23677766655
No 143
>PLN02324 triacylglycerol lipase
Probab=74.78 E-value=8.7 Score=38.98 Aligned_cols=70 Identities=11% Similarity=0.086 Sum_probs=48.2
Q ss_pred hHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhcccc-----CCCcceeceeeEecCCccCc
Q 012276 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEE-----DIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 147 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~-----~~~~~inLkGi~igng~i~p 217 (467)
..+.+++...|+..++.+|... ..+.|+|||-||-.+-..|..|...... .....+++.-+..|.|-+..
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN 267 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGD 267 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCC
Confidence 3567778888999988887532 3699999999999998888888664210 01123445566666665543
No 144
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=74.35 E-value=16 Score=36.05 Aligned_cols=139 Identities=12% Similarity=0.006 Sum_probs=70.3
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHh---HHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFS---GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPV 129 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~---g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPv 129 (467)
+..++=|+...++.....|.||-++|..|.+... ..+...|=..+..+- .|- .....++... ..+.
T Consensus 66 g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~-rGq-g~~~~d~~~~---------~~~~ 134 (320)
T PF05448_consen 66 GSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDV-RGQ-GGRSPDYRGS---------SGGT 134 (320)
T ss_dssp GEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE---TTT-SSSS-B-SSB---------SSS-
T ss_pred CCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecC-CCC-CCCCCCcccc---------CCCC
Confidence 5667768776664557789999999998875432 245566655554431 110 0001111111 1122
Q ss_pred cccccCccCC---CCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceece
Q 012276 130 GTGFSYARTP---HASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQ 206 (467)
Q Consensus 130 GtGfSy~~~~---~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLk 206 (467)
.-|+-...-. +.+. -..+..|.++++ .|+...|+.-.+.+.++|+|-||...-.+|. +.++ ++
T Consensus 135 ~~g~~~~g~~~~~e~~y--yr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~r----------v~ 200 (320)
T PF05448_consen 135 LKGHITRGIDDNPEDYY--YRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDPR----------VK 200 (320)
T ss_dssp SSSSTTTTTTS-TTT-H--HHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSST-----------S
T ss_pred CccHHhcCccCchHHHH--HHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCcc----------cc
Confidence 2232211000 0000 001223333333 4566889998889999999999988766664 5433 88
Q ss_pred eeEecCCccC
Q 012276 207 GYILGNPRTD 216 (467)
Q Consensus 207 Gi~igng~i~ 216 (467)
+++...|++.
T Consensus 201 ~~~~~vP~l~ 210 (320)
T PF05448_consen 201 AAAADVPFLC 210 (320)
T ss_dssp EEEEESESSS
T ss_pred EEEecCCCcc
Confidence 8888888764
No 145
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=74.21 E-value=14 Score=37.58 Aligned_cols=54 Identities=11% Similarity=0.032 Sum_probs=36.7
Q ss_pred cChhHhHHHHHHHHHHHHHhCCCCCCCCeE-EEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCc
Q 012276 144 TGDFKQVHHLDQFLRKWLMDHPEFISNPFY-VGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (467)
Q Consensus 144 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~y-i~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~ 214 (467)
.+-++.++++.++|+. . .-+++. |.|.|+||.-+-.+|.+--+. ++++++.++.
T Consensus 141 ~t~~d~~~~~~~ll~~----l---gi~~~~~vvG~SmGG~ial~~a~~~P~~----------v~~lv~ia~~ 195 (389)
T PRK06765 141 VTILDFVRVQKELIKS----L---GIARLHAVMGPSMGGMQAQEWAVHYPHM----------VERMIGVIGN 195 (389)
T ss_pred CcHHHHHHHHHHHHHH----c---CCCCceEEEEECHHHHHHHHHHHHChHh----------hheEEEEecC
Confidence 3455555555555543 2 233565 999999999999888766554 7888887764
No 146
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=74.18 E-value=11 Score=35.05 Aligned_cols=87 Identities=20% Similarity=0.243 Sum_probs=58.4
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCC
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 199 (467)
++...|+-|.+.+-=.+-..-.+..+.++.++.+.+.|..+.. ..+++.|+|.|-|+.-+-...+++.+.....
T Consensus 3 ~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~- 76 (225)
T PF08237_consen 3 YNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP- 76 (225)
T ss_pred cceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC-
Confidence 3456677776444311111122345677778888888887654 4779999999999988888888887743211
Q ss_pred CcceeceeeEecCCc
Q 012276 200 KPLINLQGYILGNPR 214 (467)
Q Consensus 200 ~~~inLkGi~igng~ 214 (467)
.-+++-+.+|||-
T Consensus 77 --~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 77 --PDDLSFVLIGNPR 89 (225)
T ss_pred --cCceEEEEecCCC
Confidence 1358999999985
No 147
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=74.13 E-value=15 Score=34.49 Aligned_cols=99 Identities=19% Similarity=0.327 Sum_probs=51.0
Q ss_pred CCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCC---CCcc
Q 012276 68 KEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPH---ASQT 144 (467)
Q Consensus 68 ~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~---~~~~ 144 (467)
.++|+++|+-|-||-+..+--| |--....- . .+ ..-|.-....+ ++.|. |--++.+ .-..
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F---~~~L~~~l---~--~r--~~~wtIsh~~H---~~~P~----sl~~~~s~~~~eif 89 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEF---ARHLHLNL---I--DR--LPVWTISHAGH---ALMPA----SLREDHSHTNEEIF 89 (301)
T ss_pred CCceEEEEecCCCCchhHHHHH---HHHHHHhc---c--cc--cceeEEecccc---ccCCc----cccccccccccccc
Confidence 6789999999999987654333 22111100 0 00 01122222222 23341 1111111 1123
Q ss_pred ChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHH
Q 012276 145 GDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALV 188 (467)
Q Consensus 145 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la 188 (467)
+.++..+.=.+|++++. | +++++||.|+|=|...+-.+-
T Consensus 90 sL~~QV~HKlaFik~~~---P--k~~ki~iiGHSiGaYm~Lqil 128 (301)
T KOG3975|consen 90 SLQDQVDHKLAFIKEYV---P--KDRKIYIIGHSIGAYMVLQIL 128 (301)
T ss_pred chhhHHHHHHHHHHHhC---C--CCCEEEEEecchhHHHHHHHh
Confidence 55556666677887654 3 377999999998765444333
No 148
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=73.25 E-value=8.7 Score=35.90 Aligned_cols=45 Identities=16% Similarity=0.019 Sum_probs=34.4
Q ss_pred hCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 163 DHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 163 ~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
.|+-...+ .+|+|.|.||.-+-.++.+-.+. +.+++..+|.+++.
T Consensus 109 ~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~----------F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 109 NYRTDPDR-RAIAGHSMGGYGALYLALRHPDL----------FGAVIAFSGALDPS 153 (251)
T ss_dssp HSSEEECC-EEEEEETHHHHHHHHHHHHSTTT----------ESEEEEESEESETT
T ss_pred hcccccce-eEEeccCCCcHHHHHHHHhCccc----------cccccccCcccccc
Confidence 35433333 89999999999988888665443 89999999988775
No 149
>COG0627 Predicted esterase [General function prediction only]
Probab=72.67 E-value=6.7 Score=38.54 Aligned_cols=133 Identities=17% Similarity=0.176 Sum_probs=72.8
Q ss_pred CCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhH
Q 012276 69 EDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFK 148 (467)
Q Consensus 69 ~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~ 148 (467)
++--|+|+.+|..|.. =.+.+.++.+=..+. .+ -....++-.-+....++--|+ |+|.|.|+=.+...-.....
T Consensus 52 ~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~~-~g-~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~- 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNE--PNVYLLDGLRRQADE-SG-WAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG- 125 (316)
T ss_pred CCCCEEEEeCCCCCCC--CceEeccchhhhhhh-cC-eEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC-
Confidence 4455667777888884 122233332211110 00 001111133355556666677 79999997432211001110
Q ss_pred hHHHHHHHHH-----HHHHhCCCCCC-CCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 149 QVHHLDQFLR-----KWLMDHPEFIS-NPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 149 ~a~d~~~fL~-----~f~~~fp~~~~-~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
.-+++.||. .+.+.||.-++ ..-.|+|.|.||+=+-.+|.+-.++ ++.++--+|+++|.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~----------f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR----------FKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch----------hceecccccccccc
Confidence 233444443 34455663321 2689999999999988888766543 78888888888875
No 150
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=72.60 E-value=8.1 Score=40.99 Aligned_cols=113 Identities=25% Similarity=0.314 Sum_probs=63.2
Q ss_pred CCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCccccc----------ceeeecCCccccccCcc
Q 012276 68 KEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEA----------SILFVDSPVGTGFSYAR 137 (467)
Q Consensus 68 ~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~a----------nllfIDqPvGtGfSy~~ 137 (467)
+.-|++|..-||||. .++.|.++|.+.- =|++||.- |+-- ++.
T Consensus 640 kkYptvl~VYGGP~V-------------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~h-RGl 692 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGV-------------------------QLVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSAH-RGL 692 (867)
T ss_pred CCCceEEEEcCCCce-------------------------EEeeccccceehhhhhhhhhcceEEEEEcCC-Cccc-cch
Confidence 448999999999992 3556777776543 25889933 3210 000
Q ss_pred CCCC-C--ccChhHhHHHHHHHHHHHHHhCCCCCC-CCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCC
Q 012276 138 TPHA-S--QTGDFKQVHHLDQFLRKWLMDHPEFIS-NPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNP 213 (467)
Q Consensus 138 ~~~~-~--~~~~~~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng 213 (467)
.-.. + .-...++ +|=.+.||-.-++.- |.. ..+-|-|-||||....... .+. +.| ++-.|-|.|
T Consensus 693 kFE~~ik~kmGqVE~-eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLSlm~L---~~~------P~I-frvAIAGap 760 (867)
T KOG2281|consen 693 KFESHIKKKMGQVEV-EDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSLMGL---AQY------PNI-FRVAIAGAP 760 (867)
T ss_pred hhHHHHhhccCeeee-hhhHHHHHHHHHhcC-cccchheeEeccccccHHHHHHh---hcC------cce-eeEEeccCc
Confidence 0000 0 0011111 222445554444432 332 3589999999997644332 222 223 888899999
Q ss_pred ccCchh
Q 012276 214 RTDMVV 219 (467)
Q Consensus 214 ~i~p~~ 219 (467)
++++..
T Consensus 761 VT~W~~ 766 (867)
T KOG2281|consen 761 VTDWRL 766 (867)
T ss_pred ceeeee
Confidence 998863
No 151
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=72.45 E-value=5 Score=42.42 Aligned_cols=85 Identities=9% Similarity=-0.042 Sum_probs=50.7
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCC
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDI 199 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 199 (467)
..++-||-+ |-|.|.... .-++-+.+.+.++|..+.+.. ...+++++|.|.||..+...+........
T Consensus 221 f~V~~iDwr-gpg~s~~~~-----~~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~--- 288 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADK-----TFDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD--- 288 (532)
T ss_pred cEEEEEECC-CCCcccccC-----ChhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC---
Confidence 467778854 778764221 112233344666666665443 35689999999999987653322222210
Q ss_pred CcceeceeeEecCCccCch
Q 012276 200 KPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 200 ~~~inLkGi~igng~i~p~ 218 (467)
.-.++++++.+..+|..
T Consensus 289 --~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 --DKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCccceEEEEecCcCCC
Confidence 01288988888887764
No 152
>PRK10985 putative hydrolase; Provisional
Probab=72.37 E-value=8.2 Score=37.94 Aligned_cols=133 Identities=12% Similarity=0.088 Sum_probs=66.4
Q ss_pred EEeCCCCCeeEEEEEeecCCCCCCCCEEEEECCCCchHHH-hH-HHHhhcCeEEeccCCCCCCCccccCCCCccccccee
Q 012276 46 VGVGESEEAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAF-SG-LAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASIL 123 (467)
Q Consensus 46 l~v~~~~~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g-~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anll 123 (467)
+...+ +..+.+++.+....+..+|+||.++|.+|++.. +. .+. . .+... -.+++
T Consensus 36 ~~~~d--g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~---~-------------~l~~~------G~~v~ 91 (324)
T PRK10985 36 LELPD--GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLL---E-------------AAQKR------GWLGV 91 (324)
T ss_pred EECCC--CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHH---H-------------HHHHC------CCEEE
Confidence 44443 445544444333334568999999999997532 11 011 0 01111 13566
Q ss_pred eecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcce
Q 012276 124 FVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLI 203 (467)
Q Consensus 124 fIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~i 203 (467)
-+|.+ |.|=|-......+... ..+|+..+++..-+.++ ..+++++|+|.||..+-..+.+-.+ ..
T Consensus 92 ~~d~r-G~g~~~~~~~~~~~~~---~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~~~~--------~~ 156 (324)
T PRK10985 92 VMHFR-GCSGEPNRLHRIYHSG---ETEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAKEGD--------DL 156 (324)
T ss_pred EEeCC-CCCCCccCCcceECCC---chHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHhhCC--------CC
Confidence 67765 6664322111111111 13444444433223444 4589999999999875555443221 12
Q ss_pred eceeeEecCCccCc
Q 012276 204 NLQGYILGNPRTDM 217 (467)
Q Consensus 204 nLkGi~igng~i~p 217 (467)
.++++++.++-.+.
T Consensus 157 ~~~~~v~i~~p~~~ 170 (324)
T PRK10985 157 PLDAAVIVSAPLML 170 (324)
T ss_pred CccEEEEEcCCCCH
Confidence 26665555554443
No 153
>PRK04940 hypothetical protein; Provisional
Probab=70.59 E-value=12 Score=33.35 Aligned_cols=59 Identities=14% Similarity=-0.008 Sum_probs=38.1
Q ss_pred ChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCchh
Q 012276 145 GDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVV 219 (467)
Q Consensus 145 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~~ 219 (467)
...++...+.+.+.++... .. ..++.|+|-|-||.|+-.+|.+- .++.| +.||.+.|..
T Consensus 38 ~P~~a~~~l~~~i~~~~~~--~~-~~~~~liGSSLGGyyA~~La~~~------------g~~aV-LiNPAv~P~~ 96 (180)
T PRK04940 38 HPKHDMQHLLKEVDKMLQL--SD-DERPLICGVGLGGYWAERIGFLC------------GIRQV-IFNPNLFPEE 96 (180)
T ss_pred CHHHHHHHHHHHHHHhhhc--cC-CCCcEEEEeChHHHHHHHHHHHH------------CCCEE-EECCCCChHH
Confidence 3445544444444433211 11 24799999999999999999754 25554 5699999964
No 154
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=69.55 E-value=8.6 Score=39.38 Aligned_cols=57 Identities=9% Similarity=-0.048 Sum_probs=45.0
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
.++||+.+|..|.++|....+.+.+.. .+..++.+.++ |+ .++|+.+++.+.
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~-------------------------~~~~l~~i~~~-~~--~e~~~~~~~~i~ 406 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSS-------------------------ADGKLLEIPFK-PV--YRNFDKALQEIS 406 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhC-------------------------CCCeEEEccCC-Cc--cCCHHHHHHHHH
Confidence 579999999999999999988765542 23445777776 43 359999999999
Q ss_pred HHHcC
Q 012276 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
+||..
T Consensus 407 ~wL~~ 411 (414)
T PRK05077 407 DWLED 411 (414)
T ss_pred HHHHH
Confidence 99964
No 155
>PLN02761 lipase class 3 family protein
Probab=67.31 E-value=15 Score=38.28 Aligned_cols=70 Identities=11% Similarity=0.030 Sum_probs=48.5
Q ss_pred HhHHHHHHHHHHHHHhCCCC-C--CCCeEEEecccCCccHHHHHHHHHhcccc---CCCcceeceeeEecCCccCc
Q 012276 148 KQVHHLDQFLRKWLMDHPEF-I--SNPFYVGGDSYSGITVPALVQRISNENEE---DIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~-~--~~~~yi~GESYgG~yvP~la~~i~~~~~~---~~~~~inLkGi~igng~i~p 217 (467)
.+.+++...|+...+.+|.. + ...++|+|+|.||-.+-..|..|...+-. .....+++.-+..|.|-+..
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 56778899999988888532 1 23599999999999998888888653211 11234556667777766543
No 156
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=64.65 E-value=1.9 Score=42.66 Aligned_cols=70 Identities=13% Similarity=0.137 Sum_probs=46.7
Q ss_pred ccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHh
Q 012276 119 EASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISN 193 (467)
Q Consensus 119 ~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~ 193 (467)
..|||.||=-.+..-.|.. ...+...+++.+.+||+.....+ .+...+++|+|+|.|+|-+-.+++++..
T Consensus 104 d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 104 DYNVIVVDWSRGASNNYPQ----AVANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp -EEEEEEE-HHHHSS-HHH----HHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CceEEEEcchhhccccccc----hhhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 5799999954443322221 12456678888888888877432 2334589999999999999888888765
No 157
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=64.64 E-value=11 Score=34.89 Aligned_cols=50 Identities=12% Similarity=0.037 Sum_probs=38.2
Q ss_pred ChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhcc
Q 012276 145 GDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNEN 195 (467)
Q Consensus 145 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~ 195 (467)
+-+..++.+.+.|.+.++..+.- .+++-+.|+|.||.++-+....+.+.+
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 34567888888888877666543 458999999999999987777776654
No 158
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=64.13 E-value=12 Score=34.92 Aligned_cols=59 Identities=19% Similarity=0.259 Sum_probs=47.1
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
..+|.+++|+.|.+|...-...|-+.. .+.++ ..+...|||-+.+|.+.....|.
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t------------------------~~~f~-l~~fdGgHFfl~~~~~~v~~~i~ 230 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHT------------------------KGDFT-LRVFDGGHFFLNQQREEVLARLE 230 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhh------------------------cCCce-EEEecCcceehhhhHHHHHHHHH
Confidence 589999999999999988777776652 13455 45566799999999999999888
Q ss_pred HHHc
Q 012276 460 RWIN 463 (467)
Q Consensus 460 ~fl~ 463 (467)
+.+.
T Consensus 231 ~~l~ 234 (244)
T COG3208 231 QHLA 234 (244)
T ss_pred HHhh
Confidence 8874
No 159
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=64.04 E-value=11 Score=35.44 Aligned_cols=59 Identities=25% Similarity=0.358 Sum_probs=43.5
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
+.+|||++|..|-++|+.-..+..... .+.....+|+||||--..--|+- ++.++
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~------------------------k~~~epl~v~g~gH~~~~~~~~y-i~~l~ 246 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERC------------------------KEKVEPLWVKGAGHNDIELYPEY-IEHLR 246 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhc------------------------cccCCCcEEecCCCcccccCHHH-HHHHH
Confidence 469999999999999998766655542 23466689999999987766654 44455
Q ss_pred HHHc
Q 012276 460 RWIN 463 (467)
Q Consensus 460 ~fl~ 463 (467)
+|+.
T Consensus 247 ~f~~ 250 (258)
T KOG1552|consen 247 RFIS 250 (258)
T ss_pred HHHH
Confidence 5664
No 160
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=63.74 E-value=21 Score=33.90 Aligned_cols=103 Identities=18% Similarity=0.233 Sum_probs=68.5
Q ss_pred CEEEEECCCCchHHHh-HHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhHh
Q 012276 71 PLLLWLTGGPGCSAFS-GLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFKQ 149 (467)
Q Consensus 71 Pl~lWlnGGPG~SS~~-g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~ 149 (467)
|.+++++++=|.-..+ .+-.+++|- .-++-++.| |.|. ... ...+.++.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~------------------------~~v~~l~a~-g~~~--~~~---~~~~l~~~ 50 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL------------------------LPVYGLQAP-GYGA--GEQ---PFASLDDM 50 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC------------------------ceeeccccC-cccc--ccc---ccCCHHHH
Confidence 5688998887765433 344445442 224456656 4442 111 13566777
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccC
Q 012276 150 VHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (467)
Q Consensus 150 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~ 216 (467)
|+.-.+.|++ ..|+ + |.++.|.|+||.-+=.+|.++..+-+ -..-++|.+....
T Consensus 51 a~~yv~~Ir~---~QP~--G-Py~L~G~S~GG~vA~evA~qL~~~G~-------~Va~L~llD~~~~ 104 (257)
T COG3319 51 AAAYVAAIRR---VQPE--G-PYVLLGWSLGGAVAFEVAAQLEAQGE-------EVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHH---hCCC--C-CEEEEeeccccHHHHHHHHHHHhCCC-------eEEEEEEeccCCC
Confidence 7777777764 6775 3 99999999999999999999987631 2666777776655
No 161
>PRK14567 triosephosphate isomerase; Provisional
Probab=61.18 E-value=22 Score=33.65 Aligned_cols=60 Identities=18% Similarity=0.306 Sum_probs=44.8
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
+.++++..++++++..+-.-....+=|. |||---|.=+..|.+.. ++.|+.||.+-+++.
T Consensus 179 e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 179 EQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 5678899999999876421112233333 89999999999998864 399999999998874
No 162
>PLN02408 phospholipase A1
Probab=60.91 E-value=12 Score=37.31 Aligned_cols=46 Identities=9% Similarity=0.048 Sum_probs=37.6
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhc
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 194 (467)
.+.+++.+-|+.+++.+|.. ...++|+|||.||-.+-..|..|...
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHh
Confidence 46677888899988888864 23699999999999998888888654
No 163
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=60.67 E-value=17 Score=33.83 Aligned_cols=51 Identities=18% Similarity=0.143 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCC
Q 012276 153 LDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNP 213 (467)
Q Consensus 153 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng 213 (467)
..++++.....+++ +++|+|||=||..+-+.|..+.+..+ -.++.+..-||
T Consensus 71 A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~~~------~rI~~vy~fDg 121 (224)
T PF11187_consen 71 ALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDEIQ------DRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHHHh------hheeEEEEeeC
Confidence 34566666666653 69999999999999999887644321 12555555554
No 164
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=59.66 E-value=12 Score=33.79 Aligned_cols=58 Identities=19% Similarity=0.320 Sum_probs=40.3
Q ss_pred ccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHh
Q 012276 129 VGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISN 193 (467)
Q Consensus 129 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~ 193 (467)
-|||-|.++-+++ ..+.+-|....++++. ++|+-+ .+.++|-|+|+..+-.+|.+.-+
T Consensus 69 RgVG~S~G~fD~G--iGE~~Da~aaldW~~~---~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 69 RGVGRSQGEFDNG--IGELEDAAAALDWLQA---RHPDSA--SCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred cccccccCcccCC--cchHHHHHHHHHHHHh---hCCCch--hhhhcccchHHHHHHHHHHhccc
Confidence 3999998875543 3444445556777774 788643 37999999998777777766544
No 165
>PLN02310 triacylglycerol lipase
Probab=58.72 E-value=21 Score=36.22 Aligned_cols=64 Identities=14% Similarity=0.081 Sum_probs=43.9
Q ss_pred HhHHHHHHHHHHHHHhCCCC-CCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccC
Q 012276 148 KQVHHLDQFLRKWLMDHPEF-ISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~ 216 (467)
.+.+++.+.++...+.+++- ....+.|+|||.||-.+-..|..|.... +.+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCcc
Confidence 45566777788777766532 2346999999999999888887775432 2344666677777664
No 166
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=58.52 E-value=28 Score=32.16 Aligned_cols=58 Identities=21% Similarity=0.327 Sum_probs=42.6
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCc--HHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRP--AECYAM 457 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP--~~a~~m 457 (467)
.++.|-+-|+.|.+++..-++..++.- .+. -+...-.||+||.-.| +...+.
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~------------------------~~a--~vl~HpggH~VP~~~~~~~~i~~f 216 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESF------------------------KDA--TVLEHPGGHIVPNKAKYKEKIADF 216 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhc------------------------CCC--eEEecCCCccCCCchHHHHHHHHH
Confidence 578888899999999999888777762 222 4778899999998765 344555
Q ss_pred HHHHHc
Q 012276 458 FQRWIN 463 (467)
Q Consensus 458 i~~fl~ 463 (467)
|+.++.
T Consensus 217 i~~~~~ 222 (230)
T KOG2551|consen 217 IQSFLQ 222 (230)
T ss_pred HHHHHH
Confidence 555543
No 167
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=58.06 E-value=20 Score=35.21 Aligned_cols=59 Identities=15% Similarity=0.158 Sum_probs=43.5
Q ss_pred CCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCc
Q 012276 141 ASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (467)
Q Consensus 141 ~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~ 214 (467)
.++.++..+++.+.+|-.+=+ .|+..++.|.|.|-||.-+...|.. .-++|++++-.-+
T Consensus 286 P~p~n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~-----------YPdVkavvLDAtF 344 (517)
T KOG1553|consen 286 PYPVNTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN-----------YPDVKAVVLDATF 344 (517)
T ss_pred CCcccchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc-----------CCCceEEEeecch
Confidence 356788788777777766533 4557799999999999988887742 3458999886544
No 168
>PRK14566 triosephosphate isomerase; Provisional
Probab=57.91 E-value=26 Score=33.38 Aligned_cols=60 Identities=20% Similarity=0.416 Sum_probs=44.9
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
+.|+++..||++++...-.-....+=|. |||---|.=+..|.+.. ++.|+.||..-+++.
T Consensus 189 e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 189 EQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 4578899999999865421112233344 99999999999998864 399999999888874
No 169
>PLN02802 triacylglycerol lipase
Probab=57.28 E-value=23 Score=36.89 Aligned_cols=64 Identities=11% Similarity=0.080 Sum_probs=44.8
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccC
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~ 216 (467)
.+.+++.+-++.+++++|.-. ..++|+|||.||-.+-..|..|...... .+.+.-+..|.|-+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVG 372 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVG 372 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCcc
Confidence 456778888888888876432 3699999999999999888888664311 123455666665543
No 170
>PLN00413 triacylglycerol lipase
Probab=56.86 E-value=14 Score=38.06 Aligned_cols=39 Identities=15% Similarity=0.278 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHh
Q 012276 152 HLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISN 193 (467)
Q Consensus 152 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~ 193 (467)
++...|+++++.+|. .+++|+|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHh
Confidence 467778888888874 479999999999998888876653
No 171
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=55.79 E-value=15 Score=35.09 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=29.9
Q ss_pred hhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCcc
Q 012276 146 DFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGIT 183 (467)
Q Consensus 146 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 183 (467)
-.++|..|++.+..-....|+=..-++|++|||-|..=
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g 122 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYG 122 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccc
Confidence 44677888899988888888876556999999987543
No 172
>PF08194 DIM: DIM protein; InterPro: IPR013172 Drosophila immune-induced molecules (DIMs) are short proteins induced during the immune response of Drosophila []. This entry includes DIMs 1 to 4 and DIM23.
Probab=52.70 E-value=18 Score=22.94 Aligned_cols=20 Identities=40% Similarity=0.567 Sum_probs=13.8
Q ss_pred CcchhhHHHHHHHHHHhhcc
Q 012276 1 MEMAKLCFSLLLLLQLCMQP 20 (467)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (467)
||++.+.|.+++|+++.+.+
T Consensus 1 Mk~l~~a~~l~lLal~~a~~ 20 (36)
T PF08194_consen 1 MKCLSLAFALLLLALAAAVP 20 (36)
T ss_pred CceeHHHHHHHHHHHHhccc
Confidence 78888877777766555543
No 173
>PLN02162 triacylglycerol lipase
Probab=51.99 E-value=18 Score=37.21 Aligned_cols=40 Identities=18% Similarity=0.235 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHh
Q 012276 151 HHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISN 193 (467)
Q Consensus 151 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~ 193 (467)
..+.+.|+.++.++|. .+++++|||.||-.+-..|..+..
T Consensus 262 ~~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 262 YTIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHH
Confidence 3455667777777774 479999999999998877766644
No 174
>PLN02934 triacylglycerol lipase
Probab=51.94 E-value=21 Score=37.22 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhc
Q 012276 151 HHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (467)
Q Consensus 151 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 194 (467)
.++...|+++++.+|. .+++++|||-||-.+-..|..+...
T Consensus 305 ~~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHHh
Confidence 3477788888888885 4799999999999988888766543
No 175
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=50.85 E-value=9.5 Score=24.19 Aligned_cols=12 Identities=33% Similarity=1.027 Sum_probs=6.4
Q ss_pred CCEEEEECCCCc
Q 012276 70 DPLLLWLTGGPG 81 (467)
Q Consensus 70 ~Pl~lWlnGGPG 81 (467)
.--+|||+|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 345899999998
No 176
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=50.06 E-value=54 Score=34.02 Aligned_cols=44 Identities=16% Similarity=0.184 Sum_probs=33.7
Q ss_pred ChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHH
Q 012276 145 GDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALV 188 (467)
Q Consensus 145 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la 188 (467)
+.+|+=.|+.+|++.-=.+|+.-.+.|++.+|-||.|..+.=+-
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R 190 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFR 190 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHH
Confidence 56688889999988876778765555999999999986654443
No 177
>PRK11071 esterase YqiA; Provisional
Probab=49.62 E-value=27 Score=31.32 Aligned_cols=79 Identities=19% Similarity=0.254 Sum_probs=47.8
Q ss_pred CEEEEECCCCchHHHhH--HHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccChhH
Q 012276 71 PLLLWLTGGPGCSAFSG--LAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTGDFK 148 (467)
Q Consensus 71 Pl~lWlnGGPG~SS~~g--~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~ 148 (467)
|.||+|+|-+|++..+- .+.+. +..+- ....++.+|-| |.| ++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~----------------l~~~~----~~~~v~~~dl~-g~~--------------~~ 46 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNW----------------LAQHH----PDIEMIVPQLP-PYP--------------AD 46 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHH----------------HHHhC----CCCeEEeCCCC-CCH--------------HH
Confidence 67999999988776542 12111 00000 01356778877 321 13
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHH
Q 012276 149 QVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRI 191 (467)
Q Consensus 149 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i 191 (467)
.+ +++.++.+... .++++|.|.|.||.++-.+|.+.
T Consensus 47 ~~----~~l~~l~~~~~---~~~~~lvG~S~Gg~~a~~~a~~~ 82 (190)
T PRK11071 47 AA----ELLESLVLEHG---GDPLGLVGSSLGGYYATWLSQCF 82 (190)
T ss_pred HH----HHHHHHHHHcC---CCCeEEEEECHHHHHHHHHHHHc
Confidence 33 44455554432 45899999999999998888653
No 178
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=49.12 E-value=11 Score=34.67 Aligned_cols=46 Identities=22% Similarity=0.307 Sum_probs=35.8
Q ss_pred HHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCc
Q 012276 158 RKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (467)
Q Consensus 158 ~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~ 214 (467)
.+|+..+|+...+.+-|.|-|.||-.+-.+|.+.. .++.++..||-
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-----------~i~avVa~~ps 55 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-----------QISAVVAISPS 55 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-----------SEEEEEEES--
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-----------CccEEEEeCCc
Confidence 35677899998889999999999999999998774 28888888765
No 179
>PLN02847 triacylglycerol lipase
Probab=48.51 E-value=34 Score=36.40 Aligned_cols=62 Identities=18% Similarity=0.143 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecC-CccCch
Q 012276 149 QVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGN-PRTDMV 218 (467)
Q Consensus 149 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ign-g~i~p~ 218 (467)
+.+.+...|++-+..+|.| ++.|+|||.||--+..++..+.++.. .-++..+..|- |++++.
T Consensus 233 I~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~-----fssi~CyAFgPp~cvS~e 295 (633)
T PLN02847 233 IAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE-----FSSTTCVTFAPAACMTWD 295 (633)
T ss_pred HHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC-----CCCceEEEecCchhcCHH
Confidence 3334444555556667755 69999999999988888765543221 23456666665 355554
No 180
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=47.83 E-value=26 Score=31.87 Aligned_cols=102 Identities=25% Similarity=0.227 Sum_probs=63.2
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCcccc
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtG 132 (467)
+..|.|--+- .-.--||.+-|-=||+--. .+|-..+ .++ -....||=+| |.|-|
T Consensus 30 g~ql~y~~~G-----~G~~~iLlipGalGs~~tD-----f~pql~~------------l~k---~l~~TivawD-PpGYG 83 (277)
T KOG2984|consen 30 GTQLGYCKYG-----HGPNYILLIPGALGSYKTD-----FPPQLLS------------LFK---PLQVTIVAWD-PPGYG 83 (277)
T ss_pred CceeeeeecC-----CCCceeEeccccccccccc-----CCHHHHh------------cCC---CCceEEEEEC-CCCCC
Confidence 5678886322 2234578888888887542 2222211 111 1126799999 55999
Q ss_pred ccCccCCCC---CccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHH
Q 012276 133 FSYARTPHA---SQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQR 190 (467)
Q Consensus 133 fSy~~~~~~---~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~ 190 (467)
-|...+..- ....|.+.|-|+.++|+ -.+|-|.|-|=||.-+-..|.+
T Consensus 84 ~SrPP~Rkf~~~ff~~Da~~avdLM~aLk----------~~~fsvlGWSdGgiTalivAak 134 (277)
T KOG2984|consen 84 TSRPPERKFEVQFFMKDAEYAVDLMEALK----------LEPFSVLGWSDGGITALIVAAK 134 (277)
T ss_pred CCCCCcccchHHHHHHhHHHHHHHHHHhC----------CCCeeEeeecCCCeEEEEeecc
Confidence 998654321 12466677777777763 2489999999999876555543
No 181
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=47.68 E-value=18 Score=24.16 Aligned_cols=33 Identities=18% Similarity=0.082 Sum_probs=24.4
Q ss_pred CCccCchhhccchhhhhhhcCCCCHHHHHHHHH
Q 012276 212 NPRTDMVVEQNSQIPFAHGMGLISNELYESLKI 244 (467)
Q Consensus 212 ng~i~p~~~~~~~~~~a~~~gli~~~~~~~~~~ 244 (467)
.|++||..-..--.+-|+..|+||++....+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 477888876666677889999999987766543
No 182
>PLN02429 triosephosphate isomerase
Probab=47.53 E-value=45 Score=32.65 Aligned_cols=60 Identities=17% Similarity=0.349 Sum_probs=44.3
Q ss_pred HhHHHHHHHHHHHHHh-CCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 148 KQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
+.++.+.+++++++.. +.+-....+-|. |||---|.=+..+.... ++.|+.||.+.+++.
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~~--------diDG~LVGgASL~~~ 299 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKEE--------DIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcCC--------CCCEEEeecceecHH
Confidence 4567789999998864 432222344444 89999999999887753 499999999998764
No 183
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=47.14 E-value=15 Score=33.61 Aligned_cols=49 Identities=20% Similarity=0.323 Sum_probs=32.5
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAE 453 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~ 453 (467)
.+++|-..|..|.+++...++...+.. ... +-+.....||.||...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~------------------------~~~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMF------------------------DPD-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHH------------------------HHH-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhc------------------------cCC-cEEEEECCCCcCcCChhhc
Confidence 589999999999999988887777663 233 6688899999999987653
No 184
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=47.12 E-value=41 Score=31.58 Aligned_cols=61 Identities=18% Similarity=0.357 Sum_probs=47.5
Q ss_pred CeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcH---HHHHH
Q 012276 381 YRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPA---ECYAM 457 (467)
Q Consensus 381 irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~---~a~~m 457 (467)
.++|+.+|..|.+++....+....... +.+.....+.+++|....+.+. .++.-
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 289 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR-----------------------ERPKKLLFVPGGGHIDLYDNPPAVEQALDK 289 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc-----------------------cCCceEEEecCCccccccCccHHHHHHHHH
Confidence 799999999999999887777666531 1257778999999999987666 57777
Q ss_pred HHHHHcC
Q 012276 458 FQRWINH 464 (467)
Q Consensus 458 i~~fl~~ 464 (467)
+.+|+..
T Consensus 290 ~~~f~~~ 296 (299)
T COG1073 290 LAEFLER 296 (299)
T ss_pred HHHHHHH
Confidence 7777754
No 185
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=46.79 E-value=37 Score=33.68 Aligned_cols=58 Identities=22% Similarity=0.347 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 152 HLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 152 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
.+.+-++.....+| +..++++|+|-||-++...|..|...... ....++=+--|-|-+
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCc
Confidence 35555555566777 45799999999999999999999887521 123455555565544
No 186
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=46.75 E-value=1.1e+02 Score=32.37 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=25.1
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHH
Q 012276 154 DQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALV 188 (467)
Q Consensus 154 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la 188 (467)
.+|+++.+..|-. -.+++-|+|+|.||..|-.+.
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 5777777777752 235799999999998885544
No 187
>PLN03037 lipase class 3 family protein; Provisional
Probab=46.12 E-value=41 Score=35.19 Aligned_cols=64 Identities=13% Similarity=0.126 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHhCCCC-CCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccC
Q 012276 149 QVHHLDQFLRKWLMDHPEF-ISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (467)
Q Consensus 149 ~a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~ 216 (467)
+.+++..-++..++.+++. ....++|+|||.||-.+-..|..|...... ..++.-+..|.|-+.
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~----~~~VtvyTFGsPRVG 360 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA----LSNISVISFGAPRVG 360 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC----CCCeeEEEecCCCcc
Confidence 4456777777777777643 234699999999999998888777654210 013444555555443
No 188
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=45.44 E-value=42 Score=31.34 Aligned_cols=65 Identities=23% Similarity=0.195 Sum_probs=39.1
Q ss_pred cceeeecCCccccccCccCCCCCccC-hhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHH
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTG-DFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALV 188 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~-~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la 188 (467)
..||-.|-- |.|=|.....+..... .+=+..||-..|..-=..-| ..|.|..|+||||+-+=.++
T Consensus 58 f~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~ 123 (281)
T COG4757 58 FEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLG 123 (281)
T ss_pred ceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeecccc
Confidence 577778844 9998886654432221 11233445444443323334 67999999999998654444
No 189
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=44.86 E-value=25 Score=31.17 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=33.4
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 154 DQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 154 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
-++++.+-+..... ..+.+|+|+|.|+.-+-..+. ... ..+++|+++..|+-
T Consensus 40 ~~W~~~l~~~i~~~-~~~~ilVaHSLGc~~~l~~l~--~~~-------~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 40 DEWVQALDQAIDAI-DEPTILVAHSLGCLTALRWLA--EQS-------QKKVAGALLVAPFD 91 (171)
T ss_dssp HHHHHHHHHCCHC--TTTEEEEEETHHHHHHHHHHH--HTC-------CSSEEEEEEES--S
T ss_pred HHHHHHHHHHHhhc-CCCeEEEEeCHHHHHHHHHHh--hcc-------cccccEEEEEcCCC
Confidence 34554444444444 458999999999987766665 222 34599999999994
No 190
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=44.85 E-value=15 Score=19.33 Aligned_cols=15 Identities=40% Similarity=0.598 Sum_probs=8.4
Q ss_pred chhhHHHHHHHHHHh
Q 012276 3 MAKLCFSLLLLLQLC 17 (467)
Q Consensus 3 ~~~~~~~~~~~~~~~ 17 (467)
|.|.+|.+++|++++
T Consensus 1 MMk~vIIlvvLLliS 15 (19)
T PF13956_consen 1 MMKLVIILVVLLLIS 15 (19)
T ss_pred CceehHHHHHHHhcc
Confidence 445566666655554
No 191
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=44.76 E-value=1e+02 Score=32.79 Aligned_cols=49 Identities=16% Similarity=0.139 Sum_probs=38.7
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAE 453 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~ 453 (467)
.+++|+..|..|.++|+..++...+.+. +-...++.++||+++.++|..
T Consensus 415 ~vPvLvV~G~~D~IvP~~sa~~l~~~i~-------------------------~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 415 KVPVYIIATREDHIAPWQSAYRGAALLG-------------------------GPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCCEEEEeeCCCCcCCHHHHHHHHHHCC-------------------------CCEEEEECCCCCchHhhCCCC
Confidence 5899999999999999998887766642 122346789999998888753
No 192
>PLN02442 S-formylglutathione hydrolase
Probab=44.67 E-value=31 Score=33.15 Aligned_cols=48 Identities=17% Similarity=0.086 Sum_probs=36.0
Q ss_pred cCCeEEEEeCCCccccCch-hHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCC
Q 012276 379 KGYRSLIYSGDHDMLIPFL-GTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAP 447 (467)
Q Consensus 379 ~~irVLiy~Gd~D~i~n~~-Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP 447 (467)
.+.+|++.+|+.|..|+.. .++.+.+.++ . .+.+.++....|++|-..
T Consensus 216 ~~~pvli~~G~~D~~v~~~~~s~~~~~~l~---------------~------~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 216 VSATILIDQGEADKFLKEQLLPENFEEACK---------------E------AGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred cCCCEEEEECCCCccccccccHHHHHHHHH---------------H------cCCCeEEEEeCCCCccHH
Confidence 4689999999999999974 4666666652 1 124578899999999755
No 193
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=43.39 E-value=13 Score=33.31 Aligned_cols=16 Identities=31% Similarity=0.916 Sum_probs=13.4
Q ss_pred CCCCEEEEECCCCchH
Q 012276 68 KEDPLLLWLTGGPGCS 83 (467)
Q Consensus 68 ~~~Pl~lWlnGGPG~S 83 (467)
.+.|-|||.=|||||-
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 3568899999999975
No 194
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=43.23 E-value=42 Score=31.89 Aligned_cols=64 Identities=19% Similarity=0.259 Sum_probs=39.0
Q ss_pred ChhHhHHHHHHHHHHHHH-hC-----CCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 145 GDFKQVHHLDQFLRKWLM-DH-----PEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 145 ~~~~~a~d~~~fL~~f~~-~f-----p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
.+.+.+..+.+||.+=++ .. |.+ ..+.|+|||=||+-+-.++....+. ...+++++++..+|+=
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~~~~~-----~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALGNASS-----SLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhhhccc-----ccccceeEEEEecccc
Confidence 344556666666654221 12 222 2599999999999555444433211 1246799999999885
No 195
>PRK07868 acyl-CoA synthetase; Validated
Probab=43.03 E-value=79 Score=36.46 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=26.6
Q ss_pred CCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccC
Q 012276 169 SNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTD 216 (467)
Q Consensus 169 ~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~ 216 (467)
..++++.|.|.||..+-.+|..-... .++++++.+.-+|
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~~~~~---------~v~~lvl~~~~~d 178 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAYRRSK---------DIASIVTFGSPVD 178 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHhcCCC---------ccceEEEEecccc
Confidence 34799999999999987777531111 2677776555544
No 196
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=42.46 E-value=14 Score=37.33 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=23.2
Q ss_pred CeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 171 PFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 171 ~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
.+.++|+||||--+-..+.+- . .++..++.+||+-|.
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d---~--------r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD---T--------RFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH----T--------T--EEEEES---TTS
T ss_pred heeeeecCchHHHHHHHHhhc---c--------CcceEEEeCCcccCC
Confidence 589999999997665444322 1 288999999999885
No 197
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=42.17 E-value=21 Score=36.28 Aligned_cols=41 Identities=10% Similarity=0.077 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHH
Q 012276 152 HLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRIS 192 (467)
Q Consensus 152 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~ 192 (467)
+.+.-|++.++.--+..++++.|.|||+||.++-++-....
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhcc
Confidence 34444555443321223679999999999999888877664
No 198
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=42.10 E-value=42 Score=29.94 Aligned_cols=65 Identities=20% Similarity=0.150 Sum_probs=38.9
Q ss_pred cccceeeecCCcc--ccccCccCCCCCccChhHhHHHHHHHHHHHHHhC-CCCCCCCeEEEecccCCccHHHHHHH
Q 012276 118 KEASILFVDSPVG--TGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDH-PEFISNPFYVGGDSYSGITVPALVQR 190 (467)
Q Consensus 118 ~~anllfIDqPvG--tGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~f-p~~~~~~~yi~GESYgG~yvP~la~~ 190 (467)
+.|-|.|++-... ...+-..+ .--++.|.+|.+|+..+=..+ | ...+-+.|||||..-+-.-+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~~-----~~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAASP-----GYARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccccCc-----hHHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 6678888754433 22221111 112356777777777765445 2 3468999999999776555543
No 199
>PRK07868 acyl-CoA synthetase; Validated
Probab=41.45 E-value=39 Score=38.93 Aligned_cols=60 Identities=10% Similarity=0.187 Sum_probs=46.1
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEE-EEEcCCcccC---CCCCcHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTY-ATVKGGGHTA---PEYRPAECY 455 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf-~~V~~AGHmv---P~DqP~~a~ 455 (467)
..++|+..|..|.++|....+.+.+.+ .+..+ ..+.++|||- -.--|+...
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i-------------------------~~a~~~~~~~~~GH~g~~~g~~a~~~~w 351 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAA-------------------------PNAEVYESLIRAGHFGLVVGSRAAQQTW 351 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC-------------------------CCCeEEEEeCCCCCEeeeechhhhhhhC
Confidence 589999999999999999888887664 22333 4668999994 455677777
Q ss_pred HHHHHHHcC
Q 012276 456 AMFQRWINH 464 (467)
Q Consensus 456 ~mi~~fl~~ 464 (467)
..+.+||..
T Consensus 352 p~i~~wl~~ 360 (994)
T PRK07868 352 PTVADWVKW 360 (994)
T ss_pred hHHHHHHHH
Confidence 888888863
No 200
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=40.32 E-value=56 Score=21.07 Aligned_cols=28 Identities=18% Similarity=0.336 Sum_probs=14.5
Q ss_pred eeEEEEEeecCCCCCCCCEEEEECCCCc
Q 012276 54 AQLFYYFVKSDKNPKEDPLLLWLTGGPG 81 (467)
Q Consensus 54 ~~lFy~f~es~~~~~~~Pl~lWlnGGPG 81 (467)
.+-+|||..+........--+|..+||+
T Consensus 11 ~NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 11 GNRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred CceEEEEecccccCCCCCceEEEEeCCC
Confidence 4456677444433333445555566664
No 201
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=39.12 E-value=38 Score=31.06 Aligned_cols=48 Identities=25% Similarity=0.353 Sum_probs=28.0
Q ss_pred CCeEEEEeCCCccccCchhH-HHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccC
Q 012276 380 GYRSLIYSGDHDMLIPFLGT-EAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTA 446 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt-~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmv 446 (467)
+.+||+.+|..|.+-|..-. +..++.|+= .|. ..+++.+...+|||+.
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~---------------~~~----~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKA---------------AGF----PHNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHC---------------TT---------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHH---------------hCC----CCcceEEEcCCCCcee
Confidence 68999999999999987754 445566631 111 1257888889999996
No 202
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=36.26 E-value=54 Score=30.44 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=26.5
Q ss_pred HhHHHHHHHHHHHHHhC--CCCCCCCeEEEecccCCccHHHHH
Q 012276 148 KQVHHLDQFLRKWLMDH--PEFISNPFYVGGDSYSGITVPALV 188 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~f--p~~~~~~~yi~GESYgG~yvP~la 188 (467)
+.++.+.+.++...+.+ ..-..+++.|.|+|.||.-+-.+.
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l 103 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSAL 103 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHH
Confidence 44566666666666554 122356899999999996444333
No 203
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=36.12 E-value=3.1e+02 Score=26.14 Aligned_cols=55 Identities=18% Similarity=0.168 Sum_probs=31.8
Q ss_pred HHHHHHHHHH----HHHh-CCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCcc
Q 012276 150 VHHLDQFLRK----WLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRT 215 (467)
Q Consensus 150 a~d~~~fL~~----f~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i 215 (467)
|+.+.+||.+ |++. ++ ....+-.|+|+||||..+-. .++++.. -+.-+++.+|-+
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~-~~~~~~~i~GhSlGGLfvl~---aLL~~p~-------~F~~y~~~SPSl 172 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYR-TNSERTAIIGHSLGGLFVLF---ALLTYPD-------CFGRYGLISPSL 172 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccc-cCcccceeeeecchhHHHHH---HHhcCcc-------hhceeeeecchh
Confidence 3445566544 5544 32 23446999999999987654 3444421 156666666544
No 204
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=36.09 E-value=1e+02 Score=28.97 Aligned_cols=59 Identities=19% Similarity=0.388 Sum_probs=43.8
Q ss_pred HhHHHHHHHHHHHHHh-CCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 148 KQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
+.+.+..+++++++.. +.+ ....+-|. |||---|.=+..+.+.. ++.|+.+|.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCHH
Confidence 4467789999998864 433 23344444 99999999998888763 389999999998763
No 205
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=35.72 E-value=57 Score=28.84 Aligned_cols=43 Identities=23% Similarity=0.476 Sum_probs=33.6
Q ss_pred CeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCC
Q 012276 381 YRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEY 449 (467)
Q Consensus 381 irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~D 449 (467)
++.+++.++.|..|++.-++.+.+.++ ..++.+.++||+-..+
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~--------------------------a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG--------------------------AELIILGGGGHFNAAS 157 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT---------------------------EEEEETS-TTSSGGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC--------------------------CCeEECCCCCCccccc
Confidence 566999999999999999999988863 4568999999997653
No 206
>PF08048 RepA1_leader: Tap RepA1 leader peptide; InterPro: IPR012605 This entry represents of the RepA1 leader peptide known as Tap found in IncFII plasmids. The frequency of replication of IncFII plasmid NR1 during the cell division cycle is regulated by the control of the synthesis of the plasmid-specific replication initiation protein (RepA1). When RepA1 is synthesised, it binds to the plasmid replication origin (ori) and effects the assembly of a replication complex composed of host proteins that mediate the replication of the plasmid [, ]. The tap gene encodes a 24-amino acid peptide whose translation is required for the translation of repA.
Probab=35.40 E-value=51 Score=18.69 Aligned_cols=20 Identities=30% Similarity=0.434 Sum_probs=10.8
Q ss_pred chhhH-HHHHH-HHHHhhccCC
Q 012276 3 MAKLC-FSLLL-LLQLCMQPAA 22 (467)
Q Consensus 3 ~~~~~-~~~~~-~~~~~~~~~~ 22 (467)
|+|.+ -+||| +++.|-.++.
T Consensus 1 MlrK~Q~~FLc~lLL~CniSAg 22 (25)
T PF08048_consen 1 MLRKVQYLFLCHLLLPCNISAG 22 (25)
T ss_pred CchhHHHHHHHHHHhhhhcccc
Confidence 34444 56777 4454655554
No 207
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=34.68 E-value=72 Score=31.44 Aligned_cols=120 Identities=17% Similarity=0.193 Sum_probs=64.2
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHH------HhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeec
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSA------FSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVD 126 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS------~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfID 126 (467)
+--.+.|.-. . .....|+++-++|==|.|. +...+.+-| + .++-.+
T Consensus 60 ~~~~ldw~~~-p-~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg-~-------------------------~~Vv~~ 111 (345)
T COG0429 60 GFIDLDWSED-P-RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG-W-------------------------LVVVFH 111 (345)
T ss_pred CEEEEeeccC-c-cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC-C-------------------------eEEEEe
Confidence 4455667532 1 2234599999999887773 122333333 2 233333
Q ss_pred CCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceece
Q 012276 127 SPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQ 206 (467)
Q Consensus 127 qPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLk 206 (467)
=-|.|.+-.....-+...+. +|+..||..--..+| .+++|.+|-|.||. .+|..+.++- ....+ ..
T Consensus 112 -~Rgcs~~~n~~p~~yh~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg---~d~~~-~a 177 (345)
T COG0429 112 -FRGCSGEANTSPRLYHSGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEG---DDLPL-DA 177 (345)
T ss_pred -cccccCCcccCcceecccch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhc---cCccc-ce
Confidence 23555443322222221221 344444444334566 68999999999994 3555555542 22222 67
Q ss_pred eeEecCCc
Q 012276 207 GYILGNPR 214 (467)
Q Consensus 207 Gi~igng~ 214 (467)
++++-+|+
T Consensus 178 a~~vs~P~ 185 (345)
T COG0429 178 AVAVSAPF 185 (345)
T ss_pred eeeeeCHH
Confidence 77777776
No 208
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=34.66 E-value=86 Score=28.87 Aligned_cols=48 Identities=10% Similarity=-0.018 Sum_probs=33.1
Q ss_pred cChhHhHHHHHHHHHHHHHhCCCCC-CCCeEEEecccCCccHHHHHHHHHhc
Q 012276 144 TGDFKQVHHLDQFLRKWLMDHPEFI-SNPFYVGGDSYSGITVPALVQRISNE 194 (467)
Q Consensus 144 ~~~~~~a~d~~~fL~~f~~~fp~~~-~~~~yi~GESYgG~yvP~la~~i~~~ 194 (467)
++|+.+++-+.+.+.+.+..-++-. ..++.-+| ||||+|.+...+++.
T Consensus 104 W~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 104 WNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp HT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred hCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 5677888999999999887665432 14566667 999999999888764
No 209
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=34.38 E-value=67 Score=28.23 Aligned_cols=28 Identities=18% Similarity=0.465 Sum_probs=23.5
Q ss_pred CCCCCCeEEEecccCCccHHHHHHHHHh
Q 012276 166 EFISNPFYVGGDSYSGITVPALVQRISN 193 (467)
Q Consensus 166 ~~~~~~~yi~GESYgG~yvP~la~~i~~ 193 (467)
.+..-|+.|-|.||||+....+|..+..
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcC
Confidence 4555699999999999999999987754
No 210
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=34.04 E-value=33 Score=28.78 Aligned_cols=17 Identities=29% Similarity=0.479 Sum_probs=14.7
Q ss_pred CCCCCEEEEECCCCchH
Q 012276 67 PKEDPLLLWLTGGPGCS 83 (467)
Q Consensus 67 ~~~~Pl~lWlnGGPG~S 83 (467)
..++||||-|+|.||+-
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 45689999999999975
No 211
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=33.94 E-value=66 Score=31.48 Aligned_cols=90 Identities=19% Similarity=0.111 Sum_probs=55.9
Q ss_pred cCCCCCCCCEEEEECCCCchHHHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCC
Q 012276 63 SDKNPKEDPLLLWLTGGPGCSAFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHAS 142 (467)
Q Consensus 63 s~~~~~~~Pl~lWlnGGPG~SS~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~ 142 (467)
+..+....|-++-++|==|.-=.+.-+.=+ +. .++. +.+.=||.= -.|+|.-..
T Consensus 45 ~~~~~~~~Pp~i~lHGl~GS~~Nw~sv~k~----Ls--------~~l~---------~~v~~vd~R-nHG~Sp~~~---- 98 (315)
T KOG2382|consen 45 SSENLERAPPAIILHGLLGSKENWRSVAKN----LS--------RKLG---------RDVYAVDVR-NHGSSPKIT---- 98 (315)
T ss_pred cccccCCCCceEEecccccCCCCHHHHHHH----hc--------cccc---------CceEEEecc-cCCCCcccc----
Confidence 345667889999999866643222222200 00 0111 267777754 778775432
Q ss_pred ccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCC
Q 012276 143 QTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSG 181 (467)
Q Consensus 143 ~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG 181 (467)
..+-+.+|+|+..||..+-. .++..+..|.|+|.||
T Consensus 99 ~h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 99 VHNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred ccCHHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 35667888988888876532 2345689999999999
No 212
>COG3896 Chloramphenicol 3-O-phosphotransferase [Defense mechanisms]
Probab=33.41 E-value=39 Score=29.58 Aligned_cols=27 Identities=22% Similarity=0.347 Sum_probs=21.3
Q ss_pred CCEEEEECCCC--chHHHhHHHHhh--cCeE
Q 012276 70 DPLLLWLTGGP--GCSAFSGLAYEI--GPVN 96 (467)
Q Consensus 70 ~Pl~lWlnGGP--G~SS~~g~~~E~--GP~~ 96 (467)
.--|+.||||| |-||+.-.|+|+ ||+.
T Consensus 22 ~griVlLNG~~saGKSSiA~A~Q~~~a~pwm 52 (205)
T COG3896 22 EGRIVLLNGGSSAGKSSIALAFQDLAAEPWM 52 (205)
T ss_pred CceEEEecCCCccchhHHHHHHHHHhhcchh
Confidence 34578899999 889999999985 5654
No 213
>PLN02561 triosephosphate isomerase
Probab=33.25 E-value=96 Score=29.41 Aligned_cols=59 Identities=19% Similarity=0.381 Sum_probs=43.6
Q ss_pred HhHHHHHHHHHHHHHh-CCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCc
Q 012276 148 KQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p 217 (467)
+.++++.+++++++.. +..-....+-|. |||---|.=+..+.... ++.|+.||.+-+++
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~~--------~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQP--------DVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcCC--------CCCeEEEehHhhHH
Confidence 4567788999998853 432223344444 89999999999987753 49999999999886
No 214
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=33.24 E-value=49 Score=29.40 Aligned_cols=36 Identities=22% Similarity=0.322 Sum_probs=29.2
Q ss_pred CCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCc
Q 012276 169 SNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (467)
Q Consensus 169 ~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~ 214 (467)
.+|.||+++|-|+.-+...+.++.. .+.|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~----------~V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR----------QVAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh----------ccceEEEecCC
Confidence 5689999999999777777766654 28999998875
No 215
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=33.00 E-value=83 Score=29.21 Aligned_cols=72 Identities=22% Similarity=0.361 Sum_probs=47.6
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEE-cCCcccCCCCCc--HHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATV-KGGGHTAPEYRP--AECYA 456 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V-~~AGHmvP~DqP--~~a~~ 456 (467)
..+||+..|..|-.||.....+|=++++=.. .+.-|+++|++ .+.-.+ +.+=---|.|++ +.|++
T Consensus 164 k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~-----------~~~~~v~~f~g-~~HGf~~~r~~~~~Ped~~~~eea~~ 231 (242)
T KOG3043|consen 164 KAPILFLFAELDEDVPPKDVKAWEEKLKENP-----------AVGSQVKTFSG-VGHGFVARRANISSPEDKKAAEEAYQ 231 (242)
T ss_pred CCCEEEEeecccccCCHHHHHHHHHHHhcCc-----------ccceeEEEcCC-ccchhhhhccCCCChhHHHHHHHHHH
Confidence 5899999999999999999999988874111 12234556633 222222 233333577766 67888
Q ss_pred HHHHHHc
Q 012276 457 MFQRWIN 463 (467)
Q Consensus 457 mi~~fl~ 463 (467)
.+..|++
T Consensus 232 ~~~~Wf~ 238 (242)
T KOG3043|consen 232 RFISWFK 238 (242)
T ss_pred HHHHHHH
Confidence 8888875
No 216
>PF03283 PAE: Pectinacetylesterase
Probab=32.00 E-value=2.5e+02 Score=28.19 Aligned_cols=153 Identities=14% Similarity=0.128 Sum_probs=74.6
Q ss_pred CeeEEEEEeecCCCCCCCCEEEEECCCCchHHHhH----HHHhhcCeEEeccCC--CCC-CCccccCCCCcccccceeee
Q 012276 53 EAQLFYYFVKSDKNPKEDPLLLWLTGGPGCSAFSG----LAYEIGPVNFNTVEY--NGS-LPTLRLNPYSWTKEASILFV 125 (467)
Q Consensus 53 ~~~lFy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g----~~~E~GP~~~~~~~~--~~~-~~~l~~N~~sW~~~anllfI 125 (467)
|+.-.|++-+.. ....+-+||.|.||=-|.+..- ...++|-..--+... .|- ...-..||.=++ .|+|||
T Consensus 34 GS~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~v 110 (361)
T PF03283_consen 34 GSPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFV 110 (361)
T ss_pred CCCCcEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEE
Confidence 343445554432 3456799999999988887521 122344322111100 010 012345773333 677787
Q ss_pred cCCccccccCccCCCCCcc---ChhHhHHHHHHHHHHHH-Hh-CCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCC
Q 012276 126 DSPVGTGFSYARTPHASQT---GDFKQVHHLDQFLRKWL-MD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIK 200 (467)
Q Consensus 126 DqPvGtGfSy~~~~~~~~~---~~~~~a~d~~~fL~~f~-~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~ 200 (467)
= -=+|=++.-+...... +..-....+++++.+++ .. +++ ...+.|+|.|-||.=+..-+.++.+.-..
T Consensus 111 p--YC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~--- 183 (361)
T PF03283_consen 111 P--YCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS--- 183 (361)
T ss_pred E--ecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc---
Confidence 3 3334333221110000 11112222344444433 44 443 34799999999998877777777665210
Q ss_pred cceeceeeEecCCccC
Q 012276 201 PLINLQGYILGNPRTD 216 (467)
Q Consensus 201 ~~inLkGi~igng~i~ 216 (467)
...++++.=..-++|
T Consensus 184 -~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 184 -SVKVKCLSDSGFFLD 198 (361)
T ss_pred -CceEEEecccccccc
Confidence 234555544444444
No 217
>COG4425 Predicted membrane protein [Function unknown]
Probab=31.92 E-value=64 Score=33.00 Aligned_cols=37 Identities=14% Similarity=0.229 Sum_probs=30.6
Q ss_pred hhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCc
Q 012276 146 DFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGI 182 (467)
Q Consensus 146 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 182 (467)
-.++|+.+.++.-.+.+.-|+=..-++|+.|||-|..
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 3467888999999999999987666799999998753
No 218
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.40 E-value=65 Score=35.44 Aligned_cols=96 Identities=23% Similarity=0.368 Sum_probs=57.3
Q ss_pred EEEECCCCchH-------HHhHHHHhhcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCccCCCCCccC
Q 012276 73 LLWLTGGPGCS-------AFSGLAYEIGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYARTPHASQTG 145 (467)
Q Consensus 73 ~lWlnGGPG~S-------S~~g~~~E~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~~~~~~~~~~ 145 (467)
||++-|--|+- |...+....||++=.. -.+||++. +-.-|| ..=-||-- ..+.
T Consensus 92 VLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~---------~~d~~~~~----DFFaVD--FnEe~tAm-----~G~~ 151 (973)
T KOG3724|consen 92 VLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTE---------DRDNPFSF----DFFAVD--FNEEFTAM-----HGHI 151 (973)
T ss_pred EEEecCCCCchHHHHHHHHHHhhhhcCCchhhhh---------cccCcccc----ceEEEc--ccchhhhh-----ccHh
Confidence 56777777753 4456667789988332 14588776 333344 01111110 1246
Q ss_pred hhHhHHHHHHHHHHHHH---hCCCCC---CCCeEEEecccCCccHHHHH
Q 012276 146 DFKQVHHLDQFLRKWLM---DHPEFI---SNPFYVGGDSYSGITVPALV 188 (467)
Q Consensus 146 ~~~~a~d~~~fL~~f~~---~fp~~~---~~~~yi~GESYgG~yvP~la 188 (467)
..+.++.+.++++--+. .-+|++ ...+.|.|+||||.-+-..+
T Consensus 152 l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~ 200 (973)
T KOG3724|consen 152 LLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATL 200 (973)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHH
Confidence 66778888877765554 345565 44599999999997654433
No 219
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=31.23 E-value=1e+02 Score=29.83 Aligned_cols=45 Identities=24% Similarity=0.344 Sum_probs=32.0
Q ss_pred CCCeEEEecccCCccHHHHHHHHHhccccCCCccee--ceeeEecCCccCch
Q 012276 169 SNPFYVGGDSYSGITVPALVQRISNENEEDIKPLIN--LQGYILGNPRTDMV 218 (467)
Q Consensus 169 ~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~in--LkGi~igng~i~p~ 218 (467)
+.++.|+|.|=||+= -..|..+...- .+.++ |.|.++|.+..|..
T Consensus 70 ~~~v~l~GySqGG~A-a~~AA~l~~~Y----ApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 70 SSRVALWGYSQGGQA-ALWAAELAPSY----APELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred CCCEEEEeeCccHHH-HHHHHHHhHHh----CcccccceeEEeccCCccCHH
Confidence 568999999977654 34454553321 35688 99999999988764
No 220
>PRK14745 RepA leader peptide Tap; Provisional
Probab=31.18 E-value=61 Score=18.44 Aligned_cols=21 Identities=29% Similarity=0.491 Sum_probs=10.8
Q ss_pred chhhH-HHHHH-HHHHhhccCCC
Q 012276 3 MAKLC-FSLLL-LLQLCMQPAAS 23 (467)
Q Consensus 3 ~~~~~-~~~~~-~~~~~~~~~~~ 23 (467)
|+|.. .+|+| +++.|-.++..
T Consensus 1 mlrk~qylfl~hlllpcnisagr 23 (26)
T PRK14745 1 MLRKFQYLFLWHLLLPCIVSAGR 23 (26)
T ss_pred ChHHHHHHHHHHHHhhccccccc
Confidence 34443 56666 45555555543
No 221
>PTZ00333 triosephosphate isomerase; Provisional
Probab=31.18 E-value=1.1e+02 Score=29.14 Aligned_cols=59 Identities=17% Similarity=0.424 Sum_probs=43.4
Q ss_pred HhHHHHHHHHHHHHHh-CCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCc
Q 012276 148 KQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p 217 (467)
+.++++..++++++.. +..-.....-|. |||---|.=+..+.... ++.|+.||.+.+++
T Consensus 183 e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~~--------~vDG~LvG~asl~~ 242 (255)
T PTZ00333 183 EQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQP--------DIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcCC--------CCCEEEEehHhhhh
Confidence 5678889999998853 432222334444 89999999999987753 49999999988764
No 222
>PRK06762 hypothetical protein; Provisional
Probab=31.15 E-value=27 Score=30.31 Aligned_cols=21 Identities=19% Similarity=0.344 Sum_probs=15.1
Q ss_pred CEEEEECCCCchH--HHhHHHHh
Q 012276 71 PLLLWLTGGPGCS--AFSGLAYE 91 (467)
Q Consensus 71 Pl~lWlnGGPG~S--S~~g~~~E 91 (467)
|.+||+.|.|||- .+.-.+.+
T Consensus 2 ~~li~i~G~~GsGKST~A~~L~~ 24 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIAKQLQE 24 (166)
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 7899999999885 44444433
No 223
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=30.38 E-value=87 Score=27.85 Aligned_cols=84 Identities=14% Similarity=0.214 Sum_probs=50.4
Q ss_pred ceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCC
Q 012276 121 SILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIK 200 (467)
Q Consensus 121 nllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~ 200 (467)
++--|+-|+..+.. .|..+..+.++++.+.|+++..+-| +.++.|+|-|=|+.-+-..+.. ......
T Consensus 41 ~~~~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~----~~l~~~ 107 (179)
T PF01083_consen 41 AVQGVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG----DGLPPD 107 (179)
T ss_dssp EEEE--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH----TTSSHH
T ss_pred EEEecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh----ccCChh
Confidence 33346667666652 2334566788889999999988888 4589999999998777666655 100001
Q ss_pred cceecee-eEecCCccCc
Q 012276 201 PLINLQG-YILGNPRTDM 217 (467)
Q Consensus 201 ~~inLkG-i~igng~i~p 217 (467)
..-++.+ +.+|||.-.+
T Consensus 108 ~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 108 VADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHHEEEEEEES-TTTBT
T ss_pred hhhhEEEEEEecCCcccC
Confidence 1223566 5778877643
No 224
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=30.34 E-value=84 Score=30.63 Aligned_cols=70 Identities=16% Similarity=0.116 Sum_probs=39.7
Q ss_pred ChhHhHHHHHHHHHHHHHhCCC-CCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCchh
Q 012276 145 GDFKQVHHLDQFLRKWLMDHPE-FISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVV 219 (467)
Q Consensus 145 ~~~~~a~d~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~~ 219 (467)
+.++-++|+.+.++-+-..... ....++.|.|+|=|..=+-+...+-.... ..-.++|+|+..|+-|.+.
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~-----~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSP-----SRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT--------CCCEEEEEEEEE---TTS
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccc-----cccceEEEEEeCCCCChhH
Confidence 4455577776666655444322 33568999999999877766665443211 1345999999999988764
No 225
>PRK14565 triosephosphate isomerase; Provisional
Probab=30.28 E-value=1.1e+02 Score=28.79 Aligned_cols=52 Identities=15% Similarity=0.278 Sum_probs=39.9
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
+.+++..++++++. ...-|. |||---|.-+..+.+.. ++.|+.||.+.+++.
T Consensus 174 e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~~--------~iDG~LvG~asl~~~ 225 (237)
T PRK14565 174 DAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSIN--------QLSGVLVGSASLDVD 225 (237)
T ss_pred HHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcCC--------CCCEEEEechhhcHH
Confidence 55777888998862 123333 99999999999988753 399999999999875
No 226
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=30.22 E-value=22 Score=34.22 Aligned_cols=62 Identities=18% Similarity=0.225 Sum_probs=43.5
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
+.+||+..|+.-.... .+...-.+|+ -.+=|++.|.++|=||-.+||+...+-|+
T Consensus 219 ~c~vLlvvG~~Sp~~~--~vv~~ns~Ld-----------------------p~~ttllkv~dcGglV~eEqP~klaea~~ 273 (283)
T PF03096_consen 219 GCPVLLVVGDNSPHVD--DVVEMNSKLD-----------------------PTKTTLLKVADCGGLVLEEQPGKLAEAFK 273 (283)
T ss_dssp CS-EEEEEETTSTTHH--HHHHHHHHS------------------------CCCEEEEEETT-TT-HHHH-HHHHHHHHH
T ss_pred CCCeEEEEecCCcchh--hHHHHHhhcC-----------------------cccceEEEecccCCcccccCcHHHHHHHH
Confidence 4899999998743322 2344445553 14678999999999999999999999999
Q ss_pred HHHcCCC
Q 012276 460 RWINHDP 466 (467)
Q Consensus 460 ~fl~~~~ 466 (467)
-||+|.-
T Consensus 274 lFlQG~G 280 (283)
T PF03096_consen 274 LFLQGMG 280 (283)
T ss_dssp HHHHHTT
T ss_pred HHHccCC
Confidence 9998753
No 227
>PRK03995 hypothetical protein; Provisional
Probab=30.21 E-value=92 Score=29.80 Aligned_cols=48 Identities=13% Similarity=-0.043 Sum_probs=32.6
Q ss_pred cChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhc
Q 012276 144 TGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (467)
Q Consensus 144 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 194 (467)
+.++.+++-+.+.+...+..-+.-..+++.-+| ||||+|.+...+++.
T Consensus 156 W~d~~a~~~vA~avl~~l~~~~~~~~~~~iGiG---GgHYapr~T~~~l~~ 203 (267)
T PRK03995 156 WKNERAGEILAEAVIEVLDSIEYEKFKPAIGIG---GGHYAPKFTKLALES 203 (267)
T ss_pred hCCcHHHHHHHHHHHHHHhcccccCCCEEEEEC---CCCccHHHHHHHhhC
Confidence 456677788888888876532211233556667 999999999877654
No 228
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=30.01 E-value=47 Score=23.48 Aligned_cols=22 Identities=18% Similarity=0.425 Sum_probs=19.0
Q ss_pred HhHHHHHHHHHHHHHhCCCCCC
Q 012276 148 KQVHHLDQFLRKWLMDHPEFIS 169 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~ 169 (467)
++-+++++.|+.|++.+|.|-.
T Consensus 5 eiPe~L~~~m~~fie~hP~WDQ 26 (57)
T PF10929_consen 5 EIPEDLHQAMKDFIETHPNWDQ 26 (57)
T ss_pred cccHHHHHHHHHHHHcCCCchH
Confidence 4567799999999999999965
No 229
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=29.90 E-value=39 Score=25.98 Aligned_cols=26 Identities=27% Similarity=0.498 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCeEEEeccc
Q 012276 152 HLDQFLRKWLMDHPEFISNPFYVGGDSY 179 (467)
Q Consensus 152 d~~~fL~~f~~~fp~~~~~~~yi~GESY 179 (467)
|++++.+.|+-.+ |-.+.|.+.|+||
T Consensus 8 dIYDAvRaflLr~--Y~~KrfIV~g~S~ 33 (100)
T PF07389_consen 8 DIYDAVRAFLLRH--YYDKRFIVYGRSN 33 (100)
T ss_pred hHHHHHHHHHHHH--HccceEEEecchH
Confidence 4788888887665 4466899999998
No 230
>COG0218 Predicted GTPase [General function prediction only]
Probab=29.71 E-value=1e+02 Score=28.02 Aligned_cols=63 Identities=22% Similarity=0.324 Sum_probs=39.3
Q ss_pred CCCCCEEEEECCCC--chHHHhHHHHh-hcCeEEeccCCCCCCCccccCCCCcccccceeeecCCccccccCc
Q 012276 67 PKEDPLLLWLTGGP--GCSAFSGLAYE-IGPVNFNTVEYNGSLPTLRLNPYSWTKEASILFVDSPVGTGFSYA 136 (467)
Q Consensus 67 ~~~~Pl~lWlnGGP--G~SS~~g~~~E-~GP~~~~~~~~~~~~~~l~~N~~sW~~~anllfIDqPvGtGfSy~ 136 (467)
|.++..=|-|-|.- |=||++-.+.- -+=-+.... .| .+-..|-+.|.+. +.+||-| |-||..+
T Consensus 20 P~~~~~EIaF~GRSNVGKSSlIN~l~~~k~LArtSkt--PG--rTq~iNff~~~~~--~~lVDlP-GYGyAkv 85 (200)
T COG0218 20 PEDDLPEIAFAGRSNVGKSSLINALTNQKNLARTSKT--PG--RTQLINFFEVDDE--LRLVDLP-GYGYAKV 85 (200)
T ss_pred CCCCCcEEEEEccCcccHHHHHHHHhCCcceeecCCC--CC--ccceeEEEEecCc--EEEEeCC-CcccccC
Confidence 55555455555654 88998755542 222222221 12 3566788888887 8899999 8888754
No 231
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.69 E-value=1.1e+02 Score=28.83 Aligned_cols=65 Identities=20% Similarity=0.273 Sum_probs=46.2
Q ss_pred cceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhc
Q 012276 120 ASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 194 (467)
..++=|+-| |=|==+.. ...++.++.|+.+...|+- -+..+|+-++|+|+||+.+=.+|.++.++
T Consensus 34 iel~avqlP-GR~~r~~e---p~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~ 98 (244)
T COG3208 34 IELLAVQLP-GRGDRFGE---PLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERA 98 (244)
T ss_pred hheeeecCC-CcccccCC---cccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHc
Confidence 457778877 76633322 2346666677766665542 24577999999999999999999888765
No 232
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=29.51 E-value=1.5e+02 Score=28.00 Aligned_cols=59 Identities=17% Similarity=0.339 Sum_probs=43.5
Q ss_pred HhHHHHHHHHHHHHHh-CCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 148 KQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
+.++++.+|+++++.. +.+- ...+-|. |||---|.=+..+.... ++.|+.||.+.+++.
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~-~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 180 EQAQEVHAFIRAVLAELYGEV-AEKVRIL---YGGSVKPDNAAELMAQP--------DIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHhcccc-cCCceEE---EcCCCCHHHHHHHhcCC--------CCCEEEEeeeeechH
Confidence 4567789999998853 3311 2234444 99999999999987753 499999999998764
No 233
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=28.63 E-value=67 Score=32.54 Aligned_cols=36 Identities=25% Similarity=0.708 Sum_probs=26.8
Q ss_pred ceeeeeEEeCCCCCeeEEEEEeecCCCCCCCCEE-EEECC
Q 012276 40 ELETGYVGVGESEEAQLFYYFVKSDKNPKEDPLL-LWLTG 78 (467)
Q Consensus 40 ~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~Pl~-lWlnG 78 (467)
....|||+.+. .+++.. ..|+.....+.||| +||.|
T Consensus 199 ~~k~GfLTmDq--tRkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 199 TYKSGFLTMDQ--TRKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred ccccceeeEcc--ccceEE-EeccCCCccCCCceeeEecC
Confidence 35799999986 567777 67766555666776 99996
No 234
>TIGR03475 tap_IncFII_lead RepA leader peptide Tap. This protein is a translated leader peptide that actis in the regulation of the expression of the plasmid replication protein RepA in incF2 group plasmids.
Probab=28.17 E-value=77 Score=18.18 Aligned_cols=21 Identities=29% Similarity=0.411 Sum_probs=11.8
Q ss_pred chhhH-HHHHH-HHHHhhccCCC
Q 012276 3 MAKLC-FSLLL-LLQLCMQPAAS 23 (467)
Q Consensus 3 ~~~~~-~~~~~-~~~~~~~~~~~ 23 (467)
|.|.+ -+||| +++.|-.++..
T Consensus 1 M~rKvQ~~FLc~~LL~cniSAg~ 23 (26)
T TIGR03475 1 MLRKVQYLFLCHLLLPCNISAGR 23 (26)
T ss_pred CchhHHHHHHHHHHhhhcccccc
Confidence 33443 56677 46666666553
No 235
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=27.49 E-value=34 Score=29.86 Aligned_cols=27 Identities=26% Similarity=0.481 Sum_probs=16.6
Q ss_pred CCEEEEECCCCchH------HHhHHHHhhcCeE
Q 012276 70 DPLLLWLTGGPGCS------AFSGLAYEIGPVN 96 (467)
Q Consensus 70 ~Pl~lWlnGGPG~S------S~~g~~~E~GP~~ 96 (467)
+|.||||.|=||+- .+.-.+.+.|+-.
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~ 33 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKV 33 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-E
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcE
Confidence 58999999999864 2233445555533
No 236
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=26.87 E-value=63 Score=29.26 Aligned_cols=56 Identities=16% Similarity=0.207 Sum_probs=37.1
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCcccCCCCCcHHHHHHHH
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~mi~ 459 (467)
-..++|.+|+.|-++.. ...|+|... ..++.+++.+|.|+-.-.-...+-. +.
T Consensus 149 P~~~lvi~g~~Ddvv~l------~~~l~~~~~--------------------~~~~~i~i~~a~HFF~gKl~~l~~~-i~ 201 (210)
T COG2945 149 PSPGLVIQGDADDVVDL------VAVLKWQES--------------------IKITVITIPGADHFFHGKLIELRDT-IA 201 (210)
T ss_pred CCCceeEecChhhhhcH------HHHHHhhcC--------------------CCCceEEecCCCceecccHHHHHHH-HH
Confidence 47899999999954444 444444322 4578899999999987666544443 34
Q ss_pred HHH
Q 012276 460 RWI 462 (467)
Q Consensus 460 ~fl 462 (467)
.|+
T Consensus 202 ~~l 204 (210)
T COG2945 202 DFL 204 (210)
T ss_pred HHh
Confidence 454
No 237
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.98 E-value=1.3e+02 Score=30.16 Aligned_cols=66 Identities=17% Similarity=0.252 Sum_probs=43.6
Q ss_pred HhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 148 KQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
....+|.++|+..-+.-| -..+||.+||.|.-.+-....++.-++.. .....++=+++-.|=+|-.
T Consensus 172 ~Sr~aLe~~lr~La~~~~---~~~I~ilAHSMGtwl~~e~LrQLai~~~~--~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 172 YSRPALERLLRYLATDKP---VKRIYLLAHSMGTWLLMEALRQLAIRADR--PLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred hhHHHHHHHHHHHHhCCC---CceEEEEEecchHHHHHHHHHHHhccCCc--chhhhhhheEeeCCCCChh
Confidence 344445555555433333 35799999999998877777777665432 1345588889888887764
No 238
>COG0221 Ppa Inorganic pyrophosphatase [Energy production and conversion]
Probab=25.48 E-value=1.6e+02 Score=26.04 Aligned_cols=29 Identities=31% Similarity=0.358 Sum_probs=25.2
Q ss_pred cccCCCCcccccceeeecCCccccccCcc
Q 012276 109 LRLNPYSWTKEASILFVDSPVGTGFSYAR 137 (467)
Q Consensus 109 l~~N~~sW~~~anllfIDqPvGtGfSy~~ 137 (467)
-+.+.|-+.+.+..+.||+|..+++.|..
T Consensus 24 ~s~~KyE~dk~~~~~~vdR~l~~~~~YP~ 52 (171)
T COG0221 24 GSNIKYEVDKETGRLLVDRPLKTPMGYPV 52 (171)
T ss_pred CCccceEEeeecCceeeeecCCCCCcCCc
Confidence 34589999999999999999999999854
No 239
>cd00412 pyrophosphatase Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers.
Probab=25.35 E-value=2.4e+02 Score=24.55 Aligned_cols=44 Identities=11% Similarity=0.030 Sum_probs=31.0
Q ss_pred hHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhc
Q 012276 147 FKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (467)
Q Consensus 147 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 194 (467)
++....+.+-|+.||+.+..+.+.+..-. +|..-+.-|.+++++
T Consensus 109 ~Dl~~~~l~~I~~fF~~YK~le~~k~~~~----~g~~~~~~A~~~I~~ 152 (155)
T cd00412 109 SDVPPHLLDEIKHFFEHYKDLEGKKEVKV----AGWKDKEEALKIIKE 152 (155)
T ss_pred HHCCHHHHHHHHHHHHHhcccCCCCceEE----CcCcCHHHHHHHHHH
Confidence 34556788999999999988876443222 367777888777654
No 240
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=25.15 E-value=39 Score=36.07 Aligned_cols=41 Identities=7% Similarity=-0.100 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhCCCCC-CCCeEEEecccCCccHHHHHHHH
Q 012276 151 HHLDQFLRKWLMDHPEFI-SNPFYVGGDSYSGITVPALVQRI 191 (467)
Q Consensus 151 ~d~~~fL~~f~~~fp~~~-~~~~yi~GESYgG~yvP~la~~i 191 (467)
++.+.-|+..++..-+.. ++++.|+|||+||.++-+|-..+
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 334444555554322223 46899999999999988877653
No 241
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=24.79 E-value=68 Score=29.71 Aligned_cols=26 Identities=15% Similarity=0.452 Sum_probs=21.8
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHh
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKS 405 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~ 405 (467)
+++++|++|+.|..|+....++.++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q 194 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQ 194 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHH
Confidence 57889999999999999987766654
No 242
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=24.76 E-value=28 Score=22.92 Aligned_cols=14 Identities=21% Similarity=0.192 Sum_probs=12.2
Q ss_pred ccCcHHHHHhcCCc
Q 012276 333 WDNDHNVRKALHIR 346 (467)
Q Consensus 333 ylN~~~Vk~aL~v~ 346 (467)
-|++||||++|++-
T Consensus 19 ~l~DpdvqrgL~~l 32 (42)
T PF07849_consen 19 ALRDPDVQRGLGFL 32 (42)
T ss_pred HHcCHHHHHHHHHH
Confidence 58999999999863
No 243
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=24.51 E-value=77 Score=28.67 Aligned_cols=40 Identities=23% Similarity=0.497 Sum_probs=21.0
Q ss_pred ceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHh
Q 012276 121 SILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMD 163 (467)
Q Consensus 121 nllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~ 163 (467)
++|++|+|-++|..+.... ..++....++..+++..++..
T Consensus 2 dliitDPPY~~~~~~~~~~---~~~~~~~~~~y~~~~~~~~~~ 41 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNYF---DYGDNKNHEEYLEWMEEWLKE 41 (231)
T ss_dssp EEEEE---TSSSCS--------CSCHCCHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchhh---hccCCCCHHHHHHHHHHHHHH
Confidence 7899999999999862211 123333355566677666643
No 244
>PF12532 DUF3732: Protein of unknown function (DUF3732); InterPro: IPR022205 This domain family is found in bacteria and eukaryotes, and is typically between 180 and 198 amino acids in length. There is a conserved DQP sequence motif.
Probab=24.24 E-value=1.1e+02 Score=27.74 Aligned_cols=45 Identities=20% Similarity=0.346 Sum_probs=30.7
Q ss_pred cceeeecCCccccccCccCC-----CCC--ccChhHhHHHHHHHHHHHHHhC
Q 012276 120 ASILFVDSPVGTGFSYARTP-----HAS--QTGDFKQVHHLDQFLRKWLMDH 164 (467)
Q Consensus 120 anllfIDqPvGtGfSy~~~~-----~~~--~~~~~~~a~d~~~fL~~f~~~f 164 (467)
-+.|++|||.-|=|.-.... ... ..+|..+...++.+|-.|.+..
T Consensus 101 P~fL~lDQPSQvYfp~~~~~~~~~~~~~~~~d~D~~aV~~~F~~L~~~~~~~ 152 (193)
T PF12532_consen 101 PSFLFLDQPSQVYFPSRDKSEDFDEEELRERDEDIAAVRKMFSLLADFIKEI 152 (193)
T ss_pred CCeeeecCCCcCcCCCcccccccchhhccccchHHHHHHHHHHHHHHHHHHh
Confidence 38999999988877761111 111 2456677778888999888753
No 245
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=24.05 E-value=55 Score=33.69 Aligned_cols=46 Identities=11% Similarity=0.021 Sum_probs=32.9
Q ss_pred HhHHHHHHHHHHHHHh-CCCCCCCCeEEEecccCCccHHHHHHHHHh
Q 012276 148 KQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISN 193 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~ 193 (467)
+..++.+.-|+..++. +.....+++.|.+||.||.|+-++-...-+
T Consensus 159 e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 159 EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccc
Confidence 3455566677777765 333334899999999999999988865533
No 246
>COG1647 Esterase/lipase [General function prediction only]
Probab=23.48 E-value=4.1e+02 Score=24.80 Aligned_cols=38 Identities=13% Similarity=0.049 Sum_probs=30.6
Q ss_pred CCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCchh
Q 012276 170 NPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVV 219 (467)
Q Consensus 170 ~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~~ 219 (467)
..++++|-|.||...-.+|.+ .++|+|+.-++-+....
T Consensus 85 ~eI~v~GlSmGGv~alkla~~------------~p~K~iv~m~a~~~~k~ 122 (243)
T COG1647 85 DEIAVVGLSMGGVFALKLAYH------------YPPKKIVPMCAPVNVKS 122 (243)
T ss_pred CeEEEEeecchhHHHHHHHhh------------CCccceeeecCCccccc
Confidence 369999999999988888753 45999999888777543
No 247
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=22.69 E-value=2.4e+02 Score=26.09 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=36.0
Q ss_pred CccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCc
Q 012276 142 SQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPR 214 (467)
Q Consensus 142 ~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~ 214 (467)
+.++..+-|...+..+ ..|.. ...+|++.+||||.--..+..+.-+.++ +..|++.+..
T Consensus 168 yirt~veh~~yvw~~~-----v~pa~-~~sv~vvahsyGG~~t~~l~~~f~~d~~--------v~aialTDs~ 226 (297)
T KOG3967|consen 168 YIRTPVEHAKYVWKNI-----VLPAK-AESVFVVAHSYGGSLTLDLVERFPDDES--------VFAIALTDSA 226 (297)
T ss_pred hccchHHHHHHHHHHH-----hcccC-cceEEEEEeccCChhHHHHHHhcCCccc--------eEEEEeeccc
Confidence 3445555555554433 33433 3479999999999877666666544432 5666665543
No 248
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=22.67 E-value=1.7e+02 Score=32.80 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=25.0
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcC
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLN 407 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~ 407 (467)
+++||+.+|..|..++..++.++.+.|+
T Consensus 455 kvPvLlIhGw~D~~V~~~~s~~ly~aL~ 482 (767)
T PRK05371 455 KASVLVVHGLNDWNVKPKQVYQWWDALP 482 (767)
T ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHHH
Confidence 6999999999999999999888887763
No 249
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=22.57 E-value=89 Score=30.02 Aligned_cols=50 Identities=26% Similarity=0.509 Sum_probs=34.2
Q ss_pred ccccceeeecCCccccccCccCCCCCccChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCcc
Q 012276 117 TKEASILFVDSPVGTGFSYARTPHASQTGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGIT 183 (467)
Q Consensus 117 ~~~anllfIDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 183 (467)
+..+-||-||=|+|+|-|. .|+++.+-|- |..||+++--.+|+ .|||+-.
T Consensus 68 ~enSkvI~VeGnI~sGK~k-------------lAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~D~ 117 (393)
T KOG3877|consen 68 HENSKVIVVEGNIGSGKTK-------------LAKELAEQLG--FVHFPEFRMDDIYV--DSYGNDL 117 (393)
T ss_pred cccceEEEEeCCcccCchh-------------HHHHHHHHhC--Ccccccccccceee--cccCccc
Confidence 4447799999999999773 2344444332 36899987656666 6898854
No 250
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=21.77 E-value=2.4e+02 Score=30.52 Aligned_cols=59 Identities=17% Similarity=0.220 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHhCCCCCC-CCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCchhh
Q 012276 150 VHHLDQFLRKWLMDHPEFIS-NPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMVVE 220 (467)
Q Consensus 150 a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~~~ 220 (467)
-+||.+.-+...+ ..|.+ ..+++.|-|-||..+-+++..=-+ -++||+.--|++|+...
T Consensus 508 f~DFIa~a~~Lv~--~g~~~~~~i~a~GGSAGGmLmGav~N~~P~----------lf~~iiA~VPFVDvltT 567 (682)
T COG1770 508 FTDFIAAARHLVK--EGYTSPDRIVAIGGSAGGMLMGAVANMAPD----------LFAGIIAQVPFVDVLTT 567 (682)
T ss_pred HHHHHHHHHHHHH--cCcCCccceEEeccCchhHHHHHHHhhChh----------hhhheeecCCccchhhh
Confidence 3445444444332 23444 369999999999888777743222 19999999999998643
No 251
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=21.59 E-value=1.4e+02 Score=30.27 Aligned_cols=48 Identities=13% Similarity=0.191 Sum_probs=38.3
Q ss_pred cChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecccCCccHHHHHHHHHhc
Q 012276 144 TGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDSYSGITVPALVQRISNE 194 (467)
Q Consensus 144 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 194 (467)
++.+++|+|+.+.++.+ .+ +++.+++.+.|-|+|.--.|.+-.++...
T Consensus 303 rtPe~~a~Dl~r~i~~y-~~--~w~~~~~~liGySfGADvlP~~~n~L~~~ 350 (456)
T COG3946 303 RTPEQIAADLSRLIRFY-AR--RWGAKRVLLIGYSFGADVLPFAYNRLPPA 350 (456)
T ss_pred CCHHHHHHHHHHHHHHH-HH--hhCcceEEEEeecccchhhHHHHHhCCHH
Confidence 57889999988777644 33 57788999999999999999988777544
No 252
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=21.16 E-value=49 Score=25.34 Aligned_cols=12 Identities=50% Similarity=0.888 Sum_probs=8.1
Q ss_pred ceeeecCCcccc
Q 012276 121 SILFVDSPVGTG 132 (467)
Q Consensus 121 nllfIDqPvGtG 132 (467)
+.|.||-|.|||
T Consensus 2 D~LiiD~PPGTg 13 (81)
T PF10609_consen 2 DYLIIDLPPGTG 13 (81)
T ss_dssp CEEEEE--SCSS
T ss_pred CEEEEeCCCCCC
Confidence 568889998887
No 253
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=20.84 E-value=1.8e+02 Score=31.67 Aligned_cols=60 Identities=17% Similarity=0.283 Sum_probs=44.5
Q ss_pred HhHHHHHHHHHHHHHh-CCCCCCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCch
Q 012276 148 KQVHHLDQFLRKWLMD-HPEFISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDMV 218 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p~ 218 (467)
+.|+++..+|++++.. +..-....+=|. |||---|.=+..|.... ++.|+.||..-+++.
T Consensus 575 e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------diDG~LVGgASL~~~ 635 (645)
T PRK13962 575 EQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP--------DIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEeehHhcCHH
Confidence 5678899999999853 322212233333 99999999999998764 499999999888774
No 254
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=20.79 E-value=2.6e+02 Score=25.24 Aligned_cols=45 Identities=24% Similarity=0.275 Sum_probs=29.8
Q ss_pred CCeEEEEeCCCccccCchhHHHHHHhcCCCCCCCccceeeCCeeeeEEEEEecceEEEEEcCCccc
Q 012276 380 GYRSLIYSGDHDMLIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHT 445 (467)
Q Consensus 380 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~~Ltf~~V~~AGHm 445 (467)
+.+|++..|..|..++....+...+.|+= .+....+.+..||+|-
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~---------------------~~~~~~~~~y~ga~Hg 189 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKA---------------------AGVDVEVHVYPGAGHG 189 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHC---------------------TTTTEEEEEETT--TT
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHh---------------------cCCcEEEEECCCCccc
Confidence 68999999999999999988888887720 1234666777788885
No 255
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=20.78 E-value=69 Score=29.03 Aligned_cols=27 Identities=11% Similarity=0.003 Sum_probs=23.5
Q ss_pred CeEEEEeCCCccccCchhHHHHHHhcC
Q 012276 381 YRSLIYSGDHDMLIPFLGTEAWIKSLN 407 (467)
Q Consensus 381 irVLiy~Gd~D~i~n~~Gt~~~i~~L~ 407 (467)
-+++|.+|..|.++|....+...+.|+
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 457899999999999999998888774
No 256
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=20.67 E-value=1.1e+02 Score=29.13 Aligned_cols=62 Identities=21% Similarity=0.189 Sum_probs=38.8
Q ss_pred HhHHHHHHHHHHHHHh-CCCC---CCCCeEEEecccCCccHHHHHHHHHhccccCCCcceeceeeEecCCccCc
Q 012276 148 KQVHHLDQFLRKWLMD-HPEF---ISNPFYVGGDSYSGITVPALVQRISNENEEDIKPLINLQGYILGNPRTDM 217 (467)
Q Consensus 148 ~~a~d~~~fL~~f~~~-fp~~---~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~igng~i~p 217 (467)
+.|..+.+||.+=++. -|+= .-.++-++|+|-||+-+=++|.... ..+++..++-.+|+-..
T Consensus 94 ~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a--------~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 94 KSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA--------TSLKFSALIGIDPVAGT 159 (307)
T ss_pred HHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc--------ccCchhheecccccCCC
Confidence 4445555555543332 1211 1236999999999999888886443 24668888877776443
No 257
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [].; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.
Probab=20.01 E-value=92 Score=26.42 Aligned_cols=51 Identities=18% Similarity=0.340 Sum_probs=35.8
Q ss_pred ceeeecCCccccccCccCCCCCc-cChhHhHHHHHHHHHHHHHhCCCCCCCCeEEEecc
Q 012276 121 SILFVDSPVGTGFSYARTPHASQ-TGDFKQVHHLDQFLRKWLMDHPEFISNPFYVGGDS 178 (467)
Q Consensus 121 nllfIDqPvGtGfSy~~~~~~~~-~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GES 178 (467)
=||=|| |.||+.-....... -+|+.+.+-|.+.-+..++.++ ...+..|+|
T Consensus 22 ivvRiD---G~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~----~~~~aY~~S 73 (135)
T PF04446_consen 22 IVVRID---GRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFP----DIVLAYGQS 73 (135)
T ss_dssp EEEEEE---ETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSS----SEEEEEEET
T ss_pred EEEEEe---CcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCC----CcEEEEEcC
Confidence 378899 99999865442232 2577788888888888888886 267777887
Done!